Query 007283
Match_columns 609
No_of_seqs 255 out of 2822
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 21:53:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 4.5E-79 1.5E-83 655.7 81.3 594 3-607 5-610 (611)
2 1pgu_A Actin interacting prote 100.0 2.3E-64 7.8E-69 544.2 70.7 575 3-609 5-615 (615)
3 2ymu_A WD-40 repeat protein; u 100.0 4.1E-62 1.4E-66 522.5 78.0 556 14-605 14-577 (577)
4 2ymu_A WD-40 repeat protein; u 100.0 1.1E-57 3.6E-62 488.3 73.2 522 50-607 9-538 (577)
5 1nr0_A Actin interacting prote 100.0 6E-56 2.1E-60 476.1 67.5 525 14-564 57-610 (611)
6 3sfz_A APAF-1, apoptotic pepti 100.0 3.9E-55 1.3E-59 509.7 58.8 536 14-607 613-1248(1249)
7 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-51 4.6E-56 458.0 60.4 546 10-608 11-732 (902)
8 3sfz_A APAF-1, apoptotic pepti 100.0 7.9E-52 2.7E-56 481.8 60.8 539 51-608 609-1207(1249)
9 2oaj_A Protein SNI1; WD40 repe 100.0 5.8E-52 2E-56 460.9 54.7 493 53-606 13-659 (902)
10 1pgu_A Actin interacting prote 100.0 5.1E-50 1.7E-54 432.1 59.2 510 14-565 61-614 (615)
11 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-44 1.2E-48 399.5 49.9 474 14-605 11-502 (814)
12 3mkq_A Coatomer beta'-subunit; 100.0 4.4E-43 1.5E-47 390.7 44.8 435 49-607 5-459 (814)
13 1vyh_C Platelet-activating fac 100.0 1.2E-42 4.1E-47 354.1 37.5 309 50-563 101-409 (410)
14 3ow8_A WD repeat-containing pr 100.0 1.3E-41 4.6E-46 334.2 40.9 291 51-564 26-320 (321)
15 1vyh_C Platelet-activating fac 100.0 5.3E-41 1.8E-45 342.0 41.7 289 138-607 101-410 (410)
16 1got_B GT-beta; complex (GTP-b 100.0 1.9E-40 6.6E-45 329.2 43.6 290 49-519 47-340 (340)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-40 4.7E-45 330.9 41.0 304 179-608 6-335 (345)
18 1got_B GT-beta; complex (GTP-b 100.0 6.5E-40 2.2E-44 325.4 45.3 293 179-605 46-340 (340)
19 3ow8_A WD repeat-containing pr 100.0 1.5E-40 5.3E-45 326.6 39.9 289 139-607 26-320 (321)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-40 1E-44 328.5 41.7 316 50-566 8-336 (345)
21 4g56_B MGC81050 protein; prote 100.0 8.9E-41 3.1E-45 333.5 36.7 306 36-566 25-344 (357)
22 4gqb_B Methylosome protein 50; 100.0 1.4E-40 4.9E-45 329.3 37.1 308 40-566 17-332 (344)
23 2pbi_B Guanine nucleotide-bind 100.0 1.2E-39 4.1E-44 325.1 42.7 291 49-519 56-354 (354)
24 2ynn_A Coatomer subunit beta'; 100.0 1.4E-39 4.7E-44 317.7 40.2 292 138-564 6-301 (304)
25 3iz6_a 40S ribosomal protein R 100.0 2E-40 6.9E-45 334.4 35.1 314 172-608 50-375 (380)
26 3frx_A Guanine nucleotide-bind 100.0 3.3E-39 1.1E-43 317.2 39.6 295 138-608 10-317 (319)
27 2pbi_B Guanine nucleotide-bind 100.0 5.3E-39 1.8E-43 320.4 41.6 295 137-562 56-354 (354)
28 1r5m_A SIR4-interacting protei 100.0 5.6E-39 1.9E-43 329.1 41.2 343 38-564 26-424 (425)
29 2hes_X YDR267CP; beta-propelle 100.0 3.5E-39 1.2E-43 318.7 38.1 307 48-565 5-328 (330)
30 2hes_X YDR267CP; beta-propelle 100.0 1.6E-38 5.4E-43 314.0 42.1 297 137-608 6-328 (330)
31 2ynn_A Coatomer subunit beta'; 100.0 2E-38 6.7E-43 309.5 41.3 208 49-263 5-216 (304)
32 3iz6_a 40S ribosomal protein R 100.0 3.1E-39 1.1E-43 325.6 36.5 303 137-565 58-375 (380)
33 1gxr_A ESG1, transducin-like e 100.0 3E-38 1E-42 313.1 40.3 321 56-563 8-335 (337)
34 3vl1_A 26S proteasome regulato 100.0 2.7E-39 9.4E-44 331.3 33.8 349 59-608 58-419 (420)
35 2xzm_R RACK1; ribosome, transl 100.0 3.6E-38 1.2E-42 313.4 39.8 300 50-522 14-340 (343)
36 4gqb_B Methylosome protein 50; 100.0 1.3E-38 4.3E-43 315.3 35.9 289 11-356 25-331 (344)
37 1r5m_A SIR4-interacting protei 100.0 4.1E-38 1.4E-42 322.7 41.0 356 128-607 28-424 (425)
38 2xzm_R RACK1; ribosome, transl 100.0 9.5E-38 3.2E-42 310.3 41.9 301 138-607 14-339 (343)
39 3frx_A Guanine nucleotide-bind 100.0 8.2E-38 2.8E-42 307.3 40.9 205 51-263 11-226 (319)
40 2pm9_A Protein WEB1, protein t 100.0 1.2E-39 4E-44 333.5 27.6 340 58-565 13-414 (416)
41 1erj_A Transcriptional repress 100.0 2.6E-37 8.9E-42 313.1 41.6 285 143-607 62-388 (393)
42 2pm9_A Protein WEB1, protein t 100.0 7E-39 2.4E-43 327.7 28.8 345 146-609 13-415 (416)
43 1gxr_A ESG1, transducin-like e 100.0 5.6E-37 1.9E-41 303.9 40.1 326 144-607 8-336 (337)
44 1erj_A Transcriptional repress 100.0 2.8E-36 9.7E-41 305.5 45.0 303 98-565 62-389 (393)
45 4g56_B MGC81050 protein; prote 100.0 3E-37 1E-41 308.0 36.1 289 11-356 37-343 (357)
46 4ery_A WD repeat-containing pr 100.0 3.6E-36 1.2E-40 295.0 42.4 292 50-354 16-310 (312)
47 4ery_A WD repeat-containing pr 100.0 4.8E-36 1.7E-40 294.0 41.7 291 138-564 16-311 (312)
48 2j04_B YDR362CP, TAU91; beta p 100.0 3.4E-37 1.2E-41 320.3 30.2 350 99-608 132-517 (524)
49 4aow_A Guanine nucleotide-bind 100.0 3.5E-35 1.2E-39 291.6 41.8 206 51-263 32-245 (340)
50 3gre_A Serine/threonine-protei 100.0 3.2E-37 1.1E-41 317.7 28.1 199 23-263 34-244 (437)
51 3vl1_A 26S proteasome regulato 100.0 1.3E-35 4.5E-40 303.9 39.4 345 21-565 61-419 (420)
52 4aow_A Guanine nucleotide-bind 100.0 2.5E-35 8.7E-40 292.5 40.3 294 138-566 31-338 (340)
53 4h5i_A Guanine nucleotide-exch 100.0 2.6E-36 8.7E-41 302.1 32.4 297 57-565 14-343 (365)
54 3v7d_B Cell division control p 100.0 1.2E-34 4.1E-39 300.9 45.1 347 137-607 113-462 (464)
55 2j04_A TAU60, YPL007P, hypothe 100.0 1E-37 3.5E-42 315.1 20.5 318 57-553 15-349 (588)
56 3zwl_B Eukaryotic translation 100.0 6.7E-34 2.3E-38 285.5 45.0 300 138-607 25-345 (369)
57 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.9E-34 1.7E-38 294.5 44.8 321 49-565 110-442 (445)
58 3dm0_A Maltose-binding peripla 100.0 1.7E-34 5.8E-39 314.8 42.2 292 139-564 376-692 (694)
59 1k8k_C P40, ARP2/3 complex 41 100.0 1.1E-34 3.6E-39 291.9 36.6 311 141-607 4-360 (372)
60 3dm0_A Maltose-binding peripla 100.0 2.6E-34 8.7E-39 313.4 41.8 296 52-521 377-692 (694)
61 2j04_B YDR362CP, TAU91; beta p 100.0 2.9E-36 9.9E-41 313.3 24.6 184 72-263 176-385 (524)
62 3ei3_B DNA damage-binding prot 100.0 7.1E-35 2.4E-39 294.6 34.2 208 46-264 62-282 (383)
63 3i2n_A WD repeat-containing pr 100.0 3.7E-34 1.3E-38 286.1 38.7 297 140-565 13-353 (357)
64 3dwl_C Actin-related protein 2 100.0 1.6E-35 5.5E-40 298.6 28.7 310 141-606 7-377 (377)
65 3v7d_B Cell division control p 100.0 1.6E-33 5.6E-38 292.3 43.8 322 51-563 115-461 (464)
66 4h5i_A Guanine nucleotide-exch 100.0 4.7E-35 1.6E-39 292.9 31.0 295 188-608 14-343 (365)
67 3ei3_B DNA damage-binding prot 100.0 2.2E-34 7.6E-39 290.9 36.2 296 136-565 64-382 (383)
68 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.4E-33 1.5E-37 287.3 46.1 321 137-608 110-442 (445)
69 4e54_B DNA damage-binding prot 100.0 5E-35 1.7E-39 300.7 30.6 297 139-566 113-431 (435)
70 2pm7_B Protein transport prote 100.0 1E-33 3.4E-38 275.1 37.3 253 230-607 6-284 (297)
71 3k26_A Polycomb protein EED; W 100.0 3.2E-34 1.1E-38 287.6 34.7 338 52-564 13-365 (366)
72 3zwl_B Eukaryotic translation 100.0 3.1E-33 1.1E-37 280.6 41.7 204 51-263 26-248 (369)
73 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-33 1.1E-37 273.8 38.8 287 178-608 8-296 (313)
74 3i2n_A WD repeat-containing pr 100.0 1.7E-33 5.7E-38 281.4 37.2 299 182-608 12-353 (357)
75 3odt_A Protein DOA1; ubiquitin 100.0 5.8E-33 2E-37 272.0 39.2 288 137-566 10-297 (313)
76 1sq9_A Antiviral protein SKI8; 100.0 1.9E-33 6.4E-38 285.6 36.5 305 139-565 10-395 (397)
77 4aez_A CDC20, WD repeat-contai 100.0 2.6E-33 8.9E-38 284.8 37.1 292 54-526 88-384 (401)
78 1sq9_A Antiviral protein SKI8; 100.0 4.8E-33 1.7E-37 282.5 38.5 310 181-608 9-395 (397)
79 3dwl_C Actin-related protein 2 100.0 1.6E-34 5.6E-39 291.3 25.5 322 16-354 11-377 (377)
80 1k8k_C P40, ARP2/3 complex 41 100.0 3.5E-33 1.2E-37 280.8 34.5 316 15-356 7-361 (372)
81 3k26_A Polycomb protein EED; W 100.0 1.6E-33 5.5E-38 282.5 31.5 296 184-607 14-365 (366)
82 4e54_B DNA damage-binding prot 100.0 2.7E-33 9.3E-38 287.7 31.8 296 53-357 115-431 (435)
83 2pm7_B Protein transport prote 100.0 1E-32 3.6E-37 268.0 33.2 248 13-263 6-284 (297)
84 4a11_B DNA excision repair pro 100.0 1.3E-32 4.4E-37 280.3 33.8 357 129-607 27-404 (408)
85 3bg1_A Protein SEC13 homolog; 100.0 2.3E-33 8E-38 275.1 27.2 253 230-607 10-292 (316)
86 2j04_A TAU60, YPL007P, hypothe 100.0 7.6E-34 2.6E-38 287.0 23.7 324 98-597 13-350 (588)
87 4gga_A P55CDC, cell division c 100.0 1.4E-31 4.7E-36 273.8 40.4 284 60-523 108-396 (420)
88 4gga_A P55CDC, cell division c 100.0 1.3E-31 4.3E-36 274.0 40.1 281 189-607 106-394 (420)
89 1k32_A Tricorn protease; prote 100.0 2.2E-30 7.6E-35 294.6 53.8 514 17-608 15-637 (1045)
90 4a11_B DNA excision repair pro 100.0 6E-32 2E-36 275.3 36.1 312 38-358 24-367 (408)
91 1yfq_A Cell cycle arrest prote 100.0 2.7E-32 9.4E-37 270.9 32.6 288 184-600 7-315 (342)
92 4aez_A CDC20, WD repeat-contai 100.0 1.2E-31 4.2E-36 272.4 37.2 285 185-608 88-380 (401)
93 4ggc_A P55CDC, cell division c 100.0 3.1E-31 1.1E-35 260.4 38.6 284 190-565 27-315 (318)
94 3bg1_A Protein SEC13 homolog; 100.0 1.1E-32 3.8E-37 270.2 26.8 256 51-355 7-292 (316)
95 4ggc_A P55CDC, cell division c 100.0 9.2E-31 3.1E-35 257.0 39.7 284 60-522 28-315 (318)
96 1yfq_A Cell cycle arrest prote 100.0 5.1E-31 1.8E-35 261.7 36.2 289 52-563 6-322 (342)
97 3mmy_A MRNA export factor; mRN 100.0 6.5E-31 2.2E-35 263.6 33.1 293 136-564 30-345 (368)
98 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-30 7.6E-35 266.1 36.7 278 184-607 129-413 (435)
99 3dw8_B Serine/threonine-protei 100.0 9.4E-31 3.2E-35 270.1 34.1 199 56-263 27-314 (447)
100 3jrp_A Fusion protein of prote 100.0 9.2E-31 3.1E-35 263.7 32.5 266 138-564 4-286 (379)
101 3gre_A Serine/threonine-protei 100.0 5.6E-31 1.9E-35 271.0 31.3 322 13-352 60-436 (437)
102 3mmy_A MRNA export factor; mRN 100.0 1.1E-30 3.7E-35 261.9 31.9 295 174-606 25-344 (368)
103 3dw8_B Serine/threonine-protei 100.0 1.2E-30 4.2E-35 269.2 32.9 309 143-562 26-443 (447)
104 3jrp_A Fusion protein of prote 100.0 1.8E-30 6.2E-35 261.5 32.5 255 180-607 3-286 (379)
105 1p22_A F-BOX/WD-repeat protein 100.0 8.7E-30 3E-34 261.7 36.0 278 142-566 130-415 (435)
106 3f3f_A Nucleoporin SEH1; struc 100.0 3.6E-30 1.2E-34 255.9 31.9 295 50-357 4-338 (351)
107 1k32_A Tricorn protease; prote 100.0 6.4E-28 2.2E-32 274.4 53.5 434 56-563 13-500 (1045)
108 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-29 6.4E-34 251.4 32.9 285 178-607 9-335 (355)
109 3f3f_A Nucleoporin SEH1; struc 100.0 1.8E-29 6.1E-34 250.8 31.8 250 13-265 8-338 (351)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-29 4.3E-34 257.8 29.6 283 150-566 39-343 (402)
111 3vu4_A KMHSV2; beta-propeller 100.0 9.1E-29 3.1E-33 246.5 34.1 305 41-565 3-336 (355)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 8.9E-29 3E-33 251.5 30.5 282 20-312 38-342 (402)
113 2w18_A PALB2, fancn, partner a 100.0 4.9E-28 1.7E-32 229.8 31.9 285 72-563 57-355 (356)
114 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-27 5.7E-32 245.8 38.4 312 100-521 4-390 (450)
115 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-27 4.8E-32 246.4 35.9 236 21-262 9-337 (450)
116 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-28 3.7E-33 245.1 26.2 275 196-604 44-329 (343)
117 3jro_A Fusion protein of prote 100.0 1.3E-28 4.5E-33 269.8 28.8 253 182-607 3-284 (753)
118 3bws_A Protein LP49; two-domai 100.0 2.5E-26 8.5E-31 235.9 43.2 354 58-564 28-431 (433)
119 4gq1_A NUP37; propeller, trans 100.0 1.6E-28 5.5E-33 248.3 26.1 284 144-520 88-387 (393)
120 3bws_A Protein LP49; two-domai 100.0 2.1E-26 7.3E-31 236.4 41.1 350 21-521 32-431 (433)
121 1l0q_A Surface layer protein; 100.0 4.4E-26 1.5E-30 230.7 40.8 333 69-552 2-365 (391)
122 2xyi_A Probable histone-bindin 100.0 1.2E-27 4.2E-32 245.1 29.5 248 13-263 125-409 (430)
123 2xyi_A Probable histone-bindin 100.0 1.5E-27 5E-32 244.5 29.6 264 52-356 123-410 (430)
124 1l0q_A Surface layer protein; 100.0 9.3E-26 3.2E-30 228.3 40.5 267 159-566 3-276 (391)
125 4gq1_A NUP37; propeller, trans 100.0 1.6E-27 5.6E-32 240.9 26.0 270 186-563 87-387 (393)
126 3jro_A Fusion protein of prote 100.0 1.9E-27 6.6E-32 260.5 28.2 250 12-264 5-285 (753)
127 3lrv_A PRE-mRNA-splicing facto 100.0 4.9E-26 1.7E-30 225.8 29.6 233 22-264 42-292 (343)
128 2w18_A PALB2, fancn, partner a 100.0 3E-26 1E-30 217.6 26.3 225 30-262 56-355 (356)
129 1nir_A Nitrite reductase; hemo 99.9 3E-24 1E-28 224.9 37.2 326 64-566 144-515 (543)
130 1nir_A Nitrite reductase; hemo 99.9 2.2E-23 7.4E-28 218.4 38.1 329 152-608 144-514 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.5E-24 1.5E-28 216.9 30.9 304 58-547 63-410 (415)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-23 3.7E-28 231.7 36.1 328 57-564 36-458 (741)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-23 5E-28 213.2 30.5 299 147-589 64-408 (415)
134 1xfd_A DIP, dipeptidyl aminope 99.9 3.9E-23 1.4E-27 226.6 27.3 358 59-594 18-426 (723)
135 2z3z_A Dipeptidyl aminopeptida 99.9 1.2E-21 4.2E-26 214.0 38.8 328 28-566 35-436 (706)
136 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-22 5.3E-27 222.5 30.8 234 18-263 38-366 (741)
137 1xfd_A DIP, dipeptidyl aminope 99.9 7.9E-22 2.7E-26 216.2 28.8 231 17-263 17-288 (723)
138 1ri6_A Putative isomerase YBHE 99.9 3.7E-20 1.2E-24 183.3 35.5 189 71-263 7-208 (343)
139 3u4y_A Uncharacterized protein 99.9 6E-20 2.1E-24 180.9 31.5 236 22-263 3-251 (331)
140 3u4y_A Uncharacterized protein 99.9 2.1E-19 7.2E-24 177.0 35.4 283 152-565 4-304 (331)
141 2ojh_A Uncharacterized protein 99.9 7.7E-21 2.6E-25 183.7 24.2 220 36-263 21-257 (297)
142 1ri6_A Putative isomerase YBHE 99.9 2.5E-19 8.5E-24 177.3 33.6 280 158-565 5-308 (343)
143 2ojh_A Uncharacterized protein 99.9 9.3E-21 3.2E-25 183.1 20.9 236 16-255 41-293 (297)
144 2z3z_A Dipeptidyl aminopeptida 99.9 3E-19 1E-23 195.2 32.6 363 150-608 30-435 (706)
145 3o4h_A Acylamino-acid-releasin 99.8 3.6E-19 1.2E-23 189.7 28.4 138 451-600 153-304 (582)
146 3vgz_A Uncharacterized protein 99.8 7.1E-18 2.4E-22 167.6 35.9 203 57-263 40-261 (353)
147 1z68_A Fibroblast activation p 99.8 1.7E-19 5.9E-24 197.4 25.6 324 19-357 18-444 (719)
148 3scy_A Hypothetical bacterial 99.8 3.5E-17 1.2E-21 163.2 39.1 317 165-588 24-361 (361)
149 3hfq_A Uncharacterized protein 99.8 1.9E-17 6.5E-22 164.2 35.2 283 167-565 15-317 (347)
150 3vgz_A Uncharacterized protein 99.8 9E-18 3.1E-22 166.8 31.0 248 16-275 40-311 (353)
151 3hfq_A Uncharacterized protein 99.8 3.6E-18 1.2E-22 169.4 27.3 244 16-263 39-316 (347)
152 1pby_B Quinohemoprotein amine 99.8 4.2E-18 1.4E-22 167.9 27.6 269 160-567 3-312 (337)
153 3o4h_A Acylamino-acid-releasin 99.8 1.8E-18 6.1E-23 184.4 26.7 273 57-354 21-313 (582)
154 2oit_A Nucleoporin 214KDA; NH2 99.8 4.9E-18 1.7E-22 173.0 27.4 211 18-264 38-278 (434)
155 1z68_A Fibroblast activation p 99.8 8E-18 2.7E-22 184.2 29.1 195 62-261 20-284 (719)
156 1pby_B Quinohemoprotein amine 99.8 5.4E-18 1.8E-22 167.2 22.8 238 18-274 35-317 (337)
157 1jmx_B Amine dehydrogenase; ox 99.8 8E-17 2.7E-21 159.6 30.1 152 62-263 4-174 (349)
158 3scy_A Hypothetical bacterial 99.8 4.7E-16 1.6E-20 155.0 34.0 287 36-333 26-360 (361)
159 1jmx_B Amine dehydrogenase; ox 99.8 5.9E-17 2E-21 160.5 25.0 239 22-275 5-333 (349)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-17 5.7E-22 165.7 21.0 243 18-264 41-341 (365)
161 2oit_A Nucleoporin 214KDA; NH2 99.8 4.6E-17 1.6E-21 165.7 23.3 159 446-607 91-277 (434)
162 4a5s_A Dipeptidyl peptidase 4 99.7 1.2E-16 4E-21 175.0 25.4 239 16-263 16-352 (740)
163 3azo_A Aminopeptidase; POP fam 99.7 1.7E-16 5.9E-21 171.9 26.4 203 50-261 16-269 (662)
164 3pe7_A Oligogalacturonate lyas 99.7 3.2E-16 1.1E-20 157.8 25.6 163 85-253 16-208 (388)
165 3fvz_A Peptidyl-glycine alpha- 99.7 2E-15 6.9E-20 148.1 29.2 245 16-263 23-321 (329)
166 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.6E-15 5.4E-20 151.3 27.9 250 56-312 38-341 (365)
167 3pe7_A Oligogalacturonate lyas 99.7 5.7E-15 1.9E-19 148.7 30.9 299 41-354 14-380 (388)
168 4a5s_A Dipeptidyl peptidase 4 99.7 7.1E-15 2.4E-19 160.9 32.7 203 57-265 16-295 (740)
169 3azo_A Aminopeptidase; POP fam 99.7 8.9E-15 3E-19 158.4 26.8 337 138-606 16-409 (662)
170 2oiz_A Aromatic amine dehydrog 99.7 5.9E-14 2E-18 139.3 30.3 292 166-588 29-357 (361)
171 3c5m_A Oligogalacturonate lyas 99.6 5.8E-15 2E-19 148.9 20.6 236 19-263 38-328 (396)
172 2gop_A Trilobed protease; beta 99.6 1.3E-13 4.5E-18 136.3 29.7 256 21-311 19-330 (347)
173 3c5m_A Oligogalacturonate lyas 99.6 9E-15 3.1E-19 147.6 21.4 304 148-565 38-382 (396)
174 1q7f_A NHL, brain tumor CG1071 99.6 3.5E-13 1.2E-17 129.3 30.1 234 17-263 30-279 (286)
175 1q7f_A NHL, brain tumor CG1071 99.6 9.7E-13 3.3E-17 126.2 33.2 151 450-607 123-279 (286)
176 2gop_A Trilobed protease; beta 99.6 8.6E-14 3E-18 137.7 24.9 225 18-263 60-330 (347)
177 3fvz_A Peptidyl-glycine alpha- 99.6 4.1E-13 1.4E-17 131.6 29.1 245 58-355 24-321 (329)
178 2oiz_A Aromatic amine dehydrog 99.6 5.8E-12 2E-16 124.9 33.0 147 111-264 14-182 (361)
179 3e5z_A Putative gluconolactona 99.6 1.2E-12 4.1E-17 126.2 27.3 234 18-263 29-285 (296)
180 2xdw_A Prolyl endopeptidase; a 99.6 1.2E-12 4.2E-17 142.5 28.8 241 19-264 127-414 (710)
181 2xdw_A Prolyl endopeptidase; a 99.6 2.7E-12 9.4E-17 139.7 31.0 230 26-261 81-363 (710)
182 1rwi_B Serine/threonine-protei 99.5 3.9E-12 1.3E-16 120.8 27.4 235 18-264 25-264 (270)
183 2dg1_A DRP35, lactonase; beta 99.5 2E-11 6.7E-16 119.9 31.4 235 18-255 46-301 (333)
184 3e5z_A Putative gluconolactona 99.5 2.1E-11 7E-16 117.5 30.8 253 140-556 22-278 (296)
185 2bkl_A Prolyl endopeptidase; m 99.5 2.8E-12 9.6E-17 139.2 24.6 239 18-264 122-397 (695)
186 2dg1_A DRP35, lactonase; beta 99.5 1.9E-11 6.5E-16 120.0 28.2 272 147-555 7-300 (333)
187 1qks_A Cytochrome CD1 nitrite 99.5 3.1E-10 1.1E-14 118.4 38.2 313 36-357 176-539 (567)
188 2z2n_A Virginiamycin B lyase; 99.5 8.3E-10 2.8E-14 106.1 38.0 235 17-263 15-254 (299)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.1E-11 1.4E-15 116.4 28.1 240 18-263 19-298 (314)
190 2bkl_A Prolyl endopeptidase; m 99.5 5.9E-12 2E-16 136.7 24.2 230 26-263 77-348 (695)
191 1qks_A Cytochrome CD1 nitrite 99.5 9.7E-10 3.3E-14 114.6 39.6 325 159-607 168-537 (567)
192 3no2_A Uncharacterized protein 99.4 1.2E-10 4.3E-15 110.3 29.4 214 28-252 5-231 (276)
193 3dsm_A Uncharacterized protein 99.4 2.3E-10 7.7E-15 111.8 28.5 264 166-564 15-301 (328)
194 2z2n_A Virginiamycin B lyase; 99.4 3.9E-09 1.3E-13 101.4 37.0 276 56-354 13-293 (299)
195 3g4e_A Regucalcin; six bladed 99.4 4E-10 1.4E-14 108.4 29.5 225 21-253 17-261 (297)
196 3no2_A Uncharacterized protein 99.4 2.2E-10 7.7E-15 108.5 27.2 193 67-275 3-203 (276)
197 1yr2_A Prolyl oligopeptidase; 99.4 3.2E-10 1.1E-14 123.9 29.8 231 26-263 116-392 (741)
198 3dsm_A Uncharacterized protein 99.4 6.9E-10 2.4E-14 108.4 29.0 241 19-274 46-308 (328)
199 2mad_H Methylamine dehydrogena 99.3 1.5E-09 5.3E-14 107.5 30.4 233 24-273 28-356 (373)
200 1yr2_A Prolyl oligopeptidase; 99.3 8.9E-11 3E-15 128.4 23.5 241 18-264 164-441 (741)
201 2ghs_A AGR_C_1268P; regucalcin 99.3 1.7E-09 5.9E-14 105.4 29.2 224 19-253 51-291 (326)
202 2qc5_A Streptogramin B lactona 99.3 2.6E-08 8.9E-13 95.6 37.2 236 16-263 19-259 (300)
203 2mad_H Methylamine dehydrogena 99.3 1.5E-08 5.1E-13 100.4 36.0 106 155-263 30-155 (373)
204 4a2l_A BT_4663, two-component 99.3 7E-06 2.4E-10 90.4 61.6 486 18-565 89-614 (795)
205 1xip_A Nucleoporin NUP159; bet 99.3 1.6E-10 5.3E-15 113.5 17.7 177 59-252 39-232 (388)
206 3sjl_D Methylamine dehydrogena 99.3 5.8E-09 2E-13 101.9 28.3 282 153-567 40-365 (386)
207 3hrp_A Uncharacterized protein 99.2 4.3E-09 1.5E-13 105.8 28.3 236 18-262 132-408 (409)
208 1rwi_B Serine/threonine-protei 99.2 3.2E-09 1.1E-13 100.4 23.9 199 18-221 68-266 (270)
209 4a2l_A BT_4663, two-component 99.2 1.4E-05 5E-10 87.8 59.2 516 18-606 44-612 (795)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 6.9E-08 2.3E-12 93.4 32.6 115 451-566 175-300 (314)
211 2qc5_A Streptogramin B lactona 99.2 3.7E-08 1.3E-12 94.5 30.4 232 17-262 62-298 (300)
212 3iuj_A Prolyl endopeptidase; h 99.2 3.1E-09 1.1E-13 115.0 24.7 237 20-264 132-405 (693)
213 3c75_H MADH, methylamine dehyd 99.2 1.7E-08 5.8E-13 100.5 27.2 280 155-567 82-404 (426)
214 3c75_H MADH, methylamine dehyd 99.1 6.6E-09 2.2E-13 103.5 23.3 237 26-274 82-409 (426)
215 3iuj_A Prolyl endopeptidase; h 99.1 6E-09 2E-13 112.8 23.2 200 55-263 126-358 (693)
216 3hrp_A Uncharacterized protein 99.1 5.9E-08 2E-12 97.5 28.9 198 59-263 132-353 (409)
217 3sjl_D Methylamine dehydrogena 99.1 6.3E-08 2.2E-12 94.6 26.7 222 22-252 38-298 (386)
218 1xip_A Nucleoporin NUP159; bet 99.1 4.4E-09 1.5E-13 103.2 18.0 172 18-206 39-231 (388)
219 3dr2_A Exported gluconolactona 99.0 4.9E-08 1.7E-12 94.1 24.3 221 21-255 49-298 (305)
220 3g4e_A Regucalcin; six bladed 99.0 4.1E-07 1.4E-11 87.2 29.4 197 58-263 13-228 (297)
221 1mda_H Methylamine dehydrogena 99.0 5.8E-08 2E-12 95.1 22.8 226 38-275 47-354 (368)
222 2qe8_A Uncharacterized protein 99.0 1.2E-07 4.1E-12 93.0 25.4 111 450-561 197-317 (343)
223 2qe8_A Uncharacterized protein 99.0 3.4E-08 1.2E-12 97.0 19.5 242 17-261 17-318 (343)
224 3dr2_A Exported gluconolactona 98.9 2.2E-07 7.6E-12 89.5 24.5 205 53-275 40-274 (305)
