BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007282
(609 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/614 (77%), Positives = 528/614 (85%), Gaps = 12/614 (1%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPRPKVHSFSKVLTASDTSTHGGFSV 59
+AEQ+TDEVYAQITLLPE Q EPT+PDP PA+ S RP VHSF KVLTASDTSTHGGFSV
Sbjct: 86 LAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEPSRRPAVHSFCKVLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LRKHATECLP LDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR
Sbjct: 146 LRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+FVFLRGENGEL VGVR LARQQSSMPSSVISSQSMHLGVLATASHAVATQT+FV
Sbjct: 206 LVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSQSMHLGVLATASHAVATQTLFV 265
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
VYYKPRTSQFIISLNKYLEA+NNKF+VGMR+KMRFEGEDSPERRFSGT+VGVEDFSPHW
Sbjct: 266 VYYKPRTSQFIISLNKYLEAINNKFSVGMRFKMRFEGEDSPERRFSGTIVGVEDFSPHWL 325
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
DSKWR LKVQWDEPASI RPD+VSPWEIEPF ASA N+ QPV KNKRPR +EVP LD
Sbjct: 326 DSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSASAPSNISQPVPLKNKRPRPPIEVPTLD 385
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
L S AS W++RL QSH+LTQLSVTAE KR +NH+ WHHK +D +S+SN +SRTQ++G W
Sbjct: 386 LSSTASPLWNSRLTQSHDLTQLSVTAEGKRNENHIMWHHKQNDINSHSNSISRTQTEGGW 445
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
L+SP V SQ LFQE +D+K++S WP SG+STP SK ND++L+ VE GRK++ TS
Sbjct: 446 LSSPLVNVSQHLFQEVTEDSKSVSNWPVVSGYSTPQSSK-LNDSILDPVEKGRKSDVATS 504
Query: 420 CRLFGIELINHATSSAPSEKVP-----VSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 474
RLFGIELINH+ SS P+EK P VSS TTE H++ST+S AADSD KSDI+ KE+
Sbjct: 505 YRLFGIELINHSASSLPTEKAPAQPLSVSSGTTEAHVVSTLS-AADSDQKSDIS---KER 560
Query: 475 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
K EQ+ VSPK++QS+QS S RSRTKVQMQGVAVGRA+DLT + GY+ L+DELEEMFDI
Sbjct: 561 KPEQLHVSPKDAQSRQSS-ASTRSRTKVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDI 619
Query: 535 KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 594
KGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKM PGSKLPMFS
Sbjct: 620 KGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMMPGSKLPMFS 679
Query: 595 IEGEDILLSSDSAE 608
EGE ++SSDSA+
Sbjct: 680 TEGEGTVISSDSAD 693
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/614 (71%), Positives = 499/614 (81%), Gaps = 16/614 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTHGGFSVLR
Sbjct: 77 AEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTHGGFSVLR 136
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 137 KHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 196
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVATQT+F+VY
Sbjct: 197 AGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVATQTLFIVY 256
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPRTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG EDFSP WKDS
Sbjct: 257 YKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGEDFSPEWKDS 316
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR + P
Sbjct: 317 EWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPRSNESPVPETGS 376
Query: 302 SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD-----FSSNSNFMSRTQSD 356
+AASA W L QSH+LTQ+S TAE KR +NHV WHHK +D +SN+ +SRTQ++
Sbjct: 377 AAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGPLINSNTACVSRTQTE 436
Query: 357 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--T 414
G WL+S V SQ FQ+A +D+K++SAWPA SG+ST H SK +DT+++ G+K
Sbjct: 437 GSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTIIDPNGNGKKAVA 496
Query: 415 ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEK 474
E TSCRLFG EL+NH +SS P K GH IS +S+ DSD KSD++K KE+
Sbjct: 497 EMATSCRLFGFELMNH-SSSPPVGKA-------HGHSIS-VSSGTDSDQKSDLSKASKEQ 547
Query: 475 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+AVGRA+DLT L GYD LIDELEEMF+I
Sbjct: 548 KQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEI 607
Query: 535 KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 594
KG+L R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKLP+ S
Sbjct: 608 KGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKLPISS 667
Query: 595 IEGEDILLSSDSAE 608
+EGE +S DS E
Sbjct: 668 MEGEGTTISLDSTE 681
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/629 (70%), Positives = 502/629 (79%), Gaps = 35/629 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AEQETDEVYAQITLLPEP Q EP +PDPC + PRP VHSF KVLTASDTSTHGGFSVLR
Sbjct: 77 AEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTSTHGGFSVLR 136
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLP LDMNQ+TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 137 KHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 196
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+FVFLRG+NGEL VGVR LARQQS+MP+SVISSQSMHLGVLATASHAVATQT+F+VY
Sbjct: 197 AGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATASHAVATQTLFIVY 256
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPRTSQFII LNKYLEAV+N FAVGMR+KMRFEGEDSPERRFSGT+VG EDFSP WKDS
Sbjct: 257 YKPRTSQFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERRFSGTIVGGEDFSPEWKDS 316
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
+WRSLKVQWDEPASI RP++VSPWEIE +V+S L P + KNKRPR S E P +P
Sbjct: 317 EWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAPPGVLKNKRPR-SNESP---VP 372
Query: 302 ---------------SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSD---- 342
+AASA W L QSH+LTQ+S TAE KR +NHV WHHK +D
Sbjct: 373 GQGKFLHRFCFETGSAAASAVWHLGLTQSHDLTQMSSTAEGKRSENHVMWHHKQADIGGP 432
Query: 343 -FSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN 401
+SN+ +SRTQ++G WL+S V SQ FQ+A +D+K++SAWPA SG+ST H SK +
Sbjct: 433 LINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTS 492
Query: 402 DTLLEQVETGRK--TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAA 459
DT+++ G+K E TSCRLFG EL+NH +SS P K GH IS +S+
Sbjct: 493 DTIIDPNGNGKKAVAEMATSCRLFGFELMNH-SSSPPVGKA-------HGHSIS-VSSGT 543
Query: 460 DSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 519
DSD KSD++K KE+KQ Q VSPKE QSKQ+C ++ RSRTKVQMQG+AVGRA+DLT L
Sbjct: 544 DSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALE 603
Query: 520 GYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
GYD LIDELEEMF+IKG+L R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQ
Sbjct: 604 GYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQ 663
Query: 580 DVKKMSPGSKLPMFSIEGEDILLSSDSAE 608
DVKKMSPGSKLP+ S+EGE +S DS E
Sbjct: 664 DVKKMSPGSKLPISSMEGEGTTISLDSTE 692
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/619 (69%), Positives = 491/619 (79%), Gaps = 24/619 (3%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL+PE +Q+EP PDPC A+ PR VHSFSKVLTASDTSTHGGFSVL
Sbjct: 85 LAEQETDEVYAQITLVPESNQDEPMNPDPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVL 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHA ECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 145 RKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHAVATQT+FVV
Sbjct: 205 VAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVV 264
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHW 238
YYKPRTSQFIIS+NKYLEA+ N+F+VGMR KMRFEG+DS E +RFSGT+VGVED SPHW
Sbjct: 265 YYKPRTSQFIISVNKYLEAM-NRFSVGMRLKMRFEGDDSAETDKRFSGTIVGVEDISPHW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K KRPR E P +
Sbjct: 324 VNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPRPPSETPDV 383
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS---NFMSRTQS 355
D SAAS W A L Q+ ++ Q +V AE KR D+ WHH +D +S S N M R Q+
Sbjct: 384 DTTSAASVFWDAGLQQA-DMAQKNVLAESKRNDSTGTWHHMQTDMNSKSNSGNAMLRNQT 442
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
+G WL+SP LFQ+A DD+K++SAWP S PH S+ NND +L+QV+ K E
Sbjct: 443 EGSWLSSPHSSCPSHLFQDATDDSKSVSAWPV----SKPHSSRLNNDHVLDQVDKESKVE 498
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSS-----LTTEGHIISTISAAADSDGKSDI-AK 469
T TS RLFGI+LI+H+ +S EK + +TTEG ST++ D+ SD+
Sbjct: 499 TATSYRLFGIDLIDHSRNSPSVEKASAQAGNAPKVTTEG-CTSTLT-RTDAGHLSDVPMA 556
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
KE+KQEQ QVSPKE+QSKQ C RSRTKVQMQGVAVGRA+DLT L GYD LI+ELE
Sbjct: 557 SSKERKQEQQQVSPKETQSKQIC----RSRTKVQMQGVAVGRAVDLTMLDGYDQLINELE 612
Query: 530 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
EMFDIKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMS GSK
Sbjct: 613 EMFDIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGSK 672
Query: 590 LPMFSIEGEDILLSSDSAE 608
LP+ S+E + ++SSD+ E
Sbjct: 673 LPISSVE-DGTVISSDTTE 690
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/619 (69%), Positives = 489/619 (78%), Gaps = 23/619 (3%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL+PE SQ+EPT DPC A+ PR VHSFSKVLTASDTSTHGGFSVL
Sbjct: 85 LAEQETDEVYAQITLVPESSQDEPTNADPCTAEPPRAPVHSFSKVLTASDTSTHGGFSVL 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLP LDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 145 RKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRG+NGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHAVATQT+FVV
Sbjct: 205 VAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLFVV 264
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHW 238
YYKPRTSQFII +NKYLEA++ KF+VGMR+KMRFEG+DS E +RFSGT+VGVED SPHW
Sbjct: 265 YYKPRTSQFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFSGTIVGVEDISPHW 324
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+SKWRSLKVQWDEPA++ RPDRVSPWEIEPFVASA+ VQP + K KRPR E P +
Sbjct: 325 VNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPRPPSETPDV 384
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS---NFMSRTQS 355
D S AS W A L Q+ ++ Q +V AE K DN WHH +D +S S N M R Q+
Sbjct: 385 DTTSVASVFWDAGLQQA-DMAQKNVLAESKWNDNTGTWHHMQTDMNSKSNSGNTMLRNQT 443
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
+G WL+SP LFQ+ DD+K +SAWP S PH SK NND +L+QV+ K E
Sbjct: 444 EGSWLSSPHSSCPSHLFQDVTDDSKIVSAWPV----SKPHSSKLNNDHVLDQVDKESKVE 499
Query: 416 TGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIA-K 469
T TS RLFGI+LI+ + +S EK V V +TTEG ST+S D+ KSD++
Sbjct: 500 TATSYRLFGIDLIDPSRNSPSVEKASAQAVNVPKVTTEG-CTSTLS-RTDAGHKSDVSMA 557
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
E+KQEQ+QVSPK++QSKQ C RSRTKVQMQGVAVGRA+DLT L GY LI+ELE
Sbjct: 558 SSMERKQEQLQVSPKDTQSKQIC----RSRTKVQMQGVAVGRAVDLTMLDGYGQLINELE 613
Query: 530 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
+MF+IKGQL R KWEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMS GSK
Sbjct: 614 DMFNIKGQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGSK 673
Query: 590 LPMFSIEGEDILLSSDSAE 608
LP+ S+E + ++SSD+ E
Sbjct: 674 LPISSVE-DGTVISSDTTE 691
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/616 (67%), Positives = 479/616 (77%), Gaps = 36/616 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL+PE +QNEPT PDP + PRPK+HSF K+LTASDTSTHGGFSVL
Sbjct: 80 LAEQETDEVYAQITLVPESNQNEPTIPDPPTEELPRPKIHSFCKILTASDTSTHGGFSVL 139
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM+Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 140 RKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 199
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFL GENGEL VGVR LARQ SSMPSSVISSQSMHLGVLATASHAVATQT+FVV
Sbjct: 200 VAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVATQTLFVV 258
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHW 238
YYKPRTSQFI+S+NKYL AV+NKFAVGMR++MRFE +DS E +RFSGT+VGVED SPHW
Sbjct: 259 YYKPRTSQFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAESDKRFSGTIVGVEDISPHW 318
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+SKWRSLKVQWDEP++ITRPDRVSPWEIEPFV+SA+ VQP AK KRPR + E+P +
Sbjct: 319 ANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTKRPRPTSEIPDV 378
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
D SAAS W AR++Q+ ++TQ RI N +N+N R Q++G
Sbjct: 379 DTTSAASIFWDARMSQT-DMTQ--------RIMNS----------KTNNNATLRNQTEGS 419
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
WL+SPR + L + DD K++SAWP S P S N D +L+QVE K ET T
Sbjct: 420 WLSSPRSSYPSHLLHDTTDDGKSVSAWPV----SQPQSSILNIDRMLDQVEKDNKVETAT 475
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG-----KSDIAKEFKE 473
+ RLFGI+LI+H+ SA E +P SS G+ ++T +++ KSDI+K E
Sbjct: 476 TYRLFGIDLIDHSKKSAAVE-IP-SSHAVNGNGVTTEVSSSTLSSSDTARKSDISKASFE 533
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
+KQE QVSPKE+QSKQ C +RSRTKVQMQGVAVGRA+DL TL GYD LI ELEE+FD
Sbjct: 534 RKQEPQQVSPKETQSKQIC---SRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFD 590
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
IKGQL R WEIV+TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKM GSKLP+
Sbjct: 591 IKGQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMKSGSKLPIS 650
Query: 594 SIEGEDILLSSDSAEK 609
S E ++SSD+ E+
Sbjct: 651 SSIEEGTVISSDTTER 666
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/619 (63%), Positives = 465/619 (75%), Gaps = 20/619 (3%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VHSF K+LTASDTSTHGGFSVL
Sbjct: 147 LAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSFCKILTASDTSTHGGFSVL 206
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 207 RKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 266
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSMHLGVLATASHAV TQT+FVV
Sbjct: 267 VAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVV 326
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEAVN FAVGMR+KMRFEGEDSPERRF+GT+VG+ D SP W +
Sbjct: 327 YYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERRFTGTIVGIGDISPQWSN 386
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLK+QWDEPA+I RP+RVS W+IEPFVASA+ NL QP + K KRPR PLDL
Sbjct: 387 SKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPV-KIKRPR------PLDL 439
Query: 301 PSA----ASAP---WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 353
P A +S P W A + SH LTQL E + ++ V W K + + N S
Sbjct: 440 PVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVHWPPKPKEINGNVIHNSNC 499
Query: 354 QS-----DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV 408
S +G W +SP V S LFQ+ +D+K +S SG++T S+PNN + +QV
Sbjct: 500 GSSIGRPEGIWSSSPSVNVSLNLFQDLTEDSKTVSTRSILSGYNTSLSSRPNNGLISDQV 559
Query: 409 ETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDI 467
E G++ E CRLFGI+L N++ ++A E P + ++ IS + + AD D+
Sbjct: 560 EKGKRIEASIGCRLFGIDLTNNSKATALLEMSCPSITSSSVKGPISAVVSEADRIQNLDV 619
Query: 468 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
+K E+KQ + S KE+Q +QSC S+R+RTKVQMQGVAVGRA+DLT L GYD LI E
Sbjct: 620 SKSSNEQKQVVPEASQKETQGRQSCTPSSRTRTKVQMQGVAVGRAVDLTALEGYDELISE 679
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
LE+MF+IKG+L R KWE+V+TDDEGDMMLVGDDPW EFC MV++IFI SS++VKKMSP
Sbjct: 680 LEKMFEIKGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPR 739
Query: 588 SKLPMFSIEGEDILLSSDS 606
KL S++GE ++S DS
Sbjct: 740 CKLSTSSLDGEGTVISLDS 758
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/612 (66%), Positives = 472/612 (77%), Gaps = 31/612 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL+PE +Q EPT+PDPCPA+ PRP+VHSF KVLTASDTSTHGGFSVL
Sbjct: 79 LAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPRVHSFCKVLTASDTSTHGGFSVL 138
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLP LDM++STPTQELVAKDL G+EWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 139 RKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 198
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVATQT+FVV
Sbjct: 199 VAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLATASHAVATQTLFVV 258
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHW 238
YYKPRTSQFI+S+NKYLEA+N K VGMR+KMRFEG++SPE +RFSGT++GVED SPHW
Sbjct: 259 YYKPRTSQFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPENDKRFSGTILGVEDISPHW 318
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+S WRSLKVQWDEPAS RPDRVS WEIE +A QP + KNKRPR + EVP L
Sbjct: 319 VNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQPAVIKNKRPRQASEVPDL 378
Query: 299 -DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
D P AA W A L Q ++TQL V E KR D+ + H +H + SN+N +S Q++
Sbjct: 379 GDTPLAAPTFWDAGLTQC-DMTQLRVMTESKRSDS--SSHMRHHNSKSNNNGISMNQTEA 435
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTET 416
WL+SP QL+Q+ DDNK+I AWP S PH + NND L+QV+ K E
Sbjct: 436 SWLSSP------QLYQDTTDDNKSILAWPI----SKPHSERLNNDHFLDQVDKNINKVEA 485
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
TS RLFGI+LI+HA + +SL+ E D + +SD++K KE Q
Sbjct: 486 ATSYRLFGIDLIDHARN---------NSLSVENASGVASECKTDVNHESDLSKASKEWNQ 536
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
EQ+ VSPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+DELE+MFDIKG
Sbjct: 537 EQLLVSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKG 593
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 596
QL R KWE V+TDDEGDMMLVGDDPW EFCNMVKRIFICSSQDV K+S GSKLP+ S+
Sbjct: 594 QLQHRNKWETVFTDDEGDMMLVGDDPWPEFCNMVKRIFICSSQDVHKLSSGSKLPISSM- 652
Query: 597 GEDILLSSDSAE 608
GE I++S ++ E
Sbjct: 653 GE-IVISLNTTE 663
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/613 (65%), Positives = 469/613 (76%), Gaps = 32/613 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL+PE +Q EP +PDPCPA+ P P+VHSF KVLTASDTSTHGGFSVL
Sbjct: 78 LAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPRVHSFCKVLTASDTSTHGGFSVL 137
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLP LDM++STPTQELVAKDL GYEWRFKHIFRGQPRRHLLTTGWS FVTSKRL
Sbjct: 138 RKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLTTGWSNFVTSKRL 197
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRG NGEL VGVR +A QSSMPSSVISSQSMHLGVLATASHAVATQT+FVV
Sbjct: 198 VAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLATASHAVATQTLFVV 257
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE--RRFSGTVVGVEDFSPHW 238
YYKPR SQFI+S+NKYLEA+N K VGMR+K RFEG++SPE +RFSGT+VGVED SPHW
Sbjct: 258 YYKPRASQFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENYKRFSGTIVGVEDISPHW 317
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+S WRSLKVQWDEPAS RPDRV PWEIEP +AS Q KNKRPR + E+ L
Sbjct: 318 VNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTAAIKNKRPRQASELADL 377
Query: 299 -DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHV-AWHHKHSDFSSNSNFMSRTQSD 356
D P A W A L QS ++ +LSV AE KR D+ WHH + S++N +S Q++
Sbjct: 378 GDTPLAFPTFWDAGLTQS-DMAKLSVMAEIKRSDSSSHMWHH---NSKSSNNGISMNQTE 433
Query: 357 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTE 415
WL+SP QL+ + DD+K+ISAWP S PH + NND L+QV+ K E
Sbjct: 434 ASWLSSP-----SQLYHDTTDDSKSISAWPI----SKPHSERLNNDHFLDQVDKEINKVE 484
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TS RLFGI+LI+HA +++ S + S +T+E I D + SDI+K KE
Sbjct: 485 AATSYRLFGIDLIDHARNNSLSAE-NASGITSECKI--------DVNHVSDISKASKEWN 535
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QEQ+Q+SPKE+QSKQ C +RS TKVQMQGVAVGRA+DLTTL GYD L+DELE+MFDIK
Sbjct: 536 QEQLQLSPKETQSKQVC---SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIK 592
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSI 595
GQL R KWEIV+TDDEGDMMLVGDDPW EFC MV+RIFI SSQDV K+S GSKLP+ S+
Sbjct: 593 GQLQLRNKWEIVFTDDEGDMMLVGDDPWLEFCKMVRRIFIYSSQDVHKLSSGSKLPISSM 652
Query: 596 EGEDILLSSDSAE 608
E+I+ S D+ E
Sbjct: 653 --EEIVTSLDTTE 663
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/621 (63%), Positives = 468/621 (75%), Gaps = 27/621 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ++DEVYAQITL+PE +Q P+T +P + + KVHSF KVLTASDTSTHGGFSVL
Sbjct: 34 LAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVL 93
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 94 RKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 153
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+FVFLRGENGEL VGVR LARQQSSMPSSVISS SMHLGVLATASHAV+TQT FVV
Sbjct: 154 VAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVV 213
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPR SQFI+SL+KY+EA+NNKF VGMR+KMRFEGE+SPERRFSGT+VGV+D SPHW +
Sbjct: 214 YYKPRASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWPN 273
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSL+VQWDE ASI RPDRVSPWEIEPFVA TP++ + KNKRPR PPL++
Sbjct: 274 SEWRSLRVQWDELASIQRPDRVSPWEIEPFVA-PTPSIPHSISVKNKRPR-----PPLEI 327
Query: 301 PSAASAPWSARL---AQSH-NLTQLSVT-AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
P + ++ + + SH + TQLSV+ AE KR +NH WH+K +D N N +SRT
Sbjct: 328 PDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSVSRTAM 387
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAW--------PAHSGHSTPHPSKPNNDTLLEQ 407
+G WL S SQ Q+ IDD K+ S W AHS TP S +D + +
Sbjct: 388 EGSWLASSSGCVSQHRLQDLIDDRKSGSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQDL 447
Query: 408 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 467
E G+K E SCRLFGIELINH+ S +E+ +T I +++ S++
Sbjct: 448 GEKGKKAEASPSCRLFGIELINHSKSPVLTERAADQPNSTPNEI-------TEAEQNSNL 500
Query: 468 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
K KE+K +QV PKE Q KQ+ TS+RSRTKVQMQG+AVGRA+DLTTL GY LIDE
Sbjct: 501 PKISKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDE 560
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
LE+MFDIKG+L R KWEIV+TDDEGDMML+GD PW EFCNMV+RI+I SSQDV KM
Sbjct: 561 LEKMFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDV-KMGSV 619
Query: 588 SKLPMFSIEGEDILLSSDSAE 608
SKL M ++E E +++S+SA+
Sbjct: 620 SKLAMSALECEGTVITSESAD 640
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/621 (63%), Positives = 468/621 (75%), Gaps = 27/621 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ++DEVYAQITL+PE +Q P+T +P + + KVHSF KVLTASDTSTHGGFSVL
Sbjct: 62 LAEQDSDEVYAQITLMPEANQALPSTFEPPLIECRKTKVHSFCKVLTASDTSTHGGFSVL 121
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 122 RKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 181
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+FVFLRGENGEL VGVR LARQQSSMPSSVISS SMHLGVLATASHAV+TQT FVV
Sbjct: 182 VAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVV 241
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPR SQFI+SL+KY+EA+NNKF VGMR+KMRFEGE+SPERRFSGT+VGV+D SPHW +
Sbjct: 242 YYKPRASQFIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSPHWPN 301
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSL+VQWDE ASI RPDRVSPWEIEPFVA TP++ + KNKRPR PPL++
Sbjct: 302 SEWRSLRVQWDELASIQRPDRVSPWEIEPFVA-PTPSIPHSISVKNKRPR-----PPLEI 355
Query: 301 PSAASAPWSARL---AQSH-NLTQLSVT-AEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
P + ++ + + SH + TQLSV+ AE KR +NH WH+K +D N N +SRT
Sbjct: 356 PDSDNSTVTTLRHPGSTSHDDRTQLSVSAAELKRFENHATWHYKQTDAGGNGNSVSRTAM 415
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAW--------PAHSGHSTPHPSKPNNDTLLEQ 407
+G WL S SQ Q+ IDD K+ S W AHS TP S +D + +
Sbjct: 416 EGSWLASSSGCVSQHRLQDLIDDRKSGSVWSTVFPGQLAAHSTCPTPRSSNTKSDQVQDL 475
Query: 408 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 467
E G+K E SCRLFGIELINH+ S +E+ +T I +++ S++
Sbjct: 476 GEKGKKAEASPSCRLFGIELINHSKSPVLTERAADQPNSTPNEI-------TEAEQNSNL 528
Query: 468 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
K KE+K +QV PKE Q KQ+ TS+RSRTKVQMQG+AVGRA+DLTTL GY LIDE
Sbjct: 529 PKISKERKLGLLQVPPKEIQHKQNSSTSSRSRTKVQMQGMAVGRAVDLTTLEGYGQLIDE 588
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
LE+MFDIKG+L R KWEIV+TDDEGDMML+GD PW EFCNMV+RI+I SSQDV KM
Sbjct: 589 LEKMFDIKGELRPRNKWEIVFTDDEGDMMLMGDYPWQEFCNMVRRIYIWSSQDV-KMGSV 647
Query: 588 SKLPMFSIEGEDILLSSDSAE 608
SKL M ++E E +++S+SA+
Sbjct: 648 SKLAMSALECEGTVITSESAD 668
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/611 (61%), Positives = 438/611 (71%), Gaps = 46/611 (7%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL PE Q EPT+PD C + + VHSF K+LTASDTSTHGGFSVL
Sbjct: 98 LAEQETDEVYAQITLHPEVDQTEPTSPDQCTPEPQKRPVHSFCKILTASDTSTHGGFSVL 157
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDMNQS PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 158 RKHATECLPPLDMNQSIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 217
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLR +NGEL VGVR LARQQS MPSSVISSQSMHLGVLATASHAV TQT+FVV
Sbjct: 218 VAGDAFVFLRSDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVV 277
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFII LNKYLEAVN+ F++GMR+KMRFEGEDSPERRF GT+VGV DFSP W
Sbjct: 278 YYKPRTSQFIIGLNKYLEAVNHGFSLGMRFKMRFEGEDSPERRFMGTIVGVGDFSPEWSG 337
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLK+QWDEPA++ RPDRVSPWEIEPF ASA+ NL Q V K+KRPR P+D
Sbjct: 338 SKWRSLKIQWDEPATVQRPDRVSPWEIEPFAASASVNLPQTV-GKSKRPR------PVD- 389
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
TA D + N S+ SR +S+G W
Sbjct: 390 ----------------------TTASDNCLLN-------------GSSCSSRVRSEGIWP 414
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSC 420
SP + S LF ++ DDN+ I+ SG++ PS+ +N + EQVE G+K E C
Sbjct: 415 HSPHMDVSLSLFSDSADDNRTITTQSVISGYAPAFPSRQSNSLVHEQVEKGKKYENSVGC 474
Query: 421 RLFGIELINHATSSAPSEKVPVS-SLTTEGHIISTISA-AADSDGKSDIAKEFKEKKQEQ 478
RLFGI+LI++++++AP EK + + + G S + D D++K KE+K+
Sbjct: 475 RLFGIDLISNSSTAAPPEKESLGLKMDSNGPRGSAPAVDGTDEAQNVDVSKASKEQKEAA 534
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
+V PKE+ SK TS R+RTKVQMQGVAVGRA+DLT L GY LI ELEE+F+IKG+L
Sbjct: 535 SEVMPKETHSKPGT-TSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGEL 593
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
TR KW +V+TDDEGDMMLVGDDPW EFC MV++I I SS++ KK+ KL S+EGE
Sbjct: 594 STREKWAVVFTDDEGDMMLVGDDPWREFCKMVRKILIYSSEEAKKLKTRCKLLASSLEGE 653
Query: 599 DILLSSDSAEK 609
+ S DS +
Sbjct: 654 GAIASLDSEHR 664
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/603 (63%), Positives = 450/603 (74%), Gaps = 13/603 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF KVLTASDTSTHGGFSVL
Sbjct: 85 LADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTHGGFSVL 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 145 RKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHLGVLATASHAV TQT FVV
Sbjct: 205 SAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTTQTRFVV 264
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRT QFIISLNKYLEAVNNKF+VGMR+ M FEGEDSPERRFSGT++G D SPHW +
Sbjct: 265 YYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAVDISPHWPN 324
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S WRSL+VQWDE SI RPDRVSPW+IEP +SA L QP+ +KNKRPR + P
Sbjct: 325 SSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPI-SKNKRPR---QPTPAHD 380
Query: 301 PSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
+ + P W + LAQSH+ Q S AE ++ +N+ + HH+ +D SNS+ +SRTQ+D
Sbjct: 381 GADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTISNSSCVSRTQTD-T 439
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 416
WL+ + + + D+K + S W G T H K ++D +L+ +E+G+K ET
Sbjct: 440 WLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQILDPIESGKKGET 499
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
SCRLFGI+L NH + S + S T+G IST+S A SD KSD + E+K
Sbjct: 500 VASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-ISTLS-VAQSDPKSDNLEVSIERKS 556
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
E Q S KE Q QS + RSRTKV M G+AVGRA+DLT L GYD LIDELE+MFD++G
Sbjct: 557 ELSQASLKEIQCNQSSSANTRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEKMFDVRG 616
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK-LPMFSI 595
QL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK L +
Sbjct: 617 QLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQLTSIEV 676
Query: 596 EGE 598
EG+
Sbjct: 677 EGD 679
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/586 (60%), Positives = 438/586 (74%), Gaps = 4/586 (0%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL PE Q EP++PDPC ++P+ VH F K+LTASDTSTHGGFSVL
Sbjct: 86 LAEQETDEVYAQITLHPEADQCEPSSPDPCKPEAPKATVHWFCKILTASDTSTHGGFSVL 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDMNQ+TPTQEL+AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 146 RKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRG+NGEL GVR LARQQS +PSSVISSQSMHLGVLATASHA+ T+T+FVV
Sbjct: 206 VAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATASHALMTKTLFVV 265
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
Y KPRTSQFII L+KYLEA KF++G R++MRFEG++SPERRF+GT+V V D SP W +
Sbjct: 266 YSKPRTSQFIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERRFTGTIVEVGDLSPQWSE 325
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR-LSMEVPPLD 299
SKWRSLKVQWDE A++ RPDRVSPW+IEPFVASA NL QP + K+KRPR + + +
Sbjct: 326 SKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQP-MVKSKRPRPVEISSSEVT 384
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
SAAS+ W Q+ L + V E + + V W + + +S+S +R S+G W
Sbjct: 385 TNSAASSFWYHSSPQTTELNRGGV-PEVQTSGSQVVWPLRQKESNSSSYSSARVCSEGIW 443
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
+SP V LF+++ + +KN+ A S ++P SKPNN + +QVE G+K+++ +
Sbjct: 444 PSSPHVDVPLSLFRDSKESSKNVIAGSVLSSIASPILSKPNNVLIHDQVEKGKKSDS-SG 502
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
LFG L N+ ++ P E PV G + A +SD D++K KE+KQ +
Sbjct: 503 FWLFGCNLSNNTKTTCPQEIEPVFKTMPSGAKGPIPADAFESDQGLDVSKLSKEQKQVIL 562
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 539
+ SPKE+Q KQ S R+RTKVQMQGVAVGRA+DLT L GYDHLIDELE+MF+IKG+L
Sbjct: 563 EASPKETQGKQGLTLSTRTRTKVQMQGVAVGRAVDLTALKGYDHLIDELEKMFEIKGELR 622
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+ KW +V+TDDE DMML+GDD W +FC +VK+IFI SS +V+KM+
Sbjct: 623 PKNKWAVVFTDDENDMMLMGDDQWPDFCKLVKKIFIYSSDEVQKMN 668
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/628 (58%), Positives = 453/628 (72%), Gaps = 32/628 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ+TDEVYA I LLPE Q EPT PDP ++ P+ K HSF K+LTASDTSTHGGFSVL
Sbjct: 176 LAEQDTDEVYACIALLPESDQTEPTNPDPNISEPPKQKFHSFCKILTASDTSTHGGFSVL 235
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLP LDM Q+TPTQEL AKDLHG+EW+FKHI+RGQPRRHLLTTGWSTFV SKRL
Sbjct: 236 RKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRL 295
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVLATASHAV T+TMF+V
Sbjct: 296 VAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLV 355
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFI+ LNKYLEAVNNKF++GMR+KMRFEG+DSPERRFSGT+VGV D S W +
Sbjct: 356 YYKPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSN 415
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP + K KR R P D+
Sbjct: 416 SQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAV-KGKRSR------PADV 468
Query: 301 -PSAASAPWSARLAQSHNLTQL-SVTAEDKRIDNHVA-WHHKHSDF-------SSNSNFM 350
SAAS W S+ L+QL + TAE + +N V + D ++NS+
Sbjct: 469 SSSAASGFWYH--GSSNELSQLGAATAEVQSKENQVVPCSLRQKDIINSNPIDANNSSIS 526
Query: 351 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 410
SR + +G W +SP + + LF + +N ++ A SG+ PS+ ++ E VE
Sbjct: 527 SRVRMEGVWPSSPHLNVTPNLFSDP--NNNSVLARSPISGYLNV-PSRSSDGPTCEHVED 583
Query: 411 GRKTETGTSCRLFGIELINHATS---SAPSE---KVPV-SSLTTEGHIISTISAAADSDG 463
G+K E C LFG+ L N+ ++ + PSE + P+ SS+ G S +AA +++
Sbjct: 584 GKKIENSLDCWLFGVNLTNNCSNVIITTPSERELRGPISSSVAPSGPKESIPAAACETER 643
Query: 464 KSDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
K Q+Q+ + SP E Q+KQ+ + S R+RTKVQMQGVAVGRA DLTTL GY
Sbjct: 644 VQTPNYSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKVQMQGVAVGRAFDLTTLSGY 703
Query: 522 DHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
D LI+ELE++F+I+G+LH++ KW + +TDDE DMMLVGDDPW EFCNMVKRIFICS +D+
Sbjct: 704 DDLIEELEKLFEIRGELHSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFICSREDL 763
Query: 582 KKMSPGSKLPMFSIEGEDILLSSDSAEK 609
KKM KLP S E E++LLS DS +
Sbjct: 764 KKMK-CCKLPASSSEVEEVLLSPDSQNR 790
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/591 (60%), Positives = 433/591 (73%), Gaps = 61/591 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE++TDEVYAQI L+PE + +EP +PDP P +S RPKVHSFSKVLTASDTSTHGGFSVLR
Sbjct: 75 AEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPESQRPKVHSFSKVLTASDTSTHGGFSVLR 134
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVT+KRLV
Sbjct: 135 KHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTAKRLV 194
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGDTFVFLRGENGEL VGVR RQQ++MPSSVISS SMHLGVLATA HA T++MF VY
Sbjct: 195 AGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATACHATQTRSMFTVY 254
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPRTSQFIISLNKYLEA++NKF+VG+R+KMRFEGEDSPERRFSGTVVGV+D S HWKDS
Sbjct: 255 YKPRTSQFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERRFSGTVVGVKDCSTHWKDS 314
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
WR L+V WDEPASI+RPD+VSPWEIEPFV S N+ V+ KNKRPR EV L
Sbjct: 315 NWRCLEVHWDEPASISRPDKVSPWEIEPFVTSE--NVPHSVMPKNKRPRHYSEVSALG-- 370
Query: 302 SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT 361
AS WS+ L QSH Q +T++
Sbjct: 371 KTASNLWSSALTQSHEFAQSCITSQR---------------------------------N 397
Query: 362 SPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LEQVETGRKTETGTS 419
SP QQ +++A +D KN S W A +P+ + NN + +EQ +K ET S
Sbjct: 398 SP-----QQCYRDATEDAKN-SDWSA-----SPYSATLNNQMVFPVEQ----KKPETTAS 442
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
RLFGI+L++ + + + P + I+ + ++SD KS+++K +EKKQE
Sbjct: 443 YRLFGIDLLSSSIPATEEKTAPTLPIN-----ITKPTPDSNSDPKSEVSKLSEEKKQEPA 497
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 539
Q S KE QSK+ ++S RSRTKVQMQGV VGRA+DLT L GY LID+LE++FDI+G+L
Sbjct: 498 QASSKEVQSKE--ISSTRSRTKVQMQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELK 555
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L
Sbjct: 556 SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQL 606
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/627 (58%), Positives = 447/627 (71%), Gaps = 23/627 (3%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ+TDEVYA I LLPE Q EPT PDP +++P+ K HSF K+LTASDTSTHGGFSVL
Sbjct: 92 LAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKILTASDTSTHGGFSVL 151
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLP LDM QSTPTQEL AKDLHG+EW+FKHI+RGQPRRHLLTTGWSTFV SKRL
Sbjct: 152 RKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRL 211
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRGE+G+L VGVR LARQQS MPSSVISSQSMHLGVLATASHAV T+TMF+V
Sbjct: 212 VAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLV 271
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFI+ LNKYLEAVNNKF++ MR+KMRFEG+DSPERRFSGT+VGV D S W +
Sbjct: 272 YYKPRTSQFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSN 331
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP-VLAKNKRPRLSMEVPPLD 299
S+WRSLKVQWDEPA+I RPDRVS WEIEPFVAS N+ QP V K RP + +
Sbjct: 332 SQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSRPADVLSSGSI- 390
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVA-WHHKHSDF-------SSNSNFMS 351
SAAS W S+ L+QL AE + +N V + D ++NS+ +
Sbjct: 391 FNSAASGFWYH--GSSNELSQLGAAAEVQSKENQVVPCSLRQKDIINSNPINANNSSIST 448
Query: 352 RTQSDGEWLTSPRVKFSQQLFQE--AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 409
R + +G W +SP + + LF + + N +SA SG+ PS+ ++ + VE
Sbjct: 449 RVRMEGVWPSSPHLNATPNLFSDPNNNNSNNGVSARSLISGYPN-VPSRSSDGPTCDGVE 507
Query: 410 TGRKTETGTSCRLFGIELINHATS--SAPSE---KVPVSSLTTEGHIISTISAAADSDGK 464
G+KTE C LFG+ L N+ ++ + PSE + P SS+ G S +AA +++
Sbjct: 508 DGKKTENSLDCWLFGVNLTNNCSNVITTPSEREQRGPSSSVVLSGPKESIPAAACETERV 567
Query: 465 SDIAKEFKEKKQEQV--QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
K Q+Q+ + SP + Q+KQ+ + S R+RTKVQMQGVAVGRA DLTTL GYD
Sbjct: 568 QTPNYSLSNKGQKQIISEASPNQWQNKQATVLSMRTRTKVQMQGVAVGRAFDLTTLSGYD 627
Query: 523 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
LIDELE++F+I+G+L ++ KW + +TDDE DMML GDDPW EFCNMVKRIFICS +D+K
Sbjct: 628 DLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGDDPWPEFCNMVKRIFICSREDLK 687
Query: 583 KMSPGSKLPMFSIEGEDILLSSDSAEK 609
KM KLP S E E+ILLS DS +
Sbjct: 688 KMK-CCKLPASSSEVEEILLSPDSQNR 713
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/595 (62%), Positives = 446/595 (74%), Gaps = 54/595 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE++TDEVYAQITL+P ++ + PT+PDP P + RPKVHSFSKVLTASDTSTHGGFSVL
Sbjct: 73 AEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVL 132
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 133 RKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 192
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRGE GEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T+TMF+V
Sbjct: 193 VAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIV 252
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+GV D SPHWKD
Sbjct: 253 YYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVNDCSPHWKD 312
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+
Sbjct: 313 SKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSE--NVPKSVMLKNKRPRQVSEVSALDV 370
Query: 301 PS-AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
AS WS+ L QSH Q +T++ W
Sbjct: 371 GGITASNLWSSVLTQSHEFAQSCITSQ--------------------------------W 398
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETG 417
+SP QQ ++A +D K S W ++ +S + SK + ND ++ VE +K ET
Sbjct: 399 -SSP-----QQCHRDANEDAKK-SDW-INNSYSVSNVSKDSTLNDQMVSPVEQ-KKPETT 449
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
T+ RLFGI+L++ + +++ + P+ + IS + + SD KS+I+K +EKKQE
Sbjct: 450 TNYRLFGIDLMSSSLAASEEKTAPMRPIN-----ISKPTMDSHSDPKSEISKVSEEKKQE 504
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
+ SPKE QSKQS +S RSRTKVQMQGV VGRA+DLT L GY+ LID++E++FDIKG+
Sbjct: 505 PAEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGE 562
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 592
L +R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M
Sbjct: 563 LQSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRM 617
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/600 (61%), Positives = 444/600 (74%), Gaps = 53/600 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE++TDEVYAQITL+P ++ +EP +PDP P + RPKVHSFSKVLTASDTSTHGGFSVL
Sbjct: 75 AEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 135 RKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRGENGEL VGVR QQSSMPSSVISS SMHLGVLATA HA T+TMF+V
Sbjct: 195 VAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIV 254
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+GV+D SPHWKD
Sbjct: 255 YYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKD 314
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+
Sbjct: 315 SKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDV 372
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
AS WS+ L Q H Q +T++ W
Sbjct: 373 GITASNLWSSVLTQPHEFAQSCITSQ--------------------------------W- 399
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGT 418
+SP QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET
Sbjct: 400 SSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTA 451
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
+ RLFGI+L++ + + + P+ + IS + + SD KS+I+K +EKKQE
Sbjct: 452 NYRLFGIDLMSSSLAVPEEKTAPMRPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEP 506
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
+ SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L
Sbjct: 507 AEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL 564
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
+R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 565 RSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 624
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/600 (59%), Positives = 435/600 (72%), Gaps = 17/600 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AE+ETDEVYAQITL PE Q+EP + DP P + R VHSF K+LTASDTSTHGGFSVL
Sbjct: 84 LAEKETDEVYAQITLYPEADQSEPQSADPEPPERTRQTVHSFCKILTASDTSTHGGFSVL 143
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM+QSTPTQEL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 144 RKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 203
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRG+NGEL VGVR ARQQS MPSSVISS SMHLGVLATASHAV TQT FVV
Sbjct: 204 VAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVV 263
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLE V N + VGMR+KMRFEGE+SPERRF+GT+VGV D SP W D
Sbjct: 264 YYKPRTSQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSD 323
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLK+QWDEPA+I RP+RVSPWEIEPFV SA+ N P + K+KR R +E+PP ++
Sbjct: 324 SKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEV 381
Query: 301 P--SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DG 357
SA S W SH ++QLS T E + +N V W SNS+ + + +G
Sbjct: 382 TSGSAPSGFWLQGSTISHEISQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEG 441
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTE 415
W SP + S L+ ++ + + + P S +S+ SKP++D + +Q+E G K +
Sbjct: 442 IW-PSPPLNISLNLYPDSTFERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPD 500
Query: 416 TGTSCRLFGIELINHATSSAPSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
CR+FGI+L N+ + E+ + V+ E + + ++ D+ S +KE
Sbjct: 501 ISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE 560
Query: 471 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
+Q ++ K +Q+K S+R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE
Sbjct: 561 ----QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELEN 616
Query: 531 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+F+IKG+L KW IV+TDDE DMMLVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 617 VFEIKGELRGINKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 676
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/600 (61%), Positives = 443/600 (73%), Gaps = 55/600 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE++TDEVYAQITL+P ++ +EP +PDP P + RPKVHSFSKVLTASDTSTHGGFSVL
Sbjct: 75 AEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 135 RKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRGENGEL VGVR QQSSMPSSVISS SMHLGVLATA HA T+TMF+V
Sbjct: 195 VAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIV 254
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEA++NKF+VGMR+KMRFEGEDSPERR+SGTV+GV+D SPHWKD
Sbjct: 255 YYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERRYSGTVIGVKDCSPHWKD 314
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV L +
Sbjct: 315 SKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALGI 372
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
AS WS+ L Q H Q +T++ W
Sbjct: 373 --TASNLWSSVLTQPHEFAQSCITSQ---------W------------------------ 397
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGT 418
+SP QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET
Sbjct: 398 SSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTA 449
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
+ RLFGI+L++ + + + P+ + IS + + SD KS+I+K +EKKQE
Sbjct: 450 NYRLFGIDLMSSSLAVPEEKTAPMRPIN-----ISKPTMDSHSDPKSEISKVSEEKKQEP 504
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
+ SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L
Sbjct: 505 AEGSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL 562
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
+R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 563 RSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 622
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/595 (58%), Positives = 420/595 (70%), Gaps = 71/595 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE++TDEVYAQI L+PE + +EP +PDP P + +PK HSF+KVLTASDTSTHGGFSVLR
Sbjct: 66 AEKDTDEVYAQIMLMPEGTVDEPMSPDPSPPELQKPKFHSFTKVLTASDTSTHGGFSVLR 125
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSK+LV
Sbjct: 126 KHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFVTSKKLV 185
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGDTFVFLRGENGEL VGVR RQQSSMPSSVISS SMHLGVLATA HA T++MF VY
Sbjct: 186 AGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTRSMFTVY 245
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPRTSQFI+SL+KYLEA+N+KF+VGMR+KMRFEG+DSPERRFSGTVVGV+D SPHWKDS
Sbjct: 246 YKPRTSQFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERRFSGTVVGVQDCSPHWKDS 305
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
KWRSL V WDEPAS TRPD+VSPWE+EPF AS N+ Q V NKR R E+ L +P
Sbjct: 306 KWRSLIVNWDEPASFTRPDKVSPWEMEPFAASE--NVPQSV---NKRARHVNEISALGVP 360
Query: 302 SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT 361
S S WS+ L QSH Q +T++ N
Sbjct: 361 S--SNFWSSALTQSHEFAQSCITSQRNPPQN----------------------------- 389
Query: 362 SPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
S WP P N ++ VE + T SCR
Sbjct: 390 ---------------------SDWPV-------SPYSTLNGQMVFPVEQKKPETTTASCR 421
Query: 422 LFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 481
LFGI+L++ + + + P+ + I+ + +++D KS+I+K +EKKQE Q
Sbjct: 422 LFGIDLMSSSLPAHEEKTAPMRPIN-----ITKPTLDSNADPKSEISKLSEEKKQEPAQA 476
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 541
SPKE QSKQ + S+RSRTKVQMQGV VGRA+DLT + GY LID+LE++FDI+G+L +R
Sbjct: 477 SPKEVQSKQ--INSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEGELKSR 534
Query: 542 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 596
+WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L + E
Sbjct: 535 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRILLTE 589
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/610 (57%), Positives = 413/610 (67%), Gaps = 96/610 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITL PE Q EP +PD CP ++P+ VHSF K+LTASDTSTHGGFSVL
Sbjct: 84 LAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAPKQTVHSFCKILTASDTSTHGGFSVL 143
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHA ECLPPLDM+Q+TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 144 RKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 203
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRG+NGEL VGVR LARQQS MPSSVISSQSMHLGVLATASHAV TQT+FVV
Sbjct: 204 VAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVV 263
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEAVN FAVGMR+KMRFEGEDSPERRF+GT+VG+ D SP W +
Sbjct: 264 YYKPRTSQFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERRFTGTIVGIGDISPQWSN 323
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLK+QWDEPA+I RP+RVS W+IE
Sbjct: 324 SKWRSLKIQWDEPATIQRPERVSSWDIE-------------------------------- 351
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKR-IDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
P ASA S NLTQ V + R +D VA +++ S S F W
Sbjct: 352 PFVASA--------SLNLTQPPVKIKRPRPLDLPVA---ENTSSSVPSPF---------W 391
Query: 360 L--TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETG 417
+SP + +Q + +++ WP P P + N + +
Sbjct: 392 YAGSSPSHELTQLGGVTEVQSSESQVHWP-------PKPKEINGNQ-----------NSS 433
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
CRLFGI+L N++ ++A E + D++K E+KQ
Sbjct: 434 IGCRLFGIDLTNNSKATALLEMI----------------------QNLDVSKSSNEQKQV 471
Query: 478 QVQVSPKESQSKQSCLTSNRSRTK-VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
+ S KE+Q +QSC S+R+RTK VQMQGVAVGRA+DLT L GYD LI ELE+MF+IKG
Sbjct: 472 VPEASQKETQGRQSCTPSSRTRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKG 531
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 596
+L R KWE+V+TDDEGDMMLVGDDPW EFC MV++IFI SS++VKKMSP KL S++
Sbjct: 532 ELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLD 591
Query: 597 GEDILLSSDS 606
GE ++S DS
Sbjct: 592 GEGTVISLDS 601
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 354/612 (57%), Positives = 422/612 (68%), Gaps = 29/612 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYA+ITLLPE +Q EPT+PDP P ++ + H+FSK+LTASDTSTHGGFSVL
Sbjct: 73 LAEQETDEVYARITLLPESNQEEPTSPDPSPPETQKQVFHTFSKILTASDTSTHGGFSVL 132
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HATECLP LDM Q+TP+QELVA+DLHG+EW+FKHIFRGQPRRHLLTTGWSTFVTSK+L
Sbjct: 133 RRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKKL 192
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD FVFLRGENGEL VGVR +ARQQS MPSSVISSQSMHLGVLATASHA T TMFVV
Sbjct: 193 VAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATASHAFLTSTMFVV 252
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFII +NKYLEA NNKF+VGMR+KMRFE EDSPERRFSGT+VGV D SP W +
Sbjct: 253 YYKPRTSQFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVSPGWWN 312
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSLKVQWDEPA I RP+RVS WEIEPF AS N+ Q L K+KR R + +
Sbjct: 313 SQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVTQQ-LVKSKRSRTEVSSSEIAP 371
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS-NFMSRTQSDGEW 359
S A A W + T L + E + +N V W + + + N N S+ + +G
Sbjct: 372 NSPALAFW---YRGPQDPTALGSSTEVQSNENPVVWSTRQKEINGNPMNSSSKVRVEGMR 428
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKTETGT 418
+SP K LF D KN A PA S S S+P +D + +E R ++
Sbjct: 429 PSSPHSK--PNLFM----DPKNCKAVPAQSTVS----SRPKDDLAHDPMECAKRSSQNPM 478
Query: 419 SCRLFGIELINHATSSAP---SEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF--KE 473
+C +FG+ L N+ T + E++ ++ G S AA +++ + KE
Sbjct: 479 NCWIFGVNLTNNITKNVTLPDKEQLGCPAIIPSGPKDSIPVAACETEAGQNPYYSLSNKE 538
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
KQ SP SQ R+RTKVQMQG+AVGRA+DLT L YD LIDELE+MFD
Sbjct: 539 HKQNISDGSPSASQRH------TRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFD 592
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
IKG+L +TKW I +TDD DMMLVGDDPW EFC +VKRIFICS +DVKKM SK
Sbjct: 593 IKGELQMQTKWAITFTDDGNDMMLVGDDPWPEFCTVVKRIFICSREDVKKMK--SKHSSS 650
Query: 594 SIEGEDILLSSD 605
S GE+ LLS D
Sbjct: 651 SSVGEETLLSQD 662
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 341/580 (58%), Positives = 415/580 (71%), Gaps = 17/580 (2%)
Query: 21 QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQ 80
Q+EP + DP P + R V F K+LTASDTSTHGGFSVLRKHA ECLPPLDM+QSTPTQ
Sbjct: 1 QSEPQSADPEPPERTRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQ 60
Query: 81 ELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGV 140
EL AKDLHGYEW+FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRG+NGEL VGV
Sbjct: 61 ELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGV 120
Query: 141 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAV 200
R ARQQS MPSSVISS SMHLGVLATASHAV TQT FVVYYKPRTSQFIISLNKYLE V
Sbjct: 121 RRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETV 180
Query: 201 NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 260
N + VGMR+KMRFEGE+SPERRF+GT+VGV D SP W DSKWRSLK+QWDEPA+I RP+
Sbjct: 181 KNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWSDSKWRSLKIQWDEPATIQRPE 240
Query: 261 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP--SAASAPWSARLAQSHNL 318
RVSPWEIEPFV SA+ N P + K+KR R +E+PP ++ SA S W SH +
Sbjct: 241 RVSPWEIEPFVPSASLNFTHPAI-KSKRAR-PVEIPPPEVTSGSAPSGFWLQGSTISHEI 298
Query: 319 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DGEWLTSPRVKFSQQLFQEAID 377
+QLS T E + +N V W SNS+ + + +G W SP + S L+ ++
Sbjct: 299 SQLSGTNEVQSSNNRVVWALGQRKLDSNSSHCNPVANVEGIW-PSPPLNISLNLYPDSTF 357
Query: 378 DNKNI-SAWPAHSGHSTPHPSKPNNDTLL-EQVETGRKTETGTSCRLFGIELINHATSSA 435
+ + + P S +S+ SKP++D + +Q+E G K + CR+FGI+L N+ +
Sbjct: 358 ERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGSKPDISLGCRIFGIDLKNNCSIVP 417
Query: 436 PSEK-----VPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 490
E+ + V+ E + + ++ D+ S +KE +Q ++ K +Q+K
Sbjct: 418 TLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSKE----QQLSTELLTKGTQTKH 473
Query: 491 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTD 550
S+R+RTKVQMQGVAVGRA+DLTTL GY+ LIDELE +F+IKG+L KW IV+TD
Sbjct: 474 ISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTD 533
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
DE DMMLVGDDPW EFC MVKRIFICSS++VKKMS SK+
Sbjct: 534 DENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKI 573
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 618 bits (1594), Expect = e-174, Method: Compositional matrix adjust.
Identities = 334/592 (56%), Positives = 421/592 (71%), Gaps = 34/592 (5%)
Query: 1 MAEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+AE++ DEVY QITL+PE P EPTTPDP +P+ HSF KVLTASDTSTHGGFSV
Sbjct: 74 LAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTASDTSTHGGFSV 133
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LRKHA ECLPPLD+NQ TPTQEL+AKDLH EWRFKHIFRGQPRRHLLTTGWSTFV+SK+
Sbjct: 134 LRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTTGWSTFVSSKK 193
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+FVFLRG NG+L VGV+ L RQQSSMPSSV+SSQSMHLGVLATASHAV TQTMFV
Sbjct: 194 LVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLATASHAVTTQTMFV 253
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
VYYKPRT+QFI+ +NKYLEA+ +++AVGMR+KM+FE E +P+RRF GT+VG++D S WK
Sbjct: 254 VYYKPRTTQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRRFMGTIVGIDDLSSQWK 313
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
+S WRSLKV+WDEPA+I RPDRVSPWEI+P+V S LV P KNKR RL E+ +
Sbjct: 314 NSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEKNKRHRLHSEIKISE 373
Query: 300 LPSA--ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
PS+ ASA W+ L +S + + S+N S T+S
Sbjct: 374 QPSSSNASAVWNPSL-RSPQFNTFGINS------------------STNCALASLTESGW 414
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETG 417
+ P + S L E +D ++ W P + N ++ + GRK +T
Sbjct: 415 QL---PHLNTSGMLVDEP-EDGRSAPTWCGFPCVLAPQFGQGTNQPIVIPTD-GRKCDTK 469
Query: 418 TSCRLFGIELINHATSSAPS----EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
+CRLFGI+L + + S+ + + +S + E +T+ A DSD KS+++ +FK+
Sbjct: 470 KTCRLFGIDLKSSSISTTEARLQLQPAGISCVFAERAPPNTV-PAGDSDQKSELSVDFKD 528
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
+ Q +++ KE QSKQSC S RSRTKVQMQGVAVGRA+DLT L GYD L ELEEMF+
Sbjct: 529 QMQGHLRLPLKEVQSKQSC--STRSRTKVQMQGVAVGRAVDLTILKGYDELTKELEEMFE 586
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
I+G+L +R KW I++TDDEGD ML+GD PW +FCN+V++IFICSSQD+KK++
Sbjct: 587 IQGELQSRQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKKLT 638
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/608 (53%), Positives = 390/608 (64%), Gaps = 101/608 (16%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASDTSTHGGFSVLR
Sbjct: 84 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 144 KHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRG+ G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+
Sbjct: 204 AGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFIIS+NKY+ A+ N F++GMR++MRFEGE+SPER F+GT+VG D S W S
Sbjct: 264 YKPRISQFIISVNKYMVAMKNGFSLGMRFRMRFEGEESPERIFTGTIVGSGDLSSQWPAS 323
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEVPPLDL 300
KWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K+KR R P+++
Sbjct: 324 KWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRSR------PIEI 376
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
+ +A SNF+S E
Sbjct: 377 TGSPAA----------------------------------------SNFLSSFPQSHE-- 394
Query: 361 TSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TG 417
++P VK LF + A + N N S + SG +KTE
Sbjct: 395 SNPSVKL---LFHDIATERNSNKSVF--SSGLQC------------------KKTEAPVT 431
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
+ CRLFG +L TS S +P + +IS S +DS K +
Sbjct: 432 SCCRLFGFDL----TSKPASAPIPCNK-----QLISVDSNISDSTPKC---------QDP 473
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G+
Sbjct: 474 NSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGE 529
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 597
L + KW IV+TDDEGDMMLVGDDPW+EFC M K++FI S +VKK+S S LP EG
Sbjct: 530 LSPKDKWTIVFTDDEGDMMLVGDDPWNEFCKMAKKLFIYPSDEVKKLSSKSLLP---DEG 586
Query: 598 EDILLSSD 605
+ L SD
Sbjct: 587 TIVYLESD 594
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 314/505 (62%), Positives = 369/505 (73%), Gaps = 12/505 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ E+DEVYAQITL+PE +QNEP + DPCP + PRP VHSF KVLTASDTSTHGGFSVL
Sbjct: 88 LADHESDEVYAQITLMPESNQNEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTHGGFSVL 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM +TPTQ+LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 148 RKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+FVFLRG+NGEL VGVR ARQQSSMP SVISSQSMHLGVLATASHAV TQT FVV
Sbjct: 208 SAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTTQTRFVV 267
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRT QFIISLNKYLEAVNNKF+VGMR+ M FEGEDSPERRFSGT++G D SPHW +
Sbjct: 268 YYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAVDISPHWPN 327
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S WRSL+VQWDE SI RPDRVSPW+IEP +SA L QP KNKRPR + P
Sbjct: 328 SSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPXF-KNKRPR---QPTPAHD 383
Query: 301 PSAASAP--WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
+ + P W + LAQSH+ Q S AE ++ +N+ + HH+ +D SNS+ +SRTQ+D
Sbjct: 384 GADLTKPTHWDSGLAQSHDGKQCSNAAEGRKGENNESCHHRETDTISNSSCVSRTQTD-T 442
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNI--SAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 416
WL+ + + + D+K + S W G T H K ++D +L+ +E+G+K ET
Sbjct: 443 WLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLVKLSDDQILDPIESGKKGET 502
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
SCRLFGI+L NH + S + S T+G IST+S A SD KSD + E+K
Sbjct: 503 VASCRLFGIDL-NHLAAEKASSQPSSGSSDTDGR-ISTLS-VAQSDPKSDNLEVSIERKS 559
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTK 501
E Q S KE Q QS + RSRTK
Sbjct: 560 ELSQASLKEIQCNQSSSANTRSRTK 584
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/596 (54%), Positives = 401/596 (67%), Gaps = 57/596 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPEP Q+E T+PDP + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 83 AEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVHSFCKTLTASDTSTHGGFSVLR 142
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 143 RHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 202
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGVLATASHA+AT T+F V+
Sbjct: 203 AGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIATGTLFSVF 262
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRT S+FI++LNKY+EA N+K +VGMR+KMRFEGE+ PERRFSGT+VGV D S W
Sbjct: 263 YKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNISSGW 322
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKV WDEP+SI RP+RVSPW++EP VA+ TP+ QP + +NKRPR S+
Sbjct: 323 ADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVAT-TPSNSQP-MQRNKRPRPSV----- 375
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
LPS + NL+ L + W K S SS ++ +Q +
Sbjct: 376 -LPSPTA-----------NLSALGM------------W--KPSVESSAFSY-GESQRGRD 408
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG---RKTE 415
SP + + + N +++ +S + P+ + D+ V R+
Sbjct: 409 PYPSPNFSTTAKANSLSFCGNSQVTSVSPNSMYR-PNQVESVTDSFAPVVNKDLGERRQG 467
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TG RLFGI+LI++ + S V VS T G+ +S A+SD S+ K
Sbjct: 468 TGIGYRLFGIQLIDNFNAEGTSPVVTVSG--TVGNDRPVVSLEAESDQHSEPEKSCLRSH 525
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE QS+Q RS TKV MQGVAVGRA+DLT Y+ L+ +LEEMFDI+
Sbjct: 526 QEL--------QSRQI-----RSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIE 572
Query: 536 GQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
G+L T KW++VYTD+E DMM VGDDPWHEFC+MVK+IFI +S++VK++SP KL
Sbjct: 573 GELSGSTKKWQVVYTDNEDDMMKVGDDPWHEFCSMVKKIFIYASEEVKRLSPKIKL 628
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/601 (52%), Positives = 385/601 (64%), Gaps = 101/601 (16%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTSTHGGFSVLR
Sbjct: 88 AEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLV
Sbjct: 148 KHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+
Sbjct: 208 AGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVF 267
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER F+GT+VG D S W S
Sbjct: 268 YKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIFTGTIVGSGDLSSQWPAS 327
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVAS---ATPNLVQPVLAKNKRPRLSMEVPPL 298
KWRSL+VQWDEP ++ RPD+VSPWEIEPF+A+ +TP Q +K KR R +E P +
Sbjct: 328 KWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTP--AQQPQSKCKRSR-PIE-PSV 383
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
P+ S +S L QS + S+ A K + + +SSN++F T
Sbjct: 384 KTPAPPSFLYS--LPQSQD----SINASLKLFQDP-SLERISGGYSSNNSFKPET----- 431
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
P P N
Sbjct: 432 -------------------------------------PPPPTN----------------C 438
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
S RLFG +L +++ + P +K P + T AA K QE
Sbjct: 439 SYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KCQEP 473
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
+ + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+GQL
Sbjct: 474 ITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQL 530
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+E E
Sbjct: 531 LARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKISS-SLENE 589
Query: 599 D 599
+
Sbjct: 590 E 590
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/593 (53%), Positives = 385/593 (64%), Gaps = 105/593 (17%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + + V SF K+LTASDTSTHGGFSVLR
Sbjct: 75 AEHETDEVYAQITLQPEEDQSEPTSLDPPLTEPAKQTVDSFVKILTASDTSTHGGFSVLR 134
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLPPLDM Q+TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 135 KHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 194
Query: 122 AGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD FVFLRG + G+L VGVR LA+QQS+MP+SVISSQSMHLGVLATASHA T TMFVV
Sbjct: 195 AGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAFNTTTMFVV 254
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YKPR SQFIIS+NKY+ A+ F +GMR++MRFEGE+SPER F+GT+VG D SP W
Sbjct: 255 LYKPRISQFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERIFTGTIVGTGDLSPQWPA 314
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEVPPLD 299
SKWRSL+VQWDE +++ RP++VSPWEIEPF+ S T + QP +K+KR R P+D
Sbjct: 315 SKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQP-YSKSKRSR------PID 367
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
PS + S VA SNF+SR E
Sbjct: 368 -PSVSEITGSP-----------------------VA-----------SNFLSRFPKSHE- 391
Query: 360 LTSPRVKFSQQLFQE-AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
SP +K LFQ+ + + N N + PA S
Sbjct: 392 -PSPSLKL---LFQDPSSERNSNKTEAPATS----------------------------- 418
Query: 419 SCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
CRLFG +L + A++ P++K + IS +++ G + K Q+
Sbjct: 419 CCRLFGFDLKSKPASAPNPNDKQQL------------ISVDSNNTGSA--------KCQD 458
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
P S+ ++ +S RSRTKVQMQG AVGRA+DLT L YD LI ELE+MF+I+G+
Sbjct: 459 -----PNSSKDQKQQTSSTRSRTKVQMQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGE 513
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
L T+ KW IV+TDDEGDMMLVGDDPW EFC M K++FI SS +VKKMS S L
Sbjct: 514 LRTKDKWAIVFTDDEGDMMLVGDDPWDEFCKMAKKLFIYSSDEVKKMSSKSLL 566
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 317/612 (51%), Positives = 386/612 (63%), Gaps = 112/612 (18%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTSTHGGFSVLR
Sbjct: 88 AEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLV
Sbjct: 148 KHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+
Sbjct: 208 AGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVF 267
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER-----------RFSGTVVG 230
YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER RF+GT+VG
Sbjct: 268 YKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWNVFRFTGTIVG 327
Query: 231 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS---ATPNLVQPVLAKNK 287
D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A+ +TP Q +K K
Sbjct: 328 SGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTP--AQQPQSKCK 385
Query: 288 RPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNS 347
R R +E P + P+ S +S L QS + S+ A K + + +SSN+
Sbjct: 386 RSR-PIE-PSVKTPAPPSFLYS--LPQSQD----SINASLKLFQDP-SLERISGGYSSNN 436
Query: 348 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ 407
+F T P P N
Sbjct: 437 SFKPET------------------------------------------PPPPTN------ 448
Query: 408 VETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI 467
S RLFG +L +++ + P +K P + T AA
Sbjct: 449 ----------CSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA--------- 479
Query: 468 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
K QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDE
Sbjct: 480 ------KCQEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDE 530
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
LEEMF+I+GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+
Sbjct: 531 LEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTK 590
Query: 588 SKLPMFSIEGED 599
K+ S+E E+
Sbjct: 591 LKISS-SLENEE 601
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/597 (52%), Positives = 395/597 (66%), Gaps = 74/597 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL
Sbjct: 144 RHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLA 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAITTGTLFSVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKD 240
YKP S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV D S W D
Sbjct: 264 YKPSPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGWTD 323
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR P L
Sbjct: 324 SEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR----SPVLSS 377
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 378 PTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP--------------- 418
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETGTS 419
+LF TP P+K E G+K E G
Sbjct: 419 ---------ELF--------------------TPVPNK----------EYGKKKPENGNG 439
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
RLFGI+L++++ E +PV+++++ G + ADSD +S + + K
Sbjct: 440 YRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRSN-INQSKTPT 495
Query: 479 VQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
V P++S S L S RS TKV MQG+AVGRA+DLT Y L+ +LEEMFDIKG
Sbjct: 496 VGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKG 555
Query: 537 QLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 592
+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 556 ELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 612
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 317/596 (53%), Positives = 397/596 (66%), Gaps = 58/596 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPEP Q+E T+PDP + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 88 AEPETDEVYAQITLLPEPDQSEVTSPDPPLPEPERCTVHSFCKTLTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 148 RHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGVLATASHA+AT T+F V+
Sbjct: 208 AGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIATGTLFSVF 267
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRT S+FI+SLNKYLE N+K +VGMR+KMRFEGE+ PERRFSGT+VGV D S W
Sbjct: 268 YKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNISSGW 327
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS WRSLKVQWDEP+SI RP+RVS WE+EP VA+ TP+ QPV +NKR R P
Sbjct: 328 ADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVAT-TPSNSQPV-QRNKRAR------PY 379
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
+PS + +L+ L + W S S++ +Q +
Sbjct: 380 VIPSPTA-----------DLSALGM------------W---KSPVESSALSYGDSQRGRD 413
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV--ETG-RKTE 415
+SP + ++ N +++ +H+ P+ + D+ V ++G R+
Sbjct: 414 LYSSPNFSTTAKVNSLGFRGNSQVAS-VSHNSMHWPNRVESVTDSFAPVVNKDSGERRQG 472
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TG +LFGI+L+ ++ + S PV T + + +S A+SD S+ K
Sbjct: 473 TGIGYKLFGIQLVENSNTEGTS---PVVVSGTVVNDLPVLSLEAESDQHSEPEKSCLRSS 529
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE QS+Q RS TKV MQGVAVGRA+DLT Y+ L+ +LEEMFDI+
Sbjct: 530 QEL--------QSRQI-----RSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIE 576
Query: 536 GQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
G+L T KW++VYTD+E DMM VGDDPW+EFC MVK+IFI +S++VK++SP KL
Sbjct: 577 GELSGSTKKWQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRLSPKIKL 632
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 323/606 (53%), Positives = 402/606 (66%), Gaps = 61/606 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQ+TLLPEP Q+E T+PDP + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 88 AEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQRCTVHSFCKTLTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 148 RHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 208 AGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 267
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED--FSPH 237
YKPRT S+FI+SLNKYLEA N+K +VGMR+KMRFEGE+ PERRFSGT+VGV D S
Sbjct: 268 YKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDKNTSSG 327
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W DS+WRSLKVQWDEPASI RP+RVS WE+EP VA+A P +QP +NKR R PP
Sbjct: 328 WADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTNLQPA-QRNKRAR-----PP 381
Query: 298 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWH--HKHSDFSSNSNFMSRTQS 355
+ LPSA + +L+ L + + + H+ D + F S T++
Sbjct: 382 V-LPSA-----------TPDLSVLGMWKSSVESPSGFPYCDPHRGRDLYPSPKFSSITKT 429
Query: 356 ---DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 412
+SP S ++ + S PA + S E R
Sbjct: 430 NSFSFSGNSSPAAVSSNSMYWSNRMETATESFAPAVNKESG---------------EKRR 474
Query: 413 KTETGTSCRLFGIELINHAT--SSAP----SEKVPVSSLTTEGHIISTISAAADSDGKSD 466
T G+ CRLFG +L++++T + P E PV SL E S + + +SD
Sbjct: 475 DT--GSGCRLFGFQLLDNSTLEETLPVLTVGEDQPVPSLDVE----SDQHSEPSNINRSD 528
Query: 467 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 526
I E + ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT Y+ L+
Sbjct: 529 IPSVSCEPDKLSLR-SPQESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFDRYEDLLK 582
Query: 527 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+LEEMFDI+G+L T W++VYTDDE DMM+VGDDPW EFC+MV++IFI ++++VK++S
Sbjct: 583 KLEEMFDIQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLS 642
Query: 586 PGSKLP 591
P KLP
Sbjct: 643 PKIKLP 648
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/599 (52%), Positives = 396/599 (66%), Gaps = 76/599 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTSTHGGFSVLR
Sbjct: 87 AEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL
Sbjct: 147 RHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLA 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+ T T+F V+
Sbjct: 207 AGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAITTGTLFSVF 266
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV D S W
Sbjct: 267 YKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGW 326
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR P L
Sbjct: 327 TDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR----SPVL 380
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 381 SSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP------------- 423
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETG 417
+LF TP P+K E G+K E G
Sbjct: 424 -----------ELF--------------------TPVPNK----------EYGKKKPENG 442
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIAKEFKEKKQ 476
RLFGI+L++++ E +PV+++++ G + ADSD +S + + K
Sbjct: 443 NGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRSN-INQSKT 498
Query: 477 EQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
V P++S S L S RS TKV MQG+AVGRA+DLT Y L+ +LEEMFDI
Sbjct: 499 PTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDI 558
Query: 535 KGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 592
KG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 559 KGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 617
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/599 (52%), Positives = 396/599 (66%), Gaps = 76/599 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTSTHGGFSVLR
Sbjct: 85 AEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLR 144
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRL
Sbjct: 145 RHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLA 204
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ +++P SVISS SMHLGVLATASHA+ T T+F V+
Sbjct: 205 AGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHAITTGTLFSVF 264
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPR S+FI+S+NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT+VGV D S W
Sbjct: 265 YKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGW 324
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RP+RVSPWE+EP V + TP QP + ++KRPR P L
Sbjct: 325 TDSEWRSLKVQWDEPSSILRPERVSPWELEPLV-TETPLTAQP-MQRSKRPR----SPVL 378
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
P+ + ++ + SH+ T V + N+ A+ + S+
Sbjct: 379 SSPTPGLSAFAVK-TNSHSFT---VNYSSTAVSNNSAYWPQQSEPVP------------- 421
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT-ETG 417
+LF TP P+K E G+K E G
Sbjct: 422 -----------ELF--------------------TPVPNK----------EYGKKKPENG 440
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTT-EGHIISTISAAADSDGKSDIAKEFKEKKQ 476
RLFGI+L++++ E +PV+++++ G + ADSD +S + + K
Sbjct: 441 NGYRLFGIQLVDNSNV---EETLPVTTISSGAGEDQPVVCLDADSDHQSQRSN-INQSKT 496
Query: 477 EQVQVSPKESQSKQSCLTSN--RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
V P++S S L S RS TKV MQG+AVGRA+DLT Y L+ +LEEMFDI
Sbjct: 497 PTVGSDPEKSCLGSSLLQSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDI 556
Query: 535 KGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPM 592
KG+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI + ++VK++SP +KLP+
Sbjct: 557 KGELCGPTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELSPKAKLPL 615
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 328/605 (54%), Positives = 403/605 (66%), Gaps = 55/605 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPEP Q E T+PDP + PR VHSF K LTASDTSTHGGFSVLR
Sbjct: 87 AEPETDEVYAQITLLPEPEQGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTHGGFSVLR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 147 RHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 207 AGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 266
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRTSQ FIISLNKYLEA N+K +VGMR+KMRFEGED+PERRFSGT++GV D S W
Sbjct: 267 YKPRTSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERRFSGTIIGVGDAVSSRW 326
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RP RVSPWE+EP VA A P+ QP ++KR R PP
Sbjct: 327 ADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVA-AVPSAPQPT-PRSKRAR-----PPA 379
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
LPS P +R +SH ID A+ H S + S S
Sbjct: 380 LLPSTPDIPACSRW-KSH-------------IDAGSAFSHS-SGLQRGLDLYSSANSPTV 424
Query: 359 WLTSPRVK---FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETG-RKT 414
+ ++ FS + + + N+S W + TP S N + E+G R+
Sbjct: 425 FANMTKIGSLPFSGT--NASCEISGNLSYWSNRA--ETPAKSFMANS----KRESGDRRP 476
Query: 415 ETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK---SDIAKE- 470
E+G RLFGI+L++++T + S VS G + S DSD + SDI +
Sbjct: 477 ESGNGYRLFGIQLVDNSTMAESSPAAAVS-----GGVGEDRSVPEDSDQQSQPSDIDRSD 531
Query: 471 ---FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
K + +SP+E QS+Q+ RS TKV +QG+AVGRA+DL+ L Y+ L+++
Sbjct: 532 LPAVSGKPDKYCLMSPQEMQSRQT-----RSCTKVHLQGMAVGRAVDLSRLDCYEDLLNK 586
Query: 528 LEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
LE+MF+I+G+L T KW++VYTDDE D MLVGDDPWHEFC +V++I I + ++VK + P
Sbjct: 587 LEQMFNIEGELSGPTKKWQLVYTDDEDDTMLVGDDPWHEFCGIVRKINIYTPEEVKNLVP 646
Query: 587 GSKLP 591
S LP
Sbjct: 647 RSGLP 651
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 313/605 (51%), Positives = 408/605 (67%), Gaps = 57/605 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLP+P Q+E T+PD + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 80 AEPETDEVYAQITLLPDPDQSEVTSPDTPLPEPERCTVHSFCKTLTASDTSTHGGFSVLR 139
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 140 RHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 199
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQQ++MPSSVISSQSMHLGVLATASHA+AT T+F V+
Sbjct: 200 AGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATASHAIATGTLFSVF 259
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VGV D S W
Sbjct: 260 YKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNVSSGW 319
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ TP+ QPV +NKR R S+
Sbjct: 320 ADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVAT-TPSNSQPV-QRNKRARPSVLPSTP 377
Query: 299 DLPSAAS-APWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
D+ S P + A S+ Q + D + NF + +++
Sbjct: 378 DISSLGMWKPQTESTAFSYGDFQ------------------RGRDLYPSHNFSTSAKTN- 418
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQV--ETGRKTE 415
+ FS N +S +S + P+ + D+ + + ++G + +
Sbjct: 419 ------YLGFS---------GNSPLSGVSPNSLYR-PNRVESVTDSFVPVIDKDSGERRQ 462
Query: 416 -TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD------GKSDIA 468
+G RLFGI+L+ ++ + S + S + + + + A +D +S+I
Sbjct: 463 GSGNGYRLFGIQLVGNSNAEETSPLITTSGMVGDDRPVVSFDAESDQHSEPSNINRSEIP 522
Query: 469 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
E ++ ++ SP+E QS+Q RS TKV MQG+AVGRA+DLT Y+ L+ +L
Sbjct: 523 SISCEPEKSCLR-SPQELQSRQI-----RSCTKVHMQGIAVGRAVDLTRFECYEDLLRKL 576
Query: 529 EEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
EEMFDI+G+L + KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI +S++VK++SP
Sbjct: 577 EEMFDIEGELSGFSKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLSPK 636
Query: 588 SKLPM 592
SKLP+
Sbjct: 637 SKLPV 641
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 316/618 (51%), Positives = 408/618 (66%), Gaps = 82/618 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+E T+PD +SPR K+HSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRVKIHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQP+RHLLTTGWS FV+SK+L
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWSVFVSSKKLA 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR + RQQS++PSSVISS SMHLGVLATASHA+AT T+F V+
Sbjct: 204 AGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASHAIATGTLFSVF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED--FSPH 237
YKPRT S+FI+S+NKYLE ++K +VGMR+KMRFEG++ PERRFSGT+VGV D S
Sbjct: 264 YKPRTSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSSSV 323
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W DS+WRSLKVQWDEP+SI RPDRVS WE+EP V++ N QP +NKR R P
Sbjct: 324 WPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLAN-SQPT-QRNKRAR------P 375
Query: 298 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
L LPS T D + W K S S++ ++ Q G
Sbjct: 376 LILPS---------------------TMPDSSLQG--IW--KSSVESTSFSYCDPQQGRG 410
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL---------LEQV 408
+ P KF N + + + SG+S+ P+N ++ LE +
Sbjct: 411 LY---PSPKF-----------NSSATNFIGFSGNSS--VGSPSNKSIYWSNRMENNLESI 454
Query: 409 ------ETGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD- 460
E G K + TG CRLFGI+L+ ++ + + V +S + + ++ A +D
Sbjct: 455 SAIALKEAGEKRQGTGNGCRLFGIQLLENSNAEGNLQTVTLSGRVGDDRSVPSLDAESDQ 514
Query: 461 -----SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 515
+ +SDI + ++ +Q SP+ESQSKQ RS TKV MQG+AVGRA+DL
Sbjct: 515 HSEPSNANRSDIPSVSCDAEKSCLQ-SPQESQSKQI-----RSCTKVHMQGMAVGRAVDL 568
Query: 516 TTLVGYDHLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 574
T GY+ L+ +LE+MF+IK +L + KW++VYTD+E DMM+VGDDPW EFC++V++IF
Sbjct: 569 TRFDGYEDLLRKLEDMFNIKTELCGSLKKWQVVYTDNEDDMMMVGDDPWDEFCSVVRKIF 628
Query: 575 ICSSQDVKKMSPGSKLPM 592
I ++++VKK+SP +LPM
Sbjct: 629 IYTAEEVKKLSPKIRLPM 646
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 325/625 (52%), Positives = 407/625 (65%), Gaps = 72/625 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 149 AESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTSTHGGFSVLR 208
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 209 RHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 268
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 269 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 328
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRTS+ F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+VG+ D SP W
Sbjct: 329 YKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGW 388
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+S+WRSLKVQWDEP+SI RPD+VS WE+EP VAS P QP +NKRPR P
Sbjct: 389 ANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRPR------PT 440
Query: 299 DLPSAASAPWSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS------NFM 350
LPS S+P + L + S AE +R + + K S +SNS + +
Sbjct: 441 VLPS--SSPDATVLGGWKPTVESSTFSYAEPQRGRDLYS-SPKFSTAASNSLGFNANSSL 497
Query: 351 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 410
S+ W + RV +NI +H + P VE
Sbjct: 498 GAVSSNNYWCNTNRV--------------ENIMDPSSHGANREP-------------VEK 530
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDG----- 463
+ + G CRLFGI+L+ ++ E PVS+ + E ++ I +
Sbjct: 531 KQNSRNG--CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNI 585
Query: 464 -KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
+SDI + +SP ESQS+Q RS TKV MQG+AVGRA+DLT YD
Sbjct: 586 HRSDIPS-ISCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYD 639
Query: 523 HLIDELEEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L+ +LEEMFDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++V
Sbjct: 640 DLLRKLEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEV 699
Query: 582 KKMSPGSKLPMFSIEGEDILLSSDS 606
K++SP KLP+ GE L DS
Sbjct: 700 KRLSPKIKLPL---GGEAKLSKPDS 721
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 320/606 (52%), Positives = 402/606 (66%), Gaps = 64/606 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K LTASDTSTHGGFSVLR
Sbjct: 85 AEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLR 144
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 145 RHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 204
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 205 AGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 264
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPRT S+FI+S+NKYLEA N+K +VGMR+KMRFEG++ PERRFSGT+VGVED S W
Sbjct: 265 YKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVW 324
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++ N QP +NKR R PP+
Sbjct: 325 ADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN-SQPT-QRNKRSR-----PPI 377
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
LPS +T S+ W + + F R G
Sbjct: 378 -LPST--------------MTDSSLQG---------IWKSP----ADSPPFPYRDPQHGR 409
Query: 359 WLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 413
L SPR + F + NK++ W + +ST +P + LE E+G K
Sbjct: 410 DLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLENST----EPFSPVALE--ESGEK 462
Query: 414 TE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD------GKSD 466
+ TG CRLFGI+L+ ++ + + P+S + + ++ +D +SD
Sbjct: 463 RQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDRSVPSLDVESDQHSEPSNVNRSD 522
Query: 467 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 526
I + + ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT GY+ L+
Sbjct: 523 IPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLR 576
Query: 527 ELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW EFC++V+++FI + ++VKK+S
Sbjct: 577 KLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 636
Query: 586 PGSKLP 591
P LP
Sbjct: 637 PKIGLP 642
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 312/599 (52%), Positives = 394/599 (65%), Gaps = 48/599 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 88 AETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 148 RHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 208 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 267
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-W 238
YKPRTSQ F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++GV S W
Sbjct: 268 YKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPW 327
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKRPRLSMEVPP 297
+S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K RP S + P
Sbjct: 328 ANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARPPASNSIAP 387
Query: 298 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
P SA Q + + L T E + S+ N +
Sbjct: 388 ELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPNPI------- 425
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-T 416
+ TS V FS + A+ NK+ WP + + + + +V + +K E +
Sbjct: 426 -FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRANSYSAS------ISKVPSEKKQEPS 476
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKK 475
CRLFGIE+ SSA P+++++ G S A+SD S + K +
Sbjct: 477 SAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQPAASVDAESDQLSQPSHANKSDAP 531
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
+ SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L +LEEMFDI+
Sbjct: 532 AASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQ 586
Query: 536 GQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++P SKLP+
Sbjct: 587 GELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLPII 645
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 312/599 (52%), Positives = 394/599 (65%), Gaps = 48/599 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNE T+P P P + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 88 AETDSDEVYAQIMLQPEADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM Q+ P QELVA+DLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 148 RHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 208 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 267
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-W 238
YKPRTSQ F++S NKYLEA N+K +VGMR+KMRFEG+++PERRFSGT++GV S W
Sbjct: 268 YKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERRFSGTIIGVGSMSTSPW 327
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPF-VASATPNLVQPVLAKNKRPRLSMEVPP 297
+S WRSLKVQWDEP+ + RPDRVSPWE+EP V+++ P+ P K RP S + P
Sbjct: 328 ANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARPPASSSIAP 387
Query: 298 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
P SA Q + + L T E + S+ N +
Sbjct: 388 ELPPVFGLWKSSAESTQGFSFSGLQRTQE---------------LYPSSPNPI------- 425
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-T 416
+ TS V FS + A+ NK+ WP + + + + +V + +K E +
Sbjct: 426 -FSTSLNVGFSTKNEPSAL-SNKHF-YWPMRETRADSYSAS------ISKVPSEKKQEPS 476
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-EKK 475
CRLFGIE+ SSA P+++++ G S A+SD S + K +
Sbjct: 477 SAGCRLFGIEI-----SSAVEATSPLAAVSGVGQDQLAASVDAESDQLSQPSHANKSDAP 531
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
+ SP E+QS+Q RS TKV MQG+AVGRA+DLT L GYD L +LEEMFDI+
Sbjct: 532 AASSEPSPHETQSRQV-----RSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQ 586
Query: 536 GQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
G+L + KW++VYTDDE DMMLVGDDPW EFC+MVKRI+I + ++ K+++P SKLP+
Sbjct: 587 GELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLTPKSKLPII 645
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/609 (51%), Positives = 398/609 (65%), Gaps = 68/609 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNEPT+PD P + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 82 AETDSDEVYAQIMLQPEAEQNEPTSPDAEPPEPERCNVHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-- 237
YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSGT++G+ +
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGTIIGLGSMPANST 321
Query: 238 --WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR------P 289
W +S+WRSLKVQWDEP++I RPDRVSPWE+EP A+ P QP L +NKR P
Sbjct: 322 SPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDAT-NPQPPQPPL-RNKRARPPASP 379
Query: 290 RLSMEVPPLDLPSAASAPWS--ARLAQSHNLTQLSVTAEDKRIDNHVAWH-HKHSDFSSN 346
++ E+PP+ W A AQ+ + + L T E +H + +S FSS+
Sbjct: 380 SIAPELPPV------FGFWKSPAEPAQAFSFSGLQRTQE--------LYHSNPNSIFSSS 425
Query: 347 SNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLE 406
N V F+ + E N N W + + + N
Sbjct: 426 LN----------------VGFNSK--NERSTPNNNHLYWTMRETRTESYSASIN------ 461
Query: 407 QVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 465
+ T +K E+ TS CRLFGIE+ SA S V V+S+ + ++ +D +
Sbjct: 462 KAPTEKKQESATSGCRLFGIEI-----GSAVSPVVTVASVGQDPPPALSVDVESDQLSQP 516
Query: 466 DIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
A + + + SP E++S+Q RS TKV MQG+AVGRA+DLT L GYD L
Sbjct: 517 SHANK-TDAPAASSERSPNETESRQV-----RSCTKVIMQGMAVGRAVDLTRLDGYDDLH 570
Query: 526 DELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+LEEMFDI G+L KW++VYTDDE DMMLVGDDPW+EFC MVKRI+I S ++ K +
Sbjct: 571 RKLEEMFDIHGELSANLRKWKVVYTDDEDDMMLVGDDPWNEFCRMVKRIYIYSYEEAKSL 630
Query: 585 SPGSKLPMF 593
+P +KLP+
Sbjct: 631 TPKAKLPVI 639
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 319/604 (52%), Positives = 402/604 (66%), Gaps = 57/604 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTASDTSTHGGFSVLR
Sbjct: 78 AEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTASDTSTHGGFSVLR 137
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 138 RHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 197
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ S+MPSSVISS SMHLGVLATASHA+AT T+F V+
Sbjct: 198 AGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATASHAIATGTLFSVF 257
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFSGT+VGVED S W
Sbjct: 258 YKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNKSLVW 317
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP +NKR R + +P
Sbjct: 318 ADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-SNPPTNSQPS-QRNKRSRPPI-LPST 374
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
L S+ W + + + + D H D ++NF S
Sbjct: 375 MLDSSLQGVWKSPVESA------PFSYRD---------HQHGRDVYPSTNFNS------- 412
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
+ + F NK+I W + +ST S + E E + T G
Sbjct: 413 -TATGFLGFGGN----CSASNKSI-YWSSRIENSTESFSPV---AVKEFGEKRQGTANG- 462
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLT---TEGHIISTISAAADSD------GKSDIAK 469
CRLFGI+L H S++ E +P+ SL+ + ++ ++ A +D +SD
Sbjct: 463 -CRLFGIQL--HDNSNSNEESLPMVSLSGRVGDDGLLPSLDAESDQHSEPSNVNRSDFPS 519
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
+ ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT GY+ L+ +LE
Sbjct: 520 VSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLE 573
Query: 530 EMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
EMFDI G+L TK W++VYTD+E DMM+VGDDPW EFC++V++IFI ++++VKK+SP
Sbjct: 574 EMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKLSPKI 633
Query: 589 KLPM 592
LP+
Sbjct: 634 GLPI 637
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 320/610 (52%), Positives = 401/610 (65%), Gaps = 68/610 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+E T+PD + PR VHSF K LTASDTSTHGGFSVLR
Sbjct: 80 AEPETDEVYAQITLLPETDQSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLR 139
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 140 RHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 199
Query: 122 AGDTFVFLR----GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
AGD F+FLR GENGEL VGVR L RQQS+MPSSVISS SMHLGVLATASHA++T T+
Sbjct: 200 AGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAISTGTL 259
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF- 234
F V+YKPRT S+FI+S+NKYLEA N+K +VGMR+KMRFEG++ PERRFSGT+VGVED
Sbjct: 260 FSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERRFSGTIVGVEDNK 319
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 294
S W DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V++ N QP +NKR R
Sbjct: 320 SSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPAN-SQPT-QRNKRSR---- 373
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
PP+ LPS T D + W + + F R
Sbjct: 374 -PPI-LPS---------------------TMTDSSLQG--IWKSP----ADSPPFPYRDP 404
Query: 355 SDGEWLT-SPRVKFSQQLF----QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVE 409
G L SPR + F + NK++ W + +ST +P + LE E
Sbjct: 405 QHGRDLYPSPRFSSTATSFLGFGGNSPASNKSM-YWSSRLENST----EPFSPVALE--E 457
Query: 410 TGRKTE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD------ 462
+G K + TG CRLFGI+L+ ++ + + P+S + + ++ +D
Sbjct: 458 SGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGRVGDDRSVPSLDVESDQHSEPSNV 517
Query: 463 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
+SDI + + ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT GY+
Sbjct: 518 NRSDIPSVSCDADKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLTRFDGYE 571
Query: 523 HLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L+ +LEEMFDI+G+L T KW +VYTD+E DMM+VGDDPW EFC++V+++FI + ++V
Sbjct: 572 DLLRKLEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEV 631
Query: 582 KKMSPGSKLP 591
KK+SP LP
Sbjct: 632 KKLSPKIGLP 641
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 323/610 (52%), Positives = 401/610 (65%), Gaps = 69/610 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+E T+PD +SPR VHSF K LTASDTSTHGGFSVLR
Sbjct: 78 AEPETDEVYAQITLLPEADQSEVTSPDDPLPESPRCTVHSFCKTLTASDTSTHGGFSVLR 137
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 138 RHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 197
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQQS+MPSSVISS SMHLGVLATASHA+AT T+F V+
Sbjct: 198 AGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASHAIATGTLFSVF 257
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPRTS +FI+S+NKYLEA ++K +VGMR+KMRFEG++ PERRFSGT+VGV D S W
Sbjct: 258 YKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVW 317
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+SI RPDRVSPWE+EP V S P QP +NKR R PP+
Sbjct: 318 ADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV-STPPTNPQPS-QRNKRSR-----PPI 370
Query: 299 DLP-----SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 353
LP S+ W + + +A D H D ++NF S
Sbjct: 371 -LPSTMPDSSLQGVWKSPVE----------SAPFSYCD-----HQHGRDVYPSTNFNSTA 414
Query: 354 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 413
+ F + NK+I W + +ST S + E G K
Sbjct: 415 TG--------FLGFGGNCYA----SNKSI-YWSSRMENSTESFSP------VALKEFGEK 455
Query: 414 TE-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAADSD--------G 463
+ T CRLF I+L H S++ E +P+ +L+ G S A+SD
Sbjct: 456 RQGTANGCRLFRIQL--HDNSNSNEESLPMVTLSGRMGDDGPLPSLDAESDQHSEPSNVN 513
Query: 464 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 523
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT GY+
Sbjct: 514 RSDIPSVSCDAEKSCLR-SPQESQSRQI-----RSCTKVHMQGMAVGRAVDLTRFDGYED 567
Query: 524 LIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
L+ +LEEMFDI G+L T KW++VYTD+E DMM+VGDDPW EFC++V++IFI ++++V+
Sbjct: 568 LLRKLEEMFDITGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVR 627
Query: 583 KMSPGSKLPM 592
K+SP LP+
Sbjct: 628 KLSPKIGLPI 637
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/613 (51%), Positives = 402/613 (65%), Gaps = 56/613 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTSTHGGFSVLR
Sbjct: 82 AEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF----- 234
YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSK 321
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 294
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +NKR R
Sbjct: 322 SP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RNKRAR---- 374
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
PP A P S L + + +++ + + + S FS++S+ ++
Sbjct: 375 -PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSK 433
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
++ P + +Q F ++ D+K S S N T +E RK
Sbjct: 434 NE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTRVE-----RKQ 468
Query: 415 E-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK- 472
E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD S + K
Sbjct: 469 EPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKS 523
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
+ + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMF
Sbjct: 524 DAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMF 578
Query: 533 DIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
DI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K ++P SKLP
Sbjct: 579 DIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLP 638
Query: 592 MFSIEGEDILLSS 604
+ G+ I LSS
Sbjct: 639 VI---GDTIKLSS 648
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/613 (51%), Positives = 402/613 (65%), Gaps = 56/613 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTSTHGGFSVLR
Sbjct: 86 AEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLR 145
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 146 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 205
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 206 AGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 265
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF----- 234
YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 266 YKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSK 325
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 294
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +NKR R
Sbjct: 326 SP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RNKRAR---- 378
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
PP A P S L + + +++ + + + S FS++S+ ++
Sbjct: 379 -PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSK 437
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
++ P + +Q F ++ D+K S S N T +E RK
Sbjct: 438 NE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKTRVE-----RKQ 472
Query: 415 E-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK- 472
E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD S + K
Sbjct: 473 EPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKS 527
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
+ + SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMF
Sbjct: 528 DAPGTSSERSPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMF 582
Query: 533 DIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
DI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K ++P SKLP
Sbjct: 583 DIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLP 642
Query: 592 MFSIEGEDILLSS 604
+ G+ I LSS
Sbjct: 643 VI---GDTIKLSS 652
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/603 (50%), Positives = 388/603 (64%), Gaps = 64/603 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE QNEPT+PD + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPELDQNEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPT 383
Query: 299 DLPSAASAP---WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
PSA P W + ++ S A K + F N +S
Sbjct: 384 TGPSAPVTPDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-----KS 425
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTLLEQVETGRKT 414
G + S + WP+H+ + S NN++ T +K
Sbjct: 426 FGVSIGS--------------------AFWPSHADSAAESFASAFNNES------TEKKQ 459
Query: 415 ETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 468
G CRLFG EL+ + ++++ S V V S + + +SDI
Sbjct: 460 TNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIP 519
Query: 469 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
+ + ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+ L +L
Sbjct: 520 SGSDDPENSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKL 573
Query: 529 EEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
EEMF+IKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP
Sbjct: 574 EEMFEIKGELLKSTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 633
Query: 588 SKL 590
+KL
Sbjct: 634 NKL 636
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/600 (51%), Positives = 393/600 (65%), Gaps = 58/600 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+EP +PD + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPEADQSEPMSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRT S+FI+S+N+YLEA N K AVGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA+ TP+ P +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHLPP-QRNKRPR------PP 376
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
L S +AP VTA+ W + SS F ++
Sbjct: 377 GLLSPTTAP------------STPVTADG-------VWKSPADNPSSVPLFSPPAKTAAF 417
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-GHSTPHPSKPNNDTLLEQVETGRKTETG 417
L + F +I + WP H+ G + S NN++ E+ +T G
Sbjct: 418 GLG------GNKSFGVSIGS----AFWPTHADGAAESFASALNNESPTEKKQT-----NG 462
Query: 418 TSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
CRLFG EL+ + ++++ S V V S + + + ++++
Sbjct: 463 NVCRLFGFELVENMNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSESLNINQANLPSGS 522
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+ ++ ++ SP++SQS+Q RS TKV MQG AVGRA+DLT Y+ L +LEEM
Sbjct: 523 GDHEKSSLR-SPQKSQSRQI-----RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEM 576
Query: 532 FDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 577 FDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 636
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 302/604 (50%), Positives = 387/604 (64%), Gaps = 61/604 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+EP++ DP P + + HSF K LTASDTSTHGGFSVLR
Sbjct: 82 AETDSDEVYAQIMLQPETDQSEPSSADPEPHEPEKCNAHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM Q+ P QELVAKDLH EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRG+NG+L VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF--SPH 237
YKPRT S+F++S+NKYLEA NNK +VGMR+KMRFEG+++PERRFSGT++GV SP
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGDEAPERRFSGTIIGVGSMTTSP- 320
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W DS WRSLKVQWDEP++I RPDRVSPWE+EP VA++ P K RP S + P
Sbjct: 321 WADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQPPQPPARNKRARPPASPSIAP 380
Query: 298 LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDG 357
P AQ+ + + L T E + + + S N F ++ +
Sbjct: 381 EHPPVFGLWKSPGESAQTFSFSGLQRTQE-----LYPSSPNSIFSSSLNIGFKTKNEPS- 434
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE-T 416
T P +F WP + + + +++V RK E T
Sbjct: 435 ---TLPNNQF----------------YWPIRDTRADSYSAS------IDKVPASRKQEPT 469
Query: 417 GTSCRLFGIELINHATSSAPSEKV-------PVSSLTTEGHIISTISAAADSDGKSDIAK 469
CRLFGIE+ + +++P V P +S+ E +S S SD + +
Sbjct: 470 TAGCRLFGIEIGSAVEATSPVVDVSGACHEQPAASVDIESDQLSQPSHVNKSDAPAASSD 529
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
SP E+QS+Q RS TKV M+G+AVGRA+DLT L GY+ L +LE
Sbjct: 530 R-----------SPYETQSRQV-----RSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLE 573
Query: 530 EMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
EMFDI+G+L + KW++VYTDDE DMMLVGDDPW EFC+MVK+++I S ++ K ++P +
Sbjct: 574 EMFDIQGELSASLKKWKLVYTDDEDDMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLTPKA 633
Query: 589 KLPM 592
KLP+
Sbjct: 634 KLPV 637
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/603 (50%), Positives = 389/603 (64%), Gaps = 69/603 (11%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------PP 377
Query: 299 DLPSAASAP----WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
LPS A+ P W + ++ S A K + F N +
Sbjct: 378 GLPSPATGPSDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-----K 419
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
S G + S + WP ++ + + N+ E+ +T
Sbjct: 420 SFGVSIGS--------------------AFWPTNADSAAESFASAFNNESTEKKQT---- 455
Query: 415 ETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA 468
G CRLFG EL+ + ++++ S V V S + + +SDI
Sbjct: 456 -NGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIP 514
Query: 469 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
+ ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+ L +L
Sbjct: 515 SGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKL 568
Query: 529 EEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
EEMFDIKG+L T KW++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP
Sbjct: 569 EEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPK 628
Query: 588 SKL 590
+KL
Sbjct: 629 NKL 631
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 303/600 (50%), Positives = 386/600 (64%), Gaps = 61/600 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRTS +FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPA 383
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
PS W + ++ S A K + F N +S G
Sbjct: 384 TGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-----KSFGV 425
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTLLEQVETGRKTETG 417
+ S + WP ++ + S NN++ T +K G
Sbjct: 426 SIGS--------------------AFWPTNADSAAESFASAFNNES------TEKKQTNG 459
Query: 418 TSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
CRLFG EL+ + ++++ S V V S + + +SDI
Sbjct: 460 NVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGS 519
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+ ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+ L +LEEM
Sbjct: 520 GDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEM 573
Query: 532 FDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 574 FDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 633
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 310/601 (51%), Positives = 395/601 (65%), Gaps = 53/601 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPEP NE T+PDP P + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 92 AEPETDEVYAQITLLPEPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTSTHGGFSVLR 151
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 152 RHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 211
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE GEL VGVR RQQ++MPSSVISS SMHLGVLATASHA+AT T+F ++
Sbjct: 212 AGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIATGTLFSIF 271
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPRT S+FI+S+NKYLEA +K +VGMR+KMRFEGE+ P+ FSG +VGVED + W
Sbjct: 272 YKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPDEGFSGIIVGVEDNKTSAW 331
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT---PNLVQPVLAKNKRPRLSMEV 295
+S+WRSLKVQWDEP+SI RPDRVS WE+EP VA+ T P QP +NKR R
Sbjct: 332 PNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPA-QRNKRAR----- 385
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
PP+ LP+ A LSV W S S + S +Q
Sbjct: 386 PPV-LPTPAP--------------DLSVLG---------MW---KSPVESQAFSYSDSQH 418
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNN-----DTLLEQVET 410
+ SP KFS + N S+ A +G+S P++ N ++ + +
Sbjct: 419 GRDLYLSP--KFSPATKANPLGFGGN-SSLAAVTGNSMYWPNRGENVMESFAPVVSKESS 475
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
++ TG + +LFGI+L++++ S V +S+ + + ++ A ++ +
Sbjct: 476 EKRQGTGNTYKLFGIQLVDNSNIEESSAAVTMSATVGDDRPVPSLDADSEQHSEPSNIPS 535
Query: 471 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
++ SP+ESQS+Q RS TKV MQG+AVGRA+DLT YD L+ LEE
Sbjct: 536 VSCDAEKSCLRSPQESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEE 590
Query: 531 MFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
MFDI G+L T KW++VYTDDE DMM+VGDDPWHEFC+MV++IFI ++++VK++SP K
Sbjct: 591 MFDIGGELSGATKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAEEVKRLSPKIK 650
Query: 590 L 590
L
Sbjct: 651 L 651
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 302/600 (50%), Positives = 385/600 (64%), Gaps = 61/600 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTST GGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTQGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRTS +FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPA 383
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
PS W + ++ S A K + F N +S G
Sbjct: 384 TGPSGPDGVWKSPADTPSSVPLFSPPA-------------KAATFGHGGN-----KSFGV 425
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHST-PHPSKPNNDTLLEQVETGRKTETG 417
+ S + WP ++ + S NN++ T +K G
Sbjct: 426 SIGS--------------------AFWPTNADSAAESFASAFNNES------TEKKQTNG 459
Query: 418 TSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
CRLFG EL+ + ++++ S V V S + + +SDI
Sbjct: 460 NVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNINQSDIPSGS 519
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+ ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+ L +LEEM
Sbjct: 520 GDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEM 573
Query: 532 FDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VKK+SP +KL
Sbjct: 574 FDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLSPKNKL 633
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 264/323 (81%), Positives = 284/323 (87%), Gaps = 1/323 (0%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQETDEVYAQITLLPE Q E T+PDPCP++ PRP VHSF KVLTASDTSTHGGFSVL
Sbjct: 81 LAEQETDEVYAQITLLPESDQIETTSPDPCPSEPPRPTVHSFCKVLTASDTSTHGGFSVL 140
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHA+ECLPPLDM Q PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 141 RKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 200
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+FVFLRGENGEL VGVR +ARQQSSMPSSVISSQSMHLGVLATASHA++T T+FVV
Sbjct: 201 VAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASHAISTLTLFVV 260
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEAVNNKFAVGMR+KMRFEGEDSPERRFSGT+VGVEDFSPHW D
Sbjct: 261 YYKPRTSQFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERRFSGTIVGVEDFSPHWND 320
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLKVQWDEPASI+RPDRVSPWEIEP VAS NL QPV KNKRPR +E+P +
Sbjct: 321 SKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPVQPKNKRPRPPIEIPAFAM 380
Query: 301 PSAAS-APWSARLAQSHNLTQLS 322
+ S +PW + S L+ S
Sbjct: 381 EDSKSVSPWPVFVGYSTPLSSKS 403
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 151/222 (68%), Gaps = 31/222 (13%)
Query: 375 AIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSS 434
A++D+K++S WP G+STP SK ND + + GRK E TS RLFG +L+N +TSS
Sbjct: 379 AMEDSKSVSPWPVFVGYSTPLSSKSKNDPIPDPSNKGRKYEVPTSYRLFGFDLVNQSTSS 438
Query: 435 A-PSEKVP-----VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQS 488
+ P EKV VS T+G +++ + A DSD +K EQ
Sbjct: 439 SSPIEKVSAQPISVSRGATDGRVLAAL-PAVDSD-----------QKHEQSS-------- 478
Query: 489 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 548
TS RSRTKVQ+QG+AVGRA+DLT + GY LIDELE++FDIKGQLH R KWEIVY
Sbjct: 479 -----TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVY 533
Query: 549 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
TDDEGDMMLVGDDPW EFCNMV+RIFICSSQDVKKMSPGSKL
Sbjct: 534 TDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGSKL 575
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 309/614 (50%), Positives = 393/614 (64%), Gaps = 67/614 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTSTHGGFSVLR
Sbjct: 82 AEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF----- 234
YKPRTS +F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSK 321
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 294
SP W DS W+SLKVQWDEP++I PDRVSPWE+EP AS P QP L +NKR R
Sbjct: 322 SP-WADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDAS-NPQPPQPPL-RNKRAR---- 374
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
PP A P S L + + +++ + + + S FS++S+ ++
Sbjct: 375 -PPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPSIPASIFSASSHVEFNSK 433
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
++ P + +Q F ++ D+K S S N +E RK
Sbjct: 434 NE------PSILSNQ--FYWSMRDSKTDSF------------SASTNKARVE-----RKQ 468
Query: 415 E-TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
E T CRLFGIE+ SSA E +P ++++ G+ + +S DSD
Sbjct: 469 EPTTMGCRLFGIEI-----SSAVEEALPAATVSGVGYDQTVLSVDVDSD----------- 512
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
Q+ ++S +S RS KV MQG+AVGRA+DLT L GY L +LEEM
Sbjct: 513 ----QISQPSNGNKSDAPGTSSERSPLSPKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEM 568
Query: 532 FDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDI+G L T +W++VYTDDE DMMLVGDDPW EFC+MVKRI+I S ++ K ++P SKL
Sbjct: 569 FDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKL 628
Query: 591 PMFSIEGEDILLSS 604
P+ G+ I LSS
Sbjct: 629 PVI---GDTIKLSS 639
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/603 (51%), Positives = 389/603 (64%), Gaps = 57/603 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDTSTHGGFSVLR
Sbjct: 82 AETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV----EDFS 235
YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSGT++G+ + +
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGTIIGMGCMPANST 321
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRLSME 294
W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L K RP S
Sbjct: 322 SPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LDRTNPQPPQPPLRNKRARPPASPS 380
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
+ P P A AQ+ + + L T E +H +S+
Sbjct: 381 IAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPSSMFSSSL----- 426
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
V F+ + E N N W + + + N + T +K
Sbjct: 427 ---------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN------KAPTEKKQ 469
Query: 415 ETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISAAADSDGKSDIAK 469
E+ TS CRLFGIE+ + A S PV ++ + GH ++ A +D + A
Sbjct: 470 ESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDAESDQLSQPSHAN 522
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
+ + SP E++S+Q+ RS TKV MQGVAVGRA+DLT L GYD L +LE
Sbjct: 523 KATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLE 577
Query: 530 EMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
EMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I S ++ K ++P +
Sbjct: 578 EMFDIPGELSASLKKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKA 637
Query: 589 KLP 591
KLP
Sbjct: 638 KLP 640
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/628 (47%), Positives = 394/628 (62%), Gaps = 62/628 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTSTHGGFSVL
Sbjct: 44 AETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVL 103
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 104 RRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 163
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 164 ISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLV 223
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG D S W
Sbjct: 224 YYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQW 283
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVP 296
S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRPR E
Sbjct: 284 SGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRPREPSETI 342
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQS 355
L A W + + Q H T + ++E I H V W +H + + S+ + +
Sbjct: 343 DLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPL 401
Query: 356 DGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK------ 398
E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 402 VLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNT 460
Query: 399 -----------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 447
PN ++E G+K RLFG++L+ + +S+ T
Sbjct: 461 AACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS---------ISTTTD 505
Query: 448 EGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKV 502
+ + A+A G + + + F + +E + SP+E QS Q+ + R+R KV
Sbjct: 506 DKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKV 563
Query: 503 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 562
QM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD M VGDDP
Sbjct: 564 QMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDP 620
Query: 563 WHEFCNMVKRIFICSSQDVKKMSPGSKL 590
W EFC MV++I + +D KK+ P KL
Sbjct: 621 WLEFCQMVRKIVLYPIEDEKKIEPHPKL 648
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/628 (47%), Positives = 394/628 (62%), Gaps = 62/628 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTSTHGGFSVL
Sbjct: 81 AETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVL 140
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 141 RRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 200
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 201 ISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLV 260
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG D S W
Sbjct: 261 YYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQW 320
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVP 296
S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRPR E
Sbjct: 321 SGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRPREPSETI 379
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQS 355
L A W + + Q H T + ++E I H V W +H + + S+ + +
Sbjct: 380 DLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPL 438
Query: 356 DGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK------ 398
E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 439 VLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNT 497
Query: 399 -----------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 447
PN ++E G+K RLFG++L+ + +S+ T
Sbjct: 498 AACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS---------ISTTTD 542
Query: 448 EGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKV 502
+ + A+A G + + + F + +E + SP+E QS Q+ + R+R KV
Sbjct: 543 DKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKV 600
Query: 503 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 562
QM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD M VGDDP
Sbjct: 601 QMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDP 657
Query: 563 WHEFCNMVKRIFICSSQDVKKMSPGSKL 590
W EFC MV++I + +D KK+ P KL
Sbjct: 658 WLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/628 (47%), Positives = 394/628 (62%), Gaps = 62/628 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTSTHGGFSVL
Sbjct: 81 AETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVL 140
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 141 RRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 200
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 201 ISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLV 260
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG D S W
Sbjct: 261 YYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQW 320
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVP 296
S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRPR E
Sbjct: 321 SGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRPREPSETI 379
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQS 355
L A W + + Q H T + ++E I H V W +H + + S+ + +
Sbjct: 380 DLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPL 438
Query: 356 DGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK------ 398
E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 439 VLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNT 497
Query: 399 -----------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 447
PN ++E G+K RLFG++L+ + +S+ T
Sbjct: 498 AACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS---------ISTTTD 542
Query: 448 EGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKV 502
+ + A+A G + + + F + +E + SP+E QS Q+ + R+R KV
Sbjct: 543 DKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKV 600
Query: 503 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 562
QM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD M VGDDP
Sbjct: 601 QMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDP 657
Query: 563 WHEFCNMVKRIFICSSQDVKKMSPGSKL 590
W EFC MV++I + +D KK+ P KL
Sbjct: 658 WLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 300/628 (47%), Positives = 394/628 (62%), Gaps = 62/628 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEV+AQITL P+P Q N PT PDP + PRP VHSF K+LT SDTSTHGGFSVL
Sbjct: 77 AETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKILTPSDTSTHGGFSVL 136
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ +TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 137 RRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 196
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
++GD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 197 ISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLV 256
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+S+NKYL A F VGMR+KM FEGED P ++FSGT+VG D S W
Sbjct: 257 YYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVKKFSGTIVGEGDLSLQW 316
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA--KNKRPRLSMEVP 296
S+W+SLKVQWDE ++ P+RVSPWEIE +A P + P+ + KNKRPR E
Sbjct: 317 SGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTA-PAINVPLQSATKNKRPREPSETI 375
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNH-VAWHHKHSDFSSNSNFMSRTQS 355
L A W + + Q H T + ++E I H V W +H + + S+ + +
Sbjct: 376 DLQSLEPAQEFWLSGMPQQHEKTGIG-SSEPNCISGHQVVWPGEHPGYGAVSSSVCQNPL 434
Query: 356 DGE-WL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK------ 398
E WL SP + + SQ++FQ + I+ WPA S + P+
Sbjct: 435 VLESWLKDFNSSNKGVSPTLSEISQKIFQ-VTSNEARIATWPARSAYQAEEPTSKLSSNT 493
Query: 399 -----------PNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTT 447
PN ++E G+K RLFG++L+ + +S+ T
Sbjct: 494 AACGYRTEEVAPNASKVVE----GKKEP--AMFRLFGVDLMKCTS---------ISTTTD 538
Query: 448 EGHIISTISAAADSDGKSDIAKE---FKEKKQEQVQV--SPKESQSKQSCLTSNRSRTKV 502
+ + A+A G + + + F + +E + SP+E QS Q+ + R+R KV
Sbjct: 539 DKSSVGAGEASAKGTGSHEDSGQLSAFSKVTKEHIAADESPQEIQSHQN--YTARTRIKV 596
Query: 503 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 562
QM G AVGRA+DL L GY+ L++ELEEMF+IK + KW++ +TDDEGD M VGDDP
Sbjct: 597 QMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK---DLKQKWKVAFTDDEGDTMEVGDDP 653
Query: 563 WHEFCNMVKRIFICSSQDVKKMSPGSKL 590
W EFC MV++I + +D KK+ P KL
Sbjct: 654 WLEFCQMVRKIVLYPIEDEKKIEPHPKL 681
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/612 (48%), Positives = 388/612 (63%), Gaps = 46/612 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTSTHGGFSVL
Sbjct: 78 AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVL 137
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 138 RRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 197
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 198 IAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIRTHSIFLV 257
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV D SP W
Sbjct: 258 YYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQW 317
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVP 296
+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKRPR + E
Sbjct: 318 QGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKRPRETAEGL 376
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS- 355
+ A W + + H T +S ++E K + VAW + + +S+ S+ + + +
Sbjct: 377 DIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSSSICQNSAV 432
Query: 356 DGEWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLE 406
G W + P + + SQ+LFQ +D + + WP S + P SK + +T L
Sbjct: 433 TGSWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALC 491
Query: 407 QVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST 454
+T K E G RLFG+ LINHA SSA ++K V + T +
Sbjct: 492 SYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGETSARAAGS 550
Query: 455 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 514
DS S + K+ V SP+E QS QSC S RSR KVQM G V RA+D
Sbjct: 551 FE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVD 601
Query: 515 LTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKR 572
L L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW EFC MV++
Sbjct: 602 LGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRK 660
Query: 573 IFICSSQDVKKM 584
I I S D M
Sbjct: 661 IVIHSIGDRGHM 672
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 299/612 (48%), Positives = 387/612 (63%), Gaps = 46/612 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTSTHGGFSVL
Sbjct: 78 AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVL 137
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 138 RRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 197
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD FV+LR E G+ VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 198 IAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIRTHSIFLV 257
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV D SP W
Sbjct: 258 YYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQW 317
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVP 296
+ S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKRPR + E
Sbjct: 318 QGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKRPRETAEGL 376
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS- 355
+ A W + + H T +S ++E K + VAW + + +S+ S+ + + +
Sbjct: 377 DIHALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSSSICQNSAV 432
Query: 356 DGEWLTS-------PRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLE 406
G W P + + SQ+LFQ +D + + WP S + P SK + +T L
Sbjct: 433 TGSWFKGFNSSGSLPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALC 491
Query: 407 QVET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST 454
+T K E G RLFG+ LINHA SSA ++K V + T +
Sbjct: 492 SYQTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGETSARAAGS 550
Query: 455 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 514
DS S + K+ V SP+E QS QSC S RSR KVQM G V RA+D
Sbjct: 551 FE---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVD 601
Query: 515 LTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKR 572
L L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW EFC MV++
Sbjct: 602 LGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRK 660
Query: 573 IFICSSQDVKKM 584
I I S D M
Sbjct: 661 IVIHSIGDRGHM 672
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 305/603 (50%), Positives = 386/603 (64%), Gaps = 58/603 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L P+ Q+EPT+PDP P + R +HSF K LTASDTSTHG SVLR
Sbjct: 82 AETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHSFCKTLTASDTSTHG-LSVLR 140
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 141 RHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 200
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 201 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 260
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV----EDFS 235
YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERRFSG ++G+ + +
Sbjct: 261 YKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGIIIGMGCMPANST 320
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRLSME 294
W +S+WRSLKVQWDEP++I RPDRVSPWE+EP + P QP L K RP S
Sbjct: 321 SPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP-LNRTNPQPPQPPLRNKRARPPASPS 379
Query: 295 VPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQ 354
+ P P A AQ+ + + L T E +H +S+
Sbjct: 380 IAPELAPVFGFWKSPAEPAQAFSFSGLQRTQE---------LYHSSPSSMFSSSL----- 425
Query: 355 SDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
V F+ + E N N W + + + N + T +K
Sbjct: 426 ---------NVGFNPKY--EGPTPNTNHLYWTMRETRTESYSASIN------KAPTEKKQ 468
Query: 415 ETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGH----IISTISAAADSDGKSDIAK 469
E+ TS CRLFGIE+ + A S PV ++ + GH ++ A +D + A
Sbjct: 469 ESTTSGCRLFGIEIGSSAVS-------PVVTVASVGHDPPPPALSVDAESDQLSQPSHAN 521
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
+ + SP E++S+Q+ RS TKV MQGVAVGRA+DLT L GYD L +LE
Sbjct: 522 KATDAPAASSDRSPNETESRQA-----RSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLE 576
Query: 530 EMFDIKGQLH-TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
EMFDI G+L + KW+++YTDDE DMMLVGDDPW EFC MVKRI+I S ++ K ++P +
Sbjct: 577 EMFDIPGELSASLNKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLTPKA 636
Query: 589 KLP 591
KLP
Sbjct: 637 KLP 639
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 298/616 (48%), Positives = 379/616 (61%), Gaps = 84/616 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPEP Q E T+PDP + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 88 AESETDEVYAQITLLPEPDQGEITSPDPPLPEPEKCTVHSFCKTLTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM+Q P QELVA DLHG EW F+HIFRGQPRRHLLTTGWS FV++K+LV
Sbjct: 148 RHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSAKKLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRG++GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA+ T T+F V+
Sbjct: 208 AGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIMTGTLFSVF 267
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHW 238
YKPRTSQ FI+S+NKYLEA N+K +VGMR+KMRFEGE+ PERRFSGT+VGV D S W
Sbjct: 268 YKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNPSSRW 327
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR---------- 288
DS+WRSLKV WDEP+SI RPDRVSPW++EP VA ATP QP +NKR
Sbjct: 328 PDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVA-ATPTNTQPP-QRNKRARPSVLPSPV 385
Query: 289 ---PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 345
P L M P+D PS+ S +R + +LS A K +
Sbjct: 386 QELPALGMWKSPVDSPSSFSYCDPSRGRDLYPSPKLSSAA-------------KGLGYGE 432
Query: 346 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 405
N + T++ ++ + + S PA +P N L
Sbjct: 433 NGSMPLSTKT---------------MYWSSQSETCTESVAPASE-------KRPANGCRL 470
Query: 406 EQVETGRKTETGTSCRLFGIELINHATS----SAPSEKVPVSSLTTEGHIISTISAAADS 461
+E L I+ ++S SA E PV SL + S
Sbjct: 471 FGIE------------LLDCPTIDESSSVAMPSAVVEDQPVPSLNVD------------S 506
Query: 462 DGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
D S+ + E + S + + QS + ++ +Q + V GRA+DLT L Y
Sbjct: 507 DRNSEPSNPIPSVSCEPEKSSLRSTHESQSKQIRSCTKVHMQGKAV--GRAVDLTRLDSY 564
Query: 522 DHLIDELEEMFDIKGQLHTRT-KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ +LE MF+I+G+L T KW++VYTDDE DMM+VGDDPWH FC+MV++I++ ++++
Sbjct: 565 EDLLKKLEVMFEIEGELRGSTKKWQVVYTDDEDDMMMVGDDPWHGFCSMVRKIYVYTAEE 624
Query: 581 VKKMSPGSKLPMFSIE 596
KK+SP KLP+ ++
Sbjct: 625 AKKLSPKIKLPVVDVK 640
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 299/603 (49%), Positives = 383/603 (63%), Gaps = 41/603 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDE+YAQITL PEP Q + PT PDP ++ RP VHSF K+LT SDTSTHGGFSVL
Sbjct: 75 AETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPSDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 135 RRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++F+V
Sbjct: 195 IAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFLV 254
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+SLNKYLE+ F VGMR+KM FEGED P ++FSGTVV D SPHW
Sbjct: 255 YYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVKKFSGTVVDKGDLSPHW 314
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL---VQPVLAKNKRPRLSMEV 295
+ S W++LKV+WDE + P+RVS WEIEPF ASA P + VQP + KNKRPR + E
Sbjct: 315 QGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASA-PAINIPVQPSM-KNKRPRETAES 372
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
+ A W + + H T +S + + VAW + +S+ S+ + + +
Sbjct: 373 LDIHALEPAQEFWLSGRPEQHK-TSISSNEPNCISVHQVAWTSERPGYSAMSSSICQNSA 431
Query: 356 -DGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPH-PSKPNNDT 403
G W SP + + SQ+LFQ +D + + WP S + SK + +T
Sbjct: 432 VIGSWFKDFNSSSKGASPSLPEISQKLFQVTSNDAR-VPPWPGLSAYQAEELSSKLSCNT 490
Query: 404 LLEQVET-----------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 452
L +T K E G RLFG+ L+NH SS ++K+ V T
Sbjct: 491 ALCSYQTEEVAPKFSIAVEEKKEPGM-FRLFGVNLVNHTRSSGIADKMTVGVGETSMRGA 549
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 512
+ + S + K+ E SP+E QS QSC S R+R KVQM G AVG+A
Sbjct: 550 GSFEDSGQLSALSRVTKDHTHLVNE----SPREIQSHQSC--SGRNRIKVQMHGHAVGKA 603
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 572
+DL L GY L+ ELEEMF+IK L ++ +W++ +T+DE D M VG W EFC MV++
Sbjct: 604 VDLGNLDGYVQLMGELEEMFEIK-DLGSKEEWKVTFTNDENDTMEVGAVLWQEFCQMVRK 662
Query: 573 IFI 575
I I
Sbjct: 663 IVI 665
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 305/647 (47%), Positives = 388/647 (59%), Gaps = 86/647 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP--RPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQ+TL+PEP+Q+E TT + SP RP V+SF K LTASDTSTHGGFSV
Sbjct: 107 AEPDTDEVYAQLTLIPEPNQDE-TTLEKETVQSPPRRPHVYSFCKTLTASDTSTHGGFSV 165
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLP LDM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+SKR
Sbjct: 166 LRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSAFVSSKR 225
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQQ++MP+SVISS SMHLGVLATA HA +T TMF
Sbjct: 226 LVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMHAFSTGTMFS 285
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
V+Y+PRT S+F+I ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VGVED+ S
Sbjct: 286 VFYRPRTSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGEETPEQRFTGTIVGVEDYDSN 345
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ-PVLAKNKRPRLSMEV 295
W SKWR LKVQWDE +S+ RP RVSPW+IEP SA P + P + + KRPR
Sbjct: 346 RWPASKWRCLKVQWDEQSSVERPLRVSPWKIEP---SAAPTAINPPPIPRAKRPR----- 397
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRI-DNHVAWHHKHSDFSSNSNFMSRTQ 354
++PS + +R +T+ S + FSS +N Q
Sbjct: 398 --TNVPSPSDVSHLSREGLPRGMTEHSQPPRYPGVLQGQEGMALVGGPFSSGTNNPQSHQ 455
Query: 355 SDGEWLT------------SPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSK---- 398
W P + L E+ KN P+H P P +
Sbjct: 456 KSSMWAPPLLPPKEDPYPHPPHPNWMSLLRSESPFTGKNP---PSHWA-PFPFPGEKAWP 511
Query: 399 PNNDTLL----EQVETGRKTETGTSCRLFGIELINHATSSA-------PSEKVPVSSLTT 447
P LL +Q G ++G C+LFGI L H T A PS L T
Sbjct: 512 PLGPALLVGREDQKPLGGGLQSG-GCKLFGINLFEHQTEVASHGIAGFPSRGQQQVVLRT 570
Query: 448 ------EGHIISTISAA----ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 497
EG +S S AD+ G +D + P ++QS TS R
Sbjct: 571 PPPVGLEGDQVSEQSKGGGKSADTGGDTD-------------RPLPHKAQS-----TSTR 612
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 556
S TKV MQG A+GR++DLT GY L+ EL+ MF +G+L K W++VYTDDEGDMM
Sbjct: 613 SCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGELMDPMKGWQVVYTDDEGDMM 672
Query: 557 LVGDDPWHEF---CNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI 600
LVGDDPW + C MV++I+I + ++V++M P S S +G D+
Sbjct: 673 LVGDDPWQRYREXCVMVRKIYIYTREEVQRMRPRS----MSQKGHDV 715
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 289/603 (47%), Positives = 365/603 (60%), Gaps = 71/603 (11%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 62
E ++DEVYAQI L P+ Q+E T+ P P + R +HSF K LTASDTSTHGGFSVLR+
Sbjct: 137 EADSDEVYAQIMLQPQDEQSELTSAGP-PQELERGTIHSFCKTLTASDTSTHGGFSVLRR 195
Query: 63 HATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVA 122
HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLVA
Sbjct: 196 HAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVA 255
Query: 123 GDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYY 182
GD F+FLRG NGEL VGVR RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+Y
Sbjct: 256 GDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVFY 315
Query: 183 KPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF----SP 236
KPRT S+F++S+NKYLEA +VGMR+KM+FEG+++ ERRFSGT+VG+ S
Sbjct: 316 KPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIVGMGSTPTMPSS 375
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
W DS W+SLKVQWDEP+SI RPDRVS WE+EP + SA P +P L +NKR R
Sbjct: 376 QWADSDWKSLKVQWDEPSSILRPDRVSLWELEP-LDSANPQTPEPPL-RNKRARA----- 428
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 356
L S + P D N
Sbjct: 429 ---LASPSVVP----------------------------------DLPPNFGLWKSPSEP 451
Query: 357 GEWLTSPRVKFSQQLFQEAIDDNKNIS----AWPAHSGHSTPHPSKPNNDTLLEQVETGR 412
+ L+ + +++LF +I + N+ WP + + N T E
Sbjct: 452 SQTLSFSEPQRARELFPTSIFSSTNVMFDQFYWPGRETKDGSYAASTNKVT----AERKH 507
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK-EF 471
+ T CRLFGIE+ SS E PV + + H + S DS S +
Sbjct: 508 EPTTTGGCRLFGIEI-----SSTVEETQPVVTASVGDHDQTAASVDMDSSVLSQPSNINN 562
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+ + + E+QS+Q RS TKV M+G+AVGRA+DL L GY L +LEEM
Sbjct: 563 SDAPAGSSERALLETQSRQV-----RSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEM 617
Query: 532 FDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDI G+L T +W++VY DDE DMMLVGDDPW EFC MVKRI+I S ++ K+++P +K
Sbjct: 618 FDIHGELCSTLKRWQVVYADDEDDMMLVGDDPWDEFCGMVKRIYIYSYEEAKQLAPKAKT 677
Query: 591 PMF 593
P+
Sbjct: 678 PVI 680
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 287/627 (45%), Positives = 383/627 (61%), Gaps = 59/627 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEVYAQITL P+ Q++ P DP ++PRP VH+F K+LT SDTSTHGGFSVL
Sbjct: 136 AETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTFCKILTPSDTSTHGGFSVL 195
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM TPTQE+++KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 196 RRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 255
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD FV+LR E GE VGVR L ++QS+MP+SVISSQSMHLGVLA+ASHA+ T ++FVV
Sbjct: 256 MAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASHAIKTNSIFVV 315
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+S+NKY A F VGMR++M FE ED P ++F GT+VG DFSP W
Sbjct: 316 YYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDFSPQW 375
Query: 239 KDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--ATPNLVQPVLAKNKRPRLSMEV 295
S+W+SLKVQWD+ +I P+RVSPWEI+ S A L+Q AKNKRPR + E
Sbjct: 376 SGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAISTLLQSS-AKNKRPRETNE- 433
Query: 296 PPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRID----NHVAWHHKHSDF---SSN 346
++LPS W + + Q H T + +++ RI + + W +H+ + SS+
Sbjct: 434 -NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGSGYHQILWPSEHAGYGAMSSS 491
Query: 347 SNFMSRTQSDGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAH--SGHSTP 394
S + W SP + + +Q+L + A + + W G+
Sbjct: 492 SVCQTPLGLGDGWFKDFNTSSQGVSPTLSEITQKLNRVASSEGRAPPPWATALCGGYRAE 551
Query: 395 HPSK--------PNNDTLLEQV-----ETGRKTETGTSCRLFGIELINHATSSAPSEKVP 441
P+ P L EQV + K + RLFG+ L+ + ++A +
Sbjct: 552 EPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMVRLFGVNLMENTNNAAAATAGN 611
Query: 442 --VSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR 499
V + T I ++ + S + K E SP+E QS+QS + R+R
Sbjct: 612 ASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE--------SPREIQSQQSSI--GRNR 661
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK + +++ + D+EGD M VG
Sbjct: 662 VKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK---DIKQNFKVAFNDNEGDTMKVG 718
Query: 560 DDPWHEFCNMVKRIFICSSQDVKKMSP 586
DDPW EFC MV++I I +D K M P
Sbjct: 719 DDPWMEFCRMVRKIVIYPIEDDKNMDP 745
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 279/580 (48%), Positives = 357/580 (61%), Gaps = 81/580 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E+ +DE YA+ITL+P+ PT D + RP V+SF+KVLTASDTS HGGFSV R
Sbjct: 90 VEKNSDETYAEITLMPDTQVVIPTQND----NHYRPLVNSFTKVLTASDTSVHGGFSVPR 145
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
K A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLT+GW+ F TSK+LV
Sbjct: 146 KLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNAFTTSKKLV 205
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD VFLRGE GEL VG+R QQ ++ SS+IS SM GV+A+A HA Q MF+V
Sbjct: 206 AGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVHAFNNQCMFIVV 265
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR+SQFI+S NK+++AVNNKF VG R+ MRFEGED ERR+SGT++GV +FS HW +S
Sbjct: 266 YKPRSSQFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSERRYSGTIIGVNNFSSHWMES 325
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
+WRSL+V+WDE AS RPD+VSPW+IE S N+++P L KNKR R E+
Sbjct: 326 EWRSLEVKWDEFASFPRPDKVSPWDIEHLTPSL--NVLRPSLLKNKRSREVNEI-----G 378
Query: 302 SAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLT 361
S +S L Q + + S+T S + F+S
Sbjct: 379 STSSHLLHPILTQGQEIGEPSMT-------------------SPMNVFLS---------- 409
Query: 362 SPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKP----NNDTLLEQVETGRKTETG 417
+ + I+D++ P+ S P+ P NND ++ +E T
Sbjct: 410 ----------YCDEIEDDET----PSRMLMSYHVPTMPKLNYNNDQMVTPIEENITTNAN 455
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK-- 475
S RLFG+ L ATSS K P+ + +S KS+I+K +EKK
Sbjct: 456 ASFRLFGVSL---ATSSVI--KDPIEPM--------------ESYPKSEISKLCQEKKLG 496
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
Q SP+E QSKQ +S RS TKVQMQGV VGRALDL L GYDHLI ELE++FD+
Sbjct: 497 LGQTITSPREIQSKQ--FSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLN 554
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
GQL TR +W+I + D+EG+ LVGD+PW EFC+MVK+IFI
Sbjct: 555 GQLQTRNQWKIAFKDNEGNEKLVGDNPWPEFCSMVKKIFI 594
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/584 (46%), Positives = 360/584 (61%), Gaps = 79/584 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +GGFSV
Sbjct: 89 VENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+TSK+L
Sbjct: 145 KKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q +F+V
Sbjct: 205 VKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIV 264
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK
Sbjct: 265 VYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHWKC 324
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R E
Sbjct: 325 SEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLREVNE-----F 377
Query: 301 PSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
S++S L Q + QLSV +S N R + E
Sbjct: 378 GSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISLRYRDTTE-- 415
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSC 420
A++ ++ + ++P P P N+ ++ Q+E T+ GT+
Sbjct: 416 -------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAGTNF 457
Query: 421 RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QEQ 478
RLFG+ L + P K P+ + SDI+K + KK Q Q
Sbjct: 458 RLFGVTL-----DTPPMIKDPIKQIG------------------SDISKLTERKKFGQSQ 494
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL
Sbjct: 495 TLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL 552
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 553 QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 278/604 (46%), Positives = 364/604 (60%), Gaps = 93/604 (15%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLTASDTS HG
Sbjct: 47 VERNSDETYAEITLMPNTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTSAHG 97
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLTTGW+ F+
Sbjct: 98 GFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFI 157
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VFLRGE GEL V +R QQ ++PSS+IS +SM GV+A+A HA Q
Sbjct: 158 TSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIASAKHAFDNQ 217
Query: 176 TMFVVYYKP----------RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
MF+V YKP R+SQFI++ +K+L+AVNNKF VG R+ MRFE E+ ERR+
Sbjct: 218 CMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEENFSERRYF 277
Query: 226 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
GT++GV DFSPHWK S+WRSLKVQWDE AS RPD+VSPWEI+ ++ + N++ + K
Sbjct: 278 GTIIGVSDFSPHWKCSEWRSLKVQWDEFASFPRPDKVSPWEIKH--STPSSNVLPSSMLK 335
Query: 286 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 345
NKR R E+ S++S L Q + Q S+T+ ++ +++ D S+
Sbjct: 336 NKRSREFNEI-----GSSSSHLLPPILTQGQEIGQPSMTSP---MNVPLSYRDAIEDDST 387
Query: 346 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 405
S + T PR+ + NND ++
Sbjct: 388 PSRLLMSYSVQ----TMPRLNY--------------------------------NNDQIV 411
Query: 406 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 465
+E G SCR+FG+ L ++ P K P+ + DSD
Sbjct: 412 TPIEGNITNNGGASCRVFGVSL-----ATPPVIKDPIEQI--------------DSDPNL 452
Query: 466 DIAKEFKEKKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 524
+I+K +EK Q+ S +E QSKQ L+S R+ TKVQM GV +GRALDL+ L GYD L
Sbjct: 453 EISKLSQEKIFGLGQMRSTREIQSKQ--LSSTRTCTKVQMHGVTLGRALDLSVLNGYDQL 510
Query: 525 IDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
I ELE++FD+KGQL R +WEIV+TD+E D MLVGDDPW EFCNMVK+I I S ++VK
Sbjct: 511 ILELEKLFDLKGQLQNRNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIYSKEEVKNF 570
Query: 585 SPGS 588
G+
Sbjct: 571 KSGN 574
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/588 (45%), Positives = 362/588 (61%), Gaps = 78/588 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +GGF V
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYGGFFVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+KHA ECLPPLDM+Q P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F TSK+L
Sbjct: 145 KKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q +F+V
Sbjct: 205 VKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIV 264
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YKPR+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHWK
Sbjct: 265 VYKPRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFSPHWKC 324
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME----VP 296
S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R ++E +
Sbjct: 325 SEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLRETLEYLLNIL 382
Query: 297 PLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD 356
L S++S L Q + QLSV + N++ R ++
Sbjct: 383 VLYTCSSSSHILPPILTQGQEIGQLSVAS------------------PMNTSLRYRDTTE 424
Query: 357 GEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTET 416
+A++ ++ + ++P P P N+ ++ Q+E T+
Sbjct: 425 -----------------DAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKA 462
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEK 474
T+ RLFG+ L P E++ SDI+K E K+
Sbjct: 463 VTNFRLFGVSLAIPLVIKDPIEEI-----------------------GSDISKLTEGKKF 499
Query: 475 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
Q Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+
Sbjct: 500 GQSQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDL 557
Query: 535 KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
KGQL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 558 KGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/306 (83%), Positives = 271/306 (88%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ+TDEVYAQITL+PE Q EPT+PD ++ PRP VHSF KVLTASDTSTHGGFSVL
Sbjct: 67 LAEQDTDEVYAQITLIPESDQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTHGGFSVL 126
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 127 RKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 186
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+FVFLRGENGEL VGVR +A QQSSMPSSVISSQSMHLGVLATASHAV+T T+FVV
Sbjct: 187 VAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVSTLTLFVV 246
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFIISLNKYLEAV+NKF VGMR+KMRFEGEDSP+RRFSGT+VGVEDFSPHW D
Sbjct: 247 YYKPRTSQFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRRFSGTIVGVEDFSPHWND 306
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDL 300
SKWRSLKVQWDEPA I RPDRVSPWEIEP VAS NL QPV KNKRPR E+P L
Sbjct: 307 SKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPRPPFEIPALGY 366
Query: 301 PSAASA 306
+ S+
Sbjct: 367 STPLSS 372
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 144/195 (73%), Gaps = 22/195 (11%)
Query: 390 GHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEG 449
G+STP SK ND +L+ + GRK+E TS RLFGI+L+NH++SS P E VP ++
Sbjct: 365 GYSTPLSSKSKNDAILDPSDKGRKSEVPTSYRLFGIDLVNHSSSSTPIE-VPAQLMS--- 420
Query: 450 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 509
I ++S KE+K EQ+Q SPKE QSKQS TS RSRTKVQMQG+AV
Sbjct: 421 --ICSVS---------------KEQKPEQLQKSPKEIQSKQSS-TSTRSRTKVQMQGIAV 462
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 569
GRA+DLT L GY LIDELE++FDIKGQLH R KWEIVYTDDEGDMMLVGDDPW EFCNM
Sbjct: 463 GRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNM 522
Query: 570 VKRIFICSSQDVKKM 584
V+RI+ICSSQDVK+M
Sbjct: 523 VRRIYICSSQDVKRM 537
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/592 (44%), Positives = 363/592 (61%), Gaps = 80/592 (13%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 62
+Q TD+VYA+I L+P+ + + TP D+ RP V+SFSK+LT+SD +THGG S+L++
Sbjct: 90 DQNTDDVYAEIYLMPDTT--DVITP-ITTMDNQRPMVYSFSKILTSSDANTHGGLSILKR 146
Query: 63 HATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVA 122
HATECLPPLDM+Q TP Q LVAKDLHG EW FKH FRG PRRHL T+GWS F T+KRL+
Sbjct: 147 HATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFATTKRLIV 206
Query: 123 GDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYY 182
GD FVFLRGENGEL VG+R Q PS VIS+Q M GV+A+ +A ++ F+V Y
Sbjct: 207 GDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKCKFIVVY 266
Query: 183 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSK 242
KP +SQF+++ +K+++A+NNKF VG R++MRFEG+D E+R+SGT++GV D SPHWKDS+
Sbjct: 267 KPSSSQFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVNDMSPHWKDSE 326
Query: 243 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 302
WRSL+VQWDE + RPD+VSPWEIE + S++ + QP + + KR R E+
Sbjct: 327 WRSLQVQWDELSPFPRPDKVSPWEIEHLIPSSS--ISQPTVLQKKRARQCNEIG------ 378
Query: 303 AASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS 362
S++SN ++ + L+S
Sbjct: 379 -----------------------------------------STSSNLLTGQEIGQSSLSS 397
Query: 363 PRV--KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDT--LLEQVETGRKTETGT 418
P+ +FS ++A++D+K S W P KPNN+ L++Q + TE T
Sbjct: 398 PKSVPEFS---CRDAVEDSKFPSDWLM--SDLVPAIPKPNNNNNQLVQQTKEKITTEATT 452
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
SC LFG++L + + P + + TT S I + K+ Q
Sbjct: 453 SCILFGVDLTKASKTKDPMGPIEATETTT-----------------SCILSQDKKLDQTL 495
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
SPKE QS S S R R KVQMQGV +GRA+DLT GY+ LI +LEE+FD+K +L
Sbjct: 496 TWTSPKEVQS--SKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLEELFDLKDEL 553
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+R +WEIV+ ++EG++M +GDDPW EFCNM K+IFI S ++++KM +K+
Sbjct: 554 RSRNQWEIVFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKMKSRNKV 605
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/586 (46%), Positives = 360/586 (61%), Gaps = 81/586 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +GGFSV
Sbjct: 101 VENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYGGFSVP 156
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+TSK+L
Sbjct: 157 KKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKL 216
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q +F+V
Sbjct: 217 VKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIV 276
Query: 181 YYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHW
Sbjct: 277 VYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFSPHW 336
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
K S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R E
Sbjct: 337 KCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLREVNE---- 390
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
S++S L Q + QLSV +S N R + E
Sbjct: 391 -FGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNISLRYRDTTE 429
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
A++ ++ + ++P P P N+ ++ Q+E T+ GT
Sbjct: 430 ---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAGT 469
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--Q 476
+ RLFG+ L + P K P+ + SDI+K + KK Q
Sbjct: 470 NFRLFGVTL-----DTPPMIKDPIKQIG------------------SDISKLTERKKFGQ 506
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
Q SP E QSKQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIKG
Sbjct: 507 SQTLRSPIEIQSKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKG 564
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
QL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 565 QLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 272/580 (46%), Positives = 358/580 (61%), Gaps = 87/580 (15%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS G
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTS--G 137
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTGW+ F
Sbjct: 138 GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 197
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A HA Q
Sbjct: 198 TSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQ 257
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV DFS
Sbjct: 258 CMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSDFS 317
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KNKR R E+
Sbjct: 318 PHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKNKRLREVNEI 375
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
S++S L Q + QLSV + N + R +
Sbjct: 376 -----GSSSSHLLPPILTQGQEIGQLSVAS------------------PMNISLTYRDTT 412
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
+ + ++ ++ + ++P P P N+ ++ Q+E T+
Sbjct: 413 E-----------------DVMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTK 450
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TGT+ RLFG+ L+ + P E++ G IS ++ E K+
Sbjct: 451 TGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT-------------EGKKFG 489
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI ELEE+FD+K
Sbjct: 490 QSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLK 547
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
GQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 548 GQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/621 (45%), Positives = 384/621 (61%), Gaps = 52/621 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ET+EVYAQITLLPE Q P++PDP + RP VHSFSK+LT SDTSTHGGFSVL
Sbjct: 77 AEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILTPSDTSTHGGFSVL 136
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ TPTQEL+ KD+ G EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 137 RRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 196
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD FV+LR E GE VGVR +++++MPSSV+SSQSMHLGVLA+ASHA+ T+++F+V
Sbjct: 197 VYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLASASHALQTKSIFLV 256
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YY+PR SQ+I+++NKY ++ VG+R+KM FEGE+ P ++FSGT+VG SP W
Sbjct: 257 YYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVPVKKFSGTIVGDGALSPQW 316
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL---AKNKRPRLSMEV 295
S+W+S KVQWD+PA+ P+RVSPWEIEP +A+ + + L +NKRPR + E
Sbjct: 317 SCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVPLQSSIRNKRPRETTE- 375
Query: 296 PPLDLPSAASAPWSARLA---QSHNLTQLSVTAEDKRI-DNHVAW-HHKHSDFSS--NSN 348
LDL S L+ + H+ + ++ I N V W + + +S+ +S+
Sbjct: 376 -DLDLQSLNPTTQEFSLSGMPRQHDKIGDGPSNPNRMIPGNQVIWPGERAAGYSAVGSSS 434
Query: 349 FMSRTQSDGEWL---------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPS- 397
F + WL SP + + SQ+L+Q +D + + WP + P+
Sbjct: 435 FCQKPLVRESWLEEFNLSRQAMSPTLSEISQKLYQVTRNDAR-AAPWPVLPAYQAQQPAL 493
Query: 398 -KPNNDTL-----------LEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 445
P N L L +V T + E G RLFG+ L+ + +A ++ +
Sbjct: 494 RLPCNTALHSYRTEEAAPSLPKV-TEKSKEPGM-VRLFGVNLMKPTSGTATADNAGAGAG 551
Query: 446 TTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQ 505
T + + S + K+ K V SP+E QS QSC+ R+R KVQM
Sbjct: 552 ETSARVAGPCEESGQVSALSRVTKDHK-----VVNESPREIQSNQSCIA--RNRVKVQMH 604
Query: 506 GVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHE 565
G AVGRA+DL L GY+ LI ELE+MFDIK + +++ + D++GD M VGDDPW E
Sbjct: 605 GNAVGRAVDLANLDGYEQLIRELEQMFDIK---DIKQNFKVAFADNDGDTMKVGDDPWME 661
Query: 566 FCNMVKRIFICSSQDVKKMSP 586
FC MVK+I I ++ +KM P
Sbjct: 662 FCRMVKKIVIYPLEE-EKMEP 681
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/582 (45%), Positives = 354/582 (60%), Gaps = 89/582 (15%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD S +G
Sbjct: 89 VENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDISANG 139
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTGW+ F
Sbjct: 140 VFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFT 199
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 259
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV +FS
Sbjct: 260 CMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFS 319
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KNKR R E
Sbjct: 320 PHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLREVNE- 376
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
S++S L Q + QLSV + N + + R +
Sbjct: 377 ----FGSSSSHLLPPILTQGQEIGQLSVAS------------------PMNISLLYRETT 414
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
+ +A++ ++ + ++P P P + N+ ++ Q+E T+
Sbjct: 415 E-----------------DAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTK 452
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKE 473
GT+ RLFG+ L ++ P K P+ + SDI+K E K+
Sbjct: 453 AGTNFRLFGVSL-----ATPPVIKDPIEQI------------------GSDISKLTEGKK 489
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD
Sbjct: 490 FGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 548 LKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/587 (44%), Positives = 354/587 (60%), Gaps = 94/587 (16%)
Query: 2 AEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD
Sbjct: 89 VENNSDETYAKITLMPDTTVSENLQVVIPTQNE---------NQFRPLVNSFTKVLTASD 139
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
S +G FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTG
Sbjct: 140 ISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTG 199
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
W+ F TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A H
Sbjct: 200 WNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKH 259
Query: 171 AVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
A Q MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++G
Sbjct: 260 AFDNQCMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIG 319
Query: 231 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
V +FSPHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KNKR R
Sbjct: 320 VSNFSPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLR 377
Query: 291 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 350
E S++S L Q + QLSV + N + +
Sbjct: 378 EVNE-----FGSSSSHLLPPILTQGQEIGQLSVAS------------------PMNISLL 414
Query: 351 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 410
R ++ +A++ ++ + ++P P P + N+ ++ Q+E
Sbjct: 415 YRETTE-----------------DAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEE 452
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK- 469
T+ GT+ RLFG+ L ++ P K P+ + SDI+K
Sbjct: 453 NITTKAGTNFRLFGVSL-----ATPPVIKDPIEQI------------------GSDISKL 489
Query: 470 -EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
E K+ Q Q SP + QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI EL
Sbjct: 490 TEGKKFGQSQTLRSPTKIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 547
Query: 529 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
E++FD+KGQL TR +W+I++T + D MLVGDDPW EFCNMVKRI+I
Sbjct: 548 EKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 262/587 (44%), Positives = 357/587 (60%), Gaps = 82/587 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E +DE YA+ITL+P+ +Q T + + RP V+SF+KVLTASDTS HGGFSV +
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGGFSVPK 145
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLPPLDM+Q PTQE++A DLHG +WRF+HI+RG +RHLLT GW+ F TSK+LV
Sbjct: 146 KHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLV 205
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
GD VF+RGE GEL VG+R QQ ++PSS++S +SM G++A+A HA Q MF+V
Sbjct: 206 EGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVV 265
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR+SQFI+S +K+L+ VNNKF VG R+ MRFEG+D ERR GT++GV DFSPHWK S
Sbjct: 266 YKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCS 325
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKRPRLSMEVPPLD 299
+WRSL+VQWDE AS RP++VSPW+IE TP N+ + KNKR R E+
Sbjct: 326 EWRSLEVQWDEFASFPRPNQVSPWDIEHL----TPWSNVSRSSFLKNKRSREVNEI---- 377
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
S++S L Q + Q S+ ++ N R +
Sbjct: 378 -GSSSSHLLPPTLTQGQEIGQQSM--------------------ATPMNISLRYRD---- 412
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
+ ++A+ ++ + ++P +K N + ++ +E T S
Sbjct: 413 -----------ITEDAMTPSRLLMSYPVQPM------AKLNYNNVVTPIEENITTNAVAS 455
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QE 477
RLFG+ L + P E++ + +I++ +EKK Q
Sbjct: 456 FRLFGVSLATPSVIKDPVEQIGL-----------------------EISRLTQEKKFGQS 492
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
Q+ SP E QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQ
Sbjct: 493 QILRSPTEIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQ 550
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
L R +WEI +T++E D MLVG+DPW EFCNMVK+IFI S ++VK +
Sbjct: 551 LQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/290 (77%), Positives = 251/290 (86%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ++DEVYAQI LLPE Q EPT+PD + PRPKVH F KVLTASDTSTHGGFS+L
Sbjct: 92 LAEQDSDEVYAQIALLPEADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDTSTHGGFSIL 151
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHA ECLPPLDM Q+TP QELVAKDLHG+EW FKHIFRGQPRRHLLTTGWSTFV+SKRL
Sbjct: 152 RKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWSTFVSSKRL 211
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD+FVFLR GE+ +G+R LARQ SSMP SVISSQSMHLGVLATASHAV TQTMFVV
Sbjct: 212 VTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAVTTQTMFVV 271
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
YYKPRTSQFII LNKYLEAV ++++VGMR+KM+FEGE+ PE+RF+GT+VGVED S WKD
Sbjct: 272 YYKPRTSQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKRFTGTIVGVEDSSSQWKD 331
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
SKWRSLKVQWDEPAS+ RPDRVSPW+IEPFVAS LV P+ KNKR R
Sbjct: 332 SKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRHR 381
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/582 (46%), Positives = 358/582 (61%), Gaps = 89/582 (15%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS G
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTS--G 137
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GF V +KHA ECLPPLDM+Q PTQEL+A DLHG +WRF H +RG P+RHLLTTGW+ F
Sbjct: 138 GFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 197
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS+IS +SM GV+A+A HA Q
Sbjct: 198 TSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQ 257
Query: 176 TMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
MF+V YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV D
Sbjct: 258 CMFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIGVSD 317
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
FSPHWK S+WR+L+VQWDE AS +RP++VSPWEIE + + N+ +P L KNKR R
Sbjct: 318 FSPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPAL--NVPRPSLLKNKRLREVN 375
Query: 294 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRT 353
E+ S++S L Q + QLSV + +S T
Sbjct: 376 EI-----GSSSSHLLPPILTQGQEIGQLSVASPMN---------------------ISLT 409
Query: 354 QSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK 413
D ++ ++ ++ + ++P P P N+ ++ Q+E
Sbjct: 410 YRDTT--------------EDVMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENIT 450
Query: 414 TETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
T+TGT+ RLFG+ L+ + P E++ G IS ++ E K+
Sbjct: 451 TKTGTNFRLFGVSLVTPSVIKDPIEEI--------GSEISKLT-------------EGKK 489
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
Q Q SP E QSKQ +S R+ TKVQMQGV + RA+DL+ L GYD LI ELEE+FD
Sbjct: 490 FGQSQTLRSPTEIQSKQ--FSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFD 547
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+KGQL TR +WEI +TD + D MLVGDDPW EFCNMVK+I I
Sbjct: 548 LKGQLQTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 589
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 350/580 (60%), Gaps = 85/580 (14%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS HG
Sbjct: 115 VENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTSAHG 165
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GF V +KHA ECLP LDM+Q P QEL+A DLHG +WRF H +RG P+RHLLTTGW+ F
Sbjct: 166 GFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 225
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 226 TSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQ 285
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF V YKPR+S+FI+S +K+L+AVNNKF VG R+ MR EG+D ERR GT++GV DFS
Sbjct: 286 CMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFS 345
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PHWK S+WRSL+VQWDE S P +VSPW+IE + + N+ + L KNKR R E+
Sbjct: 346 PHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKNKRLREVNEI 403
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
S++S L Q QLSV +S N R +
Sbjct: 404 -----GSSSSHLLPPILTQGQENEQLSV--------------------ASPMNISLRYRD 438
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
E +A++ +K + ++P P P N+ ++ ++E T+
Sbjct: 439 ATE---------------DAMNPSKLLMSYPVQ-----PMPKLNYNNQMVTEMEENITTK 478
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TGT+ RLFG+ L + P K P+ + +E IS ++ E K+
Sbjct: 479 TGTNFRLFGVTL-----DTPPVIKDPIEEIGSE---ISKLT-------------EGKKFG 517
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
Q SP E Q+KQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIK
Sbjct: 518 LSQTLRSPTEIQNKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK 575
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
GQL TR +WEI +TD + D MLVGDDPW EFCNMVK+IFI
Sbjct: 576 GQLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 615
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 268/580 (46%), Positives = 350/580 (60%), Gaps = 85/580 (14%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASDTS HG
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTSAHG 139
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GF V +KHA ECLP LDM+Q P QEL+A DLHG +WRF H +RG P+RHLLTTGW+ F
Sbjct: 140 GFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFT 199
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 200 TSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQ 259
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF V YKPR+S+FI+S +K+L+AVNNKF VG R+ MR EG+D ERR GT++GV DFS
Sbjct: 260 CMFTVVYKPRSSKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFS 319
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PHWK S+WRSL+VQWDE S P +VSPW+IE + + N+ + L KNKR R E+
Sbjct: 320 PHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAI--NVPRSFLLKNKRLREVNEI 377
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
S++S L Q QLSV +S N R +
Sbjct: 378 -----GSSSSHLLPPILTQGQENEQLSV--------------------ASPMNISLRYRD 412
Query: 356 DGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
E +A++ +K + ++P P P N+ ++ ++E T+
Sbjct: 413 ATE---------------DAMNPSKLLMSYPVQ-----PMPKLNYNNQMVTEMEENITTK 452
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
TGT+ RLFG+ L + P K P+ + +E IS ++ E K+
Sbjct: 453 TGTNFRLFGVTL-----DTPPVIKDPIEEIGSE---ISKLT-------------EGKKFG 491
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
Q SP E Q+KQ +S+R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FDIK
Sbjct: 492 LSQTLRSPTEIQNKQ--FSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIK 549
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
GQL TR +WEI +TD + D MLVGDDPW EFCNMVK+IFI
Sbjct: 550 GQLQTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 271/608 (44%), Positives = 356/608 (58%), Gaps = 103/608 (16%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E+ +DE YA+ITL+P +Q + + RP V+SF+KVLTASDTS HGGFSV R
Sbjct: 90 VEKNSDETYAEITLMPYTTQVVIHNQN---DNHYRPSVNSFTKVLTASDTSAHGGFSVPR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLPPL+M++ P QEL+ DL G +WRFKH +RG P RHL+TTGW+ F TSK+LV
Sbjct: 147 KHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNAFTTSKKLV 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD VFLRGE GEL VG+R QQ + PSS+IS SM GV+A+A HA Q MF+V
Sbjct: 207 AGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFDNQCMFIVV 266
Query: 182 YKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
KP R+SQFI+S +K+L+AVN KF VG R+ MRFEG+D ERR+SGT++GV+DFSPHW
Sbjct: 267 CKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSERRYSGTIIGVKDFSPHWI 326
Query: 240 DSKWRS-------------LKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+S+WRS L+V+WDE AS RPD+VSPWEIE + N+++ L KN
Sbjct: 327 ESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHL--TPLSNVLRSSLLKN 384
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 346
KR R E+ S++
Sbjct: 385 KRSREVNEIG-----------------------------------------------STS 397
Query: 347 SNFMSRTQSDGEWLTSPRVKFSQQL---FQEAIDDNKNISAWPAHSGHSTPHPSKP---- 399
S+ + + + + P + + + +++A +D + P+ S P P+ P
Sbjct: 398 SHLLPPISTQDQEIGQPSMIYPMNVLPSYRDATED----AEIPSRLLISYPVPTMPKLTY 453
Query: 400 NNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAA 458
NN+ ++ +E T SCRLFG+ L + PSE K P+
Sbjct: 454 NNNQMVTPLEKNITTNASASCRLFGVSL------ATPSEIKDPIDQ-------------- 493
Query: 459 ADSDGKSDIAKEFKEKK--QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 516
DS S+I+K +EKK Q S +E QSKQ L+S RS TKVQM+GV VGRALDL+
Sbjct: 494 QDSYQISEISKLSQEKKFGLGQTLTSAREIQSKQ--LSSTRSCTKVQMEGVTVGRALDLS 551
Query: 517 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
L GYD LI ELE++FD+ GQL TR +WEI + D+EGD M VGDDPW EFCNMVKRI I
Sbjct: 552 VLNGYDQLILELEKLFDLNGQLQTRNQWEISFIDNEGDKMFVGDDPWPEFCNMVKRIIIY 611
Query: 577 SSQDVKKM 584
+ + VK +
Sbjct: 612 TKEKVKNL 619
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/592 (47%), Positives = 360/592 (60%), Gaps = 89/592 (15%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E+ +DE YA+ITL+P P+QNE + RP V+SF+KVLTASDTS HG
Sbjct: 90 VERNSDETYAEITLMPYTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDTSAHG 140
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV RK A ECLPPLDM+Q P QEL+ DLHG +WRFKH +RG PRRHLLTTGW+ F+
Sbjct: 141 GFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFI 200
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LVAGD VFLRGE GEL VG+R QQ ++PSS+IS +SM GV+A+A HA Q
Sbjct: 201 TSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGVIASAKHAFDNQ 260
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF+V YKPR+SQFI++ +K+L+A+NNKF VG R+ RFE +D ERR+ GT++GV DFS
Sbjct: 261 CMFIVVYKPRSSQFIVNYDKFLDAMNNKFNVGSRFTKRFEEDDFSERRYFGTIIGVIDFS 320
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PHWK S+WRSLK DE AS RPD+VSPWEIE ++ + N+++ + KNK R E+
Sbjct: 321 PHWKCSEWRSLK---DEFASFPRPDKVSPWEIE--YSTPSSNVLRLSMLKNKCSREFNEI 375
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
S++S L Q + Q S
Sbjct: 376 -----GSSSSHLLPPILTQGQEIGQPS--------------------------------- 397
Query: 356 DGEWLTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT 414
+TSP V S +++AI+DN S T NND ++ + G T
Sbjct: 398 ----MTSPMNVPLS---YRDAIEDNSTPSRLLMSYSVQTMSRLNYNNDQMVTPIIEGNIT 450
Query: 415 ET-GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SCR+FG+ L ++ P K P+ + DS S+I+K +E
Sbjct: 451 NNGGASCRVFGVSL-----ATPPVIKDPIEQM--------------DSYPNSEISKLSQE 491
Query: 474 KKQEQVQV-SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
KK Q+ SP+E QSKQ L+S R+ TKVQM GVA+GRALDL+ L GYD LI ELE++F
Sbjct: 492 KKFGLGQMRSPREIQSKQ--LSSTRTCTKVQMHGVALGRALDLSVLNGYDQLILELEKLF 549
Query: 533 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D+KGQL R +WEI + D+E D MLVGDDPW EFCNMVK+I I S+++VK
Sbjct: 550 DLKGQLQNRNQWEIAFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVKNF 601
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 272/623 (43%), Positives = 362/623 (58%), Gaps = 118/623 (18%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E +DE+YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +GGFSV
Sbjct: 64 VENNSDEIYAEITLMPDTTQVVIPTQSE----NRFRPLVNSFTKVLTASDTSAYGGFSVP 119
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+KHA ECLPPLDM+Q P QE++A DLH +WRF+H +RG P+RH LTTGW+ F+TSK+L
Sbjct: 120 KKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKL 179
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q +F+V
Sbjct: 180 VKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIV 239
Query: 181 YYKP----------RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
YKP R+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++G
Sbjct: 240 VYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYFGTIIG 299
Query: 231 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
V DFSPHWK S+WRSL+VQWDE AS +RP++VSPWEIE V + N+ + L KNKR R
Sbjct: 300 VSDFSPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPAL--NVPRSSLLKNKRLR 357
Query: 291 LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFM 350
EV + S++S L Q + QLSV +S N
Sbjct: 358 ---EVN--EFGSSSSHLLPPILTQGQEIGQLSV--------------------ASPMNIS 392
Query: 351 SRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVET 410
R + E A++ ++ + ++P P P N+ ++ Q+E
Sbjct: 393 LRYRDTTE---------------AAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEE 432
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
T+ GT+ RLFG+ L + P K P+ + SDI+K
Sbjct: 433 NITTKAGTNFRLFGVTL-----DTPPMIKDPIKQI------------------GSDISKL 469
Query: 471 FKEKK--QEQVQVSPKESQSKQSCLTSNRSRTK--------------------------- 501
+ KK Q Q SP E QSKQ +S+R+ TK
Sbjct: 470 TERKKFGQSQTLRSPIEIQSKQ--FSSSRTCTKVSIRSIYSYSLYMKLFLIVLNSHNLYM 527
Query: 502 --VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
VQMQGV +GRA+DL+ L GYD LI ELE++FDIKGQL TR +W+I +TD +G MLVG
Sbjct: 528 EQVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVG 587
Query: 560 DDPWHEFCNMVKRIFICSSQDVK 582
DDPW EFC MVK+I I S ++VK
Sbjct: 588 DDPWPEFCKMVKKILIYSKEEVK 610
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/588 (43%), Positives = 351/588 (59%), Gaps = 82/588 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E +DE YA+ITL+P+ +Q T + + RP V+SF+KVLTASDTS HGGFSV +
Sbjct: 145 VENNSDETYAEITLMPDTTQVVIPTQN---QNQFRPLVNSFTKVLTASDTSVHGGFSVPK 201
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLPPLDM+Q PTQE++A DLHG +WRF+HI+RG +RHLLT GW+ F TSK+LV
Sbjct: 202 KHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLV 261
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
GD VF+RGE GEL VG+R QQ ++PSS++S +SM G++A+A HA Q MF+V
Sbjct: 262 EGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVV 321
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR+SQFI+S +K+L+ VNNKF VG R+ MRFEG+D ERR GT++GV DFSPHWK S
Sbjct: 322 YKPRSSQFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSPHWKCS 381
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKRPRLSMEVPPLD 299
+WRSL+VQWDE AS RP++VSPW+IE TP N+ + KNKR R E+
Sbjct: 382 EWRSLEVQWDEFASFPRPNQVSPWDIEHL----TPWSNVSRSSFLKNKRSREVNEI---- 433
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
S++S L Q + Q S+ ++ N R +
Sbjct: 434 -GSSSSHLLPPTLTQGQEIGQQSM--------------------ATPMNISLRYRD---- 468
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
+ ++A+ ++ + ++P +K N + ++ +E T S
Sbjct: 469 -----------ITEDAMTPSRLLMSYPVQPM------AKLNYNNVVTPIEENITTNAVAS 511
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK--QE 477
RLFG+ L + P E++ + +I++ +EKK Q
Sbjct: 512 FRLFGVSLATPSVIKDPVEQIGL-----------------------EISRLTQEKKFGQS 548
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
Q+ SP E QSKQ +S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KGQ
Sbjct: 549 QILRSPTEIQSKQ--FSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQ 606
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R +WEI +T++E D MLVG+DPW EFCNM + S D K++
Sbjct: 607 LQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMRGYVASNSKDDPAKVA 654
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/586 (44%), Positives = 349/586 (59%), Gaps = 99/586 (16%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E +DE YA+ITL+P+ +Q PT + + RP V+SF+KVLTASDTS +GGF V
Sbjct: 89 VENNSDETYAEITLMPDTTQVVIPTQSE----NQFRPLVNSFTKVLTASDTSAYGGFFVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+KHA ECLPPL + P QEL+AKDLHG +WRF+H +RG P+RH LTTGW+ F TSK+L
Sbjct: 145 KKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKL 200
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA+ Q +F+V
Sbjct: 201 VKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIV 260
Query: 181 YYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHW 238
YKP R+SQFI+S +K+L+A+NNKF VG R+ MRFEG+D ERR+ GT++GV DFSPHW
Sbjct: 261 VYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYFGTIIGVNDFSPHW 320
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
K S+WRSL+VQWDE AS +RP++VSPWEIE +++ N+ + L KNKR R E
Sbjct: 321 KCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSAL--NVPRSSLLKNKRLREVNEF--- 375
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGE 358
+ QLSV + N++ R +
Sbjct: 376 ----------------GQEIGQLSVAS------------------PMNTSLRYRDTT--- 398
Query: 359 WLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
++A++ ++ + ++P P P N+ ++ Q+E T+ T
Sbjct: 399 --------------EDAMNPSRLLMSYPVQ-----PMPKLNYNNQMVTQIEENITTKAVT 439
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQ 476
+ RLFG+ L P E++ SDI+K E K+ Q
Sbjct: 440 NFRLFGVSLAIPLVIKDPIEEI-----------------------GSDISKLTEGKKFGQ 476
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
Q SP E QSKQ S R+ TKVQMQGV +GRA+DL+ L GYD LI ELE++FD+KG
Sbjct: 477 SQTLRSPIEIQSKQ--FGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKG 534
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
QL TR +W+I +TD +G MLVGDDPW EFC MVK+I I S ++VK
Sbjct: 535 QLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/592 (42%), Positives = 345/592 (58%), Gaps = 80/592 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG + +
Sbjct: 87 VDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPK 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKR 119
++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F T+KR
Sbjct: 144 QYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKR 203
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T+ MF
Sbjct: 204 LIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFN 263
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D SPHWK
Sbjct: 264 VVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWK 323
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
DS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 324 DSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH----------- 370
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
W + ++ SN + +
Sbjct: 371 ------------------------------------WLQLNEIGATLSNLWTCQEIGQRS 394
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
+ SP + + + AI+D+K +S HS + P+ + N+D +++ + TE T
Sbjct: 395 MNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATT 452
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
SC LFG++L S + P+ S + D K D Q Q
Sbjct: 453 SCLLFGVDLTK--VSKSKDSICPIESC----------KKSLPQDKKFD---------QTQ 491
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
SPKE QS + T RSR KV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L
Sbjct: 492 PLRSPKEVQSTEFNFT--RSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL 549
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
TR +WEIV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 550 RTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 601
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/295 (73%), Positives = 246/295 (83%), Gaps = 2/295 (0%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASDTSTHGGFSVLR
Sbjct: 84 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 144 KHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+
Sbjct: 204 AGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+SPER F+GT++G D S W S
Sbjct: 264 YKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPAS 323
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 295
KWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K+KR R E+
Sbjct: 324 KWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 377
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 473
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/295 (73%), Positives = 246/295 (83%), Gaps = 2/295 (0%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASDTSTHGGFSVLR
Sbjct: 105 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLR 164
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 165 KHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 224
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+
Sbjct: 225 AGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVF 284
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+SPER F+GT++G D S W S
Sbjct: 285 YKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPAS 344
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 295
KWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K+KR R E+
Sbjct: 345 KWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 398
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 454 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 494
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 495 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 550
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 604
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/295 (73%), Positives = 246/295 (83%), Gaps = 2/295 (0%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + +P V SF K+LTASDTSTHGGFSVLR
Sbjct: 84 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKPAVDSFVKILTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q TPTQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 144 KHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGE G+L VGVR LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+
Sbjct: 204 AGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFIIS+NKY+ A+ N F++GMRY+MRFEGE+SPER F+GT++G D S W S
Sbjct: 264 YKPRISQFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPAS 323
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 295
KWRSL++QWDEP+SI RP++VSPWEIEPF SA TP Q +K+KR R E+
Sbjct: 324 KWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 377
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 106/174 (60%), Gaps = 24/174 (13%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K
Sbjct: 433 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------HD 473
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 474 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 529
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S L
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKSLL 583
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 200/273 (73%), Positives = 235/273 (86%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTSTHGGFSVLR
Sbjct: 87 AEHDTDEVYAQITLKPEEDQSEPTSLDPPIVEPTKQMFHSFVKILTASDTSTHGGFSVLR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q+ PTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLV
Sbjct: 147 KHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLV 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGENG+L VGVR LAR Q++MP+SVISSQSMHLGVLATASHAV TQTMF+V+
Sbjct: 207 AGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVNTQTMFLVF 266
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFI+S+NKY+EA+ + F++G R++MRFEGE+SPER F+GT+VG+ D S W S
Sbjct: 267 YKPRISQFIVSVNKYMEAMKHGFSLGTRFRMRFEGEESPERIFTGTIVGIGDLSSQWPAS 326
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
WRSL+VQWDEP ++ RPD+VSPWEIEPF+ S+
Sbjct: 327 TWRSLQVQWDEPTTVQRPDKVSPWEIEPFLPSS 359
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 102/174 (58%), Gaps = 29/174 (16%)
Query: 408 VETGRKTETGTSC-RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 466
V+ +SC RLFG +L ++ + P +K P+ + S AA
Sbjct: 393 VQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDT-----------SEAA------- 434
Query: 467 IAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 526
K Q+ + S KQ ++R+RTKVQMQG+AVGRA+DLT L YD LI
Sbjct: 435 -------KCQDPITPSSVNEPKKQQ---TSRTRTKVQMQGIAVGRAVDLTLLKSYDELIK 484
Query: 527 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
ELEEMF+I+GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +
Sbjct: 485 ELEEMFEIQGQLLPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 538
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/302 (68%), Positives = 242/302 (80%), Gaps = 14/302 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + + HSF K+LTASDTSTHGGFSVLR
Sbjct: 88 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPTKQMFHSFVKILTASDTSTHGGFSVLR 147
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLV
Sbjct: 148 KHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLV 207
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV T T+FVV+
Sbjct: 208 AGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVRTTTIFVVF 267
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER-----------RFSGTVVG 230
YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER RF+GT+VG
Sbjct: 268 YKPRISQFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWSVFRFTGTIVG 327
Query: 231 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS---ATPNLVQPVLAKNK 287
D S W SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A+ +TP + K
Sbjct: 328 TGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQLKCKRS 387
Query: 288 RP 289
RP
Sbjct: 388 RP 389
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 111/181 (61%), Gaps = 29/181 (16%)
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
S RLFG +L ++ + P +K P + T AA K QE
Sbjct: 453 SYRLFGFDLTSNPPAPLPQDKQP----------MDTCGAA---------------KCQEP 487
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
+ + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LI+ELEEMF+I+GQL
Sbjct: 488 ITPTSMNEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQL 544
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+ S+E E
Sbjct: 545 RPRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMATKLKISS-SLENE 603
Query: 599 D 599
+
Sbjct: 604 E 604
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/290 (72%), Positives = 240/290 (82%), Gaps = 2/290 (0%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITL PE Q+EPT+ DP + + V SF K+LTASDTSTHGGFSVLR
Sbjct: 84 AEHETDEVYAQITLQPEEDQSEPTSLDPPLVEPAKQSVDSFVKILTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q T TQELVA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV
Sbjct: 144 KHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRG+ G+L VGVR LARQQS+MP+SVISSQSMHLGVLATASHAV T+T+FVV+
Sbjct: 204 AGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQSMHLGVLATASHAVNTKTLFVVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFII +NKY+ A+ F +GMR++MRFEGE+SPER F+GT+VG D S W S
Sbjct: 264 YKPRISQFIIGVNKYMAAMKIGFPIGMRFRMRFEGEESPERIFTGTIVGTGDLSSQWPAS 323
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASA-TPNLVQPVLAKNKRPR 290
KWRSL++QWDEP+++ RP++VS WEIEPF S TP QP +K+KR R
Sbjct: 324 KWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPSVLTPTPTQP-QSKSKRSR 372
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 27/149 (18%)
Query: 412 RKTET--GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK 469
+KTET + CRLFG +L++ S+AP VP L +IS S + S K
Sbjct: 436 KKTETPVTSCCRLFGFDLMSKPASTAP---VPPDKL-----LISVDSNNSGS-AKCQDPN 486
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
E+KQ+ TS RSRTKVQ QG AVGRA+DLT L YD LI+ELE
Sbjct: 487 SLTEQKQQ----------------TSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530
Query: 530 EMFDIKGQLHTRTKWEIVYTDDEGDMMLV 558
+MF+I G+L + KW IV+TDDEGDMMLV
Sbjct: 531 KMFEIDGELSPKDKWAIVFTDDEGDMMLV 559
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/272 (73%), Positives = 233/272 (85%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITL PE Q+E T+ DP + + HSF K+LTASDTSTHGGFSVLR
Sbjct: 87 AEHDTDEVYAQITLKPEEDQSELTSLDPPLVEPTKQMFHSFVKILTASDTSTHGGFSVLR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHATECLP LDM Q+TPTQELV +DLHG+EWRFKHIFRGQPRRHLLTTGWSTFV+SKRLV
Sbjct: 147 KHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLV 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD FVFLRGENG+L VGVR LAR QS+MP+SVISSQSMHLGVLATASHAV T+T+F+V+
Sbjct: 207 AGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVVTKTIFLVF 266
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR SQFI+ +NKY+EA+ + F++G R++MRFEGE+SPER F+GT+VG+ D S W S
Sbjct: 267 YKPRISQFIVGVNKYMEAMKHGFSLGTRFRMRFEGEESPERMFTGTIVGIGDLSSQWPAS 326
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
WRSL+VQWDEP + RPDRVSPWEIEPF++S
Sbjct: 327 TWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSS 358
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
+K QE + S KQ R+RTKV MQGVAVGRA+DLT L Y+ LI ELEEMF
Sbjct: 430 DKCQEPITPSAANEPKKQQ---KQRTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMF 486
Query: 533 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+IKGQL TR KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+
Sbjct: 487 EIKGQLLTREKWVVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMT 539
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 246/308 (79%), Gaps = 12/308 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP Q + P PA SPRP V SF K LTASDTSTHGGFSV
Sbjct: 86 AETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 146 LRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 206 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEV 295
W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR V
Sbjct: 326 WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNV 379
Query: 296 PPLDLPSA 303
PP L S+
Sbjct: 380 PPPSLESS 387
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 462
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 463 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 773
Query: 580 DVKKMSPGSKLP 591
+V+KM+ S P
Sbjct: 774 EVQKMNSKSAAP 785
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 246/308 (79%), Gaps = 12/308 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP Q + P PA SPRP V SF K LTASDTSTHGGFSV
Sbjct: 80 AETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSV 139
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 140 LRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 199
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 200 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 259
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 260 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 319
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEV 295
W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR V
Sbjct: 320 WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNV 373
Query: 296 PPLDLPSA 303
PP L S+
Sbjct: 374 PPPSLESS 381
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 462
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 594 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 649
Query: 463 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 650 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 707
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 708 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 767
Query: 580 DVKKMSPGSKLP 591
+V+KM+ S P
Sbjct: 768 EVQKMNSKSAAP 779
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/308 (67%), Positives = 246/308 (79%), Gaps = 12/308 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP Q + P PA SPRP V SF K LTASDTSTHGGFSV
Sbjct: 86 AETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 146 LRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 206 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEV 295
W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR V
Sbjct: 326 WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR--QNV 379
Query: 296 PPLDLPSA 303
PP L S+
Sbjct: 380 PPPSLESS 387
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 19/164 (11%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 462
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 600 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 655
Query: 463 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 656 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 563
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPW 757
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/309 (66%), Positives = 247/309 (79%), Gaps = 9/309 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQITLLPE Q+EPT+PD + + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQITLLPELDQSEPTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLH EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGEN EL VGVR RQQ+++PSSVISS SMH+GVLATA+HA+ T T+F V+
Sbjct: 204 AGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAITTGTIFSVF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV-EDFSPHW 238
YKPRT S+FI+S+N+YLEA K +VGMR+KMRFEGE++PE+RFSGT+VGV E+ S W
Sbjct: 264 YKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKRFSGTIVGVQENKSSVW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 324 HDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------PP 377
Query: 299 DLPSAASAP 307
LPS A+ P
Sbjct: 378 GLPSPATGP 386
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 13/188 (6%)
Query: 410 TGRKTETGTSCRLFGIELINHA------TSSAPSEKVPVSSLTTEGHIISTISAAADSDG 463
T +K G CRLFG EL+ + ++++ S V V S + +
Sbjct: 455 TEKKQTNGNVCRLFGFELVENVNVDECFSAASVSGAVAVDQPVPSNEFDSGQQSEPLNIN 514
Query: 464 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 523
+SDI + ++ ++ SP+ESQS+Q RS TKV MQG AVGRA+DLT Y+
Sbjct: 515 QSDIPSGSGDPEKSSLR-SPQESQSRQI-----RSCTKVHMQGSAVGRAIDLTRSECYED 568
Query: 524 LIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
L +LEEMFDIKG+L TK W++VYTDDE DMM+VGDDPW+EFC MV++IFI + ++VK
Sbjct: 569 LFKKLEEMFDIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVK 628
Query: 583 KMSPGSKL 590
K+SP +KL
Sbjct: 629 KLSPKNKL 636
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/292 (69%), Positives = 242/292 (82%), Gaps = 4/292 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QEL+A DLHG EW F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRG NG+L VGVR L RQQ++MPSSVISS SMHLGVLATAS+A++T++MF ++
Sbjct: 204 AGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALSTRSMFSIF 263
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE-DFSPHW 238
YKPRT S+FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VGVE D S W
Sbjct: 264 YKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEADKSSGW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR R
Sbjct: 324 ADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 126/189 (66%), Gaps = 16/189 (8%)
Query: 412 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 470
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD +
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPSNL 518
Query: 471 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 524
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 525 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 583
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++IFI +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRK 633
Query: 584 MSPGSKLPM 592
+SP KLP+
Sbjct: 634 LSPKIKLPV 642
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/296 (68%), Positives = 242/296 (81%), Gaps = 12/296 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K LTASDTSTHGGF
Sbjct: 81 AEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGF 139
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 140 SVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSS 199
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++M
Sbjct: 200 KRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSM 259
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+GT++G E+
Sbjct: 260 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLD 319
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 320 PVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPR 371
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 664 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 722
Query: 533 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 723 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 782
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/296 (68%), Positives = 242/296 (81%), Gaps = 12/296 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K LTASDTSTHGGF
Sbjct: 69 AEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGF 127
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 128 SVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSS 187
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++M
Sbjct: 188 KRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSM 247
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+GT++G E+
Sbjct: 248 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLD 307
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 308 PVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPR 359
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 652 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 710
Query: 533 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 711 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 770
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/274 (72%), Positives = 229/274 (83%), Gaps = 2/274 (0%)
Query: 23 EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQEL 82
EPT+ DP + +P V SF K+LTASDTSTHGGFSVLRKHATECLP LDM Q TPTQEL
Sbjct: 18 EPTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQEL 77
Query: 83 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 142
VA+DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGD FVFLRGE G+L VGVR
Sbjct: 78 VARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRR 137
Query: 143 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNN 202
LA+QQS+MP+SVISSQSM LGVLATASHAV T T+FVV+YKPR SQFIIS+NKY+ A+ N
Sbjct: 138 LAKQQSTMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQFIISVNKYMMAMKN 197
Query: 203 KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRV 262
F++GMRY+MRFEGE+SPER F+GT++G D S W SKWRSL++QWDEP+SI RP++V
Sbjct: 198 GFSLGMRYRMRFEGEESPERIFTGTIIGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKV 257
Query: 263 SPWEIEPFVASA-TPNLVQPVLAKNKRPRLSMEV 295
SPWEIEPF SA TP Q +K+KR R E+
Sbjct: 258 SPWEIEPFSPSALTPTPTQQ-QSKSKRSRPISEI 290
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 113/189 (59%), Gaps = 27/189 (14%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 346 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 386
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 387 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 442
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 596
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI S +VKKM S + +
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSKS---LLGDK 499
Query: 597 GEDILLSSD 605
G + L SD
Sbjct: 500 GTIVNLESD 508
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/296 (68%), Positives = 242/296 (81%), Gaps = 12/296 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP V SF K LTASDTSTHGGF
Sbjct: 86 AEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPVRSFCKTLTASDTSTHGGF 144
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 145 SVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSS 204
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++M
Sbjct: 205 KRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSM 264
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+GT++G E+
Sbjct: 265 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLD 324
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 325 PVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPR 376
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 669 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 727
Query: 533 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 728 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 787
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 262/610 (42%), Positives = 340/610 (55%), Gaps = 97/610 (15%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDE+YAQITL PEP Q + P P+P ++ RP VHSF K+LT SDTSTHGGFSVL
Sbjct: 71 AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSDTSTHGGFSVL 130
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM+ TPTQEL+ KDLHG EWRFKHI+RGQPRRHLLTTGWSTFVTSK+L
Sbjct: 131 RRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKL 190
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD F V
Sbjct: 191 IAGDAF-----------------------------------------------------V 197
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKD 240
Y + SQ+I+ LNKYLE+ F VGMR+KM FEG+D P ++FSGTVV D SP W+
Sbjct: 198 YLRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIKKFSGTVVDKGDLSPQWQG 257
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLSMEVPPL 298
S+W++LKV+WDE ++ P+RVS WEIEPF ASA P + PV KNKRPR + E +
Sbjct: 258 SEWKTLKVKWDEATNLNGPERVSSWEIEPFDASA-PAITMPVQPSMKNKRPRETAEGLDI 316
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-DG 357
A W + + H T +S ++E K + VAW + + +S+ S+ + + + G
Sbjct: 317 HALEPAQEFWLSGRPEQHEKTSVS-SSEPK---HQVAWTSERAGYSAMSSSICQNSAVTG 372
Query: 358 EWL-------TSPRV-KFSQQLFQEAIDDNKNISAWPAHSGHSTPHP-SKPNNDTLLEQV 408
W + P + + SQ+LFQ +D + + WP S + P SK + +T L
Sbjct: 373 SWFKGFNSSGSHPSLPEISQKLFQVTSNDAR-VPPWPGLSAYHADEPSSKLSCNTALCSY 431
Query: 409 ET------------GRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTIS 456
+T K E G RLFG+ LINHA SSA ++K V + T +
Sbjct: 432 QTEEVAPRFSNAVEEEKKEPGM-FRLFGVNLINHARSSATADKTSVGAGETSARAAGSFE 490
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 516
DS S + K+ V SP+E QS QSC S RSR KVQM G V RA+DL
Sbjct: 491 ---DSAQLSRVTKDHT----HMVNGSPREIQSHQSC--SGRSRIKVQMHGNDVCRAVDLG 541
Query: 517 TLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 574
L GY+ L+ E+ EMF+IK L ++ K W++ + +DE + M VG PW EFC MV++I
Sbjct: 542 NLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIV 600
Query: 575 ICSSQDVKKM 584
I S D M
Sbjct: 601 IHSIGDRGHM 610
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 240/300 (80%), Gaps = 9/300 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP QN+ A PRP V SF K LTASDTSTHGGFSV
Sbjct: 85 AETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 145 LRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 205 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 265 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 296
W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 325 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 472 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 776
Query: 581 VKKMSPGSKLP 591
V+KM+ S +P
Sbjct: 777 VQKMNSKSSVP 787
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/299 (66%), Positives = 238/299 (79%), Gaps = 6/299 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP Q + A SPRP V SF K LTASDTSTHGGFSV
Sbjct: 86 AETDTDEVYAQIMLMPEPEQTDVAAEKASSASAASPRPAVRSFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 146 LRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 206 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P P+ ++ KRPR + P
Sbjct: 326 WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPPVNPLPLSSRVKRPRQNAPPP 382
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 240/300 (80%), Gaps = 9/300 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP QN+ A PRP V SF K LTASDTSTHGGFSV
Sbjct: 80 AETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSV 139
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 140 LRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 199
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 200 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 259
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 260 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 319
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 296
W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 320 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 375
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 118/191 (61%), Gaps = 17/191 (8%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 597 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 652
Query: 472 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 653 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 711
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+I + ++
Sbjct: 712 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRKIYIYTKEE 771
Query: 581 VKKMSPGSKLP 591
V+KM+ S +P
Sbjct: 772 VQKMNSKSSVP 782
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 240/300 (80%), Gaps = 9/300 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP QN+ A PRP V SF K LTASDTSTHGGFSV
Sbjct: 85 AETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 145 LRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 205 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 265 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 296
W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 325 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 118/197 (59%), Gaps = 23/197 (11%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSDGKSDIAKEF 471
KT G+ ++FG ++ T+ +P + P+S++ H++ T +A ++ + +
Sbjct: 602 KTREGSGFKIFGFQV--DTTNPSPVQLSSPLSAIRE--HVVQTRPSAPVNELQPVQIECL 657
Query: 472 KE----------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
E + +QVQ S K+ QSK S S RS TKV QGVA+GR++DL+ Y
Sbjct: 658 PEVSVSTAGTAAENIQQVQQSSKDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTDY 716
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW------HEFCNMVKRIF 574
L EL++MF+ +G+L + + W+IVYTD+EGDMMLVGDDPW EFCN+V++I+
Sbjct: 717 GELKAELDKMFEFEGELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCNIVRKIY 776
Query: 575 ICSSQDVKKMSPGSKLP 591
I + ++V+KM+ S +P
Sbjct: 777 IYTKEEVQKMNSKSSVP 793
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/295 (68%), Positives = 234/295 (79%), Gaps = 8/295 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNE T+ D P + + HSF K LTASDTSTHGGFSVLR
Sbjct: 85 AEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFCKTLTASDTSTHGGFSVLR 144
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLV
Sbjct: 145 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLV 204
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 205 SGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAISTGTLFSVF 264
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-- 237
YKPRTS+ FI+S+NKYLEA K +VGMR+KMRFEG+D+PERRFSGT++G+
Sbjct: 265 YKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDAPERRFSGTIIGIGSLPAMSK 324
Query: 238 --WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A A P QP L + KRPR
Sbjct: 325 SLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDA-ANPQSPQPPL-RAKRPR 377
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 240/300 (80%), Gaps = 9/300 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEVYAQI L+PEP QN+ A PRP V SF K LTASDTSTHGGFSV
Sbjct: 85 AETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
LR+HA ECLP LDM+QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKR
Sbjct: 145 LRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T++MF
Sbjct: 205 LVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ P
Sbjct: 265 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP 296
W DS WR LKV+WDEP++I RPD+VSPW+IEP AS+ P V P+ L++ KRPR + P
Sbjct: 325 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP--ASSPP--VNPLPLSRGKRPRQNAPPP 380
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/301 (66%), Positives = 239/301 (79%), Gaps = 16/301 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNE------PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TL+PEP+Q+E P P P PR VHSF K LTASDTSTHG
Sbjct: 105 AEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPP-----PRFHVHSFCKTLTASDTSTHG 159
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 160 GFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFV 219
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
+SKRLVAGD F+FLRGENGEL VGVR RQQ + PSSVISS SMHLGVLATA HA+ T+
Sbjct: 220 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTK 279
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +FI+ + Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 280 TMFTVYYKPRTSPAEFIVPYDHYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIED 339
Query: 234 FSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P W +SKWR LKV+WDE +SI RPDRVSPW+IEP A + P L P +A+ KRPR S
Sbjct: 340 ADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEP--ALSPPALNVPPVARPKRPRSS 397
Query: 293 M 293
+
Sbjct: 398 I 398
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 28/234 (11%)
Query: 382 ISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKV- 440
+S + S HS KP ++++Q E + E + +LFGI L ++ + A +
Sbjct: 598 VSPYMQLSSHSREMMHKP---SVVKQPEAVKPKEG--NYKLFGIPLTSNVCTDAVMMRKS 652
Query: 441 ----PVSSLTTEGHIISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKES 486
P S + H ++ A DSD +S+ +K K +K+ ++ ++
Sbjct: 653 SLIDPASDMNIGIHPHQSL--ATDSDQRSEQSKGSKVDDGVAANDHDKQFHTFHLAARDK 710
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WE 545
K +S RS TKV QG A+GR++DL YD LI EL+++FD G+L R+K W
Sbjct: 711 DGKGHS-SSTRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKSWL 769
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 599
+VYTDDEGDMMLVGDDPW EFC MV++IFI + ++V++M+PG+ + +GED
Sbjct: 770 VVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMNPGT----LNSKGED 819
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTSTHGGF
Sbjct: 123 AEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGF 179
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TM
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 581 VKKMSPGS 588
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTSTHGGF
Sbjct: 123 AEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGF 179
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TM
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 581 VKKMSPGS 588
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTSTHGGF
Sbjct: 123 AEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGF 179
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TM
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 581 VKKMSPGS 588
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/303 (66%), Positives = 243/303 (80%), Gaps = 12/303 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
AE +TDEVYAQ+ L+PEP QNE + A PRP V SF K LTASDTSTHGGFS
Sbjct: 83 AEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVRSFCKTLTASDTSTHGGFS 142
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
VLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRHLL +GWS FV+SK
Sbjct: 143 VLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSK 202
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVLATA HA+ T++MF
Sbjct: 203 RLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMF 262
Query: 179 VVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
VYYKPRT S+FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+
Sbjct: 263 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQ 322
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEV 295
W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR + V
Sbjct: 323 LWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--V 376
Query: 296 PPL 298
PP+
Sbjct: 377 PPV 379
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 469
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 588 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 644
Query: 470 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 645 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 703
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 704 YDELTAELDRMFEFDGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 763
Query: 580 DVKKMSPGSKLP 591
+V+KM+ S P
Sbjct: 764 EVQKMNSKSSTP 775
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTSTHGGF
Sbjct: 123 AEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGF 179
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TM
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 643 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 700
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 701 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 757
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 758 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 817
Query: 581 VKKMSPGS 588
V+KM+PG+
Sbjct: 818 VRKMNPGT 825
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/294 (68%), Positives = 239/294 (81%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 123 AEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 182
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 183 RRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 242
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TMF V
Sbjct: 243 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTV 302
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 303 YYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTR 362
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRPR
Sbjct: 363 WAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRPR 413
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 104/176 (59%), Gaps = 9/176 (5%)
Query: 419 SCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
+CRLFGI L+N+ + A S ++L + T A SD +K K ++
Sbjct: 648 NCRLFGIPLVNN-MNGADSTMAQRNNLKDAAGLTQT--APPKVQDLSDQSKGSKSTNDQR 704
Query: 479 VQVSPKES-----QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
Q P ++ + + S+RS TKV QG+A+GR++DL+ Y+ LI EL+ +F+
Sbjct: 705 EQGRPFQTNHPHPKDAHTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFE 764
Query: 534 IKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
G+L K W IVYTDDE DMM VGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 765 FNGELMAPKKDWLIVYTDDENDMMRVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 820
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/295 (67%), Positives = 238/295 (80%), Gaps = 8/295 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+EPT+PD P + R V+SF K LTASDTSTHGGFSVLR
Sbjct: 82 AETDSDEVYAQIMLQPEADQSEPTSPDSEPPEPERCNVYSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM Q+ P QEL+AKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS +MHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-- 237
YKPRT S+F++S+NKYLEA N+K +VGMR+KMRFEG++SPERR SGT++G+ +
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTIIGLGSMPANST 321
Query: 238 --WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
W +S WRSL+VQWDEP++I RPDRVSPWE+EP A+ P QP L +NKR R
Sbjct: 322 SPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDAT-NPQPPQPHL-RNKRAR 374
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----TPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEVYAQITLLPE +Q+E P P P PR +VHSF K LTASDTSTHGGF
Sbjct: 123 AEADTDEVYAQITLLPEANQDENAIEKEAPLPPP---PRFQVHSFCKTLTASDTSTHGGF 179
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+S
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TM
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F VYYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+E+
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEESD 359
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 360 PTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKRPR 413
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/278 (69%), Positives = 225/278 (80%), Gaps = 6/278 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNE T+ DP P + + HSF K LTASDTSTHGGFSVLR
Sbjct: 89 AEADSDEVYAQIMLQPEADQNELTSLDPEPQEPEKCTAHSFCKTLTASDTSTHGGFSVLR 148
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+ + P QELVAKDLHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLV
Sbjct: 149 RHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLV 208
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 209 AGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAISTGTLFSVF 268
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-- 237
YKPRTS+ FI+S+NKYLEA K +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 269 YKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDEAPERRFSGTIIGIGSLPAMSK 328
Query: 238 --WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
W DS WRSLKVQWDEP+SI RPDR+SPWE+EP A+
Sbjct: 329 SLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAA 366
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 239/297 (80%), Gaps = 8/297 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEVYAQITLLPEP Q+E + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 119 AEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 178
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 179 RRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 238
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TMF V
Sbjct: 239 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTV 298
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 299 YYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTR 358
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRPR ++
Sbjct: 359 WAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPAL---SPPALSPVPMPRPKRPRSNL 412
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 11/177 (6%)
Query: 419 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 475
+CRLFGI L+N+ T + S++ ++ T I S + +D S + +E+
Sbjct: 645 NCRLFGIPLVNNVNGTDTTLSQRNNLNDCTGPTQIASPKVQDLSDQSKGSKSTNDHREQG 704
Query: 476 QE--QVQVSPKESQSK-QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
+ + PK+ Q+K SC RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F
Sbjct: 705 RPFPVNKPHPKDVQTKTNSC----RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLF 760
Query: 533 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 EFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 817
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/309 (65%), Positives = 240/309 (77%), Gaps = 16/309 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE Q+E T+ DP D + HSF K LTASDTSTHGGFSVLR
Sbjct: 82 AEADSDEVYAQIMLQPEADQSELTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLR 141
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQPRRHLLTTGWS FV+SKRLV
Sbjct: 142 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLV 201
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE+GEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 202 AGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 261
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF----- 234
YKPRT S+F++S+NKYLEA +VGMR+KMRFEG+++PERRFSGT++G+
Sbjct: 262 YKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSK 321
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR------ 288
SP W DS W+SLKVQWDEP++I RPDRVSPWE+EP AS P QP L +NKR
Sbjct: 322 SP-WADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDAS-NPQPPQPPL-RNKRARPPAS 378
Query: 289 PRLSMEVPP 297
P + E+PP
Sbjct: 379 PSVVAELPP 387
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-T 540
SP ESQS+Q RS TKV MQG+AVGRA+DLT L GY L +LEEMFDI+G L T
Sbjct: 415 SPLESQSRQV-----RSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPT 469
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEF 566
+W++VYTDDE DMMLVGDDPW +F
Sbjct: 470 LKRWQVVYTDDEDDMMLVGDDPWEKF 495
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/296 (67%), Positives = 241/296 (81%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLP +Q+E + +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 115 AEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 174
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 175 RRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 234
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQS++PSSVISS SMHLGVLATA HAV+T TMF V
Sbjct: 235 VAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVSTGTMFTV 294
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E+V + +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 295 YYKPRTSPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPSR 354
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
WKDSKWR LKV+WDE ++I RPDRVSPW+IEP A A P L + + KRPR +M
Sbjct: 355 WKDSKWRCLKVRWDETSTIPRPDRVSPWKIEP--ALAPPALNPLPMPRPKRPRANM 408
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 125/228 (54%), Gaps = 25/228 (10%)
Query: 387 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 446
AH+ P P L+++ TG+ + +C+LFGI L + A E+ +++
Sbjct: 619 AHTRELIPKPK------LVQEHNTGKSLDG--NCKLFGIPL--KISKPATPEQAGPTNMV 668
Query: 447 TE--GHII-STISAAADSDGKSD------IAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 497
E GH ++ ++SD KS+ +A E + +K QV ++ +S R
Sbjct: 669 NEPMGHTQPASHQLTSESDQKSEHSRGSKLADENENEKPLQVGHMRMRDSHGKAQNSSTR 728
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMM 556
S TKV QG+A+GR++DLT YD LI EL+ +F+ G+L K W IVYTDDE DMM
Sbjct: 729 SCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKNWLIVYTDDEDDMM 788
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS-----IEGED 599
LVGDDPW EF MV++I I + ++V+++ PG+ + +EGED
Sbjct: 789 LVGDDPWQEFVGMVRKIVIYTREEVQRIKPGTLNSRVNENPSGVEGED 836
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 241/297 (81%), Gaps = 8/297 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 122 AEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 181
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 182 RRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 241
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T TMF V
Sbjct: 242 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTV 301
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 302 YYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKR 361
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRPR +M
Sbjct: 362 WRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRPRSNM 415
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 387 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 446
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 447 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 494
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEG 553
S RS TKV QG+A+GR++DLT YD LI EL+++F+ G+L K W IVYTDDEG
Sbjct: 734 STRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEG 793
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
DMMLVGDDPW EFC MV++I+I + ++V++M+PG+
Sbjct: 794 DMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPGT 828
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/296 (66%), Positives = 239/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 110 AEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 169
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 170 RRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 229
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T TMF V
Sbjct: 230 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTV 289
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH- 237
YYKPRT S+FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 290 YYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQR 349
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W+DSKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR +M
Sbjct: 350 WRDSKWRCLKVRWDETSTIPRPERVSPWKIEP--ALAPPALNSLPMPRPKRPRSNM 403
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 415 ETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA---AADSDGKSDIAK 469
E G S C+LFGI L ++ P VS T + A +SD KS+ +K
Sbjct: 628 EAGKSKDCKLFGIPLFSNHVMPEPV----VSHRNTMNEPAGNLDQQFRAFESDQKSEHSK 683
Query: 470 EFK-----------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 518
K EK + Q K+ +SK C S RS TKVQ QG+A+GR++DL+
Sbjct: 684 SSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQC-GSTRSCTKVQKQGIALGRSVDLSKF 742
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC MV++IFI +
Sbjct: 743 NNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYT 802
Query: 578 SQDVKKMSPGSKLPMFSIEGED 599
++V KM+ S S +GED
Sbjct: 803 KEEVLKMNSVS----LSSKGED 820
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/294 (67%), Positives = 237/294 (80%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEVYAQITLLPE +Q+E + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 119 AEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 178
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 179 RRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 238
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TMF V
Sbjct: 239 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTV 298
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-PH 237
YYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED
Sbjct: 299 YYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDITR 358
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
W SKWRSLKV+WDE +SI RPDRVSPW+IEP +A P + PV + + KRPR
Sbjct: 359 WPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKRPR 409
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 21/247 (8%)
Query: 348 NFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ 407
N +S + G W PR + ++E + A +T P + Q
Sbjct: 594 NGLSTENAGGNWPIRPR---ALNYYEEVVHAQAQAQAQAQAREQATKQP-------VTIQ 643
Query: 408 VETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGK 464
ET + E +CRLFGI L N+ T SA S++ ++ + S + D
Sbjct: 644 EETAKSREG--NCRLFGIPLSNNMNGTDSAMSQRSNLNDAAGLTQLASPKVQDLPDQSKG 701
Query: 465 SDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
S + +E+ + + PK++ +K + S+RS TKV QG+A+GR++DL+ Y+
Sbjct: 702 SKSTNDHREQGRPFQTNNPHPKDAHTKSN---SSRSCTKVHKQGIALGRSVDLSKFQNYE 758
Query: 523 HLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V
Sbjct: 759 ELIAELDRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEV 818
Query: 582 KKMSPGS 588
+KM+PG+
Sbjct: 819 RKMNPGT 825
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/297 (67%), Positives = 241/297 (81%), Gaps = 8/297 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 122 AEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 181
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 182 RRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 241
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA +T TMF V
Sbjct: 242 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTV 301
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 302 YYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKR 361
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
W+DSKWR LKV+WDE ++I RPDRVSPW+IEP V TP + P+ + + KRPR +M
Sbjct: 362 WRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAV---TPPALNPLPVPRPKRPRSNM 415
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 69/260 (26%)
Query: 387 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 446
AHS P P +L Q + K + G +C+LFGI LI + S P+ + S+T
Sbjct: 625 AHSRELMPKP-------ILVQKQEAVKPKDG-NCKLFGIPLIGNPVISEPA--MSYRSMT 674
Query: 447 TE--GHIISTISAAADSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCL--T 494
E GH+ +A DSD KS+ +K K ++++ Q S S+ Q +
Sbjct: 675 NEPAGHL-HLAPSAFDSDQKSEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSV 733
Query: 495 SNRSRTKVQM---------------------------------------------QGVAV 509
S RS TKV + QG+A+
Sbjct: 734 STRSCTKVCIHSLDGCWFLNNEYEIWKMLAGYKIVPQICFIAVSCLMSIGNLVHKQGIAL 793
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 568
GR++DLT YD LI EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW EFC
Sbjct: 794 GRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCG 853
Query: 569 MVKRIFICSSQDVKKMSPGS 588
MV++I+I + ++V++M+PG+
Sbjct: 854 MVRKIYIYTREEVQRMNPGT 873
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/296 (65%), Positives = 238/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTSTHGGFSVL
Sbjct: 75 AESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SK+L
Sbjct: 135 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSSKKL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+T T+F V
Sbjct: 195 VAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVSTGTIFTV 254
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+G ED P
Sbjct: 255 YYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGTEDADPMR 314
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KRPR +M
Sbjct: 315 WPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKRPRANM 368
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 10/220 (4%)
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 430
L E N + P +TPH L Q E + G +C+LFGI LI+
Sbjct: 515 LGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISK 573
Query: 431 ATSSA---PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 487
++ P ++ ++ H + S+ G + K F+ +Q Q+S ++ Q
Sbjct: 574 PAANPMHRPQGEIQLTMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQ 629
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 546
SK S RS KV QG+AVGR++DLT GY LI EL+++F+ G+L + K W I
Sbjct: 630 SKLHS-GSTRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLI 688
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
V+TDDEGDMMLVGDDPW EFC+MV++IF+ + +++++M P
Sbjct: 689 VFTDDEGDMMLVGDDPWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/296 (65%), Positives = 238/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP Q+E + + +PRP+VHSF K LTASDTSTHGGFSVL
Sbjct: 75 AESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SK+L
Sbjct: 135 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSSKKL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQ S+ PSSVISS SMHLGVLATA HAV+T T+F V
Sbjct: 195 VAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVSTGTIFTV 254
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FII ++Y+EAV N +++GMR+KM+FEGE++PE+RF+GTV+G ED P
Sbjct: 255 YYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQRFTGTVIGTEDADPMR 314
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE +S+ RP+ VSPW IE VA P+L ++++KRPR +M
Sbjct: 315 WPGSKWRCLKVRWDETSSVPRPECVSPWNIE--VALTPPSLNPLPVSRSKRPRANM 368
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 10/220 (4%)
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 430
L E N + P +TPH L Q E + G +C+LFGI LI+
Sbjct: 515 LGAEQCPGNWLLPLLPHSYSETTPHLMGLKPQPLYVQEEVVKSKGDG-NCKLFGISLISK 573
Query: 431 ATSSA---PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 487
++ P ++ ++ H + S+ G + K F+ +Q Q+S ++ Q
Sbjct: 574 PAANPMHRPQGEIQLTMENPARHPEQSKSSKYMEIGGFEHEKPFQALEQ---QLS-RDDQ 629
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 546
SK S RS KV QG+AVGR++DLT GY LI EL+++F+ G+L + K W I
Sbjct: 630 SKLHS-GSTRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLI 688
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
V+TDDEGDMMLVGDDPW EFC+MV++IF+ + +++++M P
Sbjct: 689 VFTDDEGDMMLVGDDPWPEFCSMVRKIFVYTREEIQRMDP 728
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/297 (66%), Positives = 238/297 (80%), Gaps = 8/297 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEVYAQITLLPEP Q+E + + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 118 AEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 177
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 178 RRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 237
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T TMF V
Sbjct: 238 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMFTV 297
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y E+V +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 298 YYKPRTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTR 357
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
W SKWRSLKV+WDE SI RPDRVSPW+IEP + +P + PV + + KRPR ++
Sbjct: 358 WAKSKWRSLKVRWDETTSIPRPDRVSPWKIEP---ALSPPALSPVPMPRPKRPRSNL 411
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 419 SCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKK 475
+CRLFGI L+N+ T + S++ ++ + S + +D S + +E+
Sbjct: 642 NCRLFGIPLVNNVNGTDTTLSQRNNLNDPAGPTQMASPKVQDLSDQSKGSKSTNDHREQG 701
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
+ VS + Q+ S RS TKVQ QG+A+GR++DL+ Y+ L+ EL+ +F+
Sbjct: 702 RP-FPVSKPHPKDVQTKTNSCRSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFN 760
Query: 536 GQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+KM+PG+
Sbjct: 761 GELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 814
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/309 (63%), Positives = 243/309 (78%), Gaps = 12/309 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE---PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
AE +TDEVYAQ+ L+PE QNE + +P V SF K LTASDTSTHGGFS
Sbjct: 84 AEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKTLTASDTSTHGGFS 143
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
VLR+HA ECLPPLDM QS PTQELVAKDLHG +WRF+HIFRGQPRRHLL +GWS FV+SK
Sbjct: 144 VLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSK 203
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD F+FLRGE+GEL VGVR RQ S++PSSVISS SMHLGVLATA HA+ T++MF
Sbjct: 204 RLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMF 263
Query: 179 VVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
VYYKPRT S+FII ++Y+E+V N +++G+R++MRFEGE++PE+RF+GT++G E+ P
Sbjct: 264 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPEQRFTGTIIGSENLDP 323
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEV 295
W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR + V
Sbjct: 324 LWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--V 377
Query: 296 PPLDLPSAA 304
PP S+A
Sbjct: 378 PPASPESSA 386
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 104/182 (57%), Gaps = 9/182 (4%)
Query: 413 KTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD 466
KT G+ ++FG ++ NH +S + P + A D +
Sbjct: 601 KTREGSGFKIFGFKVDTASAPTNHLSSPMAATHEPALQTQPSASLNQLQHAQTDCFPEVS 660
Query: 467 IAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 524
++ + ++ +Q +P+ S+ QS S RS TKV QGVA+GR++DL+ YD L
Sbjct: 661 VSTGGTNENEKSIQQAPQSSKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFSDYDEL 720
Query: 525 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 583
EL++MF+ G+L + K W+IVYTD+E DMMLVGDDPW EFC++V++I I + ++V+K
Sbjct: 721 KAELDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQK 780
Query: 584 MS 585
M+
Sbjct: 781 MN 782
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/293 (66%), Positives = 234/293 (79%), Gaps = 6/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 119 AEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHGGFSVL 178
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 179 RRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 238
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T TMF V
Sbjct: 239 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTV 298
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED +
Sbjct: 299 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKR 358
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
W SKWRSLKV+WDE ++I RP+RVS W+IEP A A P L + + KRPR
Sbjct: 359 WPKSKWRSLKVRWDETSNIPRPERVSQWKIEP--ALAPPALNPLPMPRPKRPR 409
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 22/216 (10%)
Query: 392 STPHPSKPNNDTLLEQVETGRKTETG----TSCRLFGIELINHATSSAPS---EKVPVSS 444
STP+ S P + LL + +G+ E + C+LFGI L++ + PS VP S
Sbjct: 614 STPYES-PRSRELLPKPISGKPCEVSKPKDSDCKLFGISLLSSPIAPEPSVSQRNVP-SE 671
Query: 445 LTTEGHIISTISAAADSDGKSDIAK-----------EFKEKKQEQVQVSPKESQSKQSCL 493
H S A D+D KS+ ++ + EK + Q K+ Q+K S
Sbjct: 672 PVGHMHTTSHQQRAFDNDQKSEHSRGGSKPADGLLIDDHEKVLQTSQTHLKDIQAK-SHS 730
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
S RS TKV +G+A+GR++DLT Y LI EL+++F+ G L + K W IVYTD+E
Sbjct: 731 GSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYTDNE 790
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
GDMMLVGDDPW EF MV++I+I ++++KMSPG+
Sbjct: 791 GDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGT 826
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/334 (59%), Positives = 244/334 (73%), Gaps = 8/334 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP----DPCPADSP-RPKVHSFSKVLTASDTSTHGG 56
AE +TDEVYAQ+TLLPE Q E P+ +P RP+VHSF K LTASDTSTHGG
Sbjct: 132 AESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTASDTSTHGG 191
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSVLR+HA ECLPPLDM++ PTQEL AKDLHG EWRF+HIFRGQPRRHLL +GWS FV+
Sbjct: 192 FSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQSGWSVFVS 251
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T T
Sbjct: 252 AKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTGT 311
Query: 177 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
MF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 312 MFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGDS 371
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP V+ N + K RP +
Sbjct: 372 DPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTKRPRPNVIA 431
Query: 294 EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAED 327
+ AP A Q H L + T E+
Sbjct: 432 STTDSSTQAKEVAPKVAAETQQHALQRAFQTQEN 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 107/188 (56%), Gaps = 19/188 (10%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA------AADSDGKSDIAKE 470
G SC+LFGI L + A S P + P S+ +G + SA A + + D +K
Sbjct: 662 GASCKLFGIHLDSPAKSE-PLKSPP--SVAYDGMPHTPGSAELCRMDATEPEKCYDPSKT 718
Query: 471 FKEKKQEQVQVSPKE---------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
K P++ + S +S S RS KV QG+A+GR++DLT GY
Sbjct: 719 PKPLDAPYADSVPEKHLSCQQASRNASGKSRGGSARSCKKVHKQGIALGRSVDLTKFNGY 778
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
L+ EL++MFD G L + K W +VYTD EGDMMLVGDDPW EFCN+V +IFI + ++
Sbjct: 779 MELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDMMLVGDDPWSEFCNIVHKIFIYTREE 838
Query: 581 VKKMSPGS 588
V++M+PG+
Sbjct: 839 VQRMAPGA 846
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 252/351 (71%), Gaps = 27/351 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 7 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 66
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 67 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 126
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVLATA HA
Sbjct: 127 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHA 186
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
V T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+V
Sbjct: 187 VNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIV 246
Query: 230 GVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR
Sbjct: 247 GIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKR 303
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAEDK 328
R S+ P D+ + S +A S HN TQL+V D
Sbjct: 304 SRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHDN 354
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 524 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 577
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 578 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 637
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 638 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 697
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 698 KIFIYTREEVERMNPGA 714
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/350 (58%), Positives = 252/350 (72%), Gaps = 27/350 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 89 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 148
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 149 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 208
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVLATA HA
Sbjct: 209 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHA 268
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
V T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+V
Sbjct: 269 VNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIV 328
Query: 230 GVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR
Sbjct: 329 GIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKR 385
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
R S+ P D+ + S +A S HN TQL+V D
Sbjct: 386 SRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 435
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 606 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 659
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 660 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 719
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 720 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 779
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 780 KIFIYTREEVERMNPGA 796
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/350 (58%), Positives = 252/350 (72%), Gaps = 27/350 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 87 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 146
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 147 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 206
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVLATA HA
Sbjct: 207 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHA 266
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
V T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+V
Sbjct: 267 VNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIV 326
Query: 230 GVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR
Sbjct: 327 GIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKR 383
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
R S+ P D+ + S +A S HN TQL+V D
Sbjct: 384 SRSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 604 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 657
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 658 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 717
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 718 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 777
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 778 KIFIYTREEVERMNPGA 794
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/296 (65%), Positives = 236/296 (79%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ETDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHGGFSVL
Sbjct: 106 AEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVL 165
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 166 RRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 225
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T TMF V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTV 285
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED P
Sbjct: 286 YYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKR 345
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +M
Sbjct: 346 WKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 391 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 447
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 448 EGHII-STISA--AADSDGKSDIAKEFK-EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQ 503
E ++ S + + +S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHSNVHQIHSIESGLKSELPRGSKLADKSVAISEADKLQQTCKSQGTSARSCTKVH 721
Query: 504 MQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDP 562
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDP
Sbjct: 722 KQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDP 781
Query: 563 WHEFCNMVKRIFICSSQDVKKMSPGS 588
W EFC MV++IFI + ++V+KM+PGS
Sbjct: 782 WREFCGMVRKIFIYTREEVQKMNPGS 807
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/294 (65%), Positives = 236/294 (80%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 113 AEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVL 172
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 173 RRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 232
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T TMF V
Sbjct: 233 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTV 292
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED +
Sbjct: 293 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKR 352
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
W SKWRSLKV+WDE ++I RP+RVS W+IEP +A P + P+ + + KRPR
Sbjct: 353 WPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA---PLALNPLPMPRPKRPR 403
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 19/208 (9%)
Query: 399 PNNDTLLEQVETGRKTETG----TSCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHI 451
P + LL + +G+ E + C+LFGI L++ A+ + S++ S H
Sbjct: 613 PRSRELLSKPISGKPCEVSKLKDSDCKLFGISLLSSRPIASEPSLSQRNVTSESVGHMHT 672
Query: 452 ISTISAAADSDGKSDIAKEFK----------EKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
S A ++D KS+ ++ K EK + Q K+ Q+K S S RS TK
Sbjct: 673 ASHHQRAIENDQKSEHSRGSKPADGLLIDDHEKVLQTSQPHLKDVQAK-SHSGSARSCTK 731
Query: 502 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 560
V +G+A+GR++DLT Y LI EL+++F+ G+L + K W IVYTD+EGDMMLVGD
Sbjct: 732 VHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQKDWLIVYTDNEGDMMLVGD 791
Query: 561 DPWHEFCNMVKRIFICSSQDVKKMSPGS 588
DPW EF MV++I+I ++++KMSPG+
Sbjct: 792 DPWQEFVAMVRKIYIYPKEEIQKMSPGT 819
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/349 (58%), Positives = 252/349 (72%), Gaps = 27/349 (7%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDTS 52
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDTS
Sbjct: 88 EPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTS 147
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 148 THGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWS 207
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 172
FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS +MHLGVLATA HAV
Sbjct: 208 VFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLATAWHAV 267
Query: 173 ATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG
Sbjct: 268 NTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVG 327
Query: 231 VEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
+ P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR
Sbjct: 328 IGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRS 384
Query: 290 RLSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
R S+ P D+ + S +A S HN TQL+V D
Sbjct: 385 RSSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 433
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/293 (66%), Positives = 236/293 (80%), Gaps = 6/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 101 AEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 160
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 161 RRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRL 220
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA+ T T+F V
Sbjct: 221 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTV 280
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GTVVG+ED P
Sbjct: 281 YYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKR 340
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 341 WRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 106/180 (58%), Gaps = 11/180 (6%)
Query: 420 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQ 478
C+LFG LI+ PS + VS + H+ + +++D KSD +K +
Sbjct: 626 CKLFGFSLISGPIVPEPSLSQRNVSEPAGQMHLTAHQQRTSENDEKSDHSKGSRPVDDLV 685
Query: 479 VQVSPKESQSKQS---------CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
V + Q+ QS S RS TKV +G+A+GR++DLT GYD L+ EL+
Sbjct: 686 VDDHDRPLQTSQSHTKDVQAKPLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAELD 745
Query: 530 EMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
++F+ G+L T+ W IVYTD+EGDMMLVGDDPW EFC MV +I+I ++++KMSPG+
Sbjct: 746 QLFEFGGELLSTKKDWLIVYTDNEGDMMLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGT 805
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/293 (66%), Positives = 237/293 (80%), Gaps = 6/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 101 AEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 160
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRFKHIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 161 RRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRL 220
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T T+F V
Sbjct: 221 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTIFTV 280
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E++ N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 281 YYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPKR 340
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
W+DSKWR LKV+WDE ++ RP+RVSPW+IEP A A P L + + KRPR
Sbjct: 341 WRDSKWRCLKVRWDETSNTPRPERVSPWKIEP--ALAPPALNPLSMPRPKRPR 391
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 110/181 (60%), Gaps = 13/181 (7%)
Query: 420 CRLFGIELINHATSSAPS-EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK------ 472
C+LFG LI+ T PS + VS + H+ + +++D K D +K +
Sbjct: 626 CKLFGFSLISGPTLPEPSLSQRNVSEAADQMHLTAHQQRTSENDEKLDHSKGSRPVDDIV 685
Query: 473 ----EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
++ Q+ K+ Q+K S RS TKV +G+A+GR++DLT GYD L+ EL
Sbjct: 686 VDDQDRPLRTSQLHTKDVQAK-PLSGSARSCTKVHKKGIALGRSVDLTKYSGYDELVAEL 744
Query: 529 EEMFDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
+++F+ G+L T+ W IV+TD+EGDMMLVGDDPW EFC MV++I+I ++++KMSPG
Sbjct: 745 DQLFEFGGELLSTKKDWLIVFTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPG 804
Query: 588 S 588
+
Sbjct: 805 T 805
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 237/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 109 AEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVL 168
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 169 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 228
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 229 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTV 288
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED S
Sbjct: 289 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKR 348
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR ++
Sbjct: 349 WPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRANV 402
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 112/184 (60%), Gaps = 14/184 (7%)
Query: 418 TSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI-ISTISAAADSDGKSDIAKEFK---- 472
+ C+LFG L++ T PS ++ T H+ IS+ ++D KS+ +K K
Sbjct: 608 SDCKLFGFSLLSSPTMLEPSLSQRNATSETSSHMQISSQHHTFENDQKSEHSKSSKPADK 667
Query: 473 -------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
EK+ + Q K+ Q K S RS TKV +G+A+GR++DLT YD L
Sbjct: 668 LVIVDEHEKQLQTSQPHVKDVQLKPQS-GSARSCTKVHKKGIALGRSVDLTKFSDYDELT 726
Query: 526 DELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL+++F+ +G+L + K W +V+TD+EGDMMLVGDDPW EFC+MV++I+I ++++KM
Sbjct: 727 AELDQLFEFRGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKM 786
Query: 585 SPGS 588
SPG+
Sbjct: 787 SPGT 790
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/292 (68%), Positives = 239/292 (81%), Gaps = 4/292 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITL+PE Q+E +PD + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPDTDEVYAQITLVPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM Q P QEL+A DLHG EW F+HI RGQPRRHLLTTGWS FV+SK+LV
Sbjct: 144 RHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSVFVSSKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD +FLRG NG+L VGVR L RQQ++MPSSVISS S+ LGVLATAS+A++T++MF ++
Sbjct: 204 AGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALSTRSMFSIF 263
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE-DFSPHW 238
YKPRTS +FI+S+NKYLEA ++K +VGMR+KMRFEGE+ PERRFSGT+VGVE D S W
Sbjct: 264 YKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEADKSSGW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
DS+WRSLKVQWDEP+SI RPDRVSPWE+EP VA++ ++ QP +NKR R
Sbjct: 324 ADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA-QRNKRAR 374
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 17/189 (8%)
Query: 412 RKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI-SAAADSDGKSDIAKE 470
RK TG CRLFGI+LI++ E P+++++ G + S A+SD +SD A
Sbjct: 462 RKQGTGNGCRLFGIQLIDNINME---ENSPLATISGTGVNDQPLHSLDANSDQQSDPANL 518
Query: 471 FKEK------KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL 524
+ + E+ SP+ESQSKQ RS TKV MQG+AVGRA+DLT Y+ L
Sbjct: 519 NQSDLPSISCEPEKCLRSPQESQSKQI-----RSCTKVHMQGMAVGRAVDLTRFDCYEDL 573
Query: 525 IDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKK 583
+ +LE MFDIKGQL TK W++VYTDDE DMM+VGDDPW+EFC+MV++I I +S++V+K
Sbjct: 574 LKKLEYMFDIKGQLCGSTKNWQVVYTDDEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRK 632
Query: 584 MSPGSKLPM 592
+SP K P+
Sbjct: 633 LSPKIKAPV 641
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 237/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 109 AEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVL 168
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 169 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 228
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 229 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTV 288
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED S
Sbjct: 289 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKR 348
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR ++
Sbjct: 349 WPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRANV 402
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 15/192 (7%)
Query: 386 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 445
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 577 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 635
Query: 446 TTEGHI-ISTISAAADSDGKSDIAKEFK-----------EKKQEQVQVSPKESQSKQSCL 493
T H+ IS+ ++D KS+ +K K EK+ + Q K+ Q K
Sbjct: 636 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 694
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 695 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 754
Query: 553 GDMMLVGDDPWH 564
GDMMLVGDDPW
Sbjct: 755 GDMMLVGDDPWQ 766
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 237/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 109 AEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVL 168
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 169 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 228