225 2ghs_A AGR_C_1268P; regucalcin 98.9 8.9E-07 3.1E-11 86.1 27.7 192 60-263 51-259 (326)
226 2ece_A 462AA long hypothetical 98.8 5.3E-06 1.8E-10 81.6 27.3 97 155-252 93-206 (462)
227 3v9f_A Two-component system se 98.7 0.0012 3.9E-08 72.5 68.0 529 18-565 20-611 (781)
228 1npe_A Nidogen, entactin; glyc 98.6 3.1E-05 1.1E-09 72.6 27.9 223 17-246 36-263 (267)
229 1mda_H Methylamine dehydrogena 98.6 1.4E-06 4.9E-11 85.2 18.9 204 18-227 67-354 (368)
230 1kb0_A Quinohemoprotein alcoho 98.6 1.7E-05 5.9E-10 84.9 26.7 135 456-593 321-535 (677)
231 2ece_A 462AA long hypothetical 98.6 7.7E-06 2.6E-10 80.5 21.5 224 26-252 93-399 (462)
232 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00025 8.6E-09 70.1 32.1 291 35-353 61-375 (376)
233 3hxj_A Pyrrolo-quinoline quino 98.5 2.6E-06 8.8E-11 82.9 17.1 296 23-353 26-321 (330)
234 1fwx_A Nitrous oxide reductase 98.5 9.5E-07 3.3E-11 90.1 14.1 226 25-253 98-407 (595)
235 1npe_A Nidogen, entactin; glyc 98.5 0.00025 8.6E-09 66.3 29.9 236 29-275 2-246 (267)
236 3s94_A LRP-6, low-density lipo 98.5 0.002 7E-08 67.8 52.8 229 29-263 10-242 (619)
237 1kb0_A Quinohemoprotein alcoho 98.5 4.8E-05 1.6E-09 81.5 27.2 240 28-276 129-516 (677)
238 3v9f_A Two-component system se 98.5 0.0032 1.1E-07 68.9 59.2 520 19-563 68-654 (781)
239 1yiq_A Quinohemoprotein alcoho 98.5 4.7E-05 1.6E-09 81.8 26.8 268 35-313 78-506 (689)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00079 2.7E-08 66.5 33.0 299 69-392 53-374 (376)
241 2hz6_A Endoplasmic reticulum t 98.4 1.2E-07 4.1E-12 93.9 3.4 179 68-263 8-191 (369)
242 1yiq_A Quinohemoprotein alcoho 98.3 0.00012 4.2E-09 78.5 25.9 240 28-275 122-513 (689)
243 3hxj_A Pyrrolo-quinoline quino 98.3 3.3E-05 1.1E-09 74.9 19.8 217 27-263 107-323 (330)
244 2fp8_A Strictosidine synthase; 98.3 0.00026 8.9E-09 68.4 25.0 237 19-263 21-312 (322)
245 2iwa_A Glutamine cyclotransfer 98.3 0.00011 3.9E-09 67.7 21.0 196 59-263 22-236 (266)
246 2hz6_A Endoplasmic reticulum t 98.3 4.7E-07 1.6E-11 89.6 4.4 195 34-246 16-216 (369)
247 2xe4_A Oligopeptidase B; hydro 98.3 0.00015 5.1E-09 78.9 24.4 201 55-261 170-395 (751)
248 3nol_A Glutamine cyclotransfer 98.2 0.00021 7.1E-09 65.1 21.0 185 59-253 44-244 (262)
249 3s94_A LRP-6, low-density lipo 98.2 0.012 4E-07 62.0 55.0 205 16-224 39-248 (619)
250 2p4o_A Hypothetical protein; p 98.1 0.0031 1E-07 60.2 28.4 223 17-254 32-278 (306)
251 2xe4_A Oligopeptidase B; hydro 98.1 0.00026 8.8E-09 77.0 22.7 192 20-217 177-398 (751)
252 2fp8_A Strictosidine synthase; 98.1 0.00096 3.3E-08 64.3 24.1 235 60-311 21-312 (322)
253 3nok_A Glutaminyl cyclase; bet 98.0 0.001 3.5E-08 60.6 21.0 183 59-252 56-253 (268)
254 3qqz_A Putative uncharacterize 98.0 0.0074 2.5E-07 55.2 26.0 193 17-216 27-250 (255)
255 1ijq_A LDL receptor, low-densi 97.9 0.015 5.3E-07 55.5 31.4 229 30-263 3-237 (316)
256 3ei3_A DNA damage-binding prot 97.9 0.052 1.8E-06 61.4 54.8 145 459-608 844-999 (1158)
257 2iwa_A Glutamine cyclotransfer 97.9 0.003 1E-07 58.1 22.5 192 18-219 22-237 (266)
258 3v65_B Low-density lipoprotein 97.9 0.0093 3.2E-07 58.9 27.4 202 17-222 116-321 (386)
259 1k3i_A Galactose oxidase precu 97.9 0.0032 1.1E-07 67.3 25.7 113 150-264 190-323 (656)
260 3mbr_X Glutamine cyclotransfer 97.9 0.004 1.4E-07 56.1 21.9 186 58-253 21-223 (243)
261 3v64_C Agrin; beta propeller, 97.9 0.016 5.3E-07 56.4 27.8 201 17-221 73-277 (349)
262 1k3i_A Galactose oxidase precu 97.8 0.0015 5E-08 70.0 22.1 231 20-253 189-530 (656)
263 4hw6_A Hypothetical protein, I 97.8 0.011 3.6E-07 59.4 27.0 239 18-262 140-431 (433)
264 1fwx_A Nitrous oxide reductase 97.8 0.00082 2.8E-08 68.7 18.4 196 62-264 89-361 (595)
265 2xbg_A YCF48-like protein; pho 97.8 0.018 6.1E-07 55.4 27.3 229 18-261 81-319 (327)
266 3v65_B Low-density lipoprotein 97.8 0.036 1.2E-06 54.6 30.2 227 28-262 87-316 (386)
267 3nol_A Glutamine cyclotransfer 97.8 0.0031 1E-07 57.4 19.5 162 103-275 45-209 (262)
268 4a0p_A LRP6, LRP-6, low-densit 97.8 0.058 2E-06 56.8 59.8 208 11-223 31-241 (628)
269 1kv9_A Type II quinohemoprotei 97.7 0.0092 3.1E-07 63.7 26.1 189 32-224 71-338 (668)
270 3tc9_A Hypothetical hydrolase; 97.7 0.012 4.1E-07 59.0 25.6 152 18-174 138-298 (430)
271 3ei3_A DNA damage-binding prot 97.7 0.11 3.7E-06 58.8 59.4 526 25-564 43-635 (1158)
272 3sov_A LRP-6, low-density lipo 97.7 0.037 1.3E-06 52.9 28.1 228 30-263 6-237 (318)
273 2ism_A Putative oxidoreductase 97.7 0.006 2E-07 59.4 21.7 227 18-252 32-333 (352)
274 3v64_C Agrin; beta propeller, 97.7 0.046 1.6E-06 53.0 31.7 227 28-262 44-273 (349)
275 2ad6_A Methanol dehydrogenase 97.7 0.039 1.3E-06 57.5 28.6 238 28-275 116-502 (571)
276 3qqz_A Putative uncharacterize 97.6 0.037 1.3E-06 50.5 26.1 200 55-261 24-250 (255)
277 2p4o_A Hypothetical protein; p 97.6 0.025 8.6E-07 53.8 24.8 196 59-263 33-241 (306)
278 1ijq_A LDL receptor, low-densi 97.6 0.051 1.7E-06 51.9 27.9 201 17-221 30-240 (316)
279 1kv9_A Type II quinohemoprotei 97.6 0.0085 2.9E-07 64.0 23.3 237 31-275 121-496 (668)
280 3a9g_A Putative uncharacterize 97.6 0.024 8.3E-07 55.1 24.2 229 18-252 30-330 (354)
281 1w6s_A Methanol dehydrogenase 97.5 0.078 2.7E-06 55.4 28.1 188 36-226 72-349 (599)
282 3p5b_L Low density lipoprotein 97.5 0.11 3.6E-06 51.5 29.2 205 16-223 111-324 (400)
283 2g8s_A Glucose/sorbosone dehyd 97.4 0.077 2.6E-06 51.5 25.5 104 18-121 19-150 (353)
284 3m0c_C LDL receptor, low-densi 97.4 0.23 7.7E-06 53.7 30.3 229 29-262 396-630 (791)
285 3p5b_L Low density lipoprotein 97.4 0.14 4.8E-06 50.6 31.1 229 29-262 84-318 (400)
286 2ad6_A Methanol dehydrogenase 97.3 0.12 4.2E-06 53.7 27.6 187 36-226 72-342 (571)
287 3sov_A LRP-6, low-density lipo 97.3 0.12 4.1E-06 49.3 27.0 202 17-222 35-241 (318)
288 1w6s_A Methanol dehydrogenase 97.3 0.22 7.4E-06 52.0 31.3 77 511-590 451-528 (599)
289 3nok_A Glutaminyl cyclase; bet 97.3 0.013 4.4E-07 53.4 16.9 159 103-275 57-218 (268)
290 2xbg_A YCF48-like protein; pho 97.3 0.13 4.6E-06 49.2 34.2 270 18-309 37-319 (327)
291 3mbr_X Glutamine cyclotransfer 97.2 0.11 3.6E-06 46.8 24.5 162 102-275 22-187 (243)
292 4hw6_A Hypothetical protein, I 97.2 0.23 7.9E-06 49.6 27.6 199 60-262 141-372 (433)
293 1flg_A Protein (quinoprotein e 97.2 0.19 6.4E-06 52.5 26.6 60 209-275 465-524 (582)
294 3kya_A Putative phosphatase; s 97.1 0.28 9.7E-06 49.4 25.9 241 18-263 140-474 (496)
295 4a0p_A LRP6, LRP-6, low-densit 97.0 0.43 1.5E-05 50.1 59.3 226 29-263 7-236 (628)
296 3tc9_A Hypothetical hydrolase; 97.0 0.035 1.2E-06 55.6 18.1 153 450-607 139-300 (430)
297 3das_A Putative oxidoreductase 97.0 0.29 9.8E-06 46.9 24.9 231 18-252 33-326 (347)
298 3m0c_C LDL receptor, low-densi 96.9 0.65 2.2E-05 50.1 29.2 158 17-176 424-588 (791)
299 1n7d_A LDL receptor, low-densi 96.9 0.011 3.8E-07 63.3 14.4 204 18-226 407-621 (699)
300 1n7d_A LDL receptor, low-densi 96.8 0.0074 2.5E-07 64.7 12.5 230 29-263 378-613 (699)
301 3amr_A 3-phytase; beta-propell 96.7 0.38 1.3E-05 45.8 21.7 191 21-218 30-262 (355)
302 1flg_A Protein (quinoprotein e 96.4 1.2 4E-05 46.4 32.3 195 28-226 69-362 (582)
303 3sre_A PON1, serum paraoxonase 96.4 0.2 6.8E-06 48.2 18.0 186 22-209 55-287 (355)
304 3kya_A Putative phosphatase; s 96.4 0.34 1.2E-05 48.8 20.1 155 60-216 141-338 (496)
305 2xzh_A Clathrin heavy chain 1; 96.0 1 3.5E-05 42.1 25.5 236 21-263 71-331 (365)
306 2p9w_A MAL S 1 allergenic prot 95.9 0.39 1.3E-05 45.3 16.9 155 450-607 15-214 (334)
307 3s25_A Hypothetical 7-bladed b 95.8 1.3 4.5E-05 41.5 20.4 211 25-263 22-254 (302)
308 2p9w_A MAL S 1 allergenic prot 95.7 0.59 2E-05 44.0 17.1 158 61-219 16-215 (334)
309 3pbp_A Nucleoporin NUP82; beta 95.5 1.8 6.3E-05 42.1 20.1 66 22-88 26-95 (452)
310 3sre_A PON1, serum paraoxonase 95.5 1.9 6.4E-05 41.4 29.1 197 61-262 53-296 (355)
311 1tl2_A L10, protein (tachylect 95.4 0.56 1.9E-05 41.2 14.6 103 449-558 42-156 (236)
312 1bpo_A Protein (clathrin); cla 95.4 2.2 7.6E-05 41.7 28.3 235 21-263 70-330 (494)
313 1cru_A Protein (soluble quinop 95.0 2 6.8E-05 43.0 19.6 104 450-553 29-162 (454)
314 2ism_A Putative oxidoreductase 94.9 0.88 3E-05 43.9 16.3 100 450-552 33-152 (352)
315 3das_A Putative oxidoreductase 94.9 1.1 3.9E-05 42.8 16.6 53 59-111 33-90 (347)
316 1cru_A Protein (soluble quinop 94.8 2.7 9.4E-05 42.0 20.1 104 18-121 28-164 (454)
317 3a9g_A Putative uncharacterize 94.5 3.7 0.00013 39.5 21.1 186 17-206 73-329 (354)
318 3pbp_A Nucleoporin NUP82; beta 94.1 0.51 1.7E-05 46.0 12.1 98 20-117 69-196 (452)
319 1tl2_A L10, protein (tachylect 94.0 1 3.5E-05 39.5 12.7 97 21-122 45-155 (236)
320 3s25_A Hypothetical 7-bladed b 93.9 1.6 5.5E-05 40.9 15.2 166 22-207 58-241 (302)
321 3amr_A 3-phytase; beta-propell 93.6 5.2 0.00018 38.0 25.1 76 444-521 176-262 (355)
322 2vpj_A Kelch-like protein 12; 93.6 4.7 0.00016 37.5 18.8 215 37-263 31-277 (301)
323 1xi4_A Clathrin heavy chain; a 92.4 8.9 0.00031 43.7 19.8 235 21-263 70-330 (1630)
324 2vpj_A Kelch-like protein 12; 92.1 4.2 0.00014 37.8 15.4 144 458-607 112-277 (301)
325 3ii7_A Kelch-like protein 7; p 91.2 4.1 0.00014 38.0 14.3 145 458-607 101-271 (306)
326 2g8s_A Glucose/sorbosone dehyd 90.7 4.2 0.00014 39.1 14.0 102 450-552 20-147 (353)
327 2xn4_A Kelch-like protein 2; s 90.7 10 0.00036 35.1 20.2 213 37-263 30-275 (302)
328 2xn4_A Kelch-like protein 2; s 90.0 6.6 0.00022 36.5 14.5 145 458-607 108-275 (302)
329 1xi4_A Clathrin heavy chain; a 89.4 25 0.00085 40.2 19.8 215 36-264 47-289 (1630)
330 1zgk_A Kelch-like ECH-associat 89.1 6.2 0.00021 36.8 13.7 145 458-607 121-286 (308)
331 2wg3_C Hedgehog-interacting pr 89.0 20 0.00068 35.8 27.0 105 18-122 15-160 (463)
332 1zgk_A Kelch-like ECH-associat 88.2 6 0.00021 36.9 12.9 134 469-607 90-239 (308)
333 3ii7_A Kelch-like protein 7; p 87.4 18 0.00062 33.4 21.2 214 37-264 24-272 (306)
334 2woz_A Kelch repeat and BTB do 84.7 19 0.00064 33.6 14.3 139 455-598 53-216 (318)
335 2zwa_A Leucine carboxyl methyl 84.4 16 0.00055 38.8 14.9 109 458-567 451-579 (695)
336 3sbq_A Nitrous-oxide reductase 82.1 12 0.00041 37.9 11.6 75 448-522 323-408 (638)
337 2uvk_A YJHT; unknown function, 81.9 17 0.00058 34.6 13.0 96 458-555 19-128 (357)
338 2xzh_A Clathrin heavy chain 1; 81.4 36 0.0012 32.0 32.4 214 37-264 49-290 (365)
339 2zwa_A Leucine carboxyl methyl 81.2 37 0.0013 36.0 16.2 109 457-566 396-523 (695)
340 4gq2_M Nucleoporin NUP120; bet 79.0 62 0.0021 35.7 17.4 33 493-525 237-269 (950)
341 1bpo_A Protein (clathrin); cla 77.5 57 0.002 32.0 33.6 215 36-264 47-289 (494)
342 2uvk_A YJHT; unknown function, 77.4 14 0.00046 35.3 10.6 50 513-563 168-224 (357)
343 2wg3_C Hedgehog-interacting pr 76.7 36 0.0012 33.8 13.6 105 450-554 16-158 (463)
344 3ott_A Two-component system se 75.5 90 0.0031 33.3 57.3 223 19-260 65-303 (758)
345 4asc_A Kelch repeat and BTB do 69.6 70 0.0024 29.5 20.7 60 31-90 7-78 (315)
346 2woz_A Kelch repeat and BTB do 67.9 76 0.0026 29.3 22.6 185 30-221 17-233 (318)
347 2be1_A Serine/threonine-protei 64.8 12 0.00042 35.4 6.6 105 461-566 12-131 (339)
348 3zwu_A Alkaline phosphatase PH 62.4 21 0.00071 36.8 8.2 56 19-74 478-547 (592)
349 3sbq_A Nitrous-oxide reductase 58.0 38 0.0013 34.4 8.8 72 494-565 325-408 (638)
350 3zwu_A Alkaline phosphatase PH 56.6 38 0.0013 34.8 9.0 60 493-552 477-548 (592)
351 4a9v_A PHOX; hydrolase, beta-p 54.2 39 0.0013 34.4 8.4 58 18-75 477-548 (592)
352 3f7f_A Nucleoporin NUP120; nuc 53.4 2.2E+02 0.0076 29.9 15.4 31 493-525 223-253 (729)
353 4a9v_A PHOX; hydrolase, beta-p 51.8 73 0.0025 32.5 9.9 60 492-552 476-548 (592)
354 4asc_A Kelch repeat and BTB do 51.0 1.5E+02 0.0051 27.2 25.0 102 158-264 99-221 (315)
355 4gq2_M Nucleoporin NUP120; bet 45.1 82 0.0028 34.8 10.0 34 59-92 237-270 (950)
356 3f7f_A Nucleoporin NUP120; nuc 40.4 1.1E+02 0.0037 32.2 9.3 82 8-92 153-254 (729)
357 4hvt_A Ritya.17583.B, post-pro 39.8 3.6E+02 0.012 28.4 16.4 198 60-263 131-380 (711)
358 4fhn_B Nucleoporin NUP120; pro 34.0 61 0.0021 36.7 7.0 34 60-93 240-273 (1139)
359 2be1_A Serine/threonine-protei 32.3 1.1E+02 0.0039 28.7 7.4 61 505-565 12-76 (339)
360 3mez_A Mannose-specific lectin 30.5 1.7E+02 0.0059 22.0 8.4 79 20-117 22-100 (111)
361 4fhn_B Nucleoporin NUP120; pro 30.5 1.8E+02 0.006 32.9 10.0 33 493-525 239-271 (1139)
362 3mez_B Mannose-specific lectin 27.7 2E+02 0.0067 21.7 10.8 78 20-116 26-103 (113)
363 3qhy_B Beta-lactamase inhibito 26.2 3.6E+02 0.012 24.3 24.0 65 325-395 24-89 (282)
364 4gz8_A Semaphorin-3A; multi-do 25.4 3.1E+02 0.011 28.6 9.8 62 456-517 424-495 (667)
365 3mez_A Mannose-specific lectin 23.9 1.1E+02 0.0037 23.1 4.7 52 18-75 50-101 (111)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.5e-79 Score=655.74 Aligned_cols=594 Identities=30% Similarity=0.590 Sum_probs=486.2
Q ss_pred CcceeecCCCccCcCceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEE
Q 007283 3 QLAETYTCVPSTERGRGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVR 82 (609)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~ 82 (609)
++.++|++.|..+||.+..++++|||+.|+++.++.++||++.++.....+.+|.+.|++++|||||++||||+.|++||
T Consensus 5 ~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~ 84 (611)
T 1nr0_A 5 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVR 84 (611)
T ss_dssp EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccccEECCCCCcccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEE
Confidence 89999999999999999999999999999999889999999998888888999999999999999999999999999999
Q ss_pred EEcCCCCc-eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEE
Q 007283 83 IWGAHNDH-VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRI 161 (609)
Q Consensus 83 vWd~~~~~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i 161 (609)
|||+.+++ .+...+..|.++|.+++|+|||++|++++++.+. ..+++.|+.+.....+.+|...|.+++|+|+++.++
T Consensus 85 lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~-~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l 163 (611)
T 1nr0_A 85 IWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER-FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRI 163 (611)
T ss_dssp EEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSC-SEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEE
T ss_pred EeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCc-eeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEE
Confidence 99997544 3445678899999999999999999999876432 457899999888888999999999999999998789
Q ss_pred EEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCc----CCCCccceE
Q 007283 162 ATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSP----EDGHKGSVY 237 (609)
Q Consensus 162 ~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~h~~~V~ 237 (609)
++|+.|+++++|+.++++....+.+|...|++++|+|||++|++++.|++|++||..+++.+..+.. ..+|.+.|.
T Consensus 164 ~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 164 ISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 9999999999999999988889999999999999999999999999999999999988887655521 127999999
Q ss_pred EEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCc
Q 007283 238 AVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSP 317 (609)
Q Consensus 238 ~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~ 317 (609)
+++|+|++++|++++.|++|++||+.. ++...++... .........+.|.+..+++++.++.+++|+..... ..
T Consensus 244 ~v~~spdg~~l~s~s~D~~v~lWd~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~-~~ 317 (611)
T 1nr0_A 244 GLTWSPDGTKIASASADKTIKIWNVAT---LKVEKTIPVG--TRIEDQQLGIIWTKQALVSISANGFINFVNPELGS-ID 317 (611)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEECC--SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTE-EE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCC---CceeeeecCC--CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCC-cc
Confidence 999999999999999999999999873 4555555432 22334456667788899999999999999976432 33
Q ss_pred eeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceec-cccccceeEeee-eCCcEEEEeccceEEEEecc
Q 007283 318 LQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQ-RKENSQIKCFAA-IEEEIVTSGFDNKIWRVSLQ 395 (609)
Q Consensus 318 ~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~ 395 (609)
..+.+|...|.++++++ +++++++++.|++|++|+...+...... ..+...+.++.+ .++.+++++.|+.++.|+..
T Consensus 318 ~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 318 QVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSS
T ss_pred eEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecC
Confidence 56789999999999975 5689999999999999998765433222 234556666666 45678899999999999876
Q ss_pred CCccccccc--cccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEE
Q 007283 396 GDQCGYANS--IDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRV 473 (609)
Q Consensus 396 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~i 473 (609)
......... ..+...+..+.+..+. ..++...+..+.++.... ...+.+...+.+++++|||+++|+|+.|++|++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~~~~~~~~~v~~~~~~~-~~~~~~~~~v~~va~spdg~~lasgs~D~~v~l 474 (611)
T 1nr0_A 397 GSGVDSSKAVANKLSSQPLGLAVSADG-DIAVAACYKHIAIYSHGK-LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHV 474 (611)
T ss_dssp SSSSCTTSCCEEECSSCEEEEEECTTS-SCEEEEESSEEEEEETTE-EEEEECSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred CccccccceeeeecCCCCcEEEEeCCC-cEEEEEeCceEEEEeCCc-eeeeecCCCceEEEEeCCCCEEEEeCCCCeEEE
Confidence 543211000 1112222223333222 344455666677777555 555566778999999999999999999999999
Q ss_pred EEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEee--ecCCCCceEEEEECCCCcEEEE
Q 007283 474 YSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKN--MLYHTARINCLAWSPNNSMVAT 551 (609)
Q Consensus 474 w~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--~~~h~~~i~~l~~s~d~~~l~s 551 (609)
|++.++.+..... .+|.+.|++|+|||||++|++++.|+++++||+.+....... +..|...|++++||||+++||+
T Consensus 475 wd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~las 553 (611)
T 1nr0_A 475 YKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 553 (611)
T ss_dssp EEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEE
T ss_pred EEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEE
Confidence 9998765543333 689999999999999999999999999999998763222221 2349999999999999999999
Q ss_pred EeCCCeEEEEEcCCCCCcceeEeccc-cCCeEEEEEcCCCeEEEEeCCCcEEEEEcc
Q 007283 552 GSLDTCVIIYEIDKPASSRMTIKGAH-LGGVYGLAFTDEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 552 ~s~D~~v~vw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~l~s~s~D~~i~~W~~~ 607 (609)
|+.|++|++|+++.+.......+.+| ...|++++|+++..|+|+|.|++|++|++.
T Consensus 554 gs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 554 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred EECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCEEEEecCCCCEEEEecc
Confidence 99999999999986442222566789 899999999955559999999999999984
No 2
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-64 Score=544.20 Aligned_cols=575 Identities=32% Similarity=0.573 Sum_probs=474.9
Q ss_pred CcceeecCCCccCcCceeEEeecCCCCeEEEeCCCEEEEEeCCCC----ccccccccCCCC-cEEEEECC--CCCEEEEE
Q 007283 3 QLAETYTCVPSTERGRGILISGHPKSNSILYTNGRSVIILDLSNP----LQVSIYGEHAYP-ATVARFSP--NGEWIASA 75 (609)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~----~~~~~~~~h~~~-v~~~~~sp--~g~~las~ 75 (609)
++.+.|++.|..+++.+..++++|+|+.|+++.++.+.||++.++ +....+.+|.+. |++++|+| +|++||++
T Consensus 5 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 5 SLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp EEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEE
T ss_pred chhhccCCCCCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEe
Confidence 688999999999999999999999999999998899999999988 777889999999 99999999 99999999
Q ss_pred eCCCcEEEEcCCCC-------ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccE
Q 007283 76 DVSGTVRIWGAHND-------HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRV 148 (609)
Q Consensus 76 ~~d~~i~vWd~~~~-------~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 148 (609)
+.||+|+|||+.++ ..+...+..|...|.+++|+|||++|++++++.+. ...++.|+.+..+..+.+|...|
T Consensus 85 ~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~v~~~d~~~~~~~~~~~~~~v 163 (615)
T 1pgu_A 85 DESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN-FGVFISWDSGNSLGEVSGHSQRI 163 (615)
T ss_dssp ETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC-SEEEEETTTCCEEEECCSCSSCE
T ss_pred cCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC-ccEEEEEECCCcceeeecCCccE
Confidence 99999999999754 23445677889999999999999999999865432 45789999989999999999999
Q ss_pred EEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCccc---ceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcccc
Q 007283 149 LSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSN---FVNCVRFSPD-GSKFISVSSDKKGIIYDGKTADKIG 224 (609)
Q Consensus 149 ~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~---~v~~l~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~ 224 (609)
.+++|+|+++..+++++.|+.+++||..+++....+.+|.. .|++++|+|+ +++|++++.|+.+++||..+++.+.
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 243 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeE
Confidence 99999999987799999999999999999999989999999 9999999999 9999999999999999999988776
Q ss_pred cc-CcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEE-cCCeEEEEEcC
Q 007283 225 EL-SPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLW-QNDFLVIVSLG 302 (609)
Q Consensus 225 ~~-~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 302 (609)
.+ ....+|.+.|.+++|+ ++++|++++.|+.|++||+.. ++....+.... .........+.+ .+.++++++.+
T Consensus 244 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 244 YIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT---SKCVQKWTLDK-QQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp ECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT---TEEEEEEECCT-TCGGGCEEEEEEEETTEEEEEETT
T ss_pred EecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC---CcEEEEEcCCC-CcccCceeEEEeCCCCeEEEEECC
Confidence 65 2111689999999999 999999999999999999873 45555554332 122233344444 67799999999
Q ss_pred CcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeee-CCcEE
Q 007283 303 GTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI-EEEIV 381 (609)
Q Consensus 303 g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 381 (609)
+.+++|+... ......+.+|...|.++++ +. +++++.||.|++|+.. .....+...+.++... +..++
T Consensus 319 g~i~~~d~~~-~~~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~-----~~~~~~~~~v~~~~~~~~~~l~ 387 (615)
T 1pgu_A 319 GTLNFYELGH-DEVLKTISGHNKGITALTV-NP----LISGSYDGRIMEWSSS-----SMHQDHSNLIVSLDNSKAQEYS 387 (615)
T ss_dssp SCEEEEETTE-EEEEEEECCCSSCEEEEET-TT----TEEEETTSCEEETTTT-----EEECCCCSCEEEEECCSTTCCE
T ss_pred CCEEEEECCC-CcEEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEEch-----hhcCcccCceEEEEECCCcEEE
Confidence 9999999765 2334567899999999998 43 9999999999999876 1113455667777764 56788
Q ss_pred EEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEee--CCeeeEEeccCCceeEEEEcCCC
Q 007283 382 TSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLR--GAEVVSTINLRFPVTASAIAPDG 459 (609)
Q Consensus 382 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~sp~g 459 (609)
+++.|+.+..|++...... .....+.+..+. ..++...+..+.++. ..+....+.+..++.+++++ +
T Consensus 388 ~~~~d~~i~~~~~~~~~~~--------~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 456 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFG--------SQPKVASANNDG-FTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--Q 456 (615)
T ss_dssp EEETTTEEEETTEEEEECS--------SCEEEEEECSSS-EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--S
T ss_pred EEeCCCCEEEEEcccCccc--------CCceEEEEcCCC-CEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--C
Confidence 9999999999987654321 012223332322 334444556677776 56666677778889999999 8
Q ss_pred CEEEEEeC-CCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecC-CCCce
Q 007283 460 SEAIIGSQ-DGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY-HTARI 537 (609)
Q Consensus 460 ~~l~~gs~-dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~-h~~~i 537 (609)
+++++|+. |+.|++|++..+.+.. ..+.+|...|.+++|+|+++++++++.|+.+++||+.+.+.. ..+.. |...|
T Consensus 457 ~~l~~~~~~d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~h~~~v 534 (615)
T 1pgu_A 457 NYVAVGLEEGNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK-TSRWAFRTSKI 534 (615)
T ss_dssp SEEEEEETTTSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-ECCSCCCSSCE
T ss_pred CEEEEeecCCCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcce-eEeecCCCCce
Confidence 99999999 9999999998765432 566789999999999999999999999999999999877654 34555 99999
Q ss_pred EEEEECC----------CCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEc
Q 007283 538 NCLAWSP----------NNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRL 606 (609)
Q Consensus 538 ~~l~~s~----------d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~ 606 (609)
++++|+| ++++||+++.|++|++|++.... .......+|.+.|++++|+ +++ |+++|.|++|++|++
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred eEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEee
Confidence 9999999 99999999999999999998643 3455667899999999999 667 999999999999999
Q ss_pred cCC
Q 007283 607 TPN 609 (609)
Q Consensus 607 ~~~ 609 (609)
+++
T Consensus 613 ~~~ 615 (615)
T 1pgu_A 613 VLE 615 (615)
T ss_dssp C--
T ss_pred ecC
Confidence 764
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.1e-62 Score=522.53 Aligned_cols=556 Identities=24% Similarity=0.377 Sum_probs=437.5
Q ss_pred cCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 14 TERGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
.|++....++++|||++|+++. ++.|+|||. +++.+..+.+|++.|++++|+|||++||+++.|++|+|||... + +
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~-~-~ 90 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-Q-L 90 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-C-E
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC-C-E
Confidence 5788888999999999999875 579999996 5667778999999999999999999999999999999999643 3 3
Q ss_pred eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 93 KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 93 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
...+..|...|.+++|+|||++|++++.+. .+++|+.. ........+|...|..+.++|++.. +++++.+..+.+
T Consensus 91 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~---~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~ 165 (577)
T 2ymu_A 91 LQTLTGHSSSVRGVAFSPDGQTIASASDDK---TVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKL 165 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETT-CCEEEEECCCSSCEEEEEECTTSSC-EEEEETTSEEEE
T ss_pred EEEEECCCCCEEEEEECCCCCEEEEEcCCC---ceeecccc-cceeeeccCCCCceeeeeeecCCcc-ceecccccceec
Confidence 456888999999999999999999988654 34555543 3445667889999999999999885 888889999999
Q ss_pred EeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
|+... ........|...|.++.|+|++++|++++.|+.+++||. +++.+..+ .+|.+.|.+++|+|++++|++++
T Consensus 166 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~---~~~~~~v~~~~~s~dg~~l~~~~ 240 (577)
T 2ymu_A 166 WNRNG-QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL---TGHSSSVRGVAFSPDGQTIASAS 240 (577)
T ss_dssp ECTTS-CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEE---ECCSSCEEEEEECTTSSCEEEEE
T ss_pred cccce-eeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEE---ecCCCCEEEEEECCCCCEEEEEe
Confidence 98543 344556678999999999999999999999999999995 45555444 37899999999999999999999
Q ss_pred CCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc--CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEE
Q 007283 253 ADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ--NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTAL 330 (609)
Q Consensus 253 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~ 330 (609)
.|+.|++||.. ++....+... . ..+..+.+. +..+++++.++.+++|+.+. .....+.+|...|.++
T Consensus 241 ~d~~i~~w~~~----~~~~~~~~~~-~----~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~--~~~~~~~~h~~~v~~~ 309 (577)
T 2ymu_A 241 DDKTVKLWNRN----GQLLQTLTGH-S----SSVNGVAFRPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVWGV 309 (577)
T ss_dssp TTSCEEEECTT----SCEEEEECCC-S----SCEEEEEECTTSSEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEE
T ss_pred CCCEEEEEeCC----CCEEEEEecC-C----CCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC--cEEEEEecCCCCeEEE
Confidence 99999999964 3445444322 1 122333443 55899999999999998642 3345678999999999
Q ss_pred EEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeee--CCcEEEEeccceEEEEeccCCccccccccccC
Q 007283 331 TVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI--EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIG 408 (609)
Q Consensus 331 ~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 408 (609)
++++ ++..+++++.|++|++|+......... ..+...+.++++. +..+++++.++.+.+|+...... .....+.
T Consensus 310 ~~~~-~~~~l~t~~~d~~i~~w~~~~~~~~~~-~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~--~~~~~~~ 385 (577)
T 2ymu_A 310 AFSP-DGQTIASASDDKTVKLWNRNGQHLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLL--QTLTGHS 385 (577)
T ss_dssp EECT-TSSEEEEEETTSCEEEEETTSCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEE--EEEECCS
T ss_pred EECC-CCCEEEEEeCCCeEEEEeCCCCeeEEE-eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEE--EEecCCC
Confidence 9875 557999999999999998765433222 2345566666663 45688888999999998644321 1111223
Q ss_pred CCCceeEeeccCCcEEEEEecccEEEee-CCeeeEEe-ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEE
Q 007283 409 SQPKDLSVALHYPELVLVSTDSGVVLLR-GAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAV 486 (609)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~ 486 (609)
.....+.+.++...++..+.+..+.+|+ ..+....+ .+..++.+++++||++++++++.|++|++|+..... ...
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~---~~~ 462 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQL---LQT 462 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCE---EEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCE---EEE
Confidence 3344455554443333334444566665 23333333 366789999999999999999999999999975443 356
Q ss_pred EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 487 LEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 487 ~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
+.+|...|.+++|+||++++++++.|++|++||... + .+..+.+|...|++++|+||+++||+++.|++|++||...
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~-~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~- 539 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG- 539 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS-
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-C-EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC-
Confidence 789999999999999999999999999999999643 3 3455778999999999999999999999999999999642
Q ss_pred CCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEE
Q 007283 567 ASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWR 605 (609)
Q Consensus 567 ~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~ 605 (609)
..+..+.+|.+.|++++|+ |+++|+|+|.|++|++||
T Consensus 540 --~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 540 --QLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp --CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 3455667899999999999 788999999999999997
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-57 Score=488.28 Aligned_cols=522 Identities=25% Similarity=0.390 Sum_probs=409.5
Q ss_pred ccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 50 VSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
...|.||++.|++++|||||++||||+.|++|+|||. +++ +...+.+|...|.+++|+|||++|++++.+. .+++
T Consensus 9 ~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~-~~~~l~gh~~~V~~l~fspdg~~las~~~d~---~i~v 83 (577)
T 2ymu_A 9 RNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ-LLQTLTGHSSSVWGVAFSPDGQTIASASDDK---TVKL 83 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC-EEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEE
T ss_pred eeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCC-EEEEEeCCCCCEEEEEECCCCCEEEEEeCCC---EEEE
Confidence 3558999999999999999999999999999999996 444 3457889999999999999999999988644 4677
Q ss_pred EEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC
Q 007283 130 FMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 209 (609)
|++ .+..+..+.+|...|.+++|+|++.. +++++.|+.+++|+.... ......+|...+.++.++|++..+++++.+
T Consensus 84 Wd~-~~~~~~~~~~~~~~v~~~~~s~d~~~-l~~~~~d~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 160 (577)
T 2ymu_A 84 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNGQ-LLQTLTGHSSSVWGVAFSPDGQTIASASDD 160 (577)
T ss_dssp EET-TSCEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCC-EEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEC-CCCEEEEEECCCCCEEEEEECCCCCE-EEEEcCCCceeecccccc-eeeeccCCCCceeeeeeecCCccceecccc
Confidence 775 45678889999999999999999985 999999999999996543 445567889999999999999999999999
Q ss_pred CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 210 KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+.+.+|+..... .... ..|...|.++.|+|++++|++++.|+.|++||.. ++....+.... ..+..+
T Consensus 161 ~~~~~~~~~~~~-~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~----~~~~~~~~~~~-----~~v~~~ 227 (577)
T 2ymu_A 161 KTVKLWNRNGQL-LQTL---TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN----GQLLQTLTGHS-----SSVRGV 227 (577)
T ss_dssp SEEEEECTTSCE-EEEE---ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT----SCEEEEEECCS-----SCEEEE
T ss_pred cceeccccceee-eeec---cCCCcceeeeeecCCCCEEEEEcCCCEEEEEeCC----CcEEEEEecCC-----CCEEEE
Confidence 999999855433 2222 3688899999999999999999999999999964 44555543221 122333
Q ss_pred EEc--CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccc
Q 007283 290 LWQ--NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKEN 367 (609)
Q Consensus 290 ~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~ 367 (609)
.+. +.++++++.++.+++|+.+ ......+.+|...|.++++.+ ++..+++++.|+.|++|+......... ..+.
T Consensus 228 ~~s~dg~~l~~~~~d~~i~~w~~~--~~~~~~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~~~~~~~~~-~~h~ 303 (577)
T 2ymu_A 228 AFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNRNGQLLQTL-TGHS 303 (577)
T ss_dssp EECTTSSCEEEEETTSCEEEECTT--SCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEE-CCCS
T ss_pred EECCCCCEEEEEeCCCEEEEEeCC--CCEEEEEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCcEEEEE-ecCC
Confidence 444 5589999999999999854 233456789999999999874 557999999999999998654322222 2345
Q ss_pred cceeEeeee--CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEeccc-EEEee-CCeeeEE
Q 007283 368 SQIKCFAAI--EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSG-VVLLR-GAEVVST 443 (609)
Q Consensus 368 ~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 443 (609)
..+..+.+. +..+++++.|+.+..|+....... ...........+.+.++. ..++....++ +.++. ..+....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~--~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~v~~~~~~~~~~~~ 380 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQ--TLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQLLQT 380 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE--EECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTCCEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeE--EEeCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEcCCCCEEEE
Confidence 566666663 456888999999999987654321 111112223333443333 4455554444 55664 3333333
Q ss_pred e-ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccC
Q 007283 444 I-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVS 522 (609)
Q Consensus 444 ~-~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~ 522 (609)
+ .+..++.+++++|||+++++|+.|+.|++|+..... ...+.+|...|.+++|+||++++++++.|+++++||...
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~---~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL---LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCE---EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE---EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 3 356789999999999999999999999999965432 356789999999999999999999999999999999644
Q ss_pred CceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcE
Q 007283 523 REVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACV 601 (609)
Q Consensus 523 ~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i 601 (609)
. .+..+..|...|++++|+||+++||+++.|++|++|+... .......+|...|++++|+ ++++|++++.|++|
T Consensus 458 ~--~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~---~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v 532 (577)
T 2ymu_A 458 Q--LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 532 (577)
T ss_dssp C--EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS---CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred C--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC---CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEE
Confidence 3 3445678999999999999999999999999999999642 3345567899999999999 78899999999999
Q ss_pred EEEEcc
Q 007283 602 RVWRLT 607 (609)
Q Consensus 602 ~~W~~~ 607 (609)
++|+++
T Consensus 533 ~lwd~~ 538 (577)
T 2ymu_A 533 KLWNRN 538 (577)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 999974
No 5
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6e-56 Score=476.13 Aligned_cols=525 Identities=18% Similarity=0.205 Sum_probs=391.0
Q ss_pred cCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCc--cccccccCCCCcEEEEECCCCCEEEEEeCC----CcEEEEcC
Q 007283 14 TERGRGILISGHPKSNSILYTN-GRSVIILDLSNPL--QVSIYGEHAYPATVARFSPNGEWIASADVS----GTVRIWGA 86 (609)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~--~~~~~~~h~~~v~~~~~sp~g~~las~~~d----~~i~vWd~ 86 (609)
.|.+....++++|+|++|+... ++.|+|||+.++. ....+.+|.+.|.+++|+|||++||+++.+ ++|++||.
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 4667778999999999999874 6899999996543 334578899999999999999999988765 47888885
Q ss_pred CCCceeeEEEeecccceeEEEECCCCC-EEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEec
Q 007283 87 HNDHVLKKEFRVLSGRIDDLQWSPDGL-RIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCG 165 (609)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~ 165 (609)
. +. ...+.+|.+.|.+++|+|++. +|++++++. .+++|+....+....+.+|...|.+++|+|++. .+++|+
T Consensus 137 ~--~~-~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~---~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s 209 (611)
T 1nr0_A 137 G--TS-NGNLTGQARAMNSVDFKPSRPFRIISGSDDN---TVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTG 209 (611)
T ss_dssp C--CB-CBCCCCCSSCEEEEEECSSSSCEEEEEETTS---CEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred C--CC-cceecCCCCCceEEEECCCCCeEEEEEeCCC---eEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEE
Confidence 3 22 235778999999999999987 577777654 477888777777888999999999999999998 599999
Q ss_pred CCCeEEEEeCCCCceeeecc-------CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEE
Q 007283 166 EDFLVNFYEGPPFKFKLSHR-------GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYA 238 (609)
Q Consensus 166 ~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~ 238 (609)
.|+.+++|+..+++....+. +|...|.+++|+|+|++|++++.|+++++||..+++.+..+.....+...+..
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~ 289 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 289 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEE
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEE
Confidence 99999999988887766663 79999999999999999999999999999999998877666433345556777
Q ss_pred EEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc--CCeEEEEEcCCcEEEEeCCCCCCC
Q 007283 239 VSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ--NDFLVIVSLGGTISIFSANDLEKS 316 (609)
Q Consensus 239 l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~ 316 (609)
+.| ++..+++++.|+++++|+... ++....+.. + ...+..+.++ +.++++++.|+++++|++......
T Consensus 290 ~~~--~~~~l~s~s~d~~i~~~~~~~---~~~~~~~~g-h----~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 290 IIW--TKQALVSISANGFINFVNPEL---GSIDQVRYG-H----NKAITALSSSADGKTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp EEE--CSSCEEEEETTCCEEEEETTT---TEEEEEECC-C----SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEE--cCCEEEEEeCCCcEEEEeCCC---CCcceEEcC-C----CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 777 678899999999999999863 333333321 1 2233444444 568999999999999998754321
Q ss_pred ceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCcccccee---ccccccceeEeeee-CCcEEEEeccceEEEE
Q 007283 317 PLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKL---QRKENSQIKCFAAI-EEEIVTSGFDNKIWRV 392 (609)
Q Consensus 317 ~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~ 392 (609)
.....+|...|.++++++. ..+++++.|+++++|+......... ..........+.+. ++..+....+..+..|
T Consensus 360 ~~~~~~h~~~v~~~~~s~~--~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~ 437 (611)
T 1nr0_A 360 RVFPDVHATMITGIKTTSK--GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 437 (611)
T ss_dssp ECSSCSCSSCEEEEEECTT--SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEE
T ss_pred eecccCCcceEEEEEECCC--CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEE
Confidence 1112579999999998743 5789999999999998764321110 00111223334442 2223333356677777
Q ss_pred eccCCccccccccccCCCCceeEeeccCCcEEEEEe-cccEEEee--CCee--eEEeccCCceeEEEEcCCCCEEEEEeC
Q 007283 393 SLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVST-DSGVVLLR--GAEV--VSTINLRFPVTASAIAPDGSEAIIGSQ 467 (609)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~--~~~~~~~~~~~~~~~sp~g~~l~~gs~ 467 (609)
+... .....+......+.+.+++ ..++.+. +..+.+|+ +... .....+...+.+++|+|||++||+++.
T Consensus 438 ~~~~-----~~~~~~~~~v~~va~spdg-~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~ 511 (611)
T 1nr0_A 438 SHGK-----LTEVPISYNSSCVALSNDK-QFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQ 511 (611)
T ss_dssp ETTE-----EEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred eCCc-----eeeeecCCCceEEEEeCCC-CEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcC
Confidence 6221 1111222333444555544 3444444 44566764 2222 223446778999999999999999999
Q ss_pred CCcEEEEEecC-CeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEE-eeecCC-CCceEEEEECC
Q 007283 468 DGKLRVYSIRG-DTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKL-KNMLYH-TARINCLAWSP 544 (609)
Q Consensus 468 dg~i~iw~~~~-~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~~h-~~~i~~l~~s~ 544 (609)
|++|++|++.. +.+.......+|.+.|.+++|+|||++||+|+.|++|++||+.+..... ..+.+| ...|++++|+|
T Consensus 512 d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~ 591 (611)
T 1nr0_A 512 SRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN 591 (611)
T ss_dssp TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE
T ss_pred CCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcC
Confidence 99999999976 4432211234599999999999999999999999999999987754322 446689 89999999999
Q ss_pred CCcEEEEEeCCCeEEEEEcC
Q 007283 545 NNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 545 d~~~l~s~s~D~~v~vw~~~ 564 (609)
|++ |++++.|++|++|+++
T Consensus 592 d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 592 ETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp TTE-EEEEETTSCEEEEECC
T ss_pred CCE-EEEecCCCCEEEEecc
Confidence 999 9999999999999973
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.9e-55 Score=509.68 Aligned_cols=536 Identities=17% Similarity=0.249 Sum_probs=425.3
Q ss_pred cCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 14 TERGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
+|.+....+.++|+|+.|+++. ++.|.+||+.++..+..+.+|.+.|.+++|+|+|++||+++.|++|+|||+.+++.
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~- 691 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL- 691 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce-
Confidence 4677888999999999998864 58999999999998888999999999999999999999999999999999998764
Q ss_pred eEEEeecccceeEEEECCC--CCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeE
Q 007283 93 KKEFRVLSGRIDDLQWSPD--GLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLV 170 (609)
Q Consensus 93 ~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i 170 (609)
...+..|...|.+++|+|+ +..+++++.+. .+++|+++.+..+..+.+|...|.+++|+|++. .+++|+.|+.+
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~---~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v 767 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF---FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTL 767 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTS---CEEEEETTSSSEEEEECCCSSCEEEEEECSSTT-EEEEEESSSEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCC---eEEEEECCCcchhheecCCCCCEEEEEEecCCC-EEEEEECCCeE
Confidence 4567889999999999995 44666665433 478899889999999999999999999999998 49999999999
Q ss_pred EEEeCCCCceeee-------------------------------------------------------ccCcccceEEEE
Q 007283 171 NFYEGPPFKFKLS-------------------------------------------------------HRGHSNFVNCVR 195 (609)
Q Consensus 171 ~~~~~~~~~~~~~-------------------------------------------------------~~~h~~~v~~l~ 195 (609)
++||....+.... ..+|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 9998654432111 126788999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCC---CceEE
Q 007283 196 FSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNH---GKLKK 272 (609)
Q Consensus 196 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~---~~~~~ 272 (609)
|+|++..+++++.|+.+.+||..++..+..+ .+|.+.|.+++|+|++++|++++.|++|++|++..... .....
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~---~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 924 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRLKVADC---RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCceeeec---CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccc
Confidence 9999999999999999999999998877665 37999999999999999999999999999999742100 00000
Q ss_pred E--------------ecc--------CCCCC----ccceEEEEEE--cCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCC
Q 007283 273 T--------------LTP--------SGSGG----VDDMLVGCLW--QNDFLVIVSLGGTISIFSANDLEKSPLQLSGHM 324 (609)
Q Consensus 273 ~--------------~~~--------~~~~~----~~~~~~~~~~--~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~ 324 (609)
. ... ..... ....+..+.+ ++.++++++.+|.+++|+.... .....+.+|.
T Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~-~~~~~~~~h~ 1003 (1249)
T 3sfz_A 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN-RVFSSGVGHK 1003 (1249)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT-SCEEECCCCS
T ss_pred eeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC-ceeeecccCC
Confidence 0 000 00000 0111223333 3568999999999999998654 3345677899
Q ss_pred CCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeee-eCCcEEEEeccceEEEEeccCCcccccc
Q 007283 325 KNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAA-IEEEIVTSGFDNKIWRVSLQGDQCGYAN 403 (609)
Q Consensus 325 ~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 403 (609)
..|.++++++ +++.+++++.||.|++|+...+..... ..+...+.++.. .+..+++++.|+.+..|++.....
T Consensus 1004 ~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~---- 1077 (1249)
T 3sfz_A 1004 KAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGDYVFL-QAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI---- 1077 (1249)
T ss_dssp SCCCCEEECS-SSSCEEEECSSSBEEEEETTTTEEECC-BCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC----
T ss_pred CceEEEEECC-CCCEEEEEcCCCEEEEEECCCCceEEE-ecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce----
Confidence 9999999875 457899999999999999876543322 234555666665 355688888899999998754431
Q ss_pred ccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe-ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeee
Q 007283 404 SIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLT 482 (609)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~ 482 (609)
...+ .+...+.+++++|+++++++|+.|++|++|++..+..
T Consensus 1078 -------------------------------------~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~- 1119 (1249)
T 3sfz_A 1078 -------------------------------------ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP- 1119 (1249)
T ss_dssp -------------------------------------CEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC-
T ss_pred -------------------------------------eEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce-
Confidence 0111 1335688899999999999999999999999987654
Q ss_pred eeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe--------eecCCCCceEEEEECCCCcEEEEEeC
Q 007283 483 EEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK--------NMLYHTARINCLAWSPNNSMVATGSL 554 (609)
Q Consensus 483 ~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~--------~~~~h~~~i~~l~~s~d~~~l~s~s~ 554 (609)
...+.+|.+.|.+++|+|||+++++|+.|++|++||+.+++.... ....|...|++++||||+++|++++
T Consensus 1120 -~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~- 1197 (1249)
T 3sfz_A 1120 -LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG- 1197 (1249)
T ss_dssp -SBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES-
T ss_pred -eeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC-
Confidence 356788999999999999999999999999999999887654221 1246889999999999999999885
Q ss_pred CCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 555 DTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 555 D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
|+|++||+..+. ......+|...|++++|+ ++.+|++++.||.+.+|++.
T Consensus 1198 -g~v~vwd~~~g~--~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1198 -GYLKWWNVATGD--SSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp -SSEEEBCSSSCB--CCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred -CeEEEEECCCCc--eeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 899999997643 234456789999999999 77899999999999999974
No 7
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-51 Score=458.00 Aligned_cols=546 Identities=13% Similarity=0.109 Sum_probs=369.7
Q ss_pred CCCccCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCC
Q 007283 10 CVPSTERGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHN 88 (609)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~ 88 (609)
.....+.+....++++|+|+.|+.+. ++.|+||+..+.+.... ..|...|.+++|+| |++||+++.|++|+|||+.+
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK-LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE-CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE-cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 33446677888999999999998874 68999999877655443 35788999999999 99999999999999999998
Q ss_pred CceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee-----------EEEecCCccEEEEEEeeCC
Q 007283 89 DHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV-----------GEFDGHSRRVLSCAFKPSR 157 (609)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~h~~~v~~~~~~p~~ 157 (609)
++.+. .+. +.+.|.+++|+|++++|++.+.+. .+++|+.+.+... ..+.+|...|.+++|+|++
T Consensus 89 ~~~~~-~~~-~~~~V~~v~~sp~g~~l~sgs~dg---~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 89 QKVLT-TVF-VPGKITSIDTDASLDWMLIGLQNG---SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp CSEEE-EEE-CSSCEEEEECCTTCSEEEEEETTS---CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred CcEEE-EEc-CCCCEEEEEECCCCCEEEEEcCCC---cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 76543 343 667899999999999999877543 4677877766542 2236789999999999987
Q ss_pred CeEEEEecCCCeEEEEeCCCCceeeeccCc------------------ccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 007283 158 PFRIATCGEDFLVNFYEGPPFKFKLSHRGH------------------SNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 158 ~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h------------------~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
...+++|+.|+.+ +||....+....+.+| ...|++++|+|+|++|++++.|++|++||.++
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS 242 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 6679999999999 9999888777666554 57899999999999999999999999999998
Q ss_pred Cccccc--cCcCC-------------CCccceEEEEEC----CCC-CeEEEEeCC-----CcEEEeecccCC--------
Q 007283 220 ADKIGE--LSPED-------------GHKGSVYAVSWS----PDG-KQVLTASAD-----KSAKVWDISEDN-------- 266 (609)
Q Consensus 220 ~~~~~~--~~~~~-------------~h~~~V~~l~~s----pd~-~~l~s~s~d-----~~i~iwd~~~~~-------- 266 (609)
++.+.. +.... .|.+.|++++|+ |++ .+|++++.| ..+++|++....
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 322 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYE 322 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHH
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchh
Confidence 876542 21111 245679999995 554 567777766 378899853110
Q ss_pred -------CCceEEEeccCCCCCccceEEEEE--------EcCCeEEEEEcCCcEEEEeCCCCCCC------ceeeeCCCC
Q 007283 267 -------HGKLKKTLTPSGSGGVDDMLVGCL--------WQNDFLVIVSLGGTISIFSANDLEKS------PLQLSGHMK 325 (609)
Q Consensus 267 -------~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~g~i~~~~~~~~~~~------~~~~~~h~~ 325 (609)
..+....+.......+....+... .++..+++++.++++++|++...... ...+.+|..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~ 402 (902)
T 2oaj_A 323 GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRP 402 (902)
T ss_dssp HHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTT
T ss_pred hhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCC
Confidence 011122222111111111111100 11236788889999999997543111 122455667
Q ss_pred CeEEEEEecCCCCEEEEEecCCcEEEEecCc---cccceeccccccceeEe--eeeCCcEEEEeccceEEEEeccCCccc
Q 007283 326 NVTALTVLNIDPKVILSSSYDGLIVKWIQGI---GYGGKLQRKENSQIKCF--AAIEEEIVTSGFDNKIWRVSLQGDQCG 400 (609)
Q Consensus 326 ~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~i~~~~~~~~~~~ 400 (609)
.|.++++.+. ..++|+... .........+...+..+ ...++.+++++.|+.|+.|++.....
T Consensus 403 ~v~~~~~s~~------------~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~- 469 (902)
T 2oaj_A 403 LATTSMAASV------------PNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDI- 469 (902)
T ss_dssp BEEEEEEEEE------------EHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTT-
T ss_pred CeeEEEEEEc------------CHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccc-
Confidence 7777766421 001232110 00000000011111111 22344566667777777776654321
Q ss_pred cccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCe
Q 007283 401 YANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDT 480 (609)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~ 480 (609)
.. ...+..... + .+ ...+...|.+++|+|||++||+|+.||+|++|++.++.