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 229 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTV 288
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED S
Sbjct: 289 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKR 348
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR ++
Sbjct: 349 WPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRANV 402
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 246/330 (74%), Gaps = 18/330 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDP------------CPADSPRPKVHSFSKVLTAS 49
AE +TDEVYAQ+TLLP+ Q+E T+ P + P++HSF K LTAS
Sbjct: 93 AEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHSFCKTLTAS 152
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +
Sbjct: 153 DTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQPRRHLLQS 212
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMHLGVLATA
Sbjct: 213 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATAW 272
Query: 170 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
HAV T +MF VYYKPRTS +F++S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT
Sbjct: 273 HAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGT 332
Query: 228 VVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP + +P+ V P+ +
Sbjct: 333 IVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAI---SPSPVNPLPVRF 389
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSH 316
KR R S+ P D+P+ + S +A+S
Sbjct: 390 KRSRSSVNASPSDVPTVSREVASKVMAESQ 419
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 25/191 (13%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------DGKSDI 467
GTS +LFGI L +P + P+ S+ +G + ++ S + D SD
Sbjct: 618 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDIVGVDNCSDP 671
Query: 468 AKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRALDLTTL 518
+K K + E Q P+ +Q+ Q+ + +S RS KV QG A+GR++DLT
Sbjct: 672 SKTVKPFDGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKF 731
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
YD LI EL++MFD G+L K W +VYTD+EGD+MLVGDDPW+EFC+MV +IFI +
Sbjct: 732 TCYDELIAELDQMFDFDGELKNPCKNWLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYT 791
Query: 578 SQDVKKMSPGS 588
++V++M+PG+
Sbjct: 792 REEVERMNPGA 802
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 237/296 (80%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TL+PEP+Q+E + PA PR VHSF K LTASDTSTHGGFSVL
Sbjct: 21 AEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVL 80
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 81 RRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 140
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV T TMF V
Sbjct: 141 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTV 200
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E++ N + +GMR+KMRFEGE++PE+RF+GT+VG+ED S
Sbjct: 201 YYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKR 260
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE ++I RP+RVSPW+IEP A A P L + + KRPR ++
Sbjct: 261 WPTSKWRCLKVRWDETSNIPRPERVSPWKIEP--ALAPPALNPLPMPRPKRPRANV 314
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 15/216 (6%)
Query: 386 PAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSL 445
P + + +PH + + + ++ K + + C+LFG L++ T PS ++
Sbjct: 489 PPPTQYESPHSRELSQKQMSAKISEAAKPKD-SDCKLFGFSLLSSPTMLEPSLSQRNATS 547
Query: 446 TTEGHI-ISTISAAADSDGKSDIAKEFK-----------EKKQEQVQVSPKESQSKQSCL 493
T H+ IS+ ++D KS+ +K K EK+ + Q K+ Q K
Sbjct: 548 ETSSHMQISSQHHTFENDQKSEHSKSSKPADKLVIVDEHEKQLQTSQPHVKDVQLKPQS- 606
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
S RS TKV +G+A+GR++DLT YD L EL+++F+ +G+L + K W +V+TD+E
Sbjct: 607 GSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTDNE 666
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
GDMMLVGDDPW EFC+MV++I+I ++++KMSPG+
Sbjct: 667 GDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 702
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/340 (58%), Positives = 253/340 (74%), Gaps = 26/340 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +TDEV+AQ+TL+PE +Q+E TP P + RP VHSF K LTASDTSTHGGF
Sbjct: 120 AEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQS---RPHVHSFCKTLTASDTSTHGGF 176
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM + P+QELVAKDLHG EW F+HIFRGQPRRHLL +GWS FV+S
Sbjct: 177 SVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVFVSS 236
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRGENGEL VGVR RQQS++PSSVISS SMHLGVLATASHA+ T TM
Sbjct: 237 KRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATASHAIQTGTM 296
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF- 234
F VYYKPRT S+FI+ +Y+E++ +++GMR+KMRFEGE++PE+RF+GT++G+ D
Sbjct: 297 FTVYYKPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPEQRFTGTIIGIGDVD 356
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
S W +SKWR LKV+WDE S+ RPD++SPW+IEP +A P + P+ +++ KRPR ++
Sbjct: 357 STRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALA---PIALNPLPVSRTKRPRPNI 413
Query: 294 -----------EVPP-LDLPSAASAPWSARLAQSHNLTQL 321
VPP + + +AA +R+ Q +T L
Sbjct: 414 LPTSPDVSALTRVPPKVAVDAAAQDHGFSRVLQGQEITTL 453
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 105/205 (51%), Gaps = 40/205 (19%)
Query: 392 STPHPSKPNNDTL-----LEQVETGR------------KTETGTSCRLFGIELIN----H 430
STP P +P N + L++ +GR K++ +C+LFGI L + H
Sbjct: 584 STPVPQQPTNWLISSTPSLKESASGRVHTDHYAQPEPVKSKGSGNCKLFGISLKSSSQQH 643
Query: 431 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE-----------KKQEQV 479
TSS+ ++ + E A +SD S+ K K K + V
Sbjct: 644 ETSSSHAK------VADEAAQTFCKPQALESDRLSEPLKCAKSLDTLCSDSDEVKTNQPV 697
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 539
Q +++ +K C +S RS TKVQ QG A+GR++DL Y+ LI EL+ MF+ +G+L
Sbjct: 698 QQHSRDAHNKPLC-SSTRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELM 756
Query: 540 TRTK-WEIVYTDDEGDMMLVGDDPW 563
K W +VYTD+EGDMMLVGDDPW
Sbjct: 757 NSNKNWLVVYTDNEGDMMLVGDDPW 781
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/296 (65%), Positives = 236/296 (79%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHGGFSVL
Sbjct: 106 AEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVL 165
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 166 RRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 225
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T T+F V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTV 285
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED P
Sbjct: 286 YYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKR 345
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +M
Sbjct: 346 WKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 133/223 (59%), Gaps = 25/223 (11%)
Query: 391 HSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVS---SLTT 447
HS+ SKP +L Q + K + G +C+LFGI L+ + P+ PV ++
Sbjct: 612 HSSELMSKP----MLFQNQDILKPKDG-NCKLFGISLVKN-----PAIPDPVGLNRNMMN 661
Query: 448 EGHIISTISA---AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM 504
E ++ +++S KS++ + K K + + K Q+ +S TS RS TKV
Sbjct: 662 EADVMHPNVHQIHSSESGLKSELPRVLKLDKSVAISEADKLQQTCKSQGTSARSCTKVHK 721
Query: 505 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 563
QG+A+GR++DL+ YD L+ EL+++F+ G+L K W IVYTDDEGDMMLVGDDPW
Sbjct: 722 QGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAPKKNWLIVYTDDEGDMMLVGDDPW 781
Query: 564 HEFCNMVKRIFICSSQDVKKMSPGS------KLPMFSIEGEDI 600
EFC MV++IFI + ++V+KM+PGS + P S+EGE++
Sbjct: 782 REFCGMVRKIFIYTREEVQKMNPGSLNLKGDENP--SVEGEEV 822
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/296 (65%), Positives = 236/296 (79%), Gaps = 6/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQITLLPE +Q+E +P P R VHSF K LTASDTSTHGGFSVL
Sbjct: 106 AEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVL 165
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 166 RRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 225
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQ ++PSSVISS SMHLGVLATA HA++T T+F V
Sbjct: 226 VAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTV 285
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT++G ED P
Sbjct: 286 YYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKR 345
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
WKDSKWR LKV+WDE ++I+RP++VSPW+IEP A A P L + + KRPR +M
Sbjct: 346 WKDSKWRCLKVRWDETSTISRPEKVSPWKIEP--ALAPPALNPLPMTRPKRPRSNM 399
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHG
Sbjct: 21 AEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 80
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 81 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 140
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 141 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 200
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 201 TMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGD 260
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 261 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 297
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 552 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 611
Query: 474 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 612 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 671
Query: 526 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 672 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 731
Query: 585 SPGS 588
+PG+
Sbjct: 732 NPGT 735
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHG
Sbjct: 86 AEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 145
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 146 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 205
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 206 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 265
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 266 TMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGD 325
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 326 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 362
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 617 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 676
Query: 474 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 677 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 736
Query: 526 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 737 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 796
Query: 585 SPGS 588
+PG+
Sbjct: 797 NPGT 800
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHG
Sbjct: 103 AEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 162
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 163 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 222
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 223 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 282
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 283 TMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGD 342
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 343 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 474 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 526 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 585 SPGS 588
+PG+
Sbjct: 814 NPGT 817
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHG
Sbjct: 102 AEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 161
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 162 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 221
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 222 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 281
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 282 TMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGD 341
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 342 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 474 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 693 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 752
Query: 526 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 753 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 812
Query: 585 SPGS 588
+PG+
Sbjct: 813 NPGT 816
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/377 (56%), Positives = 259/377 (68%), Gaps = 30/377 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT----------TPDPCPADSPRPKVHSFSKVLTASDT 51
AE +TDEVYAQ+ L+PEP Q+E T PA RP V SF K LTASDT
Sbjct: 87 AEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPA---RPAVRSFCKTLTASDT 143
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 144 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 203
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS SMHLGVLATA HA
Sbjct: 204 SVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLATAWHA 263
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ T+TMF VYYKPRT S+FII +KY E+V N +++G R+KMRFEGE++PE+RF+GT+V
Sbjct: 264 INTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTGTIV 323
Query: 230 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKR 288
G ++ W +S WRSLKV+WDE ++I RPDRVSPWEIEP AS+ P V P+ L++ KR
Sbjct: 324 GSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP--ASSPP--VNPLPLSRAKR 379
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSN 346
R + VPP AS S R + + + +N V H + + +
Sbjct: 380 SRPN--VPP------ASPESSVRTKEGATKADMDCAQAQRNQNNTVLPGHEQRSNKLTDI 431
Query: 347 SNFMSRTQSDGEWLTSP 363
++F + Q W T P
Sbjct: 432 NDFDATVQKPMVWSTPP 448
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 26/189 (13%)
Query: 413 KTETGTSCRLFGIEL------INHATSSAPSEKVPV---------SSLTTEGHIISTISA 457
KT G+ ++FG ++ NH S + PV L T+ ++S
Sbjct: 607 KTTEGSDFKIFGFKVDTASAGFNHLNSPMAATHEPVLQTQPSVSLDHLQTDCSPEVSLSI 666
Query: 458 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 517
A +D EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 667 AGTTD---------NEKNIQQCPQSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSK 716
Query: 518 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
V YD L EL++MFD G+L + K W+IVYTD+EGDMMLVGDDPW EFC+MV++I I
Sbjct: 717 FVDYDELTAELDKMFDFDGELMSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICIY 776
Query: 577 SSQDVKKMS 585
+ ++V+KM+
Sbjct: 777 TKEEVQKMN 785
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/277 (67%), Positives = 224/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE Q E P A RP+VHSF K LTASDTSTHG
Sbjct: 103 AEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 162
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 163 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 222
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 223 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 282
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFEGE++PE+RF+GT+VG+ D
Sbjct: 283 TMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQRFTGTIVGMGD 342
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 343 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 379
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 110/184 (59%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS---SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S +PS V + T G + + SD +K K
Sbjct: 634 GASCKLFGIHLDSPAKSEPLKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 693
Query: 474 KKQEQVQVSPKESQSKQ-----SCLT---SNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P++ S+Q SC + S RS KV QG+A+GR++DLT GY+ LI
Sbjct: 694 LDTPQPDSVPEKPSSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELI 753
Query: 526 DELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + ++V++M
Sbjct: 754 AELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRM 813
Query: 585 SPGS 588
+PG+
Sbjct: 814 NPGT 817
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/316 (62%), Positives = 236/316 (74%), Gaps = 22/316 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQ------NEPTTPDPC-------PADSPRPKVHSFSKVLTA 48
AE +TDEVYAQ+TLLPE Q N + D PA + RP+VHSF K LTA
Sbjct: 95 AEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTA 154
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 155 SDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 214
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
+GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 215 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATA 274
Query: 169 SHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
HAV T TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+G
Sbjct: 275 WHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTG 334
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA- 284
T+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A
Sbjct: 335 TIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAP 391
Query: 285 --KNKRPRLSMEVPPL 298
K RP + P L
Sbjct: 392 RTKRARPNVLASSPDL 407
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 332 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 389
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 534 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 590
Query: 390 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 437
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 591 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 647
Query: 438 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 487
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 648 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 704
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 546
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 705 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 763
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 764 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 805
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/271 (69%), Positives = 227/271 (83%), Gaps = 4/271 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPE +Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 117 AEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVL 176
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 177 RRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 236
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T T+F V
Sbjct: 237 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTLFTV 296
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 297 YYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPGR 356
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
WK+SKWR LKV+WDE +++ RP+RVSPW+IE
Sbjct: 357 WKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 29/217 (13%)
Query: 403 TLLEQVETGRKTETGTSCRLFGIEL------INHATSSAPSEKVPVSSLTTEGHIISTIS 456
L+++ ++G+ E +C+LFGI L A + + P+S + H ++
Sbjct: 626 VLMQEHDSGKSLEG--NCKLFGIPLKISKPVAPEAAGTTITMNEPLSHIQPVSHQLTF-- 681
Query: 457 AAADSDGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 509
+SD KS+ +K K EK + + K++ K S RS TKV QG+A+
Sbjct: 682 ---ESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQN-GSTRSCTKVHKQGIAL 737
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 568
GR++DL YD LI EL+ +F+ G+L K W IVYTDDE DMMLVGDDPW EF
Sbjct: 738 GRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDEDDMMLVGDDPWQEFVG 797
Query: 569 MVKRIFICSSQDVKKMSPGS------KLPMFSIEGED 599
MV++I I + ++ +K+ PG+ + PM +EGED
Sbjct: 798 MVRKIVIYTKEEAQKIKPGALNSKGVENPM-DMEGED 833
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/308 (62%), Positives = 234/308 (75%), Gaps = 12/308 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT--------PDPCPADSPRPKVHSFSKVLTASDTST 53
AEQ+TDEVYAQ+TLLPE QNE + P PA RP+VHSF K LTASDTST
Sbjct: 86 AEQDTDEVYAQLTLLPE-KQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTLTASDTST 144
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
HGGFSVLR+HA ECLPPLDM+Q+ PTQEL+ +DLHG EWRF+HIFRGQP+RHLL +GWS
Sbjct: 145 HGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHLLQSGWSV 204
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 173
FV++KRLVA D F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV
Sbjct: 205 FVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVN 264
Query: 174 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
T +MF VYYKPRTS +F++ + Y E++ ++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 265 TGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQRFTGTIVGI 324
Query: 232 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
D P W DSKWRSLKV+WDE +S+ RPDRVSPW+IEP V+ + N +Q K RP
Sbjct: 325 GDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQAPRNKRSRPN 384
Query: 291 LSMEVPPL 298
P L
Sbjct: 385 AIASSPEL 392
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 417 GTSCRLFGIELINHATS----SAPS------EKVPVSSLTTEGHIISTISAAADSDGKSD 466
G+ C LFG L A S S PS + P S + +I + S S
Sbjct: 610 GSPCMLFGFPLDGPAKSEPMISPPSVAYDGMPETPCSEKQPQPEVIELDRSPGTSKLVSP 669
Query: 467 IAKEFKEKKQEQVQVSPKESQSKQSCL-TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLI 525
+ + + + Q P+ +++ QS L S RS KV QG+A+GR++DLT YD LI
Sbjct: 670 LDENQSDSAMAKHQTCPEATRNIQSKLQCSTRSCKKVHKQGIALGRSVDLTRFTCYDELI 729
Query: 526 DELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
EL+ MFD G+L + W +VYTD + DMMLVGDDPW+EFC++V +IFI + ++V KM
Sbjct: 730 AELDRMFDFGGELKGSCENWMVVYTDSDNDMMLVGDDPWNEFCDVVHKIFIYTREEVSKM 789
Query: 585 SPGS 588
+PG+
Sbjct: 790 NPGA 793
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/315 (63%), Positives = 236/315 (74%), Gaps = 21/315 (6%)
Query: 2 AEQETDEVYAQITLLPEP-----SQNEPTTPDPC-------PADSPRPKVHSFSKVLTAS 49
AE +TDEVYAQ+TLLPE S N + D PA + RP+VHSF K LTAS
Sbjct: 95 AEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTAS 154
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EWRF+HIFRGQPRRHLL +
Sbjct: 155 DTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 214
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA
Sbjct: 215 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAW 274
Query: 170 HAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
HAV T TMF VYYKPRT S+F++ + Y E++ ++GMR+KM FEGE++ E+RF+GT
Sbjct: 275 HAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGT 334
Query: 228 VVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA-- 284
+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP + +P+ V P+ A
Sbjct: 335 IVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP---ANSPSPVNPLPAPR 391
Query: 285 -KNKRPRLSMEVPPL 298
K RP + P L
Sbjct: 392 TKRARPNVLASSPDL 406
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 332 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 389
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 533 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 589
Query: 390 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 437
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 590 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 646
Query: 438 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 487
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 647 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 703
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 546
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 704 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 762
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 763 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 804
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 244/327 (74%), Gaps = 13/327 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASDTSTHGGF 57
AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASDTSTHGGF
Sbjct: 104 AEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGF 163
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++
Sbjct: 164 SVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSA 223
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TM
Sbjct: 224 KRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTM 283
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDF 234
F VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+VG V+
Sbjct: 284 FTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPD 343
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS- 292
W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + + KRPR +
Sbjct: 344 QAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNA 400
Query: 293 -MEVPPLDLPSAASAPWSARLAQSHNL 318
+P P+ +AP Q H L
Sbjct: 401 VASLPESSAPTKEAAPKVTLETQQHAL 427
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 634 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 689
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 690 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 749
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 750 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 808
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/315 (60%), Positives = 238/315 (75%), Gaps = 19/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVHSFSKVLTA 48
AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++HSF K LTA
Sbjct: 94 AEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTA 153
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 154 SDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 213
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
+GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMHLGVLATA
Sbjct: 214 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATA 273
Query: 169 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE++ E+RF+G
Sbjct: 274 WHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTG 333
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
T+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+ V P+ +
Sbjct: 334 TIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVR 390
Query: 286 NKRPRLSMEVPPLDL 300
KR R S+ P D+
Sbjct: 391 FKRSRSSVNASPSDV 405
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 537 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 244/327 (74%), Gaps = 13/327 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASDTSTHGGF 57
AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASDTSTHGGF
Sbjct: 21 AEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGF 80
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++
Sbjct: 81 SVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSA 140
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TM
Sbjct: 141 KRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTM 200
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDF 234
F VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+VG V+
Sbjct: 201 FTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPD 260
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS- 292
W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + + KRPR +
Sbjct: 261 QAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNA 317
Query: 293 -MEVPPLDLPSAASAPWSARLAQSHNL 318
+P P+ +AP Q H L
Sbjct: 318 VASLPESSAPTKEAAPKVTLETQQHAL 344
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 551 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 606
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 607 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 666
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 667 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 725
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/315 (60%), Positives = 238/315 (75%), Gaps = 19/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVHSFSKVLTA 48
AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++HSF K LTA
Sbjct: 94 AEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTA 153
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 154 SDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRHLLQ 213
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
+GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMHLGVLATA
Sbjct: 214 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATA 273
Query: 169 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE++ E+RF+G
Sbjct: 274 WHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTG 333
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
T+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+ V P+ +
Sbjct: 334 TIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVR 390
Query: 286 NKRPRLSMEVPPLDL 300
KR R S+ P D+
Sbjct: 391 FKRSRSSVNASPSDV 405
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 537 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 245/331 (74%), Gaps = 20/331 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--------PTTPDPCPADSPRPKVHSFSKVLTASDTST 53
AE + DEVYAQ+TLLPE Q E P +P PA RP+VHSF K LTASDTST
Sbjct: 104 AEPDNDEVYAQLTLLPESKQPEENGSSEEMPASP---PAALARPRVHSFCKTLTASDTST 160
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
HGGFSVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 161 HGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSV 220
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 173
FV++KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV
Sbjct: 221 FVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVN 280
Query: 174 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG- 230
T TMF VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+VG
Sbjct: 281 TGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGN 340
Query: 231 VEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRP 289
V+ W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + + KRP
Sbjct: 341 VDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRPKRP 397
Query: 290 RLS--MEVPPLDLPSAASAPWSARLAQSHNL 318
R + +P P+ +AP Q H L
Sbjct: 398 RSNAVASLPESSAPTKEAAPKVTLETQQHAL 428
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 635 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 690
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 691 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 750
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 751 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 809
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/315 (60%), Positives = 238/315 (75%), Gaps = 19/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-------------PDPCPADSPRPKVHSFSKVLTA 48
AE +TDEVYAQ+TLLP+ Q+E T+ P PA S ++HSF K LTA
Sbjct: 94 AEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKTLTA 153
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSVLR+HA ECLPPLDM+Q P QELVA+DLHG EWRF+HIFRGQPRRHLL
Sbjct: 154 SDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRGQPRRHLLQ 213
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
+GWS FV++KRLVAGD F+FLRGENGEL VGVR R Q+++PSSVISS SMHLGVLATA
Sbjct: 214 SGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLATA 273
Query: 169 SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
HAV T +MF VYYKPRTS +F++S +Y E++ +++GMR++MRFEGE++ E+RF+G
Sbjct: 274 WHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQRFTG 333
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
T+VG+ P W DSKWRSLKV+WDE +S+ RP+RVSPW+IEP V +P+ V P+ +
Sbjct: 334 TIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAV---SPSPVNPLPVR 390
Query: 286 NKRPRLSMEVPPLDL 300
KR R S+ P D+
Sbjct: 391 FKRSRSSVNASPSDV 405
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 22/173 (12%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
GTS +LFGI L +P + P+ S + + ++ D++ + E + Q
Sbjct: 620 GTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPTDNN---EPCSEATQNIQ 670
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
+VQ S S RS KV QG A+GR++DLT YD LI EL++MFD G
Sbjct: 671 NKVQSS------------STRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDG 718
Query: 537 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
+L + + W +VYTD+EGDMMLVGDDPW+EFC+MV +IFI + ++V++M+PG+
Sbjct: 719 ELKSPCRNWLVVYTDNEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGA 771
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 244/327 (74%), Gaps = 13/327 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASDTSTHGGF 57
AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASDTSTHGGF
Sbjct: 137 AEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGF 196
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++
Sbjct: 197 SVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSA 256
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TM
Sbjct: 257 KRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTM 316
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDF 234
F VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+VG V+
Sbjct: 317 FTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPD 376
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS- 292
W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + + KRPR +
Sbjct: 377 QAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNA 433
Query: 293 -MEVPPLDLPSAASAPWSARLAQSHNL 318
+P P+ +AP Q H L
Sbjct: 434 VASLPESSAPTKEAAPKVTLETQQHAL 460
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 667 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 722
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 723 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 782
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 563
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 783 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 816
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/327 (59%), Positives = 244/327 (74%), Gaps = 13/327 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASDTSTHGGF 57
AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASDTSTHGGF
Sbjct: 104 AEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGF 163
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SVLR+HA ECLPPLDM + PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++
Sbjct: 164 SVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSA 223
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD F+FLRG++GEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T TM
Sbjct: 224 KRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHAVNTGTM 283
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG-VEDF 234
F VYYKPRTS +F++ ++Y+E++ + +GMR+KMRFEGE++PE+RF+GT+VG V+
Sbjct: 284 FTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQRFTGTIVGNVDPD 343
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLS- 292
W +SKWR LKV+WDE +SI RP+RVSPW+IEP V +P + P+ + + KRPR +
Sbjct: 344 QAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAV---SPPPINPLPVHRPKRPRSNA 400
Query: 293 -MEVPPLDLPSAASAPWSARLAQSHNL 318
+P P+ +AP Q H L
Sbjct: 401 VASLPESSAPTKEAAPKVTLETQQHAL 427
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/277 (66%), Positives = 223/277 (80%), Gaps = 9/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT------TPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
AE +TDEVYAQ+TLLPE + E P A RP+VHSF K LTASDTSTHG
Sbjct: 102 AEPDTDEVYAQLTLLPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHG 161
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSVLR+HA ECLPPLDM++ PTQELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV
Sbjct: 162 GFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 221
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSSVISS SMHLGVLATA HAV T
Sbjct: 222 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAVNTG 281
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF VYYKPRTS +F++ ++Y+E++ +++GMR+KMRFE E++PE+RF+GT+VG+ D
Sbjct: 282 TMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQRFTGTIVGMGD 341
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
P W +SKWRSLKV+WDE +SI RP+RVSPW+IEP
Sbjct: 342 SDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEP 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 105/189 (55%), Gaps = 17/189 (8%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADSDGKSDIAKEFKE 473
G SC+LFGI L + A S V + T G + + SD +K K
Sbjct: 633 GASCKLFGIHLDSPAKSEPSKSPSSVVYDGTPQTPGATEWRRPDVTEVEKCSDPSKAMKP 692
Query: 474 KKQEQVQVSPKE-------------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
Q P++ + S +S S RS KV QG+A+GR++DLT G
Sbjct: 693 LDTPQPDSVPEKPSSQQASSQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNG 752
Query: 521 YDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
Y+ LI EL++MFD G+L + +W +VYTD+EGDMMLVGDDPW EFC+MV +IFI + +
Sbjct: 753 YEELIAELDDMFDFNGELKGPKKEWMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTRE 812
Query: 580 DVKKMSPGS 588
+V++M+PG+
Sbjct: 813 EVQRMNPGT 821
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/294 (66%), Positives = 236/294 (80%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE ++DEVYAQITLLPE Q+E + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 151 AEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 210
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 211 RRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 270
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++ SSVISS SMHLGVLATA HA++T TMF V
Sbjct: 271 VAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVISSHSMHLGVLATAWHAISTGTMFSV 330
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRT S+FI+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P
Sbjct: 331 YYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTR 390
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
W SKWRSLKV+WDE +SI RPDRVSPW++EP +A P + PV + + KRPR
Sbjct: 391 WAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALA---PPALSPVPMPRPKRPR 441
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 11/190 (5%)
Query: 406 EQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKS 465
E VE K+ G +CRLFGI L+N+ + + + T G T D +S
Sbjct: 669 EMVEDTAKSRDG-NCRLFGIPLVNNVNVTESTMSPRNNFNDTAGLTQMTSPKVQDLSDQS 727
Query: 466 DIAKEFKEKK------QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLV 519
+K +++ Q PK+ +K S+RS TKVQ QG+A+GR++DL+
Sbjct: 728 KGSKSTNDQREQGRPFQANHHPHPKDVHTKTH---SSRSCTKVQKQGIALGRSVDLSKFQ 784
Query: 520 GYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 578
Y+ LI EL+ MF+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++I I +
Sbjct: 785 NYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCGMVRKISIYTK 844
Query: 579 QDVKKMSPGS 588
++V+KM+PG+
Sbjct: 845 EEVRKMNPGT 854
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 235/331 (70%), Gaps = 40/331 (12%)
Query: 2 AEQETDEVYAQITLLPEP---------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 52
AE +TDEVYAQ+TLLPE + E P PA + RP+VHSF K LTASDTS
Sbjct: 82 AEPDTDEVYAQLTLLPEKWYGNVSKDKVEEEEVVP---PAATERPRVHSFCKTLTASDTS 138
Query: 53 THGGFSVLRKHATECLPPL-------------------DMNQSTPTQELVAKDLHGYEWR 93
THGGFSVLR+HA ECLPPL DM+Q PTQELVAKDLHG EWR
Sbjct: 139 THGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWR 198
Query: 94 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 153
F+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQQ+++PSS
Sbjct: 199 FRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSS 258
Query: 154 VISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYK 211
VISS SMHLGVLATA HAV T TMF VYYKPRT S+F++ + Y E++ ++GMR+K
Sbjct: 259 VISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFK 318
Query: 212 MRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
M FEGE++ E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVSPW+IEP
Sbjct: 319 MTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEP- 377
Query: 271 VASATPNLVQPVLA---KNKRPRLSMEVPPL 298
+ +P+ V P+ A K RP + P L
Sbjct: 378 --ANSPSPVNPLPAPRTKRARPNVLASSPDL 406
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 18/183 (9%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK---- 472
G+SC LFGI L + A P + S+ +G + A + D SD +K K
Sbjct: 629 GSSCMLFGISLDSPAK---PELLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDG 682
Query: 473 ---EKKQEQVQVSP---KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLID 526
+ E+ Q P K QSKQ S+RS KV QG+A+GR++DLT YD LI
Sbjct: 683 AQHDSATEKHQSCPDGTKNIQSKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIA 741
Query: 527 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
EL++MFD G+L++ +K W +VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+
Sbjct: 742 ELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMN 801
Query: 586 PGS 588
PG+
Sbjct: 802 PGA 804
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 236/338 (69%), Gaps = 47/338 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQN----------------EPTTPDPCPADSPRPKVHSFSKV 45
AE +TDEVYAQ+TLLPE Q+ E P PA + RP+VHSF K
Sbjct: 61 AEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVP---PAATERPRVHSFCKT 117
Query: 46 LTASDTSTHGGFSVLRKHATECLPPL-------------------DMNQSTPTQELVAKD 86
LTASDTSTHGGFSVLR+HA ECLPPL DM+Q PTQELVAKD
Sbjct: 118 LTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQDMSQHPPTQELVAKD 177
Query: 87 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ 146
LHG EWRF+HIFRGQPRRHLL +GWS FV++KRLVAGD F+FLRGENGEL VGVR RQ
Sbjct: 178 LHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQ 237
Query: 147 QSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKF 204
Q+++PSSVISS SMHLGVLATA HAV T TMF VYYKPRT S+F++ + Y E++
Sbjct: 238 QANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNH 297
Query: 205 AVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVS 263
++GMR+KM FEGE++ E+RF+GT+VGV D P W DSKWRSLKV+WDE AS+ RPDRVS
Sbjct: 298 SIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVS 357
Query: 264 PWEIEPFVASATPNLVQPVLA---KNKRPRLSMEVPPL 298
PW+IEP + +P+ V P+ A K RP + P L
Sbjct: 358 PWQIEP---ANSPSPVNPLPAPRTKRARPNVLASSPDL 392
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 146/282 (51%), Gaps = 35/282 (12%)
Query: 332 NHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHS-- 389
NH + S N+ F Q+ +L +P + Q+ N ++ AH
Sbjct: 519 NHNMYPGTWSLMPPNTGFGVNQQN---YLMTPDITLPQRSLNAKFGGNGAFTSLRAHGID 575
Query: 390 -------GHSTP--HPSKPNNDTLLEQ---VETGRKTETGTSCRLFGIELINHATSSAPS 437
GH P H ++ + Q ++ + G+SC LFGI L + A P
Sbjct: 576 QRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAK---PE 632
Query: 438 EKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFK-------EKKQEQVQVSP---KESQ 487
+ S+ +G + A + D SD +K K + +E+ Q P K Q
Sbjct: 633 LLISPPSVAFDGKLQQD---ALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQ 689
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEI 546
SKQ S+RS KV QG+A+GR++DLT YD LI EL++MFD G+L++ +K W +
Sbjct: 690 SKQQN-GSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMV 748
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
VYTD+EGDMMLVGDDPW+EFCNMV +IFI + ++V+KM+PG+
Sbjct: 749 VYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 790
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/297 (63%), Positives = 237/297 (79%), Gaps = 9/297 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 99 AKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVL 158
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 159 RRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 218
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T TMF V
Sbjct: 219 VAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTV 277
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH- 237
YYKPR S +FI+ ++Y+E+V + +++GM ++MRFEGE++PE+R++GT+VG+ED P
Sbjct: 278 YYKPRISPAEFIVPFDQYMESVKSNYSIGMGFEMRFEGEEAPEQRYTGTIVGIEDADPQR 337
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
W DSKWR LKV+WDE +++ RP+RVSPW+IEP +A P + P+ L++ KRPR +M
Sbjct: 338 WPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALA---PLALNPLPLSRPKRPRSNM 391
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 404 LLEQVETGRKTETGTS--CRLFGIELINHATSSAPSEKVPVSSLTTE-GHIISTISAAAD 460
L+E+ + + E G + C+LFGI L++ + + + +S+ GH+ + +
Sbjct: 609 LMEKPISVQHHEAGKTKDCKLFGIPLVSSSCVTPEPILLHQNSMNEPVGHMNHQL-GVLE 667
Query: 461 SDGKSDIAKE-----------FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAV 509
SD KS+ +K + K + Q K+ SK S+RS TKV QG+A+
Sbjct: 668 SDPKSEQSKSPTLANDSNCVSEQGKPSQTCQPHVKDVHSKPQS-GSSRSCTKVHKQGIAL 726
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCN 568
GR++DL+ Y+ LI EL+ +F+ G+L T K W I+YTDDEGD+MLVGDDPW EFC
Sbjct: 727 GRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTDDEGDIMLVGDDPWKEFCG 786
Query: 569 MVKRIFICSSQDVKKMSPGSKL 590
MV++IFI + ++V+KM PGS L
Sbjct: 787 MVRKIFIYTREEVQKMKPGSSL 808
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/609 (40%), Positives = 322/609 (52%), Gaps = 76/609 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ +TDEV+AQ+ L P+ ++ T P P + V SF K LTASDTSTHGGFSV R
Sbjct: 67 ADPQTDEVFAQMDLTPQYELSKETKDAPSPIQ--QSNVRSFCKTLTASDTSTHGGFSVPR 124
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A ECLP LD N P QELVAKDLHG +W F+HI+RG PRRHLLTTGWS FV+ KRLV
Sbjct: 125 RAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVFVSQKRLV 184
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGDT +FLRGENG+L VGVR ++QQ S+ SS ++HLGVLA ASHA + F V
Sbjct: 185 AGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATERLRFSVI 244
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
Y PRT S+F+I +KYL + +N VG R+KM+FE E+S ERR+SGT+V + D P W
Sbjct: 245 YNPRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSGTIVEISDVDPLKW 304
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
S WRS+KV+WDE AS R +RVSPWEIEP V +T L P + PR P
Sbjct: 305 PSSAWRSMKVEWDESAS-ERHERVSPWEIEPLVPIST--LPTPPVG----PRPKRRPPTF 357
Query: 299 DLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMS-RTQSDG 357
D +S W++ + ++ D S N S T S
Sbjct: 358 D----SSVSWASYMGTG---------------------AYQFRDPSCNKILPSWLTNSKS 392
Query: 358 EWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL-----LEQVETGR 412
LTSP V QL P S ++ P +N + +EQ +
Sbjct: 393 ANLTSPPVPARSQL--------------PITSLNNDPKVLHAHNLSFELWETVEQEQLNA 438
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSD-IAKEF 471
C+LFG L + + PVS S S DS+G + +
Sbjct: 439 SPALEQQCKLFGFNLADKVVPT------PVS---------SAPSLCEDSEGSGPWSSSDH 483
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+V + + Q + RS TKV G VGR +DL Y L L +
Sbjct: 484 TSSTSADTRVGMIVTGTYQPLVAPVRSGTKVYYSG-KVGRTIDLKKCESYAALRRMLASL 542
Query: 532 FDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
F ++GQL TK W++VYTD E D++LVGDDPW EFCN V+ + + S QD S G K
Sbjct: 543 FGLEGQLDDVTKGWQLVYTDHENDVLLVGDDPWEEFCNCVRSLKVLSPQDAAGQSVG-KY 601
Query: 591 PMFSIEGED 599
PM + + +D
Sbjct: 602 PMTNCDEDD 610
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/275 (65%), Positives = 219/275 (79%), Gaps = 10/275 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT-------PDPCPADSPRPKVHSFSKVLTASDTSTH 54
AEQ+TDEVYAQ+TLLPE Q+E + PD PA + R +VHSF K LTASDTSTH
Sbjct: 88 AEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTASDTSTH 147
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSVLR+HA ECLPPLDM+Q PTQELVAKDLHG EW F+HIFRGQPRRHLL +GWS F
Sbjct: 148 GGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQSGWSVF 207
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V++KRLVAGD F+FLRGENGEL VGVR RQ++++PSSVISS SMHLGVLATA H T
Sbjct: 208 VSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATAWHVANT 267
Query: 175 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
TMF VYYKPRTS +F++ + + E++ ++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 268 GTMFTVYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQRFTGTIVGIG 327
Query: 233 DFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWE 266
D P W DSKWRSLKV+WDE +S+ RP+RVSPW+
Sbjct: 328 DSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/275 (64%), Positives = 218/275 (79%), Gaps = 4/275 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+ LLPE Q+ E + P RP+VHSF K+LTASDTSTHGGFSVL
Sbjct: 59 AELDTDEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVL 118
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
++HA ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+L
Sbjct: 119 KRHADECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKL 178
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGE EL VGVR RQ S +PSS+ISS SMH+G+LATA HAV+T +MF V
Sbjct: 179 VAGDAFIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTV 238
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FII ++KY+E+V +A+GMR+KMRFE +D+PE+RFSGTV+GVE+ P
Sbjct: 239 YYKPRTSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKK 298
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W S WR LKV WDE + + RPDRVSPW++EP +A
Sbjct: 299 WPRSNWRCLKVHWDETSPVHRPDRVSPWKVEPALA 333
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 18/225 (8%)
Query: 392 STPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHI 451
S+PHPS+ L Q + +T + +LFG+ L ++ + P+ + S H
Sbjct: 497 SSPHPSRSKPKHLPFQ-QCNERTAKDDNYKLFGVSLFRNSKALEPA-TIHRHSADKPQHQ 554
Query: 452 ISTISAAADSDGKSDIAKEFKEKKQEQVQ----------VSPKESQSKQSCLTSNRSRTK 501
I+ S G ++ K K + + + K+ Q K ++ R K
Sbjct: 555 INVASDHLQLLGSDRYLEQLKHPKHARCEEQENIFQASSLYSKDVQGKPEGGSARRC-VK 613
Query: 502 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 560
V QG AVGR+LDL+ GY+ L EL+++F+ G+L K W IV+TDDE DMMLVGD
Sbjct: 614 VHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDMMLVGD 673
Query: 561 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 605
DPW EFC+MV+RIFI + +++ +M P S ++E E S+D
Sbjct: 674 DPWQEFCSMVRRIFIYTKEEINRMEPRS----LNLEAEGNSRSTD 714
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/249 (72%), Positives = 210/249 (84%), Gaps = 3/249 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEVYAQITLLPE +QNE T+PDP + R VHSF K LTASDTSTHGGFSVLR
Sbjct: 87 AESDTDEVYAQITLLPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTSTHGGFSVLR 146
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA +CLPPLDM+Q P QELVA DLHG +W F+HIFRGQPRRHLLTTGWS FV+SK+LV
Sbjct: 147 RHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVSSKKLV 206
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGENGEL VGVR L RQ ++MPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 207 AGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGTLFSVF 266
Query: 182 YKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED-FSPHW 238
YKPRTS+ F++SLNKYLEA N+K +VGMR+KMRFEGE+ PER FSGT+VG+ D SP W
Sbjct: 267 YKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGDNASPGW 326
Query: 239 KDSKWRSLK 247
+S+WRSLK
Sbjct: 327 ANSEWRSLK 335
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 247/662 (37%), Positives = 358/662 (54%), Gaps = 79/662 (11%)
Query: 1 MAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVLTAS 49
+A +E DEVY Q+ LLP+ + P+ AD SP + H F K LTAS
Sbjct: 116 LANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLTAS 175
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RGQPRRHLLTT
Sbjct: 176 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHLLTT 235
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+I +QS L++ +
Sbjct: 236 GWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLSSVA 295
Query: 170 HAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF-SG 226
+A++ ++MF V+Y PR S F++ KY +++ N +G R+KM+FE ++SPERR SG
Sbjct: 296 NAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRCSSG 355
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
V G+ D P+ W SKWR L V+WDE DRVSPWEI+P + N+ K
Sbjct: 356 IVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSRRLK 415
Query: 286 NKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL--------SVTAEDKRI 330
R L +E P + + S S+++ Q T +VT + +
Sbjct: 416 KLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYYGCDTVTKQKEFD 475
Query: 331 DNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTSPRVKFSQQLFQEAIDDN 379
N + +H++ +SN S+ +R Q E PRV +Q+++
Sbjct: 476 INSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQAQEIYPLRSLTG 531
Query: 380 K---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG--------RKTETGTSCRL-- 422
K N+++W +++ ++ + +K N +L +V K G+S
Sbjct: 532 KVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSK 591
Query: 423 ---FGIELINHATSS----APSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKE--F 471
F + ++ T S A +V +SS + E + + ISAA D I+ + F
Sbjct: 592 PTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSLDANIRISNDENF 651
Query: 472 KEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAVGRALDLTTLVGYDHLID 526
KE K +S + Q+ S RS TKV QG VGRA+DL+ L Y+ L+
Sbjct: 652 KEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVS 711
Query: 527 ELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+MV +I I + ++V+KM+
Sbjct: 712 ELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKMT 771
Query: 586 PG 587
G
Sbjct: 772 IG 773
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 188/301 (62%), Positives = 227/301 (75%), Gaps = 7/301 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE +TDEV+AQITLLP+ Q+E RP+VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPDTDEVFAQITLLPQSEQDENLVEKKALPAPTRPRVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLPPLDM+ P QELVAKDL G EWRF+HIFRGQPRRHLL +GWS FV++K+LV
Sbjct: 144 RHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLV 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD F+FLRGE GEL VGVR RQ ++PSS +SS SMH+G+LATA HAV+T TMF VY
Sbjct: 204 AGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGILATAWHAVSTGTMFTVY 263
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
YKPRTS +FII ++KY+E+V N F +GMR+KMRFE E++PE+RF GTV+GVE P W
Sbjct: 264 YKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPEQRFLGTVIGVEHADPKRW 323
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
S+WR LKV+WDE +S+ RPDRVSPWE+EP +A P P + KR R +M +P
Sbjct: 324 PTSRWRCLKVRWDETSSLHRPDRVSPWEVEPALAPLDP---LPT-CRLKRSRSNMPMPSA 379
Query: 299 D 299
D
Sbjct: 380 D 380
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII----STISAAADS--DGKSD 466
K++ +C+LFGI LI S VP+ + T + + + + A+D D SD
Sbjct: 584 KSKEDGNCKLFGISLI--------SSPVPMENATVDNNFMHRPQGLFNLASDKLQDFGSD 635
Query: 467 IA-KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSR-TKVQMQGVAVGRALDLTTL 518
++ ++ K+ K + +E S + L + +R KV QG+AVGR +DLT
Sbjct: 636 LSLQQLKKPKFFDSTIRCEEEKLFMASHFIEGKLQNGSTRCVKVHKQGIAVGRYVDLTKF 695
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
GY+ LI EL+ +F+ G+L T K W I +TDDEGDMMLVGDDPW EFC+MV+RIF+ +
Sbjct: 696 NGYNELIAELDRIFEFSGELITSNKNWLIAFTDDEGDMMLVGDDPWEEFCSMVRRIFVYT 755
Query: 578 SQDVKKMSPGSKLP 591
+++ +M+ S P
Sbjct: 756 REEINRMNQRSLNP 769
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 247/674 (36%), Positives = 358/674 (53%), Gaps = 91/674 (13%)
Query: 1 MAEQETDEVYAQITLLPEPSQN----EPTTPDPCPAD------SP-RPKVHSFSKVLTAS 49
+A +E DEVY Q+ LLP+ + P+ AD SP + H F K LTAS
Sbjct: 116 LANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLTAS 175
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG--------- 100
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RG
Sbjct: 176 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETELLCW 235
Query: 101 ---QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 157
QPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S+I +
Sbjct: 236 LDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGN 295
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFE 215
QS L++ ++A++ ++MF V+Y PR S F++ KY +++ N +G R+KM+FE
Sbjct: 296 QSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFE 355
Query: 216 GEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
++SPERR SG V G+ D P+ W SKWR L V+WDE DRVSPWEI+P +
Sbjct: 356 MDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSL 415
Query: 274 ATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPW-------SARLAQSHNLTQL----- 321
N+ K R L +E P + + S S+++ Q T
Sbjct: 416 PPLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYY 475
Query: 322 ---SVTAEDKRIDNHVAWHHKHSDFSSN------SNFMSRTQSDG-----EWLTSPRVKF 367
+VT + + N + +H++ +SN S+ +R Q E PRV
Sbjct: 476 GCDTVTKQKEFDINSL----RHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQ 531
Query: 368 SQQLFQEAIDDNK---NISAWP----AHSGHSTPHPSKPNNDTLLEQVETG--------R 412
+Q+++ K N+++W +++ ++ + +K N +L +V
Sbjct: 532 AQEIYPLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIH 591
Query: 413 KTETGTSCRL-----FGIELINHATSS----APSEKVPVSS--LTTEGHIISTISAAADS 461
K G+S F + ++ T S A +V +SS + E + + ISAA
Sbjct: 592 KVGQGSSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSL 651
Query: 462 DGKSDIAKE--FKEK----KQEQVQVSPKESQSKQSCLTS-NRSRTKVQMQGVAVGRALD 514
D I+ + FKE K +S + Q+ S RS TKV QG VGRA+D
Sbjct: 652 DANIRISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAID 711
Query: 515 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 573
L+ L Y+ L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC+MV +I
Sbjct: 712 LSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKI 771
Query: 574 FICSSQDVKKMSPG 587
I + ++V+KM+ G
Sbjct: 772 HIYTQEEVEKMTIG 785
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 212/582 (36%), Positives = 305/582 (52%), Gaps = 146/582 (25%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E T+++YA++ LLP+ S E P ++ ++ F+KVL+ASDT GGF + +
Sbjct: 77 VENNTNDIYAEVALLPDTSDVEIPIP---KNENNIQNINYFTKVLSASDTCKTGGFVLYK 133
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q TP+QE++AKD+HG++W FKH
Sbjct: 134 RHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------------------ 169
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
LRGENGE VG+ A Q+ ++P+S IS QSMH GV+ATA + + + MFVV+
Sbjct: 170 -------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKNKCMFVVF 222
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR+SQF+++ +K+++ VNNKF++G ++ M+FEG+D E R++GT+VGV DFS HWKDS
Sbjct: 223 YKPRSSQFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGTIVGVGDFSTHWKDS 282
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
+WRSLKVQWD A+I RPD+V
Sbjct: 283 EWRSLKVQWDGTATIPRPDKV--------------------------------------- 303
Query: 302 SAASAPWSAR-LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWL 360
+PW L QS N+++ ++ID + S S T S G+
Sbjct: 304 ----SPWEIEMLTQSSNISKSDYLKNKRQIDV----------YEFGSKMWSPTLSQGQES 349
Query: 361 TSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSC 420
P ++ S + ST + N+ + + ++ T TSC
Sbjct: 350 GQPSIQSSMRY------------------SFSTMY-----NEQMAQAMKETSTTTATTSC 386
Query: 421 RLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 480
RLFG++L+N AT+ P E + DS+ K I+K F+++K + VQ
Sbjct: 387 RLFGVDLVNPATTKDPVEPI-------------------DSNKKLKISKIFEDEKIDHVQ 427
Query: 481 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 540
RS TKV M+GV + R +DLT GY LIDELE +FDIKG+LH
Sbjct: 428 A---------------RSHTKVHMEGV-IERTVDLTIFDGYSQLIDELERLFDIKGELHM 471
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
KW++ + D+GDMM++GDDPW +FC M K IFICS + VK
Sbjct: 472 HNKWKMFFIYDDGDMMILGDDPWTKFCYMAKEIFICSKKGVK 513
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/259 (69%), Positives = 208/259 (80%), Gaps = 5/259 (1%)
Query: 35 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 94
PR SF K LTASDTSTHGGFSVLR+HA ECLPPLDMNQ P QELVAKDLHG W F
Sbjct: 11 PRSGACSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHF 70
Query: 95 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 154
+HIFRGQPRRHLLTTGWS FV+SKRL+AGD F+FLRG+NGEL VGVR RQQ+++ SSV
Sbjct: 71 RHIFRGQPRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSV 130
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKM 212
ISS SMHLGV+ATASHAV+T TMF VYYKPRT S FII KY+EA+NN F+VGMR+KM
Sbjct: 131 ISSHSMHLGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMRFKM 190
Query: 213 RFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
RFEGE++PE+RF GT++G D P W SKWRSLKVQWDE + + RP+RVSPWEIE +
Sbjct: 191 RFEGEEAPEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIE-LI 249
Query: 272 ASATPNLVQPVLAKNKRPR 290
A+A PV ++NKRPR
Sbjct: 250 ATAAALSPLPV-SRNKRPR 267
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 118/214 (55%), Gaps = 23/214 (10%)
Query: 409 ETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIST------ISAAADSD 462
E G + +C+LFG +L++++ S + V + S+T E + +S A+ D
Sbjct: 538 EMGPTAPSANNCKLFGFQLVDNSVVSESTTPVIIGSVTGEDMQAAVHAPRENLSQPAELD 597
Query: 463 GKSDIAKEFKE-------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 515
+S+ +K K ++++ Q S KE+Q + S RS TKVQ QG A GRA+DL
Sbjct: 598 QQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFRAES-NSFRSHTKVQKQGSAFGRAVDL 656
Query: 516 TTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWH--------EF 566
GY I ELE+MF+I+G+L R W +VYTD+EGDMMLVGD PW EF
Sbjct: 657 MKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDHPWQEFLHPINREF 716
Query: 567 CNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI 600
C + +I+I + ++V+KM+P L IEG +
Sbjct: 717 CRIAHKIYIYTREEVEKMTPWQTLDGKKIEGRSV 750
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 351 bits (900), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 179/298 (60%), Positives = 221/298 (74%), Gaps = 14/298 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AEQ+TDEVYAQ+ L+PEP QNE TTP P + RP S + T
Sbjct: 81 AEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQA-RPPGEGPSARRSPRLTPARTAA 139
Query: 58 SVLRKHA--TECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
S+ + LP DM QS PTQELVAKDLH +WRF+HIFRGQPRRHLL +GWS FV
Sbjct: 140 SLYSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFV 199
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
+SKRLVAGD F+FLRGENGEL VGVR RQ S++PSSVISSQSMHLGVLATA HA+ T+
Sbjct: 200 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTK 259
Query: 176 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
+MF VYYKPRT S+FII ++Y+E+V N ++VGMR++MRFEGE++PE+RF+GT++G E+
Sbjct: 260 SMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSEN 319
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P W +S WRSLKV+WDEP++I RPDRVSPW+IEP AS+ P V P+ L++ KRPR
Sbjct: 320 LDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLPLSRVKRPR 373
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
EK +Q Q S K+ QSK + + S RS TKV QGVA+GR++DL+ YD L EL++MF
Sbjct: 666 EKSGQQAQQSSKDVQSK-TQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMF 724
Query: 533 DIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ G+L + K W+IVYTD+EGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S P
Sbjct: 725 EFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAP 784
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/217 (82%), Positives = 196/217 (90%), Gaps = 1/217 (0%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE++TDEVYAQITL+P ++ +EP +PDP P + RPKVHSFSKVLTASDTSTHGGFSVL
Sbjct: 75 AEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVL 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RKHATECLPPLDM Q TPTQELVA+D+HGY+W+FKHIFRGQPRRHLLTTGWSTFVTSKRL
Sbjct: 135 RKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFVTSKRL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGDTFVFLRGENGEL VGVR QQSSMPSSVISS SMHLGVLATA HA T+TMF+V
Sbjct: 195 VAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLATARHATQTKTMFIV 254
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
YYKPRTSQFIISLNKYLEA++NKF+VGMR+KMR GE
Sbjct: 255 YYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRLWGE 291
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/302 (59%), Positives = 225/302 (74%), Gaps = 6/302 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+QE DEVYAQ+TL+PE ++E + PA S H F K LTASDTSTHGGFSV R
Sbjct: 128 ADQEMDEVYAQLTLVPESEKSEKCMEEQVPA-STSCTPHMFCKTLTASDTSTHGGFSVPR 186
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A +C PPLD Q P+QELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV++KRLV
Sbjct: 187 RAAEDCFPPLDYTQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLV 246
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
+GD +FLRGENGEL +G+R +RQQS SSV+SSQSMHLGVL A+HAVAT++MF ++
Sbjct: 247 SGDAVLFLRGENGELRLGIRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIF 306
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
+ PRTS +F+I +KY+++ N+ A+GMR+KMRFE ED+ ERR++GT+ G+ D P W
Sbjct: 307 FNPRTSPAEFVIPYHKYVKSFNHPLAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARW 366
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
SKWRSLKV+WDE A+ R +RVSPWEIEPF++S N+ P + KR R S +
Sbjct: 367 PGSKWRSLKVEWDEHAANERQERVSPWEIEPFISSTGLNI--PAGPRIKRLRTSFQPTST 424
Query: 299 DL 300
DL
Sbjct: 425 DL 426
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 407 QVETGRKTETGTSCRLFGIELINHATS-SAPSEKVPVSSLTTEGHIIST------ISAAA 459
QV+ G + +C+LFG+ LI + S ++ S+ ++G ++ S++
Sbjct: 682 QVKDGGGVKGDRNCKLFGVSLIEESDCIDDGSSRMHKDSVISDGLHVALGKGPFHFSSSQ 741
Query: 460 DSDGKSDIAKEFKE--------KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGR 511
D D + K+ + + EQ S ++K S S RS TKV QG AVGR
Sbjct: 742 DHD---QLEKDLDDHCGHLVPLRDTEQEITSQMVPKAKSSVQASGRSCTKVHKQGNAVGR 798
Query: 512 ALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMV 570
A+DL+ GYD LI ELE +F+++ L K W +VYTD+EGD+MLVGDDPW EFC++V
Sbjct: 799 AVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVYTDNEGDIMLVGDDPWQEFCSIV 858
Query: 571 KRIFICSSQDVKKMSPG 587
+I I + ++V+KM+PG
Sbjct: 859 CKIMIYTREEVEKMTPG 875
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/295 (56%), Positives = 212/295 (71%), Gaps = 17/295 (5%)
Query: 2 AEQETDEVYAQITLLPE------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
E +DE YA+ITL+P+ P+QNE + RP V+SF+KVLTASD S +G
Sbjct: 89 VENNSDETYAKITLMPDTTQVVIPTQNE---------NQFRPLVNSFTKVLTASDISANG 139
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
FSV +KHA ECLPPLDM+Q P QEL+A DLHG +W F+H +RG P+RHLLTTGW+ F
Sbjct: 140 VFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFT 199
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
TSK+LV GD VF+RGE GEL VG+R QQ ++PSS++S M GV+A+A HA Q
Sbjct: 200 TSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQ 259
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
MF+V YKPR+SQFI+S +K+L+AVNNKF VG R+ MRFEG+D ERR+ GT++GV +FS
Sbjct: 260 CMFIVVYKPRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSNFS 319
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
PHWK S WRSL+VQWDE AS RP++VSPWEIE + + N+ + KNKR R
Sbjct: 320 PHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPAL--NVPRSSFLKNKRLR 372
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 57/221 (25%)
Query: 372 FQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHA 431
F++A++ ++ + ++P P P + N+ ++ Q+E T+ GT+ RLFG+ L
Sbjct: 377 FEDAMNPSRLLMSYPVQ-----PMPKRNYNNQMVTQIEENITTKAGTNFRLFGVSL---- 427
Query: 432 TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAK--EFKEKKQEQVQVSPKESQSK 489
++ P K P+ + SDI+K E K+ Q Q SP + QSK
Sbjct: 428 -ATPPVIKDPIEQI------------------GSDISKLTEGKKFGQSQTLRSPTKIQSK 468
Query: 490 Q-----SC---------------------LTS-NRSRTKVQMQGVAVGRALDLTTLVGYD 522
Q +C LTS N +VQMQGV +GRA+DL+ L GYD
Sbjct: 469 QFSSTRTCTKVSIRSIYSYSLYMKLFLIILTSHNFDMEQVQMQGVTIGRAVDLSVLNGYD 528
Query: 523 HLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
LI ELE++FD+KGQL TR +W+I++T + D MLVGDDPW
Sbjct: 529 QLILELEKLFDLKGQLQTRNQWKIIFTGSDEDEMLVGDDPW 569
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 344 bits (882), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 173/309 (55%), Positives = 221/309 (71%), Gaps = 15/309 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-------RPKVHSFSKVLTASDTSTH 54
A+QETDEVYAQ+TL+PEP EP D + + H F K LTASDTSTH
Sbjct: 99 ADQETDEVYAQVTLVPEP---EPAEKDLEEEEEDEEAGVLNKSTPHMFCKTLTASDTSTH 155
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R+ A +C PPLD NQ P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 156 GGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSVF 215
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V K L++GD +FLRGENGEL +G+R ARQQS +PSSV+SSQSMHLGVLA+A++AVAT
Sbjct: 216 VNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSMHLGVLASAANAVAT 275
Query: 175 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
++MF ++Y PR S +F+I +KY+++ N ++GMR+KMRFE ED+ ERR++G + G+
Sbjct: 276 KSMFHIFYNPRASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETEDTAERRYTGIITGIG 335
Query: 233 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ A N+ + KR +
Sbjct: 336 DVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLNVSSGT--RIKRLKT 393
Query: 292 SMEVPPLDL 300
S+ P+D
Sbjct: 394 SLPSTPVDF 402
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 419 SCRLFGIELINHATS--SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
SC+LFG LI + A S ++P + +T ++ S ++ + K+
Sbjct: 742 SCKLFGFSLIEESACIDDAISSRIPRAGVTMNFLHMAHDQEPVQSSILRNLDQPLKDLHD 801
Query: 477 EQVQVSPKESQSKQSCLTS--------NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
+ E Q ++ R TKV QG VGRA+DL+ L GYD LI EL
Sbjct: 802 HSEGLESSEHQITFQTISKVPTSVPALGRKCTKVHKQGNIVGRAVDLSKLDGYDELISEL 861
Query: 529 EEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
E +F+++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + ++V+KM+PG
Sbjct: 862 ERLFNMEGLLNDPEKGWQVVYTDNENDIMLVGDDPWQEFCNIVCKILIYTHEEVEKMAPG 921
Query: 588 SKLPMFS 594
MFS
Sbjct: 922 ----MFS 924
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 218/296 (73%), Gaps = 14/296 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+TLLPEP Q+E DP PR VHSF K LTASDTSTHGGFSVL
Sbjct: 117 AEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPPRFHVHSFCKTLTASDTSTHGGFSVL 176
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPL ST + + + GQPRRHLL +GWS FV+SKRL
Sbjct: 177 RRHADECLPPLVSINSTEFVRCLIDIIM--------LIPGQPRRHLLQSGWSVFVSSKRL 228
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGENGEL VGVR RQQ ++PSSVISS SMHLGVLATA HA++T T+F V
Sbjct: 229 VAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTLFTV 288
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
YYKPRTS +FI+ ++Y+E+V N + +GMR+KMRFEGE++PE+RF+GT+VG+ED S
Sbjct: 289 YYKPRTSPAEFIVPFDRYMESVKNNYCIGMRFKMRFEGEEAPEQRFTGTIVGIEDADSKR 348
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W++SKWRSLKV+WDE ++I RPDRVSPW +EP A A P L + + KRPR +M
Sbjct: 349 WRESKWRSLKVRWDETSTIPRPDRVSPWSVEP--ALAPPALNPLPVPRPKRPRSNM 402
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 18/214 (8%)
Query: 405 LEQVETGRKTETGTSCRLFGIELINHATSSAP--SEKVPVSSLTTEGHIISTISAAADSD 462
L++ + G+ T+ +C+LFGI L ++ + P S + V+ TT H S A +SD
Sbjct: 621 LQEHDIGKSTDG--NCKLFGIPLFSNPVAPEPATSHRNMVNEPTT-AHPQSHQPRALESD 677
Query: 463 GKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 515
+S+ + K EK+ + + ++ Q K S RS TKV QG+A+GR++DL
Sbjct: 678 QRSEQPRVSKMADDNEHEKQFQSGHLHTRDIQGKTQT-GSTRSCTKVHKQGIALGRSVDL 736
Query: 516 TTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIF 574
YD LI EL+ +F+ G+L + K W IVYTDDEGDMMLVGDDPW EF MV++IF
Sbjct: 737 AKFNNYDELIAELDRLFEFGGELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIF 796
Query: 575 ICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSAE 608
I + ++V+KM+PG+ + +G++ LL D +
Sbjct: 797 IYTREEVQKMNPGT----LNSKGDEHLLDVDGVD 826
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/296 (61%), Positives = 226/296 (76%), Gaps = 7/296 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEV+AQ+ LLP Q+ + + P RP+VHSF K+LTASDTSTHGGFSVL
Sbjct: 70 AELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTSTHGGFSVL 129
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM+ P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV++K+L
Sbjct: 130 RRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKL 189
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLRGE EL VGVR Q S++PSSV+SS SMH+G+LAT HAV+T +MF V
Sbjct: 190 VAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAVSTGSMFTV 249
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YYKPRTS +FII ++KY E+V +A+GMR+KM+FE E++PE+RFSGTV+GVE+ P
Sbjct: 250 YYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQRFSGTVIGVEEADPKK 309
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSM 293
W SKWR LKV+WDE + + RPDRVSPW+IE +A P+L ++KR R +M
Sbjct: 310 WPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALA---PSLDPVPGCQSKRHRSNM 362
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 157/287 (54%), Positives = 218/287 (75%), Gaps = 5/287 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E T+E+YA+++LLP+ S E P ++ ++ F+KVL+ASDTST+GGF + +
Sbjct: 77 VEPSTNEIYAEVSLLPDTSDVEIPIPK---NENNIQNINYFTKVLSASDTSTNGGFVLYK 133
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q TP+QE++AKD+HG+EW FKH RG P+RHL T+GW+ F K+LV
Sbjct: 134 RHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSGWNEFAKGKKLV 193
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+FVFLRGENGE VG+ A QQ ++P+S+IS +SMH V+ATA +A+ + MFVV+
Sbjct: 194 AGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATALNAIENKCMFVVF 253
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKPR+SQFI++ +K+++ VNNKF++G ++ M+FEG+D E R++GTVVGV DFS HWKDS
Sbjct: 254 YKPRSSQFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIRYNGTVVGVRDFSTHWKDS 313
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
+WRSL+VQWDE A+I RPD+VSPWEIE S+ N+ + K+KR
Sbjct: 314 EWRSLEVQWDEAATIPRPDKVSPWEIELLTHSS--NIFKSDALKHKR 358
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 35/182 (19%)
Query: 401 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD 460
N+ +++ ++ T TSCRLFG++L+ A + P E +
Sbjct: 376 NEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDPVEPIV------------------- 416
Query: 461 SDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
S+ K I+K F+++K + VQ +SRTKV M+GV + R +DLT G
Sbjct: 417 SNKKCKISKIFEDEKVDHVQA---------------KSRTKVHMEGV-IERTVDLTIFDG 460
Query: 521 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
Y+ LIDELE +FDIKG+LH KW++ + ++GDMM++GDDPW +FCNM K IFICS +D
Sbjct: 461 YNQLIDELERLFDIKGELHMHNKWKMFFIYNDGDMMILGDDPWPKFCNMAKEIFICSKED 520
Query: 581 VK 582
VK
Sbjct: 521 VK 522
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 212/297 (71%), Gaps = 6/297 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E TDEVYA+++LLP + E T P+ D+ + F+KVLTASD HG F + +
Sbjct: 88 VETNTDEVYAKVSLLPCSPEVEITFPN----DNNEQNIKYFTKVLTASDIGPHGDFILFK 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
K A ECLPPLDM+Q P+QE+VAKDLH + W+FKH FRG P+RHL T+GW FV K L
Sbjct: 144 KDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTPKRHLFTSGWKEFVKGKSLA 203
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
GD+FVFLRGENGE VG+R + QQS M SSVIS +SMH G +A+AS+A+ T+ MF V+
Sbjct: 204 VGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHHGFIASASNAIHTKCMFDVF 263
Query: 182 YKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDS 241
YKP++S+FI++ +K+L+AVN KF R+ M+FEG D E +SGT+V +EDFS +WK S
Sbjct: 264 YKPKSSKFIVNCDKFLDAVNMKFNTSSRFTMKFEGHDFNEIIYSGTIVKMEDFSIYWKGS 323
Query: 242 KWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+WR+L+VQWDE A+I RP++VS WEIEP + S+ N+++ V+ NKR R E P+
Sbjct: 324 EWRNLQVQWDEAATIPRPNKVSLWEIEPLIPSS--NILKSVIQNNKRQREINEFGPI 378
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 22/185 (11%)
Query: 394 PHPSKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHII 452
P SKP+ ND +++ + T +S RLFG++L A+S A P+ S
Sbjct: 377 PIISKPDYNDQMVQSTKENSTTNASSSFRLFGVDLT--ASSKARDVLEPLESYQ------ 428
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 512
K+ ++ F+E+ +Q Q ++ ++ L+ S TKV M+GV R
Sbjct: 429 -----------KNKTSEIFEEENLDQTQAVTSLTEIQRKELSFTTSSTKVHMEGVT--RT 475
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 572
+DLT GY+H+I ELE++F+I+G+LH ++W++ + D EGDMMLVGDDPW +FCN+VK
Sbjct: 476 VDLTVFDGYNHMIVELEKLFNIEGKLHMHSQWKLTFKDHEGDMMLVGDDPWPKFCNIVKE 535
Query: 573 IFICS 577
I I S
Sbjct: 536 IVISS 540
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/368 (51%), Positives = 243/368 (66%), Gaps = 24/368 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSFSKVLTASDTSTHGG 56
A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F K LT+SDTSTHGG
Sbjct: 98 ADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMFCKNLTSSDTSTHGG 153
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 154 FSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVS 213
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGVLATASHAVATQ 175
K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMHLGVLA A+HAV+T+
Sbjct: 214 QKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVSTK 273
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF ++Y PR S +F++ +KY++A + +VGMR+KMRFE E+S ERR+ GT+ GV D
Sbjct: 274 TMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYMGTITGVGD 333
Query: 234 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
S W +SKWR L+V WDE + R +RVSPWEIEPF+A PN+ P + + +
Sbjct: 334 IDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---PNVANPPTTQRVK-KFR 389
Query: 293 MEVPPLDLPSAASAPWSAR------LAQSHNLTQLSVTAEDKRIDNHVA-WHHKHSDFSS 345
P + P+ + SA+ L SH L S E R + A W + D
Sbjct: 390 PNTPANEFPTGKNNSDSAQAMHMRALQGSHALGMPSKEEEGLRGSSPFAVWPYNRDDLKG 449
Query: 346 NSNFMSRT 353
S RT
Sbjct: 450 ESWIQLRT 457
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 93/174 (53%), Gaps = 19/174 (10%)
Query: 419 SCRLFGIELINH---ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
SC++FG LI A S P E S E + A S G + +
Sbjct: 597 SCKIFGFSLIEKSPPAASRNPEEARLNPSRGGE-QMTRCSGRAGPSAGNGSL-------E 648
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
E+ P + S ++C TKV +QG AVGRA+DL+ Y L+ EL+++F +
Sbjct: 649 HERCASRPASAWSLRTC-------TKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLD 701
Query: 536 GQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
L + W++VYTD+EGDM+LVGDDPW EFCNMV+ I I S +V+K++ G+
Sbjct: 702 NALDDPDSGWQVVYTDNEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGA 755
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 175/429 (40%), Positives = 251/429 (58%), Gaps = 57/429 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG + +
Sbjct: 87 VDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPK 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKR 119
++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F T+KR
Sbjct: 144 QYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKR 203
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T+ MF
Sbjct: 204 LIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFN 263
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
V YKP +SQF+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D SPHWK
Sbjct: 264 VVYKPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWK 323
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
DS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 324 DSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH----------- 370
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
W + ++ SN + +
Sbjct: 371 ------------------------------------WLQLNEIGATLSNLWTCQEIGQRS 394
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
+ SP + + + AI+D+K +S HS + P+ + N+D +++ + TE T
Sbjct: 395 MNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATT 452
Query: 419 SCRLFGIEL 427
SC LFG++L
Sbjct: 453 SCLLFGVDL 461
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/302 (53%), Positives = 217/302 (71%), Gaps = 14/302 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE TD+VYAQI LLPEP Q + +PDP + R VHSF ++LT SD S+H F V +
Sbjct: 110 AEPITDQVYAQIMLLPEPEQIDVISPDPPLPEPERCVVHSFRRILTVSDISSHDHFFVDQ 169
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA CLPPLDM+Q P QELVA DL+G +W F+HIF+G+ +HLLTTGWS FV+SK+LV
Sbjct: 170 KHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTGWSAFVSSKKLV 229
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
+GD F+FLRGENGEL VGVR L +++++ SS S+Q H +LA AS+A++T ++F V+
Sbjct: 230 SGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASYAISTGSLFCVF 288
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
Y+PRT S+FI+S+NKY+EA N+KF +GMR+ MRFEGE+ P R +GT+V +E SP W
Sbjct: 289 YEPRTSRSEFIVSVNKYIEARNHKFCIGMRFLMRFEGEEVPIERINGTIVSMET-SPRWP 347
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS----MEV 295
DS+WR KV+WDEP+ I P+RVSPWE+E +S+ P + + KR R S ME+
Sbjct: 348 DSEWRCFKVRWDEPSLIVHPERVSPWEMENISSSSQP------VPRTKRSRSSSPGAMEI 401
Query: 296 PP 297
P
Sbjct: 402 SP 403
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 428 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQ 487
+ + T SAPS E +S +SD S+ A + +K + ++
Sbjct: 475 VVYVTESAPSVN---KDFGMEEDGCPVLSLENESDQHSETANINQSEKLSVISCDTEKLC 531
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT-KWEI 546
SK+ + +V+MQG+A+GR++DLT ++ LI ELE MF+I+G+L T KW I
Sbjct: 532 SKKQITSC----AEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLI 587
Query: 547 VYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
VYTD + +M LVGD W CNMVK+I I
Sbjct: 588 VYTDADSEMKLVGDYQWEVVCNMVKKILI 616
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/296 (58%), Positives = 219/296 (73%), Gaps = 16/296 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT--TPD---PCPADSPRPKVHSFSKVLTASDTSTHGG 56
A++ETDEV+AQ+TL+PE Q + + T D PCP + K+ F K LT+SDTSTHGG
Sbjct: 98 ADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCP----KRKLSMFCKNLTSSDTSTHGG 153
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A ECLPPLD QS P QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 154 FSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVS 213
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGVLATASHAVATQ 175
K+LVAGD +FLRG+NGEL +GVR RQQ+S+ SS++SS SMHLGVLA A+HAV+T+
Sbjct: 214 QKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAAAHAVSTK 273
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF ++Y PR S +F++ +KY++A + +VGMR+KMRFE E+S ERR+ GT+ GV D
Sbjct: 274 TMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYMGTITGVGD 333
Query: 234 F-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
S W +SKWR L+V WDE + R +RVSPWEIEPF+A PN+ P + R
Sbjct: 334 IDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIA---PNVANPPTTQRAR 386
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/300 (55%), Positives = 214/300 (71%), Gaps = 9/300 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A +ETDEVYAQ+TL+PE Q + + P S + K+ FSK LT+SDTSTHGGFSV R
Sbjct: 138 AYRETDEVYAQMTLVPENEQLDQSLELDEPTASSKAKLSMFSKNLTSSDTSTHGGFSVPR 197
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+ K+LV
Sbjct: 198 RAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSQKKLV 257
Query: 122 AGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A+HAV+T+TMF V
Sbjct: 258 AGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHAVSTKTMFTV 317
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVGVEDFSP 236
+Y PR S +F++ +KY+++ +GMR+KMRFE EDS ER R+ GT+ G+ D P
Sbjct: 318 FYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSVRYMGTITGIGDIDP 377
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV K RP + ++
Sbjct: 378 ARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVSTKRFRPTMLTDI 434
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 555
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 657 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQAVYVDNEGDM 714
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+LVGDDPW EFC+ V+ I I S +++K++
Sbjct: 715 LLVGDDPWEEFCSTVRCIRILSPAEIQKLT 744
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 224/305 (73%), Gaps = 12/305 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHGGFS 58
A+QE DEVYAQ+TL+P+ +NE + P+ +P H F K LTASDTSTHGGFS
Sbjct: 136 ADQEMDEVYAQLTLVPDSEKNEKCMEEQLSVPPSSTP----HMFCKTLTASDTSTHGGFS 191
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ K
Sbjct: 192 VPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYK 251
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD +FLR ENGEL +G+R ++QQSS+PSSV+SS +H GVLA +HAVAT++MF
Sbjct: 252 RLVAGDAVLFLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMF 311
Query: 179 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
+YY PRTS +F+I +KY+++ N+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P
Sbjct: 312 HIYYNPRTSPTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDP 371
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
W +S+WRS KV WDE A+ R DRVSPWEIEPF ++ N + + KR R S
Sbjct: 372 MRWPNSRWRSFKVGWDEHAAQERQDRVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPS 429
Query: 296 PPLDL 300
P DL
Sbjct: 430 APTDL 434
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 110/199 (55%), Gaps = 25/199 (12%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADS-DGKSDIA--- 468
K + +C+LFG L+ + P++S TE + S S DG A
Sbjct: 695 KVKGERNCKLFGFSLLKESVCV----DDPINSAMTEDGVSSEGGLHVPSGDGPLQTAHSK 750
Query: 469 ------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQMQGVAVGRALDLT 516
KE ++ + E ++ + S S RS TKV QG AVGRA+DL+
Sbjct: 751 DSDQSEKELHNHYGHEITLRSVEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLS 810
Query: 517 TLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW EFCN+V +I I
Sbjct: 811 KLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILI 870
Query: 576 CSSQDVKKMSPGSKLPMFS 594
C+ ++V+KM+PG MFS
Sbjct: 871 CTQEEVQKMTPG----MFS 885
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/307 (53%), Positives = 213/307 (69%), Gaps = 16/307 (5%)
Query: 2 AEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 52
A +ETDEVYAQ+TL+PE Q + + P S + K+ F K LT+SDTS
Sbjct: 138 AYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKNLTSSDTS 197
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A EC P LD Q+ P QE++AKDLHG EW+F+HI+RGQPRRHLLTTGWS
Sbjct: 198 THGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHLLTTGWS 257
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHA 171
FV+ K+LVAGDT +F+RG+NGEL +G+R R Q S SS++SS SM +GVLA A+HA
Sbjct: 258 VFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAAHA 317
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
V+T+TMF V+Y PR S +F++ +KY+++ +GMR+KMRFE EDS ERR+ GT+
Sbjct: 318 VSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERRYMGTIT 377
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR LKV WDE A+ R +RVSPWEIEPF+A PN+ PV K R
Sbjct: 378 GIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIA---PNVTPPVSTKRFR 434
Query: 289 PRLSMEV 295
P + ++
Sbjct: 435 PTMLTDI 441
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDM 555
+R+ TKV G AVGRALDL+ GY L++EL+ +F I L+ ++W+ VY D+EGDM
Sbjct: 664 SRTCTKVHKHG-AVGRALDLSKFRGYTQLLEELQHLFGIDESLNG-SEWQTVYVDNEGDM 721
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+LVGDDPW EFC V+ I I S +++K++
Sbjct: 722 LLVGDDPWEEFCTTVRCIRILSPAEIQKLT 751
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 222/302 (73%), Gaps = 6/302 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+QE DEVYAQ+TL+P+ ++E + P P H F K LTASDTSTHGGFSV R
Sbjct: 136 ADQEMDEVYAQLTLVPDSEKSEKCIEEQLPV-PPSSTPHMFCKTLTASDTSTHGGFSVPR 194
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A +C PPLD +Q P+QELVAKDLHG EWRF+HIFRGQPRRHLLTTGWS FV+ KRLV
Sbjct: 195 RAAEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLV 254
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD +FLR ENGEL +G+R ++QQSS+PSSV+SS +H GVLA +HAVAT++MF ++
Sbjct: 255 AGDAVLFLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIF 314
Query: 182 YKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
Y PRTS +F+I +KY+++ N+ F++GMR+KMRFE ED+ ERR++GT+VG+ D P W
Sbjct: 315 YNPRTSPTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRW 374
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPL 298
+S+WRS KV WDE A+ R +RVSPWEIEPF ++ N + + KR R S P
Sbjct: 375 PNSEWRSFKVGWDEHAAQERQERVSPWEIEPFTSATGLNALPG--PRVKRLRTSFPTAPT 432
Query: 299 DL 300
DL
Sbjct: 433 DL 434
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 116/218 (53%), Gaps = 25/218 (11%)
Query: 401 NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISA-AA 459
++T Q + K + +C+LFG L+ + P+SS TE + S
Sbjct: 684 SETPCPQAKDISKVKGERNCKLFGFSLLKESACV----DDPISSAMTEDGVSSDGGLHVP 739
Query: 460 DSDGKSDIA---------KEFKEKKQEQVQVSPKE------SQSKQSCLTSNRSRTKVQM 504
DG A KE ++ + E ++ + S S RS TKV
Sbjct: 740 PGDGPFQTAHSKHSDQSEKELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHK 799
Query: 505 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 563
QG AVGRA+DL+ L GYD LI ELE +F+++G L T K W IVYTD+EGD+MLVGDDPW
Sbjct: 800 QGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDIMLVGDDPW 859
Query: 564 HEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDIL 601
EFCN+V +I IC+ ++V+KM+PG MFS + +
Sbjct: 860 QEFCNIVCKILICTQEEVQKMTPG----MFSEDAQSCF 893
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 200/273 (73%), Gaps = 5/273 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSV 59
AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT+THGGFSV
Sbjct: 201 AEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSV 259
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GWS FVTSK+
Sbjct: 260 PKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKK 319
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA++T TMF
Sbjct: 320 LVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHAISTGTMFT 379
Query: 180 VYYKPRTS-QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
VY++P TS +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT+VG+ED +
Sbjct: 380 VYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIR 439
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S+WR KVQWD P+RV+ W IEP
Sbjct: 440 WPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 472
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 421 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 638 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 689
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 538
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 690 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 749
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 750 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 796
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 199/273 (72%), Gaps = 5/273 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSV 59
AE TDEV+AQ+TLLPE Q E +PD + R +SFSK LT SDT+THGGFSV
Sbjct: 96 AEACTDEVFAQVTLLPEAKQ-EWQSPDHGNSQFFPRRTHSYSFSKTLTPSDTNTHGGFSV 154
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
++HA ECLPPLDM Q P QEL+AKDLHG EWRF+HIFRGQP+RHLLT+GWS FVTSK+
Sbjct: 155 PKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQFVTSKK 214
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD +FLRG NGEL VGVR R Q+++ +SV+S SM G+LA+A HA++T TMF
Sbjct: 215 LVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFHAISTGTMFT 274
Query: 180 VYYKPRTS-QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
VY++P TS +FII ++Y+++ N ++VG R++M FEGE+ ++R +GT+VG+ED
Sbjct: 275 VYFRPWTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQRCAGTIVGIEDVDAIR 334
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S+WR KVQWD P+RV+ W IEP
Sbjct: 335 WPNSEWRRFKVQWDTSDITPCPERVAAWNIEPI 367
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 94/167 (56%), Gaps = 10/167 (5%)
Query: 421 RLFGIELINHATSSAPSEKVPVSS-LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
+LFG+ LIN + + PS +V SS L + I T ++ ++ + + V
Sbjct: 533 KLFGVNLIN-SPAELPSPQVASSSELQSPCSIPPTSQSSISESIQA-------SEPSKSV 584
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL- 538
+ Q K C RS TKV G A+GR++DL GYD LI EL++MFD G L
Sbjct: 585 SGDLSDKQCKNCCSVMVRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLM 644
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+W + YTDDEGDMML+GD PW EF +MV+RIFIC ++ ++++
Sbjct: 645 DGSCRWHVTYTDDEGDMMLLGDYPWQEFRSMVQRIFICPKEETERLN 691
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 202/275 (73%), Gaps = 14/275 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
E TDE+YA+I+LLP+ S+ E PT+ ++ + F+KVL+ASDTS GGF +
Sbjct: 77 VETTTDEIYAEISLLPDTSEVEIPTSK----CENNIQNIKCFTKVLSASDTSKKGGFVLN 132
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
++HA ECLPPLDM+ TP+QE+ A D+HG+EW+FKH +G P+RHL T+GW+ F +K+L
Sbjct: 133 KRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTSGWNEFAKAKKL 192
Query: 121 VAGDTFVFLRGENGELHVGVRCLA-RQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
V GD+F+FLRGENGE VG++ A QQ ++PSS+IS +SMH GV+ATA +A+ + MFV
Sbjct: 193 VVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATALNAIKNKCMFV 252
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
V+YKPR+SQF+++++K+ + VN KF++G R+ M+FEG+D E E F PHWK
Sbjct: 253 VFYKPRSSQFVVNIDKFRDGVNKKFSIGSRFLMKFEGKDFNEIS--------ERFLPHWK 304
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
DS+WR L+VQWDE A+I RPD+VSPWEIEP S+
Sbjct: 305 DSEWRCLEVQWDEAATIPRPDKVSPWEIEPLTHSS 339
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 40/210 (19%)
Query: 397 SKPN-NDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTI 455
SKPN N+ +++ ++ T TS RLFG++L KVP + + I
Sbjct: 377 SKPNYNEQMVQAMKETSTTTATTSYRLFGVDL-----------KVPAKTKDSIEPI---- 421
Query: 456 SAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDL 515
+S KS I+K F+E+K + +Q RS TKV+M+G A+ R +DL
Sbjct: 422 ----NSYKKSKISKIFEEEKVDHIQT---------------RSHTKVRMEG-AMERTVDL 461
Query: 516 TTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+ GY+ LIDELE +FDIKG+LH +W+IV+ + +GD+ML+GDDPW +FCN + IFI
Sbjct: 462 SIFDGYNQLIDELERLFDIKGKLHIHNQWKIVFINADGDIMLLGDDPWPKFCNTAEEIFI 521
Query: 576 CSSQDVKKMSPGSKLPMFSIEGEDILLSSD 605
CS D K +K EG+ IL +++
Sbjct: 522 CSKNDAKVGDADNKFS----EGDPILTTTN 547
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/301 (51%), Positives = 204/301 (67%), Gaps = 6/301 (1%)
Query: 1 MAEQETDEVYAQITLLPEP---SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
+A+QETDEV+AQ+TL+PEP N + + +P +H F K LTASDTSTHGGF
Sbjct: 103 LADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLSKPTLHMFCKTLTASDTSTHGGF 162
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A +C PPLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRHLLTTGWS FV+
Sbjct: 163 SVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLLTTGWSVFVSP 222
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
K L +FLRGENGEL +G+R R+ SS+PSSV S Q+++L V+A A++AVAT++M
Sbjct: 223 KVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAAATNAVATKSM 282
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F ++Y PR S +FII KY+ + VG R++M+FE ED+ E+R++G V + D
Sbjct: 283 FHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAEKRYTGIVTSIGDAD 342
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSME 294
P W SKWRSLKV WDE + R +RVSPWEIEP +A + N+ K R L +
Sbjct: 343 PVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNVSSGTRCKRLRANLPVS 402
Query: 295 V 295
V
Sbjct: 403 V 403
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 108/188 (57%), Gaps = 19/188 (10%)
Query: 419 SCRLFGIELINHATSSAPSEK--------VPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
SC+LFGI L A +EK + + S TT+ HI ++ + + K
Sbjct: 724 SCKLFGISLTEELPCVAVTEKGDFGKHEGMDIKSFTTKSHI--NFGSSPNYFSHPEPFKG 781
Query: 471 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
FKE+ ++S ++ S T R TKV QG VGRA+DL+ GYD LI+ELE
Sbjct: 782 FKER----AKLSTEQEISFPIQPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELER 837
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
+FD++G L+ K W++VYTD+E D+MLVGDDPW EFCN+V +I I + +V+K+ PG
Sbjct: 838 LFDMEGLLNNPEKGWQVVYTDNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKLRPG-- 895
Query: 590 LPMFSIEG 597
MFS E
Sbjct: 896 --MFSDEA 901
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 208/296 (70%), Gaps = 11/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTHG 55
A+QE D+VYAQ+TLLPE NE + + ++ H F K LTASDTSTHG
Sbjct: 13 ADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFCKTLTASDTSTHG 72
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV
Sbjct: 73 GFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSVFV 132
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL +L+ A++A++T+
Sbjct: 133 NQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSILSPAANALSTK 192
Query: 176 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
+MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E+R +G + G D
Sbjct: 193 SMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKRCTGAITGACD 252
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L PV + KR
Sbjct: 253 VDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSCPVAPRIKR 306
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 208/296 (70%), Gaps = 11/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTHG 55
A+QE D+VYAQ+TLLPE NE + + ++ H F K LTASDTSTHG
Sbjct: 117 ADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFCKTLTASDTSTHG 176
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV
Sbjct: 177 GFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSVFV 236
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
K LV+GD +FLRGE+GEL +G+R +R SS+P SV+SSQ +HL +L+ A++A++T+
Sbjct: 237 NQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLSILSPAANALSTK 296
Query: 176 TMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
+MF V+Y PR S+F+I KY+++++ ++GMR+KMR E EDS E+R +G + G D
Sbjct: 297 SMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKRCTGAITGACD 356
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
P W +SKWR L V+WD+ + + R +RVSPWEIEP + + P L PV + KR
Sbjct: 357 VDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSL--SLPALSCPVAPRIKR 410
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/226 (68%), Positives = 184/226 (81%), Gaps = 4/226 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEV+AQITLLPEP+Q+E +P P PR VHSF K LTASDTSTHGGFSVL
Sbjct: 99 AKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVL 158
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLP LDM+Q PTQ+LVAKDLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 159 RRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 218
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLR E EL VGVR RQQ ++PSSVISS SMHLGVLATA HAV+T TMF V
Sbjct: 219 VAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTV 277
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
YYKPR S +FI+ ++Y+E+V + +++GMR+KMRFEGE++PE+R
Sbjct: 278 YYKPRISPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRL 323
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/202 (70%), Positives = 170/202 (84%), Gaps = 2/202 (0%)
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
AS TSTHGGFSVLR+HA ECLPPLDM QS PTQELVAKDLHG EWRF+HIFRGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
+GWS FV+SKRLVAGD F+FLRGE+GEL VGVR RQ S++ SSVISS SMHLGVLAT
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 168 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
A HA+ T+TMF VYYKPRT S+FII +KY+++V N +++G R+KMRFEGE++PE+RF+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180
Query: 226 GTVVGVEDFSPHWKDSKWRSLK 247
GT+VG ++ W +S WRSLK
Sbjct: 181 GTIVGSDNLDQLWPESSWRSLK 202
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 207/332 (62%), Gaps = 14/332 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV------HSFSKVLTASD 50
A+ TDEVYAQ++LLPE + E T D K H F K LTASD
Sbjct: 38 ADASTDEVYAQLSLLPENEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASD 97
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD +Q P QELVAKDLHG EW+F+HI+RGQPRRHLLTTG
Sbjct: 98 TSTHGGFSVPRRAAEDCFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTG 157
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS FV K+LV+GD +FLRG++GEL +GVR + ++ + SQ +LG LA +H
Sbjct: 158 WSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAH 217
Query: 171 AVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
AVAT++MF ++Y PR SQ FI+ K+ ++ + F+VG R+KMR+E ED+ ERR++G +
Sbjct: 218 AVATKSMFQIFYNPRLSQSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGII 277
Query: 229 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++ +L P +K +
Sbjct: 278 TGTGDADPMWRGSKWKCLLVRWDDDGEFRRPNRVSPWEIELTSSASGSHLAAPT-SKRMK 336
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P L P +P P A AQ + Q
Sbjct: 337 PYLPHANPEFTVPHGGGRPDFAESAQVRKVLQ 368
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/328 (47%), Positives = 212/328 (64%), Gaps = 9/328 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTH 54
+A+ TDEVYAQ++L+PE + D D K H F K LTASDTSTH
Sbjct: 95 LADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTH 154
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 155 GGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAF 214
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVAT
Sbjct: 215 VNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVAT 274
Query: 175 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 275 ESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGIITGSG 334
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 335 DTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCLP 393
Query: 293 MEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P +P P A AQ H + Q
Sbjct: 394 HVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/318 (48%), Positives = 203/318 (63%), Gaps = 22/318 (6%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTP--------------DPCPADSPRPKVHSFSKVL 46
+A +E DEVY Q+ LLP+P P PA S H F K L
Sbjct: 107 LANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKS---TPHMFCKTL 163
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 164 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 223
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV+ K LV+GD +FLRGE+GEL +G+R R ++ +P SVI Q+ + VL+
Sbjct: 224 LTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPSVLS 283
Query: 167 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
++A++T++MF V Y PR S F++ KY++++ N +G R+KMRFE +DSPERR
Sbjct: 284 VVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSPERRC 343
Query: 225 SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
SG V G+ D +P+ W +SKWR L V+WDE +RVSPWEI+P V + P L
Sbjct: 344 SGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSV--SLPPLSIQSS 401
Query: 284 AKNKRPRLSMEVPPLDLP 301
+ K+ R S++ P D P
Sbjct: 402 PRLKKLRTSLQATPPDNP 419
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 543
ES + S + RS TKV QG VGRA+DL+ L GY L+ ELE +F ++G L K
Sbjct: 654 ESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGLLQDPNKG 713
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
W I+YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 714 WRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 757
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 205/311 (65%), Gaps = 13/311 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------HSFSKVLTASDTST 53
AE TDEVYAQ++L+PEP + + + ++ H F K LTASDTST
Sbjct: 88 AEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTLTASDTST 147
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
HGGFSV R+ A +C P LD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS+
Sbjct: 148 HGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSS 207
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVA 173
FV K+LV+GD +FLRGENGEL +G+R AR + +P S++ SQ+++L LA S AV+
Sbjct: 208 FVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAVSTAVS 267
Query: 174 TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
T++MF VYY PR S +FII K+ +++N ++G R+KMR+E ED+ E+R +G + G+
Sbjct: 268 TKSMFHVYYNPRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQRPTGLITGI 327
Query: 232 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
D P W SKWR L V+WDE A D+VSPWEIEP + + P+ +K+PR
Sbjct: 328 GDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEP--SGSLSGFSSPLTPGSKKPR 385
Query: 291 LSMEVPPLDLP 301
+S+ D P
Sbjct: 386 ISLPSIKADFP 396
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 17/173 (9%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
GTSCRLFG L A + + PV+S + + + T A+S KQ
Sbjct: 647 GTSCRLFGFPLTKEAPVANTVDPTPVASQSAKDLDLKTCLPTANS---------MIPGKQ 697
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
+V + S T+ RS TKV QG VGRA+DL+ L GYD LI ELE +F+++G
Sbjct: 698 LHAEV-------QSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEG 750
Query: 537 QLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
L+ K W++VYTDDE DMMLVGDDPW EFCN+V +I I + +V+ M PG
Sbjct: 751 LLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGG 803
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 211/328 (64%), Gaps = 9/328 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTH 54
+A+ TDEVYAQ++L+PE + D D K H F K LTASDTSTH
Sbjct: 95 LADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTH 154
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 155 GGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAF 214
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVAT
Sbjct: 215 VNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVAT 274
Query: 175 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 275 ESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGSG 334
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 335 DTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCLP 393
Query: 293 MEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P +P P A AQ H + Q
Sbjct: 394 HVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 155/277 (55%), Positives = 192/277 (69%), Gaps = 4/277 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ TDEV+AQ+ L P+ P + + V SF K LTASDTSTHGGFSV R
Sbjct: 67 ADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTSTHGGFSVPR 126
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A +CLP LD + + P QELVAKDLHG EW F+HI+RG PRRHLLTTGWS FV+ KRLV
Sbjct: 127 RAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSVFVSQKRLV 186
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGDT +FLRGENG+L VGVR ++Q S+ S+ ++HLGVLA ASHA + F V
Sbjct: 187 AGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAATERLRFSVI 246
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
Y PRT S+F+I +KYL+ N VG R+KM+FE ++S ERR+SGT+V V D P W
Sbjct: 247 YNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYSGTIVEVSDADPLKW 306
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
+S WRS+KV+WDE AS R +RVSPWEIEPFV +T
Sbjct: 307 PNSAWRSMKVEWDESAS-ERHERVSPWEIEPFVPIST 342
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 200/315 (63%), Gaps = 41/315 (13%)
Query: 1 MAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSPRPKV 39
+A +E DEVY Q+TLLP+P PT P
Sbjct: 115 LANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP---------- 164
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+R
Sbjct: 165 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 224
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 159
GQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I +Q+
Sbjct: 225 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQN 284
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
+ VL+ A++AVAT++MF V+Y PR S +F+I KY++++ N ++G R+KMR++ +
Sbjct: 285 SYPNVLSLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMRYDMD 344
Query: 218 DSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
DSPERR SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+P V+
Sbjct: 345 DSPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVS---- 400
Query: 277 NLVQPVLAKNKRPRL 291
P L+ PRL
Sbjct: 401 ---LPPLSIQSSPRL 412
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
+ RS TKV QG VGRA+DL+ L GY L ELE +F ++G L K W+I+YTD E
Sbjct: 667 SGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQILYTDSE 726
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
DMM+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 727 NDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 761
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 211/328 (64%), Gaps = 9/328 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV------HSFSKVLTASDTSTH 54
+A+ TDEVYAQ++L+PE + D D K H F K LTASDTSTH
Sbjct: 95 LADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTH 154
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R+ A +C PPLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 155 GGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAF 214
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA +HAVAT
Sbjct: 215 VNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVAT 274
Query: 175 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+++F +YY PR SQ FI+ K++++++ F+VG+R+KMR+E ED+ ERR++G + G
Sbjct: 275 ESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATERRYTGIITGSG 334
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
D P W SKW+ L V+WD+ A RP+RVSPWEIE + + +L P +K +P L
Sbjct: 335 DTDPMWHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLSTP-HSKRLKPCLP 393
Query: 293 MEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P +P P A AQ H + Q
Sbjct: 394 HVNPEYMVPRGGGCPDFAESAQFHKVLQ 421
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 207/332 (62%), Gaps = 14/332 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSPRPKV------HSFSKVLTASD 50
A+ TDEVYAQ++LLPE + E T D K H F K LTASD
Sbjct: 128 ADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFCKTLTASD 187
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFS R+ A +C P LD NQ P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTG
Sbjct: 188 TSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTG 247
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS FV K+LV+GD +FLRG++GEL +GVR + ++ + SQ +LG LA +H
Sbjct: 248 WSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTH 307
Query: 171 AVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
AV+T++MF ++Y PR SQ FI+ K+ ++++ F+VG R+KMR+E ED+ ERR++G +
Sbjct: 308 AVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGII 367
Query: 229 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G D P W+ SKW+ L V+WD+ RP+R+SPWEIE A++ +L P +K +
Sbjct: 368 TGTVDADPRWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPT-SKRMK 426
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P L P +P P A AQ + Q
Sbjct: 427 PYLPHANPEYTVPYGGGRPDFAESAQLRKVLQ 458
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 203/295 (68%), Gaps = 10/295 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS+ R
Sbjct: 90 ADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFSIPR 149
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 150 RAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAKRLQ 209
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F ++
Sbjct: 210 TGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRFTIF 269
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG D P
Sbjct: 270 YNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDLDPV 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 289
W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 330 RWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPAELSHMN 795
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 203/295 (68%), Gaps = 10/295 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+TL P +Q + + R F K LTASDTSTHGGFS+ R
Sbjct: 90 ADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQPSEYFCKTLTASDTSTHGGFSIPR 149
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD +Q P QE+VA+DLH EWRF+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 150 RAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTTGWSVFVSAKRLQ 209
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
GD +F+R E G+L +G+R RQQ+SMP S++S+ SM++G+LA A+HA +T + F ++
Sbjct: 210 TGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAAHANSTSSRFTIF 269
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAV--GMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
Y PR S+F+I L+KY AV N V GMR++M+FE E+S RR +GT+VG D P
Sbjct: 270 YNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHTGTIVGSGDLDPV 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLA-KNKRP 289
W +S WRSLKV+WDEPA+ + R+S WEIEP ++TP LV P ++KRP
Sbjct: 330 RWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEP---ASTPYLVCSPSFTFRSKRP 381
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKV G +VGR+LDLT L YD L EL MF ++GQL R+ W++V+ D+E D
Sbjct: 706 RTFTKVYKTG-SVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I S ++ M+
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHMN 795
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/278 (52%), Positives = 201/278 (72%), Gaps = 14/278 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTHG 55
AE TDEV+A+ITLLP ++E ++ D +H SF+K LT SDT THG
Sbjct: 72 AEAGTDEVFARITLLPVAEEDELSSNK----DGKSLPLHRKTCARSFTKKLTPSDTKTHG 127
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV ++HA +CLPPLD +Q P QEL+AKDLHG+EW FKHI+RGQP+RHL+T+GWSTFV
Sbjct: 128 GFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRHLITSGWSTFV 187
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
+SKRLVAGD+F+FLRGE+GEL VGVR + ++++ ++++SS SM LG+L++ASHA+ T
Sbjct: 188 SSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGILSSASHAITTG 247
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
+MF +Y+ P TS +FII ++Y+++ ++ G R++M FEGE+ E+RF GTVVG ED
Sbjct: 248 SMFTIYFHPWTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEECAEQRFEGTVVGTED 307
Query: 234 FS-PHWKDSKWRSLKVQWDEPAS-ITRPDRVSPWEIEP 269
W +S+WR LKV+WD + +RVSPW IEP
Sbjct: 308 VDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEP 345
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 206/335 (61%), Gaps = 20/335 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV--------------HSFSKVLT 47
A+ TDEVYAQ++LLPE NE H F K LT
Sbjct: 124 ADASTDEVYAQLSLLPE---NEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCKTLT 180
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
ASDTSTHGGFSV R+ A +C PPLD +Q P+QEL AKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 181 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRRHLL 240
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
TTGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + SQ +LG LA
Sbjct: 241 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNLGTLAN 300
Query: 168 ASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
+HAVAT+ MF +YY PR SQ FI+ K+ ++++ F+VG+R+KMR+E ED+ ERR++
Sbjct: 301 VAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAERRYT 360
Query: 226 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
G + G D P W+ SKW+ L V+WD+ RP+RVSPWEIE +++ +L P +K
Sbjct: 361 GIITGTGDADPMWRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHLATPA-SK 419
Query: 286 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P LS P +P P AQ + Q
Sbjct: 420 RLKPCLSHVNPEYMVPHGGGRPDFVESAQFRKVLQ 454
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/295 (53%), Positives = 194/295 (65%), Gaps = 59/295 (20%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE +TDEVYAQITLLPEP+Q+E + P PR +VHSF K LTASDTSTHGGFSVL
Sbjct: 106 AEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVL 165
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+HA ECLPPLDM++ PTQELVAKDLH EWRF+HIFRGQPRRHLL +GWS FV+SKRL
Sbjct: 166 RRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRL 225
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD F+FLR + PS I
Sbjct: 226 VAGDAFIFLR------------------TSPSEFI------------------------- 242
Query: 181 YYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWK 239
+ ++Y+E+V N +++GMR+KMRFEGE++PE+RF+GT+VG+ED P W
Sbjct: 243 ----------VPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWA 292
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSM 293
SKWRSLKV+WDE +SI RP+RVSPW+IEP +A P + PV + + KRPR +M
Sbjct: 293 KSKWRSLKVRWDETSSIPRPERVSPWKIEPALA---PPALSPVPMTRPKRPRSNM 344
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 106/178 (59%), Gaps = 17/178 (9%)
Query: 419 SCRLFGIELINHA--TSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+CRLFGI L+N+ T S S++ ++L T A+ SD +K K
Sbjct: 571 NCRLFGIPLVNNVNETDSTMSQR---NNLNENSGF--TQMASPKVQDLSDHSKGSKSTND 625
Query: 477 EQVQVSPKESQSKQ------SCLT-SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
+ Q P SQ+KQ C T SNRS TKV QG+A+GR++DL+ Y+ LI EL+
Sbjct: 626 HREQGRP--SQAKQPHAKDSHCKTNSNRSCTKVHKQGIALGRSVDLSKFQNYEELIAELD 683
Query: 530 EMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+F+ G+L K W IVYTDDE DMMLVGDDPW EFC MV++IFI + ++V+ M+P
Sbjct: 684 MLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRNMNP 741
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 214/334 (64%), Gaps = 19/334 (5%)
Query: 2 AEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKV----HSFSKVLTA 48
A+ TDEVYAQ+ L+ E + + D ++ + + H F K LTA
Sbjct: 118 ADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPHMFCKTLTA 177
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 178 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 237
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRG++GEL +GVR A+ ++ + +Q +LG LA
Sbjct: 238 TGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGSLANV 297
Query: 169 SHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
+HAVAT+++F +YY PR SQ FII +K++++ + +F+ G+R+KMR+E +D+ ERR +G
Sbjct: 298 AHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDASERRCTG 357
Query: 227 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ G+ D P W+ SKW+ L V+WD+ RP+R+SPWEIE + + +L P AK
Sbjct: 358 VIAGIGDADPMWRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHLSAPN-AKR 416
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P L P +P+ + P A AQ H + Q
Sbjct: 417 LKPCLP---PDYLVPNGSGCPDFAESAQFHKVLQ 447
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 202/324 (62%), Gaps = 41/324 (12%)
Query: 1 MAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPADSPR 36
+A +E DEVY Q+TL P P S PT P
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP------- 166
Query: 37 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 96
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWRF+H
Sbjct: 167 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRH 223
Query: 97 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 156
I+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S++
Sbjct: 224 IYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVG 283
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRF 214
+Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+KMRF
Sbjct: 284 NQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRF 343
Query: 215 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
E +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P V
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSV-- 399
Query: 274 ATPNLVQPVLAKNKRPRLSMEVPP 297
+ P L + K+ R S++ P
Sbjct: 400 SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 671 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 730
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 731 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 765
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 200/322 (62%), Gaps = 37/322 (11%)
Query: 1 MAEQETDEVYAQITLLP---------------------EPSQNEPTTPDPCPADSPRPKV 39
+A +E DEVY Q+TLLP E ++ PT P
Sbjct: 110 LANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTP---------- 159
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K LTASDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EW+F+HI+R
Sbjct: 160 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYR 219
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 159
GQPRRHLLTTGWS FV+ K LV+GD +FLRGENGEL +G+R AR ++ +P S++ SQS
Sbjct: 220 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQS 279
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
+ L++ ++A++ ++MF V+Y PR S F + KY++++ N +G R+KM+FE +
Sbjct: 280 YYPNFLSSVANAISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMD 339
Query: 218 DSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
+SPERR SG V G+ D P+ W SKWR L V+WDE I DRVSPWE++P AS
Sbjct: 340 ESPERRCTSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDP-SASLP 398
Query: 276 PNLVQPV-LAKNKRPRLSMEVP 296
P +Q K RP L P
Sbjct: 399 PLSIQSSRRLKKLRPGLLAAAP 420
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
Query: 463 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
GK + K F + ++ SK+SC TKV QG VGRA+DL+ L Y+
Sbjct: 637 GKVNACKLFGFPLSRETTAQNLQNSSKRSC-------TKVHKQGSLVGRAIDLSRLSSYN 689
Query: 523 HLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L+ ELE +F ++G L K W I+YTD E D+M+VGDDPWHEFC++V +I I + ++V
Sbjct: 690 DLLIELERLFSMEGLLIDPNKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIHTQEEV 749
Query: 582 KKMSPG 587
+KM+ G
Sbjct: 750 EKMTIG 755
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/284 (50%), Positives = 191/284 (67%), Gaps = 15/284 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQN----------EPTTPDPCPADSP-RPKVHSFSKVLTAS 49
+A +E DEVY Q+TLLP+P E + SP + H F K LTAS
Sbjct: 114 LANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTLTAS 173
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 174 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 233
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ + VL++ +
Sbjct: 234 GWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLSSVA 293
Query: 170 HAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF-SG 226
+A++T++ F V+Y PR S F++ KY++++ N ++G R+KMRFE ++S ERR SG
Sbjct: 294 NAISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCSSG 353
Query: 227 TVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
T++ D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 354 TLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDP 397
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 16/158 (10%)
Query: 439 KVPVSSLTTEGHIISTISAAADS--------DGKSDIAKEFKEKKQEQVQVSPKESQSKQ 490
+V S L E + IS+AA+ GK + K F + ++ +K+
Sbjct: 604 EVGRSDLPNEHKLQDNISSAANMGVSNDNNVQGKVNACKLFGFSLSGETTAQNLQNSAKR 663
Query: 491 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYT 549
SC TKV QG VGRA+DL+ L GY+ L+ ELE +F ++G L K W I+YT
Sbjct: 664 SC-------TKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRILYT 716
Query: 550 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
D E D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIG 754
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 207/317 (65%), Gaps = 25/317 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQ-------------NEPTTPDPCPADSPRPKVHSFSKVLTA 48
AE+ +DEVY Q+ L+PE Q E T + +P H F K LTA
Sbjct: 104 AEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTP----HMFCKTLTA 159
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLT
Sbjct: 160 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLT 219
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRG++GEL +G+R A+ +S + S Q + G L
Sbjct: 220 TGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTLMDV 279
Query: 169 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
++A++++ F Y PR +S+FII +NK++++++ ++VGMR++MRFE EDS ERRF+G
Sbjct: 280 ANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERRFTG 339
Query: 227 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
V+G+ D P W SKWR L V+WD+ R +RVSPWEIEPF SA+ NL+ L
Sbjct: 340 LVLGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPWEIEPF-GSASNNLMAAGL-- 395
Query: 286 NKRPRLSMEVPPLDLPS 302
KR R+ M ++ P+
Sbjct: 396 -KRTRIGMTSTKMEFPA 411
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 212/334 (63%), Gaps = 16/334 (4%)
Query: 2 AEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKV----HSFSKVLTA 48
A+ TDEVYAQ+ L+ E + + D ++ + + H F K LTA
Sbjct: 113 ADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTLTA 172
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 173 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 232
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 233 TGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLPNV 292
Query: 169 SHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
+HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K+++E +D+ ERR +G
Sbjct: 293 AHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRCTG 352
Query: 227 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + + AK
Sbjct: 353 IIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAPNAKR 411
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P L P +P+ + P A AQ H + Q
Sbjct: 412 LKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 212/334 (63%), Gaps = 16/334 (4%)
Query: 2 AEQETDEVYAQITLLPE---------PSQNEPTTPDPCPADSPRPKV----HSFSKVLTA 48
A+ TDEVYAQ+ L+ E + + D ++ + + H F K LTA
Sbjct: 113 ADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHMFCKTLTA 172
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 173 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 232
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRG+NGEL +GVR A+ ++ + +Q ++LG L
Sbjct: 233 TGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLNLGSLPNV 292
Query: 169 SHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
+HAVAT+++F +YY PR SQ FII +K++++ + F+ G R+K+++E +D+ ERR +G
Sbjct: 293 AHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASERRCTG 352
Query: 227 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ G+ D P W+ SKW+ L V+WD+ +P+R+SPWEIE +S + + + AK
Sbjct: 353 IIAGIGDADPMWRGSKWKCLMVRWDDDVDFRQPNRISPWEIE-LTSSVSGSHMSAPNAKR 411
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P L P +P+ + P A AQ H + Q
Sbjct: 412 LKPCLPHVNPDYLVPNGSGRPDFAESAQFHKVLQ 445
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/324 (47%), Positives = 202/324 (62%), Gaps = 41/324 (12%)
Query: 1 MAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPADSPR 36
+A +E DEVY Q+TL P P S PT P
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTP------- 166
Query: 37 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 96
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWRF+H
Sbjct: 167 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRH 223
Query: 97 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 156
I+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S++
Sbjct: 224 IYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVG 283
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRF 214
+Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+KMRF
Sbjct: 284 NQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRF 343
Query: 215 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
E +DSPERRF+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P V
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSV-- 399
Query: 274 ATPNLVQPVLAKNKRPRLSMEVPP 297
+ P L + K+ R S++ P
Sbjct: 400 SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/324 (47%), Positives = 202/324 (62%), Gaps = 41/324 (12%)
Query: 1 MAEQETDEVYAQITLLPEP------------------------SQNEPTTPDPCPADSPR 36
+A +E DEVY Q+TL P P S PT P
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTP------- 166
Query: 37 PKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKH 96
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EWRF+H
Sbjct: 167 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRH 223
Query: 97 IFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS 156
I+RGQPRRHLLTTGWS FV+ K L++GD +FLRGENGEL +G+R R ++ +P S++
Sbjct: 224 IYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVG 283
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRF 214
+Q+ LA A++T++ F V+Y PR +QFIIS KY++++NN +VG R+KMRF
Sbjct: 284 NQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRF 343
Query: 215 EGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
E +DSPER+F+G VVG+ D S W +SKWR L V+WD+ + +RVSPWEI+P V