T Consensus 470 -~~-------~~~~~~~l~----------------~---~~-~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 470 -QD-------NASFEVNLS----------------R---TL-NKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp -TT-------TBCEEEEHH----------------H---HT-TCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECC
T ss_pred -cC-------CceEEeech----------------h---hc-CCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcc
Confidence 00 000000000 0 00 00233569999999999999999999999999997652
Q ss_pred e-------------------------------------------eeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEE
Q 007283 481 L-------------------------------------------TEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIV 517 (609)
Q Consensus 481 ~-------------------------------------------~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~i 517 (609)
. ....++.+|.+.|++|+||||| +||+|+.|++|++
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~l 600 (902)
T 2oaj_A 522 FYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLML 600 (902)
T ss_dssp C---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEE
T ss_pred ccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEE
Confidence 1 2245678899999999999999 9999999999999
Q ss_pred EEccCCceEEe----eec-CCCCceEEEEEC-----CCC---cEEEEEeCCCeEEEEEc---CCCCCcceeEeccc----
Q 007283 518 WDRVSREVKLK----NML-YHTARINCLAWS-----PNN---SMVATGSLDTCVIIYEI---DKPASSRMTIKGAH---- 577 (609)
Q Consensus 518 wd~~~~~~~~~----~~~-~h~~~i~~l~~s-----~d~---~~l~s~s~D~~v~vw~~---~~~~~~~~~~~~~h---- 577 (609)
||+.+.....+ .+. +|...|++++|| ||| ++|++|+.|++|++||+ ..+. ....+.+|
T Consensus 601 wd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~--~~~~~~~~~~~~ 678 (902)
T 2oaj_A 601 IDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK--FDVQLMDITNVT 678 (902)
T ss_dssp EETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC--EEEEEEEEEECC
T ss_pred EECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc--EEEEecCceecC
Confidence 99877654321 233 799999999999 886 89999999999999998 3322 23333445
Q ss_pred -cCCeEEEE-Ec----------------------CCCeEEEEeCCCcEEEEEccC
Q 007283 578 -LGGVYGLA-FT----------------------DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 578 -~~~v~~~~-~s----------------------~~~~l~s~s~D~~i~~W~~~~ 608 (609)
.+.|.+++ |+ .+..++.++ |..||+|++..
T Consensus 679 ~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~ 732 (902)
T 2oaj_A 679 SKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGK 732 (902)
T ss_dssp SSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTC
T ss_pred CCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCcc
Confidence 47788777 65 223355455 78999999853
No 8
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=7.9e-52 Score=481.81 Aligned_cols=539 Identities=20% Similarity=0.293 Sum_probs=414.6
Q ss_pred cccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEE
Q 007283 51 SIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAF 130 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~ 130 (609)
..+.+|.+.|++++|+|+|++||+|+.||+|+|||+.+++. ...+..|.+.|.+++|+|||++|++++.+. .+++|
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~---~v~vw 684 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-LLDIKAHEDEVLCCAFSSDDSYIATCSADK---KVKIW 684 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-EEEeccCCCCEEEEEEecCCCEEEEEeCCC---eEEEE
Confidence 34679999999999999999999999999999999988764 346788999999999999999999987543 57889
Q ss_pred EcCCCCeeEEEecCCccEEEEEEeeCC-CeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC
Q 007283 131 MWDSGTNVGEFDGHSRRVLSCAFKPSR-PFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD 209 (609)
Q Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 209 (609)
++.+++.+..+.+|...|.+++|+|++ ...+++|+.|+.+++||..+++....+.+|...|++++|+|+++.|++++.|
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 999999999999999999999999963 3468999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCccccccCcC----------CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCC
Q 007283 210 KKGIIYDGKTADKIGELSPE----------DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGS 279 (609)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~----------~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~ 279 (609)
+.+++||..+++....+... ..+...|.+++|+|+|+++++++ ++.+.+||+.. +...........
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~---~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHT---SGLLAEIHTGHH 840 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTT---CCEEEEEECSSS
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecC---CCceeEEcCCCC
Confidence 99999998877655433210 12334788999999999999987 78999999874 334444432222
Q ss_pred CCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCcccc
Q 007283 280 GGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYG 359 (609)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~ 359 (609)
..+. .+.+..++.++++++.++.+++|+.... .....+.+|...|.++++++ ++..+++++.||+|++|+......
T Consensus 841 ~~v~--~~~~sp~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 841 STIQ--YCDFSPYDHLAVIALSQYCVELWNIDSR-LKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp SCCC--EEEECSSTTEEEEECSSSCEEEEETTTT-EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CceE--EEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceeeecCCCccceEEEEECC-CCCEEEEEeCCCeEEEEEccccce
Confidence 2221 1222234668999999999999998753 33456789999999999975 557899999999999998643110
Q ss_pred ce-------------------------------------eccccccceeEeee--eCCcEEEEeccceEEEEeccCCccc
Q 007283 360 GK-------------------------------------LQRKENSQIKCFAA--IEEEIVTSGFDNKIWRVSLQGDQCG 400 (609)
Q Consensus 360 ~~-------------------------------------~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~ 400 (609)
.. ........+.++.. .+..+++++.++.+..|+.......
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~ 996 (1249)
T 3sfz_A 917 NSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF 996 (1249)
T ss_dssp CCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE
T ss_pred eeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee
Confidence 00 00001123444444 3556888899999999998765431
Q ss_pred cccccccCCCCceeEeeccCCcEEEEEecccEEEee--CCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 007283 401 YANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLR--GAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRG 478 (609)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~ 478 (609)
.....+......+.+..++..++..+.+..+.+|. .........+...+.+++++|++ .+++++.||.|++||+.+
T Consensus 997 -~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~ 1074 (1249)
T 3sfz_A 997 -SSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVKVWNVIT 1074 (1249)
T ss_dssp -EECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEEEEETTT
T ss_pred -eecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEEEEECCC
Confidence 11112233445555555544444444455566765 33444344466789999999966 478899999999999987
Q ss_pred CeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeE
Q 007283 479 DTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCV 558 (609)
Q Consensus 479 ~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v 558 (609)
+.. ...+.+|.+.|.+++|+|++.++++++.|+++++||+.+... ...+.+|...|++++||||+++|++|+.||+|
T Consensus 1075 ~~~--~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~-~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i 1151 (1249)
T 3sfz_A 1075 GRI--ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP-LHELKGHNGCVRCSAFSLDGILLATGDDNGEI 1151 (1249)
T ss_dssp TCC--CEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC-SBCCCCCSSCEEEEEECSSSSEEEEEETTSCC
T ss_pred Cce--eEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce-eeeeccCCCcEEEEEECCCCCEEEEEeCCCEE
Confidence 765 456789999999999999999999999999999999877654 34567899999999999999999999999999
Q ss_pred EEEEcCCCCCcce-------eEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEccC
Q 007283 559 IIYEIDKPASSRM-------TIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 559 ~vw~~~~~~~~~~-------~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~ 608 (609)
++||+..+..... ....+|.+.|++++|+ ++.+|++++ |.|++|++..
T Consensus 1152 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1152 RIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWNVAT 1207 (1249)
T ss_dssp CEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBCSSS
T ss_pred EEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEECCC
Confidence 9999976431110 1125799999999999 778888875 8999999853
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-52 Score=460.91 Aligned_cols=493 Identities=13% Similarity=0.118 Sum_probs=349.3
Q ss_pred cccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEc
Q 007283 53 YGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMW 132 (609)
Q Consensus 53 ~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 132 (609)
..+|.+.|++++|+|+|++||+|+.||+|+||+..+.+.. .. ..|...|.+++|+| |++|++++.+. .+++|++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~-~~-~~~~~~V~~l~fsp-g~~L~S~s~D~---~v~lWd~ 86 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV-IK-LEDRSAIKEMRFVK-GIYLVVINAKD---TVYVLSL 86 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE-EE-CSSCCCEEEEEEET-TTEEEEEETTC---EEEEEET
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE-EE-cCCCCCEEEEEEcC-CCEEEEEECcC---eEEEEEC
Confidence 3489999999999999999999999999999998765432 22 23677899999999 88888887644 5788888
Q ss_pred CCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee-----------eeccCcccceEEEEEcCC-C
Q 007283 133 DSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK-----------LSHRGHSNFVNCVRFSPD-G 200 (609)
Q Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~-----------~~~~~h~~~v~~l~~s~d-g 200 (609)
+.++.+..+. |...|.+++|+|++.. +++|+.|+.|++||.+..+.. ..+.+|...|.+++|+|+ +
T Consensus 87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~-l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 87 YSQKVLTTVF-VPGKITSIDTDASLDW-MLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp TTCSEEEEEE-CSSCEEEEECCTTCSE-EEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred CCCcEEEEEc-CCCCEEEEEECCCCCE-EEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 8888888886 6688999999999985 999999999999998877643 345789999999999996 4
Q ss_pred CEEEEEeCCCcEEEEeCCCCccccccCcC---------------CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccC
Q 007283 201 SKFISVSSDKKGIIYDGKTADKIGELSPE---------------DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISED 265 (609)
Q Consensus 201 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---------------~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~ 265 (609)
..|++|+.|+.+ +||.++++.+..+... .+|...|++++|+|+|++|++++.|++|++||++.
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~- 242 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANS- 242 (902)
T ss_dssp EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTT-
T ss_pred CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC-
Confidence 689999999999 9999988776554311 23567899999999999999999999999999874
Q ss_pred CCCceEEEeccC----CC-------C--CccceEEEEEEc----C---CeEEEEEcC-----CcEEEEeCCCC-------
Q 007283 266 NHGKLKKTLTPS----GS-------G--GVDDMLVGCLWQ----N---DFLVIVSLG-----GTISIFSANDL------- 313 (609)
Q Consensus 266 ~~~~~~~~~~~~----~~-------~--~~~~~~~~~~~~----~---~~~~~~~~~-----g~i~~~~~~~~------- 313 (609)
++.+...... .. + .....+..+.|. + .++++++.+ ..+.+|++...
T Consensus 243 --g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 243 --GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp --CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred --CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 3433321110 00 0 012234455562 2 245555554 26777763210
Q ss_pred ----------CCCceeee-CCCCCeEEEEEec---------CCCCEEEEEecCCcEEEEecCcccccee-------cccc
Q 007283 314 ----------EKSPLQLS-GHMKNVTALTVLN---------IDPKVILSSSYDGLIVKWIQGIGYGGKL-------QRKE 366 (609)
Q Consensus 314 ----------~~~~~~~~-~h~~~v~~~~~~~---------~~~~~~~t~s~dg~i~~W~~~~~~~~~~-------~~~~ 366 (609)
......+. +|...|..+.+.. .++..+++++.|++|++|+...+..... ...+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 00112222 4566777777643 1344788889999999998754321100 0001
Q ss_pred ccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe-c
Q 007283 367 NSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI-N 445 (609)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 445 (609)
...+.++.+.. ....+ |...... . ......+ .
T Consensus 401 ~~~v~~~~~s~-------~~~~~--w~~~~~~---------~-----------------------------~~~~~~l~G 433 (902)
T 2oaj_A 401 RPLATTSMAAS-------VPNKL--WLGALSA---------A-----------------------------QNKDYLLKG 433 (902)
T ss_dssp TTBEEEEEEEE-------EEHHH--HHHHHHT---------T-----------------------------BCCCCSCCC
T ss_pred CCCeeEEEEEE-------cCHHH--HHHHHhc---------c-----------------------------cCCCCcccC
Confidence 12222222110 00000 1000000 0 0000000 0
Q ss_pred cCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEE----e-----cCCCceEEEEECCCCCEEEEEeCCCeEE
Q 007283 446 LRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVL----E-----KHRGAVSVIRYSPDVSMFASGDVNREAI 516 (609)
Q Consensus 446 ~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~----~-----~h~~~i~~v~~s~~~~~l~s~s~d~~v~ 516 (609)
+...+..++++||++++|+|+.|++||+||+..+.+.....+ . +|...|.+|+|+|||++||+|+.|++|+
T Consensus 434 ~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~ 513 (902)
T 2oaj_A 434 GVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVV 513 (902)
T ss_dssp SBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEE
Confidence 122356678999999999999999999999987643211111 1 7999999999999999999999999999
Q ss_pred EEEccCCc--------------------------------------------eEEeeecCCCCceEEEEECCCCcEEEEE
Q 007283 517 VWDRVSRE--------------------------------------------VKLKNMLYHTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 517 iwd~~~~~--------------------------------------------~~~~~~~~h~~~i~~l~~s~d~~~l~s~ 552 (609)
+||+.+.+ ..+..+.+|.+.|++++||||| +||+|
T Consensus 514 lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsg 592 (902)
T 2oaj_A 514 LFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIA 592 (902)
T ss_dssp EEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEE
T ss_pred EEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEE
Confidence 99987552 1234466799999999999999 99999
Q ss_pred eCCCeEEEEEcCCCCCcce----eEe-ccccCCeEEEEEc-----CC----CeEEEEeCCCcEEEEEc
Q 007283 553 SLDTCVIIYEIDKPASSRM----TIK-GAHLGGVYGLAFT-----DE----HSVVSSGEDACVRVWRL 606 (609)
Q Consensus 553 s~D~~v~vw~~~~~~~~~~----~~~-~~h~~~v~~~~~s-----~~----~~l~s~s~D~~i~~W~~ 606 (609)
+.|++|++||+..+. ... ... .+|...|++++|+ ++ .+|++++.|++|++|++
T Consensus 593 s~D~tv~lwd~~~~~-~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 593 YAAGSLMLIDRRGPA-IIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp ETTSEEEEEETTTTE-EEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred eCCCcEEEEECCCCe-EEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 999999999986532 111 112 2899999999999 65 58999999999999998
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.1e-50 Score=432.12 Aligned_cols=510 Identities=16% Similarity=0.194 Sum_probs=399.1
Q ss_pred cCcCc-eeEEeecC--CCCeEEEeC-CCEEEEEeCCCC--------ccccccccCCCCcEEEEECCCCCEEEEEeCC---
Q 007283 14 TERGR-GILISGHP--KSNSILYTN-GRSVIILDLSNP--------LQVSIYGEHAYPATVARFSPNGEWIASADVS--- 78 (609)
Q Consensus 14 ~~~~~-~~~~~~~~--~~~~l~~~~-~~~~~i~~~~~~--------~~~~~~~~h~~~v~~~~~sp~g~~las~~~d--- 78 (609)
.|.+. ...+.++| +|+.|++.. ++.+.||++.++ .....+.+|...|.+++|+|+|++|++++.+
T Consensus 61 ~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 61 GHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 140 (615)
T ss_dssp TTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSC
T ss_pred cCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCC
Confidence 35666 78999999 999998874 589999999744 5566678899999999999999999999887
Q ss_pred -CcEEEEcCCCCceeeEEEeecccceeEEEECCCCC-EEEEEECCCCcceEEEEEcCCCCeeEEEecCCc---cEEEEEE
Q 007283 79 -GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGL-RIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSR---RVLSCAF 153 (609)
Q Consensus 79 -~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~ 153 (609)
+.|++||. ++ ....+..|...|.+++|+|+++ ++++++.+. .+++|+....+.+..+.+|.. .|.+++|
T Consensus 141 ~~~v~~~d~--~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 214 (615)
T 1pgu_A 141 FGVFISWDS--GN-SLGEVSGHSQRINACHLKQSRPMRSMTVGDDG---SVVFYQGPPFKFSASDRTHHKQGSFVRDVEF 214 (615)
T ss_dssp SEEEEETTT--CC-EEEECCSCSSCEEEEEECSSSSCEEEEEETTT---EEEEEETTTBEEEEEECSSSCTTCCEEEEEE
T ss_pred ccEEEEEEC--CC-cceeeecCCccEEEEEECCCCCcEEEEEeCCC---cEEEEeCCCcceeeeecccCCCCceEEEEEE
Confidence 68999983 33 3456778999999999999998 666666433 577888888888889999999 9999999
Q ss_pred eeC-CCeEEEEecCCCeEEEEeCCCCceeeec-c---CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCc
Q 007283 154 KPS-RPFRIATCGEDFLVNFYEGPPFKFKLSH-R---GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSP 228 (609)
Q Consensus 154 ~p~-~~~~i~t~~~d~~i~~~~~~~~~~~~~~-~---~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 228 (609)
+|+ +. .+++++.|+.+++||...++....+ . +|...|.+++|+ ++++|++++.|+.+++||..+++.+..+..
T Consensus 215 ~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 215 SPDSGE-FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp CSTTCC-EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCC-EEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 999 76 5999999999999999988888887 6 899999999999 999999999999999999998887766542
Q ss_pred C-CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEE
Q 007283 229 E-DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISI 307 (609)
Q Consensus 229 ~-~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 307 (609)
. ..+...+.++.|. ++.++++++.|+.|++||+.. ++....+... ...+..+.+ ++ +++++.+|.+++
T Consensus 293 ~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~---~~~~~~~~~~-----~~~v~~~~~-~~-l~~~~~dg~i~~ 361 (615)
T 1pgu_A 293 DKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGH---DEVLKTISGH-----NKGITALTV-NP-LISGSYDGRIME 361 (615)
T ss_dssp CTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTE---EEEEEEECCC-----SSCEEEEET-TT-TEEEETTSCEEE
T ss_pred CCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCC---CcEEEEEeCC-----CCCEEEEEe-cC-cEEECCCCeEEE
Confidence 2 2235778899985 899999999999999999863 3444444321 223455556 66 999999999999
Q ss_pred EeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeee-CCcEEEEecc
Q 007283 308 FSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI-EEEIVTSGFD 386 (609)
Q Consensus 308 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d 386 (609)
|+.. ... .+|...|.++++. .+..+++++.|+.+++|+....... ..+..+... ++.++..+.+
T Consensus 362 w~~~-----~~~-~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~~~~~~~~~~-------~~~~~~~~s~~~~~~~~~~~ 426 (615)
T 1pgu_A 362 WSSS-----SMH-QDHSNLIVSLDNS--KAQEYSSISWDDTLKVNGITKHEFG-------SQPKVASANNDGFTAVLTND 426 (615)
T ss_dssp TTTT-----EEE-CCCCSCEEEEECC--STTCCEEEETTTEEEETTEEEEECS-------SCEEEEEECSSSEEEEEETT
T ss_pred EEch-----hhc-CcccCceEEEEEC--CCcEEEEEeCCCCEEEEEcccCccc-------CCceEEEEcCCCCEEEEeCC
Confidence 9876 233 7899999999983 3468999999999999976543211 123444442 3345555588
Q ss_pred ceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEec--ccEEEeeCCeee---EEe-ccCCceeEEEEcCCCC
Q 007283 387 NKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTD--SGVVLLRGAEVV---STI-NLRFPVTASAIAPDGS 460 (609)
Q Consensus 387 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~-~~~~~~~~~~~sp~g~ 460 (609)
+.+..|+...... ...+........+.+. +..++.... ..+.+|+..... ..+ .+..++.+++++|+|+
T Consensus 427 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 501 (615)
T 1pgu_A 427 DDLLILQSFTGDI--IKSVRLNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET 501 (615)
T ss_dssp SEEEEEETTTCCE--EEEEECSSCEEEEEEC---SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS
T ss_pred CceEEEeccCCce--eeecccCCCceEEEEc---CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC
Confidence 8888888654432 1112223333333333 455555554 456666533221 112 2457899999999999
Q ss_pred EEEEEeCCCcEEEEEecCCeeeeeEEEec-CCCceEEEEECC----------CCCEEEEEeCCCeEEEEEccCCceEEee
Q 007283 461 EAIIGSQDGKLRVYSIRGDTLTEEAVLEK-HRGAVSVIRYSP----------DVSMFASGDVNREAIVWDRVSREVKLKN 529 (609)
Q Consensus 461 ~l~~gs~dg~i~iw~~~~~~~~~~~~~~~-h~~~i~~v~~s~----------~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 529 (609)
++++|+.||.|++|++..+... ..+.+ |...|++++|+| ++.+|++++.|++|++||+.+....+..
T Consensus 502 ~l~~~~~dg~i~iw~~~~~~~~--~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 579 (615)
T 1pgu_A 502 YIAAGDVMGKILLYDLQSREVK--TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA 579 (615)
T ss_dssp EEEEEETTSCEEEEETTTTEEE--ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEE
T ss_pred EEEEcCCCCeEEEeeCCCCcce--eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechh
Confidence 9999999999999999877653 44566 999999999999 9999999999999999999886445566
Q ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 530 MLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 530 ~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
+.+|...|++++|+||++ |++++.|++|++|+++.
T Consensus 580 ~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 580 LNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred hhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 788999999999999999 99999999999999864
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.5e-44 Score=399.55 Aligned_cols=474 Identities=18% Similarity=0.229 Sum_probs=350.7
Q ss_pred cCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 14 TERGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
.|.+....++++|+|..|+++. ++.+.|||+.++.....+.+|.+.|++++|+|+|++||+++.||+|+|||+.+++..
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4567788999999999998875 579999999999888889999999999999999999999999999999999887643
Q ss_pred eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC-CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEE
Q 007283 93 KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG-TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVN 171 (609)
Q Consensus 93 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~ 171 (609)
..+..|.+.|.+++|+||+.+|++++.+. .+++|+++.+ .....+.+|...|.+++|+|++...+++++.|+.+.
T Consensus 91 -~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 91 -VDFEAHPDYIRSIAVHPTKPYVLSGSDDL---TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp -EEEECCSSCEEEEEECSSSSEEEEEETTS---EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred -EEEecCCCCEEEEEEeCCCCEEEEEcCCC---EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 45778999999999999999999887543 5788888876 556788899999999999995445699999999999
Q ss_pred EEeCCCCceeeeccC-cccceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeE
Q 007283 172 FYEGPPFKFKLSHRG-HSNFVNCVRFSP--DGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQV 248 (609)
Q Consensus 172 ~~~~~~~~~~~~~~~-h~~~v~~l~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l 248 (609)
+|+....+....+.. |...+.+++|+| ++..|++++.|+.+.+||..+++.+..+ .+|.+.|.+++|+|++++|
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l 243 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL---EGHMSNVSFAVFHPTLPII 243 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEE---ECCSSCEEEEEECSSSSEE
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE---cCCCCCEEEEEEcCCCCEE
Confidence 999877766655554 448899999999 9999999999999999999988877665 3688999999999999999
Q ss_pred EEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeE
Q 007283 249 LTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVT 328 (609)
Q Consensus 249 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~ 328 (609)
++++.||.|++||+.. ++.... +..|...+.
T Consensus 244 ~~~~~dg~v~vwd~~~---~~~~~~----------------------------------------------~~~~~~~v~ 274 (814)
T 3mkq_A 244 ISGSEDGTLKIWNSST---YKVEKT----------------------------------------------LNVGLERSW 274 (814)
T ss_dssp EEEETTSCEEEEETTT---CSEEEE----------------------------------------------ECCSSSSEE
T ss_pred EEEeCCCeEEEEECCC---CcEEEE----------------------------------------------eecCCCcEE
Confidence 9999999999999863 222222 223555666
Q ss_pred EEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccce---EEEEeccCCcccccccc
Q 007283 329 ALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNK---IWRVSLQGDQCGYANSI 405 (609)
Q Consensus 329 ~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---i~~~~~~~~~~~~~~~~ 405 (609)
++++++....++++++.|+.+.+|+...... ...+...+..+.+++.+.. +.........
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------- 337 (814)
T 3mkq_A 275 CIATHPTGRKNYIASGFDNGFTVLSLGNDEP----------TLSLDPVGKLVWSGGKNAAASDIFTAVIRGNE------- 337 (814)
T ss_dssp EEEECTTCGGGEEEEEETTEEEEEECSCCSC----------CEEECSSSEEEEECCTTSCTTCEEEEECCSCC-------
T ss_pred EEEEccCCCceEEEEEeCCCEEEEEcCCCCc----------eeEECCCCCEEEECcccccceeeeeeeccccc-------
Confidence 7776654434434444566666665432210 0011111111111111110 0000000000
Q ss_pred ccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeE
Q 007283 406 DIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEA 485 (609)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~ 485 (609)
. ...... . .............+.+++++|+|+++++++ |+.+++|++.....
T Consensus 338 ~-----------~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~---- 389 (814)
T 3mkq_A 338 E-----------VEQDEP-----------L-SLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRN---- 389 (814)
T ss_dssp C-----------CCSSSC-----------B-CCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEE----
T ss_pred c-----------cccCcc-----------c-eeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccc----
Confidence 0 000000 0 000001112335678999999999999998 89999999754322
Q ss_pred EEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCC---cEEEEEeCCCeEEEEE
Q 007283 486 VLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNN---SMVATGSLDTCVIIYE 562 (609)
Q Consensus 486 ~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~---~~l~s~s~D~~v~vw~ 562 (609)
.+.+.|.+++|+|+++++++++.|+++++|+. +..|...+.+++|+||+ ++|++++.|++|++||
T Consensus 390 ---~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~---------~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d 457 (814)
T 3mkq_A 390 ---KAFGKCQDFVWGPDSNSYALIDETGQIKYYKN---------FKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFD 457 (814)
T ss_dssp ---EEEEECSEEEECTTSSCEEEECTTCCEEEEET---------TEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEEC
T ss_pred ---cCCCceEEEEEeCCCCeEEEEeCCCcEEEEEC---------CCCccceEEcCCcCccceecceEEEEecCCEEEEEE
Confidence 23567889999999999999999999999963 34578889999999998 6889999999999999
Q ss_pred cCCCCCcceeEeccccCCeEEEEEc-CCCeEEEE------eCCCcEEEEE
Q 007283 563 IDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSS------GEDACVRVWR 605 (609)
Q Consensus 563 ~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~------s~D~~i~~W~ 605 (609)
+..+. ......+|.. .++|+ ++++|+++ +.|+.+.+|-
T Consensus 458 ~~~~~--~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 458 WDNGT--LVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp TTTCC--EEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEEE
T ss_pred CCcCc--EEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEEe
Confidence 97643 3344455554 89999 77889988 6676666664
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.4e-43 Score=390.74 Aligned_cols=435 Identities=19% Similarity=0.272 Sum_probs=333.2
Q ss_pred cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 49 QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 49 ~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
..+.+.+|.+.|++++|||+|++||+++.||+|+|||+.+++. ...+..|..+|.+++|+|||++|++++++. .++
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~ 80 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDF---RIR 80 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTS---EEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-EEEEecCCCcEEEEEEeCCCCEEEEEeCCC---eEE
Confidence 3456889999999999999999999999999999999988764 346778999999999999999999988643 578
Q ss_pred EEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC-ceeeeccCcccceEEEEEcC-CCCEEEEE
Q 007283 129 AFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF-KFKLSHRGHSNFVNCVRFSP-DGSKFISV 206 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~l~~s~-dg~~l~s~ 206 (609)
+|+++.+..+..+.+|...|.+++|+|+++. +++++.|+.+++|+.... .....+.+|...|.+++|+| ++..|+++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCE-EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 8999999999999999999999999999985 889999999999998765 66677889999999999999 88899999
Q ss_pred eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECC--CCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccc
Q 007283 207 SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSP--DGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDD 284 (609)
Q Consensus 207 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~sp--d~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 284 (609)
+.|+.+++||..++.....+. ..|...|.+++|+| ++.+|++++.|+.|++||+.. ++..
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~------------- 221 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT---KSCV------------- 221 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEE--CCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT---TEEE-------------
T ss_pred eCCCeEEEEECCCCcceeEEe--cCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC---CcEE-------------
Confidence 999999999998877665553 24558899999999 999999999999999999852 1111
Q ss_pred eEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc
Q 007283 285 MLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR 364 (609)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~ 364 (609)
..+.+|...|.++++++ ++.++++++.||.|++|+...+.......
T Consensus 222 ---------------------------------~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 222 ---------------------------------ATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp ---------------------------------EEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred ---------------------------------EEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 12346788888998875 45699999999999999876543222221
Q ss_pred ccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCc-EEEEEecccEEEeeCCeeeEE
Q 007283 365 KENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPE-LVLVSTDSGVVLLRGAEVVST 443 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 443 (609)
.+...+.++.... .... +++.+.++++.++..
T Consensus 268 ~~~~~v~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~------ 300 (814)
T 3mkq_A 268 VGLERSWCIATHP-----------------------------------------TGRKNYIASGFDNGFTVLSL------ 300 (814)
T ss_dssp CSSSSEEEEEECT-----------------------------------------TCGGGEEEEEETTEEEEEEC------
T ss_pred cCCCcEEEEEEcc-----------------------------------------CCCceEEEEEeCCCEEEEEc------
Confidence 2222333333211 1111 123333333333321
Q ss_pred eccCCceeEEEEcCCCCEEEEEeCCCc---EEE------EEecCCee--eeeEEEecCCCceEEEEECCCCCEEEEEeCC
Q 007283 444 INLRFPVTASAIAPDGSEAIIGSQDGK---LRV------YSIRGDTL--TEEAVLEKHRGAVSVIRYSPDVSMFASGDVN 512 (609)
Q Consensus 444 ~~~~~~~~~~~~sp~g~~l~~gs~dg~---i~i------w~~~~~~~--~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d 512 (609)
......++++|+|..+++++.+.. +.. |++..+.. .....+..|...+.+++|+|+|+++++++ |
T Consensus 301 ---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~ 376 (814)
T 3mkq_A 301 ---GNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-D 376 (814)
T ss_dssp ---SCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-T
T ss_pred ---CCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-C
Confidence 112334567888888888876653 111 22221111 11234456777899999999999999998 8
Q ss_pred CeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEcCC---
Q 007283 513 REAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDE--- 589 (609)
Q Consensus 513 ~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~--- 589 (609)
+.+++|++..... .+.+.|++++|+||+++||+++.|++|++|+.- .+|...|.+++|+++
T Consensus 377 ~~~~i~~~~~~~~------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~----------~~~~~~v~~~~~s~dg~~ 440 (814)
T 3mkq_A 377 GEYVIYTALAWRN------KAFGKCQDFVWGPDSNSYALIDETGQIKYYKNF----------KEVTSWSVPMHSAIDRLF 440 (814)
T ss_dssp TEEEEEETTTTEE------EEEEECSEEEECTTSSCEEEECTTCCEEEEETT----------EECTTCCCCCSSCCCEEE
T ss_pred CEEEEEECccccc------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEECC----------CCccceEEcCCcCcccee
Confidence 9999999754322 245678899999999999999999999999631 358888999999954
Q ss_pred -CeEEEEeCCCcEEEEEcc
Q 007283 590 -HSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 590 -~~l~s~s~D~~i~~W~~~ 607 (609)
..|++++.|+.|++|++.
T Consensus 441 ~~~l~~~~~d~~v~~~d~~ 459 (814)
T 3mkq_A 441 SGALLGVKSDGFVYFFDWD 459 (814)
T ss_dssp CSSSEEEEETTEEEEECTT
T ss_pred cceEEEEecCCEEEEEECC
Confidence 489999999999999985
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-42 Score=354.15 Aligned_cols=309 Identities=21% Similarity=0.348 Sum_probs=250.7
Q ss_pred ccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 50 VSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
...+.+|+++|++++|+|++++||+|+.|++|+|||+.+++..
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~------------------------------------- 143 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE------------------------------------- 143 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------------------------------
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-------------------------------------
Confidence 3457799999999999999999999999999999998875421
Q ss_pred EEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC
Q 007283 130 FMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 209 (609)
..+.+|...|.+++|+|++. .+++|+.|+.|++||....+....+.+|...|.+++|+|++++|++|+.|
T Consensus 144 ---------~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 144 ---------RTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp ---------EEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ---------EEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 13456777788888888776 48899999999999999888888999999999999999999999999999
Q ss_pred CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 210 KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
++|++||..++..+..+ .+|...|.++.|+|++.+|++++.|++|++||+.. ++..
T Consensus 214 ~~i~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~---~~~~------------------ 269 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTF---TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT---KECK------------------ 269 (410)
T ss_dssp SEEEEEETTTCCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEE------------------
T ss_pred CeEEEEECCCCcEEEEE---eCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC---Ccee------------------
Confidence 99999999999887766 37999999999999999999999999999999862 1111
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQ 369 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~ 369 (609)
..+.+|...|.++++.+..... ... ..
T Consensus 270 ----------------------------~~~~~h~~~v~~~~~~~~~~~~---------------------~~~--~~-- 296 (410)
T 1vyh_C 270 ----------------------------AELREHRHVVECISWAPESSYS---------------------SIS--EA-- 296 (410)
T ss_dssp ----------------------------EEECCCSSCEEEEEECCSCGGG---------------------GGG--GC--
T ss_pred ----------------------------eEecCCCceEEEEEEcCccccc---------------------chh--hh--
Confidence 1234577778777775321100 000 00
Q ss_pred eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCc
Q 007283 370 IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFP 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (609)
. +
T Consensus 297 --------------------------------------~----------------------------~------------ 298 (410)
T 1vyh_C 297 --------------------------------------T----------------------------G------------ 298 (410)
T ss_dssp --------------------------------------C----------------------------S------------
T ss_pred --------------------------------------c----------------------------c------------
Confidence 0 0
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEee
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKN 529 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 529 (609)
.......++|.++++|+.|++|++||+..+.. ...+.+|.+.|.+++|+|++.++++|+.|++|++||+.+.+. +..
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~-~~~ 375 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC-MKT 375 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC-CEE
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-EEE
Confidence 00001123578999999999999999987764 456789999999999999999999999999999999876653 445
Q ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 530 MLYHTARINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 530 ~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
+.+|...|++++|+|++.+|++|+.|++|++|++
T Consensus 376 ~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 376 LNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 6789999999999999999999999999999985
No 14
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=334.17 Aligned_cols=291 Identities=21% Similarity=0.335 Sum_probs=244.0
Q ss_pred cccccCCCCcEEEEECCC----CCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcce
Q 007283 51 SIYGEHAYPATVARFSPN----GEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSL 126 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~----g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~ 126 (609)
..+.+|.+.|++++|+|+ +++||||+.|++||||++.+.+..
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~---------------------------------- 71 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD---------------------------------- 71 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE----------------------------------
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee----------------------------------
Confidence 346789999999999985 679999999999999998654311
Q ss_pred EEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEE
Q 007283 127 VRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISV 206 (609)
Q Consensus 127 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 206 (609)
....+.+|...|.+++|+|++. .+++++.|+.+++||..+++....+..|...+.+++|+|+|++|+++
T Consensus 72 ----------~~~~l~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g 140 (321)
T 3ow8_A 72 ----------LQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATG 140 (321)
T ss_dssp ----------EEEEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEE
T ss_pred ----------eeeeeccCCCCEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEE
Confidence 0123568888899999999887 49999999999999999998888888899999999999999999999
Q ss_pred eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceE
Q 007283 207 SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDML 286 (609)
Q Consensus 207 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (609)
+.|+.+++|+.++++....+. .|...|.+++|+|++++|++++.|+.|++||+.. ++...
T Consensus 141 ~~dg~v~i~~~~~~~~~~~~~---~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~---~~~~~-------------- 200 (321)
T 3ow8_A 141 THVGKVNIFGVESGKKEYSLD---TRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT---GKLLH-------------- 200 (321)
T ss_dssp CTTSEEEEEETTTCSEEEEEE---CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEE--------------
T ss_pred cCCCcEEEEEcCCCceeEEec---CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEE--------------
Confidence 999999999999888766553 5778899999999999999999999999999752 11100
Q ss_pred EEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccc
Q 007283 287 VGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKE 366 (609)
Q Consensus 287 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~ 366 (609)
.+.+|.
T Consensus 201 --------------------------------~~~~h~------------------------------------------ 206 (321)
T 3ow8_A 201 --------------------------------TLEGHA------------------------------------------ 206 (321)
T ss_dssp --------------------------------EECCCS------------------------------------------
T ss_pred --------------------------------EEcccC------------------------------------------
Confidence 011111
Q ss_pred ccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEecc
Q 007283 367 NSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINL 446 (609)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (609)
T Consensus 207 -------------------------------------------------------------------------------- 206 (321)
T 3ow8_A 207 -------------------------------------------------------------------------------- 206 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceE
Q 007283 447 RFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVK 526 (609)
Q Consensus 447 ~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~ 526 (609)
.++.+++++|+++++++|+.|++|++||++...+ ...+.+|.+.|.+++|+|++.+|++++.|++|++||+.+.+.
T Consensus 207 -~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~- 282 (321)
T 3ow8_A 207 -MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC- 282 (321)
T ss_dssp -SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-
T ss_pred -CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE-
Confidence 1356678899999999999999999999986654 456789999999999999999999999999999999877654
Q ss_pred EeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 527 LKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 527 ~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
+..+..|...|++++|+|++++|++++.|++|++||++
T Consensus 283 ~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 283 VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 44577899999999999999999999999999999974
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.3e-41 Score=342.00 Aligned_cols=289 Identities=23% Similarity=0.378 Sum_probs=246.7
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDG 217 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~ 217 (609)
...+.+|..+|++++|+|++. .+++|+.|+.|++||..+++....+.+|...|.+++|+|+|++|++|+.|++|++||.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSS-EEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 456889999999999999988 4999999999999999999988999999999999999999999999999999999999
Q ss_pred CCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEE
Q 007283 218 KTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLV 297 (609)
Q Consensus 218 ~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (609)
.+++.+..+ .+|...|.+++|+|++.+|++++.|++|++||+.. +...
T Consensus 180 ~~~~~~~~~---~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~---~~~~-------------------------- 227 (410)
T 1vyh_C 180 QGFECIRTM---HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT---GYCV-------------------------- 227 (410)
T ss_dssp TSSCEEECC---CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT---CCEE--------------------------
T ss_pred CCCceeEEE---cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcEE--------------------------
Confidence 988877766 47999999999999999999999999999999852 1110
Q ss_pred EEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeC
Q 007283 298 IVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE 377 (609)
Q Consensus 298 ~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (609)
..+.+|..
T Consensus 228 --------------------~~~~~h~~---------------------------------------------------- 235 (410)
T 1vyh_C 228 --------------------KTFTGHRE---------------------------------------------------- 235 (410)
T ss_dssp --------------------EEEECCSS----------------------------------------------------
T ss_pred --------------------EEEeCCCc----------------------------------------------------
Confidence 01112211
Q ss_pred CcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC
Q 007283 378 EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP 457 (609)
Q Consensus 378 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 457 (609)
.+.+++++|
T Consensus 236 -----------------------------------------------------------------------~v~~~~~~~ 244 (410)
T 1vyh_C 236 -----------------------------------------------------------------------WVRMVRPNQ 244 (410)
T ss_dssp -----------------------------------------------------------------------CEEEEEECT
T ss_pred -----------------------------------------------------------------------cEEEEEECC
Confidence 244556788
Q ss_pred CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC--------------------CCEEEEEeCCCeEEE
Q 007283 458 DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD--------------------VSMFASGDVNREAIV 517 (609)
Q Consensus 458 ~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~--------------------~~~l~s~s~d~~v~i 517 (609)
+|.++++|+.|++|++|++.++.. ...+.+|...|.+++|+|+ +.++++|+.|++|++
T Consensus 245 ~g~~l~s~s~D~~v~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 245 DGTLIASCSNDQTVRVWVVATKEC--KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCce--eeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 889999999999999999876654 3567889999999999997 678999999999999
Q ss_pred EEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEe
Q 007283 518 WDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSG 596 (609)
Q Consensus 518 wd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s 596 (609)
||+.++.. +..+.+|...|++++|+|++++|++|+.|++|++||+.... .+....+|...|++++|+ ++.+|+|+|
T Consensus 323 wd~~~~~~-~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 323 WDVSTGMC-LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--CMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp EETTTTEE-EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC--CCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EECCCCce-EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 99887654 44577899999999999999999999999999999997543 345567899999999999 678999999
Q ss_pred CCCcEEEEEcc
Q 007283 597 EDACVRVWRLT 607 (609)
Q Consensus 597 ~D~~i~~W~~~ 607 (609)
.|++|++|++.
T Consensus 400 ~D~~i~vW~~r 410 (410)
T 1vyh_C 400 VDQTVKVWECR 410 (410)
T ss_dssp TTSEEEEEC--
T ss_pred CCCcEEEEeCC
Confidence 99999999863
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-40 Score=329.22 Aligned_cols=290 Identities=18% Similarity=0.294 Sum_probs=247.2
Q ss_pred cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 49 QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 49 ~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
....+.+|.+.|++++|+|+|++||+|+.||+|+|||..+++.+ ..+..|...|.+++|+|+|++|++++.+. .++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~d~---~v~ 122 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSGNYVACGGLDN---ICS 122 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE-EEEECSSSCEEEEEECTTSSEEEEEETTC---EEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc-eEeecCCccEEEEEECCCCCEEEEEeCCC---eEE
Confidence 34568899999999999999999999999999999999887643 45778899999999999999999988644 577
Q ss_pred EEEcCCCC----eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEE
Q 007283 129 AFMWDSGT----NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFI 204 (609)
Q Consensus 129 ~~~~~~~~----~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 204 (609)
+|+..... ....+.+|...|.++.|+|++. +++++.|+.+++||..+++....+.+|...|.+++|+|++++|+
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 77776542 3556889999999999999874 88999999999999999999889999999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccc
Q 007283 205 SVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDD 284 (609)
Q Consensus 205 s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 284 (609)
+|+.|+.+++||.+++..+..+ .+|...|++++|+|++++|++++.|++|++||++. ++....+
T Consensus 201 sg~~d~~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~---------- 264 (340)
T 1got_B 201 SGACDASAKLWDVREGMCRQTF---TGHESDINAICFFPNGNAFATGSDDATCRLFDLRA---DQELMTY---------- 264 (340)
T ss_dssp EEETTSCEEEEETTTCSEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEEEEEE----------
T ss_pred EEeCCCcEEEEECCCCeeEEEE---cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC---CcEEEEE----------
Confidence 9999999999999998877666 37999999999999999999999999999999752 1000000
Q ss_pred eEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc
Q 007283 285 MLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR 364 (609)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~ 364 (609)
.|. .
T Consensus 265 -------------------------------------~~~----------~----------------------------- 268 (340)
T 1got_B 265 -------------------------------------SHD----------N----------------------------- 268 (340)
T ss_dssp -------------------------------------CCT----------T-----------------------------
T ss_pred -------------------------------------ccC----------C-----------------------------
Confidence 000 0
Q ss_pred ccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe
Q 007283 365 KENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI 444 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (609)
T Consensus 269 -------------------------------------------------------------------------------- 268 (340)
T 1got_B 269 -------------------------------------------------------------------------------- 268 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q 007283 445 NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWD 519 (609)
Q Consensus 445 ~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd 519 (609)
....+.+++++|+|+++++|+.|+.|++||+..... ...+.+|.+.|.+++|+|+|.+|++|+.|++|++||
T Consensus 269 -~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~--~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 -IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR--AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -cccceEEEEECCCCCEEEEECCCCeEEEEEcccCcE--eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 001256778999999999999999999999876654 456789999999999999999999999999999996
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=330.88 Aligned_cols=304 Identities=21% Similarity=0.326 Sum_probs=239.2
Q ss_pred ceeeeccCccc-ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcE
Q 007283 179 KFKLSHRGHSN-FVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSA 257 (609)
Q Consensus 179 ~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i 257 (609)
++...+.+|.. .|.+++|+|+|++||+|+.|++|+|||..++..........+|.+.|.+++|+|++++|++++.|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 44556778987 89999999999999999999999999987765432222235899999999999999999999999999
Q ss_pred EEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCC
Q 007283 258 KVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDP 337 (609)
Q Consensus 258 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 337 (609)
++|++... ... ....+.+|...|.+++|++ ++
T Consensus 86 ~iw~~~~~---~~~--------------------------------------------~~~~~~~h~~~v~~v~~sp-~~ 117 (345)
T 3fm0_A 86 CIWKKNQD---DFE--------------------------------------------CVTTLEGHENEVKSVAWAP-SG 117 (345)
T ss_dssp EEEEECCC----EE--------------------------------------------EEEEECCCSSCEEEEEECT-TS
T ss_pred EEEEccCC---CeE--------------------------------------------EEEEccCCCCCceEEEEeC-CC
Confidence 99997521 000 0123567999999999975 56
Q ss_pred CEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEee
Q 007283 338 KVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVA 417 (609)
Q Consensus 338 ~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (609)
+++++++.|++|++|+...... ..+
T Consensus 118 ~~l~s~s~D~~v~iwd~~~~~~----------~~~--------------------------------------------- 142 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDEEDE----------YEC--------------------------------------------- 142 (345)
T ss_dssp SEEEEEETTSCEEEEEECTTSC----------EEE---------------------------------------------
T ss_pred CEEEEEECCCeEEEEECCCCCC----------eEE---------------------------------------------
Confidence 7999999999999997643210 000
Q ss_pred ccCCcEEEEEecccEEEeeCCeeeEEe-ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEE
Q 007283 418 LHYPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSV 496 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~ 496 (609)
...+ .+...+.+++++|+++++++|+.|++|++|+...+.......+.+|.+.|.+
T Consensus 143 -----------------------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 143 -----------------------VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp -----------------------EEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred -----------------------EEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEE
Confidence 0000 1224588899999999999999999999999987765556678999999999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCc--------------eEEeeec-CCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q 007283 497 IRYSPDVSMFASGDVNREAIVWDRVSRE--------------VKLKNML-YHTARINCLAWSPNNSMVATGSLDTCVIIY 561 (609)
Q Consensus 497 v~~s~~~~~l~s~s~d~~v~iwd~~~~~--------------~~~~~~~-~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw 561 (609)
++|+|+|++|++|+.|++|++||..... ..+..+. .|...|++++|+|++.+|++++.|++|++|
T Consensus 200 l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw 279 (345)
T 3fm0_A 200 LAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVF 279 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 9999999999999999999999963211 0111222 388999999999999999999999999999
Q ss_pred EcCCCCCc---c----eeEeccccCCeEEEEEc-CC-CeEEEEeCCCcEEEEEccC
Q 007283 562 EIDKPASS---R----MTIKGAHLGGVYGLAFT-DE-HSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 562 ~~~~~~~~---~----~~~~~~h~~~v~~~~~s-~~-~~l~s~s~D~~i~~W~~~~ 608 (609)
+.+..... . .....+|...|++++|+ ++ .+|+|+|.|++|++|++..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 280 QEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp EECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 98643211 1 12345899999999999 44 4899999999999999864
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.5e-40 Score=325.42 Aligned_cols=293 Identities=19% Similarity=0.306 Sum_probs=239.5
Q ss_pred ceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEE
Q 007283 179 KFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAK 258 (609)
Q Consensus 179 ~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~ 258 (609)
+....+.+|...|++++|+|++++|++|+.|+++++||..+++.+..+. .|...|.+++|+|++++|++++.|+.++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP---LRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee---cCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 4456788999999999999999999999999999999999888776653 6888999999999999999999999999
Q ss_pred EeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCC
Q 007283 259 VWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPK 338 (609)
Q Consensus 259 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 338 (609)
+|++...... . .....+.+|...|.++.+.+. .
T Consensus 123 iw~~~~~~~~-~--------------------------------------------~~~~~~~~h~~~v~~~~~~~~--~ 155 (340)
T 1got_B 123 IYNLKTREGN-V--------------------------------------------RVSRELAGHTGYLSCCRFLDD--N 155 (340)
T ss_dssp EEETTTCSBS-C--------------------------------------------EEEEEEECCSSCEEEEEEEET--T
T ss_pred EEECccCCCc-c--------------------------------------------eeEEEecCCCccEEEEEECCC--C
Confidence 9998631100 0 001235678899999988754 4
Q ss_pred EEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeec
Q 007283 339 VILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVAL 418 (609)
Q Consensus 339 ~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (609)
.+++++.|++|++|+...+.. + .
T Consensus 156 ~l~s~s~d~~i~~wd~~~~~~----------~-------------------~---------------------------- 178 (340)
T 1got_B 156 QIVTSSGDTTCALWDIETGQQ----------T-------------------T---------------------------- 178 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEE----------E-------------------E----------------------------
T ss_pred cEEEEECCCcEEEEECCCCcE----------E-------------------E----------------------------
Confidence 699999999999997643210 0 0
Q ss_pred cCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEE
Q 007283 419 HYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIR 498 (609)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~ 498 (609)
....+..++.+++++|+++++++|+.|++|++||++.+.. ...+.+|...|.+++
T Consensus 179 -----------------------~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~--~~~~~~h~~~v~~v~ 233 (340)
T 1got_B 179 -----------------------TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC--RQTFTGHESDINAIC 233 (340)
T ss_dssp -----------------------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEE
T ss_pred -----------------------EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee--EEEEcCCcCCEEEEE
Confidence 0001224588899999999999999999999999987654 456789999999999
Q ss_pred ECCCCCEEEEEeCCCeEEEEEccCCceEEee-ecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccc
Q 007283 499 YSPDVSMFASGDVNREAIVWDRVSREVKLKN-MLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAH 577 (609)
Q Consensus 499 ~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h 577 (609)
|+|++.++++|+.|+++++||+...+..... ...+...|++++|+|++++|++|+.|+.|++||+... .....+.+|
T Consensus 234 ~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~--~~~~~~~~h 311 (340)
T 1got_B 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA--DRAGVLAGH 311 (340)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECC
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC--cEeeEeecC
Confidence 9999999999999999999998776543221 1123457999999999999999999999999998753 334556789
Q ss_pred cCCeEEEEEc-CCCeEEEEeCCCcEEEEE
Q 007283 578 LGGVYGLAFT-DEHSVVSSGEDACVRVWR 605 (609)
Q Consensus 578 ~~~v~~~~~s-~~~~l~s~s~D~~i~~W~ 605 (609)
.+.|++++|+ ++.+|+|+|.|++|++|+
T Consensus 312 ~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 312 DNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999 778999999999999996
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=326.61 Aligned_cols=289 Identities=18% Similarity=0.287 Sum_probs=242.1
Q ss_pred EEEecCCccEEEEEEeeCC---CeEEEEecCCCeEEEEeCCCCc--eeeeccCcccceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 139 GEFDGHSRRVLSCAFKPSR---PFRIATCGEDFLVNFYEGPPFK--FKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~---~~~i~t~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
..+.+|.+.|.+++|+|++ ...+++|+.|+++++|+....+ ....+.+|...|.+++|+|++..+++++.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 3456899999999999853 2369999999999999976554 3456889999999999999999999999999999
Q ss_pred EEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcC
Q 007283 214 IYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQN 293 (609)
Q Consensus 214 iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (609)
+||..+++.+..+. .|...+.+++|+|++++|++++.|+.+++|++... +...
T Consensus 106 lWd~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~---~~~~--------------------- 158 (321)
T 3ow8_A 106 LWDLENGKQIKSID---AGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEY--------------------- 158 (321)
T ss_dssp EEETTTTEEEEEEE---CCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC---SEEE---------------------
T ss_pred EEECCCCCEEEEEe---CCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC---ceeE---------------------
Confidence 99999988776663 57788999999999999999999999999997521 0000
Q ss_pred CeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEe
Q 007283 294 DFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCF 373 (609)
Q Consensus 294 ~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~ 373 (609)
.+..|
T Consensus 159 -------------------------~~~~~-------------------------------------------------- 163 (321)
T 3ow8_A 159 -------------------------SLDTR-------------------------------------------------- 163 (321)
T ss_dssp -------------------------EEECS--------------------------------------------------
T ss_pred -------------------------EecCC--------------------------------------------------
Confidence 00000
Q ss_pred eeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEE
Q 007283 374 AAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTAS 453 (609)
Q Consensus 374 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (609)
...+.++
T Consensus 164 -------------------------------------------------------------------------~~~v~~~ 170 (321)
T 3ow8_A 164 -------------------------------------------------------------------------GKFILSI 170 (321)
T ss_dssp -------------------------------------------------------------------------SSCEEEE
T ss_pred -------------------------------------------------------------------------CceEEEE
Confidence 0125667
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCC
Q 007283 454 AIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYH 533 (609)
Q Consensus 454 ~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h 533 (609)
+++|+|+++|+|+.||.|++||++++.. ...+.+|..+|.+++|+|++++|++|+.|++|++||+...+. ...+.+|
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~h 247 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL-AGTLSGH 247 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCE-EEEECCC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcce-eEEEcCC
Confidence 8899999999999999999999987765 456789999999999999999999999999999999877654 3457789
Q ss_pred CCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 534 TARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 534 ~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
...|++++|+|++++|++|+.|++|++||+... .......+|.+.|++++|+ ++++|+|+|.|++|++|++.
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR--TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC--EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999999764 3345556899999999999 77899999999999999974
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=328.45 Aligned_cols=316 Identities=22% Similarity=0.325 Sum_probs=237.9
Q ss_pred ccccccCCC-CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 50 VSIYGEHAY-PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 50 ~~~~~~h~~-~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
+..+.+|.+ .|.+++|+|+|++||+|+.|++|+|||..++......
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~--------------------------------- 54 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKS--------------------------------- 54 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEE---------------------------------
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeee---------------------------------
Confidence 345778987 8999999999999999999999999998765321100
Q ss_pred EEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC--ceeeeccCcccceEEEEEcCCCCEEEEE
Q 007283 129 AFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF--KFKLSHRGHSNFVNCVRFSPDGSKFISV 206 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 206 (609)
....+|...|.+++|+|++.+ |++|+.|+.+++|+.... +....+.+|...|.+++|+|+|++|++|
T Consensus 55 ----------~~~~~h~~~v~~~~~sp~g~~-l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~ 123 (345)
T 3fm0_A 55 ----------VLSEGHQRTVRKVAWSPCGNY-LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATC 123 (345)
T ss_dssp ----------EECSSCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ----------eeccccCCcEEEEEECCCCCE-EEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEE
Confidence 012467888888888888774 889999999999987654 4566788999999999999999999999
Q ss_pred eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceE
Q 007283 207 SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDML 286 (609)
Q Consensus 207 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (609)
+.|+++++||..++.....+....+|...|.+++|+|++++|++++.|++|++||.... ...
T Consensus 124 s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~---~~~--------------- 185 (345)
T 3fm0_A 124 SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED---DWV--------------- 185 (345)
T ss_dssp ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT---EEE---------------
T ss_pred ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC---CEE---------------
Confidence 99999999998876543323233579999999999999999999999999999997521 100
Q ss_pred EEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccc
Q 007283 287 VGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKE 366 (609)
Q Consensus 287 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~ 366 (609)
....+.+|...|.+++|++ +++++++++.|++|++|+..... .
T Consensus 186 -----------------------------~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~-------~ 228 (345)
T 3fm0_A 186 -----------------------------CCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPG-------N 228 (345)
T ss_dssp -----------------------------EEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTT-------C
T ss_pred -----------------------------EEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCC-------C
Confidence 0123457888999999875 45789999999999999532100 0
Q ss_pred ccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEecc
Q 007283 367 NSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINL 446 (609)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (609)
..
T Consensus 229 ~~------------------------------------------------------------------------------ 230 (345)
T 3fm0_A 229 EQ------------------------------------------------------------------------------ 230 (345)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEe-cCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q 007283 447 RFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLE-KHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREV 525 (609)
Q Consensus 447 ~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~-~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~ 525 (609)
.+.+ . ..+.. |. ....+. .|...|.+++|+|++..+++++.|+.+++|+......
T Consensus 231 --~~~~---~---------~~~~~---~~-------~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~ 286 (345)
T 3fm0_A 231 --GVAC---S---------GSDPS---WK-------CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSD 286 (345)
T ss_dssp --CCCC---C------------CE---EE-------EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSC
T ss_pred --ccee---e---------ccCCc---cc-------eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCC
Confidence 0000 0 00000 10 012233 3888999999999999999999999999999754321
Q ss_pred --------EEeeecCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEcCCC
Q 007283 526 --------KLKNMLYHTARINCLAWSPNN-SMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 526 --------~~~~~~~h~~~i~~l~~s~d~-~~l~s~s~D~~v~vw~~~~~ 566 (609)
......+|...|++++|+|++ .+||+|+.||+|++|++...
T Consensus 287 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 287 PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp TTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred cceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 112235799999999999998 59999999999999999754
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.9e-41 Score=333.50 Aligned_cols=306 Identities=16% Similarity=0.191 Sum_probs=222.0
Q ss_pred CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeC------CCcEEEEcCCCCceeeEEEeecccceeEEEEC
Q 007283 36 GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADV------SGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWS 109 (609)
Q Consensus 36 ~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~------d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~s 109 (609)
......|++.. .....|+..|++++|||||++||+|+. |++|++|+..++....
T Consensus 25 ~~~~~~w~~p~----~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~---------------- 84 (357)
T 4g56_B 25 SSKGSAWGRPV----TAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE---------------- 84 (357)
T ss_dssp -------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG----------------
T ss_pred CccccccCCCC----CCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce----------------
Confidence 36677887743 234579999999999999999999997 5567777655432100
Q ss_pred CCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee----eecc
Q 007283 110 PDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK----LSHR 185 (609)
Q Consensus 110 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~----~~~~ 185 (609)
.......+|...|.+++|+|++. +++++.|+.|++||..+++.. ....