Sbjct: 344 EMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDSD--HQERVSPWEIDPSV-- 399
Query: 274 ATPNLVQPVLAKNKRPRLSMEVPP 297
+ P L + K+ R S++ P
Sbjct: 400 SLPPLSVQSSPRLKKLRTSLQAAP 423
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
+ RS TKV QG VGRA+DL+ L GY LI ELE +F ++G L K W ++YTD+E
Sbjct: 602 SGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNE 661
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
D+M+VGD PWH+FC+ V +I I + ++V+KM+ G
Sbjct: 662 NDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNG 696
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 205/348 (58%), Gaps = 78/348 (22%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 87 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 146
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 147 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 206
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLR E
Sbjct: 207 SVFVSAKRLVAGDAFIFLRTSPAE------------------------------------ 230
Query: 172 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
FVV S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 231 ------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGI 273
Query: 232 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR R
Sbjct: 274 GASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSR 330
Query: 291 LSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
S+ P D+ + S +A S HN TQL+V D
Sbjct: 331 SSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 549 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 602
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 603 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 662
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 663 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 722
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 723 KIFIYTREEVERMNPGA 739
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 205/348 (58%), Gaps = 78/348 (22%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 89 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 148
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 149 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 208
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLR E
Sbjct: 209 SVFVSAKRLVAGDAFIFLRTSPAE------------------------------------ 232
Query: 172 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
FVV S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 233 ------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGI 275
Query: 232 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR R
Sbjct: 276 GASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSR 332
Query: 291 LSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
S+ P D+ + S +A S HN TQL+V D
Sbjct: 333 SSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 380
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 551 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 604
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 605 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 664
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 665 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 724
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 725 KIFIYTREEVERMNPGA 741
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/309 (49%), Positives = 192/309 (62%), Gaps = 67/309 (21%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDTS 52
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDTS
Sbjct: 88 EPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDTS 147
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GWS
Sbjct: 148 THGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGWS 207
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 172
FV++KRLVAGD F+FLR E
Sbjct: 208 VFVSAKRLVAGDAFIFLRTSPAE------------------------------------- 230
Query: 173 ATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
FVV S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 231 -----FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGIG 274
Query: 233 DFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR R
Sbjct: 275 ASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSRS 331
Query: 292 SMEVPPLDL 300
S+ P D+
Sbjct: 332 SVNALPSDV 340
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/310 (49%), Positives = 192/310 (61%), Gaps = 67/310 (21%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 87 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 146
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 147 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 206
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLR E
Sbjct: 207 SVFVSAKRLVAGDAFIFLRTSPAE------------------------------------ 230
Query: 172 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
FVV S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 231 ------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGI 273
Query: 232 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR R
Sbjct: 274 GASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSR 330
Query: 291 LSMEVPPLDL 300
S+ P D+
Sbjct: 331 SSVNALPSDV 340
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 25/197 (12%)
Query: 411 GRKTETGTSCRLFGIELINHATSSAPSEKVPV---SSLTTEGHIISTISAAADS------ 461
G + GTS +LFGI L +P + P+ S+ +G + ++ S +
Sbjct: 545 GVQKSKGTSFKLFGIPL------GSPEKSEPLVSPPSVAYDGKLQTSPSEKGNQLDVVEV 598
Query: 462 DGKSDIAKEFK-------EKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGVAVGRA 512
D S +K K + E Q SP+ + + Q+ + +S RS KV QG A+GR+
Sbjct: 599 DNCSHPSKTVKPLDGPQSDSITENNQPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRS 658
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT YD LI EL++MFD G+L + K W +VYTD+EGD+MLVGDDPW+EFC+MV
Sbjct: 659 IDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVGDDPWNEFCDMVH 718
Query: 572 RIFICSSQDVKKMSPGS 588
+IFI + ++V++M+PG+
Sbjct: 719 KIFIYTREEVERMNPGA 735
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/313 (47%), Positives = 200/313 (63%), Gaps = 16/313 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKV-------HSFSKVLTAS 49
+A +E DEVY Q++LLP P E + D R V H F K LTAS
Sbjct: 123 LANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCKTLTAS 182
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 183 DTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTT 242
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV+ K LV+GD +FLRGE G+L +G+R AR ++++P S+I SQ VL+ +
Sbjct: 243 GWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDVLSAVA 302
Query: 170 HAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
AV+T++ F V+Y PR S F++ KY++++ + VG R+KMRF+ +DSPERR+SG
Sbjct: 303 SAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPERRYSGV 362
Query: 228 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
V G+ D P W +SKWR L V+WDE +RVSPWEI+ V + P L +
Sbjct: 363 VTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSV--SLPPLSIQSSPRL 420
Query: 287 KRPRLSMEVPPLD 299
K+ R S + P+D
Sbjct: 421 KKLRTSQQAQPVD 433
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
KE + S + RS TKV Q +GR DL+ L G+ L+ ELE + +I+ L K
Sbjct: 667 KEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDPKK 726
Query: 544 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
W I+YTD + D+M+VG DPWHEFC +V +I I + ++V+KM+
Sbjct: 727 GWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMT 769
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 198/320 (61%), Gaps = 16/320 (5%)
Query: 1 MAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSKVLTAS 49
+A +E DEVY ++TLLP+P Q + A + H F K LTAS
Sbjct: 101 LANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKTLTAS 160
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C P LD Q P+QEL+AKDLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 161 DTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLLTT 220
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV+ K LV+GD +FLRGE GEL +G+R AR ++ +P SV Q+ L+ S
Sbjct: 221 GWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSALSLVS 280
Query: 170 HAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
+A++T+++F V Y PR + F++ KY++++ N +G R+KMRFE +DSPERR SG
Sbjct: 281 NAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERRCSGV 340
Query: 228 VVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
V G D P+ W +SKWR L V+WDE +RVSPWEI+ V + P L+ +
Sbjct: 341 VTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASV--SLPPLIIQSSPRL 398
Query: 287 KRPRLSMEVPPLDLPSAASA 306
K+ R ++ P D P A
Sbjct: 399 KKLRTGLQAAPPDKPIAGGG 418
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT-RTKWEIVYTDDE 552
TS RS TKV QG VGRA+DL+ L GY L++ELE +F ++G L W I+YTD E
Sbjct: 592 TSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSE 651
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D+M+VGDDPW EFCN+ +I I + ++V+KM+
Sbjct: 652 NDVMVVGDDPWLEFCNVATKIHIYTQEEVEKMT 684
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 205/348 (58%), Gaps = 78/348 (22%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT----------PDPCPADSPRPKVHSFSKVLTASDT 51
E +TDEVYAQ+TLLP+ Q+E T+ P PA + P +HSF K LTASDT
Sbjct: 87 VEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTLTASDT 146
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSVLR+HA ECLPPLDM+Q P QELVAKDLHG EWRF+HIFRGQPRRHLL +GW
Sbjct: 147 STHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHLLQSGW 206
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV++KRLVAGD F+FLR E
Sbjct: 207 SVFVSAKRLVAGDAFIFLRTSPAE------------------------------------ 230
Query: 172 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
FVV S ++Y E++ +++GMR+KMRFEGE++ E+RF+GT+VG+
Sbjct: 231 ------FVV-----------SRDRYYESLKRNYSIGMRFKMRFEGEEAAEQRFTGTIVGI 273
Query: 232 EDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
P W DSKWRSLKV+WDEP+SI+RP+RVSPW+IEP S +P V P+ + KR R
Sbjct: 274 GASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP---SVSPCHVNPLPVRFKRSR 330
Query: 291 LSMEVPPLDLPSAASAPWSARLAQS---------HN--LTQLSVTAED 327
S+ P D+ + S +A S HN TQL+V D
Sbjct: 331 SSVNALPSDVSTVTREVTSKVMADSQQNSLTRALHNQGRTQLTVRYHD 378
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/297 (52%), Positives = 202/297 (68%), Gaps = 14/297 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASDTSTHGG
Sbjct: 88 ADVETDEVYAQMTLQPLSAQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASDTSTHGG 144
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV+
Sbjct: 145 FSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVS 204
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT +
Sbjct: 205 AKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNS 264
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 265 RFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISD 324
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 325 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 379
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
+NR+ KV G + GR+LD++ Y L EL MF ++G L R+ W++V+ D E
Sbjct: 753 TNRTFVKVHKSG-SFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPERSGWQLVFVDRE 811
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP-GSKLP 591
D++L+GDDPW EF N V I I S +V++M G LP
Sbjct: 812 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDLP 851
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 206/313 (65%), Gaps = 16/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---------HSFSKVLTASDT 51
AE+ +DEV+ Q+ L+PE Q ++ AD H F K LTASDT
Sbjct: 85 AEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTLTASDT 144
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 145 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGW 204
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S Q + L +A
Sbjct: 205 SAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQLSPTSLMDVVNA 264
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ + F ++Y PR TS+FII ++++L++++ ++ GMR++MRFE ED+ ERRF+G +V
Sbjct: 265 LSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETEDAAERRFTGLIV 324
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR L V+WD+ +TR +RVSPWEIEP +++T N + + A KR
Sbjct: 325 GIADVDPVRWPGSKWRCLMVRWDD-LEVTRHNRVSPWEIEPSGSASTANNL--MSAGLKR 381
Query: 289 PRLSMEVPPLDLP 301
++ + L+ P
Sbjct: 382 TKIGLPSAKLEFP 394
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/316 (50%), Positives = 203/316 (64%), Gaps = 24/316 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL+P P NE P R F K LTASDTSTHGGFS+
Sbjct: 155 ADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRSRQPTDYFCKTLTASDTSTHGGFSIP 214
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q+ P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 215 RRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRL 274
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+GVLA A+HA AT + F +
Sbjct: 275 QAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAAATSSRFTI 334
Query: 181 YYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I + KY +A+ N + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 335 FYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETEESSVRRYMGTITGMGDLDPI 394
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
W +S WRSLKV WDE + R RVS WEIEP TP L+ P P
Sbjct: 395 RWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL---TTPFLLCP--------------P 437
Query: 297 PLDLPSAASAPWSARL 312
PL A PW R+
Sbjct: 438 PLTF--RAKRPWGGRV 451
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
++R+ TKV G +VGR++D+ Y L EL +F+++G L R+ W++V+ D+E
Sbjct: 809 TSRTFTKVHKLG-SVGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLVFVDNE 867
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D +LVGDDPW EF N V+ I I S ++ +MS
Sbjct: 868 NDTLLVGDDPWEEFVNCVRSIKILSPNEILQMS 900
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/305 (46%), Positives = 196/305 (64%), Gaps = 21/305 (6%)
Query: 1 MAEQETDEVYAQITLLPEPS-----------QNEPTTPDPCPADSPRPKVHSFSKVLTAS 49
+A +E DEVY Q+TLLP P ++ T + + + H F K LTAS
Sbjct: 124 LANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCKTLTAS 183
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DT+THGGFSV R+ A +C PPLD + P+QEL+AKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 184 DTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTT 243
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV+ K LV+GD +FLRGE G L +G+R AR ++ +P S+I SQ VL++ +
Sbjct: 244 GWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDVLSSVA 303
Query: 170 HAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
A++ ++ F V+Y PR S F++ KY++A+N++ VG R+KM+F+ +DSPERR+SG
Sbjct: 304 TALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPERRYSGV 363
Query: 228 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
V G+ D P W +SKWR L V+WDE +RVSPWEI+ V+ P L+
Sbjct: 364 VTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVS-------LPPLSIQ 416
Query: 287 KRPRL 291
PRL
Sbjct: 417 SSPRL 421
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
KE + S + RS TKV QG VGRA+DL+ L GYD L+ ELE +F+++ L K
Sbjct: 670 KEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDPNK 729
Query: 544 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
W I+YTD E DMM+VGDDPWHEFC +V +I I + ++V+KM+
Sbjct: 730 GWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMT 772
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/277 (54%), Positives = 197/277 (71%), Gaps = 11/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDP-CPADSPRPK---VHSFSKVLTASDTSTHGGF 57
A+ ETDEVYAQ+TL P +Q + DP PAD P + F K LTASDTSTHGGF
Sbjct: 75 ADVETDEVYAQMTLQPLSAQEQK---DPYLPADLGTPSKQPTNYFCKTLTASDTSTHGGF 131
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A + PPLD +Q P QELVA+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++
Sbjct: 132 SVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSA 191
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD+ +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT +
Sbjct: 192 KRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSR 251
Query: 178 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 252 FTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 311
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 312 DPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 348
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
+ GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW E
Sbjct: 774 SFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQE 833
Query: 566 FCNMVKRIFICSSQDVKKM 584
F N V I I S ++V++M
Sbjct: 834 FVNSVSCIKILSPEEVQQM 852
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/287 (50%), Positives = 189/287 (65%), Gaps = 21/287 (7%)
Query: 1 MAEQETDEVYAQITLLPEP--------------SQNEPTTPDPCPADSPRPKVHSFSKVL 46
+A +E DEVY Q+TLLP+ E D P S H F K L
Sbjct: 113 LANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKS---TPHMFCKTL 169
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
TASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLH EW+F+HI+RGQPRRHL
Sbjct: 170 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHL 229
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV+ K LV+GD +FLRGENGEL +G+R R ++ +P SVI SQ+ + VL+
Sbjct: 230 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLS 289
Query: 167 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR- 223
+ ++A++T++ F V+Y PR SQ F++ KY++++ N ++G R+KMRFE ++S ERR
Sbjct: 290 SVANAISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRC 349
Query: 224 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
SG ++G D P+ W SKWR L V+WDE DRVSPWEI+P
Sbjct: 350 CSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDP 396
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Query: 455 ISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALD 514
+S + GK + K F + ++ +K+SC TKV QG VGRA+D
Sbjct: 628 VSIDNNVQGKVNACKLFGFSLSGETTTQNLQNSAKRSC-------TKVHKQGSLVGRAID 680
Query: 515 LTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRI 573
L+ L GY+ L+ ELE +F ++G L K W+I+YTD E D+M+VGDDPWHEFC++V +I
Sbjct: 681 LSRLSGYNDLLSELERLFSMEGLLKDPDKGWKILYTDSENDIMVVGDDPWHEFCDVVSKI 740
Query: 574 FICSSQDVKKMS 585
I + ++V+KM+
Sbjct: 741 HIYTQEEVEKMT 752
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 195/274 (71%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F+V
Sbjct: 206 VAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFIV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 499 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 555
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDV 776
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/305 (49%), Positives = 198/305 (64%), Gaps = 16/305 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---------SPRPKVHSFSKVLTASDTS 52
A+Q +DEVYAQ++L P P E P+ + S H F K LTASDTS
Sbjct: 83 ADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRSATPHMFCKTLTASDTS 142
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EW+F+HI+RGQPRRHLLTTGWS
Sbjct: 143 THGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTGWS 202
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-QQSSMPSSVISSQSMHLGVLATASHA 171
FV K+LVAGD +FLRGE+GEL +G+R R + S+PS + SQ++ A S A
Sbjct: 203 VFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLSGSTFAAVSKA 262
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
V+T+++F V Y PR S +FI+ KY + N +F++GMR+KM+ E ED+ ERR +G +
Sbjct: 263 VSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTAERRCTGLIS 322
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
GV D P W SKWR L V+WDE + R DRVSPWEI+ + + P + P KR
Sbjct: 323 GVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEID--LLGSVP-VFSPPATGLKR 379
Query: 289 PRLSM 293
PR+S+
Sbjct: 380 PRISL 384
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 112/201 (55%), Gaps = 21/201 (10%)
Query: 393 TPHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE- 448
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 606 APDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDP 656
Query: 449 GHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQG 506
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 657 AHV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQG 711
Query: 507 VAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHE 565
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW E
Sbjct: 712 SMVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQE 771
Query: 566 FCNMVKRIFICSSQDVKKMSP 586
FCN+V +I I + +V+KM P
Sbjct: 772 FCNIVSKILIYTHDEVEKMIP 792
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 201/293 (68%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 819
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 850
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 200/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNY-FCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD NQ P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 272 IFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 332 VRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 509 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 566
VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 790 VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEF 849
Query: 567 CNMVKRIFICSSQDVKKMS-PGSKL 590
N V I I S ++V++M PG +L
Sbjct: 850 VNSVSCIKILSPEEVQQMGKPGIQL 874
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 195/274 (71%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F+V
Sbjct: 206 VAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFIV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 499 RTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDM 555
RT V++ + ++GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D+
Sbjct: 717 RTFVKVYKSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDV 776
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+L+GDDPW EF N V I I S +DV+K+
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 203/294 (69%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D +
Sbjct: 272 IFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDA 331
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 568 NMVKRIFICSSQDVKKM 584
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/315 (51%), Positives = 206/315 (65%), Gaps = 20/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTAS TSTHGG
Sbjct: 88 ADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKQPTNYFCKTLTASGTSTHGG 144
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV+
Sbjct: 145 FSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVS 204
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT +
Sbjct: 205 AKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNS 264
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 265 RFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISD 324
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 325 LDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFSLRLKRPW-- 380
Query: 293 MEVPPLDLPSAASAP 307
P LPS P
Sbjct: 381 ----PSGLPSLTGFP 391
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
+NR KVQ G + GR+LD++ Y L EL MF ++G L R+ W++V D E
Sbjct: 755 TNRIFVKVQKSG-SFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGWQLVIVDRE 813
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW EF N V I I S +V++M
Sbjct: 814 NDVLLLGDDPWQEFVNNVWYIKILSPYEVQQM 845
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 202/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 86 ADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 145 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 205 LVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 IFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDS 324
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 325 TRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 373 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 423
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFTLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 424 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 481
G+ + S + S +P SS + T G S + + F + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSPENTGQV 777
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 539
+P + + KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPPTT-----------TFVKVYKSG-SFGRSLDISKFSRYHQLRSELAHMFGLEGELEDP 825
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 203/294 (69%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D +
Sbjct: 272 IFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDA 331
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 525 IDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
++EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF N V I I S Q+V+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 583 KM 584
+M
Sbjct: 860 QM 861
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 203/294 (69%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D +
Sbjct: 272 IFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDA 331
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 798 GRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFV 857
Query: 568 NMVKRIFICSSQDVKKM 584
N V I I S Q+V++M
Sbjct: 858 NSVSCIKILSPQEVQQM 874
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/341 (48%), Positives = 211/341 (61%), Gaps = 37/341 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 207 LVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 267 IFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDS 326
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP------ 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 327 TRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRPWPTGFP 384
Query: 290 ----------------------RLSMEVPPLDLPSAASAPW 308
L + PL+ P APW
Sbjct: 385 SFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPW 425
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 373 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 423
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 644 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 703
Query: 424 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 481
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 704 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 763
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 539
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 764 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 811
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 812 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 856
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 202/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P +Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 86 ADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 145 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 205 LVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+FII L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 IFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDS 324
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 325 TRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 373 QEAIDDNKNISAWPAH-SGHSTPHPSKPNNDTLLEQVET--------GRKTETGTSCRLF 423
Q + +NI PA+ S ++ P P + L+Q G E +
Sbjct: 658 QFVLSQGENIGTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQN 717
Query: 424 GIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQV 481
G+ + S + S +P SS + T G S + + F + + QV
Sbjct: 718 GMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQV 777
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-- 539
+P R+ KV G + GR+LD++ Y L EL MF ++G+L
Sbjct: 778 NPP-----------TRTFVKVYKSG-SFGRSLDISKFSSYHQLRSELAHMFGLEGELEDP 825
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
R+ W++V+ D E D++L+GDDPW EF N V I I S Q+V+ M
Sbjct: 826 LRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 201/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 272 IFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 332 VRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 383
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 785 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 843
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 844 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 877
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/268 (56%), Positives = 195/268 (72%), Gaps = 9/268 (3%)
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
ASDTSTHGGFSV R+ A +C PPLD NQ P+QEL+AKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
TTGWS FV K LV+GD +FLR ENGEL +G+R +RQQS +PSSV+SSQSMHLGVLA
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 168 ASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
A++AV+T++MF ++Y PR S +FII KY+++ + ++GMR+KMRFE ED+ ERR++
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180
Query: 226 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
G + G+ D P W SKWRSL V WDE A+ + +RVSPWEIEP ++ + L P +
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVS--GLSIPSCS 238
Query: 285 KNKRPRLSMEVPPLDLPSAASAPWSARL 312
+ KR R ++ P+D S P RL
Sbjct: 239 RIKRLRTNLPSTPVDF----SVPDGGRL 262
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 14/190 (7%)
Query: 412 RKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGH--------IISTISAAADS 461
R + SC+LFGI LI A S +P + +G + S+I+ + D
Sbjct: 572 RDIQGKHSCKLFGISLIKEPACMDDAISSGIPPDGVAQDGSHATYGRGLVQSSIAQSQDQ 631
Query: 462 DGKSDI---AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 518
K + + K EQ + K S+ S RS TKV QG AVGRA+DL+ L
Sbjct: 632 LLKDSLDHPGRSACLKGSEQQMTTQKVSKGPTLVQASGRSCTKVHKQGNAVGRAVDLSKL 691
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
GYD LI ELE +F+++G L+ K W++VYTD E DMMLVGDDPW EFCN+V +I I +
Sbjct: 692 DGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDMMLVGDDPWQEFCNIVCKILIYT 751
Query: 578 SQDVKKMSPG 587
+++KK +PG
Sbjct: 752 HEELKKWTPG 761
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/278 (54%), Positives = 194/278 (69%), Gaps = 12/278 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P +Q + D C PA+ P + F K LTASDTSTHGG
Sbjct: 88 ADNETDEVYAQMTLQPLSAQEQK---DVCLLPAELGMPSKQPTNYFCKTLTASDTSTHGG 144
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + PPLD +Q P QEL+AKDLHG EW+F+H+FRGQP+RHLLTTGWS FV+
Sbjct: 145 FSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLLTTGWSVFVS 204
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRLVAGD +F+ EN +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT +
Sbjct: 205 AKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNS 264
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR S F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 265 RFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 324
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 362
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 454 TISAAADSDGKSDIAKEFKEKKQEQVQVSPK-ESQSKQSCLTSNRSRTKVQMQGVAVGRA 512
T S AD A F+ VQ S + S + Q ++ R+ KV G VGR+
Sbjct: 668 TTSVVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTPRTFIKVYKSGY-VGRS 726
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 570
LD+T + Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 727 LDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNV 786
Query: 571 KRIFICSSQDVKKM 584
I I S +DV+K+
Sbjct: 787 WYIKILSPEDVQKL 800
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVP 146
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 147 RRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 206
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 207 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 266
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 267 FYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 326
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 327 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 495 SNRSRTKVQMQGVA-VGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 550
SN +RT V++ VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 706 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 765
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 766 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 799
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 201/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNY-FCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 272 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 VRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G VGR LD+T Y L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 780 VKVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 838
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
VGDDPW EF N V I I S Q+V++M PG +L
Sbjct: 839 VGDDPWQEFVNSVSCIKILSPQEVQQMGKPGIEL 872
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 201/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 84 ADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTASDTSTHGGFSV 142
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD NQ P QEL+AKDLHG +W+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 143 PRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTGWSVFVSAKR 202
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 203 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 262
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I + KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 263 IFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 322
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + + RVS WEIEP + P P KRP
Sbjct: 323 VRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL--TTFPMYPSPFALGLKRP 374
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G VGR LD+T YD L E+ +F ++GQL R+ W++V+ D E D++L
Sbjct: 776 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 834
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
VGDDPW EF N V I I S ++V++M PG +L
Sbjct: 835 VGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQL 868
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 200/298 (67%), Gaps = 16/298 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQN-----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
AE +DEVYAQ+TL+PE ++ E D P+ R +SFSK+LT SDTSTHGG
Sbjct: 478 AEAYSDEVYAQVTLVPEVQKDNLCFEEEVNIDQIPS---RNAAYSFSKILTPSDTSTHGG 534
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV +K+A EC PPLDM TP QE+VAKDL+G+EWRF+HI+RGQP+RHLLT+GWS FV
Sbjct: 535 FSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLLTSGWSLFVN 594
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQS--SMPSSVISSQSMHLGVLATASHAVAT 174
+K+LVAGD+ +F+RGE+GEL VG+R A S S SS+IS SM LG+L AS+AV
Sbjct: 595 AKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGILTNASNAVGN 654
Query: 175 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+TMF+VYY+P T+ +FI+ L YL++ + +G R +M+ E E+S RR +GT++G E
Sbjct: 655 RTMFLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEES-LRRLAGTIIGNE 713
Query: 233 DF-SPHWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
D S W S WR LKVQWD P+RV PW IEP ++ V P L K+
Sbjct: 714 DIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQV-PALPTKKK 770
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 481 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 540
V+P ++ K C+ +NRS TKV G A+GRA+DL GY LI EL+ MFD +G L +
Sbjct: 950 VAPGKTCKKCRCV-NNRSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLIS 1008
Query: 541 -RTKWEIVYTDDEGDMMLVGDDPWH 564
+ W + DDEGDMM +GD PW
Sbjct: 1009 GGSGWHVTCLDDEGDMMQLGDYPWQ 1033
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 198/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P SP + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R RQQ+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNK-FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMGTITGISDLDPA 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WE+EP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL--TTFPMYPSPFQLRLKRP 376
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
NR+ KV G + GR+LD+T Y L +EL MF ++G+L R+ W++V+ D E
Sbjct: 761 NRNFVKVYKSG-SFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDREN 819
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 820 DVLLLGDDPWPEFVNSVWCIKILSPQEVQQM 850
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/275 (54%), Positives = 194/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QNE P S +P + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQP-TNYFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 145 PRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F
Sbjct: 205 LVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFT 264
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDP 324
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 763 NKTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDREN 821
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 822 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 852
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 202/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV
Sbjct: 94 ADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSV 152
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 153 PRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 212
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 213 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 272
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 273 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDS 332
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 333 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 384
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 799 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 858
Query: 568 NMVKRIFICSSQDVKKM 584
+ V I I S Q+V++M
Sbjct: 859 STVSCIKILSPQEVQQM 875
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/296 (52%), Positives = 200/296 (67%), Gaps = 10/296 (3%)
Query: 2 AEQETDEVYAQITLLPE-PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL+P P+ + P R F K LTASDTSTHGGFS+
Sbjct: 75 ADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTASDTSTHGGFSIP 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q+ P QEL A+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 135 RRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R + G+L +G+R RQQ+ MPSSV+SS SMH+GVLA A+HA AT + F +
Sbjct: 195 QAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAANHAAATSSRFTI 254
Query: 181 YYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I + KY +A+ + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 255 FYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMGTITGMGDLDPI 314
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W +S WRSLKV WDE + R RVS WEIEP TP L+ PV + KRPR
Sbjct: 315 RWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLLCPPPVAFRTKRPR 367
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKV G +VGR++D+ Y L EL +F++ L RT W++V+ D+E D
Sbjct: 740 RTFTKVHKLG-SVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEND 798
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+LVGDDPW EF N V+ I I S ++++M
Sbjct: 799 TLLVGDDPWEEFVNYVRSIKILSPNEIQQM 828
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/313 (46%), Positives = 203/313 (64%), Gaps = 16/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKV---------HSFSKVLTASDT 51
AE+ +DEVY Q+ L+PE Q + AD H F K LTASDT
Sbjct: 90 AEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTLTASDT 149
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 150 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGW 209
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRGE+GEL +G+R A+ +S S +S Q L +A
Sbjct: 210 SAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSPTSLMDVVNA 269
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ + F ++Y PR +S+FII +++++++++ ++ GMR++MRFE ED+ ERRF+G +V
Sbjct: 270 LSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDAAERRFTGLIV 329
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W S+WR L V+WD+ TR +RVSPWEIEP +++T N + + A KR
Sbjct: 330 GIADVDPVRWPGSRWRCLMVRWDD-LEATRHNRVSPWEIEPSGSASTANNL--MSAGLKR 386
Query: 289 PRLSMEVPPLDLP 301
++ + LD P
Sbjct: 387 TKIGLPSAKLDFP 399
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 202/293 (68%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N++ KV G + GR+LD+T Y+ L EL MF ++G+L R+ W++V+ D E
Sbjct: 774 NKTFVKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDREN 832
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S ++V++M
Sbjct: 833 DVLLLGDGPWPEFVNSVWCIKILSPEEVQQM 863
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/318 (45%), Positives = 197/318 (61%), Gaps = 14/318 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDP-----CPADSPRPKV-----HSFSKVLTASDT 51
AE DEVYAQ++L+P+ Q E C + V H F K LTASDT
Sbjct: 108 AETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTHMFCKTLTASDT 167
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG+EW+F+HI+RGQPRRHLLTTGW
Sbjct: 168 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTGW 227
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++GEL +G+R A+ + + SQ ++ L HA
Sbjct: 228 SAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQLNQSTLTDVVHA 287
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ +++F + Y PR +S+FII L+K+L++++ F+VGMR+KMRFE ED+ ERR+ G +
Sbjct: 288 MSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAERRYMGLIT 347
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR L V+WD+ R RVSPWEIEP + ++ N K R
Sbjct: 348 GISDLDPARWPGSKWRCLVVRWDD-METNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSR 406
Query: 289 PRLSMEVPPLDLPSAASA 306
P +P A
Sbjct: 407 SGFPSSKPEFPVPDGIGA 424
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 198/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P R + F K LTASDTSTHGGFSV
Sbjct: 30 ADAETDEVYAQMTLQPLTLQEQKDAYLPAELGTPSRQPTNYFCKRLTASDTSTHGGFSVP 89
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P+QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 90 RRAAEKVFPPLDFTQQPPSQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 149
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD +F+ E +L +G+R R QS MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 150 VAGDAVIFIWNEKNQLLLGIRRGNRPQSVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTV 209
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L +Y +AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 210 FYXPRASPSEFVIPLTRYAKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDPA 269
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + +RP
Sbjct: 270 RWPNSHWRSIKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLRRP 320
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
+R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E
Sbjct: 722 DRTFVKVHKLG-SYGRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDREN 780
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW EF N V I I S Q+V++M
Sbjct: 781 DVLLLGDDPWQEFVNNVWCIKILSPQEVQQM 811
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 191/271 (70%), Gaps = 5/271 (1%)
Query: 5 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 63
ETDEVYAQ+TL P +Q + T P P R + F K LTASDTSTHGGFSV R+
Sbjct: 90 ETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTASDTSTHGGFSVPRRA 149
Query: 64 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAG 123
A + PPLD +Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAG
Sbjct: 150 AEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 209
Query: 124 DTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYK 183
D+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V+Y
Sbjct: 210 DSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYN 269
Query: 184 PRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWK 239
PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P W
Sbjct: 270 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWP 329
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
+S WRS+KV WDE + R RVS WEIEP
Sbjct: 330 NSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 495 SNRSRTKVQMQGVA-VGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTD 550
SN +RT V++ VGR+LD++ Y L +EL +MF I+GQL R+ W++V+ D
Sbjct: 724 SNPTRTFVKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVD 783
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F N V I I S +D +K+
Sbjct: 784 RENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 817
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 206/315 (65%), Gaps = 18/315 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLTASDT 51
AE+ +DEVY Q+ L+PE Q E + + AD H F K LTASDT
Sbjct: 108 AEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKTLTASDT 167
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 168 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGW 227
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++GEL +G+R A+ +S+ +V S Q ++ L +A
Sbjct: 228 SAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATLKGVVNA 287
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T+ F V Y PR +S+FII ++K+L++++ ++VGMR++MRFE ED+ ERR +G +
Sbjct: 288 LSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERRCTGLIA 347
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAKNK 287
G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+ L K
Sbjct: 348 GISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEIEPSGSASNSSNLMSAGL---K 403
Query: 288 RPRLSMEVPPLDLPS 302
R R+ M L+ P+
Sbjct: 404 RTRIGMTSVKLEFPT 418
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 5/275 (1%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET EVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRTSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 267 IFYNPRPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITCISDLDSER 326
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 327 WPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 361
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 765 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 824
Query: 568 NMVKRIFICSSQDVKKMSPG 587
N V I I S QDV++M G
Sbjct: 825 NSVWCIKILSPQDVQQMVRG 844
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPI 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 387 AHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHATSSAPSEKVPVSSLT 446
A+S TP+P K DT +EQ +C L G NHA A + P L
Sbjct: 617 ANSVSLTPYPGK---DTAVEQ----------ENCSLDGQ---NHALFGANID--PGLLLP 658
Query: 447 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK--ESQSKQSCLTSNRSRTKVQM 504
T I T S AD A F+ +Q S + S ++ T+NR+ KV
Sbjct: 659 TTLSSIGTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTANRTFVKVYK 718
Query: 505 QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDP 562
G +VGR+LD++ Y+ L +EL +MF I+G L R+ W++V+ D E D++L+GD P
Sbjct: 719 SG-SVGRSLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGP 777
Query: 563 WHEFCNMVKRIFICSSQDVKKM 584
W F N V I I S +DV K+
Sbjct: 778 WEAFVNNVWYIKILSPEDVLKL 799
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/293 (52%), Positives = 200/293 (68%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTHGGFSV
Sbjct: 86 ADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSI 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
SN++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 775 SNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 833
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 834 NDVLLLGDGPWPEFVNSVGYIKILSPQEVQQM 865
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 202/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + + +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNY-FCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 272 IFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDS 331
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 383
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ + E D++LVGDDPW EF
Sbjct: 792 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDVLLVGDDPWQEFV 851
Query: 568 NMVKRIFICSSQDVKKM 584
+ V I I S Q+V++M
Sbjct: 852 STVSCIKILSPQEVQQM 868
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/296 (51%), Positives = 196/296 (66%), Gaps = 10/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+ L+P ++ T P + F K LTASDTSTHGGFS+ R
Sbjct: 67 ADLETDEVYAQMVLIPSQDPDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTHGGFSIPR 126
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTSKRL 120
+ A + P LD NQ P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS FV++KRL
Sbjct: 127 RAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSVFVSAKRL 186
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T + F +
Sbjct: 187 QAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQTSSRFTI 246
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV + + VGMR++M FE E+S RR+ GTV G+ D P
Sbjct: 247 FYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTGIGDLDPV 306
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W +S WRSLKV WDE + R RVS WEIEP TP L P+ +++KR R
Sbjct: 307 RWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLT---TPFLSCPPPLASRSKRAR 359
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 242/463 (52%), Gaps = 84/463 (18%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG + +
Sbjct: 87 VDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPK 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTFVTSKR 119
++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F T+KR
Sbjct: 144 QYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKR 203
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T+ MF
Sbjct: 204 LIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFN 263
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
V YKPR M+FEG+D E+R+ GT++GV D SPHWK
Sbjct: 264 VVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDMSPHWK 297
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
DS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 298 DSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH----------- 344
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
W + ++ SN + +
Sbjct: 345 ------------------------------------WLQLNEIGATLSNLWTCQEIGQRS 368
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
+ SP + + + AI+D+K +S HS + P+ + N+D +++ + TE T
Sbjct: 369 MNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATT 426
Query: 419 SCRLFGIELIN-HATSSAPSEKVPVSSLTTEGHIISTISAAAD 460
SC LFG++L H A S V ++++ +I + D
Sbjct: 427 SCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFD 469
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 486 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 545
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 422 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 481
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 482 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 526
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 201/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 72 ADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTASDTSTHGGFSV 130
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 131 PRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 190
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 191 LVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 250
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 251 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 310
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 311 VRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 362
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/307 (51%), Positives = 199/307 (64%), Gaps = 24/307 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLTAS 49
AE ETDEVYAQ+TL+PEP E + +P H F K LTAS
Sbjct: 85 AEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP----HMFCKTLTAS 140
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 141 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTT 200
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLAT 167
GWS FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL+
Sbjct: 201 GWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSA 260
Query: 168 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
A++A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ ERR S
Sbjct: 261 AANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCS 320
Query: 226 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
G + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P L
Sbjct: 321 GVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP--PALNVPRL- 377
Query: 285 KNKRPRL 291
K RP L
Sbjct: 378 KKLRPSL 384
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 628 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 687
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 688 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 721
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/280 (50%), Positives = 187/280 (66%), Gaps = 14/280 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTASDT 51
AE TDEVYAQ++L+PE + AD + H F K LTASDT
Sbjct: 101 AEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDT 160
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTTGW
Sbjct: 161 STHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGW 220
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L +A
Sbjct: 221 SAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNA 280
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G +
Sbjct: 281 ISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLIT 340
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 341 GISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 379
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 200/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET+EVYAQ+TL P Q +P P S +P + F K LTASDTSTHGGFSV
Sbjct: 107 ADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQPTNY-FCKTLTASDTSTHGGFSV 165
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+A DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 166 PRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 225
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 226 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 285
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 286 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDS 345
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 346 VRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 397
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 804 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFA 863
Query: 568 NMVKRIFICSSQDVKKM 584
+ V I I S Q+V++M
Sbjct: 864 STVSCIKILSPQEVQQM 880
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 200/294 (68%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEV AQ+TL P Q +P P + +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADAETDEVCAQMTLQPLSPQELKDPFLPAELGTANKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+AKDLHG EW+F+HIFRGQP+RHLLTTGWS F+++KR
Sbjct: 152 PRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFISAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 212 LVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 272 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 332 ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTIPMYSSPFPMRLKRP 383
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G AVGR LD+T Y L EL +F ++GQL R+ W++V+ D E D++L
Sbjct: 786 VKVYKSG-AVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLL 844
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
VGDDPW EF N V I I S Q+V++M
Sbjct: 845 VGDDPWQEFVNSVSCIKILSPQEVQQM 871
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/307 (51%), Positives = 199/307 (64%), Gaps = 24/307 (7%)
Query: 2 AEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLTAS 49
AE ETDEVYAQ+TL+PEP E + +P H F K LTAS
Sbjct: 85 AEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTP----HMFCKTLTAS 140
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTT
Sbjct: 141 DTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTT 200
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-SVISSQ-SMHLGVLAT 167
GWS FV + LV+GD +FLRG++GEL +G+R + +S +P+ SV+S Q L VL+
Sbjct: 201 GWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWGSQLSVLSA 260
Query: 168 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
A++A+++++MF ++Y PR S+F+I KY+ +N VGMR+KMRFE ED+ ERR S
Sbjct: 261 AANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEMEDAAERRCS 320
Query: 226 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
G + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P L
Sbjct: 321 GVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP--PALNVPRL- 377
Query: 285 KNKRPRL 291
K RP L
Sbjct: 378 KKLRPSL 384
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 194/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P R + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 550
L + R+ KV G +VGR+LD+T Y L EL +MF I+G L R+ W++V+ D
Sbjct: 713 LNATRTFVKVYKSG-SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVD 771
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F N V I I S +DV K+
Sbjct: 772 RENDVLLLGDDPWEAFVNNVWYIKILSPEDVLKL 805
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 192/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQPTNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 264
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 565
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 728 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 787
Query: 566 FCNMVKRIFICSSQDVKKM 584
F N V I I S +DV K+
Sbjct: 788 FVNNVWYIKILSPEDVLKL 806
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K+LTASDTSTHGGFSV
Sbjct: 86 ADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKILTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
+N++ KV G + GR+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 749 TNKTFVKVYKSG-SFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQE 807
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 808 NDVLLLGDGPWPEFVNSVGCIKILSPQEVQQM 839
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 199/294 (67%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 146 PRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 206 LIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 IFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 325
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 777 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 835
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GDDPW EF N V I I S +V++M
Sbjct: 836 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 865
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 202/313 (64%), Gaps = 17/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTASDTS 52
AE +DEVYAQ++L PE Q E + DS V H F K LTASDTS
Sbjct: 101 AEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTS 160
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLTTGWS
Sbjct: 161 THGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWS 220
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 172
FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ + +AV
Sbjct: 221 AFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDVVNAV 280
Query: 173 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR +G + G
Sbjct: 281 SSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTGHITG 340
Query: 231 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA-SATPNLVQPVLAKNKR 288
V D P W S+WRSL V+WD+ R RVSPWEIEP + S + NLV P L KR
Sbjct: 341 VSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPGL---KR 396
Query: 289 PRLSMEVPPLDLP 301
R+ + L+ P
Sbjct: 397 TRIGLSSTKLEFP 409
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 91 ADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSV 149
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 150 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 209
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 210 LVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 269
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 270 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDS 329
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 330 VRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPL 364
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 607
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 201/313 (64%), Gaps = 17/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV---------HSFSKVLTASDTS 52
AE +DEVYAQ++L PE Q E + DS V H F K LTASDTS
Sbjct: 101 AEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTS 160
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A +C PPLD NQ P+QELVAKDL G +W+F+HI+RGQPRRHLLTTGWS
Sbjct: 161 THGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWS 220
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 172
FV KRLV+GD +FLRG +GEL +G+R A+ +S S I SQ ++ + +AV
Sbjct: 221 AFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSSIMDVVNAV 280
Query: 173 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
++++ F V Y PR +SQF++ +K+L+++N+ F+VG+R+++ FE +D +RR +G + G
Sbjct: 281 SSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGADRRHTGHITG 340
Query: 231 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAKNKR 288
V D P W S+WRSL V+WD+ R RVSPWEIEP S + NLV P L KR
Sbjct: 341 VSDVDPIRWPGSRWRSLMVRWDD-GETNRHGRVSPWEIEPSGSVSLSTNLVPPGL---KR 396
Query: 289 PRLSMEVPPLDLP 301
R+ + L+ P
Sbjct: 397 TRIGLSSTKLEFP 409
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 72 ADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSV 130
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 131 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 190
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 191 LVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 250
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 251 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDS 310
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 311 VRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPL 345
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 750 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 808
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 607
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 809 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 848
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 194/307 (63%), Gaps = 25/307 (8%)
Query: 1 MAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHSFSKV 45
+A +ETDEVY Q+TLLP E +E +P H F K
Sbjct: 113 LANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTP----HMFCKT 168
Query: 46 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 105
LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRH
Sbjct: 169 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 228
Query: 106 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 165
LLTTGWS FV+ K LV+GD +FLR ENGEL +G+R AR ++ +P S+I S +L
Sbjct: 229 LLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSS-SIL 287
Query: 166 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 223
+ ++AV+ ++MF V+Y PR S+F+I KY+ ++ N +G R++MRFE +DSPERR
Sbjct: 288 SLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDSPERR 347
Query: 224 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
+G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P L
Sbjct: 348 CAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDP--SGSLPPLSIQS 405
Query: 283 LAKNKRP 289
+ KRP
Sbjct: 406 SPRPKRP 412
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 8/103 (7%)
Query: 481 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 540
S ++S SK+ C TKV QG VGRA+DL+ L GY+ L+ ELE +F+++G L
Sbjct: 628 ASNQQSSSKRIC-------TKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRD 680
Query: 541 RTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
K W I+YTD E DMM+VGDDPWH+FC++V +I + + ++V+
Sbjct: 681 PEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 91 ADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTASDTSTHGGFSV 149
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 150 PRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 209
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R RQQ+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 210 LVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 269
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 270 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDS 329
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 330 VRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPL 364
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 13/110 (11%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G ++GR+LD++ Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 769 VKVYKSG-SLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 607
VGDDPW EF N V I I S Q+V+++ + G D LLSS A
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQL----------VRGGDGLLSSPGA 867
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 197/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-P 236
+Y PR S+F+I L KYL+AV + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 266 FYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGTITGISDLDVV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S+WRS+KV WDE R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPL--TTFPTYPSPFPLRLKRP 376
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E D
Sbjct: 751 RTFVKVYKSG-SFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDREND 809
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GD PW EF N V I I S Q+V++M
Sbjct: 810 VLLLGDGPWPEFVNSVWYIKILSPQEVQQM 839
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 149/275 (54%), Positives = 195/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET+EVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQP-TNYFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDS 326
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 327 ERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 765 VKVYKSG-SLGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 823
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 604
VGDDPW EF N V I I S QDV++M G + S G +L SS
Sbjct: 824 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGG-DLLSAPGARMLQSS 869
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/294 (51%), Positives = 199/294 (67%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P P + + P SP + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD Q P QEL+A+DLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 146 PRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+AGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 206 LIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 IFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 325
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 377
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ KV G + GR+LD+T YD L EL MF ++G+L R+ W++V+ D E D
Sbjct: 680 RTFVKVHKLG-SFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDREND 738
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GDDPW EF N V I I S +V++M
Sbjct: 739 VLLLGDDPWQEFVNNVWYIKILSPLEVQQM 768
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 196/275 (71%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET+EVYAQ+TL P Q +P P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQP-TNYFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDS 326
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 327 ERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPL 361
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G ++GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++L
Sbjct: 766 VKVYKSG-SLGRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDVLL 824
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSS 604
+GDDPW EF N V I I S QD+++M+ G + S G +L S
Sbjct: 825 LGDDPWQEFVNSVGCIKILSPQDLQQMARGGGGDLLSAPGARMLQGS 871
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 452 ISTISAAADSD----GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGV 507
ST S AD G S Q+ ++ P Q L+ R+ KV G
Sbjct: 678 FSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVDPPTLS--RTFVKVYKLG- 734
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 565
+VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 735 SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEA 794
Query: 566 FCNMVKRIFICSSQDVKKM 584
F N V I I S +DV+KM
Sbjct: 795 FVNNVWYIKILSPEDVQKM 813
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 511
+T SA D+ F+ VQ S + QS N++RT V++ + +VGR
Sbjct: 670 TTASAEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGR 729
Query: 512 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 569
+LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N
Sbjct: 730 SLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 789
Query: 570 VKRIFICSSQDVKKM 584
V I I S +D+ KM
Sbjct: 790 VWYIKILSPEDIHKM 804
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVP 146
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 147 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 206
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +
Sbjct: 207 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTI 266
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 267 FYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 326
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 327 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 551
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 716 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 774
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 775 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 808
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 188/281 (66%), Gaps = 15/281 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPK----------VHSFSKVLTASD 50
AE TDEVYAQ++L+PE Q + AD + H F K LTASD
Sbjct: 104 AEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASD 163
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTTG
Sbjct: 164 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTG 223
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L +
Sbjct: 224 WSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVN 283
Query: 171 AVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
A++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G +
Sbjct: 284 AISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLI 343
Query: 229 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
G+ D P W SKWR L V+WD+ R +RVSPWEIE
Sbjct: 344 TGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIE 383
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 203/315 (64%), Gaps = 18/315 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLTASDT 51
AE+ +DEVY Q+ L+PE Q E + + AD H F K LTASDT
Sbjct: 99 AEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKTLTASDT 158
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 159 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGW 218
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG +GEL +G+R A+ + + +V S Q ++ L +A
Sbjct: 219 SAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATLMDVVNA 278
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T+ F V Y PR + FII ++K+LE+++ ++VGMR++MRFE ED+ +RRF+G +
Sbjct: 279 LSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRRFTGLIA 338
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAKNK 287
G+ D P W SKWR L V+WD+ R +RVSPWEIEP AS + NL+ L K
Sbjct: 339 GISDVDPVRWPGSKWRCLLVRWDD-IEAARHNRVSPWEIEPSGSASNSSNLMAAGL---K 394
Query: 288 RPRLSMEVPPLDLPS 302
R R+ M L+ P+
Sbjct: 395 RNRIEMTSAKLEFPN 409
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 456 SAAADSDGKSDIAKE--FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGRA 512
+A+ADSD + E F+ Q S + QS N++RT V++ + +VGR+
Sbjct: 675 TASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRS 734
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 570
LD++ Y L +EL +MF I+G+L R+ W++V+ D E D++L+GDDPW F N V
Sbjct: 735 LDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNV 794
Query: 571 KRIFICSSQDVKKM----------SPGSKL 590
I I S +D+ KM SPG +L
Sbjct: 795 WYIKILSPEDIHKMGEQALESLGPSPGQRL 824
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFSV
Sbjct: 86 ADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 765 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 823
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 824 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 854
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/321 (46%), Positives = 203/321 (63%), Gaps = 36/321 (11%)
Query: 1 MAEQETDEVYAQITLLP---------EPSQNEPTTPD-----PCPADSPRPKVHSFSKVL 46
+A +E DEVY Q+TLLP E + E D PA S H F K L
Sbjct: 104 LANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKS---TPHMFCKTL 160
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
TASDTSTHGGFSV R+ A +C PPL P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 161 TASDTSTHGGFSVPRRAAEDCFPPLQ----RPSQELVAKDLHGVEWKFRHIYRGQPRRHL 216
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV+ K+LV+GD +FLRGENGEL +G+R AR ++ +P S++ +QS + L+
Sbjct: 217 LTTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLS 276
Query: 167 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
+ ++A++ ++MF V+Y PR S F++ +KY+ ++ N VG R+KM+F+ ++SPERR
Sbjct: 277 SVANAISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPERRS 336
Query: 225 ----------SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVAS 273
SG V G+ D P+ W SKWR L V+WDE DRVSPWE++P AS
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDP-SAS 395
Query: 274 ATPNLVQPVLAKNKRPRLSME 294
+P +Q + K+PR +E
Sbjct: 396 LSPLSIQ-ASRRLKKPRTDLE 415
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK- 543
ES S+ T+ RS TKV QG VGRA+DL+ L Y+ L+ ELE +F ++G L K
Sbjct: 631 ESTSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKG 690
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
W ++YTD E D+M+VGDDPWHEFCN+V +I I + ++V+KM+ G
Sbjct: 691 WRVLYTDRENDIMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIG 734
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTHGGFSV
Sbjct: 88 ADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 148 RRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 208 VAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 267
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 268 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPS 327
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 328 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 487 QSKQSCLTSN-RSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRT 542
QS ++ T N +S T V++ + + GR+LD++ Y L EL MF ++GQL R+
Sbjct: 739 QSSENLGTENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRS 798
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
W++V+ D E D++L+GDDPW EF + V I I S Q+V++M
Sbjct: 799 GWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 840
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 193/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 117 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVP 176
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 177 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 236
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 237 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 296
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 297 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 356
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 357 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 554
R+ KVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYIKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 193/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 117 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVP 176
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 177 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 236
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 237 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 296
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 297 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 356
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 357 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 793 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 888
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 197/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 775 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 833
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 834 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 863
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 230/429 (53%), Gaps = 83/429 (19%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
++ TDEVYAQI+L+P+ ++ D+ RP V+ FSK+LTASD S GG + +
Sbjct: 87 VDKNTDEVYAQISLMPDTTE---VMTHNTTMDTRRPIVYFFSKILTASDVSLSGGLIIPK 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT--GWSTFVTSKR 119
++A EC PPLDM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+ GWS F T+KR
Sbjct: 144 QYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKR 203
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+ GD FV LRGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T+ MF
Sbjct: 204 LIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFN 263
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
V YKPR M+FEG+D E+R+ GT++GV D SPHWK
Sbjct: 264 VVYKPR--------------------------MQFEGKDFSEKRYDGTIIGVNDMSPHWK 297
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD 299
DS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L K K
Sbjct: 298 DSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSLKKKKH----------- 344
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
W + ++ SN + +
Sbjct: 345 ------------------------------------WLQLNEIGATLSNLWTCQEIGQRS 368
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPA-HSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
+ SP + + + AI+D+K +S HS + P+ + N+D +++ + TE T
Sbjct: 369 MNSP-ISVPEFSYPNAIEDSKFLSGLLLNHSLLAIPNENY-NSDQMIQPRKEDITTEATT 426
Query: 419 SCRLFGIEL 427
SC LFG++L
Sbjct: 427 SCLLFGVDL 435
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 192/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 114 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLRGSKHPTEFFCKTLTASDTSTHGGFSVP 173
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 174 RRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 233
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 234 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 293
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 294 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 353
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 354 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L + W++VY D E D
Sbjct: 792 RTYTKVQKTG-SVGRSIDVTSFRDYEELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 850
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 851 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 887
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 193/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 105 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVP 164
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 165 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 224
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 225 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 284
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 285 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 344
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 345 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 781 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 839
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 840 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMKL 876
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPT 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 797 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 855
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
+GDDPW EF + V I I S Q+V++M
Sbjct: 856 LGDDPWPEFVSSVWCIKILSPQEVQQM 882
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 496 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
N+++T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 714 NQTQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 773
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW F N V I I S +D++KM
Sbjct: 774 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 805
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/272 (52%), Positives = 193/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 106 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTSTHGGFSVP 165
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 166 RRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 225
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 226 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 285
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 286 FYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 345
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 346 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTK-WEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L H ++ W++VY D E D
Sbjct: 782 RTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 840
Query: 555 MMLVGDDPW 563
++LVGDDPW
Sbjct: 841 VLLVGDDPW 849
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 199/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + P P R + F K LTASDTSTHGGFSV
Sbjct: 88 ADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTASDTSTHGGFSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 148 RRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 208 VAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 267
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 268 FYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPT 327
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 328 RWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 799 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 857
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
+GDDPW EF + V I I S Q+V++M
Sbjct: 858 LGDDPWPEFVSSVWCIKILSPQEVQQM 884
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 199/317 (62%), Gaps = 13/317 (4%)
Query: 2 AEQETDEVYAQITLLPEP---------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTS 52
AE TD+V+AQ++L+PE + + + A H F K LTASDTS
Sbjct: 96 AESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCKTLTASDTS 155
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS
Sbjct: 156 THGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWS 215
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAV 172
FV K+LV+GD +FLRG++GEL +G+R A+ +SS + SQ ++ + +AV
Sbjct: 216 AFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNYSTVTDVVNAV 275
Query: 173 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
+T+ F VYY PR +S+FII K+L ++++ F+ GMR+KMRFE ED+ ERR++G + G
Sbjct: 276 STKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAERRYTGLITG 335
Query: 231 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
+ P W SKW+ L V+WD+ ++ RVSPWEIEP + ++ + + K R
Sbjct: 336 IGALDPIRWPGSKWKCLVVRWDD-IDTSKHGRVSPWEIEPSGSVSSSHSLMGTGLKRSRI 394
Query: 290 RLSMEVPPLDLPSAASA 306
LS P +P+ A
Sbjct: 395 GLSATKPEFPVPNGNGA 411
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/298 (51%), Positives = 203/298 (68%), Gaps = 16/298 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTASDTSTHG 55
A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTASDTSTHG
Sbjct: 75 ADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTASDTSTHG 130
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 131 GFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFV 190
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 191 SAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAAHAAATN 250
Query: 176 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+ F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 251 SRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYMGTITGIG 310
Query: 233 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
D P W +S W+S+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 311 DLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 366
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 744 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 803
Query: 566 FCNMVKRIFICSSQDVKKMSP-GSKLP 591
F N V I I S +V++M G LP
Sbjct: 804 FVNSVWYIKILSPLEVQQMGKQGLDLP 830
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/307 (47%), Positives = 194/307 (63%), Gaps = 25/307 (8%)
Query: 1 MAEQETDEVYAQITLLP---------------EPSQNEPTTPDPCPADSPRPKVHSFSKV 45
+A +ETDEVY Q+TLLP E +E +P H F K
Sbjct: 120 LANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTP----HMFCKT 175
Query: 46 LTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 105
LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRH
Sbjct: 176 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 235
Query: 106 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 165
LLTTGWS FV+ K L +GD +FLR E GEL +G+R AR ++ +P S+I S +L
Sbjct: 236 LLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NIL 294
Query: 166 ATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 223
+ ++AV+T++MF V+Y PR ++F+I KY+ ++ N +G R++MRFE +DSPERR
Sbjct: 295 SLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDSPERR 354
Query: 224 FSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
+G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P + + P+L
Sbjct: 355 CAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSI--SLPHLSIQS 412
Query: 283 LAKNKRP 289
+ KRP
Sbjct: 413 SPRPKRP 419
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 483 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 542
P E+ + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 654 PVETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDPE 713
Query: 543 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 714 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 761
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 193/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+P P S +P + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 146 PRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 205
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 206 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 265
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
+++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 266 IFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 325
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 360
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 708 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 766
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 767 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 803
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/277 (53%), Positives = 195/277 (70%), Gaps = 7/277 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET EVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 81 ADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSV 139
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 140 PRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 199
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 200 LVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 259
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 260 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITCISDLDS 319
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 320 ERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 356
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 760 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 819
Query: 568 NMVKRIFICSSQDVKKMSPG 587
N V I I S QDV++M G
Sbjct: 820 NSVWCIKILSPQDVQQMVRG 839
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/277 (53%), Positives = 195/277 (70%), Gaps = 7/277 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET EVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITCISDLDS 326
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 327 ERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 767 GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 826
Query: 568 NMVKRIFICSSQDVKKMSPG 587
N V I I S QDV++M G
Sbjct: 827 NSVWCIKILSPQDVQQMVRG 846
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 96 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 154
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 155 PRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 214
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 215 LVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 274
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 275 IFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 334
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 335 VRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 730 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 788
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 789 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 829
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/298 (51%), Positives = 203/298 (68%), Gaps = 16/298 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PAD----SPRPKVHSFSKVLTASDTSTHG 55
A+ ETDEVYAQ+TL P Q + D C PA+ S +P + F K LTASDTSTHG
Sbjct: 88 ADVETDEVYAQMTLQPLTPQEQK---DVCLLPAELGTLSKQPSNY-FCKTLTASDTSTHG 143
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R+ A + PPLD +Q P QEL+ KDLHG EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 144 GFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFV 203
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
++KRLVAGD+ +F+ EN +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT
Sbjct: 204 SAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAAAHAAATN 263
Query: 176 TMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+ F +++ PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+
Sbjct: 264 SRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESSIRRYMGTITGIG 323
Query: 233 DFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
D P W +S W+S+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 324 DLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRP 379
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
+ GR+LD++ Y+ L EL MF ++G L R+ W++V+ D E D++L+GDDPWHE
Sbjct: 757 SFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLLGDDPWHE 816
Query: 566 FCNMVKRIFICSSQDVKKMSP-GSKLP 591
F N V I I S +V++M G LP
Sbjct: 817 FVNSVWYIKILSPLEVQQMGKQGLDLP 843
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVP 146
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 147 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 206
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 207 VAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 266
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ + D P
Sbjct: 267 FFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPV 326
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 327 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQM-QGVAVGR 511
+T SA AD+ F+ +Q S + QS N++ V++ + +VGR
Sbjct: 669 TTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGR 728
Query: 512 ALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 569
+LD++ Y L +EL +MF I+G+ R+ W++V+ D E D++L+GDDPW F N
Sbjct: 729 SLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNN 788
Query: 570 VKRIFICSSQDVKKM 584
V I I S +D++KM
Sbjct: 789 VWYIKILSPEDIQKM 803
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 199/295 (67%), Gaps = 11/295 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFS 58
A+ ETDEVYAQ+TL P Q + PAD S + + F K LTASDTSTHGGFS
Sbjct: 86 ADVETDEVYAQMTLQPLNPQEQKDAF--LPADLGTSGKQPTNYFCKTLTASDTSTHGGFS 143
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 144 VPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 203
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 204 RLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRF 263
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 264 TIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 323
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 324 PVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
+ GR+L++T Y L EL MF ++GQL R+ W+++Y D + D++L+GDDPW +
Sbjct: 791 SFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPD 850
Query: 566 FCNMVKRIFICSSQDVKKM 584
F I I S Q++++M
Sbjct: 851 FVKNASCIKILSPQELQQM 869
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/277 (53%), Positives = 195/277 (70%), Gaps = 7/277 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ET EVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 88 ADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNY-FCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITCISDLDS 326
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W +S WRS+KV WDE + + RVS WEIEP +A
Sbjct: 327 ERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA 363
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 94 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 152
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 153 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 212
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 213 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 272
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 273 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 332
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 333 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 814
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 94 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 152
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 153 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 212
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 213 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 272
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 273 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 332
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 333 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 199/294 (67%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 267 IFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 326
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 327 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 378
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 14/104 (13%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 555
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKM---------SPGSKL 590
+L+GDDPW EF N V I I S +V++M +PG KL
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPGDKL 865
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 194/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 89 ADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 148
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 149 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSIFVSAKRL 208
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 209 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHASATNSCFTV 268
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D +
Sbjct: 269 FYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAV 328
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W++S WRS+KV WDE + R RVS WEIEP
Sbjct: 329 RWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 362
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
Query: 487 QSKQSCLTSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTK 543
Q+ + T N++ T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+
Sbjct: 711 QNAEQIDTQNQNPTFVKVYKSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPLRSG 770
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
W++V+ D E D++L+GDDPW F N V I I S +D++KM
Sbjct: 771 WQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 811
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 212 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 272 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 332 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 190/274 (69%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+ E +L +G++ R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 IAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS-P 236
+Y PR S+FII L KYL+AV + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 266 FYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDVA 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 326 RWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPL 359
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 777 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 835
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 836 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 866
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 212 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 272 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 332 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 718 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 776
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 777 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 817
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 212 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 272 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 332 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 720 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 778
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 779 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 819
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 93 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 151
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 152 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSIFVSAKR 211
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 212 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 271
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 272 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 331
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 332 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 717 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 775
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 776 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 816
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/293 (51%), Positives = 198/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFSV
Sbjct: 71 ADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVP 130
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 131 RRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 190
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 191 VAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFTI 250
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L KY++AV + + +VGMR++M FE +S RR+ GT+ G+ D P
Sbjct: 251 FFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGTITGISDLDPV 310
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W++S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 311 RWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 361
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 750 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 808
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 809 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 839
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 197/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 206 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 376
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 191/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 92 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 150
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 151 PRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 210
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 211 LVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 270
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 271 IFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 330
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 331 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 553 GDMMLVGDDPW 563
D++L+GDDPW
Sbjct: 775 NDVLLLGDDPW 785
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/277 (53%), Positives = 192/277 (69%), Gaps = 6/277 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 74 ADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLTASDTSTHGGFSVP 133
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 134 RRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 193
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 194 VAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 253
Query: 181 YYKPR---TSQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G D P
Sbjct: 254 FYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRYMGTITGTSDLDP 313
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
W +S WRS+KV WDE + R RVS WEIEP +
Sbjct: 314 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTS 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 551
T +R+ KV G +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 693 TPSRTFVKVYKSG-SVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDR 751
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F N V I I S +DV KM
Sbjct: 752 ENDVLLLGDDPWELFVNNVWYIKILSPEDVLKM 784
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 192/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTV 264
Query: 181 YYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Query: 494 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 550
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 551 DEGDMMLVGDDPW 563
E D++L+GDDPW
Sbjct: 760 KENDILLLGDDPW 772
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 192/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 71 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 129
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 130 PRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 189
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 190 LVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 249
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 250 IFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 309
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 310 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 344
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 694 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 752
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 753 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 793
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 191/275 (69%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 92 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 150
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 151 PRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 210
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 211 LVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 270
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 271 IFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 330
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 331 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 365
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 716 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 774
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 775 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 811
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/296 (53%), Positives = 201/296 (67%), Gaps = 11/296 (3%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+ LLP + S+ E + +P + F K LTASDTSTHGGFS+
Sbjct: 72 ADPETDEVYAQMILLPIQISEKEALLSPDLEVVNKQPTEY-FCKTLTASDTSTHGGFSIP 130
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 131 RRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTTGWSVFVSAKRL 190
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R + G L +G+R RQQ+ MPSSV+SS SMH GVLA ASHA AT + F +
Sbjct: 191 QAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAASHAAATSSRFKI 250
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A+ N +F VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 251 FYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVGTITGLGDLDPI 310
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W S WRSLKV WDE + R RVS WEIEP TP L+ P+ ++KRPR
Sbjct: 311 RWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPL---TTPFLLCPPPLALRSKRPR 363
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/311 (46%), Positives = 196/311 (63%), Gaps = 33/311 (10%)
Query: 1 MAEQETDEVYAQITLLP-------------------EPSQNEPTTPDPCPADSPRPKVHS 41
+A ++TDEVY Q+TLLP E +N ++ P H
Sbjct: 125 LANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTP--------HM 176
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
F K LTASDTSTHGGFSV R+ A +C PLD Q P+QEL+AKDLHG EW+F+HI+RGQ
Sbjct: 177 FCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQ 236
Query: 102 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 161
PRRHLLTTGWS FV+ K LV+GD +FLR E GEL +G+R AR ++ +P S+I S
Sbjct: 237 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS 296
Query: 162 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
+L+ ++AV+T++MF V+Y PR ++F+I KY+ ++ + +G R++MRFE +DS
Sbjct: 297 -NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDS 355
Query: 220 PERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
PERR +G V GV D P+ W +SKWR L V+WDE +RVSPWEI+P V + P+L
Sbjct: 356 PERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSV--SLPHL 413
Query: 279 VQPVLAKNKRP 289
+ KRP
Sbjct: 414 SIQSSPRPKRP 424
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 483 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 542
P E+ + + +S R TKV QG VGRA+DL+ L GYD L+ ELE +F+++G L
Sbjct: 651 PVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPE 710
Query: 543 K-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
K W I+YTD E DMM+VGDDPWH+FCN+V +I + + ++V+ + +K
Sbjct: 711 KGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNK 758
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/296 (50%), Positives = 194/296 (65%), Gaps = 10/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETD+VYAQ+ L+P + T P + F K LTASDTSTHGGFS+ R
Sbjct: 101 ADLETDDVYAQMVLIPTQDPEKETMLLPDVVVQNKQPTEYFCKTLTASDTSTHGGFSIPR 160
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR-GQPRRHLLTTGWSTFVTSKRL 120
+ A + P LD Q P QELVA+DLH +W F+HI+R GQPRRHLLTTGWS F+++KRL
Sbjct: 161 RAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSIFISAKRL 220
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R + G+L +G+R R Q+ MPSSV+SS SMH+G+LA ASHA T + F +
Sbjct: 221 QAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAAASHAAQTSSRFTI 280
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I KY +AV + + VGMR++M FE E+S RR+ GTV G+ D P
Sbjct: 281 FYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRYMGTVTGIGDLDPV 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W +S WRSLKV WDE + R RVS WEIEP TP L+ P++ ++KR R
Sbjct: 341 RWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL---TTPFLICPPPIVLRSKRAR 393
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 192/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTV 264
Query: 181 YYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 494 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 550
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 551 DEGDMMLVGDDPWHEF 566
E D++L+GDDPW +
Sbjct: 760 KENDILLLGDDPWEYY 775
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/302 (50%), Positives = 202/302 (66%), Gaps = 8/302 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK-VHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTHGGFSV
Sbjct: 76 ADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKTLTASDTSTHGGFSVP 135
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P+QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 136 RRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 195
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD+ +F+ E +L +G+R AR Q+ MP SV+SS SMH+G+LA A+HA AT + F V
Sbjct: 196 VTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAAAAHAAATNSRFTV 255
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+ISL KY++AV + +VGMR++M FE E+S RR+ GT+ + D P
Sbjct: 256 FYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDPV 315
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
W +S WRS+KV WDE + R RVS WEIEP + P+ + KRP L E+
Sbjct: 316 RWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFPL--RLKRPWLP-EMS 372
Query: 297 PL 298
PL
Sbjct: 373 PL 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G VGR+LD+ Y+ L DEL +MF ++G L R+ W++V D E D++L
Sbjct: 689 VKVYKSG-CVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILL 747
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
+GDDPW F N V I I S QDV++M
Sbjct: 748 MGDDPWEAFVNSVWSIKILSPQDVQQM 774
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 192/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTV 264
Query: 181 YYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 494 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 550
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 700 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 759
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F N V I I S +DV +M
Sbjct: 760 KENDILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 192/274 (70%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 107 ADKETDEIYAQMSLQPVNSEKDVF---PIPDFGLKPNKHPTEFFCKTLTASDTSTHGGFS 163
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD + PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV +K
Sbjct: 164 VPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSMFVGAK 223
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 224 RLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSTF 283
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L K+ ++V N + +VGMR+ M FE E+S +RR+ GT+ G+ D
Sbjct: 284 TIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYMGTISGISDLD 343
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR L+V+WDEP + +RVSPWE+E
Sbjct: 344 PLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH-TR-TKWEIVYTDDEGD 554
R+ TK+Q G +VGR++D++ Y+ L E+E MF ++G L+ TR + W++VY D E D
Sbjct: 817 RTYTKIQKTG-SVGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVDFEND 875
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW EF V+ I I S +V++M
Sbjct: 876 VLLVGDDPWEEFVGCVRCIRILSPTEVQQM 905
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 193/277 (69%), Gaps = 11/277 (3%)
Query: 2 AEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ ETDEVYAQ+TL P EP ++ P+ P + F K LTASDTSTHGGF
Sbjct: 83 ADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQP---TNYFCKTLTASDTSTHGGF 139
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S+ R+ A + P LD Q P QEL+A+DLH EW+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 140 SIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTTGWSVFVSA 199
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD+ +F+R + G+L +G+R R Q MPSSV+SS SMH+GVLA A+HA +T
Sbjct: 200 KRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAAHAASTNCR 259
Query: 178 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR S+F++ L K+ +AV + + ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 260 FTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMGTITGIGDL 319
Query: 235 SPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P+ W++S+WRS+KV WDE + R RVS WEIEP
Sbjct: 320 DPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPL 356
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKV G +VGR+LD+T GY L EL+ MF ++GQL R+ W++V+ D E D
Sbjct: 792 RTFTKVYKLG-SVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVDKEKD 850
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N V+ I I S +V +MS
Sbjct: 851 VLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 193/275 (70%), Gaps = 10/275 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTSTHGGF 57
A++++DE+YAQ++L P S+ + P P S P F K LTASDTSTHGGF
Sbjct: 117 ADKDSDEIYAQMSLQPVHSERD-VFPVPDFGMLRGGSKHP-TEFFCKTLTASDTSTHGGF 174
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV S
Sbjct: 175 SVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGS 234
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T
Sbjct: 235 KRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTP 294
Query: 178 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F+++Y PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D
Sbjct: 295 FLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDL 354
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 355 DPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L + W++VY D E D
Sbjct: 794 RTYTKVQKTG-SVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESD 852
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 853 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 883
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/314 (47%), Positives = 200/314 (63%), Gaps = 17/314 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC-PADSPRPKV---------HSFSKVLTASDT 51
AE+ +DEVY Q+ L+PE Q E + AD+ H F K LTASDT
Sbjct: 108 AEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMFCKTLTASDT 167
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 168 STHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQPRRHLLTTGW 227
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRGE+GEL +G+R + +SS +S + G L +A
Sbjct: 228 SAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQLDPGSLMDVVNA 287
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ ++ F V Y PR +S+FII +NK+L++++ ++ GMR++MRFE ED+ ERRF+G +
Sbjct: 288 LSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERRFTGLIA 347
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP-FVASATPNLVQPVLAKNK 287
G+ D P W SKW+ L V+WD+ + +RVSPWEIEP AS + NL+ L K
Sbjct: 348 GISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAASL---K 404
Query: 288 RPRLSMEVPPLDLP 301
R R+ L+ P
Sbjct: 405 RTRIGFTSAKLEFP 418
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 192/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTV 264
Query: 181 YYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 551
T ++ KV G +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 696 TQTKNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 754
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
E D++L+GDDPW F N V I I S +DV++M
Sbjct: 755 ENDILLLGDDPWESFVNNVWYIKILSPEDVQQMG 788
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 192/272 (70%), Gaps = 5/272 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPT-TPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + F K LTASDTSTHGGFSV
Sbjct: 105 ADKDSDEIYAQMSLQPVHSERDVLPVPDLGLLRGSKHPSEYFCKTLTASDTSTHGGFSVP 164
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 165 RRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 224
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 225 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 284
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR ++F+I L KY +A+ ++ +VGMR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 285 FFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIVGISDLDPL 344
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 345 RWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 5/92 (5%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK---WEIVYTDDEG 553
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L TR K W++VY D E
Sbjct: 730 RTYTKVQKTG-SVGRSIDVTSFRDYEELKTAIECMFGLEG-LLTRPKTSGWKLVYVDYES 787
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 788 DVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+R E +L +G+R R Q+ +PSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 205 VAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTV 264
Query: 181 YYKPRTSQ--FIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
++ PR SQ F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 324
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 325 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 495 SNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDD 551
SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 734 SNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDK 793
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
E D++L+GDDPW F + V I I S +DV++M
Sbjct: 794 ENDILLLGDDPWESFVSNVWYIKILSPEDVQEM 826
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 199/294 (67%), Gaps = 9/294 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q +P P + +P + F K LTASDTSTHGGFSV
Sbjct: 94 ADPETDEVYAQMTLQPLNPQELKDPYLPAELGTANKQP-TNYFCKTLTASDTSTHGGFSV 152
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD P QEL AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 153 PRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 212
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ ++ +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F
Sbjct: 213 LVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFT 272
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S +F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D +
Sbjct: 273 IFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDA 332
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 333 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPTPFPLRLKRP 384
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 787 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 846
Query: 568 NMVKRIFICSSQDVKKM 584
N V I I S Q+V++M
Sbjct: 847 NSVFCIKILSPQEVQQM 863
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/276 (53%), Positives = 195/276 (70%), Gaps = 8/276 (2%)
Query: 2 AEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
A+ ETDEVYAQ+TL P E ++ P S +P + F K LTASDTSTHGGFS
Sbjct: 71 ADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNY-FCKTLTASDTSTHGGFS 129
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 130 VPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 189
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 190 RLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRF 249
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PRT S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 250 TIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 309
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 310 PARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 199/294 (67%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P P + + P +P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQPTNYFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 147 PRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S R+ GT+ G+ D P
Sbjct: 267 IFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYMGTITGISDLDP 326
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + +RP
Sbjct: 327 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFPLRLRRP 378
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH----TRTKWEIVYTDDEGDM 555
KV G + GR+LD++ YD LI EL MF ++GQL R+ W++V+ D E D+
Sbjct: 763 VKVHKSG-SFGRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
+L+GDDPW EF N V I I S +V++M G
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKG 853
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 193/275 (70%), Gaps = 7/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 90 ADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQP-TNYFCKTLTASDTSTHGGFSV 148
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD + P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 149 PRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 208
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 209 LVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 268
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR S+FII L KY+++V + + +VGMR++M FE E+S RR+ GT+ + D S
Sbjct: 269 IFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDS 328
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + + RVS WEIEP
Sbjct: 329 ARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPL 363
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 11/100 (11%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 769 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 828
Query: 568 NMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSDSA 607
N V I I S Q+V++M G GE +L S+ A
Sbjct: 829 NSVGCIKILSPQEVQRMVRG---------GEGLLSSAPGA 859
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/371 (44%), Positives = 223/371 (60%), Gaps = 31/371 (8%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P Q EP P A S +P + F K LTASDTSTHGGFSV
Sbjct: 129 ADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNY-FCKTLTASDTSTHGGFSV 187
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KR
Sbjct: 188 PRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 247
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 248 LVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 307
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-S 235
++Y PR+ S+F+I L KY+++V + + +VGMR++M FE E+S RR+ GTV + D S
Sbjct: 308 IFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMGTVTAISDLDS 367
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
W +S WRS+KV WDE + + RVS WEIEP + +
Sbjct: 368 VRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT--------------------TFPM 407
Query: 296 PPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS 355
P P PW++ L H + V +D + + W + +SNF S
Sbjct: 408 YPTAFPLRLKRPWASGLPSMHGMFN-GVKNDDFARYSSLMWLGNGDRGTQSSNFQGLGVS 466
Query: 356 DGEWLTSPRVK 366
WL PR++
Sbjct: 467 --PWL-QPRIE 474
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L ELE +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 813 GRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFV 872
Query: 568 NMVKRIFICSSQDVKKM 584
N V I I S QDV +M
Sbjct: 873 NSVWCIKILSPQDVHQM 889
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 158/200 (79%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ++DEVYAQI L PE QNE T+ D P + + HSF K LTASDTSTHGGFSVLR
Sbjct: 85 AEADSDEVYAQIMLQPEADQNELTSLDAEPQEREKCTAHSFCKTLTASDTSTHGGFSVLR 144
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA ECLP LDM+Q+ P QELVAKDLHG EW F+HIFRGQP+RHLLTTGWS FV+SKRLV
Sbjct: 145 RHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSVFVSSKRLV 204
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
+GD F+F+RGENGEL VGVR L RQ +SMPSSVISS SMHLGVLATASHA++T T+F V+
Sbjct: 205 SGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAISTGTLFSVF 264
Query: 182 YKPRTSQFIISLNKYLEAVN 201
YKPR ++ L L+ +
Sbjct: 265 YKPRFDVVLLYLYICLQCTS 284
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 204/332 (61%), Gaps = 14/332 (4%)
Query: 2 AEQETDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASD 50
A+ TDEVYAQ++L+ E E C + P H F K LTASD
Sbjct: 96 ADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASD 155
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLTTG
Sbjct: 156 TSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTG 215
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS F+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+ +H
Sbjct: 216 WSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAH 275
Query: 171 AVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
AVA +++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G +
Sbjct: 276 AVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGII 335
Query: 229 VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
+G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 336 IGSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLK 394
Query: 289 PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P + LP+ + + A A+ H + Q
Sbjct: 395 SCFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 426
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/276 (52%), Positives = 195/276 (70%), Gaps = 8/276 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFS 58
A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K LTASDTSTHGGFS
Sbjct: 90 ADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFS 148
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 149 VPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 208
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 209 RLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAAATNSRF 268
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 269 TIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 328
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 329 PVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 364
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 772 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 830
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-----SPGSKLP 591
D++L+GDDPW EF N V I I S +V++M SP + +P
Sbjct: 831 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKEGLSPAASVP 874
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 202/328 (61%), Gaps = 14/328 (4%)
Query: 6 TDEVYAQITLLP-----EPSQNEPTTPDPCPADS------PRPKVHSFSKVLTASDTSTH 54
TDEVYAQ++L+ E E C + P H F K LTASDTSTH
Sbjct: 40 TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R+ A +C PPLD + P QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
+ K+LV+GD +FLRGE+GEL +GVR A+ +++ P + +Q + L+ +HAVA
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219
Query: 175 QTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVE 232
+++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++G
Sbjct: 220 KSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSR 279
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
+ P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 280 EADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKSCFP 338
Query: 293 MEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P + LP+ + + A A+ H + Q
Sbjct: 339 QVNPDIVLPNGSVSSDFAESARFHKVLQ 366
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/315 (51%), Positives = 204/315 (64%), Gaps = 20/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPK---VHSFSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P Q + D C PA+ P + F K LTASDTSTHGG
Sbjct: 87 ADVETDEVYAQMTLQPLSPQEQK---DVCLLPAELGIPSKLPTNYFCKTLTASDTSTHGG 143
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + PPLD +Q P QEL+AKDLHG EW+ +HIFRGQP+RHLLTTGWS FV+
Sbjct: 144 FSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLLTTGWSVFVS 203
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRLVAGD +F+ EN +L +G+R R Q+ MP SV+SS SMH+G+LA A+HA AT T
Sbjct: 204 AKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAAAAHATATNT 263
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR S+F+I L KY +AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 264 RFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISD 323
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 324 LDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSPFSLRLKRPW-- 379
Query: 293 MEVPPLDLPSAASAP 307
P LPS P
Sbjct: 380 ----PSGLPSLPGFP 390
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 203/331 (61%), Gaps = 17/331 (5%)
Query: 2 AEQETDEVYAQITLLP----------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEVYAQ++L+ E E PA P H F K LTASDT
Sbjct: 96 ADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIP----HMFCKTLTASDT 151
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 152 STHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGW 211
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S F+ K+LV+GD +FLRGE+GEL +GVR A+ ++ P + +Q L+ +HA
Sbjct: 212 SGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSLSEVAHA 271
Query: 172 VATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
VA +++F +YY PR SQ FII K++ + + F+VGMR+K+R+E ED+ ERR +G ++
Sbjct: 272 VAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIII 331
Query: 230 GVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
G + P W SKW+ L V+WD+ RP+ VSPWEIE + + +L P +K +
Sbjct: 332 GSREADPMWHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTP-HSKRLKS 390
Query: 290 RLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
P + LP+ + + A A+ H + Q
Sbjct: 391 CFPQVNPDIVLPNGSVSSDFAESARFHKVLQ 421
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 193/275 (70%), Gaps = 6/275 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVP 146
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-QPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG QP+RHLLTTGWS FV++KR
Sbjct: 147 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLTTGWSVFVSAKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 207 LVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFT 266
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 267 IFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 326
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 327 VRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 361
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 199/297 (67%), Gaps = 11/297 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+QE DEV+AQ+TL P P P + K + SFSK LTASDTSTHGGFS+
Sbjct: 81 ADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTSTHGGFSI 140
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS FV++KR
Sbjct: 141 PRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSVFVSAKR 200
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +T + F
Sbjct: 201 LQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAASTNSRFT 260
Query: 180 VYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+ G+ D P
Sbjct: 261 IFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTITGIGDLDP 320
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W +S WRSLKV WDE + + RVS WEIEP P L+ L ++KRPR
Sbjct: 321 VRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLRSKRPR 374
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 483 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 542
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 661 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 717
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 718 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 760
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 190/274 (69%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 108 ADRDTDEIYAQMSLQPVNSEKDVF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 164
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 165 VPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSK 224
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E +L VGVR RQQ+++PS V+S+ SMH+GVLA A+HA A ++ F
Sbjct: 225 RLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAAAHAAANRSPF 284
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY +AV + +VGMR+ M FE E+S +RR+ GT+VG+ D
Sbjct: 285 TIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDLD 344
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 345 PLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D++ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 836 RTYTKVQKAG-SVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVDYEND 894
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF V+ I I S +V++MS
Sbjct: 895 VLLIGDDPWEEFVGCVRCIRILSPSEVQQMS 925
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/308 (50%), Positives = 203/308 (65%), Gaps = 16/308 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+QE DEV+AQ+TL P P P + K + SFSK LTASDTSTHGGFS+
Sbjct: 81 ADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTASDTSTHGGFSI 140
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD ++ P QELVA+DLH EW F+HI+RGQPRRHLLTTGWS FV++KR
Sbjct: 141 PRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLTTGWSVFVSAKR 200
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGDT +FLR E G+ +G+R RQQ+++P+S++SS SM +GVLA A+HA +T + F
Sbjct: 201 LQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAAAHAASTNSRFT 260
Query: 180 VYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY +A++ + VGMR++M E EDS RR+ GT+ G+ D P
Sbjct: 261 IFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYMGTITGIGDLDP 320
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR--- 290
W +S WRSLKV WDE + + RVS WEIEP P L+ L ++KRPR
Sbjct: 321 VRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLT---VPFLLCNSSFLLRSKRPRGTE 377
Query: 291 --LSMEVP 296
L M+ P
Sbjct: 378 EELQMKAP 385
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 483 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT 542
P+ S +Q R+ TKV G +VGR+LD+T Y L +EL MF ++ ++
Sbjct: 649 PQPSWPQQVYPPPVRTFTKVHKVG-SVGRSLDITRFKNYHELRNELTRMFGLEHD--HKS 705
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
W++V+ D+E DM+L+GDDPW EF VK I I SS ++ +M+
Sbjct: 706 GWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMN 748
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/273 (52%), Positives = 191/273 (69%), Gaps = 7/273 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A++++DE+YAQ++L P S+ + P S P F K LTASDTSTHGGFSV
Sbjct: 115 ADKDSDEIYAQMSLQPVHSERDVFPVPEFGLLRGSKHPS-EFFCKTLTASDTSTHGGFSV 173
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKR
Sbjct: 174 PRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 233
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F+
Sbjct: 234 LRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFL 293
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR ++F+I + KY +A+ ++ +V MR+ M FE EDS +RR+ GT+VG+ D P
Sbjct: 294 IFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRYMGTIVGISDLDP 353
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 354 LRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR---TKWEIVYTDDEG 553
R+ TKVQ G +VGR++D+T+ Y L +E MF ++G L TR + W++VY D E
Sbjct: 758 RTYTKVQKTG-SVGRSIDVTSFRDYKELKSAIECMFGLEGLL-TRPQSSGWKLVYVDYES 815
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
D++LVGDDPW EF VK I I S +V++MS G KL
Sbjct: 816 DVLLVGDDPWEEFVGCVKCIRILSPTEVQQMSEEGMKL 853
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 200/294 (68%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGFSV
Sbjct: 93 ADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVP 152
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 153 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 212
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 213 LAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 272
Query: 181 YYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 273 FYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 332
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 333 RWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 191/274 (69%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P + + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 146
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 147 RRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLLTTGWSIFVSAKRL 206
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F V
Sbjct: 207 VAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTV 266
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 267 FYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSV 326
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 327 RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 360
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 496 NRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDE 552
N+S+T V++ + +VGR+LD++ Y L +EL +MF I+G+L R+ W++V+ D E
Sbjct: 712 NQSQTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRE 771
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW F N V I I S +D++KM
Sbjct: 772 NDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 803
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/294 (51%), Positives = 200/294 (68%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TLLP PS + S +P+ F K LTASDTSTHGGFSV
Sbjct: 93 ADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVP 152
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 153 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 212
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 213 LAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 272
Query: 181 YYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 273 FYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 332
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 333 RWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 185/281 (65%), Gaps = 14/281 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTASDT 51
AE +D+VYAQ++L+PE + E + A H F K LTASDT
Sbjct: 104 AEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLTASDT 163
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTTGW 223
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRGE+GEL +GVR A+ + + +Q ++ LA ++A
Sbjct: 224 SAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQSSLADVANA 283
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ ++ F +YY PR +S+FII NK+L++++ F+ GMR KMRFE ED+ ERR++G +
Sbjct: 284 ISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERRYTGLIT 343
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
G+ + P W SKW+ L V+WD+ R RVSPWE+EP
Sbjct: 344 GISELDPTRWPGSKWKCLLVRWDD-TEANRHSRVSPWEVEP 383
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/293 (50%), Positives = 194/293 (66%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +
Sbjct: 206 VAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I K+ +AV + + +VGMR++M FE E+S RR+ GT+ G D P
Sbjct: 266 FYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMGTITGKCDLDPV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS W+IEP + P P + KRP
Sbjct: 326 RWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPL--TTFPMYPSPFALRLKRP 376
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
VGR LD++ Y+ L ++ +MF ++GQL R+ W++V+ D E D +L+GD PW
Sbjct: 718 CVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEA 777
Query: 566 FCNMVKRIFICSSQDVKKM 584
F N V I I S D++ M
Sbjct: 778 FVNNVWYIKILSPHDIQMM 796
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 206/334 (61%), Gaps = 16/334 (4%)
Query: 2 AEQETDEVYAQITL----------LPEPSQNEPTTPDPCPADSPR--PKV-HSFSKVLTA 48
A+ TDEVYAQ+TL + + E D AD+ + P++ H F K LTA
Sbjct: 85 ADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPHMFCKTLTA 144
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD + P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 145 SDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 204
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRGE+GEL +GVR +A+ ++ P +Q L
Sbjct: 205 TGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQDPGHSSLGNV 264
Query: 169 SHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
+HA+A ++ F VYY PR S+FII K++ +V F+ GMR+KMR+E ED+ ERR +G
Sbjct: 265 AHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMRYENEDASERRSTG 324
Query: 227 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
++G + P SKW+ L V+WD+ RP+RVSPW+IE + + + + +K
Sbjct: 325 IIIGSRESDPKSYGSKWKCLVVRWDDDIEGRRPNRVSPWDIE-LTGAVSGSHLSIHHSKR 383
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P L P + LPS + + A A+ H + Q
Sbjct: 384 MKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQ 417
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 214/363 (58%), Gaps = 16/363 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQ-----NEPTTPDPCPADSP-------RPKV-HSFSKVLTA 48
A+ TDEVYAQ++LL + + + + + C D R ++ H F K LTA
Sbjct: 47 ADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTGAAKRRARMPHMFCKTLTA 106
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PPLD N P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 107 SDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLT 166
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS FV K+LV+GD +FLRGE+G L +GVR A+ ++ P + +Q L L
Sbjct: 167 TGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFPALFNQDSSLRSLGNV 226
Query: 169 SHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
+HAVA +++F +YY PR S+FI+ K++ + + F+VGMR+KM++E ED+ ERR +G
Sbjct: 227 AHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMKYENEDASERRSTG 286
Query: 227 TVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ G + SKW+ L V+WD+ R +RVSPWEIE + + +L P +K
Sbjct: 287 MITGSRESDLKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIELAGSVSGSHLSSP-HSKR 345
Query: 287 KRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSN 346
+P L P + LPS + + A A+ H + Q K D V + S S
Sbjct: 346 LKPCLPQVNPDMLLPSGSVSSDFAESARFHKVLQGQELLGSKAHDGTVNSASEASQASEA 405
Query: 347 SNF 349
NF
Sbjct: 406 RNF 408
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 196/330 (59%), Gaps = 56/330 (16%)
Query: 1 MAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSPRPKV 39
+A +E DEVY Q+TLLP+ PT P
Sbjct: 114 LANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTP---------- 163
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K LT SDTSTHGGFSV R+ A +C PPLD P+QELVAKDLHG EW+F+HI+R
Sbjct: 164 HMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYR 223
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--------------GENGELHVGVRCLAR 145
GQPRRHLLTTGWS FV K LV+GD +FLR G+NGEL +G+R R
Sbjct: 224 GQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVR 283
Query: 146 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
++ +P S++ +Q+ + L++ ++A++T++MF V+Y PR S +F++ KY++++ N
Sbjct: 284 PRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNP 343
Query: 204 FAVGMRYKMRFEGEDSPERRF-SGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDR 261
+G R+KMR E ++SPERR SG ++G+ D P+ W SKWR L V+WD+ DR
Sbjct: 344 MTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDR 403
Query: 262 VSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
VSPWEI+P ++P QP L+ PRL
Sbjct: 404 VSPWEIDP----SSP---QPPLSIQSSPRL 426
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 188/274 (68%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A++ETDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 109 ADKETDEIYAQMSLKPVNSEKDVF---PVPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 165
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV +K
Sbjct: 166 VPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFVGAK 225
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 226 RLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPF 285
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L Y +A+ + +VGMR+ M FE E+S +RR+ GT+V D
Sbjct: 286 TIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYMGTIVSTSDLD 345
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 346 PLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ Y+ L +E MF ++G L+ + W++VY D E D
Sbjct: 840 RTYTKVQKTG-SVGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 898
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 899 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 929
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 188/271 (69%), Gaps = 4/271 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A++ETDE+YAQ+TL P S+ E + F K LTASDTSTHGGFSV R
Sbjct: 110 ADKETDEIYAQMTLQPLNSEREVFPISDFGLKHSKHPSEFFCKTLTASDTSTHGGFSVPR 169
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 170 RAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLR 229
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F ++
Sbjct: 230 AGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIF 289
Query: 182 YKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+ D P
Sbjct: 290 YNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLR 349
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 350 WPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 34/343 (9%)
Query: 263 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLD----LPSAASAPWSARL------ 312
SPW ++P + S+ P+ +A+ ++ P LD L A+S P++ +
Sbjct: 589 SPWPMQPLIESSMPHPQMIGMAQADSAMVNGLFPQLDIDEWLAYASSQPFAGQNRPTGPF 648
Query: 313 --AQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFSSNSNFMSRTQSDGEWLTS--PRVK 366
Q HN Q V N+ W H K+ F S ++ ++ G + + P
Sbjct: 649 SDLQEHNSLQPQVVNPPLPSMNNEVWDHYVKNFKFLSQADQLTSICQPGMYGLNGVPSSN 708
Query: 367 FSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE--TGTSCRLFG 424
+ L E+ + ++ A + T + T+L++ T + E C
Sbjct: 709 NLRDLSAESNNQSEICVNVDASNSVGTTMVDPSTSSTILDEFCTMKDGEFQNPQDC---- 764
Query: 425 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 484
++ + +SS + S+ E H +S G S +F E S
Sbjct: 765 --MVGNLSSSQDVQSQITSASLAESHAYPLRDIPDNSGGTSSSHVDFDES-------SFL 815
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--T 542
++ S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ +
Sbjct: 816 QNNSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGS 874
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
W++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 875 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 917
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/292 (51%), Positives = 194/292 (66%), Gaps = 24/292 (8%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPRPKVHSF 42
A+ ETDEVYAQ+TL P P + D C A+ S +P + F
Sbjct: 94 ADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQP-TNYF 152
Query: 43 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 102
K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP
Sbjct: 153 CKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQP 212
Query: 103 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 162
+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+
Sbjct: 213 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHI 272
Query: 163 GVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDS 219
G+LA A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S
Sbjct: 273 GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEES 332
Query: 220 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 333 SVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 384
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 732 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV KM P +
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRY 831
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 153/295 (51%), Positives = 196/295 (66%), Gaps = 9/295 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+TLLP + + P + F K LTASDTSTHGGFS+ R
Sbjct: 70 ADHETDEVYAQMTLLPIQNSEKEALLAPDSVIPNKQPSEYFCKTLTASDTSTHGGFSIPR 129
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD +S P QELVA+DLH +W F+HI+RGQPRRHLLTTGWS FV+ KRL
Sbjct: 130 RAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWSVFVSIKRLQ 189
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+ +F+R + L +G+R RQQS MPSSV+SS SMH GVLA ASHA AT + F ++
Sbjct: 190 AGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAAATSSRFKIF 249
Query: 182 YKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
Y PR S+F+I L KY +A+ N + +GMR++M FE E+S R++ GT+ + D P
Sbjct: 250 YNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTITCIGDLDPAR 309
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
W S WRSLKV WDE + R RVS WEIEP + TP L+ PV ++KRP+
Sbjct: 310 WPKSDWRSLKVGWDESIAGDRQLRVSLWEIEP---TPTPFLLCPPPVALRSKRPQ 361
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 499 RTKVQMQGV-AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDM 555
RT Q+ + +VGR+LD+ Y L EL F + + + + W+IV+ D+E D
Sbjct: 670 RTCFQVHKLGSVGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDDT 729
Query: 556 MLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+L+GDDPW EF VK I I S +V +M
Sbjct: 730 LLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 190/275 (69%), Gaps = 8/275 (2%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 92 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 150
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A PPLD Q P QEL+A+D+H EW+F+HIFRG P+RHLLTTGWS FV++KR
Sbjct: 151 PRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWSVFVSAKR 209
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
LVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 210 LVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFT 269
Query: 180 VYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S +F+I L+KY++AV + + +VGMR++M FE E+S RR+ GT+ V D P
Sbjct: 270 IFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADP 329
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 330 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 364
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 715 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 773
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 774 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 810
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 192/273 (70%), Gaps = 8/273 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ E P + D S P F K LTASDTSTHGGFSV
Sbjct: 107 ADKETDEIYAQMTLQPLNSEREVFPIS-DFGHKHSKHPS-EFFCKTLTASDTSTHGGFSV 164
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKR
Sbjct: 165 PRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKR 224
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR + RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 225 LRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFT 284
Query: 180 VYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+ D P
Sbjct: 285 IFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDVDP 344
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+++V+WDEP + +RVS WEIE
Sbjct: 345 LRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 427 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 486
++ + +SS + S+ TE H +S G S +F E S ++
Sbjct: 760 MVGNLSSSQDVQSQITSASLTESHAFPLRDIPDNSGGTSSSHVDFDES-------SFLQN 812
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKW 544
S Q R+ TKVQ G +VGR++D+TT Y+ LI +E MF + G L+ + W
Sbjct: 813 NSWQQVPAPIRTYTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGW 871
Query: 545 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++VY D E D++LVGDDPW EF V+ I I S +V++MS
Sbjct: 872 KLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 912
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 191/274 (69%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD+ +F+R E +L +G+R +R Q+ +PSS++SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGIGDLDSV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R R S WEIEP
Sbjct: 326 RWPNSHWRSVKVGWDESTAGERQARASLWEIEPL 359
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
++ KV G +VGR+LD++ Y L +EL +MFDIKG L R+ W++V+ D E D
Sbjct: 694 KNFVKVYKSG-SVGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDD 752
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GDDPW F N V I I S +DV+KM
Sbjct: 753 VLLLGDDPWESFVNSVWYIKILSPEDVQKM 782
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/276 (52%), Positives = 195/276 (70%), Gaps = 8/276 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD---SPRPKVHSFSKVLTASDTSTHGGFS 58
A+ ETDEVYAQ+TL P SQ++ PA+ + + + F K LTASDTSTHGGFS
Sbjct: 71 ADVETDEVYAQMTLQPL-SQDDQKDAYLLPAELGTASKQPTNYFCKTLTASDTSTHGGFS 129
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + P LD +Q+ P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 130 VPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 189
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLVAGD+ +F+ E +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 190 RLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAAHAAATNSRF 249
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D
Sbjct: 250 TIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 309
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 310 PVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 345
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 190/274 (69%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+ L P + + T P P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQPSNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+AKDLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V GD+ +F+R E +L +G+R R Q+ +PSS++SS SMH+G+LA A+HA AT + F V
Sbjct: 206 VTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAAHAAATNSCFTV 265
Query: 181 YYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR +S+F++ L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 266 FYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITGIGDLDSV 325
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R R S WEIEP
Sbjct: 326 LWPNSHWRSVKVGWDESTAGERQARASLWEIEPL 359
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 565
+VGR+LD++ Y+ L +EL MFDIKG L R+ W++V+ D E D++L+GDDPW
Sbjct: 686 SVGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILLLGDDPWES 745
Query: 566 FCNMVKRIFICSSQDVKKM---SPGSKLP 591
F N V I I S DV KM GS P
Sbjct: 746 FVNSVWYIKILSPDDVHKMGEHGEGSSFP 774
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 188/274 (68%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A++++DE+YAQ++L P S+ + P RP H F K LTASDTSTHGGFS
Sbjct: 109 ADKDSDEIYAQMSLQPVNSEKDVFL---VPDFGLRPSKHPNEFFCKTLTASDTSTHGGFS 165
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD PTQEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +K
Sbjct: 166 VPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAK 225
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E +L +GVR RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 226 RLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPF 285
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY + V + + GMR+ M FE E+S +RR+ GT+VG+ D
Sbjct: 286 TIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLD 345
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDEP + +RVS WEIE
Sbjct: 346 PLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T+ YD L +E MF ++G L+ + W++VY D E D
Sbjct: 835 RTYTKVQKAG-SVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYEND 893
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF + V+ I I S +V++MS
Sbjct: 894 VLLIGDDPWEEFVSCVRCIRILSPSEVQQMS 924
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/274 (52%), Positives = 189/274 (68%), Gaps = 5/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + + P P + + F K LTASDTSTHGGFSV
Sbjct: 88 ADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQPTNYFCKTLTASDTSTHGGFSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QELVA+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 148 RRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA A+HA AT + F +
Sbjct: 208 VAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTI 267
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L+KY +AV + + + MR++M FE ++S RR+ G + G+ D P
Sbjct: 268 FYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVRRYMGRITGISDLDPV 327
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
W +S WRS+KV WDE + R RVS WEIEP
Sbjct: 328 RWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPL 361
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ KV G +VGR+LD+ Y L +EL +MF + G+L R+ W++V+ D E D
Sbjct: 668 RTFVKVYKSG-SVGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDREND 726
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEG 597
++L+GDDPW F N V I I S DV+ M P+ + G
Sbjct: 727 VLLLGDDPWESFVNNVWYIKILSPDDVQNMGKHDVEPLNPMGG 769
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGFSV
Sbjct: 85 ADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ + +
Sbjct: 265 FYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELDAAR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 957 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1015
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1016 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1046
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 203/335 (60%), Gaps = 17/335 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKV---HSFSKVLT 47
A+ TDEVYA+++LLPE + E D + +P H F K LT
Sbjct: 92 ADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTPHMFCKTLT 151
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
ASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHLL
Sbjct: 152 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLL 211
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
TTGWS FV K+LV+GD +FLRGE+G L +GVR A+ + P + +Q L
Sbjct: 212 TTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALHNQCSSQTTLGN 271
Query: 168 ASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
+ AVAT+T+F +YY PR SQ FI+ K+ ++N +VGMR +MR+E +D+ ERR +
Sbjct: 272 VAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRYESDDASERRCT 331
Query: 226 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAK 285
G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + ++ P +K
Sbjct: 332 GIIIGSREAEPIWYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSGSHMCAPN-SK 390
Query: 286 NKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
+P L P + LP+ + + A + H + Q
Sbjct: 391 RLKPCLPQVNPEIVLPNGSVSSDFAGSVRFHKVLQ 425
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 205/337 (60%), Gaps = 22/337 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTASDT 51
AE +DEVYAQ++L+PE + E + A H F K LTASDT
Sbjct: 104 AEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLTASDT 163
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTTGW 223
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRGE+GEL +GVR A+ + + ++ ++A
Sbjct: 224 SAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLNQISPGDVANA 283
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T++ F +YY PR +S+FII NK+L++++ F+ GMR+KMRFE ED+ ERR++G +
Sbjct: 284 ISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERRYTGIIT 343
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP---NLVQPVLAK 285
GV + P W SKW+ L V+WD+ + R RVSPWE+EP + + N + P L +
Sbjct: 344 GVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEPSGSGSISSSNNFMAPGLKR 402
Query: 286 NKR--PRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
++ P E P +P AP ++S + Q
Sbjct: 403 SRSGLPSSKAEFP---IPDGIGAPGFRESSRSQEVLQ 436
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/294 (51%), Positives = 199/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TLLP S + S +P+ F K LTASDTSTHGGFSV
Sbjct: 93 ADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQPEFFCKTLTASDTSTHGGFSVP 152
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 153 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 212
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 213 LAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 272
Query: 181 YYKPRT--SQFIISLNKYLEAVN-NKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV+ N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 273 FYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 332
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK S+WR+L+V WDE R +RVS WEIEP +A + P ++KRPR
Sbjct: 333 RWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFF--ICPPPFLRSKRPR 384
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L +L F I+GQL R K W++VY D E D
Sbjct: 995 RTYTKVYKRG-AVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW +F N V+ I I S Q+V++MS
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMS 1084
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 200/336 (59%), Gaps = 18/336 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSKVL 46
A+ TDEVYA+++LLPE E D + RP H F K L
Sbjct: 92 ADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCKTL 151
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 152 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHL 211
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q L
Sbjct: 212 LTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSNLG 271
Query: 167 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
+ AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR +MR+E +D+ ERR
Sbjct: 272 NVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASERRC 331
Query: 225 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
+G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + + P +
Sbjct: 332 TGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPS-S 390
Query: 285 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
K +P L P + LP+ + + A A+ H + Q
Sbjct: 391 KRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/310 (45%), Positives = 189/310 (60%), Gaps = 44/310 (14%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK----------VHSFSKVLTASDT 51
AE TDEVYAQ++L+PE + AD + H F K LTASDT
Sbjct: 104 AEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTASDT 163
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG+EWRF+HI+RGQPRRHLLTTGW
Sbjct: 164 STHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTTGW 223
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG +GEL +G+R A+ + S P + SQ ++L L +A
Sbjct: 224 SAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLNLNTLTAVVNA 283
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T+++F + Y PR +S+FII L K+ +++++ F+ GMR+KMR E ED+ ERR++G +
Sbjct: 284 ISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAERRYTGLIT 343
Query: 230 GVEDFSP-HWKDSKWR------------------------------SLKVQWDEPASITR 258
G+ D P W SKWR SL+V+WD+ R
Sbjct: 344 GISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD-IEANR 402
Query: 259 PDRVSPWEIE 268
+RVSPWEIE
Sbjct: 403 HNRVSPWEIE 412
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R V F K LTASDTSTHGGFSV
Sbjct: 85 ADAETDEVYAQMTLQPVSKYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ + +
Sbjct: 265 FYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELDAAR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 751 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 809
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 810 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 840
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 200/336 (59%), Gaps = 18/336 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------------DPCPADSPRPKV---HSFSKVL 46
A+ TDEVYA+++LLPE E D + RP H F K L
Sbjct: 92 ADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCKTL 151
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
TASDTSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RGQPRRHL
Sbjct: 152 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHL 211
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV K+L++GD +FLRGE+G L +GVR A+ + P +Q L
Sbjct: 212 LTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSSNSNLG 271
Query: 167 TASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
+ AVAT+T+F +YY PR +Q FI+ K+ + N +VGMR +MR+E +D+ ERR
Sbjct: 272 NVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASERRC 331
Query: 225 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
+G ++G + P W SKW+ L V+WD+ P+RVSPWEIE + + + P +
Sbjct: 332 TGIIIGSREADPIWYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPS-S 390
Query: 285 KNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQ 320
K +P L P + LP+ + + A A+ H + Q
Sbjct: 391 KRLKPCLPQVNPEIVLPNGSVSSDFAGSARFHKVLQ 426
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 192/313 (61%), Gaps = 15/313 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTASDT 51
AE TDEVYAQ++LLPE E D D K H F K LTASDT
Sbjct: 109 AETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDT 168
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 228
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +HA
Sbjct: 229 SAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHA 288
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G +
Sbjct: 289 ISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIIS 348
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V KR
Sbjct: 349 GISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKR 406
Query: 289 PRLSMEVPPLDLP 301
R+ + D+P
Sbjct: 407 SRIGISSGKPDIP 419
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 160/335 (47%), Positives = 215/335 (64%), Gaps = 17/335 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKETDEIYAQMTLQPVHSETD-VFPIPSLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 221 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 280
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +RR +GT+VG+ D+ P
Sbjct: 281 IYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIKRRCTGTIVGISDYDPM 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-SME 294
W +SKWR+L+V+WDE RP+RVS W+IE TP N+V P +KR L S
Sbjct: 341 RWPNSKWRNLQVEWDEHGYGERPERVSLWDIE------TPENMVFPSPLNSKRQCLPSYA 394
Query: 295 VPPLDLPSA--ASAPWSARLAQSHNLTQLSVTAED 327
VP L + S +S P A+ + NL Q+ + D
Sbjct: 395 VPGLQIGSVNMSSIP-RAQGSPFGNLQQMPGSGSD 428
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 843 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGGSDWKLVYVDYEND 901
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 902 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 932
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 190/274 (69%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 107 ADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 163
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 164 VPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAK 223
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 224 RLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPF 283
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+ D
Sbjct: 284 TIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVGISDLD 343
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 344 PLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 837 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 895
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 896 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 926
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 191/313 (61%), Gaps = 15/313 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTASDT 51
AE TDEVYAQ++LLPE E D D K H F K LTASDT
Sbjct: 109 AETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDT 168
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 228
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +HA
Sbjct: 229 SAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHA 288
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G +
Sbjct: 289 ISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIIS 348
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V KR
Sbjct: 349 GISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKR 406
Query: 289 PRLSMEVPPLDLP 301
R+ D+P
Sbjct: 407 SRIGFSSGKPDIP 419
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 190/274 (69%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 85 ADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 141
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 142 VPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAK 201
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 202 RLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPF 261
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG+ D
Sbjct: 262 TIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVGISDLD 321
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 322 PLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 815 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 873
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 874 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 904
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/313 (46%), Positives = 191/313 (61%), Gaps = 15/313 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTASDT 51
AE TDEVYAQ++LLPE E D D K H F K LTASDT
Sbjct: 109 AETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDT 168
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 228
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ + +HA
Sbjct: 229 SAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNHNNFSEVAHA 288
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T ++F + Y P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G +
Sbjct: 289 ISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERRSPGIIS 348
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ D P W SKWR L V+WD+ + RVSPWEIEP + + N V KR
Sbjct: 349 GISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKR 406
Query: 289 PRLSMEVPPLDLP 301
R+ D+P
Sbjct: 407 SRIGFSSGKPDIP 419
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/277 (51%), Positives = 192/277 (69%), Gaps = 11/277 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTT---PD-PCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ ETDEVYAQ+TL P Q + + PD P+ P + F LTASDTSTHGGF
Sbjct: 84 ADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPS---NYFCXTLTASDTSTHGGF 140
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S+ R+ A + P LD Q P QEL A+DLH EW+F+HI+RGQP+RHLLTTGWS FV++
Sbjct: 141 SIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLTTGWSVFVSA 200
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRLVAGD+ +F+R ++G+L +G+R + + MPSSV+SS SMH+GVLA A+HA AT +
Sbjct: 201 KRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAAAHAAATNSP 260
Query: 178 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR S+F+I +KY +AV + + +VG+R++M FE E+S RR+ GT+ G+ D
Sbjct: 261 FNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYMGTITGIGDM 320
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
P W +S+WRSLKV WDE + R RVS WEIEP
Sbjct: 321 DPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPL 357
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 481 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH- 539
+SP+ + Q L + R+ TKV G ++GR++D+T GY L EL MF+++GQL
Sbjct: 723 ISPQAANLSQIHLPT-RTFTKVYKLG-SIGRSIDVTRFSGYPELRCELARMFNLEGQLED 780
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
R+ W++V+ D E D++L+GDDPW EF V+ I I S +V++M+
Sbjct: 781 CRSGWQLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMT 826
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 188/274 (68%), Gaps = 10/274 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----HSFSKVLTASDTSTHGGF 57
A++ETDEVYAQ+TL P N T P PA K F K LTASDTSTHGGF
Sbjct: 103 ADKETDEVYAQMTLQPV---NSETDVFPIPALGSYAKSKHPPEYFCKNLTASDTSTHGGF 159
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +
Sbjct: 160 SVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGA 219
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRL AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++ +
Sbjct: 220 KRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAAAAHAASSGSS 279
Query: 178 FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
F +YY PRT S F++ L +Y +A + +VGMR+ M FE E+S +RR++GT+VGV D+
Sbjct: 280 FTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSKRRYTGTIVGVSDYD 339
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 340 PIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 187/284 (65%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R +R Q ++ SSV+S SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPLR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 838 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 896
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 897 ILLVGDDPWEEFVSCVKSIKILSSAEVQQMS 927
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/313 (47%), Positives = 205/313 (65%), Gaps = 18/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++ + F
Sbjct: 221 LKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFT 280
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+YY PRT S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+ P
Sbjct: 281 IYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPM 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR----PR 290
W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N + P
Sbjct: 341 RWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCLPG 394
Query: 291 LSMEVPPLDLPSA 303
+ VP +++ SA
Sbjct: 395 YGVSVPGMEIGSA 407
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 852 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 910
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 911 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 941
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/293 (51%), Positives = 198/293 (67%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q + + P R + F K LTASDTSTHGGFSV
Sbjct: 90 ADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNYFCKTLTASDTSTHGGFSVP 149
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 150 RRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 209
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD+ +F+ + +L +G+R R Q+ MPSSV+SS SMHLG+LA A+HA T + F +
Sbjct: 210 VAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAAAAHAAPTNSRFTI 269
Query: 181 YYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR TS+F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 270 FYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDPA 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W +S WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 330 RWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 380
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ E
Sbjct: 708 VKVYKSG-SFGRSLDITKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGRE----- 761
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
EF + V I I S Q+V++M
Sbjct: 762 -------EFVSSVWCIKILSPQEVQQM 781
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/317 (49%), Positives = 208/317 (65%), Gaps = 13/317 (4%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E S +P+ F K LTASDTSTHGGFSV
Sbjct: 90 ADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNKPQPEFFCKTLTASDTSTHGGFSVP 149
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + TP QELVA+DLH W+F+HI+RG+P+RHLLTTGWS FV+ KRL
Sbjct: 150 RRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLTTGWSLFVSGKRL 209
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 210 FAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 269
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV N++ + GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 270 FYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTRRYMGTITGISDIDPV 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR----L 291
WK+S+WR+L+V WDE + R +RVS WEIEP A P + P L ++KRPR L
Sbjct: 330 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPSPLFRSKRPRQPGML 386
Query: 292 SMEVPPLDLPSAASAPW 308
+ E LD PW
Sbjct: 387 ADEYSDLDNLFKRPMPW 403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHEND 1045
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFINCVRCIKILSPQEVQQMS 1076
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 190/279 (68%), Gaps = 15/279 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE+YAQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 108 ADKDTDEIYAQMSLQPVNSEKDIF---PIPDFGLKPSKHPSEFFCKTLTASDTSTHGGFS 164
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD + PTQEL+ +DLH + F+HI+RGQP+RHLLTTGWS FV++K
Sbjct: 165 VPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTGWSVFVSAK 224
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD +F+R E +L +GVR RQQ+S+PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 225 RLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAHAAANRSPF 284
Query: 179 VVYYKPR-------TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVG 230
++Y PR S+F+I L KY ++V + +VGMR+ M FE E+S +RR+ GT+VG
Sbjct: 285 TIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGTIVG 344
Query: 231 VEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ D P W SKWR+L+V+WDE + RVS WEIE
Sbjct: 345 ISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+ + Y+ L +E MF ++G L+ + + W++VY D E D
Sbjct: 797 RTYTKVQKMG-SVGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDYEND 855
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF V+ I I S +V++MS
Sbjct: 856 VLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 886
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 187/272 (68%), Gaps = 6/272 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGGFSV
Sbjct: 103 ADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHSSEYFCKNLTASDTSTHGGFSV 161
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 162 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 221
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 222 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 281
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+ P
Sbjct: 282 VYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPM 341
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 342 RWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 198/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGFSV
Sbjct: 92 ADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVP 151
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 152 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 211
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 212 FAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 271
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 272 FYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 331
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 332 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 383
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 922 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 980
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 981 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1011
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 187/272 (68%), Gaps = 6/272 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGGFSV
Sbjct: 102 ADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 221 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 280
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+ P
Sbjct: 281 VYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPM 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 341 RWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 187/272 (68%), Gaps = 6/272 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGGFSV
Sbjct: 103 ADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSV 161
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 162 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 221
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 222 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 281
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+ P
Sbjct: 282 VYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPM 341
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 342 RWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 833 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 891
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 892 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 922
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/319 (45%), Positives = 192/319 (60%), Gaps = 16/319 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTASDT 51
AE TDEVYAQ++LLPE E D D K H F K LTASDT
Sbjct: 107 AETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTASDT 166
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 167 STHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 226
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+M+ A HA
Sbjct: 227 SAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFAEVVHA 286
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++T + F +YY P+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G +
Sbjct: 287 ISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRSPGIIT 346
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEP-ASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 287
G+ D P W SKWR L V+WD+ A+ R+SPWEIEP + ++ + K
Sbjct: 347 GINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSF--ITTGPK 404
Query: 288 RPRLSMEVPPLDLPSAASA 306
R R+ D+P + S
Sbjct: 405 RSRIGFSSGKPDIPVSGSG 423
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 198/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGFSV
Sbjct: 94 ADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVP 153
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 154 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 213
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 214 FAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 273
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 274 FYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 333
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 334 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 385
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 1005 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1063
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1064 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1094
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/292 (50%), Positives = 193/292 (66%), Gaps = 7/292 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGGFS+
Sbjct: 80 ADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGGFSIP 137
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 138 RRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVSAKRL 197
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T + F +
Sbjct: 198 QAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSRFTI 257
Query: 181 YYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+ D S
Sbjct: 258 FYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGDLDSV 317
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 318 RWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 553
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 825 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 884
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 885 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 916
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/292 (50%), Positives = 193/292 (66%), Gaps = 7/292 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + EP TPD P+ + SF K LTASDTSTHGGFS+
Sbjct: 80 ADPDTDEVYAQMTLQPVQNDKEPFLTPDL--GIQPKQQTLSFCKTLTASDTSTHGGFSIP 137
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH +W F+HI+RGQPRRHLLTTGWS FV++KRL
Sbjct: 138 RRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHLLTTGWSVFVSAKRL 197
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGDT +F+R EN L +G+R RQQ+++PSS++SS SM +GVLA A+HA T + F +
Sbjct: 198 QAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSRFTI 257
Query: 181 YYKPRT--SQFIISLNKYLEAVNN-KFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F++ ++ +A + + VGMR++M E EDS RR+ GT+ G+ D S
Sbjct: 258 FYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRRYMGTITGIGDLDSV 317
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
W +S WR+LKV WDE + R RVS WEIEP A P L K R
Sbjct: 318 RWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLFLRKRTR 369
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL---HTRTKWEIVYTDDEG 553
R+ TKV + +VGR++D+T L Y+ L ++ MF+++GQL R+ W++V+ D EG
Sbjct: 822 RTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEG 881
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D++LVGDDPW EF V+ I I S +V++++
Sbjct: 882 DVLLVGDDPWEEFVGCVRFIKILSPSEVQQLN 913
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/297 (49%), Positives = 199/297 (67%), Gaps = 10/297 (3%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ E DEVYAQ+TL P PS E + +P+ F K LTASDTSTHGGFSV
Sbjct: 94 ADPEADEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQTEFFCKTLTASDTSTHGGFSVP 153
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 154 RRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 213
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 214 FAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 273
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 274 FYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESGTRRYMGTITGISDLDPV 333
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV--LAKNKRPRL 291
WK+S+WR+L+V WDE + R +RVS WEIEP A P + P ++KRPRL
Sbjct: 334 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA---PFFICPTPPFFRSKRPRL 387
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTFTKVHKRG-AVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1059
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V+++S
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQIS 1090
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 195/313 (62%), Gaps = 16/313 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV----------HSFSKVLTASDT 51
A+ TDEVYAQ++L+P+ Q E D + H F K LTASDT
Sbjct: 110 ADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTASDT 169
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGW
Sbjct: 170 STHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGW 229
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLR +GEL +GVR A+ ++ S+ +++ + A +
Sbjct: 230 SAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVSGIVDAVNV 289
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++++ F + Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G VV
Sbjct: 290 ISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVV 349
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
GV + P W SKWR L V+WD+ ++R +RVSPWEIEP ++ P+ + V+ KR
Sbjct: 350 GVSNVDPVRWPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEPSGSAPVPSSL--VMPSAKR 406
Query: 289 PRLSMEVPPLDLP 301
R+ + D P
Sbjct: 407 TRVGFPISKADFP 419
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 199/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQITL P PS + S +P+ F K LTASDTSTHGGFSV
Sbjct: 88 ADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQPDFFCKQLTASDTSTHGGFSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 148 RRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 208 LAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTV 267
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PRT S+F+I L KY ++V +++ ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 268 FYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTITGISDLDPV 327
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 328 RWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFF--ICPPPFFRSKRPR 379
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 998 RTYTKVYKRG-AVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1087
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 199/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P PS + S +P+ F K LTASDTSTHGGFSV
Sbjct: 98 ADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQTDFFCKTLTASDTSTHGGFSVP 157
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 158 RRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 217
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R + +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 218 FAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 277
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 278 FYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 337
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + + +RVS WEIEP A + P ++KRPR
Sbjct: 338 RWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 389
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GY L +L F I+GQL R + W++VY D E D
Sbjct: 997 RTYTKVYKRG-AVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1086
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 219/358 (61%), Gaps = 62/358 (17%)
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 307
V WDEPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS
Sbjct: 181 VHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNL 238
Query: 308 WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKF 367
WS+ L Q H Q +T++ W +SP
Sbjct: 239 WSSVLTQPHEFAQSCITSQ--------------------------------W-SSP---- 261
Query: 368 SQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGI 425
QQ ++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI
Sbjct: 262 -QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGI 317
Query: 426 ELINHATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQ 480
+L++ + + +AP + +S T + H SD KS+I+K +EKKQE +
Sbjct: 318 DLMSSSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAE 367
Query: 481 VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT 540
SPKE QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +
Sbjct: 368 GSPKEVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS 425
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
R +WEIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 426 RNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 483
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQ-NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
AE++TDEVYAQITL+P ++ +EP +PDP P + RPKVHSFSKVLTASDTSTHGGFSVL
Sbjct: 110 AEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLTASDTSTHGGFSVL 169
Query: 61 RKHATECLPPL 71
RKHATECLPPL
Sbjct: 170 RKHATECLPPL 180
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 189/274 (68%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 325 WKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 185/272 (68%), Gaps = 6/272 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 221 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 280
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +RR +G +VG+ D+ P
Sbjct: 281 IYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRCTGAIVGISDYDPM 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 341 RWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 842 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 900
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 901 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 931
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 188/276 (68%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TLLP S E PRP+ F K LTASDTSTHGGFSV
Sbjct: 98 ADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTHGGFSVP 157
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 158 RRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 217
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 218 FAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 277
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F++ KY +A+ N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 278 FYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 337
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 338 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 373
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 1068
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADVETDEVYAQMTLQPVSKYEKEALLASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP RVS WEIEP V
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL + W++VY D E D
Sbjct: 930 RTYTKVQKRG-SVGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 988
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 989 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1019
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/274 (51%), Positives = 189/274 (68%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 265 FYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 325 WKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 358
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 970 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1059
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/284 (50%), Positives = 189/284 (66%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYDKDAILASDFGLKQNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS F+++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFISTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
YY PR S+F++ L KY +A+ + ++GMR++M FE E+S RR+ GTV G+ D P
Sbjct: 265 YYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTVTGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S+WR+L+V WDE + RP RVS W+IEP V TP + P
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV---TPFYICP 365
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 993 RTYTKVQKRG-SVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1051
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1052 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1082
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 189/304 (62%), Gaps = 27/304 (8%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-------------SPRPKVHSFSKVLT 47
MA+ TDEVYAQ++L+P + + + P H F K LT
Sbjct: 80 MADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIPHMFCKTLT 139
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
ASDTSTHGGFSV R+ A +C PPLD Q PTQELVAKDLHG EWRF+HI+RGQPRRHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHIYRGQPRRHLL 199
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
TTGWS+FV K+LV+GD +FLRG++GEL +G+R + +S+ ++ +S ++
Sbjct: 200 TTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQNSN------ISN 253
Query: 168 ASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
+ A++ +++F + Y PR Q FI+ K++++ N+ ++G R+KM FE ED+ ERR++
Sbjct: 254 IAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFKMNFESEDASERRYN 313
Query: 226 GTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
G + G+ D P W SKWR L V+WDE R +RVSPWEIE T + Q ++A
Sbjct: 314 GLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE-----LTGTVSQGMMA 368
Query: 285 KNKR 288
N +
Sbjct: 369 PNSK 372
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 184/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 85 ADAETDEVYAQMTLQPVNKYDKEALLASDMGLKQSRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I +KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK S+WR+L+V WDE + RP RVS WE+EP V
Sbjct: 325 WKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVV 358
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VY D E D
Sbjct: 992 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHEND 1050
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1051 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1081
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 194/315 (61%), Gaps = 17/315 (5%)
Query: 2 AEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
AE DE+YAQ++LL E S N R H F K LTASD
Sbjct: 13 AEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTASD 72
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+RGQPRRHLLTTG
Sbjct: 73 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLTTG 132
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLGVLATAS 169
WS+F K+L GD +FLR ++GEL +G+R RQ Q +P + + Q + +L+ +
Sbjct: 133 WSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNMLSMVA 192
Query: 170 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
A++ + +F +YY PR S +F++ KYL + ++ F++GMR K+R E ED+ E+R++G
Sbjct: 193 DALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKRYTGH 252
Query: 228 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ GV D P W +SKWR L V+WD+ A DRVSPWEIE +S + P+ + +
Sbjct: 253 ITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSLVSSFSFPLKSTS 310
Query: 287 KRPRLSMEVPPLDLP 301
KRP+++ D+P
Sbjct: 311 KRPKMNFPSIITDIP 325
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 413 KTETGTSCRLFGIELINHATSSA--PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 566 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 617
Query: 471 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 618 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 671
Query: 531 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 672 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 723
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 75 ADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVP 134
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 135 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 194
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 195 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 254
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 255 FYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 314
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 315 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 350
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 989 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1047
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1048 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1078
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 197/296 (66%), Gaps = 11/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 103 ADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGFSVP 162
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + LPPLD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV KRL
Sbjct: 163 RRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRL 222
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 223 FAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTI 282
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 283 FYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGISDLDPV 342
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
WK+S+WR+L+V WDE A+ R +RVS WEIEP A P + QP KRPR
Sbjct: 343 RWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAA---PFFICPQPFFGV-KRPR 394
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1010 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1099
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 90 ADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVP 149
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 150 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 209
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 210 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 269
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 270 FYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 330 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 365
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1004 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1062
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1063 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1093
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 90 ADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVP 149
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 150 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 209
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 210 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 269
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 270 FYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 329
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 330 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 365
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1003 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1061
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1062 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1092
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/274 (50%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYDKEALLASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + + F +
Sbjct: 205 FAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVRRYMGTITGITDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 998 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1056
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1057 ILLVGDDPWEEFVSCVQSIKILSSSEVQQMS 1087
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 191/294 (64%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 113 ADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVP 172
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 173 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 232
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 233 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 292
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 293 FYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 352
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE A+ R +RVS WEIEP A A KRPR
Sbjct: 353 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA--KRPR 404
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 550
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 853 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 911
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 912 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 946
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 113 ADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVP 172
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 173 RRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 232
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 233 FAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 292
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 293 FYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 352
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 353 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 388
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1027 RTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDD 1085
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 1086 ILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 1116
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 194/315 (61%), Gaps = 17/315 (5%)
Query: 2 AEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
AE DE+YAQ++LL E S N R H F K LTASD
Sbjct: 96 AEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTASD 155
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD +Q P+QEL AKDL+G+ WRF+HI+RGQPRRHLLTTG
Sbjct: 156 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLTTG 215
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLGVLATAS 169
WS+F K+L GD +FLR ++GEL +G+R RQ Q +P + + Q + +L+ +
Sbjct: 216 WSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNMLSMVA 275
Query: 170 HAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
A++ + +F +YY PR S +F++ KYL + ++ F++GMR K+R E ED+ E+R++G
Sbjct: 276 DALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKRYTGH 335
Query: 228 VVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN 286
+ GV D P W +SKWR L V+WD+ A DRVSPWEIE +S + P+ + +
Sbjct: 336 ITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQ--SSLVSSFSFPLKSTS 393
Query: 287 KRPRLSMEVPPLDLP 301
KRP+++ D+P
Sbjct: 394 KRPKMNFPSIITDIP 408
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 17/172 (9%)
Query: 413 KTETGTSCRLFGIELINHATSSA--PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKE 470
+T + +CRLFG L S P ++ VS L +++ +D
Sbjct: 649 ETYSKGNCRLFGFSLKTDEASKLEEPIQRALVSPLDIFHSGMTSHQTFPPTD-------- 700
Query: 471 FKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
K + +SP S Q S R TKV Q VGRA+DLT L GYD LI ELE
Sbjct: 701 ---PKISGIHLSPNSGGSLQP---STRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELER 754
Query: 531 MFDIKGQLHT-RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
+ D++G L R W++VYTD+ DMMLVGD+PW EFC++V +I I + ++V
Sbjct: 755 LLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIVSKIHIFTREEV 806
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/297 (49%), Positives = 195/297 (65%), Gaps = 9/297 (3%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTT-PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ +TDEVYA++TL P + ++ T RP+ F K LTASDTSTHGGFSV
Sbjct: 70 LADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSV 129
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KR
Sbjct: 130 PRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKR 189
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 190 LLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFT 249
Query: 180 VYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
+YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 250 IYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDP 309
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 291
WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 310 VRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 363
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 978 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1066
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 184/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYEKEAILASDIGLKQNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + LPPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F++ L KY +A+ + ++GMR++M FE E+S R + GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRGYMGTITGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 325 WKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVV 358
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1008 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1066
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1067 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1097
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/297 (49%), Positives = 192/297 (64%), Gaps = 9/297 (3%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ +TDEVYA++TL P E RP+ F K LTASDTSTHGGFSV
Sbjct: 87 LADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSV 146
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KR
Sbjct: 147 PRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKR 206
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F
Sbjct: 207 LLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFT 266
Query: 180 VYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
+YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 267 IYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDP 326
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 291
WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 327 VRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 380
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 995 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1083
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 188/276 (68%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVY Q+TL P S + S +P+ F K LTASDTSTHGGFSV
Sbjct: 89 ADPETDEVYVQMTLQPVSSFDKDALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVP 148
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 149 RRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 208
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 209 FAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 268
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
YY PR S+F+I L KY +AV +N+ ++GMR++M FE E+S RR GT+ G+ D +
Sbjct: 269 YYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMGTITGISDLDAV 328
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE + R +RVS WEIEP A
Sbjct: 329 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA 364
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R W++VYTD E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHEND 1059
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/294 (50%), Positives = 198/294 (67%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TD+VYAQITL P PS + +S +P F K LTASDTSTHGGFSV
Sbjct: 73 ADPQTDQVYAQITLQPLPSFDKDALLRSDLALESTKPPPDFFCKQLTASDTSTHGGFSVP 132
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W+F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 133 RRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSLFVSGKRL 192
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 193 FAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTV 252
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY ++V +++ ++GMR++M FE EDS RR GTV G+ D P
Sbjct: 253 FYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTGISDLDPV 312
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + + RVS WEIEP A + P ++KRPR
Sbjct: 313 QWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 364
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 992 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMS 1081
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 192/276 (69%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYA++TL P S + + S +P+ F K LTASDTSTHGGFSV
Sbjct: 94 ADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNKPQPEFFCKQLTASDTSTHGGFSVP 153
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLHG W+F+HI+RGQP+RHLLTTGWS F++ KRL
Sbjct: 154 RRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWSLFISGKRL 213
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 214 LAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHASANNSPFTV 273
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L KY AV +++ + GMR++M FE EDS RR+ GTV+GV D S
Sbjct: 274 FYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYMGTVIGVSDLDSV 333
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE + R RVS WEIEP A
Sbjct: 334 RWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D
Sbjct: 984 RTYTKVYKRG-AVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 182/274 (66%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E L +G+R RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F++ L KY + + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVRRYMGTITGINDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK S+WR+++V WDE + RP RVS WEIEP V
Sbjct: 325 WKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVV 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1003 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHEND 1061
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1062 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1092
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/300 (48%), Positives = 193/300 (64%), Gaps = 12/300 (4%)
Query: 1 MAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGG
Sbjct: 87 LADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 146
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 147 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 206
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 207 GKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNS 266
Query: 177 MFVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 267 QFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISD 326
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 291
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 327 LDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 383
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 998 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1086
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/274 (51%), Positives = 183/274 (66%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 71 ADTETDEVYAQMTLQPVNKYDQEALLLSEMGLKQNRQPAEFFCKTLTASDTSTHGGFSVP 130
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+A+DLH W F+HI+RGQP+RHLLTTGWS F++SKRL
Sbjct: 131 RRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTTGWSVFISSKRL 190
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 191 CAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTI 250
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ GV D P
Sbjct: 251 FYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMGTITGVSDLDPIR 310
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 311 WKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 344
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T +GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 997 RTYTKVQKRG-SVGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1055
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
++LVGDDPW EF + V+ I I S +V++MS L
Sbjct: 1056 ILLVGDDPWEEFVSCVQSIKILSCAEVQQMSLNGDL 1091
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/272 (51%), Positives = 186/272 (68%), Gaps = 7/272 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS--FSKVLTASDTSTHGGFSV 59
A++ETDE+YAQ+TL P S+ + P P + K S F K LTASDTSTHGGFSV
Sbjct: 103 ADKETDEIYAQMTLQPVHSETD-VFPIPTLGAYTKSKHPSEYFCKNLTASDTSTHGGFSV 161
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+R QP+RHLLTTGWS FV +KR
Sbjct: 162 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 221 LKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAAHAASSGGSFT 280
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
VYY PRT S F+I L +Y A + +VGMR+ M FE E+S +RR +GT+VG+ D+ P
Sbjct: 281 VYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKRRCTGTIVGISDYEPM 340
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 341 RWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 832 RTYTKVQKLG-SVGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 890
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I + +V++MS
Sbjct: 891 VLLVGDDPWEEFINCVRCIRILAPSEVQQMS 921
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/331 (46%), Positives = 210/331 (63%), Gaps = 17/331 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 107 ADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGFSVP 166
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + LPPLD P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV KRL
Sbjct: 167 RRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRL 226
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 227 FAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTI 286
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I K+ +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 287 FYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGITDLDPV 346
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR-LSM 293
WK+S+WR+L+V WDE A+ R +RVS WEIEP A P + QP KRPR +
Sbjct: 347 RWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPI---AAPFFICPQPFFGV-KRPRQIDD 402
Query: 294 EVPPLDLPSAASAPW-----SARLAQSHNLT 319
E ++ + PW + AQ+HN T
Sbjct: 403 ESSEMENLFKRAMPWLGEEICIKDAQTHNTT 433
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1014 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1103
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 108 ADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRPQNEFFCKTLTASDTSTHGGFSVP 167
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 168 RRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 227
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 228 FAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHADANNSPFTI 287
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 288 FYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITGISDLDPV 347
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 348 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 383
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D E D
Sbjct: 1015 RTFTKVYKRG-AVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDD 1073
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1074 ILLLGDDPWEEFVNCVKYIRILSPQEVQQMS 1104
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/284 (50%), Positives = 188/284 (66%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + V F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPVEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/299 (48%), Positives = 192/299 (64%), Gaps = 12/299 (4%)
Query: 2 AEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGGF
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGF 62
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 63 SVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSG 122
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 123 KRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ 182
Query: 178 FVVYYKPR--TSQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F +YY PR TS+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 183 FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 242
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRL 291
P WK S WR+++V WDE A R RVS WEIEP +A P + P L KRPRL
Sbjct: 243 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA---PFFIYPSPLFTAKRPRL 298
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 913 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F V+ I I S Q+ +M
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQM 1001
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 199/315 (63%), Gaps = 11/315 (3%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 85 ADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D P
Sbjct: 265 FFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEV 295
WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR M
Sbjct: 325 WKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPRQPGMPD 381
Query: 296 PPLDLPSA--ASAPW 308
LD+ +A + PW
Sbjct: 382 DELDMENAFKRAMPW 396
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 958 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1016
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1017 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/284 (49%), Positives = 187/284 (65%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 216/354 (61%), Gaps = 62/354 (17%)
Query: 252 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSAR 311
EPASI+RP++VSPWEIEPFV S N+ + V+ KNKRPR EV LD+ AS WS+
Sbjct: 1 EPASISRPNKVSPWEIEPFVNSE--NVPKSVMLKNKRPRQVSEVSALDVGITASNLWSSV 58
Query: 312 LAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQL 371
L Q H Q +T++ W +SP QQ
Sbjct: 59 LTQPHEFAQSCITSQ--------------------------------W-SSP-----QQC 80
Query: 372 FQEAIDDNKNISAWPAHSGHSTPHPSKPN--NDTLLEQVETGRKTETGTSCRLFGIELIN 429
++A +D K S W ++ +S + +K + ND ++ VE +K ET + RLFGI+L++
Sbjct: 81 HRDANEDAKK-SDW-LNNSYSVSNVAKDSTLNDQMVSPVEQ-KKPETTANYRLFGIDLMS 137
Query: 430 HATS-----SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPK 484
+ + +AP + +S T + H SD KS+I+K +EKKQE + SPK
Sbjct: 138 SSLAVPEEKTAPMRPINISKPTMDSH----------SDPKSEISKVSEEKKQEPAEGSPK 187
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKW 544
E QSKQS +S RSRTKVQMQGV VGRA+DL L GY+ LID++E++FDIKG+L +R +W
Sbjct: 188 EVQSKQS--SSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQW 245
Query: 545 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
EIV+TDDEGDMMLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 246 EIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 299
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 199/315 (63%), Gaps = 11/315 (3%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 85 ADTETDEVYAQMTLQPVNKYDREALLASDMGLKINRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 FAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D P
Sbjct: 265 FFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPRL-SMEV 295
WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR M
Sbjct: 325 WKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPRQPGMPD 381
Query: 296 PPLDLPSA--ASAPW 308
LD+ +A + PW
Sbjct: 382 DELDMENAFKRAMPW 396
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GY+ L ++L MF I+GQL + W++VYTD E D
Sbjct: 921 RTYTKVQKRG-SVGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHEND 979
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 980 ILLVGDDPWEEFVNCVQNIKILSSAEVQQMS 1010
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/296 (51%), Positives = 198/296 (66%), Gaps = 9/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P PS + S +P+ F K LTASDTSTHGGFSV
Sbjct: 91 ADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLRSSKPQPEFFCKQLTASDTSTHGGFSVP 150
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH WRF+HI+RGQP+RHLLTTGWS F+ KRL
Sbjct: 151 RRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRHLLTTGWSLFIGGKRL 210
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA + F V
Sbjct: 211 LAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSPFTV 270
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L KY +AV ++ + GMR++M FE EDS RR+ GT++GV D S
Sbjct: 271 FYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGTRRYMGTIIGVSDLDSV 330
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPRL 291
WK+S WR+L+V WDE + R RVS WEIEP TP + P ++K PRL
Sbjct: 331 RWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPV---TTPYFICPPPFFRSKIPRL 383
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R W++VY D E D
Sbjct: 987 RTYTKVYKRG-AVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1076
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/284 (50%), Positives = 189/284 (66%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQNKQPMEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 947 RTFTKVQKRG-SVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 1005
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 1006 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1036
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/296 (50%), Positives = 198/296 (66%), Gaps = 9/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+ L P PS + +P+ F K LTASDTSTHGGFSV
Sbjct: 91 ADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEFFCKQLTASDTSTHGGFSVP 150
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + +P QELVA+DLH WRF+HI+RG+P+RHLLTTGWS F++ KRL
Sbjct: 151 RRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLLTTGWSLFISGKRL 210
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R RQ S++ SSV+SS SMH+GVLA A+ AVA + F V
Sbjct: 211 LAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAAAQAVANNSPFTV 270
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SP 236
+Y PR S+F+I L KY +AV ++ + GM ++M FE EDS RR+ GT++GV D S
Sbjct: 271 FYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGTRRYMGTIIGVSDLDSV 330
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV-QPVLAKNKRPRL 291
WK+S WR+L+V WDE + R RVS WEIEP TP + P ++KRPRL
Sbjct: 331 RWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPV---TTPYFICPPPFFRSKRPRL 383
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+T GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 1001 RTYTKVYKRG-AVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S Q+V++MS
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMS 1090
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 198/296 (66%), Gaps = 11/296 (3%)
Query: 2 AEQETDEVYAQITLLPEPS-QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P PS E + +P+ F K LTASDTSTHGGFSV
Sbjct: 82 ADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQPEFFCKTLTASDTSTHGGFSVP 141
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+H++RGQP+RHLLTTGWS V+ KRL
Sbjct: 142 RRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLTTGWSLVVSGKRL 201
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E + +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 202 FAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 261
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A +++ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 262 FYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 321
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR 290
WK+S+WR+L+V WDE + R +RVS WEIEP A P L+ P + +KRPR
Sbjct: 322 RWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITA---PFLICSSPFFS-SKRPR 373
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY+ L +L F I+GQL R + W++VY D E D
Sbjct: 978 RTYTKVYKRG-AVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1036
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I S Q+V++MS
Sbjct: 1037 VLLVGDDPWEEFVSCVRCIKILSPQEVQQMS 1067
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/276 (50%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYA++TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 105 ADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFFCKTLTASDTSTHGGFSVP 164
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 165 RRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 224
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 225 FAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 284
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 285 FYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPV 344
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 345 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/276 (50%), Positives = 186/276 (67%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYA++TL P S E RP+ F K LTASDTSTHGGFSV
Sbjct: 105 ADLETDEVYARMTLQPVTSYGKEALQLSELALKQARPQNEFFCKTLTASDTSTHGGFSVP 164
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+ A+DLH W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 165 RRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 224
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 225 FAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTI 284
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +AV N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 285 FYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTITGINDLDPV 344
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK+S+WR+L+V WDE A+ R +RVS WEIEP A
Sbjct: 345 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 380
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GY+ L L MF I+GQL R + W++VY D E D
Sbjct: 1042 RTFTKVYKRG-AVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDD 1100
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1101 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1131
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 192/293 (65%), Gaps = 7/293 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P +Q P +P R + F K LTASDTSTHGGFSV
Sbjct: 3 ADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFSVP 62
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL+A+DLH EW+F+HIFRGQP+RHLLTTGWS FV++KRL
Sbjct: 63 RRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRL 122
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VAGD +F+ E +L +G+R +R Q+ MPSSV+SS SMHLG+LA A+HA AT + F +
Sbjct: 123 VAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRFTI 182
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
++ PR S+F+I L KY++AV + + +VGMR++M FE E+ + + + P
Sbjct: 183 FFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTWIPV 242
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
W++S WRS+KV WDE + R +VS WEIEP + P P + KRP
Sbjct: 243 RWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPL--TTFPMYPSPFPLRLKRP 293
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N + KV G R+LD+T Y L EL MF ++G+L R+ W++V+ D E
Sbjct: 682 NGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDREN 740
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S ++V+ M
Sbjct: 741 DVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 771
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/274 (50%), Positives = 184/274 (67%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E + F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G++ RQQ ++ SSVISS SMH+G+LA A+HA + + F +
Sbjct: 205 FAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I KY +A+ N ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVRRYMGTITGITDVDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP RVS W+IEP V
Sbjct: 325 WKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVV 358
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR +D+T GYD L +L MF I+GQL RT+W++VY D E D
Sbjct: 995 RTYTKVQKCG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHEND 1053
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V+KMS
Sbjct: 1054 ILLVGDDPWEEFVSCVQSIKILSSAEVQKMS 1084
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 186/284 (65%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVY Q+TL P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T YD L +L MF I+GQL R W++VY D E D
Sbjct: 940 RTFTKVQKRG-SVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHEND 998
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF VK I I S+ +V++MS
Sbjct: 999 ILLVGDDPWEEFVGCVKSIKILSAAEVQQMS 1029
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/229 (56%), Positives = 160/229 (69%), Gaps = 4/229 (1%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+ E +T+EVYA+ LLP QNEP+TP+ CP + PRP+ SF K LT SD ++ G SV
Sbjct: 84 LVEHDTEEVYAETILLPNQEQNEPSTPEFCPLEPPRPQYQSFCKALTTSDIKSNWGLSVH 143
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
RK A +C PPLDM Q PTQEL+ DL G EWRFKH+F+GQPRRHLL GWSTFVTSK+L
Sbjct: 144 RKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLLKHGWSTFVTSKKL 203
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD VFLR E G+LHVG+R L+ Q +S+ SS S QSM GVLA ASHA AT+++F V
Sbjct: 204 LAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLAVASHAFATRSLFSV 262
Query: 181 YYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
YYKP R+SQFI+SL+ Y E N+ VG + + DS +R SG
Sbjct: 263 YYKPCYNRSSQFIMSLSNYFEGGNHGPGVGTISRTQHTSLDSHVKRTSG 311
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 210/333 (63%), Gaps = 19/333 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 107 ADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLTASDTSTHGGFSVP 166
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + LPPLD P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV KRL
Sbjct: 167 RRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVGGKRL 226
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R +RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 227 FAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAAANNSPFTI 286
Query: 181 YYKPRT----SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
+Y PR ++F+I K+ +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 287 FYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTITGITDLD 346
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV--QPVLAKNKRPR-L 291
P WK+S+WR+L+V WDE A+ R +RVS WEIEP A P + QP KRPR +
Sbjct: 347 PVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPI---AAPFFICPQPFFGV-KRPRQI 402
Query: 292 SMEVPPLDLPSAASAPW-----SARLAQSHNLT 319
E ++ + PW + AQ+HN T
Sbjct: 403 DDESSEMENLFKRAMPWLGEEICIKDAQTHNTT 435
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY+ L + MF I+GQL R + W++VYTD E D
Sbjct: 1016 RTFTKVYKRG-AVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V++MS
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMS 1105
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/294 (49%), Positives = 190/294 (64%), Gaps = 8/294 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 85 ADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L + +R RQ ++ SSVISS SMH+G+LA A+HA A + F +
Sbjct: 205 IAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
++ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV GV D P
Sbjct: 265 FFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGVSDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPR 290
WK S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 325 WKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVI---TPFYICPPPFFRPKYPR 375
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR--TKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L ++L MF I+GQL + W++VYTD E D
Sbjct: 892 RTYTKVQKRG-SVGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHEND 950
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 951 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 981
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/284 (49%), Positives = 187/284 (65%), Gaps = 7/284 (2%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+ L P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R +R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE EDS RR+ GT+ G+ D P
Sbjct: 266 FYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPLR 325
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
WK+S WR+L+V WDE + R RVS WEIEP ATP + P
Sbjct: 326 WKNSHWRNLQVGWDESTASERRTRVSIWEIEPV---ATPFYICP 366
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GY+ L +L MF I+GQL RT W++VY D E D
Sbjct: 939 RTFTKVQKRG-SVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHEND 997
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + VK I I SS +V++MS
Sbjct: 998 ILLVGDDPWEEFVSCVKSIKILSSVEVQQMS 1028
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 207/318 (65%), Gaps = 18/318 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+TL P S+ + P A S P + F K LTASDTSTHGGFSV
Sbjct: 107 ADKDTDEVYAQMTLQPVNSETDVFPIQSLGSYAKSKHPAEY-FCKNLTASDTSTHGGFSV 165
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 166 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 225
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L VGVR QQ+++ SSV+S+ SMH+GVLA A+HA ++ + F
Sbjct: 226 LKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAAAAHAASSGSSFT 285
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+YY PRT S F++ + +Y +A+ + +VGMR M E E+S +RR +GT+VGV D P
Sbjct: 286 IYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGKRRHTGTIVGVSDSDPM 345
Query: 237 HWKDSKWRSLKVQWD--EPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKN-KRPRL 291
W +SKWR+L+V+WD E RP+RVS W+IE TP +V P + N KR L
Sbjct: 346 RWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE------TPENTIVLPSASLNSKRQCL 399
Query: 292 -SMEVPPLDLPSAASAPW 308
VP L++ SA +P+
Sbjct: 400 PGYGVPGLEVASANMSPF 417
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR++D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 851 RTYTKVQKLG-SVGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDYEND 909
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/272 (50%), Positives = 183/272 (67%), Gaps = 14/272 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP-TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A++++DE+YAQ++L P S+ + PD + + F K LTASDTSTHGGFSV
Sbjct: 111 ADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLNRSKHPAEFFCKTLTASDTSTHGGFSVP 170
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SKRL
Sbjct: 171 RRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRL 230
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A +T F++
Sbjct: 231 RAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLI 290
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR ++F+I L KY +A+ + + GMR+ M FE EDS +R D P
Sbjct: 291 FYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR---------SDMDPL 341
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
W SKWR+L+V+WDEP +P RVSPW+IE
Sbjct: 342 RWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGSKL 590
W++VY D E D++LVGDDPW EF V+ I I S +V++MS G KL
Sbjct: 408 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMKL 455
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 164/398 (41%), Positives = 224/398 (56%), Gaps = 23/398 (5%)
Query: 2 AEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGGF
Sbjct: 87 ADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASDTSTHGGF 146
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS F++
Sbjct: 147 SVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTGWSLFISG 206
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM 177
KRL+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A +
Sbjct: 207 KRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSQ 266
Query: 178 FVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 267 FTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESGTRRYMGTITGISDL 326
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR-- 290
P WK S+WRS++V WDE A R RVS WEIEP +A P + P L KR R
Sbjct: 327 DPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIA---PFFIYPSPLFTAKRARQP 383
Query: 291 --LSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSN 348
+ E +D + PW +L + A + + W + + S
Sbjct: 384 GMIDDETSEMDNLFKRTMPWLGEDICKKDLNSQNSIAPGLNLVQSLQWMNMQQNLS---- 439
Query: 349 FMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWP 386
++ T E L S K Q L A D ++ IS P
Sbjct: 440 -LAGTGMQPELLNSLASKHVQNL--SAADISRQISFQP 474
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 975 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1033
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1034 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/285 (48%), Positives = 185/285 (64%), Gaps = 19/285 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A++ETDE+Y Q+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKETDEIYCQMTLQPLHSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLP-------------PLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
R+ A + P P D + P QEL+ +DLH W F+HI+RGQP+RHL
Sbjct: 161 PRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHL 220
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
LTTGWS FV +KRL AGD+ +F+R E +L VGVR RQQ ++ SSV+S+ SMH+GVLA
Sbjct: 221 LTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLA 280
Query: 167 TASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
A+HA ++ F +YY PRT S F+I L +Y +A + +VGMR+ M FE E+S +RR
Sbjct: 281 AAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKRRC 340
Query: 225 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+G +VG+ D+ P W +SKWR+L+V+WDE RP+RVS W+IE
Sbjct: 341 TGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ G +VGR +D+T Y L + MF ++G+L + W++VY D E D
Sbjct: 855 RTYTKVQKLG-SVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDYEND 913
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 914 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 944
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 195/294 (66%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 104 ADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVP 163
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 164 RRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 223
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 224 FAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTI 283
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 284 FYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 343
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 344 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 395
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 363 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 883 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 934
Query: 422 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 935 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 986
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 987 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1045
Query: 538 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1046 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1095
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/294 (48%), Positives = 195/294 (66%), Gaps = 7/294 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 107 ADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVP 166
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 167 RRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 226
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 227 FAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTI 286
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 287 FYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV 346
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 347 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 363 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 886 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 937
Query: 422 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 938 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 989
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 990 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1048
Query: 538 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1049 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1098
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 193/299 (64%), Gaps = 12/299 (4%)
Query: 1 MAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGG
Sbjct: 89 LADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDTSTHGG 148
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 149 FSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVS 208
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 209 GKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNS 268
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 269 QFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGISD 328
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KRPR
Sbjct: 329 MDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 384
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL R W++VY D E D
Sbjct: 977 RTYTKVHKRG-AVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKD 1035
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F N V+ I I S Q+ ++M
Sbjct: 1036 VLLVGDDPWEDFVNCVRCIRILSPQEERQM 1065
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 183/274 (66%), Gaps = 4/274 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGF V
Sbjct: 85 ADVETDEVYAQMTLQPVSKYDKEALLASDLGQKQSRQPTEFFCKTLTASDTSTHGGFFVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVA+DLH W F+HI+RGQP+RHLLTTGWS FV++KR+
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRI 204
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
GD+ +F+R E +L +G+R RQQ ++ SS+ISS SMH+G+LA A+HA A + F +
Sbjct: 205 FTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAAAHAAANNSPFTI 264
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
+Y P S+F+I +KY +A+ + ++GMR++M F E+S RR+ GT+ G+ D P
Sbjct: 265 FYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVRRYMGTITGISDLDPVR 324
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE + RP+RVS WEIEP V
Sbjct: 325 WKNSQWRNLQVGWDESTASERPNRVSIWEIEPVV 358
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 452 ISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSN---RSRTKVQMQGVA 508
+ST + +A S G S+I FK + ++ + + N R+ TKVQ +G +
Sbjct: 885 LSTAAISAQSFGVSNIP--FKPDGSNDIAINDTGILNNGAWTNQNQRMRTYTKVQKRG-S 941
Query: 509 VGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEF 566
VGR++D+T GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF
Sbjct: 942 VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEF 1001
Query: 567 CNMVKRIFICSSQDVKKMS 585
+ V+ I I SS +V++MS
Sbjct: 1002 MSCVQSIKILSSAEVQQMS 1020
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/288 (49%), Positives = 192/288 (66%), Gaps = 15/288 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ET+EVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 369 ADPETEEVYAQMTLQPVNKYDR----DALLASDMGLKINRQPNEFFCKTLTASDTSTHGG 424
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HIFRGQP+RHLLTTGWS FV+
Sbjct: 425 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQPKRHLLTTGWSVFVS 484
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 485 TKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 544
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 545 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDL 604
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 605 DPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP 649
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 132/187 (70%), Gaps = 6/187 (3%)
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS 157
F GQP+RHLLTTGWS FV++KRL AGD+ +F+R G+L +G+R RQQ ++ SSVISS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFE 215
SMH+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 233
Query: 216 GEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
E+ RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP +
Sbjct: 234 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL--- 290
Query: 275 TPNLVQP 281
TP + P
Sbjct: 291 TPFYICP 297
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1347 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHEND 1405
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1406 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1436
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 195/299 (65%), Gaps = 17/299 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 TKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDL 321
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 322 DPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/299 (48%), Positives = 195/299 (65%), Gaps = 17/299 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 TKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDL 321
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 322 DPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 375
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1037 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1095
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1096 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1126
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 193/299 (64%), Gaps = 12/299 (4%)
Query: 1 MAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGG
Sbjct: 86 LADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTHGG 145
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 146 FSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVS 205
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 206 GKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNS 265
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 266 QFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGISD 325
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KRPR
Sbjct: 326 MDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 381
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 463 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 934 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 992
Query: 523 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 993 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1052
Query: 581 VKKM 584
++M
Sbjct: 1053 ERQM 1056
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/299 (47%), Positives = 193/299 (64%), Gaps = 12/299 (4%)
Query: 1 MAEQETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ +TDEVYA++TL P + E RP+ F K LTASDTSTHGG
Sbjct: 86 LADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDTSTHGG 145
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A P LD + P QEL A+DLH W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 146 FSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGWSLFVS 205
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
KRL+AGD+ +F+R +L +G+R RQ ++ SSV+SS SMH+G+LA A+HA A +
Sbjct: 206 GKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHAAANNS 265
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F V+Y PR S+F+I KY +AV +N+ ++GMR++M FE E+S RR+ GT+ G+ D
Sbjct: 266 QFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTITGISD 325
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
P WK+S+WR+++V WDE A R RVS WE+EP +A P + P L KRPR
Sbjct: 326 MDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA---PFFIYPSPLFTAKRPR 381
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 463 GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYD 522
G +DIA + +Q + S++ R+ TKV +G AVGR++D+ GYD
Sbjct: 933 GVADIAFNSIDSSINDIQFLNRNSRAPGPVQQRMRTYTKVHKRG-AVGRSIDINRYSGYD 991
Query: 523 HLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
L ++ MF I+GQL R W++VY D E D++LVGDDPW +F N V+ I I S Q+
Sbjct: 992 ELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQE 1051
Query: 581 VKKM 584
++M
Sbjct: 1052 ERQM 1055
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 198/307 (64%), Gaps = 18/307 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 TKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISD 321
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 322 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Query: 293 MEVPPLD 299
+ LD
Sbjct: 377 GQPGMLD 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1041 RTYTKVQERG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETD 1099
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ + I SS +V++MS
Sbjct: 1100 ILLVGDDPWEEFVNFVQSLKILSSAEVQQMS 1130
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 195/300 (65%), Gaps = 18/300 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 TKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISD 321
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 322 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/300 (48%), Positives = 195/300 (65%), Gaps = 18/300 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 TKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISD 321
Query: 234 FSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 322 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 181/273 (66%), Gaps = 22/273 (8%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE+YAQ++L P ++ + P P RP H F K LTASDTSTHGGFS
Sbjct: 83 ADKDTDEIYAQMSLQPVNTEKDVF---PIPDFGLRPSKHPSEFFCKTLTASDTSTHGGFS 139
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD PTQELV +DLH W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 140 VPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSK 199
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E +L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA A ++ F
Sbjct: 200 RLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHATANRSPF 259
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++Y PR S F+I L K+ +AV + +VGMR+ M FE E+S +RR+ GT+VG+ D
Sbjct: 260 TIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGISDL- 318
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
V+WDEP + +RVS WEIE
Sbjct: 319 ------------VEWDEPGCSDKQNRVSSWEIE 339
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/295 (47%), Positives = 189/295 (64%), Gaps = 12/295 (4%)
Query: 5 ETDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
ETDEVYA++TL P + E +P+ F K LTASDTSTHGGFSV
Sbjct: 89 ETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDTSTHGGFSVP 148
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A P LD + P QEL A+DLH W F+HIFRGQP+RHLLTTGWS F++ KRL
Sbjct: 149 RRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGWSLFISGKRL 208
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 209 IAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSQFTI 268
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I KY +AV N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 269 FYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPV 328
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPR 290
WK+S+WR+++V WDE A R RVS W+IEP +A P + P L KR R
Sbjct: 329 RWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIA---PFFIYPTPLFTAKRAR 380
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GYD L ++ MF I+GQL +R W++VY D E D
Sbjct: 970 RTYTKVHKRG-AVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKD 1028
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++LVGDDPW +F N V+ I I S Q+ +M
Sbjct: 1029 VLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1058
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 154/221 (69%), Gaps = 4/221 (1%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT SD ++ G SV
Sbjct: 88 LVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIKSNWGLSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT GWSTFVTSK+L
Sbjct: 148 LKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWSTFVTSKKL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA ASHA AT+++F V
Sbjct: 208 LAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAFATKSLFFV 266
Query: 181 YYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 218
Y KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 267 YQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 251 bits (641), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 154/221 (69%), Gaps = 4/221 (1%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+ E ET+EVYA+ L+P QNEPT D P D+PRP+ SF K LT SD ++ G SV
Sbjct: 88 LVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIKSNWGLSVP 147
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
K A +C PPLDM Q P QEL+AKDL G EWRFKH +GQPRRH LT GWSTFVTSK+L
Sbjct: 148 LKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWSTFVTSKKL 207
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD VFLR E G+LHVG+R L+ Q S+ +S S QSM + VLA ASHA AT+++F V
Sbjct: 208 LAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAFATKSLFFV 266
Query: 181 YYKP---RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 218
Y KP ++SQFI+S++KY E N+ VGM +M+ E ED
Sbjct: 267 YQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESED 307
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 152/329 (46%), Positives = 199/329 (60%), Gaps = 25/329 (7%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P E R F K LTASDTSTHGGFSV
Sbjct: 85 ADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QE+VAKDLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRL 204
Query: 121 VAGDTFVFL--------------RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA 166
AGD+ +F+ R E +L +G+R RQ ++ SSVISS SMH+G+LA
Sbjct: 205 FAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILA 264