T Consensus 85 --------------------------~~~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~ 136 (357)
T 4g56_B 85 --------------------------SLCTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNKFAKY 136 (357)
T ss_dssp --------------------------GGCSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCCEEEC
T ss_pred --------------------------eEecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEeeccC
Confidence 00112345777788888888764 556778888999987665433 2345
Q ss_pred CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeeccc
Q 007283 186 GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDISE 264 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~~~ 264 (609)
+|...|++++|+|+|++|++|+.|+.|++||..+++.+..+ .+|.+.|++++|+|++. ++++++.|++|++||++.
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~---~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY---NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE---cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC
Confidence 89999999999999999999999999999999999887766 37999999999999985 789999999999999752
Q ss_pred CCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe
Q 007283 265 DNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS 344 (609)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s 344 (609)
. +.... ..+..|
T Consensus 214 ~---~~~~~--------------------------------------------~~~~~~--------------------- 225 (357)
T 4g56_B 214 P---KPATR--------------------------------------------IDFCAS--------------------- 225 (357)
T ss_dssp S---SCBCB--------------------------------------------CCCTTC---------------------
T ss_pred C---ceeee--------------------------------------------eeeccc---------------------
Confidence 1 00000 000000
Q ss_pred cCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEE
Q 007283 345 YDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELV 424 (609)
Q Consensus 345 ~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (609)
T Consensus 226 -------------------------------------------------------------------------------- 225 (357)
T 4g56_B 226 -------------------------------------------------------------------------------- 225 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecccEEEeeCCeeeEEeccCCceeEEEEcCC-CCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCC
Q 007283 425 LVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD-GSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDV 503 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~ 503 (609)
...+.+++++|+ +.++|+|+.|+.|++||++.+.. ...+.+|...|++++|+|++
T Consensus 226 ----------------------~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~ 281 (357)
T 4g56_B 226 ----------------------DTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHS 281 (357)
T ss_dssp ----------------------CSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEEEECSSS
T ss_pred ----------------------cccccchhhhhcccceEEEeecccceeEEECCCCcE--eEEEeccceeEEEEEEcCCC
Confidence 012556778886 46788999999999999876654 45678999999999999997
Q ss_pred -CEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECC-CCcEEEEEeCCCeEEEEEcCCC
Q 007283 504 -SMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSP-NNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 504 -~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~-d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
.+||+|+.|++|++||+.+++.. ...+|...|++++||| |+++|+|++.|++|++|+++.+
T Consensus 282 ~~~lasgs~D~~i~iwd~~~~~~~--~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 282 SPFLASISEDCTVAVLDADFSEVF--RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SCCEEEEETTSCEEEECTTSCEEE--EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCEEEEEeCCCEEEEEECCCCcEe--EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 58999999999999998876543 3458999999999998 8999999999999999999754
No 22
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=329.25 Aligned_cols=308 Identities=19% Similarity=0.202 Sum_probs=229.0
Q ss_pred EEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEE
Q 007283 40 IILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACG 119 (609)
Q Consensus 40 ~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 119 (609)
..|++.... ...|...|.+++|+|||++|++++ |+++|+||... ..+..... .|.
T Consensus 17 r~w~~~~~~----~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~-----~~~~~~~~-------~~~-------- 71 (344)
T 4gqb_B 17 REWNLPPNA----PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSL-----WLFKDPCA-------APN-------- 71 (344)
T ss_dssp ------CCS----CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEE-----EEESSGGG-------TTC--------
T ss_pred cccCCCCCC----cccccCCEEEEEECCCCCEEEEEe-CCceEEeecee-----eeeccccc-------cCC--------
Confidence 456654322 234677799999999999999887 88999997421 00100000 000
Q ss_pred CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee----eccCcccceEEEE
Q 007283 120 DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL----SHRGHSNFVNCVR 195 (609)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~----~~~~h~~~v~~l~ 195 (609)
.........|...|.+++|+|++ .+++|+.|+.|++||..+++... ...+|...|++++
T Consensus 72 ---------------~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~ 134 (344)
T 4gqb_B 72 ---------------EGFCSAGVQTEAGVADLTWVGER--GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVS 134 (344)
T ss_dssp ---------------GGGCSEEEEESSCEEEEEEETTT--EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEE
T ss_pred ---------------cceeeeeeccCCCEEEEEEeCCC--eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEE
Confidence 00011122455679999999986 48899999999999987765433 3458999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeecccCCCCceEEEe
Q 007283 196 FSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 196 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 274 (609)
|+|+|++|++|+.|++|++||..+++.+..+ .+|.+.|++++|+|++. +|++++.|++|++||++. ++....+
T Consensus 135 ~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~---~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~ 208 (344)
T 4gqb_B 135 VLSSGTQAVSGSKDICIKVWDLAQQVVLSSY---RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQI 208 (344)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEEC
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEE---cCcCCceEEEEecCCCCCceeeeccccccccccccc---cceeeee
Confidence 9999999999999999999999999888776 48999999999999985 689999999999999862 1111000
Q ss_pred ccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEec
Q 007283 275 TPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~ 354 (609)
. ...|
T Consensus 209 ~--------------------------------------------~~~~------------------------------- 213 (344)
T 4gqb_B 209 G--------------------------------------------CSAP------------------------------- 213 (344)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred e--------------------------------------------ccee-------------------------------
Confidence 0 0000
Q ss_pred CccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEE
Q 007283 355 GIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVL 434 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (609)
T Consensus 214 -------------------------------------------------------------------------------- 213 (344)
T 4gqb_B 214 -------------------------------------------------------------------------------- 213 (344)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCeeeEEeccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCC-CEEEEEeCC
Q 007283 435 LRGAEVVSTINLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDV-SMFASGDVN 512 (609)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~-~~l~s~s~d 512 (609)
...+.+++++| +++++|+|+.||+|++||++++.. ...+.+|.+.|++++|+|++ .+||+|+.|
T Consensus 214 ------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 214 ------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp ------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred ------------eccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 01244566777 456788999999999999987654 45788999999999999998 589999999
Q ss_pred CeEEEEEccCCceEEeeecCCCCceEEEEECCCCc-EEEEEeCCCeEEEEEcCCC
Q 007283 513 REAIVWDRVSREVKLKNMLYHTARINCLAWSPNNS-MVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 513 ~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~-~l~s~s~D~~v~vw~~~~~ 566 (609)
++|++||+.+++. ..+.+|...|++++|||+++ +|+|++.|++|++|+++.+
T Consensus 280 ~~i~vwd~~~~~~--~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 280 CSLAVLDSSLSEL--FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp SCEEEECTTCCEE--EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CeEEEEECCCCcE--EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9999999877654 34678999999999999986 6789999999999999753
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=325.06 Aligned_cols=291 Identities=20% Similarity=0.350 Sum_probs=244.8
Q ss_pred cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 49 QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 49 ~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
....+.+|.+.|++++|+|+|++||||+.|++|+|||..+.+. ...+..+...|.+++|+|+|.+|++.+.+. .++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~-~~~~~~~~~~v~~~~~sp~g~~lasg~~d~---~i~ 131 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNK-EHAVTMPCTWVMACAYAPSGCAIACGGLDN---KCS 131 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-EEEEECSSSCCCEEEECTTSSEEEEESTTS---EEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCc-ceEEecCCCCEEEEEECCCCCEEEEeeCCC---CEE
Confidence 3456889999999999999999999999999999999987654 345677888999999999999999887543 466
Q ss_pred EEEcCCC------CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcC--CC
Q 007283 129 AFMWDSG------TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSP--DG 200 (609)
Q Consensus 129 ~~~~~~~------~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~--dg 200 (609)
+|.+... .....+.+|...|.+++|+|++.. +++++.|+.+++||.++++....+.+|...|.+++|+| +|
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 7776532 235577899999999999999874 99999999999999999999999999999999999988 47
Q ss_pred CEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCC
Q 007283 201 SKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSG 280 (609)
Q Consensus 201 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 280 (609)
+.|++|+.|+.+++||.++++.+..+ .+|...|++++|+|++.+|++++.|++|++||++.. +....
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~---~~~~~------- 277 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAF---ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD---REVAI------- 277 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEE-------
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC---cEEEE-------
Confidence 89999999999999999999877665 479999999999999999999999999999998521 00000
Q ss_pred CccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccc
Q 007283 281 GVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGG 360 (609)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~ 360 (609)
.....
T Consensus 278 ----------------------------------------------------~~~~~----------------------- 282 (354)
T 2pbi_B 278 ----------------------------------------------------YSKES----------------------- 282 (354)
T ss_dssp ----------------------------------------------------ECCTT-----------------------
T ss_pred ----------------------------------------------------EcCCC-----------------------
Confidence 00000
Q ss_pred eeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCee
Q 007283 361 KLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEV 440 (609)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (609)
T Consensus 283 -------------------------------------------------------------------------------- 282 (354)
T 2pbi_B 283 -------------------------------------------------------------------------------- 282 (354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q 007283 441 VSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWD 519 (609)
Q Consensus 441 ~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd 519 (609)
....+.+++++|+|+++++|+.|++|++||+..+.. ...+.+|.+.|.+++|+|||.+|++|+.|++|++|+
T Consensus 283 -----~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 283 -----IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR--VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -----CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE--EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -----cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce--EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 001256678899999999999999999999976654 356789999999999999999999999999999995
No 24
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-39 Score=317.70 Aligned_cols=292 Identities=21% Similarity=0.284 Sum_probs=242.0
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDG 217 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~ 217 (609)
..++.+|.+.|.+++|+|+++. +++++.|+.+++||.++.+....+.+|..+|.+++|+|++++|++|+.|++|++||.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~-l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPW-VLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 4568899999999999999985 999999999999999999888889999999999999999999999999999999999
Q ss_pred CCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEE
Q 007283 218 KTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLV 297 (609)
Q Consensus 218 ~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (609)
.+++.+..+ .+|.+.|.+++|+|++++|++++.|++|++||+... ...
T Consensus 85 ~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~--~~~--------------------------- 132 (304)
T 2ynn_A 85 NTGEKVVDF---EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN--WAL--------------------------- 132 (304)
T ss_dssp TTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT--TEE---------------------------
T ss_pred CCCcEEEEE---eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC--cch---------------------------
Confidence 999887766 379999999999999999999999999999998631 000
Q ss_pred EEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeC
Q 007283 298 IVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE 377 (609)
Q Consensus 298 ~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (609)
...+.+|...|.+++|++.++..+++|+.|++|++|+.........
T Consensus 133 -------------------~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~--------------- 178 (304)
T 2ynn_A 133 -------------------EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT--------------- 178 (304)
T ss_dssp -------------------EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE---------------
T ss_pred -------------------hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce---------------
Confidence 0234578899999999876678999999999999998643210000
Q ss_pred CcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC
Q 007283 378 EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP 457 (609)
Q Consensus 378 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 457 (609)
+ ...+...+..++++|
T Consensus 179 ---~-------------------------------------------------------------~~~~~~~v~~~~~~~ 194 (304)
T 2ynn_A 179 ---L-------------------------------------------------------------TTGQERGVNYVDYYP 194 (304)
T ss_dssp ---E-------------------------------------------------------------ECCCTTCEEEEEECC
T ss_pred ---e-------------------------------------------------------------ccCCcCcEEEEEEEE
Confidence 0 000012345556655
Q ss_pred --CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCC
Q 007283 458 --DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTA 535 (609)
Q Consensus 458 --~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~ 535 (609)
++.++++|+.|++|++||++.+.+ ...+.+|...|.+++|+|++.+|++|+.|++|++||..+.+. .+.+..|..
T Consensus 195 ~~~~~~l~s~s~D~~i~iWd~~~~~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~-~~~~~~~~~ 271 (304)
T 2ynn_A 195 LPDKPYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKV-EKTLNVGLE 271 (304)
T ss_dssp STTCCEEEEEETTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-EEEECCSSS
T ss_pred cCCCCEEEEEcCCCeEEEEeCCCCcc--ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCce-eeeccCCCc
Confidence 788999999999999999987764 467889999999999999999999999999999999877654 445678999
Q ss_pred ceEEEEECCCCc--EEEEEeCCCeEEEEEcC
Q 007283 536 RINCLAWSPNNS--MVATGSLDTCVIIYEID 564 (609)
Q Consensus 536 ~i~~l~~s~d~~--~l~s~s~D~~v~vw~~~ 564 (609)
.+++++|+|+++ ++|+|+.|| +.+|++.
T Consensus 272 ~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 272 RSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp SEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred cEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 999999999885 578877666 6777764
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-40 Score=334.37 Aligned_cols=314 Identities=16% Similarity=0.254 Sum_probs=244.9
Q ss_pred EEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 172 FYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 172 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
.|+.....+...+.+|...|++++|+|++++|++|+.|++++|||..+++....+. +|...|.+++|+|++++|+++
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~---~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK---LHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE---CCCTTCCCCEECTTSSEEEEC
T ss_pred ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe---cCCCCEEEEEECCCCCEEEEe
Confidence 34555566677889999999999999999999999999999999999988776663 688999999999999999999
Q ss_pred eCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEE
Q 007283 252 SADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALT 331 (609)
Q Consensus 252 s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~ 331 (609)
+.|+.+++|++...... . ........+.+|...|.++.
T Consensus 127 ~~d~~v~iw~~~~~~~~--------~----------------------------------~~~~~~~~~~gh~~~v~~~~ 164 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADR--------D----------------------------------GNMPVSRVLTGHKGYASSCQ 164 (380)
T ss_dssp CSSSCCEEEECCCCSSC--------C----------------------------------CSSTTCCBCCCCSSCCCCCB
T ss_pred eCCCcEEEEECCCCccc--------c----------------------------------CCccceeeccCCCcceEEEE
Confidence 99999999998631100 0 00111234678999998888
Q ss_pred EecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCC
Q 007283 332 VLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQP 411 (609)
Q Consensus 332 ~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~ 411 (609)
+.+..+..+++|+.|++|++|+...+.... .+....
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~-----------------------------~~~~~~--------------- 200 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRIS-----------------------------IFGSEF--------------- 200 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEE-----------------------------EECCCS---------------
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEE-----------------------------Eeeccc---------------
Confidence 876666789999999999999875431100 000000
Q ss_pred ceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecC
Q 007283 412 KDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKH 490 (609)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h 490 (609)
...+...+.+++++| ++.++++|+.|++|++||++... .....+.+|
T Consensus 201 -------------------------------~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h 248 (380)
T 3iz6_a 201 -------------------------------PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGH 248 (380)
T ss_dssp -------------------------------SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCC
T ss_pred -------------------------------CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCc
Confidence 001123467778866 88999999999999999986332 124567899
Q ss_pred CCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCC-------CCceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 491 RGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYH-------TARINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 491 ~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h-------~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
.+.|.+++|+|++.+|++|+.|+++++||+.++.... .+..+ ...|++++|+|+|++|++|+.||.|++||+
T Consensus 249 ~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 249 EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ-VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE-EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE-EecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 9999999999999999999999999999998765432 22222 235899999999999999999999999998
Q ss_pred CCCCCccee---EeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEccC
Q 007283 564 DKPASSRMT---IKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 564 ~~~~~~~~~---~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~ 608 (609)
.... .... ...+|.+.|++++|+ ++.+|+|+|.|++|++|++..
T Consensus 328 ~~~~-~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 328 LLAE-MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp TTCC-EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCc-eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 6533 1111 125899999999999 788999999999999999863
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.3e-39 Score=317.20 Aligned_cols=295 Identities=22% Similarity=0.337 Sum_probs=235.8
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC-----CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcE
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP-----FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~-----~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i 212 (609)
...+.+|.+.|.+++|+|+++..+++|+.|+++++|+... ......+.+|...|.+++|+|+|++|++|+.|++|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 3568899999999999998766799999999999998642 23355688999999999999999999999999999
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
++||..+++.+..+ .+|.+.|.+++|+|++.+|++++.|++|++||++. +..
T Consensus 90 ~~wd~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~--------------------- 141 (319)
T 3frx_A 90 RLWDVATGETYQRF---VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCL--------------------- 141 (319)
T ss_dssp EEEETTTTEEEEEE---ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----CEE---------------------
T ss_pred EEEECCCCCeeEEE---ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeE---------------------
Confidence 99999999877666 37999999999999999999999999999999751 111
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
..+.+|...|.++.+.+..
T Consensus 142 -------------------------~~~~~h~~~v~~~~~~~~~------------------------------------ 160 (319)
T 3frx_A 142 -------------------------ATLLGHNDWVSQVRVVPNE------------------------------------ 160 (319)
T ss_dssp -------------------------EEECCCSSCEEEEEECCC-------------------------------------
T ss_pred -------------------------EEEeccCCcEEEEEEccCC------------------------------------
Confidence 1223465555555443210
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeE
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTA 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (609)
T Consensus 161 -------------------------------------------------------------------------------- 160 (319)
T 3frx_A 161 -------------------------------------------------------------------------------- 160 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecC
Q 007283 453 SAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY 532 (609)
Q Consensus 453 ~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 532 (609)
...+++..+++|+.|+.|++||++.... ...+.+|...|.+++|+|++++|++|+.|++|++||+.+.+... .+.
T Consensus 161 -~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~-~~~- 235 (319)
T 3frx_A 161 -KADDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY-TLS- 235 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE-EEE-
T ss_pred -CCCCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-Eec-
Confidence 0123456789999999999999976654 35678999999999999999999999999999999988765432 333
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCccee-------EeccccCCeEEEEEc-CCCeEEEEeCCCcEEEE
Q 007283 533 HTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMT-------IKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVW 604 (609)
Q Consensus 533 h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~-------~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W 604 (609)
+...|.+++|+|++++|++++.+ .+++|+++... .... ...+|...|.+++|+ |+++|++++.|+.|++|
T Consensus 236 ~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 236 AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQY-LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEE-EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCe-eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
Confidence 45789999999999999988765 59999987532 1111 123467789999999 78999999999999999
Q ss_pred EccC
Q 007283 605 RLTP 608 (609)
Q Consensus 605 ~~~~ 608 (609)
++.+
T Consensus 314 d~~t 317 (319)
T 3frx_A 314 QVMT 317 (319)
T ss_dssp EEEE
T ss_pred EEee
Confidence 9864
No 27
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.3e-39 Score=320.39 Aligned_cols=295 Identities=20% Similarity=0.286 Sum_probs=239.6
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEe
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYD 216 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd 216 (609)
....+.+|...|.+++|+|++. +|++|+.|+.+++||..+.+....+..|...|.+++|+|+|..|++++.|+.+.+|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKR-RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCC-EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 4567899999999999999987 599999999999999988888888888999999999999999999999999999998
Q ss_pred CCCCccc---cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcC
Q 007283 217 GKTADKI---GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQN 293 (609)
Q Consensus 217 ~~~~~~~---~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (609)
....... .......+|.+.|.+++|+|++..|++++.|++|++||+.. ++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~---~~~~---------------------- 189 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES---GQLL---------------------- 189 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT---CCEE----------------------
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC---CeEE----------------------
Confidence 7643211 11111236999999999999999999999999999999862 2211
Q ss_pred CeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecC-CCCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 294 DFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNI-DPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 294 ~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
..+.+|...|.++++.+. ++.++++|+.||+|++|+...+.. +
T Consensus 190 ------------------------~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~----------~-- 233 (354)
T 2pbi_B 190 ------------------------QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC----------V-- 233 (354)
T ss_dssp ------------------------EEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE----------E--
T ss_pred ------------------------EEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE----------E--
Confidence 234568888888888753 457999999999999998643210 0
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeE
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTA 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (609)
.. ...+..++.+
T Consensus 234 -----------------~~---------------------------------------------------~~~h~~~v~~ 245 (354)
T 2pbi_B 234 -----------------QA---------------------------------------------------FETHESDVNS 245 (354)
T ss_dssp -----------------EE---------------------------------------------------ECCCSSCEEE
T ss_pred -----------------EE---------------------------------------------------ecCCCCCeEE
Confidence 00 0012245889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecC
Q 007283 453 SAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY 532 (609)
Q Consensus 453 ~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 532 (609)
++++|++.++|+|+.|++|++||++.+..........+...+.+++|+|++.++++|+.|++|++||+.+++. +..+.+
T Consensus 246 v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~-~~~l~~ 324 (354)
T 2pbi_B 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSR-VSILFG 324 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE-EEEECC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCce-EEEEEC
Confidence 9999999999999999999999998765432111123345789999999999999999999999999877654 445778
Q ss_pred CCCceEEEEECCCCcEEEEEeCCCeEEEEE
Q 007283 533 HTARINCLAWSPNNSMVATGSLDTCVIIYE 562 (609)
Q Consensus 533 h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~ 562 (609)
|...|++++|+||+++|++|+.|++|++|+
T Consensus 325 h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 325 HENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999999995
No 28
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-39 Score=329.14 Aligned_cols=343 Identities=17% Similarity=0.191 Sum_probs=267.8
Q ss_pred EEEEEeCCCCccccccccCCCCcEEEEECCCCC-EEEEEeCCCcEEEEcC----CCCce-----eeEEEee---------
Q 007283 38 SVIILDLSNPLQVSIYGEHAYPATVARFSPNGE-WIASADVSGTVRIWGA----HNDHV-----LKKEFRV--------- 98 (609)
Q Consensus 38 ~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~las~~~d~~i~vWd~----~~~~~-----~~~~~~~--------- 98 (609)
.+.+|++...........|.+.|++++|+|+|+ +||+++.|++|+||++ .+++. ....+..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 345677766555444455679999999999999 9999999999999999 76652 2223333
Q ss_pred -cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC
Q 007283 99 -LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP 177 (609)
Q Consensus 99 -~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~ 177 (609)
|...|.+++|+||+++|++++.+. .+++|+ ..+..+..+.+|...|.+++|+|++.. +++++.|+.+++|+...
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENG---ELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTH-IISMDVENVTILWNVIS 180 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTS---CEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSE-EEEEETTCCEEEEETTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCC---eEEEEe-CCCCeeeeccCCCccEEEEEECCCCCE-EEEEecCCeEEEEECCC
Confidence 566999999999999999887543 366666 456778889999999999999999885 88999999999999998
Q ss_pred CceeeeccCcccc---------------eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEEC
Q 007283 178 FKFKLSHRGHSNF---------------VNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWS 242 (609)
Q Consensus 178 ~~~~~~~~~h~~~---------------v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~s 242 (609)
++....+..|... +.++.|+|++ .+++++.|+.+++||..+++.+..+ .+|...|.+++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~---~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 181 GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKL---IGHHGPISVLEFN 256 (425)
T ss_dssp TEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEE---CCCSSCEEEEEEE
T ss_pred CcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeee---ccCCCceEEEEEC
Confidence 8888887777766 9999999986 5889999999999999988776655 3688999999999
Q ss_pred CCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeC
Q 007283 243 PDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSG 322 (609)
Q Consensus 243 pd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 322 (609)
|++++|++++.|+.|++||+... +.. ..+.+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~---~~~----------------------------------------------~~~~~ 287 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNG---NSQ----------------------------------------------NCFYG 287 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSB---SCS----------------------------------------------EEECC
T ss_pred CCCCEEEEEcCCCEEEEEECCCC---ccc----------------------------------------------eEecC
Confidence 99999999999999999997521 000 00111
Q ss_pred CCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccc
Q 007283 323 HMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYA 402 (609)
Q Consensus 323 h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 402 (609)
|.
T Consensus 288 ~~------------------------------------------------------------------------------ 289 (425)
T 1r5m_A 288 HS------------------------------------------------------------------------------ 289 (425)
T ss_dssp CS------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred cccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeee
Q 007283 403 NSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLT 482 (609)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~ 482 (609)
.++.+++++|++ .+++++.|+.|++|++..+..
T Consensus 290 ---------------------------------------------~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~- 322 (425)
T 1r5m_A 290 ---------------------------------------------QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL- 322 (425)
T ss_dssp ---------------------------------------------SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE-
T ss_pred ---------------------------------------------ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE-
Confidence 124556777888 888888999999999876654
Q ss_pred eeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCc-------------------eEEeeecCCCC--ceEEEE
Q 007283 483 EEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSRE-------------------VKLKNMLYHTA--RINCLA 541 (609)
Q Consensus 483 ~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~-------------------~~~~~~~~h~~--~i~~l~ 541 (609)
...+..|...|.+++|+|++.++++++.|+.+++||+.+.+ ..+..+..|.. .|++++
T Consensus 323 -~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 401 (425)
T 1r5m_A 323 -LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS 401 (425)
T ss_dssp -EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEE
T ss_pred -eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEE
Confidence 35567899999999999999999999999999999987655 03445677866 999999
Q ss_pred ECCCCcEEEEEeCCCeEEEEEcC
Q 007283 542 WSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 542 ~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
|+|++++|++++.||.|++|+++
T Consensus 402 ~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 402 WNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECTTSSEEEEEESSSCCEEEECC
T ss_pred ccCCCceEEEEecCceEEEEeec
Confidence 99999999999999999999975
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-39 Score=318.68 Aligned_cols=307 Identities=21% Similarity=0.281 Sum_probs=217.9
Q ss_pred ccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceE
Q 007283 48 LQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLV 127 (609)
Q Consensus 48 ~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~ 127 (609)
+.+..+.+|++.|.+++|+|+ +||+|+.|++|+|||+.++....
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~---------------------------------- 48 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTL---------------------------------- 48 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEE----------------------------------
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEE----------------------------------
Confidence 344568899999999999998 99999999999999987642100
Q ss_pred EEEEcCCCCeeEEE-e-cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC-------CceeeeccCcccceEEEEEcC
Q 007283 128 RAFMWDSGTNVGEF-D-GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP-------FKFKLSHRGHSNFVNCVRFSP 198 (609)
Q Consensus 128 ~~~~~~~~~~~~~~-~-~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~-------~~~~~~~~~h~~~v~~l~~s~ 198 (609)
...+ . +|...|.+++|+|++. .+++|+.|+.+++|+... .+....+.+|...|.+++|+|
T Consensus 49 ----------~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp 117 (330)
T 2hes_X 49 ----------IDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN 117 (330)
T ss_dssp ----------EEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT
T ss_pred ----------EEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC
Confidence 0011 1 3777888888888876 488899999999998642 345566889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCC-ccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccC
Q 007283 199 DGSKFISVSSDKKGIIYDGKTA-DKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPS 277 (609)
Q Consensus 199 dg~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~ 277 (609)
+|++|++|+.|++|++||.... .....+....+|...|.+++|+|++.+|++++.|++|++||.... ..
T Consensus 118 ~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~---~~------- 187 (330)
T 2hes_X 118 DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD---DW------- 187 (330)
T ss_dssp TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT---EE-------
T ss_pred CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC---Ce-------
Confidence 9999999999999999998432 211112223479999999999999999999999999999996421 00
Q ss_pred CCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCC-CCEEEEEecCCcEEEEecCc
Q 007283 278 GSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNID-PKVILSSSYDGLIVKWIQGI 356 (609)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~t~s~dg~i~~W~~~~ 356 (609)
.....+.+|...|.+++|++.. ...+++++.|++|++|+...
T Consensus 188 -------------------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 188 -------------------------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp -------------------------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred -------------------------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 0012345677778777776432 34677777777777774321
Q ss_pred cccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEee
Q 007283 357 GYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLR 436 (609)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (609)
..
T Consensus 231 ~~------------------------------------------------------------------------------ 232 (330)
T 2hes_X 231 DD------------------------------------------------------------------------------ 232 (330)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred CCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEe-cCCCceEEEEECCCCCEEEEEeCCCeE
Q 007283 437 GAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLE-KHRGAVSVIRYSPDVSMFASGDVNREA 515 (609)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~-~h~~~i~~v~~s~~~~~l~s~s~d~~v 515 (609)
+.+. ..| .....+. .|...|.+++|++++ ++++++.|++|
T Consensus 233 --------------------~~~~-----------~~~-------~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v 273 (330)
T 2hes_X 233 --------------------EDDQ-----------QEW-------VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVL 273 (330)
T ss_dssp --------------------TTSC-----------EEE-------EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCE
T ss_pred --------------------cccc-----------cee-------EEeeecccccccceEEEEEcCCC-EEEEEeCCCEE
Confidence 0000 000 0112233 388999999999765 89999999999
Q ss_pred EEEEccCCce--EEeeecCCCC-ceEEEEECC--CCcEEEEEeCCCeEEEEEcCC
Q 007283 516 IVWDRVSREV--KLKNMLYHTA-RINCLAWSP--NNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 516 ~iwd~~~~~~--~~~~~~~h~~-~i~~l~~s~--d~~~l~s~s~D~~v~vw~~~~ 565 (609)
++||..+++. .......|.. .|++++|+| ++++||+|+.||+|++|++..