Query: 167 TASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
A+HA A + F +++ PR S+FI+ L KY +A+ + ++GMR++M FE ED RR+
Sbjct: 265 AAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRY 324
Query: 225 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPV 282
GTV G+ D P WK S+WR+L+V WDE + RP RVS WEIEP + TP + P
Sbjct: 325 MGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPP 381
Query: 283 LAKNKRPRL-SMEVPPLDLPSA--ASAPW 308
+ K PR M LD+ +A + PW
Sbjct: 382 FFRPKYPRQPGMPDDELDMENAFKRAMPW 410
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 968 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 1026
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1027 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1057
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 190/288 (65%), Gaps = 15/288 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS-----FSKVLTASDTSTHGG 56
A+ ETDEVYAQ+TL P + D A K++ F K LTASDTSTHGG
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDR----DALLASDMGLKLNRQPNEFFCKTLTASDTSTHGG 141
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV+
Sbjct: 142 FSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVS 201
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
+KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A +
Sbjct: 202 NKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNS 261
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDL 321
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
P WK S+WR+L++ WDE A+ RP RVS W+IEP + TP + P
Sbjct: 322 DPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 973 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1031
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1032 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1062
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 184/276 (66%), Gaps = 5/276 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P E RP++ F K LTASDTSTHGGFSV
Sbjct: 96 ADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQMEFFCKTLTASDTSTHGGFSVP 155
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + P LD + P QEL A+D+H W F+HIFRGQP+RHLLTTGWS FV+ K+L
Sbjct: 156 RRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTTGWSLFVSGKKL 215
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 216 FAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTI 275
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S +F+I KY +A+ +N+ ++GMR++M E E+ RR+ GT+ G+ D P
Sbjct: 276 FYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRYMGTITGISDLDPV 335
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVA 272
WK S+WRSL+V WDE A+ R +RVS WEIEP A
Sbjct: 336 RWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAA 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D+ GY L L MF I+GQL R + W++VYTD E D
Sbjct: 1008 RTFTKVYKRG-AVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1097
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 195/297 (65%), Gaps = 12/297 (4%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P + +N D + +P F K LTASDTSTHGGFSV
Sbjct: 86 ADPETDEVYAQMTLQPVNKYDRNALLASDMGLKLNRQPN-EFFCKTLTASDTSTHGGFSV 144
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QELVAKD+H W F+HI+RGQP+RHLLTTGWS FV++KR
Sbjct: 145 PRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKR 204
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH+GVLA A+HA A + F
Sbjct: 205 FFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFT 264
Query: 180 VYYKPR---TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
++Y PR ++F++ L KY +A+ + ++GMR++M FE E+ RR+ GTV G+ D P
Sbjct: 265 IFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVRRYMGTVTGISDLDP 324
Query: 237 -HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
W++S+WR+L++ WDE A+ RP RVS W+IEP + TP + P RPR S
Sbjct: 325 VRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFYICP--PPFFRPRFS 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 1038 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 1096
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 1097 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1127
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/312 (46%), Positives = 199/312 (63%), Gaps = 17/312 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R E +L +GVR RQQ+ + SSV+S+ SMH+GVLA A+HA ++
Sbjct: 221 LKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSAFGHS 280
Query: 180 -VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
++ S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+ P
Sbjct: 281 WNLHRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPMR 340
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR----PRL 291
W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N + P
Sbjct: 341 WPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCLPGY 394
Query: 292 SMEVPPLDLPSA 303
+ VP +++ SA
Sbjct: 395 GVSVPGMEIGSA 406
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 851 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 909
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 910 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 191/312 (61%), Gaps = 17/312 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTASDT 51
A+ TDEVYA++ L+ + D D K H+ F K LTASDT
Sbjct: 80 ADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTASDT 139
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTTGW 199
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +++
Sbjct: 200 SSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVANS 259
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G ++
Sbjct: 260 LDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF-GLII 318
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ + P HW SKW+SL ++WD + +RVSPW+IE +S LV L+ +
Sbjct: 319 GISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSV---LVTHRLSSSVS 375
Query: 289 PRLSMEVPPLDL 300
R + PP DL
Sbjct: 376 KRTKLCFPPSDL 387
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 195/315 (61%), Gaps = 21/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPK--VHSFSKVLTASDT 51
A+ TDEVYA++ L+ E E D D R +H F K LTASDT
Sbjct: 78 ADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S + L+ ++
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSAVVNS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S+FI+ K+L+++N F +GMR+K+++ ED ERR SG +
Sbjct: 258 LKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGMIT 316
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ + P W SKW+SL V+W++ +R+SPWEIE + + ++ Q + A + +
Sbjct: 317 GINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE--IVGGSVSIAQSLSASSSK 374
Query: 289 -----PRLSMEVPPL 298
P+ +++VP L
Sbjct: 375 RTKLCPQGNLDVPTL 389
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 191/312 (61%), Gaps = 17/312 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTASDT 51
A+ TDEVYA++ L+ + D D K H+ F K LTASDT
Sbjct: 80 ADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTASDT 139
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTTGW 199
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +++
Sbjct: 200 SSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVANS 259
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G ++
Sbjct: 260 LDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF-GLII 318
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 319 GISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSSVS 375
Query: 289 PRLSMEVPPLDL 300
R + PP DL
Sbjct: 376 KRTKLCFPPSDL 387
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 198/318 (62%), Gaps = 27/318 (8%)
Query: 2 AEQETDEVYAQITLLPEP-----------SQNEPTTPDPCPADSPRPK--VHSFSKVLTA 48
A+ TDEVYA++ L+ E ++ E T D D R + F K LTA
Sbjct: 82 ADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTED---GDGERKSRMLQMFCKTLTA 138
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SDTSTHGGFSV R+ A +C PLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLT
Sbjct: 139 SDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 198
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATA 168
TGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS S + L+
Sbjct: 199 TGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMNALSAV 258
Query: 169 SHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSG 226
++++ +++F + Y PR S+FI+ K+L+++N+ F +GMR+K+++ ED ERR SG
Sbjct: 259 ANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDVNERR-SG 317
Query: 227 TVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA- 284
+ GV + P W S WRSL V+W++ +R+SPWEIE + + ++ Q + A
Sbjct: 318 MITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE--IVGGSVSIAQSLPAS 375
Query: 285 KNKRPRL----SMEVPPL 298
+KR +L +++VP L
Sbjct: 376 SSKRTKLCSQSNLDVPTL 393
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 179/268 (66%), Gaps = 11/268 (4%)
Query: 39 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 98
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+
Sbjct: 8 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIY 67
Query: 99 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 158
RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ +S
Sbjct: 68 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSN 127
Query: 159 SMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
S + L+ ++++ +++F + Y PR S+FII K+L+++N F +GMR+K+++
Sbjct: 128 SSKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGS 187
Query: 217 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
ED ERR SG + G+ D P W SKW+SL V+W++ +R+SPWEIE + +
Sbjct: 188 EDVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE--IVGGS 244
Query: 276 PNLVQPVLAKNKR-----PRLSMEVPPL 298
++ Q + A + + P+ +++VP L
Sbjct: 245 VSIAQSLSASSSKRTKLCPQGNVDVPTL 272
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 250/467 (53%), Gaps = 60/467 (12%)
Query: 162 LGVLATASHAVATQTMFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
GVLA+ASHA+ T ++FVVYY+PR SQ +I+S+NKY A F VGMR++M FE ED
Sbjct: 1 FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDV 60
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR-PDRVSPWEIEPFVAS--ATP 276
P ++F GT+VG DFSP W S+W+SLKVQWD+ +I P+RVSPWEI+ S A
Sbjct: 61 PVKKFFGTIVGDGDFSPQWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIS 120
Query: 277 NLVQPVLAKNKRPRLSMEVPPLDLPSAASAP--WSARLAQSHNLTQLSVTAEDKRIDN-- 332
L+Q AKNKRPR + E ++LPS W + + Q H T + +++ RI
Sbjct: 121 TLLQSS-AKNKRPRETNE--NMNLPSQEPTQEFWLSGVTQQHERTYVG-SSDPNRISGSG 176
Query: 333 --HVAWHHKHSDFSS-NSNFMSRTQ---SDGEWL---------TSPRV-KFSQQLFQEAI 376
+ W +H+ + + +S+ + +T DG W SP + + +Q+L + A
Sbjct: 177 YHQILWPSEHAGYGAMSSSSVCQTPLGLGDG-WFKDFNTSSQGVSPTLSEITQKLNRVAS 235
Query: 377 DDNKNISAWPAH--SGHSTPHPSK--------PNNDTLLEQV-----ETGRKTETGTSCR 421
+ + W G+ P+ P L EQV + K + R
Sbjct: 236 SEGRAPPPWATALCGGYRAEEPTSKLSCNATLPLPSPLTEQVAPYLLKVAEKVKGPGMVR 295
Query: 422 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
LFG+ L+ + ++A + V + T I ++ + S + K E
Sbjct: 296 LFGVNLMENTNNAAAATAGNASVGAGETSARITGSVEGSGQLSAFSKVTKVVNE------ 349
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 539
SP+E QS+QS + R+R KVQM G AVGRA+DL +L GY+ L +ELE+MF+IK
Sbjct: 350 --SPREIQSQQSSI--GRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIK---D 402
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ +++ + D+EGD M VGDDPW EFC MV++I I +D K M P
Sbjct: 403 IKQNFKVAFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDP 449
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 191/312 (61%), Gaps = 17/312 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTASDT 51
A+ TDEVYA++ L+ + D D K H+ F K LTASDT
Sbjct: 80 ADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTASDT 139
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTTGW 199
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +++
Sbjct: 200 SSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVANS 259
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G ++
Sbjct: 260 LDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDANERSF-GLII 318
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 319 GISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSSVS 375
Query: 289 PRLSMEVPPLDL 300
R + PP DL
Sbjct: 376 KRTKLCFPPSDL 387
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/312 (41%), Positives = 191/312 (61%), Gaps = 17/312 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-------PCPADSPRPKVHS---FSKVLTASDT 51
A+ TDEVYA++ L+ + D D K H+ F K LTASDT
Sbjct: 80 ADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTASDT 139
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTTGW 199
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++ L +L+ +++
Sbjct: 200 SSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVANS 259
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ ER F G ++
Sbjct: 260 LDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANERSF-GLII 318
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V L+ +
Sbjct: 319 GISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VTHRLSSSVS 375
Query: 289 PRLSMEVPPLDL 300
R + PP DL
Sbjct: 376 KRTKLCFPPSDL 387
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/272 (48%), Positives = 176/272 (64%), Gaps = 10/272 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+TL +P E R V F K LTASDTSTHGGFSV R
Sbjct: 123 ADAETDEVYAQMTL--QPYDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTHGGFSVPR 180
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD + P QE+VA+DLH W F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 181 RAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLF 240
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+ +F+R E +L +G+R RQQ ++ SSVIS SMH+G+LA A+HA A + F ++
Sbjct: 241 AGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAAHAAANNSPFTIF 300
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWK 239
Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ +
Sbjct: 301 YNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISELRCCAM 360
Query: 240 DSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
+ K +P++ RP RVS WEIEP V
Sbjct: 361 E------KFTMAQPSAGERPSRVSIWEIEPVV 386
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 1056 RTYTKVQKRG-SVGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1114
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1115 ILLVGDDPWEEFVSCVQSIKILSSAEVQQMS 1145
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/311 (44%), Positives = 180/311 (57%), Gaps = 28/311 (9%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTP------DPCPADSPRPKV----HSFSKVLTASDT 51
AE TDEVYAQ++LLPE E D D K H F K LTASDT
Sbjct: 107 AETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDT 166
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD +Q P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTTGW
Sbjct: 167 STHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 226
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLRG++G+L +GV R+ S + +++ + + T +H
Sbjct: 227 SAFVNKKKLVSGDAVLFLRGDDGKLRLGV----RRASQIEGTLMPYRPIVFSAFTTTNHN 282
Query: 172 VATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
A+ S FII K+L+ V+ F +GMR+K R E ED+ ERR G + G+
Sbjct: 283 WASW-----------SNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASERRSPGIITGI 331
Query: 232 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
D P W SKWR L V+WD+ + RVSPWEIEP + + N V KR R
Sbjct: 332 SDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP--SGSISNSGSFVTTGPKRSR 389
Query: 291 LSMEVPPLDLP 301
+ D+P
Sbjct: 390 IGFSSGKPDIP 400
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 171/242 (70%), Gaps = 4/242 (1%)
Query: 35 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 94
PRP+ F K LTASDTSTHGGFSV R+ A + PPLD + P QE+ A+DLH W F
Sbjct: 93 PRPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTF 152
Query: 95 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 154
+HI+RGQP+RHLLTTGWS FV+ KRL+AGD+ +F+R E +L +G R RQ +++ SSV
Sbjct: 153 RHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSV 212
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYK 211
+SS SMH+G+LA A+HA A + F ++Y PR S +F++ KY +A+ N+ ++GMR++
Sbjct: 213 LSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFR 272
Query: 212 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
M FE E+ RR+ GT+ G+ D P WK+S+WR+++V WDE A+ R +RVS WEIEP
Sbjct: 273 MMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPV 332
Query: 271 VA 272
A
Sbjct: 333 AA 334
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGD 554
R+ TKV +G AVGR++D++ GYD L L MF ++GQL R + W++VY D E D
Sbjct: 842 RTFTKVYKRG-AVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDD 900
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++L+GDDPW EF N VK I I S Q+V+++S
Sbjct: 901 ILLLGDDPWEEFVNCVKCIRILSPQEVQQIS 931
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/264 (45%), Positives = 174/264 (65%), Gaps = 7/264 (2%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+R
Sbjct: 33 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYR 92
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 159
GQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++ ++
Sbjct: 93 GQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTD 152
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
L +L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E E
Sbjct: 153 SKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENE 212
Query: 218 DSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
D+ ER F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S +
Sbjct: 213 DANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS- 270
Query: 277 NLVQPVLAKNKRPRLSMEVPPLDL 300
V L+ + R + PP DL
Sbjct: 271 --VTHRLSSSVSKRTKLCFPPSDL 292
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 172/226 (76%), Gaps = 4/226 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPAD--SPRPKVHSFSKVLTASDTSTHGGFSV 59
AE +TDEV+A ITLLP +E ++ + + +V SF+K LT SDTST GGFSV
Sbjct: 66 AEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTSTQGGFSV 125
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
++HA E LPPLD +Q P QEL+AKDLHG EWRF+HI+RGQP+RHLLT GWSTF++SKR
Sbjct: 126 PKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWSTFISSKR 185
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
+VAGD+F+FLRGE+GEL VGVR + ++++ ++V+++ SM LG+L++ASHA++T ++F
Sbjct: 186 VVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAISTGSIFT 245
Query: 180 VYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 223
+++ P TS +FII ++Y+++ ++++G R+ M+FEGE+ E+R
Sbjct: 246 IFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 175/254 (68%), Gaps = 8/254 (3%)
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
F K LTASDTSTHGGFSV R+ A + P LD + P QELVAKD+H W F+HI+RGQ
Sbjct: 8 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67
Query: 102 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMH 161
P+RHLLTTGWS FV++KRL AGD+ +F+R +L +G+R RQQ ++ SSVISS SMH
Sbjct: 68 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMH 127
Query: 162 LGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
+GVLA A+HA A + F ++Y PR ++F++ L KY +A+ + ++GMR++M FE E+
Sbjct: 128 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEEC 187
Query: 220 PERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
RR+ GTV G+ D P WK+S+WR+L++ WDE A+ RP RVS W+IEP + TP
Sbjct: 188 GVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVL---TPFY 244
Query: 279 VQPVLAKNKRPRLS 292
+ P RPR S
Sbjct: 245 ICP--PPFFRPRFS 256
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 918 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 976
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 977 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 1007
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 190/315 (60%), Gaps = 21/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEVYA++ L E E + + +H F K LTASDT
Sbjct: 141 ADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDT 200
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 201 STHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGW 260
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+ + +
Sbjct: 261 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADS 320
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ ++F + Y PR S++++ K++++ N+ +GMR+K FE ED ERR SG +
Sbjct: 321 LKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR-SGMIA 379
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ + A + +
Sbjct: 380 GVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLSASSSK 437
Query: 289 -----PRLSMEVPPL 298
P+ +++VP L
Sbjct: 438 RTKLCPQGNLDVPAL 452
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/268 (45%), Positives = 175/268 (65%), Gaps = 11/268 (4%)
Query: 39 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 98
+H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+
Sbjct: 125 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIY 184
Query: 99 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 158
RGQPRRHLLTTGWS+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+
Sbjct: 185 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSE 244
Query: 159 SMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
S + L+ + ++ ++F + Y PR S++++ K++++ N+ +GMR+K FE
Sbjct: 245 SSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFES 304
Query: 217 EDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
ED ERR SG + GV + P W SKWRSL V+W++ +RVSPWEIE + +
Sbjct: 305 EDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGS 361
Query: 276 PNLVQPVLAKNKR-----PRLSMEVPPL 298
++ + A + + P+ +++VP L
Sbjct: 362 ISVAHSLSASSSKRTKLCPQGNLDVPAL 389
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 190/315 (60%), Gaps = 21/315 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNE----------PTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEVYA++ L E E + + +H F K LTASDT
Sbjct: 84 ADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDT 143
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTGW
Sbjct: 144 STHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGW 203
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ SS+S + L+ + +
Sbjct: 204 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADS 263
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ ++F + Y PR S++++ K++++ N+ +GMR+K +E ED ERR SG +
Sbjct: 264 LKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHYESEDVNERR-SGMIA 322
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
GV + P W SKWRSL V+W++ +RVSPWEIE + + ++ + A + +
Sbjct: 323 GVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE--IVGGSISVAHSLSASSSK 380
Query: 289 -----PRLSMEVPPL 298
P+ +++VP L
Sbjct: 381 RTKLCPQGNLDVPAL 395
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 181/316 (57%), Gaps = 48/316 (15%)
Query: 1 MAEQETDEVYAQITLLPEP---------------------SQNEPTTPDPCPADSPRPKV 39
+A +E DEVY Q+TLLP+P PT P
Sbjct: 115 LANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTP---------- 164
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+R
Sbjct: 165 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 224
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQS 159
GQPRRHLLTTGWS FV+ K LV+GD +FLRGE GEL +G+R R ++ +P S+I +Q+
Sbjct: 225 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQN 284
Query: 160 MHLGVLATASHAVATQTMF---VVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ VL+ A++AVAT++MF V+ K + N+ NKF + M ++
Sbjct: 285 SYPNVLSLAANAVATKSMFHGLKVFNKQTHLNMLQDGNQV-----NKFFLKMLPEIH-NL 338
Query: 217 EDSPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
++ SG V G+ D P+ W +SKWR L V+WD+ +RVSPWEI+P V+
Sbjct: 339 QNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVS--- 395
Query: 276 PNLVQPVLAKNKRPRL 291
P L+ PRL
Sbjct: 396 ----LPPLSIQSSPRL 407
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 170/280 (60%), Gaps = 23/280 (8%)
Query: 32 ADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 91
D + H F K LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +
Sbjct: 21 GDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMK 80
Query: 92 WRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 151
WRF+HI+RGQPRRHLLTTGWS+F+ K+LV+GD +FLRG +GEL +GVR + ++
Sbjct: 81 WRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEAL 140
Query: 152 SSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMR 209
++ L +L+ + ++ +++F + + PR S+FI+ K+L+ +N F++G R
Sbjct: 141 LEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTR 200
Query: 210 YKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+K+ + ED+ ER F G + G+ + P W SKW+SL V+WD + +RVSPW+IE
Sbjct: 201 FKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIE 259
Query: 269 PFVASAT-------------------PNLVQPVLAKNKRP 289
+S + NL P+L N RP
Sbjct: 260 RVGSSVSVTHCLSSCVSKRMKLCFPQGNLDAPILDGNGRP 299
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 172/280 (61%), Gaps = 14/280 (5%)
Query: 2 AEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEVYA++ L+ E + + + +H F K LTASDT
Sbjct: 78 ADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ S S L + +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLLAVADS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S++II +K+L+++N F +G R ++ ED ERR SG VV
Sbjct: 258 LKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR-SGMVV 316
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
V + P W SKWRSL V+W++ DRVSPWEIE
Sbjct: 317 HVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 192/314 (61%), Gaps = 17/314 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNE-----------PTTPDPCPADSPRPKVHSFSKVLTASD 50
A+ TDEVYA++ L+ E + + C A+ H F K LTASD
Sbjct: 82 ADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASD 141
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C PPLD P+QEL+A DLHG +W+F+HI+RGQPRRHLLT G
Sbjct: 142 TSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIG 201
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS+FV K+LV+GD +FLRG++G+L +GVR + ++ ++S L +L++ +
Sbjct: 202 WSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVAS 261
Query: 171 AVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
++ +++F + + PR+ S+FI+ + L+++N+ F++GMR+++ +E ED+ ER +G +
Sbjct: 262 SLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERS-AGLI 320
Query: 229 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNK 287
G+ + P W S+W+ L V+WD+ + +RVSPWEIE S + + + + +K
Sbjct: 321 SGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVS--VTHSLSSGSK 378
Query: 288 RPRLSMEVPPLDLP 301
R +L LD P
Sbjct: 379 RTKLHFPQGSLDTP 392
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 171/280 (61%), Gaps = 14/280 (5%)
Query: 2 AEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEV A++ L+ E + A+ +H F K LTASDT
Sbjct: 78 ADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L + +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAVADS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG VV
Sbjct: 258 LKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SGVVV 316
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 317 RISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 171/280 (61%), Gaps = 14/280 (5%)
Query: 2 AEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEV A++ L+ E + A+ +H F K LTASDT
Sbjct: 78 ADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L + +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAVADS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG VV
Sbjct: 258 LKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SGVVV 316
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 317 RISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 173/307 (56%), Gaps = 77/307 (25%)
Query: 2 AEQETDEVYAQITLLPE-----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
E +DE Y +ITL+P+ P++NE + RP V+SF+KVLTASD
Sbjct: 66 VENNSDETYVEITLMPDTTVSKNLQVVIPTENE---------NQFRPIVNSFTKVLTASD 116
Query: 51 TSTHGGFSVLRKHATECLPPL-----DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRH 105
TS G FSV KHA ECLPPL DM+Q P QEL+A DLHG +WRFKH +RG
Sbjct: 117 TSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYRG----- 171
Query: 106 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL 165
D VF R + +SM GV+
Sbjct: 172 ------------------DVIVFAR------------------------YNIESMRHGVI 189
Query: 166 ATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS 225
A+A HA Q MF++ YKPR+SQ+I+S K+L+AVNNKF VG +Y MRFE +D E R+
Sbjct: 190 ASAKHAFDNQCMFIMVYKPRSSQYIVSHEKFLDAVNNKFNVGSKYTMRFEDDDLSETRYF 249
Query: 226 GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT-----PNLVQ 280
GT++G+ DFSPHWK S+WRSL+VQWDE AS RP +VSPW+I+ ++S+ N+V+
Sbjct: 250 GTIIGISDFSPHWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMSSSNVPRELCNMVK 309
Query: 281 PVLAKNK 287
+ +K
Sbjct: 310 KIFIYSK 316
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/280 (44%), Positives = 171/280 (61%), Gaps = 14/280 (5%)
Query: 2 AEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEV A++ L+ E + A+ +H F K LTASDT
Sbjct: 78 ADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L + +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAVADS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG VV
Sbjct: 258 LKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SGVVV 316
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ + P W SKWRSL V+W++ A DRVSPWEIE
Sbjct: 317 RISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 18/314 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKV-HSFSKVLTASDTS 52
A+ TDEVYA++ L+ + + +P++ H F K LTASDTS
Sbjct: 85 ADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTASDTS 144
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
THGGFSV R+ A +C PPLD Q P+QEL+AKDLHG +WRF+HI+RGQPRRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTTGWS 204
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGV-RCLARQQSSMPSSVISSQSMHLGVLATASHA 171
+FV K+LV+GD +FLRG +GEL +G+ R + + + +V SS S + A AS +
Sbjct: 205 SFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQRTLSAVAS-S 263
Query: 172 VATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
++ F V + PR+ S+FI+ K+ +++N+ ++GMR+K+ +E ED+ ER +G +
Sbjct: 264 FRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANERS-TGMIS 322
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKN-K 287
GV + P W SKWR L V+WD R+SPWEIE ++ + A N K
Sbjct: 323 GVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE--RVGGMNSVTHSLSASNSK 380
Query: 288 RPRLSMEVPPLDLP 301
R +LS LD P
Sbjct: 381 RTKLSFPESNLDAP 394
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 191/316 (60%), Gaps = 20/316 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQ---------NEPTTPDPCPADSP-RPKV-HSFSKVLTASD 50
A+ TDEVYA++ L+ E +E + D +P++ H F K LTASD
Sbjct: 79 ADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENKPRMPHMFCKTLTASD 138
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
TSTHGGFSV R+ A +C LD Q P+QELVAKDLHG +WRF+HI+RGQPRRHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYRGQPRRHLLTTG 198
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
WS+FV K+LV+GD +FLRG++GEL +GVR + ++ +++ L L+ +
Sbjct: 199 WSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAVNTNDSKLHTLSAVAS 258
Query: 171 AVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
++ +++F V + PR+ S+FI+ ++ +++N+ F++GMR+K+ E +D+ ER +G +
Sbjct: 259 SLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMRFKVSNESDDANERS-TGLI 317
Query: 229 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AK 285
G+ + P W SKWR L V+WD+ RVSPWEIE S + V L +
Sbjct: 318 SGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIERVGGSIS---VTDCLSASS 374
Query: 286 NKRPRLSMEVPPLDLP 301
+KR +L LD P
Sbjct: 375 SKRAKLYFPQGNLDAP 390
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 185/293 (63%), Gaps = 17/293 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 113 ADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVP 172
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 173 RRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 232
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ + +R E +L +G+R RQ +++ SSV+SS SMH+GVLA A+HA A + F +
Sbjct: 233 FAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTI 292
Query: 181 YYKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
+Y PR S +F+I KY +A+ +N+ ++GMR++M FE E+ RR+ GT+ G+ D P
Sbjct: 293 FYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDP- 351
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 352 ----------VGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 392
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 363 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 880 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 931
Query: 422 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 932 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 983
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 984 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 1042
Query: 538 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1043 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1092
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/293 (46%), Positives = 180/293 (61%), Gaps = 30/293 (10%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYAQ+TL P N R F K LTASDTSTHGGFSV R
Sbjct: 85 ADTETDEVYAQMTLQPVNKLN-------------RQPTEFFCKTLTASDTSTHGGFSVPR 131
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+ A + PPLD + P QE+VAKDLH W F+HI+RG WS FV++KRL
Sbjct: 132 RAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG----------WSVFVSTKRLF 181
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVY 181
AGD+ +F+R E +L +G+R RQ ++ SSVISS SMH+G+LA A+HA A + F ++
Sbjct: 182 AGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIF 241
Query: 182 YKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
+ PR S+F++ L KY +A+ + ++GMR++M FE ED RR+ GTV G+ D P W
Sbjct: 242 FNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRW 301
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP-NLVQPVLAKNKRPR 290
K S+WR+L+V WDE + RP RVS WEIEP + TP + P + K PR
Sbjct: 302 KGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVI---TPFYICPPPFFRPKYPR 351
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 934 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 992
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 993 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1023
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 186/313 (59%), Gaps = 47/313 (15%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+ SMH+GVLA A+HA ++ + F
Sbjct: 221 LKAGDSVLFI-----------------------------SMHIGVLAAAAHAASSGSSFT 251
Query: 180 VYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+YY PRT S F+I + +Y +A + +VGMR+ M FE E+S +RR++GTVVG+ D+ P
Sbjct: 252 IYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKRRYTGTVVGISDYDPM 311
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR----PR 290
W +SKWR+L+V+WDE RP+RVS W+IE TP LV P N + P
Sbjct: 312 RWPNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCLPG 365
Query: 291 LSMEVPPLDLPSA 303
+ VP +++ SA
Sbjct: 366 YGVSVPGMEIGSA 378
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 823 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 881
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I S +V++MS
Sbjct: 882 VLLVGDDPWEEFINCVRCIRILSPSEVQQMS 912
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 72 DMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG--WSTFVTSKRLVAGDTFVFL 129
DM+Q TQ LVAKDL+G EW FKH+FRG P+RH+ T+G WS F T+KRL+ GD FV L
Sbjct: 102 DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLL 161
Query: 130 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQF 189
RGENGEL G+R QQ +PSSVIS+ M GV+A+ +A T+ MF V YKP +SQF
Sbjct: 162 RGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKPSSSQF 221
Query: 190 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 248
+IS +K+++A+NN + VG R++M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLK+
Sbjct: 222 VISYDKFVDAMNNNYIVGSRFRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKI 280
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 79/105 (75%)
Query: 486 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE 545
+++ SCL TKV MQGVA+ RA+DLT + GY+ LI +LEE+FD+K +L TR +WE
Sbjct: 355 TEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWE 414
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
IV+T++EG MLVGDDPW EFCNM KRIFICS +++KKM +K
Sbjct: 415 IVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNKF 459
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 181/274 (66%), Gaps = 9/274 (3%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + E R F K LTASDTSTHGGFSV
Sbjct: 85 ADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQSRQPAEFFCKTLTASDTSTHGGFSVP 144
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPL+MN + L++ +H IF GQP+RHLLTTGWS FV++KRL
Sbjct: 145 RRAAEKIFPPLNMNMNVVI--LISLQIHK---NVHCIFSGQPKRHLLTTGWSVFVSTKRL 199
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
AGD+ +F+R E +L +G+R RQQ ++ SSVISS SMH+G+LA+A+HA A + F +
Sbjct: 200 FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASAAHAAANNSPFTI 259
Query: 181 YYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPH 237
+Y PR S+F+I L KY +A+ + ++GMR++M FE E+S RR+ GT+ G+ D S
Sbjct: 260 FYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVR 319
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
WK+S+WR+L+V WDE A+ RP+RVS WE+EP V
Sbjct: 320 WKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVV 353
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR +D+T GYD L +L MF I+GQL RT W++VY D E D
Sbjct: 965 RTYTKVQKRG-SVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF + V+ I I SS +V++MS
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMS 1054
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 30 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 89
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 80
Query: 90 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 149
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 81 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 140
Query: 150 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 207
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 141 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 200
Query: 208 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 266
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 201 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 259
Query: 267 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
IE S + + + + +KR +L LD P
Sbjct: 260 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 292
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 177/275 (64%), Gaps = 6/275 (2%)
Query: 30 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHG 89
C A+ H F K LTASDTSTHGGFSV R+ A +C PPLD P+QEL+A DLHG
Sbjct: 22 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHG 81
Query: 90 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSS 149
+W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L +GVR + ++
Sbjct: 82 TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 141
Query: 150 MPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVG 207
++S L +L++ + ++ +++F + + PR+ S+FI+ + L+++N+ F++G
Sbjct: 142 ALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIG 201
Query: 208 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 266
MR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+ + +RVSPWE
Sbjct: 202 MRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 260
Query: 267 IEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
IE S + + + + +KR +L LD P
Sbjct: 261 IERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 293
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 157/244 (64%), Gaps = 6/244 (2%)
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKKL 61
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + +A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFSI 121
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
Y PR +S FII +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 298 LDLP 301
D P
Sbjct: 239 ADFP 242
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/236 (50%), Positives = 163/236 (69%), Gaps = 9/236 (3%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHS---FSKVLTASDTSTHGGFS 58
A+++TDE++AQ++L P S+ + P P +P H F K LTASDTSTHGGFS
Sbjct: 83 ADKDTDEIHAQMSLQPVNSEKDVF---PVPDFGLKPSKHPSEFFCKALTASDTSTHGGFS 139
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R+ A + PPLD + P+QELV +DLH W F+HI+RGQP+RHLLTTGWS FV SK
Sbjct: 140 VPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSK 199
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RL AGD+ +F+R E L VGVR RQQ+++PSSV+S+ SMH+GVLA A+HA ++ F
Sbjct: 200 RLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAAAHAAGNRSPF 259
Query: 179 VVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
++Y PR S F+I L K+ + V + +VGMR+ M FE E+S +RR+ GT+VG+
Sbjct: 260 TIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYMGTIVGI 315
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/287 (47%), Positives = 180/287 (62%), Gaps = 29/287 (10%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+ P S +P + F K LTASDTSTHGGFSV
Sbjct: 94 ADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 152
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR------------GQPRRHLL 107
R+ A PPL ++ S+ + LHG IF QP+RHLL
Sbjct: 153 PRRAAERVFPPLVISHSSLQHRSL---LHG-------IFMMSSGNSGISSEASQPKRHLL 202
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT 167
TTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+G+LA
Sbjct: 203 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAA 262
Query: 168 ASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRF 224
A+HA AT + F ++Y PR S+F+I L+KY++AV + + +VGMR++M FE E+S RR+
Sbjct: 263 AAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 322
Query: 225 SGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 323 MGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 369
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 722 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 780
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 781 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 815
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/244 (45%), Positives = 156/244 (63%), Gaps = 6/244 (2%)
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A +C PPLD Q P+QELVAKDLHG EW+F+HI+RGQPRRHLLTTGWS FV K+L
Sbjct: 2 RRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKKL 61
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
V+GD +FLR +GEL +GVR A+ ++ SQ +++ + A+++ F +
Sbjct: 62 VSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFSI 121
Query: 181 YYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
Y PR +S FI+ +K+ + + + F+ GMR+KMR E ED+ E+RF+G VVGV D P
Sbjct: 122 CYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDPVR 181
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W SKWR L V+WD+ ++R +RVSPWEIEP + + P V+ KR R+ +
Sbjct: 182 WPGSKWRCLLVRWDD-LDVSRHNRVSPWEIEP--SGSAPVSSSLVMPSAKRTRVGFPITK 238
Query: 298 LDLP 301
D P
Sbjct: 239 ADFP 242
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 208/648 (32%), Positives = 298/648 (45%), Gaps = 107/648 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKVLTAS 49
+A+ +TDEVYA+I +P P+ + D CP D P SF+K LT S
Sbjct: 66 LADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCP-DKPA----SFAKTLTQS 120
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 121 DANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 180
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------CLARQQSSMP----------- 151
GWSTFV K+LVAGD+ VFLR ENG+L VG+R +R +SS+
Sbjct: 181 GWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNATCA 240
Query: 152 ------SSVISSQSMHLG------------VLATASHAVATQTMFVVYYKPRTS--QFII 191
S + M G VL A A + VVYY PR+S +F +
Sbjct: 241 IPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYY-PRSSTPEFCV 299
Query: 192 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
+ A+ + GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 300 KASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSPWRLLQVA 359
Query: 250 WDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPSA 303
WDEP + RVSPW +E + S P + + P K+ R ++ PLD LPS
Sbjct: 360 WDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKSRFPQQLGFPLDLQFQLPSF 417
Query: 304 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS- 362
+ P L S + LS ++ A H + S+ F ++ QS G +L+S
Sbjct: 418 SGNP----LGPSSPMCCLS---DNTPAGIQGARHAQFGISLSDIQFNNKQQS-GMFLSSL 469
Query: 363 ----PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGT 418
P + S+ + N+NIS G+S P+ LE+ + +K +
Sbjct: 470 QRFNPHSRNSETYLTGHTNSNENISCL-LTMGNSNPN---------LEKSDNVKKHQF-- 517
Query: 419 SCRLFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
LFG I + H + S ++ VS + E + S+ SD+ KK
Sbjct: 518 --LLFGQPILIEQHISHSCSTDA--VSQVINERNSSDESSSKEK---ISDVLLSAPGKKI 570
Query: 477 EQVQ-----VSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
QV+ S +S S + + KV ++ VG LDL+ L Y+ L +L M
Sbjct: 571 SQVKSCGTGFSWHQSLHNTSEIGKDTGPCKVFLESEDVGWTLDLSALCSYEELHGKLANM 630
Query: 532 FDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
F I+ + ++Y D G + +GD+P+ F KR+ I +Q
Sbjct: 631 FGIE---RSEMSSHVLYRDATGSVKQIGDEPFSVFMKTAKRLTILMNQ 675
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 164/289 (56%), Gaps = 59/289 (20%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPAD------------------SPRPKVHSF 42
A+ ETDEVYAQ+TL P P + D C A+ S +P + F
Sbjct: 94 ADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQP-TNYF 152
Query: 43 SKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP 102
K LTASDTSTHGGFSV R+ A PPLD Q P QEL+A+D+H EW+F+HIFRGQP
Sbjct: 153 CKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQP 212
Query: 103 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 162
+RHLLTTGWS FV++KRLVAGD+ +F+ E +L +G+R +R Q+ MPSSV+SS SMH+
Sbjct: 213 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHI 272
Query: 163 GVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 222
G+LA A+HA AT + F ++Y P
Sbjct: 273 GLLAAAAHAAATNSRFTIFYNP-------------------------------------- 294
Query: 223 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
R+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 295 RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 343
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 693 ATRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 751
Query: 553 GDMMLVGDDPWHEFCNMVKRI 573
D++L+GDDPW EF N+ +
Sbjct: 752 NDVLLLGDDPW-EFINIYMNV 771
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 294/648 (45%), Gaps = 114/648 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCP-------ADSPRPKVHSFSKVLTASDTST 53
+A+ ETDEVYA+I+L P PS NE D + K SF+K LT SD +
Sbjct: 65 LADSETDEVYAKISLFPLPS-NELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQSDANN 123
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 124 GGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 183
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-------QSSMPSSVIS---------- 156
FV K+LVAGD+ VFLR E+G+L VG+R R +SS PS +
Sbjct: 184 FVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASCVNPYTG 243
Query: 157 ----------SQSMHLG-------------VLATASHAVATQTMFVVYYKPRTS--QFII 191
S+ + G VL +A+ A Q VVYY PR S +F +
Sbjct: 244 GFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYY-PRASTPEFCV 302
Query: 192 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
+ + ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V
Sbjct: 303 KASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSPWRLLQVT 362
Query: 250 WDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPSA 303
WDEP + RVSPW +E + S P + + P K+ RL + PLD LPS
Sbjct: 363 WDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPPRKKLRLPQHLDFPLDGQFQLPSF 420
Query: 304 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHH--KHSDFS-SNSNFMSRTQSDGEWL 360
+ P L S L LS DN A +H+ F S S+ G +L
Sbjct: 421 SGNP----LGPSSPLCCLS--------DNTPAGIQGARHAQFGISLSDLQLNKLQSGLFL 468
Query: 361 TSPR-----VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTE 415
+S + + S+ + + N+N+S G+S + K +N + V
Sbjct: 469 SSLQRFNSHSRVSESFMKSNTNSNENLSCLLTM-GNSNTNSEKSDNVKRHQFV------- 520
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
LFG ++ S VS ++S ++ +S K+ I
Sbjct: 521 ------LFGQPILTEQQISRSCSTDAVS------QVLSKKLSSDESPEKAKIHDVLGSTP 568
Query: 476 QEQVQVSPKESQSK----QSCLTS----NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
++ Q SP++S S QS T+ + KV ++ VGR LDL+ L Y+ L
Sbjct: 569 EK--QTSPEKSASTGLSWQSLHTTETGLDAGHCKVFLESEDVGRTLDLSVLGSYEELYSR 626
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
L MF I+ + ++Y D G + GD+P+ F KR+ I
Sbjct: 627 LANMFGIE---RSEMLHHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTI 671
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 177/287 (61%), Gaps = 18/287 (6%)
Query: 30 CPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPL------------DMNQST 77
C A+ H F K LTASDTSTHGGFSV R+ A +C PPL D
Sbjct: 21 CDAEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVR 80
Query: 78 PTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELH 137
P+QEL+A DLHG +W+F+HI+RGQPRRHLLT GWS+FV K+LV+GD +FLRG++G+L
Sbjct: 81 PSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLR 140
Query: 138 VGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNK 195
+GVR + ++ ++S L +L++ + ++ +++F + + PR+ S+FI+ +
Sbjct: 141 LGVRRAVQLRNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWR 200
Query: 196 YLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
L+++N+ F++GMR+++ +E ED+ ER +G + G+ + P W S+W+ L V+WD+
Sbjct: 201 LLKSLNHPFSIGMRFRVCYESEDANERS-AGLISGISEVDPIRWPGSRWKCLLVRWDDST 259
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
+ +RVSPWEIE S + + + + +KR +L LD P
Sbjct: 260 DSSHQNRVSPWEIERVGGSVS--VTHSLSSGSKRTKLHFPQGSLDTP 304
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 188/641 (29%), Positives = 280/641 (43%), Gaps = 88/641 (13%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPC----------PADSPRPKVHSFSKVLTAS 49
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT S
Sbjct: 73 LADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADA-REKLSSFAKTLTQS 131
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 132 DANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 191
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA--- 166
GWSTFV K+LVAGD+ VFLR E+GEL VG+R R + + G L+
Sbjct: 192 GWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPGYGALSAFL 251
Query: 167 ----------------------------TASHAVATQTMFVVYYKPRTS--QFIISLNKY 196
AS A + Q VVYY PR S +F++
Sbjct: 252 KDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASV 310
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ N++ GMR+KM FE EDS F GT+ + P W +S WR L+V WDEP
Sbjct: 311 QNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVTWDEPD 370
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQ 314
+ V+PW +E V+S P + P K+ L +P P+ +L
Sbjct: 371 LLQNVKCVNPWLVE-IVSSIPPIHLGPFSPPRKK---------LRMPQHPDFPFDGQL-- 418
Query: 315 SHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQLFQ 373
L+ + + SD + +R G LT ++ K LFQ
Sbjct: 419 ------LNPIFHGNPLGPSNSALRCFSDIAPAGIQGARHAQFGLPLTDHQLSKLHLGLFQ 472
Query: 374 EAIDDNKNISAWPAHSGHSTPHPSKPNNDTL--LEQVETGRKTETGTSCR-----LFGIE 426
+ + P+H S P N+++ L + T + TE + LFG
Sbjct: 473 GGGFNRFDAITPPSHISKGFVISSAPVNESVSCLLTIGTPQATEKSDDRKKPHIMLFGKP 532
Query: 427 LINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES 486
++ ++ + S ++ + SDG + + +
Sbjct: 533 ILTEQQMNSRGSRETFS---------PEVTGNSSSDGNVQKTGNVSDGSGSSICIGFSSQ 583
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWE 545
+ S L KV M+ VGR +DL+ Y+ L +L +MF I K ++ +
Sbjct: 584 GHEASELGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMS----H 639
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ Y D G + G++P+ +F + +R+ I S + + P
Sbjct: 640 LCYRDAAGAVKHTGEEPFSDFMKVARRLTIIESTEGRLQKP 680
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 208/646 (32%), Positives = 294/646 (45%), Gaps = 113/646 (17%)
Query: 1 MAEQETDEVYAQITLLPEP------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 54
+A+ TDEV+A+I+L+P P SQ+ D +++ K SF+K LT SD +
Sbjct: 66 LADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAE-KPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD + P Q L+AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG----------- 163
V K+LVAGD+ VFLR ENG+L VG+R A++ + S SS S H+G
Sbjct: 185 VNQKKLVAGDSIVFLRAENGDLCVGIR-RAKRGVGIGSGPESSPS-HIGWNSNNATSANP 242
Query: 164 ----------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISL 193
VL A A VVYY PR S +F +
Sbjct: 243 YGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYY-PRASTPEFCVKA 301
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
+ A+ + GMR+KM FE EDS F GTV V+ P W +S WR L+V WD
Sbjct: 302 SSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPWRLLQVTWD 361
Query: 252 EPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLD----LPSAAS 305
EP + VSPW +E + S P + + P K+ R ++ PLD LPS +
Sbjct: 362 EPDLLQTVKCVSPWLVE--LVSNMPVIHLSPFSPPRKKLRFPQQLDFPLDGQFQLPSFSG 419
Query: 306 APWSARLAQSHNLTQLS-VTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTS-- 362
P L S L LS T + H + SDF F + QS G +L+S
Sbjct: 420 NP----LGPSSPLCCLSDNTPAGIQGARHAQFGISLSDF----QFKKKLQS-GLFLSSLQ 470
Query: 363 ---PRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
PR K S+ D NKN+S G S P LE+ + +K +
Sbjct: 471 RFNPRTKNSENYPTGHPDSNKNLSCL-LTKGSSNPK---------LEKSDNAKKHQF--- 517
Query: 420 CRLFGIEL-----INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDI-----AK 469
LFG + I+H+ S+ +V + S+ ++ + SD+ K
Sbjct: 518 -LLFGQPILVEQQISHSCSADAFPQV----------VNERNSSDSNREKNSDVLRSAPGK 566
Query: 470 EFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
+ ++K S +S S + K ++ +GR LDL+ L Y+ L +L
Sbjct: 567 QISQEKSCTTGFSWHQSLQNTSENGMDTGHCKAFLESEDLGRTLDLSALHSYEELRRKLA 626
Query: 530 EMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
MF I+ + ++Y D G + +GD+P+ F KR+ I
Sbjct: 627 IMFGIE---RSDMLSHVLYRDVTGAVKQIGDEPFSVFMKTAKRLTI 669
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 194/627 (30%), Positives = 271/627 (43%), Gaps = 80/627 (12%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLTASDT 51
MAE ETDEVYA+I L P S ++ D C DS + K SF+K LT SD
Sbjct: 66 MAEPETDEVYAKIRLTPS-SNSDLMFGDGCGEDSDDRLPNGIESQEKPASFAKTLTQSDA 124
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 125 NNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 184
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHL---- 162
S FV K+LVAGD+ VFLR ENG+L VG+R R + S + S L
Sbjct: 185 SNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGYSGFLREDE 244
Query: 163 -------------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
V+ AS A Q VVYY PR S +F + + A++
Sbjct: 245 SKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYY-PRASTPEFCVRASAVRTAMH 303
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 259
++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 304 IQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWDEPDLLQNV 363
Query: 260 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARLAQSHNL 318
RVSPW +A N+ L+ PR + +P P D P P +
Sbjct: 364 KRVSPW-----LAELVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTGIPLRS 418
Query: 319 TQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSD--------GEWLTSPRVKFSQQ 370
D H + SS+ ++ QS + SP + S
Sbjct: 419 NSPLCCVSDNIPAGIQGARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASPS-RISSG 477
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 430
F ++NIS S +L E ET KT LFG ++
Sbjct: 478 NFMGNTKKSENISCLLTMGNSS---------QSLKESSET--KTPHFV---LFGQLIVTD 523
Query: 431 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 490
SS ++ +++G++ A SDG ++ + + S ++
Sbjct: 524 QQSSQSCSGDTNANSSSDGNL-----GKASSDGSGSALQQNGPMENSSDERSTWYKDHQK 578
Query: 491 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTD 550
+ L KV ++ +GR LDL+ L Y+ L +L MF I+ + ++Y D
Sbjct: 579 TDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIE---SSEMLSNVLYRD 635
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICS 577
G GD+P+ EF +R+ I S
Sbjct: 636 AAGATKHAGDEPFSEFLKTARRLTILS 662
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 207/642 (32%), Positives = 284/642 (44%), Gaps = 101/642 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPKVHSFSKVLTASDTSTHG 55
MA+ ETDEVYA+I L+P + NE D +++P K SF+K LT SD + G
Sbjct: 67 MADPETDEVYAKIRLVPI-ANNELDCEDDGVMGSSGSEAPE-KPASFAKTLTQSDANNGG 124
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 125 GFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 184
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS------------------S 157
K+LVAGD+ VFLR ENG+L VG+R R + P S S
Sbjct: 185 NQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFLREDES 244
Query: 158 QSMHLG-----------------------VLATASHAVATQTMFVVYYKPRTS--QFIIS 192
+ M G V+ A+ A Q VVYY PR S +F +
Sbjct: 245 KLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYY-PRASTPEFCVK 303
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
+ AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V W
Sbjct: 304 ASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTW 363
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDLPSAAS 305
DEP + RVSPW +E + S P + L+ PR + +P P D S
Sbjct: 364 DEPDLLQNVKRVSPWLVE--LVSNMPII---HLSPFSPPRKKLRIPQHPDFPFDGQFPMS 418
Query: 306 APWSARLAQSHNLTQL-SVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR 364
+ S L S L L T + H + SD N+ S G + TS
Sbjct: 419 SFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQS-----GLFPTS-- 471
Query: 365 VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKT--------ET 416
FQ D + I+ +G T H + NN+++ + G + E
Sbjct: 472 -------FQR-FDQHSRIT-----NGIITAH--RKNNESISCLLTMGNSSQNLEKSANEK 516
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAAD--SDGKSDIAKEFKEK 474
LFG ++ S VS + T S A SDG ++ K K
Sbjct: 517 TPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQ-KGK 575
Query: 475 KQEQVQVSPKESQSKQSC-LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
+ V Q Q+ + + KV M+ VGR+LDL+ L Y+ L L MF
Sbjct: 576 PENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFG 635
Query: 534 IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
I+ + T ++Y D G + GD+P+ +F KR+ I
Sbjct: 636 IE---RSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTI 674
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 200/649 (30%), Positives = 280/649 (43%), Gaps = 112/649 (17%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
MA+ E+DEVYA+ITL+P S+++ + K SF+K LT SD + GGFSV
Sbjct: 77 MADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDANNGGGFSV 136
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 137 PRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 196
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS------VISSQSMHLG---------- 163
L+AGD+ VFLR ENG+L VG+R R P S + M G
Sbjct: 197 LIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPYGGFSAFLREDE 256
Query: 164 ----------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISL 193
V+ AV Q V+YY PR S +F +
Sbjct: 257 NKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVIYY-PRASTPEFCVKS 315
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
+ A ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V WD
Sbjct: 316 SLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWD 375
Query: 252 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDLPSAASA 306
EP + RVSPW +E + S P++ L PR + P PLD +
Sbjct: 376 EPDLLQNVKRVSPWLVE--LVSNMPSI---HLTHFSPPRKKLRFPQYPDFPLDAQFSMPT 430
Query: 307 PWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP-RV 365
S + S+ LS DN A +R G L+ P
Sbjct: 431 FSSNLVGPSNPFGCLS--------DNIPAGMQG-----------ARHAQYGLSLSDPHHN 471
Query: 366 KFSQQLFQEAIDDNKNISAWPAHSGH--STPHPSKPNNDTLL---EQVETGRKTET-GTS 419
KF LF + + P S S S N +LL + ET +K++ T
Sbjct: 472 KFQSGLFPAPFPQLDHPATPPKASNDYVSRKRSSSENVSSLLTIAQSTETSKKSDDRKTG 531
Query: 420 CRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEFKEKKQEQ 478
LFG ++ S + G +S I+ + S+G D F +
Sbjct: 532 FTLFGRSILTEQQMSQ----------SCSGDTVSPVITGNSSSEGNQDKMANFSDGSGSA 581
Query: 479 VQVS--PKES--QSKQSCLTSNR--------SRTKVQMQGVAVGRALDLTTLVGYDHLID 526
+ P+ S + Q+ ++R KV M+ VGR LDL+ L YD L
Sbjct: 582 LHQHGLPEHSSCEGYQTYKVNHRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCG 641
Query: 527 ELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+L +MF I+ + + ++Y D G + +GD+P+ +F KR+ I
Sbjct: 642 KLAKMFTIE---DSEMRNHVLYRDATGAVKHIGDEPFSDFTKTAKRLTI 687
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 83 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 142
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 143 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 200
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 201 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 258
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 259 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 150/211 (71%), Gaps = 6/211 (2%)
Query: 83 VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRC 142
+AKDLHG EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ +N +L +G+R
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 143 LARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 200
R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR S+F+I L KY++AV
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 201 -NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSKWRSLKVQWDEPASITR 258
+ + +VGMR++M FE E+S RR+ GT+ G+ D S W +S WRS+KV WDE + R
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 259 PDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
RVS WEIEP + P P + KRP
Sbjct: 181 QPRVSLWEIEPL--TTFPMYPSPFPLRLKRP 209
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 618 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 677
Query: 568 NMVKRIFICSSQDVKKM 584
+ V I I S Q+V++M
Sbjct: 678 STVSCIKILSPQEVQQM 694
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 172/320 (53%), Gaps = 76/320 (23%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKV-----------HSFSKVLTASD 50
AE+ +DEVY Q+ L+PE Q + + + H F K LTASD
Sbjct: 99 AEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPHMFCKTLTASD 158
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG--------QP 102
TSTHGGFSV R+ A +C PPLD +Q P+QELVAKDLHG EW+F+HI+RG QP
Sbjct: 159 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVSLMSHVWQP 218
Query: 103 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL 162
RRHLLTTGWS FV K+LV+GD +FLR
Sbjct: 219 RRHLLTTGWSGFVNKKKLVSGDAVLFLR-------------------------------- 246
Query: 163 GVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 222
A+ + F+V ++K+L++++ ++ GMR++MRFE +D+ ER
Sbjct: 247 ----------ASSSEFIV-----------PIHKFLKSLDYSYSAGMRFRMRFETDDAAER 285
Query: 223 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
R +G +VG+ D P W SKW+ L V+WD+ TR +RVSPWEIEP +++ PN +
Sbjct: 286 RCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LEATRNNRVSPWEIEPSGSASIPNNL-- 342
Query: 282 VLAKNKRPRLSMEVPPLDLP 301
+ A KR R+ + L+ P
Sbjct: 343 MAASLKRTRIGLPSTQLEFP 362
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 278/649 (42%), Gaps = 118/649 (18%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPC----PADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ ETDEVY ++ L+P ++NE D + K SF+K LT SD + GG
Sbjct: 73 MADPETDEVYVKLRLVPL-TRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSDANNGGG 131
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 132 FSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSSFVN 191
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQS------------------SMPSSVIS-- 156
K+LVAGD+ VFLR E +L VG+R R MP S
Sbjct: 192 HKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMPYGGFSAF 251
Query: 157 -----SQSMHLG-------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 196
SQ + G V+ A+ A Q VVYY PR S +F + N
Sbjct: 252 LREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYY-PRASAPEFCVKANLV 310
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 255
A+ ++ GMR+KM FE EDS F GT+ V P W +S WR L+V WDEP
Sbjct: 311 RAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADPRWPNSPWRLLQVTWDEPEL 370
Query: 256 ITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPW--SARL 312
+ RVSPW +E + S P + + + K+PR P S P S L
Sbjct: 371 LQNVKRVSPWLVE--IVSNMPTIHLSHYSTQQKKPRFPQH-PDFSFDGQISLPAFPSNFL 427
Query: 313 AQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLF 372
S+ L AE A H + SN +F K LF
Sbjct: 428 GPSNPFGCL---AESTPAGIQGARHANYGISLSNLHFN---------------KLQSGLF 469
Query: 373 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 432
Q P S NN +++V TG SC L++ +T
Sbjct: 470 QAGFP--------PLDHTASPVLRVSSNNAATMQKVGTGDN----VSC------LLSMST 511
Query: 433 SSAPSEKVP----------VSSLTTEGHIISTISAAADS------DGKSDIAKEFKE--- 473
++ PS+KV ++ TE I SA D DG +D +F +
Sbjct: 512 ATQPSKKVDDVKAPQLVLFGQTILTEQQISLNTSAKTDPTRNNSFDGNADKMCKFSDGFG 571
Query: 474 -----KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDEL 528
+ ++ + Q K++ + KV M+ +GR +DLT L YD L +L
Sbjct: 572 YALHPQGSSLERLQWYKDQQKETMASLETGHCKVFMESEDIGRTMDLTMLGSYDELYRKL 631
Query: 529 EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 575
+MF I+ + ++Y D G + +GD+ + EF +R+ I
Sbjct: 632 ADMFGIEKSVVLS---HMLYRDTTGAVKHIGDEAFSCSEFTKTARRLTI 677
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 157/281 (55%), Gaps = 51/281 (18%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPC-----PADSPRPKV-------HSFSKVLTAS 49
AE +TDEVYAQ++LLPE E + D +V H F K LTAS
Sbjct: 107 AETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMFCKTLTAS 166
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
DTSTHGGFSV R+ A +C PPLD ++ P+QEL+A+DLHG EWRF+HI+RGQPRRHLLTT
Sbjct: 167 DTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTT 226
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATAS 169
GWS FV K+LV+GD +FLRG++G+L +GVR ++ + + S +Q+ + + +
Sbjct: 227 GWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNHNNFSEVA 286
Query: 170 HAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
HA++T + F +YY P++ G +
Sbjct: 287 HAISTNSAFNIYYNPKS--------------------------------------LGIIT 308
Query: 230 GVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
G+ D P W SKWR L V+WD+ + RVSPWEIEP
Sbjct: 309 GISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 272/627 (43%), Gaps = 82/627 (13%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS---------PRPKVHSFSKVLTASDT 51
MA+ ETDEVYA+I L+P + ++ C D+ + K SF+K LT SD
Sbjct: 66 MADPETDEVYAKIRLIPL-NNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKTLTQSDA 124
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 125 NNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 184
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-QSSMPSSVISSQSMHLG------- 163
S FV K+LVAGD+ VFLR ENG+L VG+R R + SS +S + + G
Sbjct: 185 SNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFREDES 244
Query: 164 -------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 202
V+ AS A Q VYY PR S +F + + A+
Sbjct: 245 KLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYY-PRASTPEFCVKASAVRSAIQI 303
Query: 203 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 260
++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 304 QWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLHNVK 363
Query: 261 RVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-PLDLPSAASAPWSARLAQSHNLT 319
RVSPW +E N+ L+ PR + +P P D P P +
Sbjct: 364 RVSPWLVE-----LVSNMPAIHLSPFSPPRKKLRLPQPPDFPLLGQIPMPSFTGNPLRSN 418
Query: 320 QLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS-----DGEWL--TSPRVKFSQQLF 372
D H SS+ ++ Q+ D + L +P + S F
Sbjct: 419 SPLCCVSDNIPAGIQGARHAQFGLSSSDLHFNKLQAGLFPVDFQRLDRAAPPSRISNSNF 478
Query: 373 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 432
++++IS S Q G T+T LFG ++
Sbjct: 479 VGNTQNSESISCLLTMGNSS--------------QGMKGSDTKT-PHILLFGQLIVTDQQ 523
Query: 433 SSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP--KESQSKQ 490
SS ++ +++GH A SDG +++ + P K+ Q
Sbjct: 524 SSQSCSGDTNANSSSDGH-----PGKAISDGSGSASQQNGPLENSSGGRCPWYKDYQKTD 578
Query: 491 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTD 550
L + KV M+ VGR LDL+ L Y+ L +L MF I+ + ++Y +
Sbjct: 579 PGLET--GHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIE---SSEMLSNVLYRN 633
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICS 577
G GD+P+ EF +R+ I S
Sbjct: 634 AAGATKHAGDEPFSEFLKTARRLTILS 660
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 283/640 (44%), Gaps = 94/640 (14%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ ETDEVYA++ L+P + + D + K SF+K LT SD + GGFSV R
Sbjct: 78 ADPETDEVYAKLKLIPLNANDVDYDRDVVGGAETQDKPASFAKTLTQSDANNGGGFSVPR 137
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LV
Sbjct: 138 YCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLV 197
Query: 122 AGDTFVFLRGENGELHVGVR------CLARQQSS-------------------------- 149
AGD+ VFLR ENG+L VG+R C + SS
Sbjct: 198 AGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSPFFREDDNR 257
Query: 150 ----------MPS-SVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKY 196
PS S++ + ++ AS+ A + F V Y PR S +F + +
Sbjct: 258 ISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPRASTPEFCVKASLV 317
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ ++ G+R+KM FE EDS F GT+ + P +W +S WR L+V WDEP
Sbjct: 318 EAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNSPWRLLQVTWDEPD 377
Query: 255 SITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPWS---A 310
+ RVSPW +E + S P + P K+ RL + D P P S +
Sbjct: 378 LLQNVRRVSPWLVE--LVSNMPAIHFSPFSPPRKKLRLPQQP---DFPLDGQIPLSTFPS 432
Query: 311 RLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQ 370
L N Q E A H H S + +S+ QS
Sbjct: 433 NLLGPSNTNQFGCLLESTPAGMQGA-RHAHYGLSLSDLHLSKLQSG-------------- 477
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNND-------TLLEQVETGRKTETGT--SCR 421
LF + + +A P +S KPN T+ ++ +K + G S
Sbjct: 478 LFSTGF-PSLDHAATPMRVSNSITL-QKPNLSENVSCLLTMANSTQSSKKLDVGKTPSLV 535
Query: 422 LFGIELINHATSSAPSEKVPVSSLTT-----EGHIISTISAAADSDGKSDIAKEFKEKKQ 476
LFG +++ S S +S + T +G+ + ++ +D G + + +E
Sbjct: 536 LFGQKILTEQQISPSSSGDTLSPVLTRNCSSDGN-VDKVTNFSDGSGSALHQEGLREHSS 594
Query: 477 -EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
E+ Q Q ++ L KV M+ VGR +DL+ L YD L +L +MF I+
Sbjct: 595 CERFQWCKDNHQETEAGL--EIGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIE 652
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+ ++Y D G + + D+ + +F KR+ I
Sbjct: 653 ---KSEMLSHVLYRDSTGAVKRISDESFSDFTRTAKRLTI 689
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 202/653 (30%), Positives = 279/653 (42%), Gaps = 119/653 (18%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P E + EP P A++ + K+ SF+K LT SD + GG
Sbjct: 96 LADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEA-QEKLASFAKTLTQSDANNGGG 154
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 155 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 214
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV---------------------- 154
K+LVAGD+ VFLR E+GEL VG+R R V
Sbjct: 215 QKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGYGGFSAFLKDEENKM 274
Query: 155 ISSQSMHL---------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
++S +L V+ AS A Q VVYY PR S +F++ A+
Sbjct: 275 MNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYY-PRASTPEFVVKAASMQAAMRIH 333
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 261
+ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 334 WCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKC 393
Query: 262 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQS-HNLTQ 320
VSPW +E V+S P + P K+ L +P P+ L +
Sbjct: 394 VSPWLVE-LVSSIPPIHLGPFSPPRKK---------LRVPQHPDFPFDGHLFNPIFHGNP 443
Query: 321 LSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRV-KFSQQLFQEA---- 375
L + R + D S +R G LT ++ K LFQ
Sbjct: 444 LGPSNSSLRC---------YPDNSPAGIQGARHAQFGLPLTDHQLNKLHLGLFQGGGFNR 494
Query: 376 ---------IDDNKNISAWPAHSGHS------TPHPSKPNNDTLLEQVETGRKTETGTSC 420
I IS+ PAH S TP ++ ++D RKT
Sbjct: 495 LDALTPSSRIPKGCMISSAPAHDSVSCLLTIGTPQSTEKSDD---------RKT---PHI 542
Query: 421 RLFGIELI--NHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKEKKQE 477
LFG ++ TSS + + + + A SDG S I F + E
Sbjct: 543 MLFGKAILTEQQMTSSGSRDTLSSGATANSSPYGNAPKAGNTSDGSGSSICIGFSSQGHE 602
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
+ K V M+ VGR +DL+ V Y+ L L +MF I+
Sbjct: 603 SSDFGLEAGHCK------------VFMESEDVGRTIDLSDFVSYEELYGRLADMFGIE-- 648
Query: 538 LHTRTKWEIV----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
K EI+ Y D G +M G+ P+ +F + +R+ I S + P
Sbjct: 649 -----KEEIISHLRYRDTAGTVMHTGELPFSDFMKVARRLTIISGDSGRLPKP 696
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/648 (29%), Positives = 272/648 (41%), Gaps = 108/648 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDP----CPADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ ETDEVYA+I L P S+ + + K SF+K LT SD + GG
Sbjct: 79 MADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQSDANNGGG 138
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 139 FSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVN 198
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS----VISSQSMHLG--------- 163
K+LVAGD+ VFLR ENG+L +G+R R P S + M G
Sbjct: 199 HKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGFNSFFRED 258
Query: 164 ----------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISL 193
V+ A+ A Q VVYY PR S +F +
Sbjct: 259 GNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYY-PRASTPEFCVKA 317
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
+ A ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V WD
Sbjct: 318 SMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWRLLQVTWD 377
Query: 252 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAASAPWSA 310
EP + RVSPW +E + S P + L+ PR + +P D P + P
Sbjct: 378 EPDLLQNVKRVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRMPQHPDFPLDSQFPLPT 432
Query: 311 RLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQ 370
T D H H + +++ Q+
Sbjct: 433 FSGNLLGPTSPFGCLPDNTPAGMQGARHAHYGLPLSDLRLNKLQT--------------S 478
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ---------VETGRKTETGTS-- 419
LF ++ +P HS H N T+++ + R T+
Sbjct: 479 LF---------LAGFPPPLDHSATHSISSNGPTIVKPSMSESVSCVLTMARSTQNSGKPD 529
Query: 420 ------CRLFGIELINHATSSAPSEKVPVSSLTT-----EGHIISTISAAADSDGKSDIA 468
LFG ++ S S VS + T EG+ + I+ +D G +
Sbjct: 530 NVKTPQLVLFGQPILTEQQISLSSSGDTVSPVLTGNSSSEGN-LDKIANFSDGSGSALHQ 588
Query: 469 KEFKE-KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
+ E E Q Q + L + + ++ + V GR LDL+ L YD L +
Sbjct: 589 QGLPEHSSYEGFQWCKGNRQETEPSLETGHCKVFMESEDV--GRTLDLSLLGSYDELYRK 646
Query: 528 LEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
L +MF I+ ++ T ++Y D G + +GD+P+ +F +R+ I
Sbjct: 647 LADMFGIE---NSETLNNVLYRDIAGIVKHIGDEPFSDFMKTARRLTI 691
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 156/258 (60%), Gaps = 14/258 (5%)
Query: 2 AEQETDEVYAQITLLPE----------PSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
A+ TDEV A++ L+ E + A+ +H F K LTASDT
Sbjct: 78 ADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD NQ P+QELVAKDLHG +W+F+HI+RGQPRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S+FV K+LV+GD +FLRG++GEL +GVR + ++ +S S L + +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAVADS 257
Query: 172 VATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
+ +++F + Y PR S++II K+L+++N+ +G R + ED ERR SG VV
Sbjct: 258 LKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSERR-SGVVV 316
Query: 230 GVEDFSP-HWKDSKWRSL 246
+ + P W SKWRSL
Sbjct: 317 RISEIDPMKWPGSKWRSL 334
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 277/636 (43%), Gaps = 103/636 (16%)
Query: 1 MAEQETDEVYAQITLLP---------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
MA+ E+DEV+A++ L+P E E D +S K SF+K LT SD
Sbjct: 74 MADAESDEVFAKLRLIPLKDDEYVDHEYGDGE----DSNGFESNSEKTPSFAKTLTQSDA 129
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGW 189
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------QQSSMPSSVI 155
S FV K+LVAGD+ VF+R ENG+L VG+R R S SS++
Sbjct: 190 SNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLL 249
Query: 156 ---SSQSMHL---------------GVLATASHAVATQTMFVVYY-KPRTSQFIISLNKY 196
S S+ V+ A+ A++ + VVYY + TS+F +
Sbjct: 250 REDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDA 309
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSA 303
+ RV+PW +E V++ V P+ L PR M +P + +PS
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF 423
Query: 304 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP 363
S P S L + V + R + H + SD + +++R P
Sbjct: 424 PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPPP----PPP 477
Query: 364 RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLF 423
D KN + + +TP NDT ++ + LF
Sbjct: 478 SSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLF 522
Query: 424 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 483
G ++ P E++ T +I T ++ S+ +EF + SP
Sbjct: 523 GKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SP 571
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
S+ KV M+ VGR LDL+ L Y+ L +L +MF IK +
Sbjct: 572 C-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEML 627
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
++Y D G + G++P+ EF +R+ I + Q
Sbjct: 628 SSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQ 663
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 188/652 (28%), Positives = 269/652 (41%), Gaps = 122/652 (18%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHGG 56
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + GG
Sbjct: 73 LADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGGG 131
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 132 FSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFVN 191
Query: 117 SKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV------ 164
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 192 KKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLRE 251
Query: 165 ------------------------LATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 198
+A A+ A FV+ Y PR S +F + +
Sbjct: 252 DENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRA 311
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 256
A+ ++ GM++KM FE +DS F G + V P W +S WR L+V WDEP +
Sbjct: 312 AMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLL 371
Query: 257 TRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASAP 307
RV+PW +E + S P++ + P K+ RL ++P S A P
Sbjct: 372 QNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRP 429
Query: 308 WSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKF 367
S S N+ A H + SD N K
Sbjct: 430 SSPLCCISDNIPAGIQGAR------HAQFGLSSSDLHFN-------------------KL 464
Query: 368 SQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR------ 421
LF + + +A P+ + NN+ + + G T+
Sbjct: 465 QLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPY 524
Query: 422 --LFG--IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
LFG I + + S + +SS SDG + F +
Sbjct: 525 FFLFGQPILIEQQVSQSCSGDTAGISS----------------SDGNPEKTPNFSDGSGS 568
Query: 478 QV-QVSPKESQSKQSCLTSNR-----------SRTKVQMQGVAVGRALDLTTLVGYDHLI 525
Q P+ES S + LT + KV M+ VGR LDL+ L Y+ L
Sbjct: 569 AFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELY 628
Query: 526 DELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
+L MF I+ ++Y D+ G + +GD P+ EF +R+ I +
Sbjct: 629 RKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTARRLTILA 677
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 172/338 (50%), Gaps = 55/338 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ ETDEV+A+I L PE + D A P K SF+K LT SD + GGFS+
Sbjct: 86 LADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANNGGGFSIP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 146 RYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG----------------- 163
VAGD VFLR +GEL VGVR R S+ SS S +G
Sbjct: 206 VAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNSSIRSENQGS 265
Query: 164 -----------------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFA 205
VL A+ AV+ + VVYY + T++F + A+ +
Sbjct: 266 PTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYYPRASTAEFCVKAGLVKRALEQSWY 325
Query: 206 VGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 263
GMR+KM FE EDS F GT+ V+ P W S WR L+V WDEP + +RVS
Sbjct: 326 AGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVS 385
Query: 264 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLP 301
PW++E VA+ L M++PP+ LP
Sbjct: 386 PWQLE-LVAT-----------------LPMQLPPVSLP 405
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 276/657 (42%), Gaps = 124/657 (18%)
Query: 1 MAEQETDEVYAQITLLPEPSQ------------NEPTTPDPCPADSPRPKVHSFSKVLTA 48
MA+ TDEVYA+I L+P N TPD K SF+K LT
Sbjct: 77 MADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPD---------KPASFAKTLTQ 127
Query: 49 SDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 108
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 187
Query: 109 TGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ----------------QSSMPS 152
TG STFV K+LV+GD+ VFLR ENG+L VG+R R ++P
Sbjct: 188 TGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPY 247
Query: 153 SVIS--------------------SQSMHLG--------VLATASHAVATQTMFVVYYKP 184
S S +G V A+ A Q VVYY P
Sbjct: 248 GGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYY-P 306
Query: 185 RTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 240
R S +F + + A+ ++ GMR+KM FE EDS F GT+ V+ P W +
Sbjct: 307 RASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRWPE 366
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LD 299
S WR L+V WDEP + RVSPW +E + S P + L PR M +P D
Sbjct: 367 SPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLTPFSPPRKKMRLPQHPD 421
Query: 300 LPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEW 359
P P + DK H H S + +++ +
Sbjct: 422 FPFEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHLNKLHTGLFP 481
Query: 360 LTSPRV-------KFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGR 412
P + KFS + ++N+S S HST KP++ + +
Sbjct: 482 AGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLTMS-HSTQTSKKPDDVKPPQLI---- 536
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDGKSDIAKEF 471
LFG ++ SL++ G +S ++ + SDG +D
Sbjct: 537 ---------LFGQPILTEQQ----------ISLSSSGDTVSPVLTGNSSSDGNADKMANH 577
Query: 472 KEKKQEQVQVSPKESQSKQSC--LTSNRSRT---------KVQMQGVAVGRALDLTTLVG 520
+ +Q S +E S + NR T KV M+ VGR LDL+ L
Sbjct: 578 SDNSGSALQQSIQERSSCEGFQWYKDNRHETEPHLETGHCKVFMESEDVGRTLDLSLLGS 637
Query: 521 YDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW--HEFCNMVKRIFI 575
YD L +L +MF I ++ T ++Y D G + VGD+P+ +F +R+ I
Sbjct: 638 YDELYRKLADMFGID---NSETLNHVLYRDGTGAVKHVGDEPFSCSDFMKTARRLTI 691
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 184/630 (29%), Positives = 263/630 (41%), Gaps = 107/630 (16%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
MA+ E+DEV+A++ L+P + + + ++ K SF+K LT SD + GGFS
Sbjct: 114 MADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAKTLTQSDANNGGGFS 173
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV K
Sbjct: 174 VPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQK 233
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLAR-----------------------------QQSS 149
+LVAGD+ VF+R E+G+L VG+R R + +S
Sbjct: 234 KLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGSCGYSSLLREDESNS 293
Query: 150 MPSSVIS-----SQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNK 203
+ S S + V+ A+ A+ + VVYY + TS+F + A+
Sbjct: 294 LRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEFCVKALDARAAMRIP 353
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 261
+ GMR+KM FE EDS F GTV V P W +S WR L+V WDEP + R
Sbjct: 354 WCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQVAWDEPDLLQNVKR 413
Query: 262 VSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSAASAPWSA 310
V+PW +E V++ V P+ L PR M +P + +PS S P
Sbjct: 414 VNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIR 467
Query: 311 RLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQ 370
S L + V + R + H + SD + +++R + P SQ
Sbjct: 468 SNPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPPPPQPSALP---LSQP 522
Query: 371 LFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINH 430
L ID + E G G N
Sbjct: 523 LGLRNIDS----------------------------------RNEKGFCFLTMGTTPCND 548
Query: 431 ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQ 490
T S S V L IS G +D A K + S
Sbjct: 549 DTESKKSHIVLFGKLILPEEQIS-------EKGSTDTANTSGGSKLSSSEEGSPCSNKAH 601
Query: 491 SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYT 549
KV M+ VGR LDL+ L Y+ L +L +MF I K ++ + ++Y
Sbjct: 602 DAAGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIQKAEMLS----SVLYR 657
Query: 550 DDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
D G + G++P+ EF +R+ I + Q
Sbjct: 658 DASGAIKYAGNEPFSEFLKTARRLTIVTEQ 687
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 174/294 (59%), Gaps = 36/294 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P P+ + E + +P+ F K LTASDTSTHGGFSV
Sbjct: 92 ADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTASDTSTHGGFSVP 151
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QELVAKDLH W F+HI+RG
Sbjct: 152 RRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG-------------------- 191
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
R E +L +G+R RQ +++ SSV+SS SMH+G+LA A+HA A + F V
Sbjct: 192 ---------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 242
Query: 181 YYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP- 236
+Y PR S+F+I L KY +A +N+ ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 243 FYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPV 302
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
WK+S+WR+L+V WDE + R +RVS WEIEP A + P ++KRPR
Sbjct: 303 RWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFF--ICPPPFFRSKRPR 354
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDEGDMMLV 558
KV +G AVGR++D+T GYD L +L F I+GQL R + W++VY D E D++LV
Sbjct: 988 KVYKRG-AVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLV 1046
Query: 559 GDDPWHEFCNMVKRIFICSSQDVKKMS 585
GDDPW EF N V+ I I S Q+V++MS
Sbjct: 1047 GDDPWEEFVNCVRCIKILSPQEVQQMS 1073
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 155/274 (56%), Gaps = 7/274 (2%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
MA+ E+DEVYA+ITL+P S+++ + K SF+K LT SD + GGFSV
Sbjct: 77 MADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDANNGGGFSV 136
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 137 PRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKK 196
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-GVLATASHAVATQTMF 178
L+AGD+ VFLR ENG+L VG+R R S + V+ AV Q
Sbjct: 197 LIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEAVIEAVRLAVNGQPFE 256
Query: 179 VVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFS 235
V+YY PR S +F + + A ++ GMR+KM FE EDS F GT+ V+
Sbjct: 257 VIYY-PRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVAD 315
Query: 236 P-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
P W DS WR L+V WDEP + RVSPW +E
Sbjct: 316 PVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 349
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
KV M+ VGR LDL+ L YD L +L +MF I+ + + ++Y D G + +G
Sbjct: 494 CKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRNHVLYRDATGAVKHIG 550
Query: 560 DDPWHEFCNMVKRIFI 575
D+P+ +F KR+ I
Sbjct: 551 DEPFSDFTKTAKRLTI 566
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 174/330 (52%), Gaps = 42/330 (12%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + GG
Sbjct: 71 LADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGGG 129
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 130 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 189
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA---------- 166
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 190 QKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGKM 249
Query: 167 ---------------------TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
AS A + Q VVYY PR S +F++ A+ N+
Sbjct: 250 MKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRNQ 308
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 261
+ GMR+KM FE EDS F GT+ + P W +S WR L+V WDEP +
Sbjct: 309 WCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWDEPDLLQNVKC 368
Query: 262 VSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
V+PW +E V+S P + P K+ R+
Sbjct: 369 VNPWLVE-IVSSIPPIHLGPFSPPRKKLRV 397
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
KV ++ VGR +DL+ Y+ L +L +MF I+ + Y D G + G
Sbjct: 592 CKVFVESEDVGRTIDLSVFGSYEELYGQLADMFGIE---KAEVMSHLCYRDAAGAVKRTG 648
Query: 560 DDPWHEFCNMVKRIFICSSQDVKKMSP 586
D+P+ +F + +R+ I S + + P
Sbjct: 649 DEPFCDFMKVARRLTIVESTEGRLQKP 675
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 272/643 (42%), Gaps = 100/643 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGFS
Sbjct: 77 LADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGFS 136
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K
Sbjct: 137 VPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHK 196
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI----------------------- 155
+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 197 KLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRED 256
Query: 156 ------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
S+ M+ +G V A A Q +++Y PR S +F +
Sbjct: 257 DNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PRASTPEFCVKAA 315
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDE
Sbjct: 316 LVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVTWDE 375
Query: 253 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 312
P + RVSPW +E V+S +P + P K+ R D P P +
Sbjct: 376 PDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVPSFS 431
Query: 313 AQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR-------- 364
+ H D H H S + +S+ QS G + R
Sbjct: 432 SYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPAAGS 490
Query: 365 VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFG 424
+ S + E ++N+S + HST K + V+T + LFG
Sbjct: 491 TRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKK------FDGVKTPQLI-------LFG 536
Query: 425 IELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV--QVS 482
++ S VS + T + SDG D + + Q
Sbjct: 537 RPILTELQMSQSFSGDTVSPVGT---------GNSSSDGNGDKMTNLSDGSGSALHQQGL 587
Query: 483 PKESQS------KQSCL----TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
P+ S K +C + KV M+ VGR LDL++L Y+ L +L MF
Sbjct: 588 PEGSAGENFQWYKDNCQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMF 647
Query: 533 DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
I ++ T ++Y D G + VGD+ + +F +R+ I
Sbjct: 648 GID---NSETLNHVLYRDVSGAVKHVGDEQFSDFIKTARRLTI 687
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 176/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + RVSPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 595 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 652
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 653 EPFSDFMRATKRLTIKMDISGDNVRK 678
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 176/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + RVSPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 176/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + RVSPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 176/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + RVSPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 176/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + RVSPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 596 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 653
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 654 EPFSDFMRATKRLTIKMDISGDNVRK 679
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 187/620 (30%), Positives = 269/620 (43%), Gaps = 103/620 (16%)
Query: 1 MAEQETDEVYAQITLLP---------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDT 51
MA+ E+DEV+A++ L+P E E D +S K SF+K LT SD
Sbjct: 74 MADAESDEVFAKLRLIPLKDDEYVDHEYGDGE----DSNGFESNSEKTPSFAKTLTQSDA 129
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGW 189
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR----------------QQSSMPSSVI 155
S FV K+LVAGD+ VF+R ENG+L VG+R R S SS++
Sbjct: 190 SNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLL 249
Query: 156 ---SSQSMHL---------------GVLATASHAVATQTMFVVYY-KPRTSQFIISLNKY 196
S S+ V+ A+ A++ + VVYY + TS+F +
Sbjct: 250 REDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDA 309
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSA 303
+ RV+PW +E V++ V P+ L PR M +P + +PS
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF 423
Query: 304 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSP 363
S P S L + V + R + H + SD + +++R P
Sbjct: 424 PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL--HHYYLNRPPP----PPPP 477
Query: 364 RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLF 423
D KN + + +TP NDT ++ + LF
Sbjct: 478 SSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPC-----NDTKSKK----------SHIVLF 522
Query: 424 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 483
G ++ P E++ T +I T ++ S+ +EF + SP
Sbjct: 523 GKLIL-------PEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEG----SP 571
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
S+ KV M+ VGR LDL+ L Y+ L +L +MF IK +
Sbjct: 572 C-SKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEML 627
Query: 544 WEIVYTDDEGDMMLVGDDPW 563
++Y D G + G++P+
Sbjct: 628 SSVLYRDASGAIKYAGNEPF 647
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 177/345 (51%), Gaps = 51/345 (14%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSP--RPKVHSFSKVLTASDTSTH 54
+A+ +TDEV+A+I L+P E EP P +D P R K+ SF+K LT SD +
Sbjct: 95 LADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFAKTLTQSDANNG 154
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 155 GGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 214
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVR-----------CLA------------------- 144
V K+LVAGD+ VFLR E+GEL VG+R C++
Sbjct: 215 VNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYGGFSAFLKDEEN 274
Query: 145 RQQSSMPSSVISSQS-MHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
+ + P+ + + + + + A+ A F V Y PR S +F++ A+
Sbjct: 275 KMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAMR 334
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 259
+ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 335 IHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLLQVTWDEPDLLQNV 394
Query: 260 DRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 299
VSPW +E V+S P + P PR + VP PLD
Sbjct: 395 KCVSPWLVE-LVSSIPPIHLGPF----SPPRKKLRVPQHPDFPLD 434
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 18/160 (11%)
Query: 422 LFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISAAADSDGK-SDIAKEFKEKKQEQ 478
LFG ++ TSS E + + I + + A SDG S I F + E
Sbjct: 548 LFGKAILTEQQMTSSGSRETLSSGATGNSSPISAALKAGNTSDGSGSSICIGFSSQGHEA 607
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
S L KV M+ VGR +DL+ YD L L +MF I +
Sbjct: 608 ------------SDLGLEAGHCKVFMESEDVGRTIDLSVFGSYDELYGRLADMFGIDKEE 655
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSS 578
T + Y D G +M G P+ +F + +R+ I S
Sbjct: 656 ITS---HLRYRDTAGAVMHTGGLPFSDFMKVARRLTITSG 692
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 156/278 (56%), Gaps = 54/278 (19%)
Query: 2 AEQETDEVYAQITLLPEPSQN-----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
AE TDEV+AQITLLPE Q+ E P P + + SFSK LT+SDTSTHGG
Sbjct: 109 AEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPR---KADLRSFSKKLTSSDTSTHGG 165
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSVL++HA ECLPP+DM+ P Q LVAKD+HG
Sbjct: 166 FSVLKRHAEECLPPMDMSGEPPEQMLVAKDMHG--------------------------- 198
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
ENGEL +G+R + S+ +SVIS+ SM G+L+ A HA+ T +
Sbjct: 199 ---------------ENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFHAITTGS 243
Query: 177 MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
+F VYY+P T ++FII ++Y+E+ +++VG + M FE E+ E+R GT+VG ED
Sbjct: 244 IFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAEQRSEGTIVGNEDV 303
Query: 235 S-PHWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPF 270
W +S+WRSLK +WD + PDRVSPW I P
Sbjct: 304 DHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPI 341
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 486 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL-HTRTKW 544
SQ K C +N S TKV G A GR++D+T GYD LI EL++MFD KG L + W
Sbjct: 539 SQCKNCCSFTNLSCTKVLKHGSA-GRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGW 597
Query: 545 EIVYTDDEGDMML 557
E+ Y DDEGD+ML
Sbjct: 598 EVTY-DDEGDIML 609
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/322 (38%), Positives = 165/322 (51%), Gaps = 31/322 (9%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
MA+ +TDEV+A I L+P + D K SF+K LT SD + GGFSV
Sbjct: 82 MADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPASFAKTLTQSDANNGGGFSVP 141
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWS FV K+L
Sbjct: 142 RYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLTTGWSAFVNHKKL 201
Query: 121 VAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPS----SVISSQSMHLGV------- 164
VAGD+ VFLRG+ G+LHVG+R R ++ S+P + + M G
Sbjct: 202 VAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYTMGPMRGGGNVSPSCK 261
Query: 165 -----------LATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYK 211
+A A+ + F V Y PR S +F + A+ ++ GMR+K
Sbjct: 262 GGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFK 321
Query: 212 MRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
M FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW +E
Sbjct: 322 MAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVEL 381
Query: 270 FVASATPNLVQPVLAKNKRPRL 291
+ +L K+PR+
Sbjct: 382 VSSMPAIHLASSFSPPRKKPRI 403
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 194/661 (29%), Positives = 275/661 (41%), Gaps = 119/661 (18%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEP---------TTPDPCPADSPRPKVHSFSKVLTASDT 51
MA+ +TDEV+A+I L P NEP + K SF+K LT SD
Sbjct: 79 MADPDTDEVFAKIRLAPV-RPNEPGYAADADDAIGAAAAGGGAQEDKPASFAKTLTQSDA 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 138 NNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP-------------------- 151
STFV K+LVAGD+ VF+R ENG+L VG+R + P
Sbjct: 198 STFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPPGGGGYAGF 257
Query: 152 -----------SSVISSQSMHLG-----------VLATASHAVATQTMFVVYYKPRTS-- 187
S ++++ + G V+ A+ AV+ Q VVYY PR S
Sbjct: 258 SMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVYY-PRASTP 316
Query: 188 QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRS 245
+F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR
Sbjct: 317 EFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRL 376
Query: 246 LKVQWDEPASITRPDRVSPWEIE-----PFVASATPNLVQP--VLAKNKRPRLSMEVPPL 298
L+V WDEP + RVSPW +E P + TP P L P L +E
Sbjct: 377 LQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPPRKKLCVPLYPELPLEGHQF 436
Query: 299 DLPSAASAPWSARLA-------------QSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS 345
P +P + Q Q ++ D +D + H
Sbjct: 437 PAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLDKLQSSLSPHG---- 492
Query: 346 NSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLL 405
+ Q DG + PR+ + A + +IS +TP KP++D
Sbjct: 493 ----LHHHQLDGHGV-QPRIAAGLIIGHPAAARD-DISCLLTIG--TTPQNRKPSSD--- 541
Query: 406 EQVETGRKTETGTSCRLFG--------IELINHATSSAPSEKVPVSSLTTEGHIISTISA 457
+ LFG I L N A AP +K P + T+S
Sbjct: 542 ----VKKAAAAAPQLMLFGKPILTEQQISLGNVAGFPAP-KKSPSDDVAER-----TVS- 590
Query: 458 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 517
+SD S + + S ++++ L + + +Q + V GR LDL+
Sbjct: 591 --NSDVSSPGSNHGGSSRSSGGAPSCQDNKVPDLGLETGHCKVFMQSEDV--GRTLDLSA 646
Query: 518 LVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDD-EGDMMLVGDDPWHEFCNMVKRIFIC 576
+ Y+ L L +MF I T + Y DD G + GD P+ EF +R+ I
Sbjct: 647 VGSYEELYQRLADMFGID---KTELMSHVFYRDDASGALKHTGDKPFSEFTKTARRLTIL 703
Query: 577 S 577
+
Sbjct: 704 T 704
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 167/311 (53%), Gaps = 69/311 (22%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPK--VHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+TL P S+ + P P + K F K LTASDTSTHGGFSV
Sbjct: 102 ADKDTDEVYAQMTLQPVNSETD-VFPIPTLGAYTKSKHPTEYFCKNLTASDTSTHGGFSV 160
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A + P LD + P QEL+ +DLH W F+HI+RGQP+RHLLTTGWS FV +KR
Sbjct: 161 PRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKR 220
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFV 179
L AGD+ +F+R + PS V+ A + AT
Sbjct: 221 LKAGDSVLFIR------------------TSPSPF---------VIPVARYNKAT----- 248
Query: 180 VYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HW 238
Y +P +VGMR+ M FE E+S +RR++GTVVG+ D+ P W
Sbjct: 249 -YMQP--------------------SVGMRFAMMFETEESSKRRYTGTVVGISDYDPMRW 287
Query: 239 KDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP--NLVQPVLAKNKR----PRLS 292
+SKWR+L+V+WDE RP+RVS W+IE TP LV P N + P
Sbjct: 288 PNSKWRNLQVEWDEHGYGERPERVSIWDIE------TPENTLVFPSSTLNSKRQCLPGYG 341
Query: 293 MEVPPLDLPSA 303
+ VP L++ SA
Sbjct: 342 VSVPGLEIGSA 352
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ QG +VGR++D+T Y L + MF ++G+L ++W++VY D E D
Sbjct: 797 RTYTKVQKQG-SVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEND 855
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
++LVGDDPW EF N V+ I I S +V++M G +L
Sbjct: 856 VLLVGDDPWEEFINCVRCIRILSPSEVQQMRVGMQL 891
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 175/357 (49%), Gaps = 64/357 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR------------QQSSMPS--------SV 154
V K+L+AGD+ VFLR E G+L VG+R R + P +
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFLRDDEI 244
Query: 155 ISSQSMHLGVLATASHAVAT------------------------QTMFVVYYKPRTS--Q 188
+S+ M + AT A Q VVYY PR S +
Sbjct: 245 TTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPE 303
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSL 246
F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L
Sbjct: 304 FCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 363
Query: 247 KVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
+V WDEP + R SPW +E + S P + + P PR + +P P D P
Sbjct: 364 QVAWDEPDLLQNVKRASPWLVE--LVSNMPAIHLSPF-----SPRKKLRIPQPFDFP 413
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 597 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 654
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 655 EPFSDFMRATKRLTIKMDISGDNVRK 680
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 171/326 (52%), Gaps = 46/326 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ ETDEV+A++ L PE + P+ P K SF+K LT SD + GGFSV
Sbjct: 71 LADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPASFAKTLTQSDANNGGGFSVP 130
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A PPLD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 131 RYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWSTFVNQKKL 190
Query: 121 VAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHLGVLATASHA----- 171
VAGD VFLR +GEL VGVR R SS S+S G T+S A
Sbjct: 191 VAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGSQGASTTSSFARNRAR 250
Query: 172 VATQTM------------FVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
V +++ F V Y PR T++F + +A+++ + GMR+KM FE E
Sbjct: 251 VTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYAGMRFKMAFETE 310
Query: 218 DSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
DS F GT+ V+ P W +S WR V WDEP + RVSPW++E VA+
Sbjct: 311 DSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSPWQVE-LVAT-- 364
Query: 276 PNLVQPVLAKNKRPRLSMEVPPLDLP 301
L M++PP P
Sbjct: 365 ---------------LPMQLPPFSYP 375
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 552
L+ KV +G VGR LDL Y+ + D L MF + K +VY D E
Sbjct: 514 LSIGTEHCKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPA---ASFKNRVVYQDGE 570
Query: 553 GDMMLVGDDPWHEFCNMVKRIFI 575
G + VG +P+ F V+R+ I
Sbjct: 571 GCTLPVGAEPYGNFVAAVRRLTI 593
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 184/622 (29%), Positives = 268/622 (43%), Gaps = 86/622 (13%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCP--ADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ +TDEV+A++ L+P D S + K SF+K LT SD + GGFS
Sbjct: 77 LADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTSFAKTLTQSDANNGGGFS 136
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K
Sbjct: 137 VPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHK 196
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI----------------------- 155
+LVAGD+ VFLR ENG+L VG+R R P S
Sbjct: 197 KLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGAFSAFLRED 256
Query: 156 ------SSQSMH-----LG--------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
S+ M+ +G V A A Q +++Y PR S +F +
Sbjct: 257 DNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFY-PRASTPEFCVKAA 315
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDE
Sbjct: 316 LVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWRLLQVTWDE 375
Query: 253 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARL 312
P + RVSPW +E V+S +P + P K+ R D P P +
Sbjct: 376 PDLLQNVKRVSPWLVE-LVSSMSPIHLAPFSPPRKKFRYPQHP---DFPLDNQPPVPSFS 431
Query: 313 AQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPR-------- 364
+ H D H H S + +S+ QS G + R
Sbjct: 432 SYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHVSKLQS-GLFSIGYRSLDPAAGS 490
Query: 365 VKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRK--TETGTSCRL 422
+ S + E ++N+S + HST K + + + GR TE S
Sbjct: 491 TRLSGNVMTEKPSMSENVSCLLTMA-HSTQASKKFDGVKTPQLILFGRPILTELQMSQSF 549
Query: 423 FG--IELINHATSSAPSEKVPVSSLT-TEGHIISTISAAADSDGKSDIAKEFKEKKQEQV 479
G + + SS+ +++L+ G + S G++ F+ K +
Sbjct: 550 SGDTVSPVGTGNSSSDGNGDKMTNLSDGSGSALHQQGLPEGSAGEN-----FQWYKDNRQ 604
Query: 480 QVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH 539
++ P + KV M+ VGR LDL++L Y+ L +L MF I +
Sbjct: 605 EIDP----------NLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGID---N 651
Query: 540 TRTKWEIVYTDDEGDMMLVGDD 561
+ T ++Y D G + VGD+
Sbjct: 652 SETLNHVLYRDVSGAVKHVGDE 673
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 268/614 (43%), Gaps = 86/614 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH---SFSKVLTASDTSTHGGF 57
+A+ ETDEVYA+I L+P P+ EP + V SF+K LT SD + GGF
Sbjct: 68 LADAETDEVYAKIMLVPLPN-TEPDLENDAVFGGGSDNVEKPASFAKTLTQSDANNGGGF 126
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R A P LD P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 127 SVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVNH 186
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV------ISSQSMHLGVLATASHA 171
K+LVAGD+ VFLR ENGEL VG+R R + S +S G L
Sbjct: 187 KKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSGFLKEDESK 246
Query: 172 VA-------------------------TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKF 204
+ Q +VYY PR S +F + + A+ +
Sbjct: 247 ITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYY-PRASTPEFCVKASAVRAAMRVPW 305
Query: 205 AVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRV 262
MR+KM FE ED F GTV V P W +S WR L+V WDEP + +RV
Sbjct: 306 CSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEPDLLQNVERV 365
Query: 263 SPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAAS---APWSARLAQSHN- 317
SPW +E V + P + P PR + +P LD P P+S +S N
Sbjct: 366 SPWLVE-LVPNMLPVHLSPF--STVTPRKKLRLPKHLDFPLVEQFPMPPFSGHPLRSSNP 422
Query: 318 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQS----DGEWLTSPRVKFSQQL-F 372
L LS D H SS+ +++ +S G L P+ + +
Sbjct: 423 LRCLS----DNAPAGIQGARHAQFRLSSSDPHLNKLKSGLFPSGFQLFDPQARVPNGISM 478
Query: 373 QEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELINHAT 432
+ D N + + G+S+P ++ E G++ + LFG ++
Sbjct: 479 TKHTDSNDDNLSCLLTVGNSSPK----------KKSENGKRHQF----LLFGQPILTEQQ 524
Query: 433 SSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIA--KEFKEKKQ-EQVQVSPKESQSK 489
S ++L E S ++S ++ ++ K F + +Q +P+ +
Sbjct: 525 LSRSCSTGVKTALENEDK-RKDYSNGSESALENQLSPEKSFTTRLLWQQDYQAPEPGSAT 583
Query: 490 QSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYT 549
C KV ++ VGR LDLT L Y+ L L MF G+ + ++Y
Sbjct: 584 GHC--------KVFLESEDVGRTLDLTVLGSYEELYMRLANMF---GRERSEMLGHVLYR 632
Query: 550 DDEGDMMLVGDDPW 563
D G + GD+P+
Sbjct: 633 DATGAVKQTGDEPF 646
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 166/322 (51%), Gaps = 33/322 (10%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
MA+ +TDEV+A+I L+P +++ D A K SF+K LT SD + GGFSV
Sbjct: 78 MADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSV 137
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD P Q +VAKD+HG W F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 138 PRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKK 197
Query: 120 LVAGDTFVFLRGENGELHVGVR------C-------------------LARQQSSMPSSV 154
LVAGD+ VFLRG+ G+LHVG+R C L R +S ++
Sbjct: 198 LVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAA 257
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKM 212
+ L A+ F V Y PR S +F + A+ ++ GMR+KM
Sbjct: 258 KGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKM 317
Query: 213 RFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
FE EDS F GTV V+ P W S WR L+V WDEP + RVSPW +E
Sbjct: 318 AFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVE-- 375
Query: 271 VASATPNL-VQPVLAKNKRPRL 291
+ S+ P + + K+PR+
Sbjct: 376 LVSSMPAINLSSFSPPRKKPRI 397
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 189/389 (48%), Gaps = 56/389 (14%)
Query: 1 MAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 54
MA+ E+DEV+A++ L+P E E + + K SF+K LT SD +
Sbjct: 74 MADPESDEVFAKLKLIPLKDNDHEYRDGEESN---GLGSNNSEKTPSFAKTLTQSDANNG 130
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 131 GGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSNF 190
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQS 148
V K+LVAGD+ VF+R ENG+L VG+R L R
Sbjct: 191 VNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSLLRDDE 250
Query: 149 SMPSSVISSQSMHL---GVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNK 203
SS ++ + + V+ A AV+ + VVYY PR +S+F + A+
Sbjct: 251 RRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYY-PRASSSEFCVKALDARAAMRIP 309
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDR 261
+ GMR+KM FE EDS F GTV V P W +S WR L+V WDEP + R
Sbjct: 310 WCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPDLLQYVKR 369
Query: 262 VSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAPWSARLAQ 314
V+PW +E V++ V P++ PR M +P + +PS AS P
Sbjct: 370 VNPWLVE-LVSN-----VHPIIPSFSPPRKKMRLPQHPDYNTRISVPSFASNPLIRSSPL 423
Query: 315 SHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
S L + V + R + H + SD
Sbjct: 424 SSVLDNVPVGLQGARHNAHQYYGLSSSDL 452
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 178/360 (49%), Gaps = 69/360 (19%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLTASDT 51
+A+ ETDEV+++ITLLP P + D +P P K SF+K LT SD
Sbjct: 65 LADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAKTLTQSDA 124
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 125 NNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGW 184
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL--------- 162
STFV K+L+AGD+ VFLR E+G+L VG+R R + S+ + S + ++
Sbjct: 185 STFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVGSDNNNIPYPGFSGFL 242
Query: 163 ----------------GVLATASHAVA-------------------TQTMFVVYYKPRTS 187
G ++A A Q VVYY PR S
Sbjct: 243 RDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVVYY-PRAS 301
Query: 188 --QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 243
+F + + A+ ++ GMR+KM FE EDS F GTV V+ P W +S W
Sbjct: 302 TPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 361
Query: 244 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
R L+V WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 362 RLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKLRIPQPFEFP 414
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 593 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEERSDLLT--HVVYRDANGVIKRIGD 650
Query: 561 DPWHEFCNMVKRIFI 575
+P+ +F KR+ I
Sbjct: 651 EPFSDFMRATKRLTI 665
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 163/297 (54%), Gaps = 56/297 (18%)
Query: 2 AEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
AE +DEVYAQ+TL+P Q+ E D P+ + ++FSK+LT SDTSTHGGF
Sbjct: 88 AEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSIT---TTYTFSKILTPSDTSTHGGF 144
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV +KHA EC PPLDM Q TP QE+VAKDL+G
Sbjct: 145 SVPKKHADECFPPLDMTQQTPAQEIVAKDLNG---------------------------- 176
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQS--SMPSSVISSQSMHLGVLATASHAVATQ 175
E+GE+ VG+R S S SS+IS SM LG+LA+ASHAV++
Sbjct: 177 -------------AESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGILASASHAVSSG 223
Query: 176 TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVED 233
TMF+VYY P T+ +FI+ L YL++ + +GMR +M+ E E+S RR +GT++G ED
Sbjct: 224 TMFIVYYHPWTNPFEFIVPLRTYLKSTVPDYPIGMRVQMQHEVEES-LRRHAGTIIGHED 282
Query: 234 FSP-HWKDSKWRSLKVQWDEPA-SITRPDRVSPWEIEPFVASATPNLVQPVLAKNKR 288
W S+WR LKVQWD P+RV PW IEP ++ V P L K+
Sbjct: 283 IDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQV-PALPTTKK 338
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 479 VQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL 538
++V+P ++ K+ +NRS TKV G A+GRA+DL GY LI EL+ MF+ +G L
Sbjct: 514 MRVAPGKT-CKKCHRVNNRSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSL 572
Query: 539 -HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
+ + W + DD+GDMM +GD PW +F +V+++ IC + + P S
Sbjct: 573 INESSGWHVTCMDDDGDMMQLGDYPWQDFQGVVQKMIICPKEGTNNIKPSS 623
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 167/323 (51%), Gaps = 35/323 (10%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
MA+ +TDEV+A+I L+P +++ D A K SF+K LT SD + GGFSV
Sbjct: 78 MADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSV 137
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD P Q +VAKD+HG W F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 138 PRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKK 197
Query: 120 LVAGDTFVFLRGENGELHVGVRCLAR------------------QQSSMPSSVISSQSMH 161
LVAGD+ VFLRG+ G+LHVG+R R Q + S +
Sbjct: 198 LVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAA 257
Query: 162 LG--------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYK 211
G V+ A A Q VVYY PR S +F + A+ ++ GMR+K
Sbjct: 258 KGRGKVRAEDVVEAARLASGGQPFEVVYY-PRASTPEFCVRAAAVRAAMRVQWCPGMRFK 316
Query: 212 MRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEP 269
M FE EDS F GTV V+ P W S WR L+V WDEP + RVSPW +E
Sbjct: 317 MAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVE- 375
Query: 270 FVASATPNL-VQPVLAKNKRPRL 291
+ S+ P + + K+PR+
Sbjct: 376 -LVSSMPAIHLSSFSPPRKKPRI 397
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 162/303 (53%), Gaps = 36/303 (11%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ +TDEV+A+I L+P + + D A + K SF+K LT SD + GG
Sbjct: 80 MADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTLTQSDANNGGG 139
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 140 FSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWSTFVN 199
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLGVL------ 165
K+LVAGD+ VFLRG++G+LHVG+R R S + + G++
Sbjct: 200 QKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAGLMRGNVSP 259
Query: 166 ---ATASHAV-------------ATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVG 207
A A V A Q+ VVYY PR S +F + A+ +++ G
Sbjct: 260 CAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVRAAAVRVAMRVQWSPG 318
Query: 208 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 265
MR+KM FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW
Sbjct: 319 MRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPW 378
Query: 266 EIE 268
+E
Sbjct: 379 LVE 381
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 172/345 (49%), Gaps = 54/345 (15%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKVLTASDT 51
+A++++DEVYA+I L P P + E PD CP A P P K SF+K LT SD
Sbjct: 78 LADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDA 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 138 NNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-------- 163
STFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 198 STFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFL 257
Query: 164 ---------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
V+ AS A + Q V YY PR S F++
Sbjct: 258 KEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPDFVVKAA 316
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L+V WDE
Sbjct: 317 SVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDE 376
Query: 253 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
P + VSPW +E V+S P + P PR + VPP
Sbjct: 377 PDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 416
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 178/353 (50%), Gaps = 60/353 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLTASDT 51
+A+ ETDEV+A+ITLLP P + D +P + K SF+K LT SD
Sbjct: 65 LADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDA 124
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 125 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGW 184
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP------------SS 153
STFV K+L+AGD+ VFLR E+G+L VG+R R S P S+
Sbjct: 185 STFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDEST 244
Query: 154 VISSQSMHLGVLATA-SHAVAT------------------QTMFVVYYKPRTS--QFIIS 192
+S+ M + +A AT Q VVYY PR S +F +
Sbjct: 245 TTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPEFCVK 303
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V W
Sbjct: 304 AADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAW 363
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
DEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 364 DEPDLLQNVKRVSPWLVE--LVSNMPTIHLSPF-----SPRKKIRIPQPFEFP 409
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 584 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGVIKRIGD 641
Query: 561 DPWHEFCNMVKRIFI 575
+P+ +F KR+ I
Sbjct: 642 EPFSDFMKATKRLTI 656
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 162/303 (53%), Gaps = 36/303 (11%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ +TDEV+A+I L+P + + D A + K SF+K LT SD + GG
Sbjct: 80 MADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTLTQSDANNGGG 139
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 140 FSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWSTFVN 199
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLGVL------ 165
K+LVAGD+ VFLRG++G+LHVG+R R S + + G++
Sbjct: 200 QKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAGLMRGNVSP 259
Query: 166 ---ATASHAV-------------ATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVG 207
A A V A Q+ VVYY PR S +F + A+ +++ G
Sbjct: 260 CAAAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVRAAAVRVAMRVQWSPG 318
Query: 208 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 265
MR+KM FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW
Sbjct: 319 MRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPW 378
Query: 266 EIE 268
+E
Sbjct: 379 LVE 381
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 172/345 (49%), Gaps = 54/345 (15%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKVLTASDT 51
+A++++DEVYA+I L P P + E PD CP A P P K SF+K LT SD
Sbjct: 140 LADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDA 199
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 200 NNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 259
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-------- 163
STFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 260 STFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFL 319
Query: 164 ---------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
V+ AS A + Q V YY PR S F++
Sbjct: 320 KEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPDFVVKAA 378
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L+V WDE
Sbjct: 379 SVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDE 438
Query: 253 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
P + VSPW +E V+S P + P PR + VPP
Sbjct: 439 PDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 478
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 172/345 (49%), Gaps = 54/345 (15%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKVLTASDT 51
+A++++DEVYA+I L P P + E PD CP A P P K SF+K LT SD
Sbjct: 98 LADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDA 157
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 158 NNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 217
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-------- 163
STFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 218 STFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFL 277
Query: 164 ---------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
V+ AS A + Q V YY PR S F++
Sbjct: 278 KEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPDFVVKAA 336
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L+V WDE
Sbjct: 337 SVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDE 396
Query: 253 PASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
P + VSPW +E V+S P + P PR + VPP
Sbjct: 397 PDLLQNVKCVSPWLVE-LVSSIPPIHLGPF----SSPRKKLRVPP 436
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 162/322 (50%), Gaps = 44/322 (13%)
Query: 1 MAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 73 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 132
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 133 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 192
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG----- 163
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 193 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRN 252
Query: 164 --------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
VL A+ A Q V+YY PR S +F + A+
Sbjct: 253 ATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAMA 311
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 259
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 312 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQNV 371
Query: 260 DRVSPWEIEPFVASATPNLVQP 281
RV PW +E + S+ PNL P
Sbjct: 372 KRVCPWLVE--LVSSMPNLHLP 391
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 547
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 600 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 656
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
Y G++ GD+P+ F +++ I
Sbjct: 657 YRSPAGEVKHAGDEPFCAFVKSARKLRI 684
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 162/322 (50%), Gaps = 44/322 (13%)
Query: 1 MAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 137 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG----- 163
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRN 256
Query: 164 --------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
VL A+ A Q V+YY PR S +F + A+
Sbjct: 257 ATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAMA 315
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 259
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 316 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQNV 375
Query: 260 DRVSPWEIEPFVASATPNLVQP 281
RV PW +E + S+ PNL P
Sbjct: 376 KRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 547
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 168/318 (52%), Gaps = 45/318 (14%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + GG
Sbjct: 74 LADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGGG 132
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 133 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFVN 192
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------- 162
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 193 QKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGKI 252
Query: 163 -----------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
V+ AS A + Q VVYY PR S +F++ A+ N+
Sbjct: 253 TKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRNQ 311
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSLKVQWDEPASITRPD 260
+ GMR+KM FE EDS F GT+ V D + W +S WR L+V WDEP +
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQVSWDEPDLLQNVK 370
Query: 261 RVSPWEIEPFVASATPNL 278
V+PW +E + S+ P +
Sbjct: 371 CVNPWLVE--IVSSIPPI 386
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 489 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVY 548
K S L KV M+ VGR +DL+ Y+ L +L +MF I+ R + Y
Sbjct: 541 KASELGLEDGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIEKAEIMR---HLCY 597
Query: 549 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
D G + G++P+++F + +R+ I + + P
Sbjct: 598 RDAAGAVRHTGEEPFNDFMKVARRLTIIEGTEGRPQKP 635
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 165/315 (52%), Gaps = 48/315 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
MA+ ETDEVYA++ L+P + + D A++ R K SF+K LT SD + GGFSV
Sbjct: 77 MADPETDEVYAKLKLVPLNANDVDYDHDVIGAET-RDKPASFAKTLTQSDANNGGGFSVP 135
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 136 RYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKL 195
Query: 121 VAGDTFVFLRGENGELHVGVRCL----------------ARQQSSMPSSVIS-------- 156
VAGD+ VFLR ENG+L VG+R A MP S S
Sbjct: 196 VAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGFSPFLREDDN 255
Query: 157 -------SQSMHLGV------------LATASHAVATQTMFVVYYKPRTS--QFIISLNK 195
S ++ V + A++ A + F V Y PR S +F + +
Sbjct: 256 RILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRASTPEFCVKASL 315
Query: 196 YLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEP 253
A+ ++ G+R+KM FE EDS F GT+ V+ P +W +S WR L+V WDEP
Sbjct: 316 VEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPWRLLQVTWDEP 375
Query: 254 ASITRPDRVSPWEIE 268
+ RVSPW +E
Sbjct: 376 DLLQNVRRVSPWLVE 390
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 558
KV M+ VGR +DL+ L YD L +L +MF I K ++ +R ++Y D G + +
Sbjct: 564 CKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR----VLYCDSVGAIKHI 619
Query: 559 GDDPWHEFCNMVKRIFI 575
GD+P+ +F KR+ I
Sbjct: 620 GDEPFSDFTRTAKRLTI 636
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 173/349 (49%), Gaps = 57/349 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR--PKVHSFSKVLTASDTSTHGGFS 58
+A+ ETDEV+++ITL+P +N D D K SF+K LT SD + GGFS
Sbjct: 123 LADSETDEVFSKITLIP--LRNSELENDDSDGDGSENSEKPASFAKTLTQSDANNGGGFS 180
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV K
Sbjct: 181 VPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQK 240
Query: 119 RLVAGDTFVFLRGENGELHVGVR---------------------------------CLAR 145
+LVAGD+ VFLR E+GEL VG+R R
Sbjct: 241 KLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGAFTAFLR 300
Query: 146 QQSSMPSSVISSQSMHLGVLATASH-----AVATQTMFVVYYKPRTS--QFIISLNKYLE 198
+++ + + + V + A + QT VVYY PR S +F I +
Sbjct: 301 EENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYY-PRASTPEFCIKTSAVKA 359
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASI 256
A+ ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 360 AMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTWDEPDLL 419
Query: 257 TRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLDL 300
RVSPW +E N+ LA PR + P PLD+
Sbjct: 420 HNVKRVSPWLVE-----LVSNMSMIHLAPFSPPRKKLRFPQHPDFPLDV 463
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 464 KSDIAKEFKEKKQEQVQVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
+S I+++F K S S S C L + KV ++ VGR LDL+ + Y
Sbjct: 614 QSSISEQFSPAK------SSTTSASADFCWQLGLDTGHCKVFLESEDVGRTLDLSCVGSY 667
Query: 522 DHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC---S 577
+ L +L +MF I + ++ +R ++Y D G + G++P+ +F KR+ I
Sbjct: 668 EELYRKLAKMFGIERSEMLSR----VLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSG 723
Query: 578 SQDVKKM 584
S+D +++
Sbjct: 724 SKDTRRV 730
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 159/303 (52%), Gaps = 39/303 (12%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ ETDEV+A++ L+P S+ + D K SF+K LT SD + GGFSV
Sbjct: 68 LADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPASFAKTLTQSDANNGGGFSV 127
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTTGWS+FV K+
Sbjct: 128 PRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKK 187
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPS--------------------------- 152
LVAGD+ VFLR ENG+L VG+R R P
Sbjct: 188 LVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPYGAFSGFMRE 247
Query: 153 ----SVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVG 207
+ +S +S+ V AS+ Q VVYY + T +F I + A+ ++ G
Sbjct: 248 ESGRAKVSGESVREAVTLAASN----QAFEVVYYPRANTPEFCIRTSAVRGAMRIQWCSG 303
Query: 208 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 265
MR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP + RVSPW
Sbjct: 304 MRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHNVKRVSPW 363
Query: 266 EIE 268
+E
Sbjct: 364 LVE 366
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 552
L S+ S KV M+ VGR LDL+ L Y L L MF I+ + ++Y D
Sbjct: 553 LGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE---RSDMLSHVLYCDSS 609
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
G + +G++P+ EF KR+ I + + K
Sbjct: 610 GALKQIGEEPFSEFMKTAKRLTILTDSNNK 639
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 171/335 (51%), Gaps = 48/335 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS----PRPKVHSFSKVLTASDTSTHGG 56
MA+ ETDEVY ++ L P +NE + C + + K SF+K LT SD + GG
Sbjct: 74 MADPETDEVYVKMKLTPL-RENELDFEEDCFFGNNGLESQEKPASFAKTLTQSDANNGGG 132
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV
Sbjct: 133 FSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWSNFVN 192
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHLG------ 163
K+LVAGD+ VFLR ENG+L VG+R + Q S SS + S G
Sbjct: 193 HKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLFGGVGSGF 252
Query: 164 ----------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEA 199
V+ + AV ++ VVYY PR S +F + ++ A
Sbjct: 253 LCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYY-PRASTPEFCVKVSSVKSA 311
Query: 200 VNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASIT 257
+ ++ GMR+KM FE EDS F GT+ V P W DS WR L+V WDEP +
Sbjct: 312 MQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVWDEPDLLQ 371
Query: 258 RPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 291
V+PW +E + S PN + P K+PR
Sbjct: 372 NVKCVNPWLVE--LVSNMPNFNLSPFTPPRKKPRF 404
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 173/354 (48%), Gaps = 61/354 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQN-----------EPTTPDPCPADSPRPKVHSFSKVLTAS 49
+A+ ETDEV+A+ITLLP P + P + D + K SF+K LT S
Sbjct: 65 LADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASFAKTLTQS 124
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 184
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS----------------- 152
GWSTFV K+L+AGD+ VFLR E+G+L VG+R R
Sbjct: 185 GWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPGFSGFLRDD 244
Query: 153 -SVISSQSMHLGVLATASHAVA------------------TQTMFVVYYKPRTS--QFII 191
+ +S+ M + +A A Q VVYY PR S +F +
Sbjct: 245 ETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYY-PRASTPEFCV 303
Query: 192 SLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V
Sbjct: 304 KAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVA 363
Query: 250 WDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVP-PLDLP 301
WDEP + RVSPW +E + S P + + P PR + +P P + P
Sbjct: 364 WDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKKIRIPQPFEFP 410
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G + +GD
Sbjct: 589 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLT--HVVYRDANGAIKRIGD 646
Query: 561 DPWHEFCNMVKRIFI 575
+P+ +F KR+ I
Sbjct: 647 EPFSDFMKSTKRLTI 661
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 128/161 (79%), Gaps = 9/161 (5%)
Query: 141 RCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 198
R RQ S++PSSVISS SMHLGVLATA HA+ T++MF VYYKPRTS +FII ++Y+E
Sbjct: 38 RRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYME 97
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITR 258
+V N +++GMR++MRFEGE++PE+RF+GT+VG E+ W +S WRSLKV+WDEP++I R
Sbjct: 98 SVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPR 157
Query: 259 PDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVPPL 298
PDRVSPW+IEP AS+ P V P+ L++ KRPR + VPP+
Sbjct: 158 PDRVSPWKIEP--ASSPP--VNPLPLSRVKRPRPN--VPPV 192
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSD---GKSDIAK 469
K G+ ++FG ++ T+SAPS + + ++ T ++A+ + D
Sbjct: 401 KAREGSGFKIFGFKV---DTTSAPSNHLSSTMAVIHEPVLQTQASASLTQLQHAHIDCIP 457
Query: 470 EF---------KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
E EK +Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 458 ELSVSTAGTTENEKSIQQAPNSSKDVQSK-SHGASTRSCTKVHKQGVALGRSVDLSKFGD 516
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
YD L EL+ MF+ G+L + + W+IVYTD EGDMMLVGDDPW EFC++V++IFI + +
Sbjct: 517 YDELTAELDRMFEFGGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSIVRKIFIYTKE 576
Query: 580 DVKKMSPGSKLP 591
+V+KM+ S P
Sbjct: 577 EVQKMNSKSSTP 588
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 167/345 (48%), Gaps = 57/345 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 57
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 87 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 146
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 147 SCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 206
Query: 118 KRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPSS 153
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 207 KKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPSF 266
Query: 154 -----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TSQ 188
+IS M G V+ Q VVYY PR T +
Sbjct: 267 SGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PRSGTPE 325
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLK 247
F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR L+
Sbjct: 326 FFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLLE 385
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 291
V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 386 VTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 158/316 (50%), Gaps = 49/316 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---KVHSFSKVLTASDTSTHGGF 57
+A+ ETDEVYA+I L+P NEP D S K SF+K LT SD + GGF
Sbjct: 68 LADVETDEVYAKIRLVPV-GNNEPEFEDAVLGSSASETAEKPTSFAKTLTQSDANNGGGF 126
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 127 SVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQ 186
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQS---SMPSSVISSQSMHLGVLAT------- 167
K+LVAGD+ VFLR +NG+L VG+R R + PS + G +
Sbjct: 187 KKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGGFSAYLREDEN 246
Query: 168 -------------------------------ASHAVATQTMFVVYYKPR--TSQFIISLN 194
A++ AT F V Y PR T +F + +
Sbjct: 247 RIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPRANTPEFCVRAS 306
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 252
A+ ++ G+R+KM FE EDS F GT+ V+ P HW +S WR L+V WDE
Sbjct: 307 SVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPNSPWRLLQVTWDE 366
Query: 253 PASITRPDRVSPWEIE 268
P + VSPW +E
Sbjct: 367 PDLLQNVKHVSPWLVE 382
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/314 (38%), Positives = 163/314 (51%), Gaps = 46/314 (14%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHG 55
MA+ ETD+V+A+++L+P S+ P + D+ P K SF+K LT SD + G
Sbjct: 63 MADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLTQSDANNGG 122
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+FV
Sbjct: 123 GFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSFV 182
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVR------------------------------CLAR 145
K+LVAGD+ VFLR ENG+L VG+R +
Sbjct: 183 NQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIGPFSFFLK 242
Query: 146 QQSSM---PSSVISSQSMHLGVLA----TASHAVATQTMFVVYYKPRTS--QFIISLNKY 196
+++ M V + S + V A A A+ F V Y PR S +F + +
Sbjct: 243 EENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPEFCVKASSV 302
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR L+V WDEP
Sbjct: 303 GAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQVTWDEPD 362
Query: 255 SITRPDRVSPWEIE 268
+ RVSPW +E
Sbjct: 363 LLQNVKRVSPWLVE 376
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 480 QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
Q SP ++ S + L + KV ++ VGR LDL+ Y+ L L MF I+
Sbjct: 566 QFSPGKASSAEFFWQLGLDTGHCKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-- 623
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
+ ++Y D G + G++P+ +F KR+ I + K +
Sbjct: 624 -RSEILNHVLYYDAAGAVKQTGEEPFSDFMKTAKRLTILTDSGSKNI 669
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 169/331 (51%), Gaps = 42/331 (12%)
Query: 1 MAEQETDEVYAQITLLPEPSQNE--PTTPDPCP-----ADSPRPKVHSFSKVLTASDTST 53
+A+ ETDEVYA+I L+P ++ + D C + K SF+K LT SD +
Sbjct: 80 LADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQEKPASFAKTLTQSDANN 139
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 140 GGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSN 199
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---QQSSMPSSVISSQSMHLG------- 163
FV K+LVAGD+ VFLR +NG+L VG+R R + PS S G
Sbjct: 200 FVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSFGGYAAGFLREDES 259
Query: 164 -------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNN 202
V+ A+ A Q +VYY PR S +F + + A+
Sbjct: 260 KLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYY-PRASTPEFCVRASAVRAAMQI 318
Query: 203 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPD 260
++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP +
Sbjct: 319 QWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLQNVK 378
Query: 261 RVSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
RVSPW +E VA+ + P K+ R+
Sbjct: 379 RVSPWLVE-LVANMPAVHLSPFSPPRKKLRI 408
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 482 SPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR 541
SP + ++ L KV M+ VGR LDL+ L Y+ L +L MF+I+ ++
Sbjct: 489 SPSYKEHWKTDLGLETGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIE---NSD 545
Query: 542 TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
++Y D G + GD+P+ EF +R+ I
Sbjct: 546 MLSSVLYRDAAGAIKRTGDEPFSEFLKTARRLTI 579
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 167/345 (48%), Gaps = 57/345 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 57
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 87 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 146
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S R A P LD + + P Q++ KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 147 SCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 206
Query: 118 KRLVAGDTFVFLRGENGELHVGVR------------------------CLARQQSSMPSS 153
K+L +GD+ VFLR ENG+LHVG+R C A PS
Sbjct: 207 KKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGSGIGICAAPPYGGFPSF 266
Query: 154 -----------------VISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TSQ 188
+IS M G V+ Q VVYY PR T +
Sbjct: 267 SGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVVYY-PRSGTPE 325
Query: 189 FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLK 247
F + + A+ ++ GMR+KM E EDS F GTV V+ P W DS WR L+
Sbjct: 326 FFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADPSWSDSMWRLLE 385
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRL 291
V WDEP + RV+PW++E + S P++ + P + K+ RL
Sbjct: 386 VTWDEPELLKNVKRVNPWQVE--IVSNMPSIPLSPFIPPRKKLRL 428
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 140/290 (48%), Gaps = 38/290 (13%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 57
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 865 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 924
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S R A P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 925 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 984
Query: 118 KRLVAGDTFVFLRGENGELHVGV--------RCLA-----------------RQQSSMPS 152
K+L +GD+ VFLR ENGEL VG+ C A R+
Sbjct: 985 KKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKGNG 1044
Query: 153 SVISSQSMHLG------VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKF 204
+IS M G V+ Q VVYY PR T +F + + + ++
Sbjct: 1045 LLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYY-PRSGTPEFFVKTSLIGITLQIRW 1103
Query: 205 AVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEP 253
GMR+KM E EDS F GTV V+ P W DS WR L+ + +P
Sbjct: 1104 CPGMRFKMPIETEDSSRISWFIGTVASVQAADPSWPDSLWRLLQPSFQQP 1153
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 173/359 (48%), Gaps = 64/359 (17%)
Query: 1 MAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
+A+ ETDEVYA++ L PE + +E P + P SF+K LT SD
Sbjct: 78 LADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKTLTQSD 133
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 134 ANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTG 193
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV----ISSQSMHLGVLA 166
WSTFV K+LVAGD VFLR +GEL VGVR R + S + QS + +L+
Sbjct: 194 WSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQSGYSELLS 253
Query: 167 TASHAVATQTM------------------------FVVYYKPR--TSQFIISLNKYLEAV 200
+ + F V Y PR T++F + + ++
Sbjct: 254 GNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCVRASVVKASL 313
Query: 201 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 258
+ + GMR+KM FE EDS F GT+ V+ P W S WR L+V WDEP +
Sbjct: 314 EHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQVSWDEPDLLQG 373
Query: 259 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHN 317
+RVSPW++E LV L M++PP LP P + +S
Sbjct: 374 VNRVSPWQVE---------LVS---------TLPMQLPPFSLPRKKIRPLDLQFGESQG 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 692 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 747
Query: 560 DDPWHEFCNMVKRIFICS 577
+P+ F V+R+ I +
Sbjct: 748 GEPYGNFVKSVRRLTILA 765
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 167/324 (51%), Gaps = 35/324 (10%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
MA+ +TDEV+A+I L+P + D A + K SF+K LT SD + GGFS
Sbjct: 80 MADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPASFAKTLTQSDANNGGGFS 139
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV K
Sbjct: 140 VPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPRRHLLTTGWSTFVNQK 199
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISS---------QSMHLGVLATAS 169
+L+AGD+ VFLRG++G+LHVG+R R + G ++ +
Sbjct: 200 KLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGWHHYAGLIRGNVSPCA 259
Query: 170 HAVA------------------TQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMR 209
A A Q+ VVYY PR S +F + A+ +++ GMR
Sbjct: 260 AAKARGKVRPEDVAEAARLAAAGQSFEVVYY-PRASTPEFCVRAAAVRAAMRVQWSPGMR 318
Query: 210 YKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEI 267
+KM FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW +
Sbjct: 319 FKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLV 378
Query: 268 EPFVASATPNLVQPVLAKNKRPRL 291
E V+S + K+PR+
Sbjct: 379 E-LVSSMPAIHLASFSPPRKKPRI 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 557
+ KV ++ VGR LDL+ L +D L L EMF ++G + ++Y G++
Sbjct: 622 GQCKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEG---AEMRSRVLYRGATGEVRH 678
Query: 558 VGDDPWHEFCNMVKRIFICS 577
GD+P+ +F +RI I +
Sbjct: 679 AGDEPFSDFVKSARRITILT 698
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 192/400 (48%), Gaps = 67/400 (16%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNE-PTTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
MA+ E+DEVYA++ L+P E +E D +S K SF+K LT SD + G
Sbjct: 74 MADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDANNGG 133
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R A P LD N P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV
Sbjct: 134 GFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFV 193
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVR-----------------------C---------- 142
K+LVAGD+ VF+R ENG+L VG+R C
Sbjct: 194 NQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSCGYSSLLREDE 253
Query: 143 ---LARQQSSMP--SSVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISLNKY 196
L R S+ ++++S V+ A+ A++ + VVYY + TS+F +
Sbjct: 254 SNSLRRSNCSLADRKGKVTAES----VIEAATLAISGRPFEVVYYPRASTSEFCVKAVDA 309
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ + GMR+KM FE EDS F GTV V P W +S WR L+V WDEP
Sbjct: 310 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPD 369
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPV-LAKNKRPRLSMEVP----------PLDLPSA 303
+ RV+PW +E V++ V P+ L PR M +P + +PS
Sbjct: 370 LLQNVKRVNPWLVE-LVSN-----VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF 423
Query: 304 ASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
S P S L + V + R + H + SD
Sbjct: 424 PSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDL 463
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
KV M+ VGR LDL+ L Y+ L +L +MF IK + ++Y D G + G
Sbjct: 587 CKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIK---KSEMLSSVLYRDASGAIKYAG 643
Query: 560 DDPWHEFCNMVKRIFICSSQ 579
++P+ EF +R+ I + Q
Sbjct: 644 NEPFSEFLKTARRLTILTEQ 663
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 158/320 (49%), Gaps = 52/320 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-----SPRPKVHSFSKVLTASDTSTHG 55
MA ETDEV+A+++LLP + D D S K SF+K LT SD + G
Sbjct: 63 MANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLTQSDANNGG 122
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV R A P LD P Q +VAKD+HG WRF+HI+RG PRRHLLTTGWS+FV
Sbjct: 123 GFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTTGWSSFV 182
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVR----------------------------C----- 142
K+LVAGD+ VFLR ENG+L VG+R C
Sbjct: 183 NQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGNGNCGIGPY 242
Query: 143 ------LARQQSSMPSSVISSQSMHLGVLA----TASHAVATQTMFVVYYKPRTS--QFI 190
L + + + + S + V A A A+ F V Y PR S +F
Sbjct: 243 GPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKPFEVVYYPRASTPEFC 302
Query: 191 ISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKV 248
+ + A+ ++ GMR+KM FE ED+ F GT+ V+ P W +S WR L+V
Sbjct: 303 VKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPIRWPNSPWRLLQV 362
Query: 249 QWDEPASITRPDRVSPWEIE 268
WDEP + RVSPW +E
Sbjct: 363 TWDEPDLLQNVKRVSPWLVE 382
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 461 SDGKSDIAKEFKEKKQEQV--QVSPKESQSKQSC--LTSNRSRTKVQMQGVAVGRALDLT 516
SD K D AK + Q + Q SP ++ S + L + KV ++ VGR LDL+
Sbjct: 550 SDDK-DKAKCLMDDSQSTLSQQFSPGKASSAEFSWQLGLDTGHCKVFLESEDVGRTLDLS 608
Query: 517 TLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
Y+ L L MF I+ + ++Y D G G++P+ +F KR+ I
Sbjct: 609 LFGSYEDLYRRLAIMFGIE---RSEILNHVLYHDAAGAAKKTGEEPFSDFMKTAKRLTIL 665
Query: 577 ---SSQDVKK 583
SS+++K+
Sbjct: 666 TDSSSKNIKR 675
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 154/321 (47%), Gaps = 53/321 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
MA+ ETDEV+A+I L+P S + + H SF+K LT SD +
Sbjct: 77 MADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTLTQSDANNG 136
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 137 GGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLTTGWSPF 196
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV-----------------ISS 157
V K+LVAGD+ VFLR ENG+L VGVR R S P S+ S
Sbjct: 197 VNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVPYGGFGAFSR 256
Query: 158 QSMHLGV--------------------------LATASHAVATQTMFVVYYKPR--TSQF 189
+ H V + A+ A F Y PR T +F
Sbjct: 257 EDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVYYPRANTPEF 316
Query: 190 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLK 247
+ + + ++ GMR+KM FE EDS F GTV V+D P W S WR L+
Sbjct: 317 FVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADPLCWPGSPWRLLQ 376
Query: 248 VQWDEPASITRPDRVSPWEIE 268
V WDEP + RVSPW +E
Sbjct: 377 VTWDEPDLLQNVKRVSPWLVE 397
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
KV ++ VGR LDL L Y+ L +L +MF ++ ++ ++Y DD G +G
Sbjct: 622 CKVFLESEDVGRTLDLQLLESYEELYRKLADMFGLR---NSEKFSNLLYRDDNGITKHIG 678
Query: 560 DDPWHEFCNMVKRIFICS 577
++P+ F +R+ I +
Sbjct: 679 EEPFSNFSKTARRLTIVT 696
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 175/356 (49%), Gaps = 54/356 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGG 56
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + GG
Sbjct: 68 LADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGGG 127
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 128 FSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLTTGWSSFVN 187
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP----------------SSVISSQSM 160
K+LVAGD+ VFLR ENGEL VG+R R P S+ + +
Sbjct: 188 QKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEMS 247
Query: 161 HLGVLAT------------------ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAV 200
G L + A+H ++ F V Y PR T +F + + A+
Sbjct: 248 KNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVRASSVNAAM 307
Query: 201 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 258
++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP +
Sbjct: 308 RIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPDLLQN 367
Query: 259 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 307
VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 368 VKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 554
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 555 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 583
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 177/374 (47%), Gaps = 79/374 (21%)
Query: 1 MAEQETDEVYAQITLLPEPS----------QNEPTTPDPCPADSPRPKVHSFSKVLTASD 50
+A+ ETDEVYA++ L PE + +E P + P SF+K LT SD
Sbjct: 119 LADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKP----ASFAKTLTQSD 174
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 175 ANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLTTG 234
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR---------------QQSSMPSSV- 154
WSTFV K+LVAGD VFLR +GEL VGVR R Q S+P +
Sbjct: 235 WSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQRSLPQNSS 294
Query: 155 ---ISSQSMHLGVLATASHAVATQTM------------------------FVVYYKPR-- 185
I S+S + +L+ + + F V Y PR
Sbjct: 295 RWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRAS 354
Query: 186 TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 243
T++F + + ++ + + GMR+KM FE EDS F GT+ V+ P W S W
Sbjct: 355 TAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPW 414
Query: 244 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSA 303
R L+V WDEP + +RVSPW++E LV L M++PP LP
Sbjct: 415 RILQVSWDEPDLLQGVNRVSPWQVE---------LVS---------TLPMQLPPFSLPRK 456
Query: 304 ASAPWSARLAQSHN 317
P + +S
Sbjct: 457 KIRPLDLQFGESQG 470
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ + VGR LDL+ Y+ L D L MF + K +L R +VY D EG + +G
Sbjct: 748 KIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGR----VVYRDLEGSTIYIG 803
Query: 560 DDPWHEFCNMVKRIFICS 577
+P+ F V+R+ I +
Sbjct: 804 GEPYGNFVKSVRRLTILA 821
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 160/317 (50%), Gaps = 50/317 (15%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ +TDEV+A+I L P EP + + + K SF+K LT SD + GG
Sbjct: 69 MADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPASFAKTLTQSDANNGGG 128
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 129 FSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVN 188
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV--------------ISSQSMHL 162
K+LVAGD+ VF+R ENG+L VG+R + P + + SM L
Sbjct: 189 QKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGGGYAGFSMFL 248
Query: 163 G---------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISL 193
V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 249 RGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCVKA 307
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
A+ ++ GMR+KM FE EDS F GTV V P W +S WR L+V WD
Sbjct: 308 GAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSPWRLLQVAWD 367
Query: 252 EPASITRPDRVSPWEIE 268
EP + RVSPW +E
Sbjct: 368 EPDLLQNVKRVSPWLVE 384
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 557
KV MQ VGR LDL+ + Y+ L L +MF + K +L + + Y DD G +
Sbjct: 632 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDKAELTS----HVFYRDDASGALKH 687
Query: 558 VGDDPWHEFCNMVKRIFICSSQ 579
GD+P+ EF +R+ I + +
Sbjct: 688 PGDEPFSEFTKTARRLTILTDE 709
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 168/322 (52%), Gaps = 33/322 (10%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
MA+ +TDEV+A+I L+P A + K SF+K LT SD + GGFSV
Sbjct: 80 MADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPASFAKTLTQSDANNGGGFSVP 139
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 140 RYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTGWSTFVNQKKL 199
Query: 121 VAGDTFVFLRGENGELHVGVR------C--------------------LARQQSSMPSSV 154
VAGD+ VFLRG++G+LHVG+R C L R S ++
Sbjct: 200 VAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYAGLMRGNVSPCAAA 259
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKM 212
+ + +A A+ A F Y PR S +F + A+ +++ GMR+KM
Sbjct: 260 KARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVRAAAVRAAMRVQWSPGMRFKM 319
Query: 213 RFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
FE EDS F GTV GV+ P W S WR L+V WDEP + RVSPW +E
Sbjct: 320 AFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVE-- 377
Query: 271 VASATPNL-VQPVLAKNKRPRL 291
+ S+ P + + K+PR+
Sbjct: 378 LVSSMPAIHLASFSPPRKKPRI 399
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 486 SQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG-QLHTRTKW 544
SQ + S L + KV ++ VGR LDL+ L +D L L EMF I+G +L +R
Sbjct: 611 SQQQVSELGLEPGQCKVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELRSR--- 667
Query: 545 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
++Y G++ GD+P+ +F +R+ I
Sbjct: 668 -VLYRCATGEVKHAGDEPFSDFVRSARRLTI 697
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 184/661 (27%), Positives = 262/661 (39%), Gaps = 145/661 (21%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA----DSPRPKVHSFSKVLTASDTSTHGG 56
+A+ E+DEVYA+I L+P + T D ++P K SF+K LT SD + GG
Sbjct: 66 LADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPE-KPASFAKTLTQSDANNGGG 124
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q ++AKD+HG WRF+HI+RG PRRHLLTTGWS FV
Sbjct: 125 FSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTTGWSNFVN 184
Query: 117 SKRLVAGDTFVFLRGENGELHVGVR------CLARQQSSMPSSVISSQSMHLGV------ 164
K LVAGD+ VFLR ENG+L VG+R C S + + S + G
Sbjct: 185 KKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRGYSGFLRE 244
Query: 165 ------------------------LATASHAVATQTMFVVYYKPRTS--QFIISLNKYLE 198
+A A+ A FV+ Y PR S +F + +
Sbjct: 245 DENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRA 304
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWR------------ 244
A+ ++ GM++KM FE +DS F G + V P W +S WR
Sbjct: 305 AMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVLEYEIQKI 364
Query: 245 -----------SLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLS 292
L+V WDEP + RV+PW +E + S P++ + P K+ RL
Sbjct: 365 VSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVE--LVSHVPSIHLSPFSPPRKKLRLQ 422
Query: 293 M--------EVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFS 344
++P S A P S S N+ A H + SD
Sbjct: 423 QQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGAR------HAQFGLSSSDLH 476
Query: 345 SNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTL 404
N K LF + + +A P+ + NN+ +
Sbjct: 477 FN-------------------KLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENI 517
Query: 405 LEQVETGRKTETGTSCR--------LFG--IELINHATSSAPSEKVPVSSLTTEGHIIST 454
+ G T+ LFG I + + S + +SS
Sbjct: 518 SCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDTAGISS---------- 567
Query: 455 ISAAADSDGKSDIAKEFKEKKQEQV-QVSPKESQSKQSCLTSNR-----------SRTKV 502
SDG + F + Q P+ES S + LT + KV
Sbjct: 568 ------SDGNPEKTPNFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKV 621
Query: 503 QMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDP 562
M+ VGR LDL+ L Y+ L +L MF I+ ++Y D+ G + +GD P
Sbjct: 622 FMESEDVGRTLDLSILGSYEELYRKLANMFGIE---RAEMLSNVLYRDEAGIVKHIGDAP 678
Query: 563 W 563
+
Sbjct: 679 F 679
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 175/356 (49%), Gaps = 54/356 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGG 56
+A+ ETDEVYA+I ++P ++ D S K +SF+K LT SD + GG
Sbjct: 68 LADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQSDANNGGG 127
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q + AKD+HG W+F+HI+RG PRRHLLTTGWS+FV
Sbjct: 128 FSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLTTGWSSFVN 187
Query: 117 SKRLVAGDTFVFLRGENGELHVGVR---------------------------CLARQQSS 149
K+LVAGD+ VFLR ENGEL VG+R R++ S
Sbjct: 188 QKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFSAFLREEMS 247
Query: 150 MPSSVISSQSMHLG--------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAV 200
++ S G V+ A A + Q VVYY + T +F + + A+
Sbjct: 248 KNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVRASSVNAAM 307
Query: 201 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITR 258
++ GMR+KM FE EDS F GT+ ++ P W +S WR L+V WDEP +
Sbjct: 308 RIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAWDEPDLLQN 367
Query: 259 PDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-------LDLPSAASAP 307
VSPW +E + S P + L+ PR + +PP LPS + P
Sbjct: 368 VKHVSPWLVE--LVSNMPVI---HLSPFSPPRKKLRLPPDFSLDSQFQLPSFSGNP 418
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGD 554
N KV ++ VGR LDL+ + Y+ L L MF + + + TR ++Y D G
Sbjct: 587 NTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR----VLYHDATGA 642
Query: 555 MMLVGDDPWHEFCNMVKR--IFICSSQDVKK 583
+ GD+P+ +F KR I + SS ++K+
Sbjct: 643 VKHTGDEPFSDFVKSAKRLTILMNSSSNIKR 673
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/326 (37%), Positives = 162/326 (49%), Gaps = 62/326 (19%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 81 LADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSVP 139
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KRL
Sbjct: 140 RYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKRL 199
Query: 121 VAGDTFVFLRGENGELHVGVR--------------------------------------- 141
VAGD+ VF+R NG+L VG+R
Sbjct: 200 VAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGEE 259
Query: 142 --CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
AR + + P V+ + ++ A + Q VVYY PR S +F +
Sbjct: 260 DDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PRASTPEFCVKAG 308
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V WDE
Sbjct: 309 AVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDE 368
Query: 253 PASITRPDRVSPWEIEPFVASATPNL 278
P + RVSPW +E + S+TP +
Sbjct: 369 PDLLQNVKRVSPWLVE--LVSSTPAI 392
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 557
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 622 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKH 677
Query: 558 VGDDPWHEFCNMVKRIFI 575
GD+P+ EF +R+ I
Sbjct: 678 AGDEPFSEFTKTARRLTI 695
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 279/658 (42%), Gaps = 131/658 (19%)
Query: 1 MAEQETDEVYAQITLLPEPSQ-------------NEPTTPDPCPADSPRPKVHSFSKVLT 47
MA+ ETDEV+A+I L P + NE + D K SF+K LT
Sbjct: 73 MADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQD---------KPTSFAKTLT 123
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
SD + GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLL 183
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQ-------------QSSMPSSV 154
TTGWS+FV K+LVAGD+ VFLR E G+L +GVR R +S S V
Sbjct: 184 TTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNSGSSLV 243
Query: 155 ISSQSM-----HLG----------------VLATASHAVATQTMFVVYYK-PRTSQFIIS 192
S M LG V+ A A + Q+ +VYY T +F++
Sbjct: 244 GYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTPEFVVK 303
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
+ A+ + MR+KM FE EDS F GTV ++ P W DS WR L+V W
Sbjct: 304 ASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWRMLQVTW 363
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLSMEVPPLDLPSAASAPWS 309
DEP + V+PW +E V P + V P K+PR ++ +S
Sbjct: 364 DEPDLLQNVKSVNPWLVE--VVVNMPAIHVSPFSPPRKKPRFPLQADSSGFGHLPMPSFS 421
Query: 310 ARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQ 369
+ + N Q +TA A +H+ F L+SP ++ S+
Sbjct: 422 TNIFDTTNPLQ-GITANKIPAGIQGA---RHTQFG---------------LSSPNLQISK 462
Query: 370 QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCRLFGIELIN 429
L + S H +TP P D G K +C L+ + + N
Sbjct: 463 LLPGQ-------FSPGLKHLDDATPLPGIRGEDIF-----AGMKNP--DNCSLW-LPMRN 507
Query: 430 H------ATSSAPSEKVPVSSLTTEGHII-----------STISAAADSDGKSDIAKEFK 472
H ++ + E S T HII ++ S + D+ SD +E
Sbjct: 508 HIQSSKESSKESSKESSKESKETKPAHIILFGQLIFPNQQNSNSCSGDTMNASDANQEKA 567
Query: 473 EKKQEQVQVSPKESQSKQ------SCLTSNRSRTKVQMQGVA---------VGRALDLTT 517
+ +S +++ S + S L + + ++ + + V VG LDL++
Sbjct: 568 SNLSDGSGLSSQQNGSLENSSEGGSTLYNGQDKSGLSLDTVYCKVFVELENVGCNLDLSS 627
Query: 518 LVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
L Y+ L +L M + + ++Y D G VG++P+ EF +++ I
Sbjct: 628 LRSYEELYRKLGNMVGLGSSEMLNS---VLYQDTLGATKHVGEEPFSEFLKKAQKLTI 682
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 171/346 (49%), Gaps = 56/346 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 80 MADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANN 139
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 140 GGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWST 199
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ--------------- 158
FV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 200 FVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGF 259
Query: 159 SMHLG------------------------VLATASHAVATQTMFVVYYKPRTS--QFIIS 192
SM L V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 260 SMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCVK 318
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V W
Sbjct: 319 AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSW 378
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
DEP + RVSPW +E + S P + LA PR + VP
Sbjct: 379 DEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 558
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G +
Sbjct: 617 CKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHT 672
Query: 559 GDDPWHEFCNMVKRIFICS 577
GD+P+ EF +R+ I +
Sbjct: 673 GDEPFSEFTKTARRLNILT 691
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 171/346 (49%), Gaps = 56/346 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNE-------PTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ +TDEV+A+I L+P + + A + K SF+K LT SD +
Sbjct: 80 MADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQSDANN 139
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 140 GGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWST 199
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ--------------- 158
FV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 200 FVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGF 259
Query: 159 SMHLG------------------------VLATASHAVATQTMFVVYYKPRTS--QFIIS 192
SM L V+ A+ AV+ Q VVYY PR S +F +
Sbjct: 260 SMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRASTPEFCVK 318
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V W
Sbjct: 319 AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSW 378
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
DEP + RVSPW +E + S P + LA PR + VP
Sbjct: 379 DEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 419
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 558
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G +
Sbjct: 617 CKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHT 672
Query: 559 GDDPWHEFCNMVKRIFICS 577
GD+P+ EF +R+ I +
Sbjct: 673 GDEPFSEFTKTARRLNILT 691
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 185/368 (50%), Gaps = 68/368 (18%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ ETDEV+A++ ++P S+ + D A+ K SF+K LT SD + GGFSV
Sbjct: 68 LADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSE-KPASFAKTLTQSDANNGGGFSV 126
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS+FV K+
Sbjct: 127 PRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKK 186
Query: 120 LVAGDTFVFLRGENGELHVGVR-------------------------------------- 141
LVAGD+ VFLR ENG+L VG+R
Sbjct: 187 LVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPGLGLGPGPGPY 246
Query: 142 ----CLARQQSSMPSS---VISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISL 193
R++S + S +S +S+ V AS+ Q VVYY + T +F I
Sbjct: 247 GAFSGFLREESKVVRSGRPKVSGESVREAVTLAASN----QPFEVVYYPRANTPEFCIRT 302
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
+ A+ +++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WD
Sbjct: 303 SAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWRLLQVTWD 362
Query: 252 EPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD----LPS 302
EP + RVSPW +E + S P + LA PR + P PLD +PS
Sbjct: 363 EPDLLHNVKRVSPWLVE--LVSNVPII---HLAPFSPPRKKLRFPQHPEFPLDFQFPIPS 417
Query: 303 AASAPWSA 310
+ P+ +
Sbjct: 418 FSGNPFGS 425
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 552
+ S+ S KV ++ VGR LDL+ L Y+ L L MF I+ + ++Y D
Sbjct: 583 VGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFGIE---RSEMLSHVLYRDAA 639
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
G + G++P+ EF KR+ I + + K
Sbjct: 640 GALKQTGEEPFSEFMKTAKRLTILTDSNNK 669
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/420 (34%), Positives = 194/420 (46%), Gaps = 76/420 (18%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ ETDEV+A+I L PE + D A P K SF+K LT SD + GGFS+
Sbjct: 95 LADTETDEVFARICLQPEIGSSAQDLTDDSLASPPLEKPASFAKTLTQSDANNGGGFSIP 154
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A PPLD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 155 RYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKL 214
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSS----------MPSSVI----------SSQSM 160
VAGD VFLR +GEL VGVR R S+ +S I S S
Sbjct: 215 VAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWEVKGTESFSD 274
Query: 161 HLGVLATASHAVATQTMFVVYYKPRTSQFI-----ISLNKYLEAV-----NNKFAV---- 206
LG + +A+ + P TS F ++ LEA +F V
Sbjct: 275 FLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGERFEVVYYP 334
Query: 207 ------------------------GMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKD 240
GMR+KM FE EDS F GT+ V+ P W
Sbjct: 335 RASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPS 394
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR------LSME 294
S WR L+V WDEP + +RVSPW++E + + P + PV K+ R L ++
Sbjct: 395 SPWRVLQVTWDEPDLLQGVNRVSPWQLE--LVATLPMQLPPVSLPKKKLRTVQPQELPLQ 452
Query: 295 VPP-LDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDFSS----NSNF 349
P L LP A ++ + LA SV +D + A H + + + NSN+
Sbjct: 453 PPGLLSLPLAGTSNFGGHLATPWG---SSVLLDDASVGMQGARHDQFNGLPTVDFRNSNY 509
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 154/317 (48%), Gaps = 50/317 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP---------RPKVHSFSKVLTASDT 51
+A+ ETDEV+A+ITLLP P + D +P + K SF+K LT SD
Sbjct: 65 LADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDA 124
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD + P Q + AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 125 NNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRRHLLTTGW 184
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR------QQSSMP------------SS 153
STFV K+L+AGD+ VFLR E+G+L VG+R R S P S+
Sbjct: 185 STFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSGFLRDDEST 244
Query: 154 VISSQSMHL-------------------GVLATASHAVATQTMFVVYYKPRTS--QFIIS 192
+S+ M + V + F V Y PR S +F +
Sbjct: 245 TTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRASTPEFCVK 304
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
A+ + GMR KM FE EDS F GT V+ P W +S WR L+V W
Sbjct: 305 AADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNSPWRLLQVAW 364
Query: 251 DEPASITRPDRVSPWEI 267
DEP RVSPW +
Sbjct: 365 DEPDLXQNVKRVSPWLV 381
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + L +L EMF I+ + T + Y D G + +GD
Sbjct: 585 KVFMESEDVGRTLDLSVIGSVQELYRKLAEMFHIEERPDLVT--HVGYRDANGVIKRIGD 642
Query: 561 DPWHEFCNMVKRIFI 575
+P+ +F KR+ I
Sbjct: 643 EPFSDFMKATKRLTI 657
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 173/354 (48%), Gaps = 60/354 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP---------KVHSFSKVLTASDT 51
MA+ +TDEV+A+I L+P +P K SF+K LT SD
Sbjct: 86 MADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKPASFAKTLTQSDA 145
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 146 NNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 205
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVR----------------------------CL 143
S+FV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 206 SSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPPPPGTNYGGFSMF 265
Query: 144 ARQQSSMPSSVISSQSMHLGV---------LATASHAVATQTMFVVYYKPRTS--QFIIS 192
R + + ++++ + G +A A++ A+ F V Y PR S +F +
Sbjct: 266 LRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVYYPRASTPEFCVK 325
Query: 193 LNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQW 250
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+V W
Sbjct: 326 AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIRWPNSPWRLLQVTW 385
Query: 251 DEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP-----PLD 299
DEP + RVSPW +E + S P + LA PR + VP PLD
Sbjct: 386 DEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVPFYPELPLD 434
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ MQ VGR LDL + YD L L +MF I+ R ++ Y D G + G
Sbjct: 627 CKIFMQSEDVGRTLDLAAVGSYDELYRRLADMFGIEKAELMR---QVFYRDAAGALKHTG 683
Query: 560 DDPWHEFCNMVKRIFICSS 578
D+P+ +F +R+ I +
Sbjct: 684 DEPFSDFTKTARRLTILTG 702
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 191/362 (52%), Gaps = 66/362 (18%)
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 307
VQWDEP+SI RPD+VS WE+EP VAS P QP +NKRPR P LPS S+P
Sbjct: 1 VQWDEPSSILRPDKVSAWELEPLVAS-NPLSTQPT-QRNKRPR------PTVLPS--SSP 50
Query: 308 WSARLAQSHNLTQLSV--TAEDKRIDNHVAWHHKHSDFSSNS------NFMSRTQSDGEW 359
+ L + S AE +R + K S +SNS + + S+ W
Sbjct: 51 DATVLGGWKPTVESSTFSYAEPQR-GRDLYSSPKFSTAASNSLGFNANSSLGAVSSNNYW 109
Query: 360 LTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTS 419
+ RV +NI +H + P VE + + G
Sbjct: 110 CNTNRV--------------ENIMDPSSHGANREP-------------VEKKQNSRNG-- 140
Query: 420 CRLFGIELINHATSSAPSEKVPVSS--LTTEGHIISTISAAADSDG------KSDIAKEF 471
CRLFGI+L+ ++ E PVS+ + E ++ I + +SDI
Sbjct: 141 CRLFGIQLLGNSNV---DEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSNIHRSDIPS-I 196
Query: 472 KEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEM 531
+ +SP ESQS+Q RS TKV MQG+AVGRA+DLT YD L+ +LEEM
Sbjct: 197 SCDADKSCLISPLESQSRQI-----RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEM 251
Query: 532 FDIKGQL-HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
FDI+G+L + KW++VYTDDE DMMLVGDDPW+EFC+MV++IFI ++++VK++SP KL
Sbjct: 252 FDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLSPKIKL 311
Query: 591 PM 592
P+
Sbjct: 312 PL 313
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 154/290 (53%), Gaps = 41/290 (14%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPC---PADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P P + E PD PAD+ R K+ SF+K LT SD + GG
Sbjct: 71 LADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADA-REKLSSFAKTLTQSDANNGGG 129
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 130 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 189
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLA---------- 166
K+LVAGD+ VFLR E+GEL VG+R + R + + G L+
Sbjct: 190 QKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFLKDEEGKM 249
Query: 167 ---------------------TASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
AS A + Q VVYY PR S +F++ A+ N+
Sbjct: 250 MKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRNQ 308
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
+ GMR+KM FE EDS F GT+ + P W +S WR L+V D
Sbjct: 309 WCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 159/323 (49%), Gaps = 46/323 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPC--------PADSPRPKVHSFSKVLTASDTS 52
MA+ +TDEVY ++ L P + D C ++ SF+K LT SD +
Sbjct: 70 MADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKTLTQSDAN 129
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
GGFSV R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTGWS 189
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--------------------------Q 146
FV KRLVAGD+ VFLR ENG+L VG+R +
Sbjct: 190 NFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGGGGFLCGS 249
Query: 147 QSSMPSSVISSQSMHL-------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 197
+SS S S + V+ + AV + VVYY PR S +F + +
Sbjct: 250 ESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYY-PRASSPEFCVKASVVK 308
Query: 198 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 255
A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V WDEP
Sbjct: 309 AAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVVWDEPDL 368
Query: 256 ITRPDRVSPWEIEPFVASATPNL 278
+ V+PW +E T NL
Sbjct: 369 LQNVKCVNPWLVELVSNMPTFNL 391
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 169/361 (46%), Gaps = 59/361 (16%)
Query: 1 MAEQETDEVYAQITLLPEPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 54
MA+ ETDEV+A+I L+P S E A K SF+K LT SD +
Sbjct: 77 MADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQSDANNG 136
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q L+AKD+HG W+F+HI+RG PRRHLLTTGWS F
Sbjct: 137 GGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLTTGWSPF 196
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV-------------------- 154
V K+L+AGD+ VF R ENG+L VGVR R P S+
Sbjct: 197 VNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVPSGGFGAFLR 256
Query: 155 -----------------ISSQSMHLGVLATASHAVATQTM------FVVYYKPR--TSQF 189
S++S+ A + T+ F V Y PR T +F
Sbjct: 257 EDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVYYPRANTPEF 316
Query: 190 IISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF-SPHWKDSKWRSLK 247
+ + A+ ++ GMR+KM FE EDS F GTV V+ S W S WR L+
Sbjct: 317 CVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWWPHSPWRLLQ 376
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP-LDLPSAASA 306
V WDEP + RVSPW +E +AS + P + PR + +P LD P
Sbjct: 377 VTWDEPDLLQNVKRVSPWLVE--LASNMAAIHFPPFSS---PRKKLRLPQHLDFPIDGQF 431
Query: 307 P 307
P
Sbjct: 432 P 432
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
E++Q + + Q + L + KV M VGR LDL+ L Y+ L +L MF ++
Sbjct: 601 EELQWNKDKHQKSEPSLET--GHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLR- 657
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS 577
++ ++Y D G +G++P+ +F +R+ I +
Sbjct: 658 --NSEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVT 696
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 158/322 (49%), Gaps = 44/322 (13%)
Query: 1 MAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
G R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 137 GRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG----- 163
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRN 256
Query: 164 --------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
VL A+ A Q V+YY PR S +F + A+
Sbjct: 257 ATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAMA 315
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRP 259
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V WDEP +
Sbjct: 316 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQNV 375
Query: 260 DRVSPWEIEPFVASATPNLVQP 281
RV PW +E + S+ PNL P
Sbjct: 376 KRVCPWLVE--LVSSMPNLHLP 395
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 547
S+ S N + KV ++ VGR+LDL+ L ++ L L +MF I G R+ +V
Sbjct: 604 SRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSI-GSDELRS--HLV 660
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
Y G++ GD+P+ F +++ I
Sbjct: 661 YRSPAGEVKHAGDEPFCAFVKSARKLRI 688
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 148/277 (53%), Gaps = 29/277 (10%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
MA+ ETDEVYA+I L+P P+ K SF+K LT SD + GGFSV
Sbjct: 67 MADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPASFAKTLTQSDANNGGGFSVP 126
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A PPLD + P Q +VA D+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 127 RYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKL 186
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMP---SSVIS------SQSMHL--------- 162
VAGD+ VFLR ENG L VG+R R + P S +S S+ M +
Sbjct: 187 VAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKMMMMNRNGDWRGK 246
Query: 163 ------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRF 214
VL A+ A + Q VVYY PR S +F + + A+ + GMR+KM F
Sbjct: 247 GKLKAEAVLQAATLAASGQPFEVVYY-PRASTPEFCVKASSVKAAMRVPWCCGMRFKMAF 305
Query: 215 EGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
E EDS F GTV V+ P W +S WR +++
Sbjct: 306 ETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQLE 342
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 162/338 (47%), Gaps = 50/338 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPKVHSFSKVLTASDTS 52
MA+ ++DEV+A+I LLP + EP +P D+ K SF+K LT SD +
Sbjct: 78 MADPQSDEVFAKIRLLPL-RRGEPVADVGEAAAAREPLQQDADNNKPASFAKTLTQSDAN 136
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
GGFSV R A P LD P Q + +D+HG E++F+HI+RG PRRHLLTTGWS
Sbjct: 137 NGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPRRHLLTTGWS 196
Query: 113 TFVTSKRLVAGDTFVFLRGE---------NGELHVGVRCLARQQSSMPSSVISSQSMHLG 163
FV K+L+AGD+ VFLR + + R PSS S + G
Sbjct: 197 NFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSAASGWDHYRG 256
Query: 164 VLATASHAVATQT-------------------------MFVVYYKPRTS--QFIISLNKY 196
++ + + +F V Y PR S +F +
Sbjct: 257 LMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRASTPEFCVRAGAV 316
Query: 197 LEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPA 254
A+ ++ GMR+KM FE EDS F GTV GV P HW S WR L+V WDEP
Sbjct: 317 KAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPWRLLQVSWDEPE 376
Query: 255 SITRPDRVSPWEIEPFVASATPNLVQPVLA-KNKRPRL 291
+ RV PW +E + S+ PNL P + K+PR+
Sbjct: 377 LLQNVKRVCPWLVE--LVSSMPNLHLPSFSPPRKKPRI 412
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 557
+ KV ++ A+GR LDL+ L ++ L + +MFDI+ + + Y G++
Sbjct: 636 GQCKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIE---SAELRNNVHYRSAAGEVKN 692
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD+P+ F +R+ I
Sbjct: 693 VGDEPFRAFVKSARRLTI 710
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 123/196 (62%), Gaps = 10/196 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPD-PCPADSPRPKV---------HSFSKVLTASDT 51
A+ DEVYAQ+ L+P+ Q E D AD+ + H F K LTASDT
Sbjct: 41 ADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTTPHMFCKTLTASDT 100
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
STHGGFSV R+ A +C PPLD Q P+QELVAKDLHG W+F+HI+RGQPRRHLLTTGW
Sbjct: 101 STHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIYRGQPRRHLLTTGW 160
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHA 171
S FV K+LV+GD +FLR +GEL +GVR A+ ++ SQ +++ + +A
Sbjct: 161 SAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSNYLAPYSQLLNVSGIVDVVNA 220
Query: 172 VATQTMFVVYYKPRTS 187
++++ F + Y PR S
Sbjct: 221 ISSRNAFNICYNPRAS 236
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 161/323 (49%), Gaps = 48/323 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPC---------PADSPRPKV-HSFSKVLTASD 50
MA+ +TDEVY ++ L P + D C D + K SF+K LT SD
Sbjct: 69 MADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSFAKTLTQSD 128
Query: 51 TSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
+ GGFSV R A P LD + P Q ++AKD+ G W+F+HI+RG PRRHLLTTG
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPRRHLLTTG 188
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVR-------------------------CLAR 145
WS FV KRLVAGD+ VFLR ENG+L VG+R L
Sbjct: 189 WSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLFGGGFLCG 248
Query: 146 QQSSMPSSVISSQSMHLG------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 197
+S++ S M +G V+ + AV + VVYY PR S +F + +
Sbjct: 249 SESNLMSG--GDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYY-PRASSPEFCVKASVVK 305
Query: 198 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 255
A+ ++ GMR+KM FE EDS F GT+ V+ P W DS WR L+V WDEP
Sbjct: 306 AAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQVVWDEPDL 365
Query: 256 ITRPDRVSPWEIEPFVASATPNL 278
+ V+PW +E T NL
Sbjct: 366 LQNVKCVNPWLVELVSNMPTFNL 388
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 172/351 (49%), Gaps = 55/351 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ ETDEVYA+I L+P E D ++ +P F+K LT SD + GGFSV
Sbjct: 68 LADTETDEVYAKIRLIPV----EDFEDDSVVEETEKPAF--FAKTLTQSDANNGGGFSVP 121
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD P Q + AKD+HG W F+HI+RG PRRHLLT+GWS FV K+L
Sbjct: 122 RYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGWSAFVNKKKL 181
Query: 121 VAGDTFVFLRGENGELHVGVRCLAR--------------------------QQSSMPSSV 154
VAG + VF++ EN EL VG+R + R + SS ++
Sbjct: 182 VAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTEDENSSTNGNL 241
Query: 155 ISSQSMHLG--------VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFA 205
IS V+ + A Q +VYY T ++ + + A++ ++
Sbjct: 242 ISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASSVRAAMSVQWC 301
Query: 206 VGMRYKMRFEGED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVS 263
GMR+KM FE ED S F G++ V+ P W S WR L+V WDEP + V+
Sbjct: 302 SGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEPDLLQNVKSVN 361
Query: 264 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP---PLD----LPSAASAP 307
PW +E + S P++ L+ N PR + +P P D LPS + P
Sbjct: 362 PWLVE--LVSNMPDI---NLSHNSPPRKRLCLPQEFPFDGQFPLPSFSGNP 407
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDE 552
L ++ KV + VGR LDL+ L Y L L +MF+++ +L T+ ++Y D
Sbjct: 570 LGASTDHCKVFLDSEDVGRTLDLSVLGSYAELYKRLADMFEME-RLDMVTR--VLYLDAT 626
Query: 553 GDMMLVGDDPWHEFCNMVKRIFI 575
G +GD+P+ +F KR+ I
Sbjct: 627 GASKQIGDEPFSDFIKTAKRLTI 649
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 146/281 (51%), Gaps = 30/281 (10%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
MA+ +TDEV+A+I L+P +++ D A K SF+K LT SD + GGFSV
Sbjct: 78 MADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQSDANNGGGFSV 137
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD P Q +VAKD+HG W F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 138 PRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGWSTFVNQKK 197
Query: 120 LVAGDTFVFLRGENGELHVGVR------C-------------------LARQQSSMPSSV 154
LVAGD+ VFLRG+ G+LHVG+R C L R +S ++
Sbjct: 198 LVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLMRGNASPCAAA 257
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKM 212
+ L A+ F V Y PR S +F + A+ ++ GMR+KM
Sbjct: 258 KGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKM 317
Query: 213 RFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWD 251
FE EDS F GTV V+ P W S WR L+V+++
Sbjct: 318 AFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYN 358
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 152/288 (52%), Gaps = 43/288 (14%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + GG
Sbjct: 74 LADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGGG 132
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 133 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFVN 192
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------- 162
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 193 QKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGKI 252
Query: 163 -----------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
V+ AS A + Q VVYY PR S +F++ A+ N+
Sbjct: 253 TKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRNQ 311
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTVVG--VEDFSPHWKDSKWRSLKV 248
+ GMR+KM FE EDS F GT+ V D + W +S WR L+V
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTIASAQVAD-TIRWPNSPWRLLQV 358
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 161/304 (52%), Gaps = 37/304 (12%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHSFSKVLTASDTS 52
+A+Q+TDEV+A+I L P E T + D KV SF K+LT+SD +
Sbjct: 71 LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG PRRHLLTTGWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190
Query: 113 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMPSSVISSQSMHL 162
FV K+LVAGD+ VF+ R N EL +GVR AR +S++ +V + + +
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGSI 250
Query: 163 GVLATASHA------------VATQTM-FVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 207
+ +S +A Q M F V Y PR +S F++ EA++ + G
Sbjct: 251 EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGG 310
Query: 208 MRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 264
MR KM E EDS + F GTV V D P W+ S WR L+V WDEP + RVSP
Sbjct: 311 MRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQVTWDEPEVLQNVMRVSP 369
Query: 265 WEIE 268
W++E
Sbjct: 370 WQVE 373
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD P QEL+AKDLH W+F+HI+RGQP+RHLLTTGWS FV++KRL
Sbjct: 146 RRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRL 205
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
+AGD+ +F+R E +L +G+R R Q ++ SSV+SS SMH+G+LA A+HA A + F +
Sbjct: 206 LAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTI 265
Query: 181 YYKPR-TSQFIIS 192
+Y PR S ++IS
Sbjct: 266 FYNPRYYSSYLIS 278
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 164/300 (54%), Gaps = 32/300 (10%)
Query: 2 AEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+ ETDEVYAQ+TL P QN+P P S +P + F K LTASDTSTHGGFSV
Sbjct: 87 ADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTASDTSTHGGFSV 145
Query: 60 LRKHATECLPPL----------------DMNQSTPTQELVAKDLHG-YEWRFKHIFRG-- 100
R+ A PPL Q P ++L W + + R
Sbjct: 146 PRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPGSWNGRALARKSR 205
Query: 101 --QPRRHLLTTGWSTFVTSKRLVAGDTFV----FLRGENGELHVGVRCLARQQSSMPSSV 154
+P R + T T++R V L E +L +G+R +R Q+ MPSSV
Sbjct: 206 TEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLGNEKNQLLLGIRRASRPQTVMPSSV 265
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRYK 211
+SS SMH+G+LA A+HA AT + F +++ PR S+F+I L+KY++AV + + +VGMR++
Sbjct: 266 LSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFR 325
Query: 212 MRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
M FE E+S RR+ GT+ V D P W S WRS+KV WDE + RP RVS WEIEP
Sbjct: 326 MLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 385
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 733 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 791
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 792 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 828
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 150/313 (47%), Gaps = 38/313 (12%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 81 LADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSVP 139
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KRL
Sbjct: 140 RYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKRL 199
Query: 121 VAGDTFVFLR-GENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT----- 174
VAGD+ VF+R G G+L VG+R + Q G +T
Sbjct: 200 VAGDSIVFMRTGGTGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGE 259
Query: 175 ------------QTMFVVYYKPRTSQFIISLNKYLEAVN---------------NKFAVG 207
+PR + + YL N ++ G
Sbjct: 260 EDDEGQGQGAGAAGGGRRGRQPRGERAAVRGGLYLPKANTQSCASRRGRSAHHVTQWCAG 319
Query: 208 MRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPW 265
MR+KM FE EDS F GTV V+ P W +S WR L+V WDEP + RVSPW
Sbjct: 320 MRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPW 379
Query: 266 EIEPFVASATPNL 278
+E + S+TP +
Sbjct: 380 LVE--LVSSTPAI 390
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMMLV 558
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 621 KVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKHA 676
Query: 559 GDDPWHEFCNMVKRIFI 575
GD+P+ EF +R+ I
Sbjct: 677 GDEPFSEFTKTARRLTI 693
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 92/113 (81%)
Query: 39 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 98
VH F K LTASDTSTHGGFSVLR+H ECLPPLDM+Q+ P QELVAKD+HG E F+HIF
Sbjct: 103 VHPFCKTLTASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIF 162
Query: 99 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP 151
+GQPR HLLTTGWS FV++KRL GD +FLR ENGEL VGVR L RQ +++P
Sbjct: 163 QGQPRCHLLTTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 162/321 (50%), Gaps = 45/321 (14%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ +TDEV+A++ L P + + N P P D R + SF+K+LT SD + GGFS
Sbjct: 76 LADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGER--ISSFAKILTPSDANNGGGFS 133
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A PPLD + P Q L+ D+HG W F+HI+RG PRRHLLTTGWS FV +K
Sbjct: 134 VPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKFVNAK 193
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHL-----GVL-------- 165
+LVAGD+ VF++ G + +G+R R + SS + S L GV
Sbjct: 194 KLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSRVDDEEK 253
Query: 166 -----ATASHA--------------VATQTM-FVVYYKPRT--SQFIISLNKYLEAVNNK 203
A + H +A Q M F V Y PR S F++ A++
Sbjct: 254 LVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLKAEVVDAAMSVT 313
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDEPASITRPD 260
+ GMR KM E +DS F G V V V D W+ S WR L + WDEP +
Sbjct: 314 WCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHG-AWRGSPWRMLHITWDEPEVLQTSK 372
Query: 261 RVSPWEIEPFVASATPNLVQP 281
VSPW++E + S TP+L P
Sbjct: 373 WVSPWQVE--LLSTTPSLHTP 391
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 158/303 (52%), Gaps = 28/303 (9%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTP--------DPCPADSPRPKVHSFSKVLTASDTS 52
MAE +TDE++ +I L P S EP T D P V S +K LT SD+
Sbjct: 90 MAELDTDEIFVKIRLDPLRS-GEPLTDVGEAQVVNDEAGQRQPTRPVISSAKTLTKSDSY 148
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
+ G SV R A P LD + P Q + A+D+HG EW F+H++RG P R+LLTTGWS
Sbjct: 149 SGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNLLTTGWS 208
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--QQSSMPSSVISSQSMHLGVLATA-- 168
FV SK++V GD+ VFLR E+G +H+G+R R ++++ ++ + G A
Sbjct: 209 DFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGAAADGVL 268
Query: 169 ---------SHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
A F V + PR + F + + +EA+ + G+R+KM FE +
Sbjct: 269 RAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPGLRFKMAFEAK 328
Query: 218 D-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
D S F GTV GV P W S WR L+V WDEP + +R+SPW++E + +
Sbjct: 329 DLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE--LVATM 386
Query: 276 PNL 278
PNL
Sbjct: 387 PNL 389
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 149/296 (50%), Gaps = 49/296 (16%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDP-CP------ADSPRP-KVHSFSKVLTASDT 51
+A++++DEVYA+I L P P + E PD CP A P P K SF+K LT SD
Sbjct: 78 LADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAKTLTQSDA 137
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 138 NNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGW 197
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLG-------- 163
STFV K+LVAGD+ VFLR +GEL VG+R R + + G
Sbjct: 198 STFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGFSAFL 257
Query: 164 ---------------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
V+ AS A + Q V YY PR S F++
Sbjct: 258 KEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYY-PRASTPDFVVKAA 316
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPH-WKDSKWRSLKV 248
A+ ++ GMR+KM FE EDS F GT+ V+ P+ W +S WR L+V
Sbjct: 317 SVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQV 372
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 152/320 (47%), Gaps = 47/320 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTP-----------DPCPADSPRPKVHSFSKVLTAS 49
+A+ TDEVY ++ L P S N P+ P D K+ +F+K+LT S
Sbjct: 79 LADPVTDEVYTKLLLFPIDSFN-PSVPVLEHSGNLEQHHGYDYDDDEDKIVAFAKILTPS 137
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A PPL+ + P Q L D+HG W F+HI+RG PRRHLLTT
Sbjct: 138 DANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPRRHLLTT 197
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------CLARQQSS 149
GWS FV K+L+AGD+ VF+R G++ +GVR C
Sbjct: 198 GWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARWREQIACFGGGGGD 257
Query: 150 MPSSVISSQSMHLGVLATASHAV-------ATQTMFVVYYKPRT---SQFIISLNKYLEA 199
+ V G + AV A F V Y PR S F++ + A
Sbjct: 258 VKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWYSDFVVRTDVVDGA 317
Query: 200 VNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSLKVQWDEPASI 256
+ ++ GMR KM E EDS F GT+ + D W+ S WR L+V WDEP +
Sbjct: 318 LAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCG-LWRGSPWRMLQVAWDEPEVL 376
Query: 257 TRPDRVSPWEIEPFVASATP 276
RVSPW++E +V+ + P
Sbjct: 377 QNAKRVSPWQVE-YVSPSPP 395
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 150/275 (54%), Gaps = 20/275 (7%)
Query: 1 MAEQETDEVYAQITLLPEPSQ--NEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ TDEV+ ++ L P ++ +EP + + KV S+SK LT SD + G FS
Sbjct: 70 LADLCTDEVFVKLLLTPVTNKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSDANNGGAFS 129
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V + A PPLD+N P QEL D+HG W+F+H++RG P RHLLTT WS FV K
Sbjct: 130 VPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTDWSEFVDKK 189
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
RLV GD+ +F++ +G + VGVR RQ ++ I+ +S A F
Sbjct: 190 RLVGGDSLIFMKDSDGNISVGVR---RQTKFGGAAKITEKS-----FTEAVELADKNLAF 241
Query: 179 VVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVVGVED 233
V Y P F++ +A+N +++G+R ++ + DS +R +F GT+ +
Sbjct: 242 EVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEGTISALS- 300
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+P + WR L+V+WDEP P+RVSPWE+E
Sbjct: 301 -AP---NCPWRMLEVKWDEPKVSQVPERVSPWEVE 331
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 141/266 (53%), Gaps = 40/266 (15%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A+I L+P E EP P D+ R K+ SF+K LT SD + GG
Sbjct: 74 LADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDA-REKLSSFAKTLTQSDANNGGG 132
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HIFRG PRRHLLTTGWS FV
Sbjct: 133 FSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLTTGWSAFVN 192
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQ-------SSMPSSVISSQSMHL------- 162
K+LVAGD+ VFLR E+GEL VG+R R S + V + S L
Sbjct: 193 QKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAFLKDEEGKI 252
Query: 163 -----------------GVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNK 203
V+ AS A + Q VVYY PR S +F++ A+ N+
Sbjct: 253 TKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYY-PRASTPEFVVKAASVQNAMRNQ 311
Query: 204 FAVGMRYKMRFEGEDSPERR-FSGTV 228
+ GMR+KM FE EDS F GT+
Sbjct: 312 WCPGMRFKMAFETEDSSRISWFMGTI 337
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 144/290 (49%), Gaps = 42/290 (14%)
Query: 1 MAEQETDEVYAQITLLP-EPSQ------NEPTTPDPCPADSPRPKVHSFSKVLTASDTST 53
MA+ E+DEV+A+I L+P P ++ RP+ SF+K LT SD +
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P LD + P Q + AKD+HG EW F+HI+RG PRRHLLTTGWS
Sbjct: 137 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----SVISSQSMHLG----- 163
FV K+L AGD+ VF+R E G +HVG+R R S+ S I + G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRGLMRRN 256
Query: 164 --------------------VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVN 201
VL A+ A Q V+YY PR S +F + A+
Sbjct: 257 ATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYY-PRASTPEFCVRAAAVRTAMA 315
Query: 202 NKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
++ GMR+KM FE EDS F GTV GV+ P W S WR L+V
Sbjct: 316 VQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVH 365
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 170/347 (48%), Gaps = 36/347 (10%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AE +TDEVYA+I L P SQ+E + ++ SF K+LT SD + GGFSV
Sbjct: 70 LAESDTDEVYARIFLHPI-SQSEVDEVTMREEEVVEDEIVSFVKILTPSDANNGGGFSVP 128
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD P Q L +D+ G W F+HI+RG PRRHLLTTGWS FV SK+L
Sbjct: 129 RFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSKQL 188
Query: 121 VAGDTFVFL-RGENGELHVGVRCLARQQS---SMPSSVISSQSMHLGVLATASHAVATQT 176
VAGD+ VF+ R N +L+VGVR R+ SS + + ++ G S +
Sbjct: 189 VAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDVSWGIRKGR 248
Query: 177 M-----------------FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGE 217
M F V PR + F++ + A+N + VGMR KM E E
Sbjct: 249 MTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMPWTVGMRVKMAVEAE 308
Query: 218 DSPERR-FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASAT 275
DS + GTV V + S W+ S WR L++ W+EP +RV+PW++E F
Sbjct: 309 DSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVECF----- 363
Query: 276 PNLVQPVLAKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLS 322
P + + P +++P LP +P+ S +T L
Sbjct: 364 -----PPIPQFLPPSKKIKLPNGLLPDGERSPFPMTGLGSFPMTGLG 405
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 156/326 (47%), Gaps = 72/326 (22%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A+ +TDEV A++ L P NEP D + K SF+K LT SD + GGFSV
Sbjct: 81 LADPDTDEVLARVRLAPV-RPNEPDHADAAAPGAREDKPASFAKTLTQSDANNGGGFSVP 139
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWS FV KRL
Sbjct: 140 RYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAFVNQKRL 199
Query: 121 VAGDTFVFLRGENGELHVGVR--------------------------------------- 141
VAGD+ VF+R NG+L VG+R
Sbjct: 200 VAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFSTFLRGEE 259
Query: 142 --CLARQQSSM---PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLN 194
AR + + P V+ + ++ A + Q VVYY PR S +F +
Sbjct: 260 DDAAARGKVRVLVRPEEVVEAANL----------AASGQPFEVVYY-PRASTPEFCVKAG 308
Query: 195 KYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDE 252
A+ ++ GMR+KM FE EDS F GTV V+ P W +S WR L+
Sbjct: 309 AVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ----- 363
Query: 253 PASITRPDRVSPWEIEPFVASATPNL 278
RVSPW +E + S+TP +
Sbjct: 364 -----NVKRVSPWLVE--LVSSTPAI 382
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDD-EGDMML 557
KV MQ VGR LDL+ + Y+ L L +MF + + +L + + Y D G +
Sbjct: 612 CKVFMQSEDVGRTLDLSAVASYEELYQRLADMFGVDRAELTS----HVFYRDGASGALKH 667
Query: 558 VGDDPWHEFCNMVKRIFI 575
GD+P+ EF +R+ I
Sbjct: 668 AGDEPFSEFTKTARRLTI 685
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 164/310 (52%), Gaps = 27/310 (8%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPK-------VHSFSKVLTASDTS 52
+A+ +DEV+A+ L P SQ +P D A + V SF+K+LT SD +
Sbjct: 68 LADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDAN 127
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
GGFSV R A C PPLD P Q L D+HG EWRF+HI+RG PRRHL TTGWS
Sbjct: 128 NGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGWS 187
Query: 113 TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS---------SVISSQSMHLG 163
FV K+LVAGDT VF++ +G + VG+R AR +++ + S ++ +
Sbjct: 188 KFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTGRVTAE 247
Query: 164 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 221
+A A+ + A F V Y PRT + F++S E++ + GMR K+ E EDS
Sbjct: 248 AVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSSR 307
Query: 222 RR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 280
+ GTV + ++ WR L+V WDEP + +VSPW++E + P +
Sbjct: 308 MTWYQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKQVSPWQVE---LVSPPFALH 360
Query: 281 PVLAKNKRPR 290
V + NKR R
Sbjct: 361 TVFSPNKRLR 370
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 145/278 (52%), Gaps = 32/278 (11%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
MA+ +DEV+A+I L+P +P+ + RPK SF+K LT SD + GG
Sbjct: 78 MADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQDDRPKPASFAKTLTQSDANNGGG 137
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD + P Q +V +D+HG E++F+HI+RG PRRHLLTTGWS FV
Sbjct: 138 FSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRHLLTTGWSNFVN 197
Query: 117 SKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVL---------AT 167
K+L+AGD+ VFLR + GE+HVGVR R + S + G++ A
Sbjct: 198 QKKLLAGDSIVFLRSDGGEVHVGVR---RAKRVFCDEGHSGWDHYRGLMRGGNAGSGDAA 254
Query: 168 ASHAVATQTM------------FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 213
A V + + F V Y PR S +F + A+ ++ GMR+KM
Sbjct: 255 AKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVRAAMQVQWRPGMRFKMA 314
Query: 214 FEGEDSPE-RRFSGTVVGVEDFSP-HWKDSKWRSLKVQ 249
FE EDS F GTV G+ P W S WR L+V+
Sbjct: 315 FETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR 352
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 149/290 (51%), Gaps = 43/290 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPD-----PCPADSPRPKVHSFSKVLTASDTSTHG 55
MAE+ETDEV+A+I L P TP+ +D+ R K SF+K LT SD + G
Sbjct: 75 MAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNSR-KPLSFAKTLTQSDANNGG 133
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 115
GFSV + A P LD N + P Q L A D+HG W+F+HI+RG P RHLLTTGWSTFV
Sbjct: 134 GFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERHLLTTGWSTFV 193
Query: 116 TSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM---------PS-------------- 152
K+LVAGD+ VFLR EN ++ +G+R + ++ +M PS
Sbjct: 194 NQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNLTIPRGGFSAF 253
Query: 153 -----------SVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEA 199
S+I+ ++ + A+ F V + P+ T +F + ++ A
Sbjct: 254 LRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTTPEFFVKASRVKAA 313
Query: 200 VNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKV 248
+ + GMR+KM FE ED F GT+ V+ P W DS WR L+V
Sbjct: 314 LQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRMLQV 363
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 152/304 (50%), Gaps = 37/304 (12%)
Query: 2 AEQETDEVYAQITLLP-EPSQNEPTTPDP---CP-ADSPRPKVHSFSKVLTASDTSTHGG 56
A+ +DEV ++ L P P Q+ P C + R ++ F+KVLT+SD + GG
Sbjct: 62 ADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTSSDANNGGG 121
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTTGWS FV
Sbjct: 122 FSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 181
Query: 117 SKRLVAGDTFVFLRGENGELHVGVR-----------------------CLARQQSSMPSS 153
+K+L+AGD +F R + ++ VG+R C ++ S S
Sbjct: 182 NKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVEEKRSGDRS 241
Query: 154 VISSQSMHLG-----VLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAV 206
++G +ATA+ A F V Y PR TS+F+I K ++N ++
Sbjct: 242 TDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVNNSLNYQWYP 301
Query: 207 GMRYKMRFEGEDSPERR-FSGTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDRVSP 264
G+R KM E EDS + + + GTV WK S WR L+V W+E ++ VSP
Sbjct: 302 GIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQSAKFVSP 361
Query: 265 WEIE 268
WE+E
Sbjct: 362 WEVE 365
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 149/304 (49%), Gaps = 36/304 (11%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPC--PADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ TDEV+A +TL P +Q++ P + KV +F+KVLTASD + GGFS
Sbjct: 69 LADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFAKVLTASDANNGGGFS 128
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V R A PPLD P Q+L D+HG W F+HI+RG PRRHLLTTGWS FV SK
Sbjct: 129 VPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLTTGWSKFVNSK 188
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLAT----------- 167
+L+ GD+ VF+R E+ +GVR S SS + G
Sbjct: 189 KLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVKKEDGGEKFRR 248
Query: 168 ----------ASHAVATQTM---FVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKM 212
S A+ + F V Y P S+F++ + N + G R KM
Sbjct: 249 VGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVVRAEDVEASTNVYWTPGTRVKM 308
Query: 213 RFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFV 271
E EDS F G V S ++++ W+ L++ WDEP + RV+PW++E
Sbjct: 309 AMETEDSSRITWFQGIV------SATFQET-WKQLQITWDEPEILQNLKRVNPWQVEAVT 361
Query: 272 ASAT 275
AS+T
Sbjct: 362 ASST 365
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 153/317 (48%), Gaps = 41/317 (12%)
Query: 1 MAEQETDEVYAQITLLP------EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 54
+A+ TDEV+A++ L P A + V SFSKVLTASD +
Sbjct: 76 LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A PPL+ P Q L+ D+HG+ W F+HI+RG PRRHLLTTGWSTF
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTF 195
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLAR-------QQSSMPSSVISSQSMHL----- 162
V +K+LVAGD VF++ G L VG+R R + M V +
Sbjct: 196 VNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEEEEEEE 255
Query: 163 ------------GVLATASHAVATQTM-----FVVYYKP--RTSQFIISLNKYLEAVNNK 203
G L+ A A + F V Y P R S+F++ EA+
Sbjct: 256 EEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTEAVNEAMKVA 315
Query: 204 FAVGMRYKMRFEGEDSPERRFS-GTVVGVE-DFSPHWKDSKWRSLKVQWDEPASITRPDR 261
++ G+R K+ E +DS + GTV V + W+ S WR L+V WDEP +
Sbjct: 316 WSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEGLQIAKW 375
Query: 262 VSPWEIEPFVASATPNL 278
VSPW++E + S TP L
Sbjct: 376 VSPWQVE--LVSTTPAL 390
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 159/333 (47%), Gaps = 66/333 (19%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPD--------PCPADSPRPKVHSFSKVLTASDTS 52
+A+Q+TDEV+A+I L P E T + D KV SF K+LT+SD +
Sbjct: 71 LADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDAN 130
Query: 53 THGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 112
GGFSV R A PPL+ P Q L+ DL G +W F+HI+RG PRRHLLTTGWS
Sbjct: 131 NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190
Query: 113 TFVTSKRLVAGDTFVFL-RGENGELHVGVRCLARQ---------QSSMPSSVISSQSMHL 162
FV K+LVAGD+ VF+ R N EL +GVR AR +S++ +V + + +
Sbjct: 191 KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEVGSI 250
Query: 163 GVLATASHAVAT------------QTM-FVVYYKPR--TSQFIISLNKYLEAVNNKFAVG 207
+ +S Q M F V Y PR +S F++ EA++ + G
Sbjct: 251 EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGG 310
Query: 208 MRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKWRSL------------------ 246
MR KM E EDS + F GTV V D P W+ S WR L
Sbjct: 311 MRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLWRMLQTWSYLQDTKMRSLIVTF 369
Query: 247 -----------KVQWDEPASITRPDRVSPWEIE 268
KV WDEP + RVSPW++E
Sbjct: 370 FSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 80 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVG 139
+ ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VFLR ENG+L VG
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 140 VRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYL 197
+R R + + + + + A+ A F V Y PR S +F + +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVR 193
Query: 198 EAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPAS 255
AV ++ GMR+KM FE EDS F GT+ V+ P W +S WR L+V WDEP
Sbjct: 194 SAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDL 253
Query: 256 ITRPDRVSPWEIE 268
+ RVSPW +E
Sbjct: 254 LQNVKRVSPWLVE 266
>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 159/285 (55%), Gaps = 62/285 (21%)
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSE--NIPKSVM 58
Query: 284 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 344 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 401
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 402 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 456
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 108/175 (61%), Gaps = 28/175 (16%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 28 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 62
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 63 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 119
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKL 590
GQL R KW +V+TDDEGDMML GDDPW+EFC M K+IFI SS +VKKM+ K+
Sbjct: 120 GQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMTTKLKI 174
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 163/321 (50%), Gaps = 41/321 (12%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ TDEV+A++ L P Q P D D K SF K LT SD++ GGFSV
Sbjct: 71 LADPHTDEVFAKLLLSPVTEGQEFPEVVDE--EDDGGDKFVSFVKTLTKSDSNNGGGFSV 128
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD+N P+Q+L D+H W+F H++RG+P+RHL TTGW+ FV +K+
Sbjct: 129 PRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPFVNTKK 188
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVIS-----------------SQSMHL 162
LVAGD+ VF++ G++ VG+R + ++ +V + S+
Sbjct: 189 LVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFSRGGRR 248
Query: 163 GVLATASHAVATQ-----TMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFE 215
G+L + A + F V Y PR + F++ N +A+ +A GMR K+ +
Sbjct: 249 GMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWASGMRVKLPLK 308
Query: 216 GEDSPERRFS-----GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPF 270
++S + + GT+ V WR L+V WDE + +RV+PW++E
Sbjct: 309 IDESSNSKMTFFQPQGTISNVSSV------PNWRMLQVNWDELEILQNQNRVNPWQVE-- 360
Query: 271 VASATPNLVQPVLAKNKRPRL 291
+ S TP + P L+ K+PRL
Sbjct: 361 LISHTPAVHLPFLS-TKKPRL 380
>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 284 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 344 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 401
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 402 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 456
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVR 141
V K+L+AGD+ VFLR E GEL VG+R
Sbjct: 185 VNQKKLIAGDSIVFLRSETGELCVGIR 211
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 175 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 231
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAV 346
Query: 232 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 289
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 290 RLSMEVP-PLDLP 301
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+SGTV+GV+D SPHWKDSKWR L+V WDEPA+I+RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 284 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 344 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 401
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 402 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 456
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 158/285 (55%), Gaps = 62/285 (21%)
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+SGTV+GV+D SPHWKDSKWR L+V WDEPASI+RP++VSPWE EPFV+S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSE--NIPKSVM 58
Query: 284 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRPVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 344 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 401
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 402 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 456
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 230
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 157/285 (55%), Gaps = 62/285 (21%)
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+SGTV+GV+D SPHWKDSKWR L+V WDEPAS +RP++VSPWEIEPFV S N+ + V+
Sbjct: 1 YSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSE--NVPKSVM 58
Query: 284 AKNKRPRLSMEVPPLDLPSAASAPWSARLAQSHNLTQLSVTAEDKRIDNHVAWHHKHSDF 343
KNKRPR EV LD+ AS WS+ L Q H Q +T++
Sbjct: 59 LKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQ----------------- 101
Query: 344 SSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPN--N 401
+SP QQ ++A +D K S W ++ +S + +K + N
Sbjct: 102 ----------------WSSP-----QQCHRDANEDAKK-SDW-LNNSYSVSNVAKDSTLN 138
Query: 402 DTLLEQVETGRKTETGTSCRLFGIELINHATS-----SAPSEKVPVSSLTTEGHIISTIS 456
D ++ VE +K ET + RLFGI+L++ + + +AP + +S T + H
Sbjct: 139 DQMVSPVEQ-KKPETTANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSH------ 191
Query: 457 AAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTK 501
SD KS+I+K +EKKQE + SPKE QSKQS +S RSRTK
Sbjct: 192 ----SDPKSEISKVSEEKKQEPAEGSPKEVQSKQS--SSTRSRTK 230
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVR 141
V K+L+AGD+ VFLR E G+L VG+R
Sbjct: 185 VNQKKLIAGDSIVFLRSETGDLCVGIR 211
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 66/130 (50%), Gaps = 13/130 (10%)
Query: 178 FVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDF 234
F V Y PR S +F + + A+ ++ GMR+KM FE EDS F GTV V+
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVA 349
Query: 235 SP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRPRLS 292
P W +S WR L+V WDEP + RVSPW +E + S P + + P PR
Sbjct: 350 DPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SPRKK 402
Query: 293 MEVP-PLDLP 301
+ +P P D P
Sbjct: 403 LRIPQPFDFP 412
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 561 DPWHEFCNMVKRIFI 575
+P+ +F KR+ I
Sbjct: 652 EPFSDFMRATKRLTI 666
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 150/316 (47%), Gaps = 46/316 (14%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTP---------DPCPADSPRPKVHSFSKVLTASDT 51
+A+ TDEV+A + L +P E TP D D+ KV +F+K+LT SD
Sbjct: 73 LADPITDEVFAHLVL--QPVTQEQFTPTNYSRFGRYDGDVDDNN--KVTTFAKILTPSDA 128
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A PPLD P Q+L D+HG W F+HI+RG PRRHLLTTGW
Sbjct: 129 NNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLLTTGW 188
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLAR 145
S FV SK+L+AGD+ VF++ E+ +GVR +A+
Sbjct: 189 SKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQSSVAK 248
Query: 146 QQSSMPSSVI---SSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAV 200
+ + + A + A F V Y P S+F++ ++
Sbjct: 249 EDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVVRAEDVESSM 308
Query: 201 NNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRP 259
+ + G R KM E EDS F G V + W+ S W+ L++ WDEP +
Sbjct: 309 SVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQNV 368
Query: 260 DRVSPWEIEPFVASAT 275
RV+PW++E VA+AT
Sbjct: 369 KRVNPWQVE-IVANAT 383
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 96/140 (68%), Gaps = 6/140 (4%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
E +DE Y +ITL+P+ +Q T + + RP V+SF+KVLTASDTS G FSV
Sbjct: 89 VENNSDETYVEITLMPDTTQVVIPTEN---ENQFRPIVNSFTKVLTASDTSAQGEFSVPC 145
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
KHA ECLPPLDM+Q P QEL+A DLHG +WRFKH +R PR TTGW+ F TSK+LV
Sbjct: 146 KHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAFTTSKKLV 202
Query: 122 AGDTFVFLRGENGELHVGVR 141
GD VF RGE GEL VG+R
Sbjct: 203 VGDVIVFARGETGELRVGIR 222
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 100/132 (75%), Gaps = 10/132 (7%)
Query: 177 MFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF 234
MF VYYKPRTS +FII ++Y+E+V N +++GMR++MRFEGE++PE+RF+GT+VG E+
Sbjct: 1 MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60
Query: 235 SPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL--AKNKRPRLS 292
P W DS WR LKV+WDEP++I RPDRVSPW+IEP AS+ P V P++ ++ KRPR
Sbjct: 61 DPLWPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEP--ASSPP--VNPLVHSSRAKRPR-- 114
Query: 293 MEVPPLDLPSAA 304
VPP L S+
Sbjct: 115 QNVPPPSLESSV 126
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 413 KTETGTSCRLFGIELINHATSSAPSE-KVPVSSLTTEGHIISTISAAADSD--------- 462
KT G+ ++FG ++ TS +P + P+ ++ + H++ T +A ++
Sbjct: 338 KTREGSGFKIFGFQV--DTTSPSPVQLSSPLPAI--QEHVLQTRPSAPVNELQPVQIECL 393
Query: 463 --GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVG 520
G A E Q+ Q S K+ QSK S S RS TKV QGVA+GR++DL+
Sbjct: 394 PEGSVSTAGTATENIQQAPQSS-KDIQSK-SQGASTRSCTKVHKQGVALGRSVDLSKFTD 451
Query: 521 YDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQ 579
Y L EL++MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + +
Sbjct: 452 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKE 511
Query: 580 DVKKMSPGSKLP 591
+V+KM+ S P
Sbjct: 512 EVQKMNSKSAAP 523
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 144/311 (46%), Gaps = 49/311 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------PKVHSFSKVLTAS 49
+A+ TDEV+A + L P Q P + R KV +F+K+LT S
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNNKVTTFAKILTPS 126
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CL 143
GWS FV SK+L+AGD+ VF+R E+ +GVR +
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 144 ARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFIISLNKYLE 198
A++ P + A+ A+Q + F V + P S+F++
Sbjct: 247 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 306
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASIT 257
+++ + G R KM E EDS F G V + W+ S W+ L++ WDEP +
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 258 RPDRVSPWEIE 268
RV+PW++E
Sbjct: 367 NVKRVNPWQVE 377
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 144/311 (46%), Gaps = 49/311 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------PKVHSFSKVLTAS 49
+A+ TDEV+A + L P Q P + R KV +F+K+LT S
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNNKVTTFAKILTPS 126
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CL 143
GWS FV SK+L+AGD+ VF+R E+ +GVR +
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 144 ARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFIISLNKYLE 198
A++ P + A+ A+Q + F V + P S+F++
Sbjct: 247 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 306
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASIT 257
+++ + G R KM E EDS F G V + W+ S W+ L++ WDEP +
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 258 RPDRVSPWEIE 268
RV+PW++E
Sbjct: 367 NVKRVNPWQVE 377
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 146/307 (47%), Gaps = 41/307 (13%)
Query: 1 MAEQETDEVYAQITLLPEPSQN-EPTTP------DPCPADSPRPKVHSFSKVLTASDTST 53
+A+ TDEV+A + L P Q PT D D+ KV +F+K+LT SD +
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNN--KVTTFAKILTPSDANN 130
Query: 54 HGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 113
GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTTGWS
Sbjct: 131 GGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSK 190
Query: 114 FVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CLARQQ 147
FV SK+L+AGD+ VF+R E+ +GVR +A++
Sbjct: 191 FVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKED 250
Query: 148 SSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFIISLNKYLEAVNN 202
P + A+ A+Q + F V + P S+F++ +++
Sbjct: 251 DGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSM 310
Query: 203 KFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR 261
+ G R KM E EDS F G V + W+ S W+ L++ WDEP + R
Sbjct: 311 YWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQNVKR 370
Query: 262 VSPWEIE 268
V+PW++E
Sbjct: 371 VNPWQVE 377
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVH------SFSKVLTASDTSTH 54
+A+ ETDEVY++ITLLP P + D +P P V+ SF+K LT SD +
Sbjct: 65 LADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSDANNG 124
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD P Q ++AKD+HG +F+HI+RG PRRHLLTTGWSTF
Sbjct: 125 GGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTTGWSTF 184
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVR 141
V K+L+AGD+ VFLR E GEL VG+R
Sbjct: 185 VNQKKLIAGDSIVFLRSETGELCVGIR 211
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 68/133 (51%), Gaps = 14/133 (10%)
Query: 175 QTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGV 231
Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS F GTV V
Sbjct: 288 QAFEVVYY-PRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAV 346
Query: 232 EDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL-VQPVLAKNKRP 289
+ P W +S WR L+V WDEP + RVSPW +E + S P + + P P
Sbjct: 347 QVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE--LVSNMPAIHLSPF-----SP 399
Query: 290 RLSMEVP-PLDLP 301
R + +P P D P
Sbjct: 400 RKKLRIPQPFDFP 412
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ + Y L +L EMF I+ + T +VY D G +GD
Sbjct: 594 KVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEERSDLLT--HVVYRDANGVTKRIGD 651
Query: 561 DPWHEFCNMVKRIFI---CSSQDVKK 583
+P+ +F KR+ I S +V+K
Sbjct: 652 EPFSDFMRATKRLTIKMDISGDNVRK 677
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 81/99 (81%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
AE ETDEVYAQ+TLLPEP Q+E T+PDP + VHSF K LTASDTSTHGGFSVLR
Sbjct: 84 AEPETDEVYAQVTLLPEPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDTSTHGGFSVLR 143
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
+HA ECLPPLDM+Q+ P QELVAKDLHG EW F+HIFRG
Sbjct: 144 RHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
Query: 130 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQ- 188
RG++GEL +GVR + ++ + SQ +LG LA +HAV+T++MF ++Y PR SQ
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71
Query: 189 -FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLK 247
FI+ K+ ++++ F+VG R+KMR+E ED+ ERR++G + G D P W+ SKW+ L
Sbjct: 72 EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADPRWRGSKWKCLL 131
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPPLDLPSAASAP 307
V+WD+ RP+R+SPWEIE A++ +L P +K +P L P +P P
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIELTSAASGSHLAAPT-SKRMKPYLPHANPEYTVPYGGGRP 190
Query: 308 WSARLAQSHNLTQ 320
A AQ + Q
Sbjct: 191 DFAESAQLRKVLQ 203
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+A++ETDEV+A + L PE +E P+ SP K SF+K LT SD + GGFSV
Sbjct: 97 LADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPE-KPASFAKTLTQSDANNGGGFSVP 155
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 156 RYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNHKKL 215
Query: 121 VAGDTFVFLRGENGELHVGVR 141
VAGD VFLR +GEL VGVR
Sbjct: 216 VAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 164 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 222
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 223 R-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 280
F GT+ V+ P W S WR L+V WDEP + RVSPW++E + S P
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--LVSTLP---- 424
Query: 281 PVLAKNKRPRLSMEVPPLDLP 301
M++PP LP
Sbjct: 425 ------------MQLPPFSLP 433
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 459 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 518
DS D+ KKQ V S K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GDSGHGGDVGGSKWLKKQASVLSSEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
YD L +L +F + + +VY D EG + G +P+
Sbjct: 692 GSYDELYKQLAAVFCVD---VAKISGRVVYKDSEGSTIHTGGEPY 733
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRP-KVHSFSKVLTASDTSTHGGFSV 59
+A++ETDEV+A + L PE +E D A SP P K SF+K LT SD + GGFSV
Sbjct: 97 LADKETDEVFASLRLHPESGSDEDN--DRAAALSPSPEKPASFAKTLTQSDANNGGGFSV 154
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R A P LD + P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+
Sbjct: 155 PRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNHKK 214
Query: 120 LVAGDTFVFLRGENGELHVGVR 141
LVAGD VFLR +GEL VGVR
Sbjct: 215 LVAGDAIVFLRSNSGELCVGVR 236
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 21/141 (14%)
Query: 164 VLATASHAVATQTMFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER 222
VL A+ A + + VVYY + T++F + A+++ + GMR+KM FE EDS
Sbjct: 311 VLDAATLAASGKAFEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRI 370
Query: 223 R-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 280
F GT+ V+ P W S WR L+V WDEP + RVSPW++E + S P
Sbjct: 371 SWFMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVE--LVSTLP---- 424
Query: 281 PVLAKNKRPRLSMEVPPLDLP 301
M++PP LP
Sbjct: 425 ------------MQLPPFSLP 433
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
Query: 459 ADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTL 518
+S D+ KKQ V K+ + + S S+ +V M+ V R LDL++
Sbjct: 632 GESGHGGDVGGSKWLKKQASVLSWEKKDRLEGSSSDEESSQCRVFMESGDVKRTLDLSSF 691
Query: 519 VGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICS- 577
YD L +L +F + + +VY D EG + G +P+ F V+R+ I +
Sbjct: 692 GSYDELYKQLATVFCVD---MAKISGRVVYKDSEGSTIHTGGEPYANFVKSVRRLTILAD 748
Query: 578 SQD 580
+QD
Sbjct: 749 TQD 751
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 141/287 (49%), Gaps = 23/287 (8%)
Query: 1 MAEQETDEVYAQITLLP-EPSQNEPTT--------PDPCPADSPRPKVHSFSKVLTASDT 51
+A+ TDEV+A + L P P P+ D ++S + KV +F+K+LT SD
Sbjct: 73 LADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNSNSNKNKVVTFAKILTPSDA 132
Query: 52 STHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
+ GGFSV R A PPLD + P Q+L D+HG W F+HI+RG PRRHLLTTGW
Sbjct: 133 NNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGTPRRHLLTTGW 192
Query: 112 STFVTSKRLVAGDTFVFLRGENGELHVGVR---CLARQQSSMPSSVISSQSMHLGVLA-- 166
S FV K+L+AGD+ VF+R E+ +GVR + + +G L
Sbjct: 193 SKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYYGGGKKGFRRIGMGKLTAE 252
Query: 167 ----TASHAVATQTMFVVYYKPRT-SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 221
+ AV VVYY S F++ + ++ G R KM E EDS
Sbjct: 253 AVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAGYWSPGTRVKMAMETEDSSR 312
Query: 222 RRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ VV S + W+ L++ WDEP + RV+PW++E
Sbjct: 313 VTWFQGVVS----STFQETGLWKQLQITWDEPEILQNLKRVNPWQVE 355
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 129/258 (50%), Gaps = 49/258 (18%)
Query: 82 LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV K+LVAGD+ VF+R ENG+L VG+R
Sbjct: 98 VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157
Query: 142 CLARQQSSMPSSVISSQ---------------SMHLG----------------------- 163
+ P + SM L
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217
Query: 164 -VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSP 220
V+ A+ AV+ Q VVYY PR S +F + A+ ++ GMR+KM FE EDS
Sbjct: 218 EVVEAANLAVSGQPFEVVYY-PRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSS 276
Query: 221 ERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
F GTV V+ P W +S WR L+V WDEP + RVSPW +E + S P +
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI 334
Query: 279 VQPVLAKNKRPRLSMEVP 296
LA PR + VP
Sbjct: 335 ---HLAPFSPPRKKLCVP 349
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-KGQLHTRTKWEIVYTDDEGDMMLV 558
KV MQ VGR LDL+ + Y+ L L +MF I K +L + + Y D G +
Sbjct: 547 CKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMS----HVFYRDAAGALKHT 602
Query: 559 GDDPWHEFCNMVKRIFICS 577
GD+P+ EF +R+ I +
Sbjct: 603 GDEPFSEFTKTARRLNILT 621
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 144/318 (45%), Gaps = 56/318 (17%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPR-----------PKVHSFSKVLTAS 49
+A+ TDEV+A + L P Q P + R KV +F+K+LT S
Sbjct: 70 LADPVTDEVFAHLILQPMTQQQF------TPTNYSRFGRFDGDVDDNNKVTTFAKILTPS 123
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A P L+ P Q+L D+HG W F+HI+RG PRRHLLTT
Sbjct: 124 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 183
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR--------------------------CL 143
GWS FV SK+L+AGD+ VF+R E+ +GVR +
Sbjct: 184 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 243
Query: 144 ARQQSSMPSSVISSQSMHLGVLATASHAV--ATQTM-FVVYYKPRT--SQFIISLNKYLE 198
A++ P + A+ A+Q + F V + P S+F++
Sbjct: 244 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 303
Query: 199 AVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSPHWKDSKWRSLKVQ-------W 250
+++ + G R KM E EDS F G V + W+ S W+ L+V W
Sbjct: 304 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITW 363
Query: 251 DEPASITRPDRVSPWEIE 268
DEP + RV+PW++E
Sbjct: 364 DEPEILQNVKRVNPWQVE 381
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 147/285 (51%), Gaps = 18/285 (6%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFS 58
+A+ +TDEV+A++ L P S +EP P+ + ++ K LT SD + G FS
Sbjct: 71 LADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDANNGGAFS 130
Query: 59 VLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 118
V + A PPLD+ P+Q L KD+H + W F+H +RG P+RHL+TT WS FV +K
Sbjct: 131 VPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKWSKFVDTK 190
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
+++ GD+ V ++ + + R+ ++ I+ +S V+ A A T
Sbjct: 191 KIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS----VMEAAELADKNMTFE 246
Query: 179 VVYYKPRTSQ---FIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR--FSGTVVGVED 233
V+YY P S F++ +A+ + GMR K + ++S +R F GTV + D
Sbjct: 247 VIYY-PTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQGTVSALSD 305
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
S H WR L+V WDE P +VSPW+IE + S TP L
Sbjct: 306 PSHH----PWRMLQVNWDESEVSQNPSQVSPWQIE--LISHTPAL 344
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 148/301 (49%), Gaps = 37/301 (12%)
Query: 2 AEQETDEVYAQITLLPEP-------SQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTH 54
A+ ET+EV+A+I+L P P + +PT+ D P ++ F+K LT SD +
Sbjct: 76 ADDETNEVFAKISLSPGPHRGPAAACRTDPTS------DCPPQELSYFTKELTQSDANNG 129
Query: 55 GGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 114
GGFSV R A P LD + + P Q+L +D G W+F+HI+RG PRRHLLTTGWS F
Sbjct: 130 GGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLTTGWSRF 189
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMP-----SSVISSQSMHLGVLA--- 166
V +K LVAGD VF+R NG+L VG+R R P + V Q A
Sbjct: 190 VNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPPPRNARARVP 249
Query: 167 -----TASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-FEGED 218
A+ A F V Y PR +FI+ ++ + ++ G + +M+ E ED
Sbjct: 250 PQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQVRMQVMEAED 309
Query: 219 SPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATP 276
+ RR V + + WR+L++ WD+ P S V+ W++E P
Sbjct: 310 T--RR----TVWADGHVKSLHQNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPPLP 363
Query: 277 N 277
N
Sbjct: 364 N 364
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 140/273 (51%), Gaps = 15/273 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
A+ TDE +A I+L+P P + P + P ++K LT SD + GGFSV R
Sbjct: 69 ADPSTDEPFATISLVPGPHR---ALGGGAPHHAVDPAFAHYAKQLTQSDANNGGGFSVPR 125
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
A P LD + P Q L +DL G W F+HI+RG PRRHLLTTGWS FV +K LV
Sbjct: 126 FCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSRFVNAKLLV 185
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSM-PSSVISSQSMHLGV--LATASHAVATQTMF 178
AGD VF+R +GEL GVR R S P+ + + + A+ A F
Sbjct: 186 AGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAARRAAQGAPF 245
Query: 179 VVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP 236
V Y PR +F++ + +A+ + + G + +M+F PE R S + GV
Sbjct: 246 TVTYYPRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFL---HPEDRRSEWINGVVRAVD 302
Query: 237 HWKDSKWRSLKVQWDEPASITRPDR-VSPWEIE 268
H S WR L++ WDE A + +R V+ W+++
Sbjct: 303 H---SIWRMLEIDWDESAPPSLKNRHVNAWQVQ 332
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 141/281 (50%), Gaps = 24/281 (8%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSF---SKVLTASDTSTHGGF 57
A+ +TDE +A ++L+P P + PD A + RP+ +F +K LT SD + GGF
Sbjct: 78 FADPKTDEPFATVSLVPGPHRA--PAPDLPHASARRPEPTAFRYYAKQLTQSDANNGGGF 135
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R A PPLD P Q L D G W F+HI+RG PRRHLLTTGWS FV +
Sbjct: 136 SVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKFVNA 195
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLAR-----QQSSMPSSVISSQSMHLGVLATASHAV 172
K LVAGD VF+R +GEL G+R R QQ + + + A
Sbjct: 196 KLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAVRLA 255
Query: 173 ATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR---FSGT 227
A F V Y PR +F++ + EA+ + G++ +M+F D+ ERR +G
Sbjct: 256 AEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKF--LDAEERRSEWINGV 313
Query: 228 VVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
V V+ + WR L++ W E + + V+ W++E
Sbjct: 314 VKAVD-------PNIWRMLEINWAESVAGSLNRYVNAWQVE 347
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 154/313 (49%), Gaps = 40/313 (12%)
Query: 2 AEQETDEVYAQITLLPEP-----SQNEPTTPDPCP------ADSP---RPK-VHSFSKVL 46
A+ +T+EV+A+I+L P P + + PDP +DSP +P+ + F+K L
Sbjct: 72 ADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELSYFTKEL 131
Query: 47 TASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHL 106
T SD + GGFSV R A P LD + P Q LV +D G W+F+HI+RG PRRHL
Sbjct: 132 TQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRGTPRRHL 191
Query: 107 LTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR--------------QQSSMPS 152
LTTGWS FV +K LVAGD VF+R NG+L VG+R R Q P
Sbjct: 192 LTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANANQDQQPP 251
Query: 153 SVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRY 210
+ + + A+ A F V Y PR +F++ ++ A+ ++ G
Sbjct: 252 PRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDEVERALATRWEPGTEV 311
Query: 211 KMR-FEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEI 267
+M+ E ED+ RR V + + WR+L++ WD+ P S+ V+ W++
Sbjct: 312 RMQVMEAEDT--RR----TVWADGHVKALHQNIWRALEIDWDDSSPLSLKLSRFVNAWQV 365
Query: 268 EPFVASATPNLVQ 280
+ PN V+
Sbjct: 366 QLVAYPPLPNTVR 378
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 3/143 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQN-EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
A+ +TDEVYAQ+TL P + E RP++ F K LTASDTSTHGGFSV
Sbjct: 113 ADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLTASDTSTHGGFSVP 172
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD + P QEL A+D+H W F+HI+RGQP+RHLLTTGWS FV+ KRL
Sbjct: 173 RRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 232
Query: 121 VAGDTFVFLR--GENGELHVGVR 141
AGD+ + +R ++ ++ +G+R
Sbjct: 233 FAGDSVIVVRRHCDSNQISLGMR 255
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 113/230 (49%), Gaps = 24/230 (10%)
Query: 363 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
P F+Q Q+F++A+ D + P++S NND LL +TE
Sbjct: 811 PSSNFNQHQMFKDALPDVEMEGVDPSNSCLF-----GINNDNLLG---FPIETEDLLINA 862
Query: 422 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 863 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 914
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 915 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 973
Query: 538 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 974 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 1023
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 176 TMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
++FV + +I + ++ ++ N+ ++GMR++M FE E+ RR+ GT+ G+ D
Sbjct: 224 SLFVSGKRLFAGDSVIVVRRHCDS--NQISLGMRFRMMFETEELGTRRYMGTITGISDLD 281
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPR 290
P V WDE A+ R +RVS WEIEP VA+ QP KRPR
Sbjct: 282 P-----------VGWDESAAGERRNRVSIWEIEP-VAAPFFLCPQPFFGV-KRPR 323
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQN----EPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG 56
+A+ ETDEV+A + ++P P+ + E +++ K SF+K LT SD + GG
Sbjct: 67 LADLETDEVFANVRMVPLPNSDLNFEEEGGFGSSGSENNMEKPASFAKTLTQSDANNGGG 126
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVT 116
FSV R A P LD P Q ++AKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 127 FSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 186
Query: 117 SKRLVAGDTFVFLRGENGELHVGVR 141
K+LVAGD+ VFLR +NG+L VG+R
Sbjct: 187 QKKLVAGDSIVFLRSKNGDLCVGIR 211
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 194/447 (43%), Gaps = 62/447 (13%)
Query: 164 VLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 221
V+ A+ A + Q VVYY PR S +F + + A+ ++ GMR+KM FE EDS
Sbjct: 278 VMEAAALAASGQPFEVVYY-PRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSR 336
Query: 222 RR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
F GT+ V+ P W +S WR L+V WDEP + RVSPW +E + S P ++
Sbjct: 337 ISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMP-VI 393
Query: 280 QPVLAKNKRPRLSMEVPP-LDLPSAASAPWSARLAQSHNL---TQLSVTAEDKRIDNHVA 335
Q L+ PR +P D P + P S+ + S+ L + + +++ + A
Sbjct: 394 Q--LSPFSPPRKKFRLPQHPDFPLDSQFPLSSSFS-SNTLRPSSPMCCLSDNTSVGIQGA 450
Query: 336 WHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAIDDNKNISAWPAHSGHSTPH 395
H + S+ + ++ Q + ++ F ++ ++ D+++ S+
Sbjct: 451 RHTQFGISLSDFHLNNKLQLGLVPSSFQQIDFHSRISNRSVTDHRDSSS----------- 499
Query: 396 PSKPNNDTLLEQVE-TGRKTETGTSCR-----LFGIELINH---ATSSAPSEKVPVSSLT 446
+N ++L+ E TG K E S + LFG ++ SS+ + P + +
Sbjct: 500 ----HNSSVLQNGEKTGPKLERSDSVKKHQFLLFGQPILTEQQITCSSSSDIRSPPTEKS 555
Query: 447 TEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKES--------QSKQSC-LTSNR 497
+ + + + G + FK+ QVSP +S Q Q+ L +
Sbjct: 556 SSDVNLERVKFLSHGSGST-----FKQ------QVSPNKSPGVGFPWYQGYQATELGLDI 604
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 557
KV M+ VGR L+L+ + Y+ L L MF G ++Y D G +
Sbjct: 605 GHCKVFMESEDVGRTLNLSVISSYEELYRRLANMF---GMEKPDILSHVLYQDATGAVKQ 661
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
GD P+ +F +R+ I + K+
Sbjct: 662 AGDKPFSDFIKTARRLTILTDSGSDKL 688
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 143/304 (47%), Gaps = 46/304 (15%)
Query: 1 MAEQETDEVYAQITLLP----EPSQNEPTTPDPCPADSPR------------------PK 38
MA+ +TD+VYA+I L+P EP + S R P+
Sbjct: 104 MADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDGDAGGGQQQQPR 163
Query: 39 VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIF 98
SF+K LT SD + GGFSV R A P LD + S P Q + A+D+HG EW F+HI+
Sbjct: 164 PLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVHGVEWTFRHIY 223
Query: 99 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 158
R PRR LL G +KR VF R G + GV +P+
Sbjct: 224 RSTPRRTLLNPG-CRLRRAKR-------VFCRRGGGGSNAGVAVAGPSDGKVPAE----- 270
Query: 159 SMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
V+ A A A Q VV+Y PR S +F++ E++ + G+R+KM FE
Sbjct: 271 ----DVVEAARLAAAGQPFEVVHY-PRASAPEFVVRAAAVKESMQAPWCPGLRFKMAFET 325
Query: 217 ED-SPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
ED S F GT+ GVE P W S WR L+V WDEP + +RV PW +E + S+
Sbjct: 326 EDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVCPWRVE--LVSS 383
Query: 275 TPNL 278
P L
Sbjct: 384 MPKL 387
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 488 SKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIV 547
S S + KV ++ +GR LDL+ L ++ L L F I + + +V
Sbjct: 600 SSLSAFALEPGQCKVFVESDTLGRNLDLSALSSFEELCARLSSFFGIN---NADLRSHMV 656
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
Y G++ VGD+P+ F +RI I
Sbjct: 657 YRTIAGEVKHVGDEPFSVFVKSARRITI 684
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+L + KW IV+TDDEGD MLVGDDPW+EFC M K++FI
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 192
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 153/307 (49%), Gaps = 27/307 (8%)
Query: 1 MAEQETDEVYAQITLLP---EPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
+A+ +DEV+A+ L P +P N+ T V SFSK+LT SD + GGF
Sbjct: 68 LADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDRENGVVSFSKILTPSDANNGGGF 127
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
SV R A PPLD P+ + +HI+RG PRRHL TTGWS FV
Sbjct: 128 SVPRYCADSWFPPLDFXXXXPSSPVATSR---RRVALRHIYRGTPRRHLFTTGWSKFVNH 184
Query: 118 KRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPS-----------SVISSQSMHLGVLA 166
K+LVAGDT VF++ +G + VG+R AR +++ + S ++ + +A
Sbjct: 185 KKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSATGRVTAEAVA 244
Query: 167 TASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR- 223
A+ + A F V Y PRT + F++S E++ + GMR K+ E EDS
Sbjct: 245 AAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKIAMETEDSSRMTW 304
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
F GTV + ++ WR L+V WDEP + RVSPW++E + P + V
Sbjct: 305 FQGTVSS----ACASENGPWRMLQVNWDEPEVLQNAKRVSPWQVE---LVSLPFALHTVY 357
Query: 284 AKNKRPR 290
+ NKR R
Sbjct: 358 SPNKRLR 364
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 108/167 (64%), Gaps = 6/167 (3%)
Query: 127 VFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT 186
+R +N +L +G+R R Q+ MPSSV+SS SMH+G+LA A+HA +T + F ++Y PR
Sbjct: 4 CLVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRA 63
Query: 187 S--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDF-SPHWKDSK 242
S +F+I L KY++AV + + +VGMR++M FE E+S RR+ GT+ G+ D S W +S
Sbjct: 64 SPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSH 123
Query: 243 WRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRP 289
WRS+KV WDE + R RVS WEIEP + P P + KRP
Sbjct: 124 WRSVKVGWDESTAGDRQPRVSLWEIEPL--TTFPTYTSPFPLRLKRP 168
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWH 564
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW
Sbjct: 575 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQ 631
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 93/156 (59%), Gaps = 11/156 (7%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTT-PDPC--------PADSPRPKVHSFSKVLTAS 49
+A+ TDEV+ ++ L+P P N P + +PC D K+ +FSK+LT S
Sbjct: 60 LADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFSKILTPS 119
Query: 50 DTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTT 109
D + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPRRHLLTT 179
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 145
GWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 180 GWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
Query: 1 MAEQETDEVYAQITLLP-------------EPSQNEPTTPDPCPADSPRPKVHSFSKVLT 47
+A+ TDEV+ ++ LLP EPS++E + D K+ +F+K+LT
Sbjct: 61 LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVND--VDDDENKILAFAKILT 118
Query: 48 ASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL 107
SD + GGFSV R A PPL+ P Q L D+HG W F+HI+RG PRRHLL
Sbjct: 119 PSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHLL 178
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLAR 145
TTGWS FV +K+L+AGD+ VF+R GE+ +GVR R
Sbjct: 179 TTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 143/291 (49%), Gaps = 44/291 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
MAE +TD++YA+I L+P L + T G ++L
Sbjct: 88 MAEPDTDDIYAKIRLVP----------------------------LRPWEPVTDVGDALL 119
Query: 61 RKHATECLPPLDMNQSTPTQEL-VAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
+ + + + L AK L +W F+H++RG P RHL+T GWS FV +K+
Sbjct: 120 GEGSRGGDGDGQQRRRRRPRPLSFAKTLTQSDWTFRHVYRGNPPRHLITAGWSNFVHNKK 179
Query: 120 LVAGDTFVFLRGENGELHVGVRCLAR----QQSSMPSSVISSQSMHL----GVLATASHA 171
L+ GD+ VF+R E+G++H+G+R R + + ++ S V+ A A
Sbjct: 180 LLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKVPAEDVVEAARLA 239
Query: 172 VATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGED-SPERRFSGTV 228
A Q VV+Y PR S +F + + E++ + + G+R+KM FE ED S F GT+
Sbjct: 240 AAGQPFEVVHY-PRASAPEFCVRADAVKESMRSPWCPGLRFKMAFETEDLSRISWFMGTI 298
Query: 229 VGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
GVE P W S WR L+V WDEP + RV PW +E + S+ PNL
Sbjct: 299 AGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVE--LVSSMPNL 347
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMML 557
+ KV ++ +GR LDL+ L + L L MF I R+ +VY G++
Sbjct: 532 GQCKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAELRS--HMVYRTISGEVKH 589
Query: 558 VGDDPWHEFCNMVKRIFI 575
+GD+P+ F +RI I
Sbjct: 590 IGDEPFSVFVKSARRITI 607
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+L + KW IV+TDDEGD MLVGDDPW+EFC M K
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAK 188
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 22/240 (9%)
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
++K LT SD + GGFSV R A P L+++ P Q L DL G W F+HI+RG
Sbjct: 128 YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGT 187
Query: 102 PRRHLLTTGWSTFVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISS 157
PRRHLLTTGWS FV +K+LVAGDT VF+ +L VGVR AR S+ +
Sbjct: 188 PRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNAR 245
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-F 214
+ + A A Q F V Y PR +F++ + + + + GM+ + +
Sbjct: 246 GRVQPQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVM 305
Query: 215 EGEDSPERRFS---GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 269
E ED+ RR + GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 306 EAEDT--RRLAWLNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 357
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 22/240 (9%)
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
++K LT SD + GGFSV R A P L+++ P Q L DL G W F+HI+RG
Sbjct: 124 YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGT 183
Query: 102 PRRHLLTTGWSTFVTSKRLVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISS 157
PRRHLLTTGWS FV +K+LVAGDT VF+ +L VGVR AR S+ +
Sbjct: 184 PRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNAR 241
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMR-F 214
+ + A A Q F V Y PR +F++ + + + + GM+ + +
Sbjct: 242 GRVQPQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVM 301
Query: 215 EGEDSPERRFS---GTVVGVEDFSPHWKDSKWRSLKVQWD-EPASITRPDR-VSPWEIEP 269
E ED+ RR + GT+ + WR+L+V+WD AS + +R V+PW+++P
Sbjct: 302 EAEDT--RRLAWLNGTLTNLR------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQP 353
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 94/154 (61%), Gaps = 24/154 (15%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMV 570
+L + KW IV+TDDEGD MLVGDDPW+EFC M
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMA 187
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 111/190 (58%), Gaps = 13/190 (6%)
Query: 405 LEQVETGRKTETGTS-CRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDG 463
+ + T +K E+ TS CRLFGIE I A S PV+++ + G A D
Sbjct: 460 INKAPTEKKQESATSGCRLFGIE-IGSAVS-------PVATVASVGQ---DQPPALSVDV 508
Query: 464 KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDH 523
+SD + + V+ E +S RS TKV MQG+AVGRA+DLT L GY
Sbjct: 509 ESDQLSQPSNANKTDAPVASSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYAD 568
Query: 524 LIDELEEMFDIKGQLHTR-TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
L +LEEMFDI+G+L KW+++YTDDE D MLVGDDPW+EF MVKRI+I S ++ K
Sbjct: 569 LHRKLEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAK 628
Query: 583 KMSPGSKLPM 592
++ +K P+
Sbjct: 629 SLTRKAKPPV 638
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA---DSPRPKVHSFSKVLTASDTSTHGGF 57
MA ETDEVYA++ L+P D + K SF+K LT SD + GGF
Sbjct: 48 MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQSFAKTLTQSDANNGGGF 107
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
S R A P +D + + P Q + KD+HG +W F+H++RG P+RHLLTTGWS FV+
Sbjct: 108 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 167
Query: 118 KRLVAGDTFVFLRGENGELHVGV 140
K+L +GD+ VFLR ENGEL VG+
Sbjct: 168 KKLASGDSVVFLRSENGELRVGI 190
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 138/255 (54%), Gaps = 31/255 (12%)
Query: 354 QSDGEW---LTSP-RVKFSQQLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQ-V 408
+S G W L SP + FS ++ N S ++G + P+ + + L E+ V
Sbjct: 164 ESQGNWFVSLISPSQADFSGTHAPGKLERNPTRSIGTGNTGMAVQQPNLLSREMLEEKGV 223
Query: 409 ETGRKTETGTSCRLFGIELINHATSSAPSE----------KVPVSSLT------TEGHII 452
+G ++ C+LFG LI ++ PS V V ++T +E
Sbjct: 224 LSGTRS---ADCKLFGFHLIENSVVGEPSTLRGLAAGEDIHVSVPNITVHEPQSSESDQH 280
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRA 512
S S+ A D + I E K Q S KE+ ++ S RS TKV QG A+GRA
Sbjct: 281 SEPSSIAKMDMPAAIIDEEKSS-----QKSSKETHNRPQS-NSTRSCTKVHKQGSALGRA 334
Query: 513 LDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
+DLT GY LI ELE+MF+I+G+L K W++VYTD+EGDMMLVGDDPW EFC++V+
Sbjct: 335 VDLTKFEGYTELIRELEQMFNIEGELEDPNKGWQVVYTDNEGDMMLVGDDPWQEFCSIVR 394
Query: 572 RIFICSSQDVKKMSP 586
+I+I + ++V+KM+P
Sbjct: 395 KIYIYTREEVEKMTP 409
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 107/179 (59%), Gaps = 11/179 (6%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
MFD G+L +K W +VYTD EGDMMLVGDDPW+EFC+MV +IF+ + ++V++M+PG+
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 338
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 103/177 (58%), Gaps = 26/177 (14%)
Query: 394 PHPSKPNNDTLLEQVETGRKTE--TGTSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGH 450
P + +N ++ V + TE +SCRLFG +L + A+++ P +K
Sbjct: 31 PATERNSNKSVFSSVLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDK----------Q 80
Query: 451 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVG 510
+IS S +DS K + SPKE + + TS RSR KVQMQG AVG
Sbjct: 81 LISVDSNISDSTTKC---------QDPNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVG 127
Query: 511 RALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
RA+DLT L YD LI ELE+MF+I+G+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 128 RAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 114/188 (60%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S++ ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K + S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTKTN---SSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 581 VKKMSPGS 588
V+KM+PG+
Sbjct: 413 VRKMNPGT 420
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 74/104 (71%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI
Sbjct: 8 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHI 67
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
+RG PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 68 YRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 111
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 130 bits (327), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 93/151 (61%), Gaps = 24/151 (15%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
+L + KW IV+TDDEGD MLVGDDPW+EFC
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEFC 184
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 129 bits (325), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 103 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 137
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 138 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 194
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 195 GQLLARDKWIVVFTDDEGDMMLAGDDPW 222
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 248 VQWDEPASITRPDRVSPWEIEPFVASA 274
VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 VQWDEPTTVQRPDKVSPWEIEPFLATS 27
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 107 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 141
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 142 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 198
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 199 GQLLARDKWIVVFTDDEGDMMLAGDDPW 226
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 244 RSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
RSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 RSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 31
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 245 SLKVQWDEPASITRPDRVSPWEIEPFVASA 274
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 105 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 139
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 140 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 196
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 197 GQLLARDKWIVVFTDDEGDMMLAGDDPW 224
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 27/29 (93%)
Query: 246 LKVQWDEPASITRPDRVSPWEIEPFVASA 274
L+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 LQVQWDEPTTVQRPDKVSPWEIEPFLATS 29
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 245 SLKVQWDEPASITRPDRVSPWEIEPFVASA 274
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 112/200 (56%), Gaps = 21/200 (10%)
Query: 394 PHPSKPNNDTLLEQVETGRKTETG---TSCRLFGIELINHATSSAPSEKVPVSSLTTE-G 449
P P D ++ G+ T + CRLFG L +E+ P+S+ +
Sbjct: 245 PDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSL---------TEEPPLSNEAMDPA 295
Query: 450 HIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL--TSNRSRTKVQMQGV 507
H+ ++S+ D + KS E Q K+S+SK CL T+NRS TKV QG
Sbjct: 296 HV--SLSSNDDFNSKSSFQPSTWTVSCETQQ---KQSESKSQCLNKTANRSCTKVHKQGS 350
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEF 566
VGRA++L+ GYD LI ELE +F+++G L+ K W++VYTD + DMMLVGDDPW EF
Sbjct: 351 MVGRAINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEF 410
Query: 567 CNMVKRIFICSSQDVKKMSP 586
CN+V +I I + +V+KM P
Sbjct: 411 CNIVSKILIYTHDEVEKMIP 430
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 128 bits (322), Expect = 8e-27, Method: Composition-based stats.