T Consensus 274 ~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 274 AVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9999876642 2223356877 899999999 789999999999999999753
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=313.97 Aligned_cols=297 Identities=21% Similarity=0.273 Sum_probs=224.9
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC--ceeeec-cC-cccceEEEEEcCCCCEEEEEeCCCcE
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF--KFKLSH-RG-HSNFVNCVRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~--~~~~~~-~~-h~~~v~~l~~s~dg~~l~s~~~d~~i 212 (609)
.+..+.+|...|.+++|+|+ ++++|+.|+.+++|+.... +....+ .+ |...|.+++|+|++++|++|+.|++|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 45678899999999999987 6999999999999998764 334444 34 99999999999999999999999999
Q ss_pred EEEeCCCC-------ccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccce
Q 007283 213 IIYDGKTA-------DKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDM 285 (609)
Q Consensus 213 ~iwd~~~~-------~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 285 (609)
+|||.... +.+.. ..+|.+.|.+++|+|++++|++++.|++|++||+... +....
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~--~~~~~------------- 144 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES--GEEYE------------- 144 (330)
T ss_dssp EEEEC-------CCCEEEEE---EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT--CCCCE-------------
T ss_pred EEEEcccCcCccccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC--CCCeE-------------
Confidence 99998532 22222 2489999999999999999999999999999997421 00000
Q ss_pred EEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccc
Q 007283 286 LVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRK 365 (609)
Q Consensus 286 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~ 365 (609)
....+.+|.
T Consensus 145 ------------------------------~~~~~~~h~----------------------------------------- 153 (330)
T 2hes_X 145 ------------------------------CISVLQEHS----------------------------------------- 153 (330)
T ss_dssp ------------------------------EEEEECCCS-----------------------------------------
T ss_pred ------------------------------EEEEeccCC-----------------------------------------
Confidence 000011111
Q ss_pred cccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEec
Q 007283 366 ENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTIN 445 (609)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (609)
T Consensus 154 -------------------------------------------------------------------------------- 153 (330)
T 2hes_X 154 -------------------------------------------------------------------------------- 153 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEccCC
Q 007283 446 LRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD--VSMFASGDVNREAIVWDRVSR 523 (609)
Q Consensus 446 ~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~--~~~l~s~s~d~~v~iwd~~~~ 523 (609)
..+.+++++|++.+|++|+.|++|++|+...+.......+.+|.+.|.+++|+|+ +.++++|+.|++|++||+...
T Consensus 154 --~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 154 --QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp --SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred --CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 2366778889999999999999999999876644445678899999999999999 779999999999999997643
Q ss_pred c-------eEEeeec-CCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCC-cceeEeccccC-CeEEEEEcC---CC
Q 007283 524 E-------VKLKNML-YHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPAS-SRMTIKGAHLG-GVYGLAFTD---EH 590 (609)
Q Consensus 524 ~-------~~~~~~~-~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~-~~~~~~~~h~~-~v~~~~~s~---~~ 590 (609)
. .....+. .|...|++++|++++ +|++++.|++|++|+...... .......+|.. .|++++|++ ++
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKT 310 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----C
T ss_pred CccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCce
Confidence 1 1122233 389999999999765 789999999999999865321 11223357887 899999984 57
Q ss_pred eEEEEeCCCcEEEEEccC
Q 007283 591 SVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 591 ~l~s~s~D~~i~~W~~~~ 608 (609)
+|+|+|.|++|++|++..
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 899999999999999864
No 31
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2e-38 Score=309.52 Aligned_cols=208 Identities=23% Similarity=0.431 Sum_probs=182.7
Q ss_pred cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 49 QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 49 ~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
....|.+|.+.|++++|+|+|++||+++.||+|+|||+.+++. ...+..|..+|.+++|+|++++|++++++. .++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~---~i~ 80 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-VRSIQVTETPVRAGKFIARKNWIIVGSDDF---RIR 80 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEEEGGGTEEEEEETTS---EEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce-eEEeeccCCcEEEEEEeCCCCEEEEECCCC---EEE
Confidence 3456889999999999999999999999999999999988754 456788899999999999999999988654 588
Q ss_pred EEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC-ceeeeccCcccceEEEEEcC-CCCEEEEE
Q 007283 129 AFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF-KFKLSHRGHSNFVNCVRFSP-DGSKFISV 206 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~l~~s~-dg~~l~s~ 206 (609)
+|+.+++..+..+.+|...|.+++|+|++.. +++|+.|+.+++||.+.. .....+.+|...|.+++|+| ++..|++|
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 8998899999999999999999999999985 999999999999998765 45567889999999999999 57899999
Q ss_pred eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECC--CCCeEEEEeCCCcEEEeecc
Q 007283 207 SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSP--DGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 207 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~sp--d~~~l~s~s~d~~i~iwd~~ 263 (609)
+.|++|++||.........+. .+|...|..+.|+| ++.+|++++.|++|++||++
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 216 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLT--TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEE--CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT
T ss_pred eCCCeEEEEECCCCCccceec--cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC
Confidence 999999999998776554442 35777899999987 77899999999999999975
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-39 Score=325.64 Aligned_cols=303 Identities=22% Similarity=0.373 Sum_probs=242.4
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEe
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYD 216 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd 216 (609)
+...+.+|.+.|++++|+|++.. |++|+.|+++++||..+.+....+.+|...|.+++|+|+|++|++|+.|+.+++|+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~-l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNW-IVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSC-EEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EeecccccccEEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 44678999999999999999985 99999999999999999988888999999999999999999999999999999999
Q ss_pred CCCCcc----ccccCcCCCCccceEEEEECCCC-CeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEE
Q 007283 217 GKTADK----IGELSPEDGHKGSVYAVSWSPDG-KQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLW 291 (609)
Q Consensus 217 ~~~~~~----~~~~~~~~~h~~~V~~l~~spd~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (609)
..+... ........+|.+.|.++.|+|++ ..|++++.|++|++||+.. ++....+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~---~~~~~~~~~--------------- 198 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT---GQRISIFGS--------------- 198 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT---CCEEEEECC---------------
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC---CcEEEEeec---------------
Confidence 865321 11112235899999999999974 5799999999999999863 222221110
Q ss_pred cCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccccccee
Q 007283 292 QNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIK 371 (609)
Q Consensus 292 ~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~ 371 (609)
....+|...|.++.+.+.++.++++|+.|++|++|+...... .+.
T Consensus 199 --------------------------~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~---------~~~ 243 (380)
T 3iz6_a 199 --------------------------EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR---------AVR 243 (380)
T ss_dssp --------------------------CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC---------CCE
T ss_pred --------------------------ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc---------ceE
Confidence 012468889999998876778999999999999998642100 000
Q ss_pred EeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCcee
Q 007283 372 CFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVT 451 (609)
Q Consensus 372 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (609)
....+..++.
T Consensus 244 ----------------------------------------------------------------------~~~~h~~~v~ 253 (380)
T 3iz6_a 244 ----------------------------------------------------------------------TYHGHEGDIN 253 (380)
T ss_dssp ----------------------------------------------------------------------EECCCSSCCC
T ss_pred ----------------------------------------------------------------------EECCcCCCeE
Confidence 0001234688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecC-------CCceEEEEECCCCCEEEEEeCCCeEEEEEccCCc
Q 007283 452 ASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKH-------RGAVSVIRYSPDVSMFASGDVNREAIVWDRVSRE 524 (609)
Q Consensus 452 ~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h-------~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~ 524 (609)
+++++|+++++++|+.||+|++||++++... ..+..+ ...|.+++|+|+|.++++|+.|+.|++||....+
T Consensus 254 ~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL--QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp EEEECTTSSEEEEECSSSCEEEEETTTTEEE--EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred EEEEecCCCeEEEEcCCCeEEEEECCCCcEE--EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 9999999999999999999999999877643 233332 2358999999999999999999999999987765
Q ss_pred eEEee---ecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 525 VKLKN---MLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 525 ~~~~~---~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
..... ..+|...|++++|+||+++|++|+.|++|++|++..
T Consensus 332 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 332 MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 43321 157999999999999999999999999999999864
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3e-38 Score=313.06 Aligned_cols=321 Identities=16% Similarity=0.217 Sum_probs=264.7
Q ss_pred CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC
Q 007283 56 HAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG 135 (609)
Q Consensus 56 h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 135 (609)
|.+.|.+++|+|||+++|.+..++.+.+|........ .....|.+.|.+++|+|++++|++++++ .+++|+.+.+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~dg----~i~iw~~~~~ 82 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ-INTLNHGEVVCAVTISNPTRHVYTGGKG----CVKVWDISHP 82 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEE-EEEECCSSCCCEEEECSSSSEEEEECBS----EEEEEETTST
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccc-ceeccCCCceEEEEEecCCcEEEEcCCC----eEEEEECCCC
Confidence 4567999999999999998887777777766543322 2344688999999999999999987732 4778887765
Q ss_pred C---eeEEEe--cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc--eeeeccCcccceEEEEEcCCCCEEEEEeC
Q 007283 136 T---NVGEFD--GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK--FKLSHRGHSNFVNCVRFSPDGSKFISVSS 208 (609)
Q Consensus 136 ~---~~~~~~--~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 208 (609)
. ....+. +|...|.+++|+|++.. +++++.|+.+++|+....+ ....+.+|...|.+++|+|+++.|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 161 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCT-LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS 161 (337)
T ss_dssp TCCSCSEEEECSCTTSBEEEEEECTTSSE-EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred CceeeeecccccCCCCcEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC
Confidence 4 233444 78999999999999874 8899999999999988766 55667889999999999999999999999
Q ss_pred CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEE
Q 007283 209 DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVG 288 (609)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (609)
|+.+++||.++++.+..+ .+|.+.|.+++|+|++++|++++.|+.|++||+.. ++....
T Consensus 162 dg~v~~~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~--------------- 220 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQF---QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQ--------------- 220 (337)
T ss_dssp TSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEE---------------
T ss_pred CCcEEEEeCCCCceeeee---ecccCceEEEEECCCCCEEEEEecCCcEEEEECCC---CceEee---------------
Confidence 999999999988877665 36889999999999999999999999999999752 100000
Q ss_pred EEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccccc
Q 007283 289 CLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENS 368 (609)
Q Consensus 289 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~ 368 (609)
+ .
T Consensus 221 -------------------------------------------~-~---------------------------------- 222 (337)
T 1gxr_A 221 -------------------------------------------H-D---------------------------------- 222 (337)
T ss_dssp -------------------------------------------E-E----------------------------------
T ss_pred -------------------------------------------e-c----------------------------------
Confidence 0 0
Q ss_pred ceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCC
Q 007283 369 QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRF 448 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (609)
+..
T Consensus 223 -----------------------------------------------------------------------------~~~ 225 (337)
T 1gxr_A 223 -----------------------------------------------------------------------------FTS 225 (337)
T ss_dssp -----------------------------------------------------------------------------CSS
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 001
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe
Q 007283 449 PVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK 528 (609)
Q Consensus 449 ~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~ 528 (609)
++.+++++|+++++++++.|+.|++|++..... ..+..|.+.|.+++|+|+++++++++.|+.+++||+.+.+...
T Consensus 226 ~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~- 301 (337)
T 1gxr_A 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK---YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF- 301 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCE---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe---EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE-
Confidence 245677899999999999999999999987653 4567899999999999999999999999999999988776542
Q ss_pred eecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 529 NMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 529 ~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
...|...|++++|+|++++|++++.||.|++|++
T Consensus 302 -~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 302 -QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp -EEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred -EecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 3458899999999999999999999999999986
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.7e-39 Score=331.27 Aligned_cols=349 Identities=17% Similarity=0.207 Sum_probs=267.0
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV 138 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (609)
.+++++|+|+|++|++++.|++|++||..+.+... .
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~-~------------------------------------------- 93 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSK-M------------------------------------------- 93 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTT-T-------------------------------------------
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceee-E-------------------------------------------
Confidence 35578999999999999999999999987643210 0
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK 218 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~ 218 (609)
+..| ..+....|+|++. .+++|+.|+.+++|+....+....+.+|...|++++|+|++++|++++.|+.+++||..
T Consensus 94 --~~~~-~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 94 --LKRA-DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp --SCSC-CEEEEEEECSSSC-EEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred --EecC-CceEEEEEecCCC-EEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 0111 1223345667776 48889999999999998888888888999999999999999999999999999999999
Q ss_pred CCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEE
Q 007283 219 TADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVI 298 (609)
Q Consensus 219 ~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (609)
+++.+..+ .+|.+.|.+++|+|++++|++++.|++|++||+.. ++....+..
T Consensus 170 ~~~~~~~~---~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~~~~~~~~~---------------------- 221 (420)
T 3vl1_A 170 DGSNPRTL---IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT---GTTIHTFNR---------------------- 221 (420)
T ss_dssp TCCCCEEE---ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT---TEEEEEECB----------------------
T ss_pred CCcCceEE---cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC---CceeEEeec----------------------
Confidence 98877666 37999999999999999999999999999999863 333222211
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCC
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE 378 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
...|...|.++.+.+..... + .
T Consensus 222 ---------------------~~~~~~~v~~~~~~~~~~~~---------~-------------~--------------- 243 (420)
T 3vl1_A 222 ---------------------KENPHDGVNSIALFVGTDRQ---------L-------------H--------------- 243 (420)
T ss_dssp ---------------------TTBTTCCEEEEEEEECCCSS---------C-------------G---------------
T ss_pred ---------------------CCCCCCCccEEEEecCCcce---------e-------------e---------------
Confidence 01244455555543221100 0 0
Q ss_pred cEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC
Q 007283 379 EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD 458 (609)
Q Consensus 379 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 458 (609)
.....++.+++++|+
T Consensus 244 -----------------------------------------------------------------~~~~~~v~~~~~s~~ 258 (420)
T 3vl1_A 244 -----------------------------------------------------------------EISTSKKNNLEFGTY 258 (420)
T ss_dssp -----------------------------------------------------------------GGCCCCCCTTCSSCT
T ss_pred -----------------------------------------------------------------ecccCcccceEEcCC
Confidence 000123556678999
Q ss_pred CCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCC-EEEEEeCCCeEEEEEccCCceEEeeecC-CCCc
Q 007283 459 GSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVS-MFASGDVNREAIVWDRVSREVKLKNMLY-HTAR 536 (609)
Q Consensus 459 g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~-h~~~ 536 (609)
++++++|+.||.|++||++.+... .....+|...|.+++|+|++. ++++|+.|+.+++||+.+.+..+..+.. |...
T Consensus 259 ~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 337 (420)
T 3vl1_A 259 GKYVIAGHVSGVITVHNVFSKEQT-IQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTP 337 (420)
T ss_dssp TEEEEEEETTSCEEEEETTTCCEE-EEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSC
T ss_pred CCEEEEEcCCCeEEEEECCCCcee-EEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCC
Confidence 999999999999999999876543 233457899999999999999 9999999999999999876543334444 7778
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEcCCCCC-------cceeEeccccCCeEEEEEc-CCC---eEEEEeCCCcEEEEE
Q 007283 537 INCLAWSPNNSMVATGSLDTCVIIYEIDKPAS-------SRMTIKGAHLGGVYGLAFT-DEH---SVVSSGEDACVRVWR 605 (609)
Q Consensus 537 i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~-------~~~~~~~~h~~~v~~~~~s-~~~---~l~s~s~D~~i~~W~ 605 (609)
|+++.+ |++++|++++.|++|++|++..+.. .......+|.+.|.+++|+ +++ .++++|.++.+.+|+
T Consensus 338 v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 338 INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 888865 5789999999999999999875321 1123455789999999999 666 689999999999999
Q ss_pred ccC
Q 007283 606 LTP 608 (609)
Q Consensus 606 ~~~ 608 (609)
+..
T Consensus 417 ~~~ 419 (420)
T 3vl1_A 417 LSN 419 (420)
T ss_dssp SCC
T ss_pred ccC
Confidence 864
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-38 Score=313.40 Aligned_cols=300 Identities=16% Similarity=0.160 Sum_probs=234.5
Q ss_pred ccccccCCCCcEEEEE-----CC-CCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCC
Q 007283 50 VSIYGEHAYPATVARF-----SP-NGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKG 123 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~-----sp-~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~ 123 (609)
...+.+|++.|++++| +| +|++||||+.|++|+|||+.+.+....
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~----------------------------- 64 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY----------------------------- 64 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-----------------------------
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-----------------------------
Confidence 3468899999999999 77 999999999999999999865431000
Q ss_pred cceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEE
Q 007283 124 KSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKF 203 (609)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 203 (609)
.+.....+.+|...|.+++|+|++.+ +++|+.|+.+++||..+++....+.+|...|.+++|+|++++|
T Consensus 65 ----------~~~~~~~l~~h~~~V~~~~~~~~~~~-l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 133 (343)
T 2xzm_R 65 ----------FGIPHKALTGHNHFVSDLALSQENCF-AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQI 133 (343)
T ss_dssp ----------SEEEEEEECCCSSCEEEEEECSSTTE-EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEE
T ss_pred ----------cccccchhccCCCceEEEEECCCCCE-EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEE
Confidence 00112346789999999999999874 8999999999999999998888999999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCC----------CeEEEEeCCCcEEEeecccCCCCceEEE
Q 007283 204 ISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDG----------KQVLTASADKSAKVWDISEDNHGKLKKT 273 (609)
Q Consensus 204 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~----------~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 273 (609)
++++.|+++++||..... ........+|...|.+++|+|++ .+|++++.|++|++||.. .+.
T Consensus 134 ~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~--- 205 (343)
T 2xzm_R 134 LSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQI--- 205 (343)
T ss_dssp EEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEE---
T ss_pred EEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----Cce---
Confidence 999999999999987433 22232234788999999999987 689999999999999842 111
Q ss_pred eccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEe
Q 007283 274 LTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWI 353 (609)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~ 353 (609)
...+.+|...|.++++++ +++++++++.|++|++|+
T Consensus 206 -------------------------------------------~~~~~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd 241 (343)
T 2xzm_R 206 -------------------------------------------RYTFKAHESNVNHLSISP-NGKYIATGGKDKKLLIWD 241 (343)
T ss_dssp -------------------------------------------EEEEECCSSCEEEEEECT-TSSEEEEEETTCEEEEEE
T ss_pred -------------------------------------------eEEEcCccccceEEEECC-CCCEEEEEcCCCeEEEEE
Confidence 123456888999999875 567999999999999997
Q ss_pred cCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEE
Q 007283 354 QGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVV 433 (609)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (609)
...... .
T Consensus 242 ~~~~~~---------~---------------------------------------------------------------- 248 (343)
T 2xzm_R 242 ILNLTY---------P---------------------------------------------------------------- 248 (343)
T ss_dssp SSCCSS---------C----------------------------------------------------------------
T ss_pred CCCCcc---------c----------------------------------------------------------------
Confidence 621100 0
Q ss_pred EeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEe-----------cCCCceEEEEECCC
Q 007283 434 LLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLE-----------KHRGAVSVIRYSPD 502 (609)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~-----------~h~~~i~~v~~s~~ 502 (609)
...+.....+.+++|+|+++++++| .|+.|++|++.+........+. +|...|.+++|+|+
T Consensus 249 -------~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 320 (343)
T 2xzm_R 249 -------QREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL 320 (343)
T ss_dssp -------SEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred -------ceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence 0000112347889999999987755 5888999998765432212222 68889999999999
Q ss_pred CCEEEEEeCCCeEEEEEccC
Q 007283 503 VSMFASGDVNREAIVWDRVS 522 (609)
Q Consensus 503 ~~~l~s~s~d~~v~iwd~~~ 522 (609)
|.+|++|+.|++|++|++.+
T Consensus 321 g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 321 GKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SCCEEEEETTSEEEEEEEEE
T ss_pred CCeEEEecCCceEEEEEEEc
Confidence 99999999999999999754
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=315.29 Aligned_cols=289 Identities=15% Similarity=0.138 Sum_probs=231.7
Q ss_pred CCccCcCceeEEeecCCCCeEEEeCCCEEEEEeCC-----CCc------cccccccCCCCcEEEEECCCCCEEEEEeCCC
Q 007283 11 VPSTERGRGILISGHPKSNSILYTNGRSVIILDLS-----NPL------QVSIYGEHAYPATVARFSPNGEWIASADVSG 79 (609)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~-----~~~------~~~~~~~h~~~v~~~~~sp~g~~las~~~d~ 79 (609)
.|..+.+....+.++|||..|+...+..+++||.. ... .......|+..|++++|+|++ +|++|+.||
T Consensus 25 ~~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg 103 (344)
T 4gqb_B 25 APACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSG 103 (344)
T ss_dssp SCSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTS
T ss_pred CcccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCC
Confidence 34444556679999999999988776666666521 111 111122456789999999996 577899999
Q ss_pred cEEEEcCCCCcee---eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeC
Q 007283 80 TVRIWGAHNDHVL---KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPS 156 (609)
Q Consensus 80 ~i~vWd~~~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (609)
+|||||+.+++.+ ...+.+|.+.|.+++|+|||++|++++.+. .+++|+..+++.+..+.+|...|.+++|+|+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~---~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI---CIKVWDLAQQVVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEEECCCSSCEEEEEECSS
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEEcCcCCceEEEEecCC
Confidence 9999999887632 234557899999999999999999988654 5789999899999999999999999999999
Q ss_pred CCeEEEEecCCCeEEEEeCCCCceeeec--cCcccceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCccccccCcCCCCc
Q 007283 157 RPFRIATCGEDFLVNFYEGPPFKFKLSH--RGHSNFVNCVRFSPD-GSKFISVSSDKKGIIYDGKTADKIGELSPEDGHK 233 (609)
Q Consensus 157 ~~~~i~t~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~l~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~ 233 (609)
+..++++|+.|+.|++||..+++....+ ..|...+.+++|+|+ +++|++|+.|++|++||.++++.+..+ .+|.
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~---~~h~ 257 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS---AVHS 257 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE---ECCS
T ss_pred CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE---cCCC
Confidence 9878999999999999999888776655 346667999999996 568899999999999999999887766 3799
Q ss_pred cceEEEEECCCC-CeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCC
Q 007283 234 GSVYAVSWSPDG-KQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSAND 312 (609)
Q Consensus 234 ~~V~~l~~spd~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 312 (609)
+.|++++|+|++ ++|++++.|++|++||+.. +++
T Consensus 258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~---~~~------------------------------------------ 292 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL---SEL------------------------------------------ 292 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTC---CEE------------------------------------------
T ss_pred CCEEEEEEccCCCeEEEEEeCCCeEEEEECCC---CcE------------------------------------------
Confidence 999999999998 5799999999999999752 111
Q ss_pred CCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCc
Q 007283 313 LEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGI 356 (609)
Q Consensus 313 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~ 356 (609)
..+.+|...|.+++|++.++.+++|++.|++|++|+...
T Consensus 293 -----~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 293 -----FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -----EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -----EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 123579999999999876667899999999999997754
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-38 Score=322.69 Aligned_cols=356 Identities=14% Similarity=0.185 Sum_probs=263.9
Q ss_pred EEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeC----CCCc------eeeeccC----------c
Q 007283 128 RAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEG----PPFK------FKLSHRG----------H 187 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~----~~~~------~~~~~~~----------h 187 (609)
.+|+|+..........|.+.|.+++|+|++...+++|+.|+.+++|+. ..++ ....+.. |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (425)
T 1r5m_A 28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKT 107 (425)
T ss_dssp ------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------
T ss_pred ccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCC
Confidence 355565554444455677999999999999845999999999999998 7666 2333322 6
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCC
Q 007283 188 SNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNH 267 (609)
Q Consensus 188 ~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~ 267 (609)
...|++++|+|++++|++++.|+.+++|| .+++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+..
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~--- 180 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVL---NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVIS--- 180 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEE---CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTT---
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeec---cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCC---
Confidence 78999999999999999999999999999 556655555 37899999999999999999999999999999863
Q ss_pred CceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCC
Q 007283 268 GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDG 347 (609)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg 347 (609)
++....+........ .+ .......+...+.++.+.+. ..+++++.|+
T Consensus 181 ~~~~~~~~~~~~~~~---------------------~~----------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g 227 (425)
T 1r5m_A 181 GTVMQHFELKETGGS---------------------SI----------NAENHSGDGSLGVDVEWVDD--DKFVIPGPKG 227 (425)
T ss_dssp TEEEEEECCC----------------------------------------------CCCBSCCEEEET--TEEEEECGGG
T ss_pred CcEEEEeeccccCcc---------------------ce----------eeccccCCcceeeEEEEcCC--CEEEEEcCCC
Confidence 344443322110000 00 00011122233666677654 5789999999
Q ss_pred cEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEE
Q 007283 348 LIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVS 427 (609)
Q Consensus 348 ~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (609)
.|++|+........
T Consensus 228 ~i~~~d~~~~~~~~------------------------------------------------------------------ 241 (425)
T 1r5m_A 228 AIFVYQITEKTPTG------------------------------------------------------------------ 241 (425)
T ss_dssp CEEEEETTCSSCSE------------------------------------------------------------------
T ss_pred eEEEEEcCCCceee------------------------------------------------------------------
Confidence 99999764321000
Q ss_pred ecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEE
Q 007283 428 TDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFA 507 (609)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~ 507 (609)
....+..++.+++++|+++++++++.|+.|++|++..+.. ...+.+|...|.+++|+|++ +++
T Consensus 242 --------------~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~ 304 (425)
T 1r5m_A 242 --------------KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVI 304 (425)
T ss_dssp --------------EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEE
T ss_pred --------------eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEE
Confidence 0001224578899999999999999999999999976544 35667899999999999999 999
Q ss_pred EEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCC------------------c
Q 007283 508 SGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPAS------------------S 569 (609)
Q Consensus 508 s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~------------------~ 569 (609)
+++.|+.+++||+.+.+. +..+..|...|++++|+|++++|++++.|+.|++|++..... .
T Consensus 305 ~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (425)
T 1r5m_A 305 SCSMDGSVRLWSLKQNTL-LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIP 383 (425)
T ss_dssp EEETTSEEEEEETTTTEE-EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECC
T ss_pred EEeCCCcEEEEECCCCcE-eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccch
Confidence 999999999999877654 345667899999999999999999999999999999864220 0
Q ss_pred ceeEeccccC--CeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 570 RMTIKGAHLG--GVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 570 ~~~~~~~h~~--~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
......+|.. .|++++|+ ++++|++++.|+.|++|++.
T Consensus 384 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 384 LYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 3455567866 99999999 77899999999999999985
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.5e-38 Score=310.35 Aligned_cols=301 Identities=23% Similarity=0.325 Sum_probs=234.3
Q ss_pred eEEEecCCccEEEEEE-----ee-CCCeEEEEecCCCeEEEEeCCCC-------ceeeeccCcccceEEEEEcCCCCEEE
Q 007283 138 VGEFDGHSRRVLSCAF-----KP-SRPFRIATCGEDFLVNFYEGPPF-------KFKLSHRGHSNFVNCVRFSPDGSKFI 204 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~-----~p-~~~~~i~t~~~d~~i~~~~~~~~-------~~~~~~~~h~~~v~~l~~s~dg~~l~ 204 (609)
...+.+|.+.|.+++| +| ++. .|++|+.|+++++|+.... .....+.+|...|++++|+|++.+|+
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 4578899999999999 66 555 6999999999999997532 34456789999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccc
Q 007283 205 SVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDD 284 (609)
Q Consensus 205 s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 284 (609)
+++.|+++++||.++++.+..+ .+|.+.|.+++|+|++++|++++.|++|++||+.. ......
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~----~~~~~~---------- 155 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRF---VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG----ECKFSS---------- 155 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEE---ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS----CEEEEC----------
T ss_pred EEcCCCcEEEEECCCCcEEEEE---cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC----Cceeee----------
Confidence 9999999999999999877666 37999999999999999999999999999999751 111000
Q ss_pred eEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc
Q 007283 285 MLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR 364 (609)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~ 364 (609)
....+|...|.++++++....
T Consensus 156 ---------------------------------~~~~~~~~~v~~~~~~~~~~~-------------------------- 176 (343)
T 2xzm_R 156 ---------------------------------AEKENHSDWVSCVRYSPIMKS-------------------------- 176 (343)
T ss_dssp ---------------------------------CTTTSCSSCEEEEEECCCCCS--------------------------
T ss_pred ---------------------------------ecccCCCceeeeeeecccccc--------------------------
Confidence 001245566666655421000
Q ss_pred ccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe
Q 007283 365 KENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI 444 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (609)
T Consensus 177 -------------------------------------------------------------------------------- 176 (343)
T 2xzm_R 177 -------------------------------------------------------------------------------- 176 (343)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCc
Q 007283 445 NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSRE 524 (609)
Q Consensus 445 ~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~ 524 (609)
...+.|.+.++++|+.|++|++||.. .. ....+.+|.+.|.+++|+|+|++|++|+.|++|++||+....