Identities = 59/101 (58%), Positives = 73/101 (72%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF+K LT SD + GGFSV R A P LD P Q ++AKD+HG W+F+HI+RG
Sbjct: 2 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRG 61
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
PRRHLLTTGWSTFV K+L+AGD+ VFLR E+G+L VG+R
Sbjct: 62 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIR 102
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 27/228 (11%)
Query: 35 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 94
PRP SF+KVLTASD + FSVL A P LD + TP Q + +D+HG EW F
Sbjct: 52 PRPV--SFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMF 109
Query: 95 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSV 154
HI+RG P+RHLLT GW+ FV +K+L GD+ VF+R E+ ++HVG+R R +M +
Sbjct: 110 CHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNG 169
Query: 155 ISSQSMHL----GVLAT-----ASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNK 203
+ G ++T A+ F V Y P +S+F +S+ E++
Sbjct: 170 GGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM--- 226
Query: 204 FAVGMRYKMRFEGEDSPERR---FSGTVVGVEDFSPH-WKDSKWRSLK 247
+M FE E+S + F GT+ VE P W +S WR LK
Sbjct: 227 -------QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 112 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 146
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 147 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 203
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 204 GQLLARDKWIVVFTDDEGDMMLAGDDPW 231
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 241 SKWRSLKVQWDEPASITRPDRVSPWEIEPFVASA 274
SKWRSL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 3 SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATS 36
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 407 QVETGRKTETGTSCRLFGIELINH--ATSSAPSEKVPVSSLTTEGHIIS-TISAAADSDG 463
Q ET + E +CRLFGI L N+ T S S+K ++ I S + +D
Sbjct: 238 QEETAKSREG--NCRLFGIPLTNNMNGTDSTMSQKNNLNDAAGLTQIASPKVQDLSDQSK 295
Query: 464 KSDIAKEFKEKKQ--EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGY 521
S + +E+ + + PK++Q+K S+RS TKV QG+A+GR++DL+ Y
Sbjct: 296 GSKSTNDHREQGRPFQTNNPHPKDAQTK---TNSSRSCTKVHKQGIALGRSVDLSKFQNY 352
Query: 522 DHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+ L+ EL+ +F+ G+L K W IVYTD+E DMMLVGDDPW EFC MV++IFI + ++
Sbjct: 353 EELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEE 412
Query: 581 VKKMSPGS 588
V+KM+ G+
Sbjct: 413 VRKMNQGT 420
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 88/148 (59%), Gaps = 28/148 (18%)
Query: 416 TGTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKK 475
T S RLFG +L +++ + P +K P + T AA K
Sbjct: 106 TNCSYRLFGFDLSSNSPAPIPQDKQP----------MDTCGAA---------------KC 140
Query: 476 QEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
QE + + Q KQ ++RSRTKVQMQG+AVGRA+DLT L YD LIDELEEMF+I+
Sbjct: 141 QEPITPTSMSEQKKQQ---TSRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ 197
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPW 563
GQL R KW +V+TDDEGDMML GDDPW
Sbjct: 198 GQLLARDKWIVVFTDDEGDMMLAGDDPW 225
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 245 SLKVQWDEPASITRPDRVSPWEIEPFVASA 274
SL+VQWDEP ++ RPD+VSPWEIEPF+A++
Sbjct: 1 SLQVQWDEPTTVQRPDKVSPWEIEPFLATS 30
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 24/150 (16%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 566
+L + KW IV+TDDEGD MLVGDDPW+EF
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPWNEF 183
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 199/520 (38%), Gaps = 100/520 (19%)
Query: 110 GWSTFVTSKRLVAGDTFVFLRGENGELHVGVR------C-------LARQQSSMP----- 151
GWS FV K LVAGD+ VFLR ENG+L VG+R C R+ + P
Sbjct: 102 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHS 161
Query: 152 -SSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGM 208
+ + +A A+ A FV+ Y PR S +F + + A+ ++ GM
Sbjct: 162 NAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPGM 221
Query: 209 RYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 266
++KM FE +DS F G + V P W +S WR L+V WDEP + RV+PW
Sbjct: 222 KFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWL 281
Query: 267 IEPFVASATPNL-VQPVLAKNKRPRLSM--------EVPPLDLPSAASAPWSARLAQSHN 317
+E + S P++ + P K+ RL ++P S A P S S N
Sbjct: 282 VE--LVSHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDN 339
Query: 318 LTQLSVTAEDKRIDNHVAWHHKHSDFSSNSNFMSRTQSDGEWLTSPRVKFSQQLFQEAID 377
+ A H + SD N K LF +
Sbjct: 340 IPAGIQGAR------HAQFGLSSSDLHFN-------------------KLQLGLFPLGLQ 374
Query: 378 DNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR--------LFG--IEL 427
+ +A P+ + NN+ + + G T+ LFG I +
Sbjct: 375 QQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFLFGQPILI 434
Query: 428 INHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQV-QVSPKES 486
+ S + +SS SDG + F + Q P+ES
Sbjct: 435 EQQVSQSCSGDTAGISS----------------SDGNPEKTPNFSDGSGSAFHQNGPQES 478
Query: 487 QSKQSCLTSNR-----------SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK 535
S + LT + KV M+ VGR LDL+ L Y+ L +L MF I+
Sbjct: 479 SSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIE 538
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
++Y D+ G + +GD P+ EF +R+ I
Sbjct: 539 ---RAEMLSNVLYRDEAGIVKHIGDAPFGEFLKTARRLTI 575
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 144/310 (46%), Gaps = 38/310 (12%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFS-KVLTASDTSTHGGFSVL 60
A+ +TDEV+A+I+L P + PDP ++SP + S+S K L+ SD + G F V
Sbjct: 76 ADDKTDEVFAKISL--RPGLAAASRPDPGSSNSPPREPLSYSIKELSQSDANGGGSFCVP 133
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R P +D P Q LV D G +W F+H++R + RH+LTTGWS FV +K L
Sbjct: 134 RYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTGWSKFVNAKLL 193
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGV---------------- 164
VAGD VF+R NG+L VG+R + R ++ +
Sbjct: 194 VAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPPRNALARVPPK 253
Query: 165 -LATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRF-EGEDSP 220
+ A+ A F V Y PR +F++ N+ ++ + G M+F E ED+
Sbjct: 254 DVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTLWEPGSHVLMQFAEAEDTR 313
Query: 221 ERRFS-GTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDR---VSPWEIE----PFVA 272
++ G V + H K WR+L++ WD +S V+ W+++ P +
Sbjct: 314 RTMWADGHVKAI-----HQK--IWRALEIDWDVASSAISAQLGRFVNAWQVQRIAYPSIC 366
Query: 273 SATPNLVQPV 282
+L P+
Sbjct: 367 GGLGDLCYPL 376
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 24/147 (16%)
Query: 418 TSCRLFGIELINH-ATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
+SCRLFG +L + A+++ P +K +IS S +DS K +
Sbjct: 57 SSCRLFGFDLTSKPASATIPHDK----------QLISVDSNISDSTTKC---------QD 97
Query: 477 EQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG 536
SPKE + + TS RSR KVQMQG AVGRA+DLT L YD LI ELE+MF+I+G
Sbjct: 98 PNSSNSPKEQKQQ----TSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEG 153
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPW 563
+L + KW IV+TDDEGD MLVGDDPW
Sbjct: 154 ELSPKDKWAIVFTDDEGDRMLVGDDPW 180
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 5 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 63
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 69 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 128
Query: 64 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGW 111
A + P LD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG+
Sbjct: 129 AEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 26/260 (10%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ TDEV+ ++ L P + P D KV S K LT SD + G FSV
Sbjct: 71 LADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQHDGVKVVSSGKTLTPSDANNGGAFSV 130
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
+ A PPLD+ P+Q+L D+HG EW+ +H++RG P RHL+TT WS FV K+
Sbjct: 131 PSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITTNWSEFVDEKK 190
Query: 120 LVAGDTFVFL----RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQ 175
L+ GD+ VF+ R + VG+ +Q ++ I+ +S+ T + +A +
Sbjct: 191 LIGGDSLVFMKKSTRTGTETISVGI----HRQKFGAATKIAEKSV------TEAVELAEK 240
Query: 176 TM-FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPER--RFSGTVV 229
M F V Y P F+++ +A+ NK+ G+R K + ++S +R F GT+
Sbjct: 241 NMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSNFEGTIS 300
Query: 230 GVEDFSPHWKDSKWRSLKVQ 249
+ +P + WR L+V+
Sbjct: 301 ALS--AP---NRPWRMLEVR 315
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 5 ETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVLRKH 63
ETDEVYAQ+TL P Q + P P + + F K L ASDTSTHGGFSV R+
Sbjct: 96 ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRA 155
Query: 64 ATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 110
A + PPLD +Q P QEL+A+DLH EW+F+HIFRGQP+RHLLTTG
Sbjct: 156 AEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 88/154 (57%), Gaps = 2/154 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPA--DSPRPKVHSFSKVLTASDTSTHGGFSV 59
AE TDEV+A+I+L P P+ P P P +S R + F L DTST G F +
Sbjct: 75 AEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVNELLHRDTSTSGMFCI 134
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R P LD+N + P Q+LV +D G W+F HI+ + R+H LT GWS FV +K
Sbjct: 135 PRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQHRLTAGWSEFVDAKL 194
Query: 120 LVAGDTFVFLRGENGELHVGVRCLARQQSSMPSS 153
LVAGDT VF+R NG+L +G+R A + S P +
Sbjct: 195 LVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRA 228
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 15/273 (5%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPAD-SPRPKVHSFSKVLTASDTSTHGGFSV 59
+A+ TDEV+ ++ L P + P A+ + R +V SF K LT SD + F +
Sbjct: 74 LADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSFHI 133
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTFVTSK 118
R A P LD+ + +Q L D+HG +F H+ RG P+R++L + W++FV K
Sbjct: 134 PRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVKRK 193
Query: 119 RLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
+LVAGD+ +F++ G++ VG+R Q ++ + V+ A +
Sbjct: 194 KLVAGDSVIFMKDSTGKIFVGIR--RNTQFVAAAAEQKKDELEKAVMEALKLAEENKAFE 251
Query: 179 VVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFS 235
+VYY P+ F++ N E++ ++ MR KM+ + S + GT+ V S
Sbjct: 252 IVYY-PQGDDWCDFVVDGNVVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTISIVSRTS 308
Query: 236 PHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE 268
+ WR L+V WDE P RV+PW +E
Sbjct: 309 -----NLWRMLQVNWDEFQVSQIPRRVNPWWVE 336
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
S RS TKV G AVGR++DL+ L GY L+ ELE++F+++G LH K W +VYTD+E
Sbjct: 311 ASKRSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNE 370
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
DM+LVGDDPW EFC++V +I IC+ DV+ MSP
Sbjct: 371 NDMVLVGDDPWQEFCDVVCKILICTQDDVENMSP 404
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 223 RFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQP 281
R SG + G+ D P W DSKWR L V+WDE RVSPWEIEP V P L P
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSV--LPPALNVP 58
Query: 282 VLAKNKRPRL 291
L K RP L
Sbjct: 59 RL-KKLRPSL 67
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + T P P + + F K LTASDTSTHGGFSV
Sbjct: 54 ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTASDTSTHGGFSVP 113
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG R L W S R
Sbjct: 114 RRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQSWPVITLSGRR 171
Query: 121 VAGD 124
V D
Sbjct: 172 VGRD 175
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ N+
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--NIS 93
Query: 280 QPVLAKNKRPRLSMEV 295
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
N+ Q L K K R E+
Sbjct: 93 NISQSSLKKKKHWRQLNEI 111
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDE 552
T+ RS TKV QG VGRA+DL+ L GY+ L+ ELE++F ++G L K W I+YTD E
Sbjct: 229 TAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSE 288
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
D+M+VGDDPWHEFC++V +I I + ++V+KM+ G
Sbjct: 289 NDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFG 323
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 280 QPVLAKNKRPRLSMEV 295
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 280 QPVLAKNKRPRLSMEV 295
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 28/136 (20%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGNDF 35
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 36 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 93
Query: 280 QPVLAKNKRPRLSMEV 295
Q L K K R E+
Sbjct: 94 QSSLKKKKHWRQLNEI 109
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 28/136 (20%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 3 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 36
Query: 220 PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLV 279
E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++
Sbjct: 37 SEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DIS 94
Query: 280 QPVLAKNKRPRLSMEV 295
Q L K K R E+
Sbjct: 95 QSSLKKKKHWRQLNEI 110
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 28/131 (21%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNK 287
++ Q L K K
Sbjct: 93 DISQSSLKKKK 103
>gi|449532340|ref|XP_004173140.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 78
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 531 MFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK- 589
MFD++GQL R KWEIVYTDDEGDMMLVGDDPW EF NMV+RIFICS + VK MS GSK
Sbjct: 1 MFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGSKQ 60
Query: 590 LPMFSIEGE 598
L +EG+
Sbjct: 61 LTSIEVEGD 69
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+W+SLKVQWDE + RP++VSPW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
++ Q L K K R E+
Sbjct: 93 DISQSSLKKEKHWRQLNEI 111
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP-RPKVHSFSKVLTASDTSTHGGFSVL 60
A+ ETDEVYAQ+TL P Q + P +P + + F K LTASDTSTHGGFSV
Sbjct: 86 ADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTHGGFSVP 145
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFRG
Sbjct: 146 RRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 28/139 (20%)
Query: 157 SQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEG 216
+ M GV+A+ +A T+ MF V YKPR M+FEG
Sbjct: 1 ANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEG 34
Query: 217 EDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATP 276
+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++V PW+IE + S+
Sbjct: 35 KDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSS-- 92
Query: 277 NLVQPVLAKNKRPRLSMEV 295
++ Q L K K R E+
Sbjct: 93 DISQSSLKKKKHWRQLNEI 111
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 148/351 (42%), Gaps = 55/351 (15%)
Query: 1 MAEQETDEVYAQITLLPEPSQN-----EPTTPD------------------PCPADSPRP 37
+A TDEV+A++ L P + EP PD P P + P
Sbjct: 71 LANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPEVPDE 130
Query: 38 K------VHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYE 91
+ + S+ K+LT SDT G V R+ P LD+ +++L D+
Sbjct: 131 EDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSVTDIQDVV 188
Query: 92 WRFKHIFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSM 150
W +K+ + + + TTGWS FV K+LVA D+ VF++ G++ VG+ C +
Sbjct: 189 WTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGI-CRKAMYPAT 247
Query: 151 PSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGM 208
S+++ + A F V Y P + F++ + EA+ N + GM
Sbjct: 248 EEEGGKSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKNGWEFGM 307
Query: 209 RYKMR---FEGEDSPERRF--SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 263
K+R F +S + + GT+ + + + WR L+V WD P P+RV+
Sbjct: 308 GIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVP--SWRMLQVNWDGPDISQNPNRVN 365
Query: 264 PWEIE--PFVASATPNLVQP-----------VLAKNKRPRLSMEVPPLDLP 301
PW+++ P + ++ L P K PRLS PL +P
Sbjct: 366 PWQVDIYPIPSQSSSPLQMPHSYPPIPPPLLPFPPTKSPRLSQSSSPLQMP 416
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 28/132 (21%)
Query: 164 VLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR 223
V+A+ +A T+ MF V YKPR M+FEG+D E+R
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKR 34
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVL 283
+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S+ ++ Q L
Sbjct: 35 YDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS--DISQSSL 92
Query: 284 AKNKRPRLSMEV 295
K K R E+
Sbjct: 93 KKKKHWRQLNEI 104
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 27/304 (8%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+ TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 71 FVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCVP 128
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+ + P LD+++S Q + DL EWR+ + + R H TGW FV K+L
Sbjct: 129 IECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNFVREKKL 182
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VA D+ VF++ G++ VG+R + + + + + + VL A A VV
Sbjct: 183 VANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVLDAAELAEKNTAFDVV 242
Query: 181 YYKPRTS---QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGVE 232
YY P S F++ +A+ + GMR K+ + +S + + GT+ V
Sbjct: 243 YY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFVF 301
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLAKN 286
+ S + + WR L+V WD P+ V+PW++E P +S+T N P LA++
Sbjct: 302 NHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEVYNIHAPSTSSSTVN--NPRLAES 357
Query: 287 KRPR 290
P+
Sbjct: 358 SSPQ 361
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
F K L ASDTSTHGGFSV R+ A + P LD +Q P QEL+A+DLH EW+F+HIFRGQ
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 90
Query: 102 PRRHLLTT 109
P+RHLLTT
Sbjct: 91 PKRHLLTT 98
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 85/154 (55%), Gaps = 11/154 (7%)
Query: 417 GTSCRLFGIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQ 476
G SC+LFGI L + A S V++ E + I D+D + K K+
Sbjct: 164 GNSCKLFGIHLDSPAKSEPLKSPPSVATPAAEKWMADGI----DADKSPEPHKTPKQLGA 219
Query: 477 EQV----QVSPKESQSKQ--SCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEE 530
QV + P+ S+ Q S S RS KV QG+A+GR++DLT GY L+ EL+E
Sbjct: 220 TQVDPVPERCPQASRGTQCKSQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDE 279
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPW 563
MFD G+L +K W +VYTD EGDMMLVGDDPW
Sbjct: 280 MFDFNGELKGCSKEWMVVYTDYEGDMMLVGDDPW 313
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 73/131 (55%), Gaps = 28/131 (21%)
Query: 165 LATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRF 224
+A+ +A T+ MF V YKPR M+FEG+D E+R+
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDFSEKRY 34
Query: 225 SGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLA 284
GT++GV D SPHWKDS+WRSLKVQWDE + RP++VSPW+IE + S ++ Q L
Sbjct: 35 DGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSL--DISQSSLK 92
Query: 285 KNKRPRLSMEV 295
K K R E+
Sbjct: 93 KKKHWRQLNEI 103
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
Query: 130 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 187
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 21 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 80
Query: 188 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 245
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 81 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 140
Query: 246 LKV 248
+KV
Sbjct: 141 VKV 143
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 89/141 (63%), Gaps = 13/141 (9%)
Query: 130 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRTS-- 187
R E +L +G+R +R Q+ MPS V+SS SMH+ +LA +HA AT + F +++ PR S
Sbjct: 225 RNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPT 284
Query: 188 QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRS 245
+F+I L+KY++A+ + + +VGMR++M FE E+S RR+ GT+ V D P W S WRS
Sbjct: 285 EFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRS 344
Query: 246 LK-------VQW--DEPASIT 257
+K QW +EP +T
Sbjct: 345 VKGDQGVNATQWLHNEPILVT 365
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Query: 1 MAEQETDEVYAQITLLP--EPSQNEPTTPDPCPA-DSPRPKVHSFSKVLTASDTSTHGGF 57
+ + TDEV+A++ L P + +E P PA D V SF K+LT SD ++ GF
Sbjct: 94 LVDPHTDEVFAKLLLTPVMDGHGHEQEAPPEVPAEDDDGYNVVSFVKILTQSDCNSGCGF 153
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
V LP L ++ P+Q+L D+ G W++ HI+RG+ +RHL + GW++FV +
Sbjct: 154 IVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWTSFVNN 213
Query: 118 KRLVAGDTFVFLR 130
K+LVAGD+FVF++
Sbjct: 214 KKLVAGDSFVFIK 226
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+AEQ+TDEVYAQITL+PE Q EP +PD CP + P+P VHSF KVLTASDTSTHG FSVL
Sbjct: 92 LAEQDTDEVYAQITLMPEADQTEPISPDSCPEEPPKPDVHSFCKVLTASDTSTHGEFSVL 151
Query: 61 RK 62
RK
Sbjct: 152 RK 153
>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 169
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 204 FAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPASITRPDRVS 263
F V + +M+FEG+D E+R+ GT++GV D SPHWKDS+WRSLKVQWDE + RP++VS
Sbjct: 1 FNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSPHWKDSEWRSLKVQWDELSPFLRPNQVS 60
Query: 264 PWEIEPFVASATPNLVQPVLAKNKRPRLSMEV 295
PW+IE + S+ ++ Q L K K R E+
Sbjct: 61 PWDIEHLIPSS--DISQSSLKKKKHWRQLNEI 90
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 136/304 (44%), Gaps = 27/304 (8%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVL 60
+ TDEV+A++ L P Q P P D + S+ K LT SD + V
Sbjct: 71 FVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR--VLCVP 128
Query: 61 RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRL 120
+ + P LD+++S Q + DL E + + + R H TGW FV K+L
Sbjct: 129 IECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSNSSRLH---TGWLNFVREKKL 182
Query: 121 VAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
VA D+ VF++ G++ VG+R + + + + + VL A A VV
Sbjct: 183 VANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLDAAELAEKNTAFDVV 242
Query: 181 YYKPRTS---QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGVE 232
YY P S F++ +A+ + GMR K+ + +S + + GT+ V
Sbjct: 243 YY-PTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFVY 301
Query: 233 DFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIE------PFVASATPNLVQPVLAKN 286
+ S + + WR L+V WD P+ V+PW++E P +S+T N P LA++
Sbjct: 302 NHSSNVPN--WRMLEVNWDGLDIPQNPNLVNPWQVEVYNIPAPSTSSSTVN--NPRLAES 357
Query: 287 KRPR 290
P+
Sbjct: 358 SSPQ 361
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 102/233 (43%), Gaps = 50/233 (21%)
Query: 108 TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ--------- 158
G TFV K+LVAGD+ VF+R ENG+L VG+R + P +
Sbjct: 138 NNGGGTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPPTPAA 197
Query: 159 -------SMHLG------------------------VLATASHAVATQTMFVVYYKPRTS 187
SM L V+ A+ AV+ Q VVYY PR S
Sbjct: 198 GGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYY-PRAS 256
Query: 188 --QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP-HWKDSKW 243
+F + A+ ++ GMR+KM FE EDS F GTV V+ P W +S W
Sbjct: 257 TPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 316
Query: 244 RSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVP 296
R L+V WDEP + RVSPW +E + S P + LA PR + VP
Sbjct: 317 RLLQVSWDEPDLLQNVKRVSPWLVE--LVSNMPAI---HLAPFSPPRKKLCVP 364
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 182 YKPRTS--QFIISLNKYLEAV-NNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-H 237
Y PRTS +F++ L KY +A + ++GMR++M FE E+S RR+ GT+ G+ D P
Sbjct: 2 YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRL 291
W +S+WR+L+V WDE + + +RVS WEIE ATP + P + KRP L
Sbjct: 62 WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE---TVATPFFICPPFFRLKRPLL 112
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 12/111 (10%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKV G VGR++D+T Y L EL MF ++GQL +T W++V+ D E D
Sbjct: 771 RTYTKVYKLG-NVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEND 829
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDILLSSD 605
++LVGDDPW EF + V+ I I S Q+V +MS EG DI+ ++D
Sbjct: 830 ILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQ---------EGMDIVNNAD 871
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 164 VLATASHAVATQTMFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPE 221
+L+ ++++ +++F + + PR S+FI+ K+L+++N F+VG R+K+ E ED+ E
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 222 RRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQ 280
R F G ++G+ + P HW SKW+SL ++WD + +RVSPW+IE +S + V
Sbjct: 61 RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS---VT 116
Query: 281 PVLAKNKRPRLSMEVPPLDL 300
L+ + R + PP DL
Sbjct: 117 HRLSSSVSKRTKLCFPPSDL 136
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+T GYD L +L MF I+GQL + W++VYTD E D
Sbjct: 150 RTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHEND 208
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 209 ILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 239
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 4/74 (5%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSP----RPKVHSFSKVLTASDTSTHGGF 57
AE + DEVYAQ+TLLPE E + + PA P RP+VHSF K LTASDTSTHGGF
Sbjct: 104 AEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDTSTHGGF 163
Query: 58 SVLRKHATECLPPL 71
SVLR+HA ECLPPL
Sbjct: 164 SVLRRHADECLPPL 177
>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
Length = 223
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 114/230 (49%), Gaps = 24/230 (10%)
Query: 363 PRVKFSQ-QLFQEAIDDNKNISAWPAHSGHSTPHPSKPNNDTLLEQVETGRKTETGTSCR 421
P F+Q Q+F++A+ D + P++SG NND LL +TE
Sbjct: 48 PSSNFNQHQMFKDALPDVEMEGVDPSNSGLF-----GINNDNLLG---FPIETEDLLINA 99
Query: 422 LFGIELINHATSSA----PSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQE 477
L ++ NH ++ P +K + ++T S + S G+SD+A +
Sbjct: 100 LDSVKYQNHISTDVENNYPMQKDALQEIST--------SMVSQSFGQSDMAFNSIDSAIN 151
Query: 478 QVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQ 537
K S L R+ TKV +G AVGR++D+ GY+ L L MF I+GQ
Sbjct: 152 DGAFLNKNSWPAAPLLQRMRTFTKVYKRG-AVGRSIDIGRYSGYEELKHALARMFGIEGQ 210
Query: 538 LHTRTK--WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
L R + W++VY D E D++L+GDDPW EF N V+ I I S Q+V++MS
Sbjct: 211 LEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMS 260
>gi|284811179|gb|ADB96328.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 216
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307923|gb|ADL70256.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 211
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307943|gb|ADL70266.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 219
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307925|gb|ADL70257.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307941|gb|ADL70265.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 218
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307929|gb|ADL70259.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307935|gb|ADL70262.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307939|gb|ADL70264.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 212
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|304307933|gb|ADL70261.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307937|gb|ADL70263.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 213
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 1 MAEQETDEVYAQITLLPEPSQNEPTTPDPCPA-----DSPRPKVHSFSKVLTASDTSTHG 55
+A+ TDEV+A++ L P + + P P D + SF+++L ++ S H
Sbjct: 81 LADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTNVSKHA 140
Query: 56 GFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-TTGWSTF 114
F + R A PPL M S Q L+ D+HG W+F H+ G +R++ T+ W++F
Sbjct: 141 -FYIPRFCAENMFPPLGMEVS---QHLLVTDVHGEVWKFHHVCHGFAKRNVFYTSEWASF 196
Query: 115 VTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVAT 174
V K+L GD VF++ G+L VG+R R+ ++ + V+ A
Sbjct: 197 VERKKLDVGDAVVFMKNSTGKLFVGIR---RKDAAEQ----KKDELEKAVMEAVKLAEEN 249
Query: 175 QTMFVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGV 231
+ +VYY PR F++ N E++ ++ MR KM+ + S + GT+ V
Sbjct: 250 KPFEIVYY-PRGDDWCDFVVDGNIVDESMKIQWNPRMRVKMK--TDKSSRIPYQGTITTV 306
Query: 232 EDFSPHWK 239
S W+
Sbjct: 307 SRTSNLWR 314
>gi|304307945|gb|ADL70267.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307947|gb|ADL70268.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 199
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811183|gb|ADB96330.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|284811187|gb|ADB96332.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307927|gb|ADL70258.1| auxin response factor 1 [Arabidopsis thaliana]
gi|304307931|gb|ADL70260.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 198
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 7/85 (8%)
Query: 224 FSGTVVGV-EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPV 282
FSGT+VGV E+ S W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+
Sbjct: 1 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60
Query: 283 LAKNKRPRLSMEVPPLDLPSAASAP 307
+NKRPR P LPS A+ P
Sbjct: 61 PQRNKRPR------PPGLPSPATGP 79
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGD 554
R+ TKVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E D
Sbjct: 254 RTYTKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEND 312
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 313 ILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 343
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 493 LTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTD 550
L R+ TKV +G AVGR++D++ GYD L L MF I+GQL R + W++VY D
Sbjct: 71 LKRMRTFTKVYKRG-AVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKD 129
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
E D++L+GDDPW EF VK I I S Q+V++MS
Sbjct: 130 HEDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMS 164
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEG 553
N + KVQ +G +VGR++D+ GYD L +L MF I+GQL + W++VY D E
Sbjct: 478 NANLYKVQKRG-SVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHEN 536
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D++LVGDDPW EF N V+ I I SS +V++MS
Sbjct: 537 DILLVGDDPWEEFVNCVQSIKILSSAEVQQMS 568
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 24 PTTPDPCPADSPRP----KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPT 79
P TP P D PR + H F K +T SD + ++HA C P LD++ ++P
Sbjct: 109 PVTPPNLPRDEPRESSPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPG 167
Query: 80 QELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 138
Q L +D+ G WRF++ + + ++LT GWS FV K+L AGD F RG N EL++
Sbjct: 168 QTLSFEDVSGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 61/107 (57%), Gaps = 23/107 (21%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEW-RFKHIF 98
H F K LTASDTSTHGGFSV R+ A +C PPL+ W RFK
Sbjct: 121 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECK 162
Query: 99 RGQPRRHLL----TTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
R R +++ TTG S FV K+LV+ D +FLRG+NGEL +GVR
Sbjct: 163 RTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVR 209
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 42 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
F K L ASDTSTHGGFSV R+ A + PPLD +Q P QEL+A+DLH EW+F+HIFR
Sbjct: 31 FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 88
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%), Gaps = 29/281 (10%)
Query: 3 EQETDEVYAQITLLPEPSQNEP-------TTPDPCPADSPRPKVHSFSKVLTASDTSTHG 55
+ +TDEV+A+I+L P P + ++ P PA P K+ F+K L+ +D
Sbjct: 77 DDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKDLSQTDVYAKF 136
Query: 56 GFSVLRKHATECLPPLDMN----QSTPTQELVAKDLHGYEWRFKHIFRGQP-RRHLLTTG 110
+ +H +P ++ + Q Q++V +D G WRF +R P + H L TG
Sbjct: 137 RIPLENEHVLP-IPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYRVNPSKEHSLGTG 195
Query: 111 WSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
W F +KRL AGD VF+R NG+L VGVR L + Q V+
Sbjct: 196 WLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLHVPRYRP----FDFQGPAQDVMEAVRL 251
Query: 171 AVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
A A + F V Y PR + +FI+ ++ +A+ + G +M +++ +
Sbjct: 252 AAAGRP-FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVVRMEVMEDENRQH-----T 305
Query: 229 VGVEDFSPHWKDSKWRSLKVQW--DEPASITRPDRVSPWEI 267
V V + + WR L++ W D P + TR V+ W++
Sbjct: 306 VWVHGRVNAIRQNIWRMLEIIWGVDPPLATTR--SVNAWQV 344
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E D
Sbjct: 227 RTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDREND 285
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-PGS 588
++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 286 VLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 320
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 7 DEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSV 59
+E++A ++L+P +P P DP P+ P+V SF K LT +D + +
Sbjct: 403 NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFI 459
Query: 60 L--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
+ R+ A LP L +N+ P L KD+HG EW + ++ H+L++GW F +
Sbjct: 460 VPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANA 514
Query: 118 KRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
RLV GD VF+R ++GE ++G+R R P SV V+ A +
Sbjct: 515 NRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEP 564
Query: 177 MFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVED 233
V Y + +F++ A+ KF GM + E+ P G V+ +E+
Sbjct: 565 FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIEN 624
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 267
++ S WR ++V+W A + R V+ W+I
Sbjct: 625 YA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 652
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ T+E YA ITL P + P A + ++ F K L +SD F
Sbjct: 80 ADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAEYRDRF 139
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
+V A + PPL + Q L+ KDL G F + G R L W F
Sbjct: 140 AVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFRDD 195
Query: 118 KRLVAGDTFVFL-RGENGELHVGVR 141
V GD+ +F+ R ++ EL+VGVR
Sbjct: 196 MDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 7 DEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSV 59
+E++A ++L+P +P P DP P+ P+V SF K LT +D + +
Sbjct: 362 NELFATMSLIPVARDQAIQPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFI 418
Query: 60 L--RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
+ R+ A LP L +N+ P L KD+HG EW + ++ H+L++GW F +
Sbjct: 419 VPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANA 473
Query: 118 KRLVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
RLV GD VF+R ++GE ++G+R R P SV V+ A +
Sbjct: 474 NRLVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEP 523
Query: 177 MFVVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVED 233
V Y + +F++ A+ KF GM + E+ P G V+ +E+
Sbjct: 524 FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIEN 583
Query: 234 FSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEI 267
++ S WR ++V+W A + R V+ W+I
Sbjct: 584 YA----TSIWRMIQVEWPSCAGMNR--YVNFWQI 611
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 104/270 (38%), Gaps = 37/270 (13%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ T+E YA ITL P + P A + ++ F K L +SD F
Sbjct: 40 ADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAEYRDRF 99
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
+V A + PPL + Q L+ KDL G F + G R L W F
Sbjct: 100 AVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFRDD 155
Query: 118 KRLVAGDTFVFL-RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQT 176
V GD+ +F+ R ++ EL+VGV R+Q ++ + + +S L A V
Sbjct: 156 MDFVDGDSVIFMRRRDDDELYVGV----RRQRTLDKPLRTRRSRPPTPLPVAVQEVIAAA 211
Query: 177 -------MFVVYYKPRT--SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGT 227
F Y+ R +F++ E G+R + RF E E ++
Sbjct: 212 GRAAAGEQFTATYRSRQDGDEFVVPREVVEE--------GLRLRSRFTPEMEVEFVWALE 263
Query: 228 VVGVEDFSPHWKDSK-------WRSLKVQW 250
PH K + WRS+++ W
Sbjct: 264 DGAPPSVGPHGKITAIHDTTWMWRSVEIGW 293
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 50/57 (87%), Gaps = 1/57 (1%)
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
MF+I+G+L +K W++VYTD+EGDMMLVGDDPW EFC++V++IFI + ++V+KM+P
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTP 57
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%)
Query: 149 SMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVN-NKFA 205
S+PSSV+S+ +M + L A A +T+ V Y P S+F++ L+KY A+ ++ +
Sbjct: 36 SLPSSVLSANNMPIDALVVA----ANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLS 91
Query: 206 VGMRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSP 264
+G+R+ M FE + GT+VG+ D P W DS+W++++V+WD+P +P+RV
Sbjct: 92 IGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCS 151
Query: 265 WEI 267
W+I
Sbjct: 152 WDI 154
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 531 MFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
MFD +G+L + ++ W+IVYTDDEGDMMLVGDDPW EFC++V++I+I + ++V+KM+ S
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSA 60
Query: 590 LP 591
P
Sbjct: 61 AP 62
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+ L P S+ + P A S P + F K LTASD STHGGFS+
Sbjct: 68 ADKDTDEVYAQMMLQPVNSETDVFPIQSLGSYAKSKHPAEY-FCKNLTASDMSTHGGFSM 126
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
R+ A + P LD + P QEL+ +DLH W F+HI+RG+
Sbjct: 127 PRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 2 AEQETDEVYAQITLLPEPSQNE--PTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSV 59
A+++TDEVYAQ+ L P S+ P A S P + F K LTASD STHGGFS+
Sbjct: 68 ADKDTDEVYAQMMLQPVNSETNVFPIQSLGSYAKSKHPAEY-FCKNLTASDMSTHGGFSM 126
Query: 60 LRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQ 101
R+ A + P LD + P QEL+ +DLH W F+HI+RG+
Sbjct: 127 PRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 27 PDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKD 86
P +D R + H F K +T SD + ++HA C P LD+ + P Q L +D
Sbjct: 184 PSTSASDFARNREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFED 242
Query: 87 LHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
+ G WRF++ + + ++ T GWS F+ K+L AGDT F RG N EL++ R
Sbjct: 243 VSGKHWRFRYSYWNSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFR 297
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 22 NEPTTPDPCPADSPRPKV---HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTP 78
N P D P+ P+P + H F K +T SD + ++HA C P LD+ + P
Sbjct: 49 NPPNESDDPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVP 107
Query: 79 TQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHV 138
Q L +D+ G WRF++ + + ++ T WS F+ K+L AGDT F RG N EL++
Sbjct: 108 CQTLSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYI 167
Query: 139 GVR 141
R
Sbjct: 168 DFR 170
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 13/118 (11%)
Query: 93 RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL-------RGENGELHVGVRCLAR 145
R K F RHLLTTGWS FV++K LVAGD+ +F R E +L G+R
Sbjct: 50 RLKKCFL---LRHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKNQLLFGIRHAIW 106
Query: 146 QQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQFII-SLNKYLEAV 200
Q+ MPSSV+S+ S+HLG+LA +HA AT + F ++Y PR S+F+I SL+ LE V
Sbjct: 107 PQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFVIPSLSIMLEYV 164
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 551
T +R+ KV G +VGR+LD+T Y L +EL +MF I+G+L R+ W++V+ D
Sbjct: 33 TPSRTFVKVYKSG-SVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDR 91
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
E D++L+GDDPW F N V I I S +DV+KM
Sbjct: 92 ENDVLLLGDDPWEAFVNNVWYIKILSPEDVQKMG 125
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
++R+ KV G +VGR+LD+T Y L +EL +MF I+GQL R+ W++V+ D E
Sbjct: 348 TSRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRE 406
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMF 593
D++L+GDDPW F N V I I S +DV K+ P +
Sbjct: 407 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKLGKQGNDPRY 447
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 82.4 bits (202), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 502 VQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGD 560
V QG VGR +DL YD L L +F+++GQL TK W++VYTD E D++LVGD
Sbjct: 1 VYQQG-KVGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 561 DPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGED 599
DPW EFC V+ + I S QD + G ++P S E +D
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVG-RIPASSCEEDD 97
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 208 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 266
MR++MRFE ED+ ERR +G + G+ D P W SKWR L V+WD+ + R +RVSPWE
Sbjct: 1 MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEA-ARRNRVSPWE 59
Query: 267 IEPF-VASATPNLVQPVLAKNKRPRLSMEVPPLDLPS 302
IEP AS + NL+ L KR R+ M L+ P+
Sbjct: 60 IEPSGSASNSSNLMSAGL---KRTRIGMTSVKLEFPT 93
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
+ R+ KV G +VGR+LD+T Y L +EL +MF IKGQL R+ W++V+ D E
Sbjct: 21 TTRTFVKVYKSG-SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 79
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM-SPGS 588
D++L+GDDPW F N V I I S +DV KM PG+
Sbjct: 80 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPGN 116
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 556
R+ TKV G ++GRA+D+T Y L EL MF++ GQL ++ W++V+ D EGD++
Sbjct: 30 RTYTKVYKLG-SIGRAVDVTRFSNYTELRWELARMFNLDGQLDQKSGWQLVFIDHEGDIL 88
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDV 581
LVGDDPW EF + V+ I I S +V
Sbjct: 89 LVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 35/256 (13%)
Query: 23 EPTTP-DPCPADSPRPKVH----SFSKVLTASDTSTHGGFSVL--RKHATECLPPLDMNQ 75
+P P DP P+ P+V SF K LT +D + ++ R+ A LP L +N+
Sbjct: 13 QPQAPADPGPSS---PQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNE 69
Query: 76 STPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG-ENG 134
P L KD+HG EW + ++ H+L++GW F + RLV GD VF+R ++G
Sbjct: 70 HVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSG 124
Query: 135 ELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYY-KPRTSQFIISL 193
E ++G+R R P SV V+ A + V Y + +F++
Sbjct: 125 ERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEPFEVTYLSRQDGDEFVVPC 174
Query: 194 NKYLEAVNNKFAVGMRYKMRFEGEDS--PERRFSGTVVGVEDFSPHWKDSKWRSLKVQWD 251
A+ KF GM + E+ P G V+ +E+++ S WR ++V+W
Sbjct: 175 GIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIENYA----TSIWRMIQVEWP 230
Query: 252 EPASITRPDRVSPWEI 267
A + R V+ W+I
Sbjct: 231 SCAGMNR--YVNFWQI 244
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 62
+ E+ E YA I+LLP S ++ T PA P F K L+ +D +++ VL
Sbjct: 83 DAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSNA--LVLPA 138
Query: 63 HATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-------TTGWSTFV 115
A LPPLD+ + +DL G + F HI+ + R++L GW FV
Sbjct: 139 GAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDNDGWRGFV 198
Query: 116 TSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSMHLGVLATA 168
+KRL DT VF+R +GEL VGVR R + P + V++
Sbjct: 199 KAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK----VVSEV 254
Query: 169 SHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGMRYKMRFEGEDSPERR 223
A+ T F V Y PR T +F++S ++Y+ + F G +R +
Sbjct: 255 WLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMNPLQIAQ-S 313
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 255
SGTV + P WR L+V WD+ AS
Sbjct: 314 ISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 6 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 56
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 399 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 455
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 111
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 456 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 508
Query: 112 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 509 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 560
Query: 171 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 561 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 617
Query: 229 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 277
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 618 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 666
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 120/272 (44%), Gaps = 34/272 (12%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLRK 62
+ E+ E YA I+LLP S ++ T PA P F K L+ +D +++ VL
Sbjct: 83 DAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSNA--LVLPA 138
Query: 63 HATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLL-------TTGWSTFV 115
A LPPLD+ + +DL G + F HI+ + R++L GW FV
Sbjct: 139 GAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVNDNDGWRGFV 198
Query: 116 TSKRLVAGDTFVFLR------GENGELHVGVRCLARQQSS-MPSSVISSQSMHLGVLATA 168
+KRL DT VF+R +GEL VGVR R + P + V++
Sbjct: 199 KAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK----VVSEV 254
Query: 169 SHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGMRYKMRFEGEDSPERR 223
A+ T F V Y PR T +F++S ++Y+ + F G +R +
Sbjct: 255 WLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMNPLQIAQ-S 313
Query: 224 FSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 255
SGTV + P WR L+V WD+ AS
Sbjct: 314 ISGTVRTFDHLRP------WRMLEVDWDQAAS 339
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 44/292 (15%)
Query: 6 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 56
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 423 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 479
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 111
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 480 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 532
Query: 112 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASH 170
S FV +KRL GDT +F+R GE VGVR + MP + +A A
Sbjct: 533 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVR--RKPHGGMPVGIPDKH------VADAWL 584
Query: 171 AVATQTMFVVYYKP--RTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTV 228
++ F V Y P T++F++ + +E + A G R ++ +D+ RR V
Sbjct: 585 DASSAQPFRVTYCPWQGTAEFVVRREE-VEG-SPPLAPGTRVRLLMNPDDA-RRRSQPPV 641
Query: 229 VG-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 277
G V D H + S+WR L+V WD P + T RV+ W+++P + P
Sbjct: 642 YGTVRDV--HCR-SEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 690
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 29/180 (16%)
Query: 400 NNDTLLEQVETGRKTETGTSCRLFGIELIN--HATSSAPSEKVPVSSLTTEGHIISTISA 457
N+ +E G + G+ +LFG++++N + S S+ S ++ +
Sbjct: 99 NSKGNVESDVMGSQPTGGSKLKLFGVDILNGPESPSQHGSKLTHFGSFPAASKTVNFLEQ 158
Query: 458 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 517
+ + G SD +Q +SC TKV G A+GR++D++
Sbjct: 159 SKSTSGNSD-------------------TQCSRSC-------TKVLKYGCALGRSIDMSR 192
Query: 518 LVGYDHLIDELEEMFDIKGQLHTRTK-WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
+ GY LI EL+++F +G L +K W + Y D EG+ L+GD PW + MV+++FIC
Sbjct: 193 VKGYGELISELDKLFGFEGSLLDGSKDWHVTYQDREGNTKLLGDYPWSDSQAMVRKMFIC 252
>gi|284811185|gb|ADB96331.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 183
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 6/70 (8%)
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLSMEVPP 297
W DS+WRSLKVQWDEP+S+ RP+RVSPWE+EP VA++TP+ +NKRPR P
Sbjct: 1 WHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPR------P 54
Query: 298 LDLPSAASAP 307
LPS A+ P
Sbjct: 55 PGLPSPATGP 64
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKH 96
K+ F+K L+ +D + +H LP P+ Q++V +D G WRF
Sbjct: 158 KLRYFTKELSQTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSK 214
Query: 97 IFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 155
+ P ++H LTTGW F +KRL AGD VF+R NG+L VGVR L + +
Sbjct: 215 TYSVNPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQG 274
Query: 156 SSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 213
+ A A F V Y PR + +FI+ ++ +A+ + G +M
Sbjct: 275 PDPDQPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM- 333
Query: 214 FEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPA 254
E + R+++ VVG VE + + WR L++ W P+
Sbjct: 334 -EVMEDENRQYTMWVVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLP-PLDMNQSTPTQELVAKDLHGYEWRFKH 96
K+ F+K L+ +D + +H LP P+ Q++V +D G WRF
Sbjct: 158 KLRYFTKELSQTDVYARFRIPLDNEH---VLPIPMVDTDGVQRQDVVMRDTSGKSWRFSK 214
Query: 97 IFRGQP-RRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVI 155
+ P ++H LTTGW F +KRL AGD VF+R NG+L VGVR L + +
Sbjct: 215 TYSVNPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQG 274
Query: 156 SSQSMHLGVLATASHAVATQTMFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMR 213
+ A A F V Y PR + +FI+ ++ +A+ + G +M
Sbjct: 275 PDPDQPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRM- 333
Query: 214 FEGEDSPERRFSGTVVG-VEDFSPHWKDSKWRSLKVQWDEPA 254
E + R+++ VVG VE + + WR L++ W P+
Sbjct: 334 -EVMEDENRQYTMWVVGRVEAI----RQNIWRMLEIIWGVPS 370
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 122 AGDTF-VFLRGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVV 180
GD F VFL GE S S +S++S V+ +A+ A A Q VV
Sbjct: 15 GGDNFSVFLGGEMKSSGNTNNNTNSNGFSRNRSKVSAKS----VVESATLAAAGQPFEVV 70
Query: 181 YYKPRTS--QFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTVVGVEDFSP- 236
YY PR S +F + A+ +++ GMR+KM FE EDS F GT+ V+ P
Sbjct: 71 YY-PRASTPEFCVKAQAVDAALRVQWSAGMRFKMAFETEDSSRISWFMGTISSVQLADPV 129
Query: 237 HWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNLVQPVLAKNKRPRLS 292
W +S WR L+V WDEP + RVSPW +E V+S P + P K+ R++
Sbjct: 130 CWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-VVSSMPPIQLTPFTLPKKKLRVT 184
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGD 560
KV M+ VGR LDL+ Y+ L L +MF I+ +L + ++Y D +G + GD
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-ELELSNR--VLYKDTDGTVRHTGD 502
Query: 561 DPWHEFCNMVKRIFICSSQDVKKM 584
+P+ +F V+R+ I S M
Sbjct: 503 EPYRDFMKTVRRLTILSDSSSDNM 526
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K +T SD + ++HA C P LD++ ++P Q L +D+ G WRF++ +
Sbjct: 163 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYW 221
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
+ ++LT GWS FV K+L AGD F RG + EL++ R
Sbjct: 222 NSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFR 263
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 556
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDV 581
LVGDD W EF + V+ I I S +V
Sbjct: 241 LVGDDRWEEFVSSVRGIRIISPSEV 265
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 556
RS TKV G ++GR+L++ Y L EL MF ++GQL + W++VY D++GD++
Sbjct: 182 RSYTKVLKLG-SIGRSLNIARFNSYAELRSELARMFGLEGQLDQSSHWQLVYMDNDGDIL 240
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDV 581
LVGDD W EF V+ I I S +V
Sbjct: 241 LVGDDRWEEFVTSVRGIRIISPSEV 265
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 511 RALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFCN 568
R D+ GYD L +L MF I+GQL + W++VY D E D++LVGDDPW EF N
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 569 MVKRIFICSSQDVKKMS 585
V+ I I SS +V++MS
Sbjct: 422 CVQSIKILSSAEVQQMS 438
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK--WEIVYTDDE 552
S R+ KV G + GR+LD++ YD L EL +F ++GQL R + W++V+ D E
Sbjct: 46 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRE 104
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GDDPW EF N V I I S +V++M
Sbjct: 105 NDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 136
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 510 GRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
GR+LD+T Y L EL +F ++GQL R+ W++V+ D E D++LVGDDPW EF
Sbjct: 389 GRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFV 448
Query: 568 NMVKRIFICSSQDVKKM 584
+ V I I S Q+V++M
Sbjct: 449 STVSCIKILSPQEVQQM 465
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ KV G + GR+LD+T Y L EL MF ++GQL R+ W++V+ D E D
Sbjct: 27 RTFVKVYKSG-SFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDREND 85
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
++L+GDDPW EF N V I I S Q+V++M
Sbjct: 86 VLLLGDDPWPEFVNSVWCIKILSLQEVQQM 115
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGDMMLVGDDPWHE 565
+VGR+LD++ Y L EL +MF I+G+L R+ W++V+ D E D++L+GDDPW
Sbjct: 434 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 493
Query: 566 FCNMVKRIFICSSQDVKKM 584
F N V I I S +DV K+
Sbjct: 494 FVNNVWYIKILSPEDVLKL 512
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 208 MRYKMRFEGEDSPERRFSGTVVGVEDFSP-HWKDSKWRSLKVQWDEPASITRPDRVSPWE 266
MR++M FE E+S RR+ GT+ G+ D P W +S WRS+KV WDE + R RVS WE
Sbjct: 1 MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60
Query: 267 IEPFV 271
IEP
Sbjct: 61 IEPLT 65
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 74.3 bits (181), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
++GRA+D+ Y L EL MF + GQL R W++V+ D E D++LVGDDPW EF
Sbjct: 7 SIGRAVDVARFKNYVELRAELSRMFGLDGQLDQRNGWQLVFVDKENDLLLVGDDPWEEFV 66
Query: 568 NMVKRIFICSSQDV 581
+ V+ I I S +V
Sbjct: 67 SSVRGIRILSPSEV 80
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 556
RS KV G ++ RA+D+ Y L EL MF++ GQL W++V+TD+E D++
Sbjct: 717 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPTVGWQLVFTDNEDDLL 775
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDV 581
LVGDDPW EF V+ I I + +V
Sbjct: 776 LVGDDPWDEFVRNVRGIRILTPAEV 800
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDRENDVLL 65
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|224070983|ref|XP_002303315.1| predicted protein [Populus trichocarpa]
gi|222840747|gb|EEE78294.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------- 533
ESQ+K + K+ M+GV +GR +DL Y+ L ++E+F
Sbjct: 204 ESQNKPAGTCKKGLFVKINMEGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSC 263
Query: 534 ------------IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
I G L ++++VY D+EGD MLVGD PWH F + VKR+ + S +V
Sbjct: 264 NGIMNKQEGEKAIMGVLDGSGEYKLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEV 323
Query: 582 KKMSPGS 588
++ GS
Sbjct: 324 SALNLGS 330
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 57/270 (21%)
Query: 7 DEVYAQITLLPEPSQN--EPTTP-DPCPADSPRPK--VHSFSKVLTASDTSTHGGFSVL- 60
+E++A ++L+P +P P DP P+ SP+ K + SF K LT +D + ++
Sbjct: 465 NELFATMSLIPVARDQAIQPQAPADPGPS-SPQVKTTLVSFVKPLTCTDAVKNRYRFIVP 523
Query: 61 -RKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKR 119
R+ A LP L +N+ P L KD+HG EW + ++ H+L++GW F + R
Sbjct: 524 KREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANR 578
Query: 120 LVAGDTFVFLRG-ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMF 178
LV GD VF+R ++GE ++G+R R P SV V+ A +
Sbjct: 579 LVTGDNVVFMRSMDSGERYMGLR---RTLKPEPVSVDE-------VIEAVWRAARLEPFE 628
Query: 179 VVYY-KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVVGVEDFSPH 237
V Y + +F++ L P G V+ +E+++
Sbjct: 629 VAYLSRQDGDEFVVPL--------------------------PNVGPQGKVIAIENYA-- 660
Query: 238 WKDSKWRSLKVQWDEPASITRPDRVSPWEI 267
S WR ++V+W A + R V+ W+I
Sbjct: 661 --TSIWRMIQVEWPSCAGMNR--YVNFWQI 686
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 2 AEQETDEVYAQITLLPEPSQNEP----TTPDPCPADSPRPKVHSFSKVLTASDTSTHGGF 57
A+ T+E YA ITL P + P A + ++ F K L +SD F
Sbjct: 80 ADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSSDAEYRDRF 139
Query: 58 SVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 117
+V A + PPL + Q L+ KDL G F + G R L W F
Sbjct: 140 AVPMDVAKDVFPPL--VDAKAVQPLIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFRDD 195
Query: 118 KRLVAGDTFVFL-RGENGELHVGVR 141
V GD+ +F+ R ++ EL+VGVR
Sbjct: 196 MDFVDGDSVIFMRRRDDDELYVGVR 220
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMML 557
KV G + GR+LD++ Y L EL MF ++GQL R+ W++V+ D E D++L
Sbjct: 7 VKVYKSG-SFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLL 65
Query: 558 VGDDPWHEFCNMVKRIFICSSQDVKKM 584
+GDDPW EF + V I I S Q+V++M
Sbjct: 66 LGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 119/280 (42%), Gaps = 41/280 (14%)
Query: 2 AEQETDEVYAQITLLPEPSQNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGGFSVLR 61
+ E+ E YA I+LLP S ++ T PA P F K L+ +D +++ VL
Sbjct: 82 VDAESGEAYATISLLPG-SHDDTTARRQVPAHG-EPGFRFFEKQLSPADVTSNA--LVLP 137
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG-----QPRRHLL-------TT 109
A LPPLD+ + +DL G + F HI+ + R++L
Sbjct: 138 AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLGDLGVNDND 197
Query: 110 GWSTFVTSKRLVAGDTFVFLR--------GENGELHVGVRCLARQQSS-MPSSVISSQSM 160
GW FV +KRL DT VF+R +GEL VGVR R + P +
Sbjct: 198 GWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK- 256
Query: 161 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLE---AVNNKFAVGMRYKMRFE 215
V++ + T F V Y PR T +F++S ++Y+ + F G +R
Sbjct: 257 ---VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN 313
Query: 216 GEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKVQWDEPAS 255
+ SGTV + P WR L+V WD+ AS
Sbjct: 314 PLQIAQ-SISGTVRTFDHLRP------WRMLEVDWDQAAS 346
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 120/291 (41%), Gaps = 55/291 (18%)
Query: 6 TDEVYAQITLLPEPS----QNEPTTPDPCPADSPRPKVHSFSKVLTASDTSTHGG----- 56
+D+ YA I+L P + P DP + F K L+ SD + +GG
Sbjct: 406 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQR---EFCFFDKKLSPSDAAANGGGSGAL 462
Query: 57 FSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQP--RR---HLLTTGW 111
F + + A E + P +L +L G W F H + RR H L GW
Sbjct: 463 FVIPKPSAAEHVLPR-------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 515
Query: 112 STFVTSKRLVAGDTFVFLRGE-NGELHVGVRCLARQQSSMPSSVISSQSMHLGVL-ATAS 169
S FV +KRL GDT +F+R GE VGVR + H G+L
Sbjct: 516 SAFVKAKRLCVGDTVIFMRRRPGGEPIVGVR----------------RKPHGGMLVGIPD 559
Query: 170 HAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFSGTVV 229
VA + V T++F++ + +E + A G R ++ +D RR V
Sbjct: 560 KHVADAWLDAV----GTAEFVVR-REEVEG-SPPLAPGTRVRLLMNPDDV-RRRSQPPVY 612
Query: 230 G-VEDFSPHWKDSKWRSLKVQWDE--PASITRPDRVSPWEIEPFVASATPN 277
G V D SKWR L+V WD P + T RV+ W+++P + P
Sbjct: 613 GTVRDVH---SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPVQLALPPQ 660
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 72.4 bits (176), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEG 553
+R+ KV G + GR+LD+T Y+ L EL MF ++GQL R+ W++V+ D E
Sbjct: 26 SRTFVKVYKSG-SFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDREN 84
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
D++L+GD PW EF N V I I S Q+V++M
Sbjct: 85 DVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 115
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMM 556
RS KV G ++ RA+D+ Y L EL MF++ GQL + W++V+TD+E D++
Sbjct: 31 RSYIKVYKLG-SITRAVDVNRFKDYTELRCELARMFNLDGQLDPKVGWQLVFTDNEDDLL 89
Query: 557 LVGDDPWHEFCNMVKRIFICSSQDV 581
LVGDDPW EF V+ I I + +V
Sbjct: 90 LVGDDPWEEFVRNVRGIRILTPAEV 114
>gi|226501382|ref|NP_001147149.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195607742|gb|ACG25701.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 543
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 116 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLAAQTSGPDGERQAVAGILNGGGE 175
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 176 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 217
>gi|357513517|ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355521069|gb|AET01523.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 271
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------------DIKGQ 537
K+ M GV +GR +D+ Y+ L ++++F +KG
Sbjct: 158 VKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGS 217
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+ + GSK
Sbjct: 218 LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSDLPAFNIGSK 269
>gi|356556539|ref|XP_003546582.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 320
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 536
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 197 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 256
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 257 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 309
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 508 AVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTDDEGDMMLVGDDPWHE 565
GR+LD+T Y L EL +MF I+G L R+ W++V+ D E D++L+GDDPW
Sbjct: 2 VCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEA 61
Query: 566 FCNMVKRIFICSSQDVKKMS 585
F N V I I S +DV+K+
Sbjct: 62 FVNNVWYIKILSPEDVQKLG 81
>gi|359482888|ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
Length = 364
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 23/111 (20%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 537
K+ M GV +GR +DLT Y+ L +DEL EE I G
Sbjct: 241 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITGL 300
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 301 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|297743183|emb|CBI36050.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKG 536
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 240 VKINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKHEEEKTITG 299
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + GS
Sbjct: 300 LLDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCLGS 351
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDE 552
S R+ KV G + GR+LD++ YD L EL +F ++G L R+ W++V+ D E
Sbjct: 50 STRTFVKVHKSG-SYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRE 108
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
D++L+GDDPW EF N V I I S +V
Sbjct: 109 NDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 509 VGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEF 566
+GRALDL GY L++EL+ +F I L+ ++W+ VY D+EGDM+LVGDDPW F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG-SEWQAVYVDNEGDMLLVGDDPWGVF 214
>gi|226531844|ref|NP_001150765.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
gi|195641652|gb|ACG40294.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 543
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|356550493|ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 346
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 23/113 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----------------------IKG 536
K+ M GV +GR +DL Y++L ++E+F I G
Sbjct: 223 VKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITG 282
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + GSK
Sbjct: 283 LLDGSGEFTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSK 335
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 257
>gi|413944729|gb|AFW77378.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 234
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 543
KV M GV +GR LDL GYD L ++ +F + G L+ +
Sbjct: 122 VKVNMDGVPIGRKLDLGGHAGYDTLTAAVDHLFRGLLSAQTSGPGGERQAVAGILNGGGE 181
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 182 YTLVYEDDEGDQMLVGDVPWQMFAATARRLRVLRSSDLNPSS 223
>gi|304308209|gb|ADL70417.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 63
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 26/89 (29%)
Query: 155 ISSQSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRF 214
IS+ M GV+A+ +A T+ MF V YKPR M+F
Sbjct: 1 ISANCMQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQF 34
Query: 215 EGEDSPERRFSGTVVGVEDFSPHWKDSKW 243
EG+D E+R+ GT++GV D SPHWKDS+W
Sbjct: 35 EGKDFSEKRYDGTIIGVNDMSPHWKDSEW 63
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 70.1 bits (170), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 71 LDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVF 128
LD P + ++AKD+HG W+F+HI+RG PRRHLL TGWS FV K G F
Sbjct: 13 LDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLCF 70
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 130 RGENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTM-FVVYYKPR--T 186
R N EL +GVR AR + S S + +A Q M F V Y PR +
Sbjct: 3 RNSNSELFIGVRRDARWNRNGERS---SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGS 59
Query: 187 SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGVEDFSPHWKDSKW 243
S F++ EA++ + GMR KM E EDS + F GTV V D P W+ S W
Sbjct: 60 SDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGP-WRGSLW 118
Query: 244 RSLKVQWDEPASITRPDRVSPWEIE 268
R L+V WDEP + RVSPW++E
Sbjct: 119 RMLQVTWDEPEVLQNVMRVSPWQVE 143
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F K +T SD + ++HA C P LD++ + L +D+ G WRF++ +
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVR 141
+ ++LT GWS FV K+L AGD F RG EL++ R
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWR 256
>gi|147798046|emb|CAN73899.1| hypothetical protein VITISV_004904 [Vitis vinifera]
Length = 559
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 29/129 (22%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----------------------DIKGQ 537
K+ M GV +GR +DLT Y+ L ++E+F I G
Sbjct: 393 KINMDGVPIGRKVDLTAYDSYEKLSSAVDELFRGLLAAQRDSSAGGIQTKQEEEKTITGL 452
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS-----PGSKLP- 591
L ++ +VY D+EGD +LVGD PWH F N VKR+ + S ++ + P S +P
Sbjct: 453 LDGSGEYTLVYEDNEGDRVLVGDVPWHMFVNTVKRLRVLKSSELSALCREFFDPHSLIPH 512
Query: 592 MFSIEGEDI 600
+F + G I
Sbjct: 513 IFGLNGGPI 521
>gi|255549816|ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
gi|223544864|gb|EEF46379.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
Length = 320
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-----------------EEMFDIKGQLHT 540
K+ M GV +GR +DL Y+ L +DEL EE I G L
Sbjct: 214 KINMDGVPIGRKVDLQAYDSYEKLSIAVDELFRGLLAAQRDSSAGTKQEEEKAITGVLDG 273
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++ +VY D+EGD MLVGD PWH F + VKR+ + S +V +S
Sbjct: 274 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSEVSALS 318
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDD 551
+S R+ TKV G +VGR+LD+ Y L EL +MF + + + W+IV+ D+
Sbjct: 27 SSQRTFTKVHKLG-SVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDN 85
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGEDI----LLSSDSA 607
E D +L+GDDPW +F N V+ I I S +V ++S + ++ + + L+SSDS
Sbjct: 86 ENDTLLLGDDPWEDFLNCVRSIKILSPSEVTQISQDQLKMLETVPVQHLQPQRLISSDSG 145
Query: 608 E 608
E
Sbjct: 146 E 146
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 75/176 (42%), Gaps = 65/176 (36%)
Query: 101 QPRRHLLTTGWS--TFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQ 158
QPR HL+T GWS T V+ K L + D +FL
Sbjct: 66 QPRWHLITIGWSILTIVSQKNLTSCDVVLFL----------------------------- 96
Query: 159 SMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 218
A+HA +F+I KY+ ++ N +G R+ MRFE D
Sbjct: 97 ---------ATHA----------------EFVIPYEKYITSIRNPICIGTRFIMRFEMND 131
Query: 219 SPERRFSGTVVGVEDFSPH-WKDSKWRSLKVQWDEPASIT-RPDRVSPWEIEPFVA 272
SPE R +G V GV D P+ W +SKW D + ++ +RVS WEI+P V+
Sbjct: 132 SPE-RCAGVVAGVYDLDPYRWPNSKWC------DGMSLVSDHQERVSLWEIDPSVS 180
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 494 TSNRSRTKVQM-QGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLH--TRTKWEIVYTD 550
+SN+++ V++ + +VGR+LD++ Y L +EL +MF I+G L R+ W++V+ D
Sbjct: 42 SSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVD 101
Query: 551 DEGDMMLVGDDPWHEFCNMVKRIFICS 577
E D++L+GDDPW F N V I I S
Sbjct: 102 KENDILLLGDDPWESFVNNVWYIKILS 128
>gi|297808601|ref|XP_002872184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318021|gb|EFH48443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 147
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%)
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
KE K+ K+ M+GV +GR ++L+ Y L ++++F K +
Sbjct: 39 KEEMKKRESDEEKELYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQ 98
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ +VY D EGD +LVGD PW F + VKR+ + + + +SP
Sbjct: 99 YTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSNASSLSP 141
>gi|15219761|ref|NP_171949.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
gi|11131318|sp|Q38830.1|IAA12_ARATH RecName: Full=Auxin-responsive protein IAA12; AltName:
Full=Indoleacetic acid-induced protein 12; AltName:
Full=Protein BODENLOS
gi|12083206|gb|AAG48762.1|AF332398_1 auxin-induced protein, IAA12 [Arabidopsis thaliana]
gi|972927|gb|AAC49053.1| IAA12 [Arabidopsis thaliana]
gi|2494122|gb|AAB80631.1| Match to Arabidopsis IAA12 (gb|U18414) [Arabidopsis thaliana]
gi|17529012|gb|AAL38716.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|20465451|gb|AAM20185.1| auxin-induced protein IAA12 [Arabidopsis thaliana]
gi|332189592|gb|AEE27713.1| auxin-responsive protein IAA12 [Arabidopsis thaliana]
Length = 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 458 AADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTT 517
A + DG+ + K E K ++V+PK KV M GV +GR +D+
Sbjct: 95 AEEGDGEKKVVKN-DELKDVSMKVNPK---------VQGLGFVKVNMDGVGIGRKVDMRA 144
Query: 518 LVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIVYTDDEGDMMLVGDDPWHE 565
Y++L LEEMF + G L + + + Y D EGD MLVGD PW
Sbjct: 145 HSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRM 204
Query: 566 FCNMVKRIFICSSQDVKKMSP 586
F N VKR+ I + + ++P
Sbjct: 205 FINSVKRLRIMGTSEASGLAP 225
>gi|297843264|ref|XP_002889513.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
gi|297335355|gb|EFH65772.1| hypothetical protein ARALYDRAFT_470436 [Arabidopsis lyrata subsp.
lyrata]
Length = 239
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 547
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTSREKVKPLRLLDGSSDFVLT 186
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
Y D EGD MLVGD PW F N VKR+ I S + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGSSEASGLAP 225
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 178 FVVYYKPRT---SQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERR-FSGTV--VGV 231
F V Y PR S F++ A+ + GMR KM E EDS F GTV G+
Sbjct: 25 FDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGL 84
Query: 232 EDFSPHWKDSKWRSLKVQWDEPASITRPDRVSPWEIEPFVASATPNL 278
D S W+ S WR L++ WDEP + RVSPW++E FVA+ TP L
Sbjct: 85 PD-SGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVE-FVAT-TPQL 128
>gi|357454777|ref|XP_003597669.1| Auxin-responsive protein IAA18 [Medicago truncatula]
gi|355486717|gb|AES67920.1| Auxin-responsive protein IAA18 [Medicago truncatula]
Length = 269
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 24/113 (21%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 536
K+ M GV +GR +DL YD+L ++++F I G
Sbjct: 151 KINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITG 210
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ + G++
Sbjct: 211 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTLGTR 263
>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 174
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 82 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 141
Query: 560 DDPWHEFCNMVKRIFICSSQDVKKMSP 586
D PW F + VKR+ + + +SP
Sbjct: 142 DVPWEMFVSTVKRLHVLKTSHAFSLSP 168
>gi|304322554|gb|ADL70764.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 158
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 560 DDPWHEFCNMVKRIFICSSQDVKKMSP 586
D PW F + VKR+ + + +SP
Sbjct: 126 DVPWEMFVSTVKRLHVLKTSHAFSLSP 152
>gi|224099985|ref|XP_002311698.1| predicted protein [Populus trichocarpa]
gi|222851518|gb|EEE89065.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 441 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 497
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 543
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLD 197
Query: 544 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ + Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 198 GLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAP 244
>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
Full=Indoleacetic acid-induced protein 28
gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
Length = 175
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 560 DDPWHEFCNMVKRIFICSSQDVKKMSP 586
D PW F + VKR+ + + +SP
Sbjct: 143 DVPWEMFVSTVKRLHVLKTSHAFSLSP 169
>gi|125554220|gb|EAY99825.1| hypothetical protein OsI_21816 [Oryza sativa Indica Group]
Length = 183
Score = 67.0 bits (162), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 555
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 556 MLVGDDPWHEFCNMVKRIFI 575
MLVGD PW F VKR+ I
Sbjct: 162 MLVGDVPWEAFAKSVKRLKI 181
>gi|16610207|dbj|BAB71765.1| IAA/AUX protein [Physcomitrella patens]
Length = 484
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 541
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 348 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 407
Query: 542 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 408 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 467
Query: 583 KMSPGSKLP 591
++P + P
Sbjct: 468 NLAPKNADP 476
>gi|168044918|ref|XP_001774926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|16610209|dbj|BAB71766.1| IAA/AUX protein [Physcomitrella patens]
gi|162673673|gb|EDQ60192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR--- 541
Q K + +S+ + K+ M GV GR +DL T YD L LE+MF I GQ
Sbjct: 367 QRKGASTSSSGNLVKIYMDGVPFGRKVDLKTNDSYDKLYSMLEDMFQQYISGQYCGGRSS 426
Query: 542 -------------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
+++ ++Y D EGD MLVGD PW F N VKR+ I +
Sbjct: 427 SSGESHWVASSRKLNFLEGSEYVLIYEDHEGDSMLVGDVPWELFVNAVKRLRIMKGSEQV 486
Query: 583 KMSPGSKLP 591
++P + P
Sbjct: 487 NLAPKNADP 495
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 33 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 81
DS RP K H F KV+T SD + ++HA P LD + +
Sbjct: 13 DSERPRGGVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGG 72
Query: 82 -----LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGE 135
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG GE
Sbjct: 73 GKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
Length = 239
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-DIKGQ-----------LHTRTKWEIV 547
KV M GV +GR +D+ Y++L LEEMF + G L + + +
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLT 186
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
Y D EGD MLVGD PW F N VKR+ I + + ++P
Sbjct: 187 YEDKEGDWMLVGDVPWRMFINSVKRLRIMGTSEASGLAP 225
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 183 KPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDSPERRFS-----GTVVGVEDFSP- 236
+ +S+F I NK+L++++ F+ GMR+KM FE ED+ ERRF+ G + GV + P
Sbjct: 27 RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86
Query: 237 HWKDSKWRSLKVQW 250
W SKW+ L V W
Sbjct: 87 RWPGSKWKCLLVSW 100
>gi|118484337|gb|ABK94046.1| unknown [Populus trichocarpa]
Length = 303
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 453 STISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVA 508
S +S A + + D K EK + + + K ++ T N KV M GV
Sbjct: 137 SLVSQAKAARAEED--KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVP 194
Query: 509 VGRALDLTTLVGYDHLIDELEEMF--------DIKGQ---------LHTRTKWEIVYTDD 551
+GR +DL Y+ L LEEMF I GQ L +++ + Y D
Sbjct: 195 IGRKVDLNAHACYETLAQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDK 254
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 255 EGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 289
>gi|351722464|ref|NP_001236733.1| uncharacterized protein LOC100305535 [Glycine max]
gi|255625835|gb|ACU13262.1| unknown [Glycine max]
Length = 189
Score = 66.2 bits (160), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 424 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 483
G+E+ P ++P + + + S I A D + S + K + V P
Sbjct: 7 GLEITTELRLGLPGGELPGKNEKIKKRVFSEIQAHDDDENSSSEQDRKIQTKNQVVGWPP 66
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
S K++ + + KV M G R +DL GY L+ LE+ F G
Sbjct: 67 VCSYRKKNTVNETKMYVKVSMDGAPFLRKIDLAMHKGYSELVLALEKFFGCYGIREALKD 126
Query: 544 WE-----IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK--KMSPGSKLPMFSIE 596
E +Y D +GD MLVGD PW F KR+ I D K + P L F IE
Sbjct: 127 AENAEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKGSDAKGFDLQPKGSLKGF-IE 185
Query: 597 G 597
G
Sbjct: 186 G 186
>gi|110736486|dbj|BAF00211.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 58
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 36/44 (81%)
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIEGE 598
+MLVGDDPW EFCNMVKRIFI S ++VKKM+PG++L M E E
Sbjct: 1 IMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVE 44
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + Q L +D G WRF++
Sbjct: 90 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYS 148
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 149 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 182
>gi|224107521|ref|XP_002314509.1| predicted protein [Populus trichocarpa]
gi|222863549|gb|EEF00680.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 469 KEFKEKKQEQVQVSPKESQSKQSCLTSNRSR----TKVQMQGVAVGRALDLTTLVGYDHL 524
K EK + + + K ++ T N KV M GV +GR +DL Y+ L
Sbjct: 124 KGIGEKDKSKENLKKKICNGNKTNATGNEKGHLGFVKVNMDGVPIGRKVDLNAHACYETL 183
Query: 525 IDELEEMF--------DIKGQ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFC 567
LEEMF I GQ L +++ + Y D EGD MLVGD PW F
Sbjct: 184 AQALEEMFFRSTTTINSIGGQKPLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFL 243
Query: 568 NMVKRIFICSSQDVKKMSP 586
VKR+ I + + ++P
Sbjct: 244 TSVKRLRIMRTSEANGLAP 262
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 19/192 (9%)
Query: 3 EQETDEVYAQITLLPEPSQNEPTTPDPCPADS-PRPKVHSFSKVLTASDTSTHGGFSVLR 61
++E + +Y Q L + P+ S + H F KVLT SD V +
Sbjct: 21 QEEDNNLYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDKVLTPSDVGKLNRLVVPK 80
Query: 62 KHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLV 121
+HA P + +L +D G W+F++ + G + +++T GWS FV + RL
Sbjct: 81 QHAERFFPA----AGAGSTQLCFQDRGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLA 136
Query: 122 AGDTFVFLRGENGELHVGVRCLARQQSSMPSS--------------VISSQSMHLGVLAT 167
AGDT F R G + R R++ + S VI + +M+ G
Sbjct: 137 AGDTVTFSRSGGGRYFIEYRHCQRRRRDVDISFGDAATVPAWPRPIVIGTAAMNNGGATV 196
Query: 168 ASHAVATQTMFV 179
AS +A + V
Sbjct: 197 ASATIAGHDIEV 208
>gi|365818545|gb|AEX00361.1| IAA19 [Solanum lycopersicum]
Length = 192
Score = 66.2 bits (160), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKG---QLHT 540
K S + + ++N+ KV M G R +DL+T GYD L+ LE++FD G L
Sbjct: 72 KNSFNGREAESNNKMYVKVSMDGAPFLRKVDLSTHKGYDQLVMALEKLFDCYGIGEALED 131
Query: 541 RTKWEIV--YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
K E V Y D +GD MLVGD PW F KR+ I + K + G++
Sbjct: 132 ADKSEFVPIYEDKDGDWMLVGDVPWIMFSESCKRLRIMKRSEAKVIGLGAR 182
>gi|302398571|gb|ADL36580.1| ARF domain class transcription factor [Malus x domestica]
Length = 325
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 536
K+ M GV +GR +DL Y L +DEL EE +I G
Sbjct: 207 VKINMDGVPIGRKVDLGAYDSYQKLSSAVDELFRGLLAAQRESCNGGTKNKQEEEKEITG 266
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKM 584
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ +
Sbjct: 267 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAL 314
>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
Length = 249
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 15/133 (11%)
Query: 468 AKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDE 527
A+E +E +++V+ + +K++ KV M GVA+GR +DL Y++L
Sbjct: 102 AREEEEAGKKKVKDDETKDVTKKANGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQT 161
Query: 528 LEEMF--------DIKGQ-------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKR 572
LE+MF + GQ L +++ + Y D EGD MLVGD PW F VKR
Sbjct: 162 LEDMFFRNNPGTIGLTGQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFITSVKR 221
Query: 573 IFICSSQDVKKMS 585
+ + + + ++
Sbjct: 222 LRVMKTSEANGLA 234
>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---------IKGQLHTRTKWEIVYTDD 551
KV M+G+++GR LDL GYD L+ L MF + G H+ + Y D
Sbjct: 109 KVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSGKYHILTYEDK 168
Query: 552 EGDMMLVGDDPWHEFCNMVKRIFI 575
EGD M+VGD PW F VKR+ I
Sbjct: 169 EGDWMMVGDVPWEMFLTTVKRLKI 192
>gi|302398577|gb|ADL36583.1| ARF domain class transcription factor [Malus x domestica]
Length = 306
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 441 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 500
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 545
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTTIGGDTEQAKKPSKLLDGSSEFV 251
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|225437764|ref|XP_002281145.1| PREDICTED: auxin-responsive protein IAA4 [Vitis vinifera]
gi|297744081|emb|CBI37051.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------DIKGQLHTRTKWEIVYTDDE 552
KV M+G+ +GR LDL GY LI L+ MF ++ G LH+ + Y D E
Sbjct: 87 VKVYMEGIPIGRKLDLFAHDGYHALIRTLDHMFSTTILWAEVDGVLHSEKCHVLTYEDKE 146
Query: 553 GDMMLVGDDPWHEFCNMVKRIFI 575
GD M+VGD PW F VKR+ I
Sbjct: 147 GDWMMVGDVPWELFLTTVKRLKI 169
>gi|399894421|gb|AFP54302.1| ARF domain class transcription factor [Pyrus x bretschneideri]
Length = 306
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 441 PVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRT 500
P+S+ + +A A+ D + + ++ K+ ++++ V K + ++ L
Sbjct: 138 PISAARMNSLVNQAKTARAEDD--TAVGEKSKDTSKKKINVGSKTTVKEKGHL----GFV 191
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQ----------LHTRTKWE 545
KV M G+ +GR +DL Y+ L LEEMF I G L +++
Sbjct: 192 KVNMDGIPIGRKVDLNAHSCYETLAQTLEEMFISPTTAIGGDTEQAKKPSKLLDGSSEFV 251
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 252 LTYEDKEGDWMLVGDVPWGMFLGSVKRLRIMRTSEANGLAP 292
>gi|357134358|ref|XP_003568784.1| PREDICTED: auxin-responsive protein IAA16-like [Brachypodium
distachyon]
Length = 239
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 28/114 (24%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------------- 533
K+ M GV +GR +DL GY L D ++ +F
Sbjct: 112 VKINMDGVPIGRKVDLKAHGGYGKLADAVDHLFRGLLAAQRDVNPAIAVGQSSCAGEKNT 171
Query: 534 --IKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
I G L ++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 172 AAITGLLDGSGEYTLVYEDDEGDQMLVGDVPWDMFVATAKRLRVLRSSDLNASS 225
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 90
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ +++T GWS FV K+L AGDT F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|304308205|gb|ADL70415.1| truncated auxin response factor 13 [Arabidopsis thaliana]
Length = 59
Score = 65.5 bits (158), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 26/84 (30%)
Query: 160 MHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVNNKFAVGMRYKMRFEGEDS 219
M GV+A+ +A T+ MF V YKPR M+FEG+D
Sbjct: 2 MQHGVIASVVNAFKTKCMFNVVYKPR--------------------------MQFEGKDF 35
Query: 220 PERRFSGTVVGVEDFSPHWKDSKW 243
E+++ GT++GV D SPHWKDS+W
Sbjct: 36 SEKKYDGTIIGVNDMSPHWKDSEW 59
>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
Full=Indoleacetic acid-induced protein 13
gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 247
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 545
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 133 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 192
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 193 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 238
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KVLT SD + ++HA E PL+ NQ+ + +D +G WRF++ +
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHA-ENFFPLEDNQNGTVLDF--QDKNGKMWRFRYSYW 85
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ +++T GWS FV K+L AGDT F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
Length = 246
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 545
KV M GVA+GR +DL Y++L LE+MF + Q L +++
Sbjct: 132 KVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFV 191
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ Y D EGD MLVGD PW F N VKR+ + + + ++ ++ P
Sbjct: 192 LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEP 237
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 141
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRCLARQQSSMPSS 153
+ + +++T GWS FV KRL AGDT F RG L + R + S P
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHR 201
Query: 154 VISSQSMHLGVLATASHAVATQTMFVVYYKP 184
++ +H+ LA+ ++ P
Sbjct: 202 MLPRLPLHMPPLASPYGYGPWGGGAGGFFVP 232
>gi|218187663|gb|EEC70090.1| hypothetical protein OsI_00719 [Oryza sativa Indica Group]
Length = 237
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 21/101 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 542
K+ M GV +GR +DLT GY L ++++F +G L ++
Sbjct: 120 VKINMDGVPIGRKVDLTAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 177
Query: 543 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 178 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 218
>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
Length = 158
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMM 556
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 133
Query: 557 LVGDDPWHEFCNMVKRIFI 575
+VGD PW F V+R+ I
Sbjct: 134 MVGDIPWDMFLETVRRLKI 152
>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 157
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 557
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KVLT SD V ++HA P + +L +D G W+F++ +
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPA-----AGAGTQLCFQDCGGALWQFRYSYW 109
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENG 134
G + +++T GWS FV + RL AGDT F RG G
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGG 144
>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 557
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 151
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 557
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 68 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 127
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD PW F V+R+ I
Sbjct: 128 VGDIPWDMFLETVRRLKI 145
>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 557
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 74 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 133
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD PW F V+R+ I
Sbjct: 134 VGDIPWDMFLETVRRLKI 151
>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWE--IVYTDDEGDMML 557
KV M+GV +GR LDL GY+ L++ L MFD R + + Y D +GD M+
Sbjct: 75 VKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDGDWMM 134
Query: 558 VGDDPWHEFCNMVKRIFI 575
VGD PW F V+R+ I
Sbjct: 135 VGDIPWDMFLETVRRLKI 152
>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
Length = 1203
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 132 ENGELHVGVRCLARQQSSMPSSVISSQSMHLGVLATASHAVATQTMFVVYYKPRT--SQF 189
E L GVR RQQ+S+PSSV+S+ S+H+GVLA SHA A ++ F ++Y PR S+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559
Query: 190 IISLN 194
I S N
Sbjct: 560 ISSAN 564
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 524 LIDE--LEEMFDIKGQLHTR--TKWEIVYTDDEGDMMLVGDDPWHEFCNMVK 571
L++E +E M ++ L+ + W++VY D E D++LVGDDPW+ ++++
Sbjct: 985 LVNEKAIECMLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPWNTMGSILQ 1036
>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMM 556
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 133
Query: 557 LVGDDPWHEFCNMVKRIFI 575
+VGD PW F V+R+ I
Sbjct: 134 MVGDIPWDMFLETVRRLKI 152
>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
Length = 138
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMM 556
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M
Sbjct: 55 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 113
Query: 557 LVGDDPWHEFCNMVKRIFI 575
+VGD PW F V+R+ I
Sbjct: 114 MVGDIPWDMFLETVRRLKI 132
>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
Full=Indoleacetic acid-induced protein 31
gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
Length = 158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIVYTDDEGDMM 556
KV M+GV +GR LDL GY+ L++ L MFD I G R + Y D +GD M
Sbjct: 75 VKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRKHHVLTYEDKDGDWM 133
Query: 557 LVGDDPWHEFCNMVKRIFI 575
+VGD PW F V+R+ I
Sbjct: 134 MVGDIPWDMFLETVRRLKI 152
>gi|110631502|gb|ABG81096.1| AUX/IAA-like protein [Pelargonium x hortorum]
Length = 192
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 455 ISAAADSDG-KSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRAL 513
S A D D K+ I+ K + QV P S++S + N KV + G R +
Sbjct: 39 FSEAIDIDKTKTSISGSAKSPPKTQVVGWPPVKASRKSVVARNCKYVKVAVDGAPYLRKV 98
Query: 514 DLTTLVGYDHLIDELEEMFD---IKGQLHTRTKWEIV--------YTDDEGDMMLVGDDP 562
DL Y L++ LEE+F I+ L+ R ++V Y D +GD MLVGD P
Sbjct: 99 DLEMYGSYQQLLEALEELFSCLTIRNCLNERKLMDLVNGVEYVPTYEDKDGDWMLVGDVP 158
Query: 563 WHEFCNMVKRIFICSSQDVKKMSP 586
W F KR+ + S D ++P
Sbjct: 159 WKMFVESCKRVRLMKSSDAVGLAP 182
>gi|429326560|gb|AFZ78620.1| hypothetical protein [Populus tomentosa]
Length = 291
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 26/166 (15%)
Query: 441 PVSSLTTEGHIISTISAAADSD---GKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNR 497
P+ + + +A A+ D G+ DI+K+ +KK + S S +
Sbjct: 83 PIRAYRMNSLVNQAKAARAEEDKGIGEKDISKDNLKKK-----ICNGNKTSAPSNEKGHL 137
Query: 498 SRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK------ 543
KV M G+ +GR +DL Y+ L LEEMF I G+ TK
Sbjct: 138 GFVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFLRSATTINSIGGEKRQVTKPSKLLD 197
Query: 544 ----WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+ + Y D EGD MLVGD PW F N VKR+ I + + +
Sbjct: 198 GLSEFVLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLG 243
>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 164
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 79 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 138
Query: 560 DDPWHEFCNMVKRIFICSS 578
D PW F + VKR+ + +
Sbjct: 139 DVPWEMFVSTVKRLHVLKT 157
>gi|304322558|gb|ADL70766.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 149
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 64 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 123
Query: 560 DDPWHEFCNMVKRIFICSS 578
D PW F + VKR+ + +
Sbjct: 124 DVPWEMFVSTVKRLHVLKT 142
>gi|304322552|gb|ADL70763.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|304322564|gb|ADL70769.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 151
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 66 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 125
Query: 560 DDPWHEFCNMVKRIFICSS 578
D PW F + VKR+ + +
Sbjct: 126 DVPWEMFVSTVKRLHVLKT 144
>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
Length = 168
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEGDMMLVG 559
K+ M+GV +GR ++L+ Y L ++++F K ++ +VY D EGD +LVG
Sbjct: 83 VKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVG 142
Query: 560 DDPWHEFCNMVKRIFICSS 578
D PW F + VKR+ + +
Sbjct: 143 DVPWEMFVSTVKRLHVLKT 161
>gi|297605239|ref|NP_001056915.2| Os06g0166500 [Oryza sativa Japonica Group]
gi|75252070|sp|Q5VRR0.1|IAA20_ORYSJ RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|55296040|dbj|BAD67602.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|55296147|dbj|BAD67865.1| proliferating cell nuclear antigen-like [Oryza sativa Japonica
Group]
gi|125596172|gb|EAZ35952.1| hypothetical protein OsJ_20255 [Oryza sativa Japonica Group]
gi|215734885|dbj|BAG95607.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676750|dbj|BAF18829.2| Os06g0166500 [Oryza sativa Japonica Group]
Length = 183
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTK---WEIVYTDDEGDM 555
KV+M+G+A+GR LDL+ L Y L+D L MF Q H R + + + Y D EGD
Sbjct: 102 KVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGEGDW 161
Query: 556 MLVGDDPWHEFCNMVKRIFI 575
M VGD PW F VKR+ I
Sbjct: 162 MQVGDVPWEAFAKSVKRLKI 181
>gi|356545900|ref|XP_003541371.1| PREDICTED: auxin-responsive protein IAA11-like [Glycine max]
Length = 380
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHTR 541
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H++
Sbjct: 258 KVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSK 317
Query: 542 -----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 318 LLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAP 367
>gi|326530302|dbj|BAJ97577.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 64.3 bits (155), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 475 KQEQVQVSPKESQSKQSCLTSNRS--RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF 532
K+ V P S ++C KV+ +G A+GR +DL+ Y L+ L MF
Sbjct: 71 KKALVGWPPVSSARSRACGAGGGGGRHVKVRKEGAAIGRKVDLSLHGSYADLLATLARMF 130
Query: 533 -DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
D G LH ++ + Y D +GD MLVGD PW +F VKR+ I
Sbjct: 131 PDPAGCLHAESEMVVTYEDADGDWMLVGDVPWDDFARSVKRLKI 174
>gi|449436896|ref|XP_004136228.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
gi|449502842|ref|XP_004161758.1| PREDICTED: auxin-responsive protein IAA18-like [Cucumis sativus]
Length = 358
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 59/132 (44%), Gaps = 26/132 (19%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHL---IDEL- 528
E +E VQ E+ SK S + + KV M GV +GR L+L YD L IDEL
Sbjct: 225 ESSKETVQ---DENGSKLSDCYNGQMFVKVCMDGVPIGRKLNLQAYNSYDQLSAGIDELF 281
Query: 529 -------------------EEMFDIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNM 569
EE + H + +VY D+EGD MLVGD PW F +
Sbjct: 282 HSLLAAQRNYLAAEDGRKMEETTSVSDSKHKNGLYTLVYYDNEGDRMLVGDVPWKMFVST 341
Query: 570 VKRIFICSSQDV 581
VKR+ + S V
Sbjct: 342 VKRLRVLKSSVV 353
>gi|125559895|gb|EAZ05343.1| hypothetical protein OsI_27548 [Oryza sativa Indica Group]
Length = 246
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 545
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|356536854|ref|XP_003536948.1| PREDICTED: auxin-responsive protein IAA11 [Glycine max]
Length = 373
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 24/111 (21%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHT 540
KV M G+ +GR +DL+ Y+ L LE+MF+ I G+ H+
Sbjct: 250 VKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGFIIGGERHS 309
Query: 541 R-----TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ +K+ + Y D EGD MLVGD PW F + V+R+ I + + ++P
Sbjct: 310 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAP 360
>gi|147838466|emb|CAN74317.1| hypothetical protein VITISV_013837 [Vitis vinifera]
Length = 206
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 487 QSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTR---- 541
Q K++ R+ KV M G R +DL GY L+ LEEMF GQ R
Sbjct: 99 QPKKTEAEEGRTYLKVSMDGAPYLRKIDLKVYKGYPELLKALEEMFKFSVGQYSEREGYN 158
Query: 542 -TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
+++ Y D +GD MLVGD PW+ F + KR+ I + + +
Sbjct: 159 GSEYAPTYEDKDGDWMLVGDVPWNMFISSCKRLRIMKGSEARGLG 203
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 497 RSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHT--RTKWEIVYTDDEGD 554
R+ KV G + GR+LD++ Y L EL +F ++ +L R+ ++V+ D E D
Sbjct: 52 RTFVKVHKMG-SFGRSLDISQFSSYQELRSELARLFGLENELKDSPRSGSQLVFVDREND 110
Query: 555 MMLVGDDPWHEFCNMVKRIFICSSQDV 581
++L+GDDPW EF V I I S Q+V
Sbjct: 111 VLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|115474429|ref|NP_001060811.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|88911333|sp|P0C128.1|IAA25_ORYSJ RecName: Full=Auxin-responsive protein IAA25; AltName:
Full=Indoleacetic acid-induced protein 25
gi|113622780|dbj|BAF22725.1| Os08g0109400 [Oryza sativa Japonica Group]
gi|125597174|gb|EAZ36954.1| hypothetical protein OsJ_21291 [Oryza sativa Japonica Group]
gi|215687000|dbj|BAG90814.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 246
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHTR------------TKWE 545
KV ++G AVGR +DL YD L L+ MF + + TR ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+VY D+EGD MLVGD PW F VKR++I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>gi|302763986|ref|XP_002965414.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
gi|300166228|gb|EFJ32834.1| hypothetical protein SELMODRAFT_167506 [Selaginella moellendorffii]
Length = 409
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
K+ ++ + S Q+ +SN KV M G+ +GR +DL + Y L L++MF
Sbjct: 272 KQAAELATPDQGSNGGQAAASSNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 331
Query: 534 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 332 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 391
Query: 577 SSQDV 581
D
Sbjct: 392 KGSDA 396
>gi|226504822|ref|NP_001149993.1| LOC100283620 [Zea mays]
gi|195635913|gb|ACG37425.1| IAA6 - auxin-responsive Aux/IAA family member [Zea mays]
gi|414880576|tpg|DAA57707.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 1 [Zea
mays]
gi|414880577|tpg|DAA57708.1| TPA: IAA6-auxin-responsive Aux/IAA family member isoform 2 [Zea
mays]
Length = 357
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 485 ESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ----- 537
E+ K+ K+ M G+ +GR +DL Y+ L ++E+F ++ Q
Sbjct: 222 EASRKEKPACKKNPLVKINMDGIPIGRKVDLAAYDSYERLSLGVKELFHGFLQAQKDMSP 281
Query: 538 ---------LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGS 588
L ++ +VY D+EGD MLVGD PW+ F + KR+ + S ++ K G+
Sbjct: 282 TAGKIFSQLLDGSGEYTLVYEDNEGDRMLVGDVPWNVFVSTAKRLRVLRSSELAKGLVGT 341
Query: 589 KLPMFSI 595
+ P ++
Sbjct: 342 RPPQIAV 348
>gi|294462071|gb|ADE76589.1| unknown [Picea sitchensis]
Length = 86
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Query: 540 TRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFS 594
+ T +++YTD+E DMMLVGDDPW EFCN+ +I I + +V+KM+P MFS
Sbjct: 2 SNTGPQVLYTDNEDDMMLVGDDPWQEFCNIACKILIYTHDEVQKMTPS----MFS 52
>gi|242087139|ref|XP_002439402.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
gi|241944687|gb|EES17832.1| hypothetical protein SORBIDRAFT_09g005830 [Sorghum bicolor]
Length = 242
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD----------------IKGQLHTRT- 542
KV M GV +GR LDL GYD L ++ +F I G L+
Sbjct: 126 VKVNMDGVPIGRKLDLGAHAGYDTLSAAVDHLFRGLLAAQASGSGGEQQPIAGILNGGGG 185
Query: 543 ---KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++ +VY DDEGD MLVGD PW F +R+ + S D+ S
Sbjct: 186 GGREYTLVYEDDEGDQMLVGDVPWPMFIASARRLRVLRSSDLNPSS 231
>gi|302822822|ref|XP_002993067.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
gi|300139159|gb|EFJ05906.1| hypothetical protein SELMODRAFT_187180 [Selaginella moellendorffii]
Length = 344
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 543
KV M GV +GR ++L T Y+ L LEEMF I GQ L + TK
Sbjct: 224 VKVYMDGVPIGRKVNLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 283
Query: 544 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 284 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 332
>gi|224142858|ref|XP_002324753.1| predicted protein [Populus trichocarpa]
gi|222866187|gb|EEF03318.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 483 PKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF---------- 532
PKE S + N K+ M+GV +GR ++L Y+ L ++E+F
Sbjct: 108 PKEGSSLKPDSFRNDLFVKINMEGVPIGRKINLNAYDSYEKLSVAIDELFRGLLAETADP 167
Query: 533 --DIK--------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
D K G + ++ +VY D+EGD +LVGD PWH F + KR+ + S ++
Sbjct: 168 RNDKKVKEANANAGSVSGSGEYTLVYEDNEGDRILVGDVPWHMFVSTAKRLRVLKSTEI 226
>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 537
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|356522896|ref|XP_003530078.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
Length = 219
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 37/127 (29%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIK------------------- 535
K+ M GVA+GR +D+ Y+ L ++E+F ++K
Sbjct: 91 VKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIASSQCCSGQRDSCAG 150
Query: 536 -------------GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
G L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 151 GIQNKEQEEKSNTGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 210
Query: 583 KMSPGSK 589
+ GSK
Sbjct: 211 AFTLGSK 217
>gi|242075446|ref|XP_002447659.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
gi|241938842|gb|EES11987.1| hypothetical protein SORBIDRAFT_06g011767 [Sorghum bicolor]
Length = 74
Score = 63.5 bits (153), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 207 GMRYKMRFEGEDSPERRFSGTVVGVEDFSPHWKDSKWRSLKV 248
G+R++MRFEGE++ ERRF+GT+V E+ P W DS WR LKV
Sbjct: 15 GVRFRMRFEGEEALERRFTGTIVRCENLDPLWPDSSWRYLKV 56
>gi|365818553|gb|AEX00365.1| IAA26 [Solanum lycopersicum]
Length = 287
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 24/113 (21%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD------------------------IKG 536
K+ M G+ +GR +DL Y L ++++F I G
Sbjct: 172 KINMDGIPIGRKVDLKAYDSYHKLSSAVDQLFRGLVAAQNDSSAGGNNEKKEDEEKAISG 231
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
L ++ +VY D+EGD MLVGD PWH F + VKR+ + S ++ ++ +K
Sbjct: 232 LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSTLTRATK 284
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KVLT SD + ++HA P L+ NQ+ + +D +G WRF++ +
Sbjct: 32 HMFDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQNGTVLDF--QDRNGKMWRFRYSYW 88
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ +++T GWS FV K+L AGDT F RG
Sbjct: 89 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|357139461|ref|XP_003571300.1| PREDICTED: auxin-responsive protein IAA25-like [Brachypodium
distachyon]
Length = 245
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 16/93 (17%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-----DIKGQLHTRTKWE--------- 545
KV ++G AVGR ++L GY L L+ MF D G++ TR E
Sbjct: 146 VKVNLEGYAVGRKINLAAHSGYASLSAALQSMFHGFLSDGYGRIATRDDEEDQLGMMIKN 205
Query: 546 --IVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
++Y D+EGD MLVGD PW F VKR++I
Sbjct: 206 YILLYEDNEGDRMLVGDVPWEMFIASVKRLYIA 238
>gi|357139129|ref|XP_003571137.1| PREDICTED: auxin-responsive protein IAA7-like [Brachypodium
distachyon]
Length = 274
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 22/103 (21%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL-------------------EEMFDIKGQL 538
K+ M G+ +GR +DLT L Y+ L +D+L +E+ I G L
Sbjct: 156 KINMDGIPIGRKIDLTALDSYEKLCVAVDKLFRHLLAAQNDPPAAGTECTQEVVAISGLL 215
Query: 539 HTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 216 DGTGEYTLVYEDYEGDRVLVGDIPWGMFVSSVKRLRVLKTSDL 258
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYS 154
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|297821108|ref|XP_002878437.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
gi|297324275|gb|EFH54696.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 63.2 bits (152), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 489 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 542
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + ++ +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEEMCSEK 133
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|195637724|gb|ACG38330.1| IAA16 - auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 543
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 544 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
Length = 289
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 537
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
Length = 289
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 23/104 (22%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 537
K+ M G+ +GR +DL+ L YD L +D+L +E I G
Sbjct: 164 KINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKECSQEEVAISGL 223
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 224 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267
>gi|302788514|ref|XP_002976026.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
gi|300156302|gb|EFJ22931.1| hypothetical protein SELMODRAFT_450582 [Selaginella moellendorffii]
Length = 410
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 474 KKQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD 533
K+ ++ + S Q+ ++N KV M G+ +GR +DL + Y L L++MF
Sbjct: 273 KQAAELATPDQGSNGGQAAASNNSLFVKVYMDGLPIGRKVDLDSNNSYVKLSSALKDMFS 332
Query: 534 --IKGQLHTR---------------TKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFIC 576
+ GQ ++ T++ + Y D +GD+MLVGD PW F VKR+ I
Sbjct: 333 GFVSGQPMSKQKSSGDVRSLFDGYETEYVLTYEDKDGDLMLVGDVPWRMFAATVKRLRIM 392
Query: 577 SSQDV 581
D
Sbjct: 393 KGSDA 397
>gi|226508838|ref|NP_001145863.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
gi|219884739|gb|ACL52744.1| unknown [Zea mays]
gi|413949356|gb|AFW82005.1| IAA16-auxin-responsive Aux/IAA family member [Zea mays]
Length = 228
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 18/100 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------------DIKGQLHTRTK 543
KV M GV +GR LDL GYD L ++ +F + G L
Sbjct: 115 VKVNMDGVPIGRKLDLAAHAGYDTLSAAVDSLFRGLFAAQAAGPGGEQQAVAGILSGGGG 174
Query: 544 WE--IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
E +VY DDEGD MLVGD PW F +R+ + S D+
Sbjct: 175 GEHTLVYEDDEGDQMLVGDVPWPMFVATARRLRVLKSSDL 214
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYS 94
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG----ENGELHVGVRC 142
+ + +++T GWS FV KRL AGDT F RG L + RC
Sbjct: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRC 143
>gi|296083735|emb|CBI23724.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 451 IISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGV 507
+++ A A D K+D + K ++ ++ P +K + + KV M G+
Sbjct: 114 LVNQAKALAAEDDKADSEND---KFKDTLKKKPYTGSNKNNSTVKEKGHLGFVKVNMDGL 170
Query: 508 AVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHTRTKWEIV 547
+GR +DL Y L LE+MF D+ KGQ L +++ +
Sbjct: 171 PIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDGSSEFVLT 230
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 231 YEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 269
>gi|242064546|ref|XP_002453562.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
gi|241933393|gb|EES06538.1| hypothetical protein SORBIDRAFT_04g008120 [Sorghum bicolor]
Length = 292
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 23/104 (22%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKGQ 537
K+ M G+ +GR +DL L YD L +D+L +E I G
Sbjct: 173 KINMDGIPIGRKIDLNALGSYDELSLSVDKLFRGLLAAQQDPLDASTKECSQEEVAISGL 232
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
L ++ +VY D EGD +LVGD PW F + VKR+ + + D+
Sbjct: 233 LDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 276
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA E PLD ++ L ++ G WRF++
Sbjct: 3 KEHMFEKVVTPSDVGKLNRLVIPKQHA-ERYFPLDFDKGNGGIILSFEERGGKAWRFRYS 61
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL+AGD +F RG
Sbjct: 62 YWNSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|302780269|ref|XP_002971909.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
gi|300160208|gb|EFJ26826.1| hypothetical protein SELMODRAFT_172524 [Selaginella moellendorffii]
Length = 345
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQ-----------LHTRTK--- 543
KV M GV +GR + L T Y+ L LEEMF I GQ L + TK
Sbjct: 225 VKVYMDGVPIGRKVSLRTHSSYERLSGALEEMFRRFISGQSGAGKAVAKDKLVSDTKKFN 284
Query: 544 ------WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ + Y D +GD+MLVGD PW F VKR+ I + ++P
Sbjct: 285 FIYGSDYVLTYEDKDGDLMLVGDVPWEMFVGAVKRLRIMKGSEAIGLAP 333
>gi|302766253|ref|XP_002966547.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
gi|300165967|gb|EFJ32574.1| hypothetical protein SELMODRAFT_168183 [Selaginella moellendorffii]
Length = 431
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHT----------------- 540
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 319 VKVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFL 378
Query: 541 -RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 379 QSSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|302801263|ref|XP_002982388.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
gi|300149980|gb|EFJ16633.1| hypothetical protein SELMODRAFT_179441 [Selaginella moellendorffii]
Length = 431
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 20/110 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD--IKGQLHT----------------- 540
KV M GV +GR +DL YD L LE+MF I GQ T
Sbjct: 319 VKVYMDGVPIGRKVDLKANNSYDKLSTVLEDMFLRFITGQNGTPEVSSIRDPGEKKLNFL 378
Query: 541 -RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
+ + + Y D +GD+MLVGD PW F VKR+ I + ++P K
Sbjct: 379 QSSDFVLTYEDKDGDLMLVGDVPWGMFTGTVKRLRIMKGSEAIGLAPRDK 428
>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQ-------LHTRTKWE 545
KV M GVA+GR +DL+ Y++L LE+MF + Q L +++
Sbjct: 127 KVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSEFV 186
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLP 591
+ Y D EGD MLVGD PW F VKR+ + + + ++ ++ P
Sbjct: 187 LTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQEP 232
>gi|351723637|ref|NP_001236774.1| uncharacterized protein LOC100305794 [Glycine max]
gi|255626619|gb|ACU13654.1| unknown [Glycine max]
Length = 217
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 37/127 (29%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------------------------- 532
K+ M GV +GR +D+ Y+ L ++E+F
Sbjct: 89 VKINMDGVPIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIGSSQCCSGQRDSCAG 148
Query: 533 ----------DIKGQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVK 582
KG L ++ +VY D+EGD MLVGD PWH F + VKR+ + S D+
Sbjct: 149 GIQNKEQEEKSNKGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLP 208
Query: 583 KMSPGSK 589
+ GSK
Sbjct: 209 AFTLGSK 215
>gi|359477690|ref|XP_002285483.2| PREDICTED: auxin-responsive protein IAA13-like isoform 2 [Vitis
vinifera]
Length = 321
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 20/106 (18%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF------------DI-KGQ-------LHT 540
KV M G+ +GR +DL Y L LE+MF D+ KGQ L
Sbjct: 202 KVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPPIRSDVEKGQSTNPSKLLDG 261
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+++ + Y D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 262 SSEFVLTYEDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 307
>gi|15228681|ref|NP_191769.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
gi|46396010|sp|Q9M1R4.1|IAA30_ARATH RecName: Full=Auxin-responsive protein IAA30; AltName:
Full=Indoleacetic acid-induced protein 30
gi|6899920|emb|CAB71870.1| auxin-induced protein homolog [Arabidopsis thaliana]
gi|49616377|gb|AAT67085.1| IAA30 [Arabidopsis thaliana]
gi|225898739|dbj|BAH30500.1| hypothetical protein [Arabidopsis thaliana]
gi|284794605|gb|ADB93675.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794607|gb|ADB93676.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794609|gb|ADB93677.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794611|gb|ADB93678.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794613|gb|ADB93679.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322669|gb|ADL70787.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322671|gb|ADL70788.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322673|gb|ADL70789.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322675|gb|ADL70790.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322677|gb|ADL70791.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322679|gb|ADL70792.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322681|gb|ADL70793.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322683|gb|ADL70794.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322685|gb|ADL70795.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322687|gb|ADL70796.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322689|gb|ADL70797.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322691|gb|ADL70798.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322693|gb|ADL70799.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|332646789|gb|AEE80310.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
Length = 172
Score = 62.4 bits (150), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 489 KQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRT 542
+ C + KV M+GV +GR +DL +L GY LI L+ MF+ + + +
Sbjct: 74 QNECNSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEK 133
Query: 543 KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 134 SHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKI 166
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 86 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYS 144
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 145 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 178
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 35 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 94
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 46 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 104
Query: 95 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 105 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 434 SAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSPKESQSKQSCL 493
SAP+ V+ T ++ + + A+++ + + V +S
Sbjct: 26 SAPAVAFGVTKATLPLFLLRDDDGDDSGEDGTAGARDWGTSNKRKRLVGWPPVKSAHRPR 85
Query: 494 TSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTKWEIVYTDDEG 553
+ + KV+M+GV +GR +DL+ Y L L MF +H + + Y D +G
Sbjct: 86 SHHNGHVKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFP-SSTVHHADPYAVTYEDGDG 144
Query: 554 DMMLVGDDPWHEFCNMVKRIFIC 576
D MLVGD PW EF KR+ I
Sbjct: 145 DWMLVGDVPWEEFSKSAKRLKIL 167
>gi|115435010|ref|NP_001042263.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|75263885|sp|Q9LG86.1|IAA2_ORYSJ RecName: Full=Auxin-responsive protein IAA2; AltName:
Full=Indoleacetic acid-induced protein 2
gi|9049459|dbj|BAA99424.1| putative auxin-induced protein IAA18 [Oryza sativa Japonica Group]
gi|113531794|dbj|BAF04177.1| Os01g0190300 [Oryza sativa Japonica Group]
gi|125569344|gb|EAZ10859.1| hypothetical protein OsJ_00698 [Oryza sativa Japonica Group]
gi|215713409|dbj|BAG94546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRT----------------- 542
K+ M GV +GR +DL GY L ++++F +G L ++
Sbjct: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLF--RGLLAAQSAAADGEADAAAAGEMVG 178
Query: 543 --KWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
++ +VY DDEGD MLVGD PW F KR+ + S D+
Sbjct: 179 GGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
>gi|255574879|ref|XP_002528346.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
gi|223532214|gb|EEF34018.1| Auxin-responsive protein IAA13, putative [Ricinus communis]
Length = 318
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF--------DIKGQLHTRTK--------- 543
KV M G+ +GR +DL Y+ L LE+MF G+ TK
Sbjct: 201 KVNMDGIPIGRKVDLNAHASYETLAQTLEDMFFRSTPSINSTGGEKQQSTKPSKLLDGSS 260
Query: 544 -WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ + Y D EGD MLVGD PW F VKR+ I + + ++P
Sbjct: 261 EFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRTSEANGLAP 304
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KV+T SD + ++HA + P LD + S L +D G WRF++ +
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSVISS 157
+ +++T GWS FV K+L AGD F R GE+G+ + + R + P+S+
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 252
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPRTSQFIISLNKYLEAVN 201
+HL S +V ++ + P S + + +++ +N
Sbjct: 253 SHLHLPTQLPFSQSVRWGRLYSLPQSPSMSMNMPQGHDHMQQLN 296
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ +++T GWS FV KRL AGDT F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 336 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 392
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 160
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 393 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 444
Query: 161 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 218
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 445 ----VIEAVWRAARREPFEVSYCLRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVED 500
Query: 219 S--PERRFSGTVVGVEDFS 235
P G V+ +E+++
Sbjct: 501 GKLPTIGPQGEVISIENYA 519
>gi|449465437|ref|XP_004150434.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
gi|449519671|ref|XP_004166858.1| PREDICTED: auxin-induced protein 22B-like [Cucumis sativus]
Length = 186
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 475 KQEQVQVSPKESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI 534
++ +QV K++++ + + KV M G R +DL+ GY L+ LE+MF
Sbjct: 69 RKNTLQV--KKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGYPELLKALEDMFKF 126
Query: 535 K-GQLHTRTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
GQ R ++ Y D +GD MLVGD PW F + KR+ I +V +S G
Sbjct: 127 TIGQYSEREGYKGSDFAPTYEDKDGDWMLVGDVPWQMFISSCKRMRIMKGSEVGGLSCG 185
>gi|297824785|ref|XP_002880275.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
gi|297326114|gb|EFH56534.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
Length = 167
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 492 CLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWE 545
C + KV M+GV +GR +DL +L GY LI L+ MF+ + +
Sbjct: 71 CHSVGSFYVKVNMEGVPIGRKIDLMSLNGYHDLIRTLDFMFNASILWAEEEDMCNEKSHV 130
Query: 546 IVYTDDEGDMMLVGDDPWHEFCNMVKRIFI 575
+ Y D EGD M+VGD PW F + V+R+ I
Sbjct: 131 LTYADKEGDWMMVGDVPWEMFLSTVRRLKI 160
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|302398583|gb|ADL36586.1| ARF domain class transcription factor [Malus x domestica]
Length = 295
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF----------DIKGQ------LHTRTKW 544
KV M G+ +GR ++L+ Y+ L +LE+MF +++G L ++
Sbjct: 180 KVNMDGIPIGRKVNLSAHSSYEALAQKLEDMFGPSTHGSGGQEMEGATRPSKLLDGSFEF 239
Query: 545 EIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
+ Y D +GD MLVGD PW F VKR+ I + + ++P
Sbjct: 240 ALTYEDKDGDWMLVGDVPWEMFLGTVKRLRIMRTSEANGLAP 281
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 35 PRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRF 94
P K H F KV+T SD + ++HA P LD + + L +D +G WRF
Sbjct: 49 PPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRF 107
Query: 95 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
++ + + +++T GWS FV K+L AGD F RG
Sbjct: 108 RYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|356503640|ref|XP_003520614.1| PREDICTED: auxin-responsive protein IAA13-like [Glycine max]
Length = 244
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 24/110 (21%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI-------KGQ---------------- 537
KV+M G+ +GR +DL Y+ L LE+MFD KG
Sbjct: 121 KVKMDGIPIGRKVDLGAHGSYETLAQTLEDMFDESATVLTHKGSNGEDHGTEVGADGHSK 180
Query: 538 -LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
LH + + Y D EGD MLVGD PW F N V+R+ I + + ++P
Sbjct: 181 LLHGSSDLVLTYEDKEGDWMLVGDVPWWMFLNSVRRLRIMRTPEANGLAP 230
>gi|413924061|gb|AFW63993.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 294
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 495 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 537
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 169 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 228
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 229 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 277
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 106 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 164
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 165 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|255548896|ref|XP_002515504.1| ATP binding protein, putative [Ricinus communis]
gi|223545448|gb|EEF46953.1| ATP binding protein, putative [Ricinus communis]
Length = 895
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 495 SNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI--KGQLHTRTKWEIVYTDDE 552
SN KV+M+GVA+ R +DL Y L + L MF KG + T + + Y D +
Sbjct: 144 SNYKYVKVKMEGVAIARKIDLRLFHSYQTLTNFLISMFGKCEKGDDDSTTNYTLTYQDKD 203
Query: 553 GDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSKLPMFSIE 596
GD +L GD PW F V+R+ + + + + S K P F +E
Sbjct: 204 GDWLLAGDVPWQTFMESVQRLELVRNGGLPRPSL-CKFPCFLME 246
>gi|449458912|ref|XP_004147190.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA13-like
[Cucumis sativus]
Length = 301
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 473 EKKQEQVQVSPKESQSKQSCLTSNRSR---TKVQMQGVAVGRALDLTTLVGYDHLIDELE 529
E+K++Q K++ ++C + KV + GV +GR +DL Y+ L LE
Sbjct: 166 EEKKDQ----SKDTLKNKTCDVDGKGHLGFVKVNVDGVVIGRKVDLNAHSCYETLALMLE 221
Query: 530 EMF------DIKGQ---LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
+MF K Q L +++ + Y D EGD MLVGD PW F N V+R+ I + +
Sbjct: 222 DMFFSGDKEQAKKQSKLLDGSSEFVLTYEDREGDWMLVGDVPWGMFVNSVRRLRIMRTSE 281
Query: 581 VKKMSPGSK 589
++P S+
Sbjct: 282 ANGLAPRSQ 290
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|225433277|ref|XP_002285481.1| PREDICTED: auxin-responsive protein IAA13-like isoform 1 [Vitis
vinifera]
Length = 314
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF------------DIKGQLHTRTKWEIVY 548
KV M G+ +GR +DL Y L LE+MF + L +++ + Y
Sbjct: 203 KVNMDGLPIGRKVDLDAHACYGTLAQTLEDMFFRHNTTMPRQSTNPSKLLDGSSEFVLTY 262
Query: 549 TDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
D EGD MLVGD PW F + VKR+ I + + ++P
Sbjct: 263 EDKEGDWMLVGDVPWGMFLSTVKRLRIMRTSEANGLAP 300
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 83 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 141
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 142 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|226509392|ref|NP_001141156.1| hypothetical protein [Zea mays]
gi|194702982|gb|ACF85575.1| unknown [Zea mays]
gi|413924062|gb|AFW63994.1| hypothetical protein ZEAMMB73_893762 [Zea mays]
Length = 293
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 495 SNRSRT----KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQ 537
S + RT KV M+G +GR +DL Y L LE MF
Sbjct: 168 SKKGRTVGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMKPSIGLCTSSSSKTLKL 227
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
L + +++++ Y D +GD MLVGD PW F VKR+ I + D K + P
Sbjct: 228 LDSSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDAKGLGP 276
>gi|359480055|ref|XP_002269922.2| PREDICTED: auxin-responsive protein IAA11-like [Vitis vinifera]
Length = 296
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-----IKGQLHTR--------TKWEIV 547
KV M G+ +GR +DL+ Y+ L LEEMF + TR + + +
Sbjct: 184 KVNMDGIPIGRKVDLSAHSCYETLAKTLEEMFQGPTTTVNAIESTRPSKLLDGSSDFVLT 243
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
Y D EGD MLVGD PW F +R+ I + D ++P
Sbjct: 244 YEDKEGDWMLVGDVPWGMFLGSARRLRIMRTSDANGLAP 282
>gi|326517390|dbj|BAK00062.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFD-------------------IKGQLHT 540
K+ M G+ +GR +DL Y L ++ +F+ I G L
Sbjct: 110 VKINMDGIPIGRKVDLKAHDSYGKLAAAVDHLFEGLLAAQRDESSCAGEKPAAITGLLDG 169
Query: 541 RTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
++ +VY DDEGD MLVGD PW F KR+ + S D+ S
Sbjct: 170 SGEYTLVYEDDEGDQMLVGDVPWDMFIATAKRLRVLRSSDLNASS 214
>gi|429326544|gb|AFZ78612.1| hypothetical protein [Populus tomentosa]
Length = 204
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTRTKW---EIV--YTDDEG 553
KV M G R +DL GY L++ +EEMF K G+ R + E V Y D +G
Sbjct: 110 VKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDG 169
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D MLVGD PW F N KR+ I + + +
Sbjct: 170 DWMLVGDVPWEMFINSCKRLRIMKESEARGLG 201
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|15226476|ref|NP_182222.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
gi|11131099|sp|O24410.2|IAA20_ARATH RecName: Full=Auxin-responsive protein IAA20; AltName:
Full=Indoleacetic acid-induced protein 20
gi|13194770|gb|AAK15547.1|AF348576_1 auxin-induced protein IAA20 [Arabidopsis thaliana]
gi|3522954|gb|AAC34236.1| auxin-induced protein (IAA20) [Arabidopsis thaliana]
gi|26449566|dbj|BAC41909.1| putative auxin-induced protein [Arabidopsis thaliana]
gi|330255689|gb|AEC10783.1| auxin-responsive protein IAA20 [Arabidopsis thaliana]
Length = 175
Score = 61.6 bits (148), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|449466107|ref|XP_004150768.1| PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus]
gi|449490048|ref|XP_004158493.1| PREDICTED: auxin-responsive protein IAA26-like [Cucumis sativus]
Length = 326
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL--------------------EEMFDIKG 536
K+ M GV +GR +DL Y+ L +DEL EE I G
Sbjct: 202 VKINMDGVPIGRKIDLNAYDSYEKLSFGVDELFRGLLAAQRDSSGGGVLNKQEEEKPITG 261
Query: 537 QLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPG 587
L ++ +VY D+EGD +LVGD PW F + KR+ + S ++ +S G
Sbjct: 262 LLDGSGEYTLVYEDNEGDRVLVGDVPWQMFVSTAKRLRVLKSSELPSLSLG 312
>gi|297707657|gb|ADB93651.2| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 173
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 33 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYS 91
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 92 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 125
>gi|363806854|ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycine max]
gi|255642213|gb|ACU21371.1| unknown [Glycine max]
Length = 187
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 424 GIELINHATSSAPSEKVPVSSLTTEGHIISTISAAADSDGKSDIAKEFKEKKQEQVQVSP 483
G+E+ P ++P + + + S I+ D + S+ ++ + K Q V P
Sbjct: 7 GLEITTELRLGLPGGELPDKNEKMKKRVFSEINQG-DENSSSEEDRKIQTKNQ-VVGWPP 64
Query: 484 KESQSKQSCLTSNRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTRTK 543
S K++ + + KV M G R +DL GY L LE+ F G
Sbjct: 65 VCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMRKGYSELALALEKFFGCYGIGSALKD 124
Query: 544 WEIV-----YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSPGSK 589
E V Y D +GD MLVGD PW F KR+ I D K P K
Sbjct: 125 EENVVQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDPQPK 175
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA P LD + L +D G WRF++
Sbjct: 34 KEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYS 92
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 93 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 126
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 38 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHI 97
K H F KV+T SD + ++HA + P LD + L +D G WRF++
Sbjct: 96 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYS 154
Query: 98 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 131
+ + +++T GWS FV KRL AGDT F RG
Sbjct: 155 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|304322486|gb|ADL70730.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 154
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|304322484|gb|ADL70729.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 174
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|304322480|gb|ADL70727.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 172
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|320098853|gb|ADW10155.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
gi|320098855|gb|ADW10156.1| putative auxin-responsive protein IAA1 [Schiedea membranacea]
Length = 102
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 489 KQSCLTSNRS-RTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQLHTR----TK 543
++SC S + KV M G R +DL Y+ L++ LE+MF+ K T T+
Sbjct: 5 RKSCFQSKPTILVKVSMDGAPYLRKIDLNLYKCYNELLNALEDMFNFKIGKETGNKDGTE 64
Query: 544 WEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
+E Y D +GD MLVGD PW F KR+ I ++
Sbjct: 65 YETTYEDKDGDWMLVGDVPWEMFTTSCKRLRIIKGSEL 102
>gi|304322470|gb|ADL70722.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322476|gb|ADL70725.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322488|gb|ADL70731.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322494|gb|ADL70734.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 88 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 147
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 148 WMMVGDVPWEMFLSTVRRLKI 168
>gi|2618729|gb|AAB84357.1| IAA20, partial [Arabidopsis thaliana]
Length = 166
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 79 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 138
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 139 WMMVGDVPWEMFLSTVRRLKI 159
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KV+T SD + ++HA + P LD + + L +D G WRF++ +
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSV 154
+ +++T GWS FV K+L AGD F R GE+G+ + + R + PSS+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|20269063|emb|CAC84712.1| aux/IAA protein [Populus tremula x Populus tremuloides]
Length = 204
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 489 KQSCLTSNRSR-------TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHT 540
+++CL + + KV M G R +DL GY L+ LEEMF K G+
Sbjct: 92 RKNCLQAKKQEAEAAGLYVKVSMDGAPYLRKIDLKVYKGYPELLKALEEMFKSKVGEYSE 151
Query: 541 RTKWEI-----VYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
R + Y D +GD MLVGD PW F N KR+ I + + +
Sbjct: 152 REGYNGSEHVPTYEDKDGDWMLVGDVPWDMFINSCKRLRIMKESEARGLG 201
>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
Length = 273
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 33 DSPRP--------KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQE--- 81
DS RP K H F KV+T SD + ++HA P LD + + +
Sbjct: 13 DSERPRGGVAWLEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASA 72
Query: 82 --------LVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEN 133
L +D G WRF++ + + +++T GWS FV KRL AGDT +F RG
Sbjct: 73 GGGKAGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAG 132
Query: 134 G 134
Sbjct: 133 A 133
>gi|304322492|gb|ADL70733.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 168
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDI------KGQLHTRTKWEIVYTDDEGD 554
KV M+GV +GR +DL +L GY LI L+ MF+ + + + Y D EGD
Sbjct: 85 KVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 144
Query: 555 MMLVGDDPWHEFCNMVKRIFI 575
M+VGD PW F + V+R+ I
Sbjct: 145 WMMVGDVPWEMFLSTVRRLKI 165
>gi|224130638|ref|XP_002328339.1| predicted protein [Populus trichocarpa]
gi|222838054|gb|EEE76419.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIK-GQLHTRTKW---EIV--YTDDEG 553
KV M G R +DL GY L++ +EEMF K G+ R + E V Y D +G
Sbjct: 107 VKVSMDGAPYLRKIDLKVYKGYPELLEVVEEMFKFKVGEYSEREGYNGSEYVPTYEDKDG 166
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSSQDVKKMS 585
D MLVGD PW F N KR+ I + + +
Sbjct: 167 DWMLVGDVPWEMFINSCKRLRIMKESEARGLG 198
>gi|115448385|ref|NP_001047972.1| Os02g0723400 [Oryza sativa Japonica Group]
gi|88911341|sp|Q6Z5M0.2|IAA8_ORYSJ RecName: Full=Auxin-responsive protein IAA8; AltName:
Full=Indoleacetic acid-induced protein 8
gi|45736000|dbj|BAD13028.1| putative aux/IAA protein [Oryza sativa Japonica Group]
gi|113537503|dbj|BAF09886.1| Os02g0723400 [Oryza sativa Japonica Group]
gi|215694817|dbj|BAG90008.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191484|gb|EEC73911.1| hypothetical protein OsI_08748 [Oryza sativa Indica Group]
gi|222623581|gb|EEE57713.1| hypothetical protein OsJ_08196 [Oryza sativa Japonica Group]
Length = 205
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 501 KVQMQGVAVGRALDLTTLVGYDHLIDELEEMF-------------DIKGQLHTRTKWEIV 547
KV M+GV +GR LDL L GY L+ L MF + G + +
Sbjct: 107 KVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKVHHVLT 166
Query: 548 YTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQD 580
Y D EGD M+ GD PW F VKR+ I + D
Sbjct: 167 YEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>gi|294462142|gb|ADE76623.1| unknown [Picea sitchensis]
Length = 123
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 504 MQGVAVGRALDLTTLVGYDHLIDELEEMF----DIKGQ---------------------- 537
M GV +GR +DL Y+ L LEEMF + GQ
Sbjct: 1 MDGVPIGRKVDLNAHDSYEALAQALEEMFQRPNNANGQSGPQTPMERGHVGANDPKQSRL 60
Query: 538 LHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDVKKMSP 586
L + + + + Y D EGD MLVGD PW F N VKR+ + + D ++P
Sbjct: 61 LDSSSDFVLTYEDKEGDWMLVGDVPWRMFVNTVKRLRVMKTSDANGLAP 109
>gi|225429365|ref|XP_002277798.1| PREDICTED: auxin-responsive protein IAA6-like [Vitis vinifera]
Length = 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 24/106 (22%)
Query: 500 TKVQMQGVAVGRALDLTTLVGYDHL---IDEL---------------------EEMFDIK 535
K+ M GV +GR +DL Y+ L +D+L EE +
Sbjct: 217 VKINMDGVPIGRKVDLKACDSYEKLSYAVDDLFRGLLSAQNESSAGTGNENKMEEAKTMA 276
Query: 536 GQLHTRTKWEIVYTDDEGDMMLVGDDPWHEFCNMVKRIFICSSQDV 581
G ++ +VY D+EGD MLVGD PWH F + V+R+ + S ++
Sbjct: 277 GLFDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVRRLRVLKSSEL 322
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 41 SFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFRG 100
SF K LT +D + + A LP + +N P L KDL G EW F + ++
Sbjct: 353 SFVKPLTYTDVTKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKA 409
Query: 101 QPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELHVGVRCLARQQSSMPSSVISSQSM 160
R + GW F + LV GD VF+R NGE+ + VR + P SV
Sbjct: 410 HTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVR--RTRNRPAPFSVEE---- 461
Query: 161 HLGVLATASHAVATQTMFVVYYKPR--TSQFIISLNKYLEAVNNKFAVGMRYKMRFEGED 218
+ A A + F V Y R +F++ + + + +FA GM + ED
Sbjct: 462 ----VIEAVWRAARREPFEVSYCSRQDGDEFVVPRDIVDDGLRARFAPGMAVNFVWAVED 517
Query: 219 S--PERRFSGTVVGVEDFS 235
P G V+ +E+++
Sbjct: 518 GKLPTIGPQGEVISIENYA 536
>gi|365818565|gb|AEX00371.1| IAA36 [Solanum lycopersicum]
Length = 242
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 496 NRSRTKVQMQGVAVGRALDLTTLVGYDHLIDELEEMFDIKGQL--HTRTKWEIVYTDDEG 553
N KV+M+GVA+GR +DL Y L + L +MF+ + ++ ++Y D EG
Sbjct: 141 NSMYVKVKMEGVAIGRKIDLMLYNSYQILTNTLLQMFNKSHESCDENDGRFTLLYQDKEG 200
Query: 554 DMMLVGDDPWHEFCNMVKRIFICSS 578
D ML GD PW F V+RI I S+
Sbjct: 201 DWMLAGDVPWETFMETVQRIQILSN 225
>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
Query: 40 HSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMNQSTPTQELVAKDLHGYEWRFKHIFR 99
H F KV+T SD + ++HA + P LD + S L +D G WRF++ +
Sbjct: 93 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 151
Query: 100 GQPRRHLLTTGWSTFVTSKRLVAGDTFVFLR--GENGELHVGVRCLARQQSSMPSSVISS 157
+ +++T GWS FV K+L AGD F R GE+G+ + + R + P+S+
Sbjct: 152 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL--- 208
Query: 158 QSMHLGVLATASHAVATQTMFVVYYKPRT 186
+HL S +V ++ + P T
Sbjct: 209 SHLHLPTQLPFSQSVRWGRLYSLPQSPNT 237
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.128 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,736,840,994
Number of Sequences: 23463169
Number of extensions: 414624680
Number of successful extensions: 1027876
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 933
Number of HSP's that attempted gapping in prelim test: 1021677
Number of HSP's gapped (non-prelim): 3339
length of query: 609
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 460
effective length of database: 8,863,183,186
effective search space: 4077064265560
effective search space used: 4077064265560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 80 (35.4 bits)