T Consensus 177 -------~~~~~~~~~~l~s~~~d~~i~iwd~~-~~--~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 177 -------ANKVQPFAPYFASVGWDGRLKVWNTN-FQ--IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp -------CSCCCSSCCEEEEEETTSEEEEEETT-TE--EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred -------ccccCCCCCEEEEEcCCCEEEEEcCC-Cc--eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 00124567789999999999999943 22 245678999999999999999999999999999999985433
Q ss_pred eEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEe-----------ccccCCeEEEEEc-CCCeE
Q 007283 525 VKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIK-----------GAHLGGVYGLAFT-DEHSV 592 (609)
Q Consensus 525 ~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~-----------~~h~~~v~~~~~s-~~~~l 592 (609)
..... ..+...|++++|+|++++++++ .|+.|++|++........... .+|...|++++|+ ++++|
T Consensus 247 ~~~~~-~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 247 YPQRE-FDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp SCSEE-EECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred cccee-ecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 22222 2356679999999999988755 588899999875332111111 2688999999999 78899
Q ss_pred EEEeCCCcEEEEEcc
Q 007283 593 VSSGEDACVRVWRLT 607 (609)
Q Consensus 593 ~s~s~D~~i~~W~~~ 607 (609)
++++.||+|++|++.
T Consensus 325 ~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEETTSEEEEEEEE
T ss_pred EEecCCceEEEEEEE
Confidence 999999999999985
No 39
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.2e-38 Score=307.27 Aligned_cols=205 Identities=21% Similarity=0.290 Sum_probs=180.5
Q ss_pred cccccCCCCcEEEEECCCC-CEEEEEeCCCcEEEEcCCCCc----eeeEEEeecccceeEEEECCCCCEEEEEECCCCcc
Q 007283 51 SIYGEHAYPATVARFSPNG-EWIASADVSGTVRIWGAHNDH----VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKS 125 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~g-~~las~~~d~~i~vWd~~~~~----~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~ 125 (609)
..+.+|.+.|++++|+|++ ++|+||+.|++|++|++.... .....+..|...|.+++|+|||++|++++.+.
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~--- 87 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK--- 87 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC---
Confidence 4578999999999999965 899999999999999986432 23356788999999999999999999988654
Q ss_pred eEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCC------
Q 007283 126 LVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPD------ 199 (609)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~d------ 199 (609)
.+++|+..++..+..+.+|...|.+++|+|++. .+++|+.|+.+++||.. .+....+.+|...|.++.|+|.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCC
Confidence 588898888888999999999999999999987 49999999999999986 4566678899999999999985
Q ss_pred CCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 200 GSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 200 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+..|++++.|+.+++||..+.+....+ .+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQIEADF---IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTEEEEEE---CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred ccEEEEEeCCCEEEEEECCcchhheee---cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 448999999999999999887766555 4799999999999999999999999999999975
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-39 Score=333.52 Aligned_cols=340 Identities=11% Similarity=0.134 Sum_probs=262.1
Q ss_pred CCcEEEEECCCCC-EEEEE----------eCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcce
Q 007283 58 YPATVARFSPNGE-WIASA----------DVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSL 126 (609)
Q Consensus 58 ~~v~~~~~sp~g~-~las~----------~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~ 126 (609)
..|.+++|+|+|+ +||++ +.|++|+|||+.+++....
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-------------------------------- 60 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-------------------------------- 60 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC--------------------------------
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE--------------------------------
Confidence 4688999999997 99999 8899999999987542100
Q ss_pred EEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC----CceeeeccCcccceEEEEEcCC-CC
Q 007283 127 VRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP----FKFKLSHRGHSNFVNCVRFSPD-GS 201 (609)
Q Consensus 127 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~----~~~~~~~~~h~~~v~~l~~s~d-g~ 201 (609)
+. ...|...|.+++|+|++.. |++++.|+.+++|+... .+....+.+|...|++++|+|+ ++
T Consensus 61 -----------~~-~~~~~~~v~~~~~s~~~~~-l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 127 (416)
T 2pm9_A 61 -----------IA-SLQVDSKFNDLDWSHNNKI-IAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN 127 (416)
T ss_dssp -----------SC-CCCCSSCEEEEEECSSSSC-EEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT
T ss_pred -----------EE-EEecCCceEEEEECCCCCe-EEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC
Confidence 00 0135566777788777764 78888888999998776 3466778899999999999998 88
Q ss_pred EEEEEeCCCcEEEEeCCCCc------cccccCcCCCCccceEEEEECCC-CCeEEEEeCCCcEEEeecccCCCCceEEEe
Q 007283 202 KFISVSSDKKGIIYDGKTAD------KIGELSPEDGHKGSVYAVSWSPD-GKQVLTASADKSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 202 ~l~s~~~d~~i~iwd~~~~~------~~~~~~~~~~h~~~V~~l~~spd-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 274 (609)
+|++++.|+.|++||..+++ ....+....+|...|.+++|+|+ +.+|++++.|+.|++||+.. ++....+
T Consensus 128 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~---~~~~~~~ 204 (416)
T 2pm9_A 128 VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA---KKEVIHL 204 (416)
T ss_dssp BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT---TEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC---CCcceEE
Confidence 99999999999999998876 33333233578999999999999 78999999999999999863 2232222
Q ss_pred ccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCC---cEEE
Q 007283 275 TPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDG---LIVK 351 (609)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg---~i~~ 351 (609)
... ....+|...|.++++++.++.++++++.|+ .|++
T Consensus 205 ~~~----------------------------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 205 SYT----------------------------------------SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCC----------------------------------------CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred ecc----------------------------------------ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 110 011346788999999876567999999999 9999
Q ss_pred EecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEeccc
Q 007283 352 WIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSG 431 (609)
Q Consensus 352 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (609)
|+...... .+.. +
T Consensus 245 ~d~~~~~~---------~~~~----------------------------~------------------------------ 257 (416)
T 2pm9_A 245 WDLRNANT---------PLQT----------------------------L------------------------------ 257 (416)
T ss_dssp EETTSTTS---------CSBC----------------------------C------------------------------
T ss_pred EeCCCCCC---------CcEE----------------------------e------------------------------
Confidence 97653210 0000 0
Q ss_pred EEEeeCCeeeEEeccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCC-CEEEEE
Q 007283 432 VVLLRGAEVVSTINLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDV-SMFASG 509 (609)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~-~~l~s~ 509 (609)
. ..+...+.+++++| +++++++|+.|+.|++||++.+.. ...+.+|.+.|.+++|+|++ .+++++
T Consensus 258 ----~-------~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 258 ----N-------QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--LSQFPARGNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp ----C-------SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE--EEEEECSSSCCCCEEECTTCTTEEEEC
T ss_pred ----e-------cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc--ceeecCCCCceEEEEECCCCCCEEEEE
Confidence 0 01124578899999 999999999999999999987654 45678999999999999999 899999
Q ss_pred eCCCeEEEEEccCCceEEe----------------------------------eecCCCCceEEEEECCCCcEEEEEeCC
Q 007283 510 DVNREAIVWDRVSREVKLK----------------------------------NMLYHTARINCLAWSPNNSMVATGSLD 555 (609)
Q Consensus 510 s~d~~v~iwd~~~~~~~~~----------------------------------~~~~h~~~i~~l~~s~d~~~l~s~s~D 555 (609)
+.|+.+++||+.+...... ....|...+++++|||||++||+++.|
T Consensus 325 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d 404 (416)
T 2pm9_A 325 SFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDG 404 (416)
T ss_dssp CSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTS
T ss_pred ecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCC
Confidence 9999999999876432110 011166778899999999999999999
Q ss_pred CeEEEEEcCC
Q 007283 556 TCVIIYEIDK 565 (609)
Q Consensus 556 ~~v~vw~~~~ 565 (609)
++|+||++.+
T Consensus 405 ~~v~~w~~~~ 414 (416)
T 2pm9_A 405 KGVSITNPKI 414 (416)
T ss_dssp SCBCCBCCCC
T ss_pred CeEEEEEecc
Confidence 9999999865
No 41
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-37 Score=313.10 Aligned_cols=285 Identities=22% Similarity=0.371 Sum_probs=229.3
Q ss_pred cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcc------------------cceEEEEEcCCCCEEE
Q 007283 143 GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHS------------------NFVNCVRFSPDGSKFI 204 (609)
Q Consensus 143 ~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~------------------~~v~~l~~s~dg~~l~ 204 (609)
+|...|.+++|+|++.+ +|+|+ ++.+++|+...++....+.+|. ..|.+++|+|+|++|+
T Consensus 62 ~h~~~V~~v~fspdg~~-la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEY-LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSE-EEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCE-EEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 69999999999999985 77765 6789999998887766665543 2499999999999999
Q ss_pred EEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccc
Q 007283 205 SVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDD 284 (609)
Q Consensus 205 s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 284 (609)
+|+.|+.|++||..+++.+..+ .+|...|.+++|+|++++|++++.|++|++||+.. ++....
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~----------- 202 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMIL---QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLT----------- 202 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEE-----------
T ss_pred EEcCCCeEEEEECCCCcEEEEE---ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEE-----------
Confidence 9999999999999988877665 47999999999999999999999999999999752 100000
Q ss_pred eEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc
Q 007283 285 MLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR 364 (609)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~ 364 (609)
+. +
T Consensus 203 -----------------------------------~~-~----------------------------------------- 205 (393)
T 1erj_A 203 -----------------------------------LS-I----------------------------------------- 205 (393)
T ss_dssp -----------------------------------EE-C-----------------------------------------
T ss_pred -----------------------------------EE-c-----------------------------------------
Confidence 00 0
Q ss_pred ccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe
Q 007283 365 KENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI 444 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (609)
T Consensus 206 -------------------------------------------------------------------------------- 205 (393)
T 1erj_A 206 -------------------------------------------------------------------------------- 205 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeE-----EEecCCCceEEEEECCCCCEEEEEeCCCeEEEE
Q 007283 445 NLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEA-----VLEKHRGAVSVIRYSPDVSMFASGDVNREAIVW 518 (609)
Q Consensus 445 ~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~-----~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iw 518 (609)
...+.+++++| +++++++|+.|+.|++||+..+.+.... ...+|...|.+++|+|+++++++|+.|++|++|
T Consensus 206 --~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 206 --EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp --SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred --CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 01134556777 8899999999999999998876543211 125799999999999999999999999999999
Q ss_pred EccCCce-----------EEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc
Q 007283 519 DRVSREV-----------KLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT 587 (609)
Q Consensus 519 d~~~~~~-----------~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s 587 (609)
|+.+... ....+.+|...|++++|+|++++|++|+.|++|++||+..+. ....+.+|...|.+++|+
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--PLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEEC
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--EEEEECCCCCCEEEEEec
Confidence 9865321 123456899999999999999999999999999999987643 345567899999999997
Q ss_pred C-------CCeEEEEeCCCcEEEEEcc
Q 007283 588 D-------EHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 588 ~-------~~~l~s~s~D~~i~~W~~~ 607 (609)
+ +++|+|+|.|++|++|++.
T Consensus 362 ~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 362 NGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp SSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCcCcCCCCCEEEEECCCCcEEECccc
Confidence 4 4679999999999999985
No 42
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-39 Score=327.75 Aligned_cols=345 Identities=10% Similarity=0.136 Sum_probs=264.1
Q ss_pred ccEEEEEEeeCCCeEEEEe----------cCCCeEEEEeCCCCce--eeeccCcccceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 146 RRVLSCAFKPSRPFRIATC----------GEDFLVNFYEGPPFKF--KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 146 ~~v~~~~~~p~~~~~i~t~----------~~d~~i~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
..|.+++|+|++..++++| +.|+.+++|+....+. ......|...|++++|+|++++|++++.|+.++
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 4678899999988679999 8999999999877652 222346888999999999999999999999999
Q ss_pred EEeCCC----CccccccCcCCCCccceEEEEECCC-CCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEE
Q 007283 214 IYDGKT----ADKIGELSPEDGHKGSVYAVSWSPD-GKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVG 288 (609)
Q Consensus 214 iwd~~~----~~~~~~~~~~~~h~~~V~~l~~spd-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (609)
+||..+ .+.+..+ .+|.+.|.+++|+|+ +.+|++++.|++|++||+........ ..
T Consensus 93 vw~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~-------------- 153 (416)
T 2pm9_A 93 LYSTNEANNAINSMARF---SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPS--NY-------------- 153 (416)
T ss_dssp EECCSSTTSCCCEEEEC---CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTT--TC--------------
T ss_pred Eeecccccccccchhhc---cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccc--cc--------------
Confidence 999887 2344443 479999999999998 89999999999999999864210000 00
Q ss_pred EEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccccc
Q 007283 289 CLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENS 368 (609)
Q Consensus 289 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~ 368 (609)
.........+|...|.++++++..+.++++++.|+.|++|+...+....
T Consensus 154 ------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~------- 202 (416)
T 2pm9_A 154 ------------------------TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI------- 202 (416)
T ss_dssp ------------------------CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE-------
T ss_pred ------------------------cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce-------
Confidence 0000112346888999999986556899999999999999865421000
Q ss_pred ceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCC
Q 007283 369 QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRF 448 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (609)
.+..... ...+..
T Consensus 203 ----------------------~~~~~~~---------------------------------------------~~~~~~ 215 (416)
T 2pm9_A 203 ----------------------HLSYTSP---------------------------------------------NSGIKQ 215 (416)
T ss_dssp ----------------------EECCCCC---------------------------------------------SSCCCC
T ss_pred ----------------------EEecccc---------------------------------------------ccccCC
Confidence 0000000 000124
Q ss_pred ceeEEEEcCCC-CEEEEEeCCC---cEEEEEecCCeeeeeEEEe-cCCCceEEEEECC-CCCEEEEEeCCCeEEEEEccC
Q 007283 449 PVTASAIAPDG-SEAIIGSQDG---KLRVYSIRGDTLTEEAVLE-KHRGAVSVIRYSP-DVSMFASGDVNREAIVWDRVS 522 (609)
Q Consensus 449 ~~~~~~~sp~g-~~l~~gs~dg---~i~iw~~~~~~~~~~~~~~-~h~~~i~~v~~s~-~~~~l~s~s~d~~v~iwd~~~ 522 (609)
++.+++++|++ .++++++.|+ .|++||++.... ....+. +|...|.+++|+| ++.++++++.|+++++||+.+
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 58899999997 6899999999 999999986522 134556 8999999999999 999999999999999999887
Q ss_pred CceEEeeecCCCCceEEEEECCCC-cEEEEEeCCCeEEEEEcCCCCCccee-----------------------------
Q 007283 523 REVKLKNMLYHTARINCLAWSPNN-SMVATGSLDTCVIIYEIDKPASSRMT----------------------------- 572 (609)
Q Consensus 523 ~~~~~~~~~~h~~~i~~l~~s~d~-~~l~s~s~D~~v~vw~~~~~~~~~~~----------------------------- 572 (609)
.+. +..+..|...|++++|+|++ ++|++++.|+.|++|++.........
T Consensus 295 ~~~-~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (416)
T 2pm9_A 295 AEQ-LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSV 373 (416)
T ss_dssp CCE-EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCS
T ss_pred Ccc-ceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccc
Confidence 654 44567899999999999999 89999999999999999753311100
Q ss_pred ----EeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEccCC
Q 007283 573 ----IKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLTPN 609 (609)
Q Consensus 573 ----~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~~ 609 (609)
....|...+.+++|+ ++++|++++.|++|++|++.++
T Consensus 374 ~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 374 FHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 001167788899999 7788899999999999999764
No 43
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.6e-37 Score=303.92 Aligned_cols=326 Identities=14% Similarity=0.156 Sum_probs=255.7
Q ss_pred CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccc
Q 007283 144 HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKI 223 (609)
Q Consensus 144 h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~ 223 (609)
+...|.+++|+|++.. ++++..+..+..|..+.........+|...|++++|+|++++|++++ |+.+++||..+++..
T Consensus 8 ~~~~v~~~~~s~dg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQM-QPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSSSCE-EECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCCCCE-EEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 3557889999999986 55555554444454444333444558999999999999999999998 999999999877644
Q ss_pred cccCcC--CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEc
Q 007283 224 GELSPE--DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSL 301 (609)
Q Consensus 224 ~~~~~~--~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (609)
..+... .+|...|.+++|+|++++|++++.|+.|++||+... +..
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---~~~------------------------------ 132 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---TPR------------------------------ 132 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----E------------------------------
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---Ccc------------------------------
Confidence 333211 268899999999999999999999999999998631 100
Q ss_pred CCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEE
Q 007283 302 GGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIV 381 (609)
Q Consensus 302 ~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (609)
....+.+|...|.++++++ ++..+++++.||.|++|+...+.. +
T Consensus 133 --------------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~----------~----------- 176 (337)
T 1gxr_A 133 --------------IKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL----------V----------- 176 (337)
T ss_dssp --------------EEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE----------E-----------
T ss_pred --------------eeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCce----------e-----------
Confidence 0122445778888888875 557899999999999997643210 0
Q ss_pred EEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCE
Q 007283 382 TSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSE 461 (609)
Q Consensus 382 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 461 (609)
..+ ..+..++.+++++|++++
T Consensus 177 --------~~~---------------------------------------------------~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 177 --------RQF---------------------------------------------------QGHTDGASCIDISNDGTK 197 (337)
T ss_dssp --------EEE---------------------------------------------------CCCSSCEEEEEECTTSSE
T ss_pred --------eee---------------------------------------------------ecccCceEEEEECCCCCE
Confidence 000 001245788999999999
Q ss_pred EEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEE
Q 007283 462 AIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLA 541 (609)
Q Consensus 462 l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~ 541 (609)
+++++.||.|++||++.+.... ...|...+.+++|+|++.++++++.|+.+++||+.+.+. ..+..|...|++++
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~~~v~~~~ 272 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQ---QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK--YQLHLHESCVLSLK 272 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEE---EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE--EEECCCSSCEEEEE
T ss_pred EEEEecCCcEEEEECCCCceEe---eecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe--EEEcCCccceeEEE
Confidence 9999999999999998776432 235788999999999999999999999999999887654 24678999999999
Q ss_pred ECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 542 WSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 542 ~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
|+|++++|++++.|+.|++|++.... . .....|...|.+++|+ ++++|++++.|+.|++|++.
T Consensus 273 ~~~~~~~l~~~~~dg~i~~~~~~~~~--~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 273 FAYCGKWFVSTGKDNLLNAWRTPYGA--S-IFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCC--E-EEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ECCCCCEEEEecCCCcEEEEECCCCe--E-EEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999999999999997643 2 2334688999999999 77899999999999999973
No 44
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.8e-36 Score=305.48 Aligned_cols=303 Identities=24% Similarity=0.328 Sum_probs=232.3
Q ss_pred ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCc------------------cEEEEEEeeCCCe
Q 007283 98 VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSR------------------RVLSCAFKPSRPF 159 (609)
Q Consensus 98 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------------------~v~~~~~~p~~~~ 159 (609)
.|...|.+++|||||++|++.+++ .+++|+...+..+..+..|.. .|.+++|+|++..
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNK----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBS----CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCC----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 588899999999999999886542 467888888887777765532 4899999999985
Q ss_pred EEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEE
Q 007283 160 RIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAV 239 (609)
Q Consensus 160 ~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l 239 (609)
+++|+.|+.|++||..+.+....+.+|...|.+++|+|++++|++++.|+++++||.++++....+ .+...|.++
T Consensus 138 -l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----~~~~~v~~~ 212 (393)
T 1erj_A 138 -LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----SIEDGVTTV 212 (393)
T ss_dssp -EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----ECSSCEEEE
T ss_pred -EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE----EcCCCcEEE
Confidence 999999999999999999988899999999999999999999999999999999999998876655 356679999
Q ss_pred EECC-CCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCce
Q 007283 240 SWSP-DGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPL 318 (609)
Q Consensus 240 ~~sp-d~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 318 (609)
+|+| ++++|++++.|++|++||+.. ++....+.. ...
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~---~~~~~~~~~---------------------------------------~~~ 250 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSET---GFLVERLDS---------------------------------------ENE 250 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTT---CCEEEEEC-------------------------------------------
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCC---CcEEEeecc---------------------------------------ccc
Confidence 9999 899999999999999999863 222222110 001
Q ss_pred eeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCc
Q 007283 319 QLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQ 398 (609)
Q Consensus 319 ~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 398 (609)
...+|...|.+++|++ ++.++++++.|++|++|+........
T Consensus 251 ~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~------------------------------------- 292 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKS------------------------------------- 292 (393)
T ss_dssp --CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC--------------------------------------------
T ss_pred CCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcc-------------------------------------
Confidence 1235666777777653 34567777777777777542110000
Q ss_pred cccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecC
Q 007283 399 CGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRG 478 (609)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~ 478 (609)
... .+.
T Consensus 293 --------------------------------------------------~~~----~~~-------------------- 298 (393)
T 1erj_A 293 --------------------------------------------------DSK----TPN-------------------- 298 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------ccc----CCC--------------------
Confidence 000 000
Q ss_pred CeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECC------CCcEEEEE
Q 007283 479 DTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSP------NNSMVATG 552 (609)
Q Consensus 479 ~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~------d~~~l~s~ 552 (609)
.......+.+|...|.+++|+|++.++++|+.|++|++||..+++. +..+.+|...|++++|+| ++++||||
T Consensus 299 -~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~-~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 299 -SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP-LLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred -CCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE-EEEECCCCCCEEEEEecCCcCcCCCCCEEEEE
Confidence 0011234568999999999999999999999999999999887664 445778999999999986 68999999
Q ss_pred eCCCeEEEEEcCC
Q 007283 553 SLDTCVIIYEIDK 565 (609)
Q Consensus 553 s~D~~v~vw~~~~ 565 (609)
+.|++|++|++..
T Consensus 377 s~Dg~i~iW~~~~ 389 (393)
T 1erj_A 377 SGDCKARIWKYKK 389 (393)
T ss_dssp ETTSEEEEEEEEE
T ss_pred CCCCcEEECcccc
Confidence 9999999999853
No 45
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3e-37 Score=307.98 Aligned_cols=289 Identities=15% Similarity=0.145 Sum_probs=229.9
Q ss_pred CCccCcCceeEEeecCCCCeEEEeC-------CCEEEEEeCCCCcccc----ccccCCCCcEEEEECCCCCEEEEEeCCC
Q 007283 11 VPSTERGRGILISGHPKSNSILYTN-------GRSVIILDLSNPLQVS----IYGEHAYPATVARFSPNGEWIASADVSG 79 (609)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~i~~~~~~~~~~----~~~~h~~~v~~~~~sp~g~~las~~~d~ 79 (609)
.|..|.+....++++|||..|+++. +..+.+|+..++.... ...+|...|++++|+|++++|+ ++.||
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~-~s~dg 115 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILV-ASDSG 115 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEE-EETTS
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEE-EECCC
Confidence 3566788888999999999999874 3478899887655322 2347899999999999997665 66899
Q ss_pred cEEEEcCCCCcee---eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeC
Q 007283 80 TVRIWGAHNDHVL---KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPS 156 (609)
Q Consensus 80 ~i~vWd~~~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (609)
+|+|||+.+++.. ......|...|.+++|+|||++|++++.+. .+++|+...+..+..+.+|...|.+++|+|+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg---~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF---SVKVWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS---CEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 9999999876532 233456888999999999999999987654 4788888888889999999999999999999
Q ss_pred CCeEEEEecCCCeEEEEeCCCCceeee--ccCcccceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccccccCcCCCCc
Q 007283 157 RPFRIATCGEDFLVNFYEGPPFKFKLS--HRGHSNFVNCVRFSPDG-SKFISVSSDKKGIIYDGKTADKIGELSPEDGHK 233 (609)
Q Consensus 157 ~~~~i~t~~~d~~i~~~~~~~~~~~~~--~~~h~~~v~~l~~s~dg-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~ 233 (609)
+...+++++.|+.+++||..+.+.... +..|...+.+++|+|++ .+|++|+.|+.|++||.++++.+..+ .+|.
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~---~~~~ 269 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS---AVHS 269 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE---CCCS
T ss_pred CCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE---eccc
Confidence 877799999999999999887765544 44677889999999985 58899999999999999998877666 3789
Q ss_pred cceEEEEECCCC-CeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCC
Q 007283 234 GSVYAVSWSPDG-KQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSAND 312 (609)
Q Consensus 234 ~~V~~l~~spd~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 312 (609)
..|++++|+|++ ++|++++.|++|++||++. +++.
T Consensus 270 ~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~---~~~~----------------------------------------- 305 (357)
T 4g56_B 270 QNITGLAYSYHSSPFLASISEDCTVAVLDADF---SEVF----------------------------------------- 305 (357)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTS---CEEE-----------------------------------------
T ss_pred eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---CcEe-----------------------------------------
Confidence 999999999987 5799999999999999852 2111
Q ss_pred CCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCc
Q 007283 313 LEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGI 356 (609)
Q Consensus 313 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~ 356 (609)
...+|...|.+++|++.++.+|+|++.||+|++|++..
T Consensus 306 ------~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 306 ------RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred ------EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 12358899999999876778999999999999998743
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.6e-36 Score=295.00 Aligned_cols=292 Identities=28% Similarity=0.410 Sum_probs=243.5
Q ss_pred ccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 50 VSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
...+.+|.+.|++++|+|+|++||+++.|++|+||+..+++. ...+..|...|.+++|+||+++|++++.+. .+++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~i~v 91 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKLGISDVAWSSDSNLLVSASDDK---TLKI 91 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc-chhhccCCCceEEEEEcCCCCEEEEECCCC---EEEE
Confidence 345789999999999999999999999999999999987664 446788999999999999999999988644 5788
Q ss_pred EEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC
Q 007283 130 FMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 209 (609)
|+.+.+..+..+.+|...|.+++|+|++.. +++|+.|+.+++||..+.+....+.+|...|.+++|+|++++|++++.|
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 888888889999999999999999999874 9999999999999999988888899999999999999999999999999
Q ss_pred CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 210 KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 210 ~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+.+++||..+++.+..+. ..+...+..++|+|++++|++++.|+.|++||+.. ++....+...... ........
T Consensus 171 ~~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~~~~~-~~~~~~~~ 244 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK---GKCLKTYTGHKNE-KYCIFANF 244 (312)
T ss_dssp SCEEEEETTTCCEEEEEC--CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT---TEEEEEECSSCCS-SSCCCEEE
T ss_pred CcEEEEECCCCceeeEEe--ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC---CcEEEEEEecCCc-eEEEEEEE
Confidence 999999999888766553 35677899999999999999999999999999873 4455554322211 11111122
Q ss_pred E-EcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe--cCCcEEEEec
Q 007283 290 L-WQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS--YDGLIVKWIQ 354 (609)
Q Consensus 290 ~-~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s--~dg~i~~W~~ 354 (609)
. .++.++++++.||.|++|++... .....+.+|...|.++++++. +.++++++ .|++|++|..
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~p~-~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTK-EIVQKLQGHTDVVISTACHPT-ENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTC-CEEEEECCCSSCEEEEEECSS-SSEEEEEECTTTCCEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCc-hhhhhhhccCCcEEEEeecCc-CCceEEEEccCCccEEEecC
Confidence 2 23557899999999999998653 334568899999999998754 46888886 6999999964
No 47
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.8e-36 Score=294.05 Aligned_cols=291 Identities=23% Similarity=0.389 Sum_probs=239.7
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDG 217 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~ 217 (609)
...+.+|...|.+++|+|++. .+++|+.|+.+++|+...++....+.+|...|.+++|+|++++|++++.|+.+++||.
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 346789999999999999988 4999999999999999888888889999999999999999999999999999999999
Q ss_pred CCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEE
Q 007283 218 KTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLV 297 (609)
Q Consensus 218 ~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (609)
.+++.+..+ .+|...|.+++|+|++++|++++.|++|++||+.. ++..
T Consensus 95 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~-------------------------- 142 (312)
T 4ery_A 95 SSGKCLKTL---KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT---GKCL-------------------------- 142 (312)
T ss_dssp TTCCEEEEE---ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT---CCEE--------------------------
T ss_pred CCCcEEEEE---cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC---CEEE--------------------------
Confidence 998877666 37899999999999999999999999999999862 2111
Q ss_pred EEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeC
Q 007283 298 IVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE 377 (609)
Q Consensus 298 ~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (609)
..+..|...|.++++++ ++.++++++.||.|++|+...+.. +.
T Consensus 143 --------------------~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~----------~~------ 185 (312)
T 4ery_A 143 --------------------KTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQC----------LK------ 185 (312)
T ss_dssp --------------------EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCE----------EE------
T ss_pred --------------------EEecCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCce----------ee------
Confidence 12345777888888864 557999999999999997643210 00
Q ss_pred CcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC
Q 007283 378 EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP 457 (609)
Q Consensus 378 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 457 (609)
.+ ......++..++++|
T Consensus 186 -------------~~--------------------------------------------------~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 186 -------------TL--------------------------------------------------IDDDNPPVSFVKFSP 202 (312)
T ss_dssp -------------EE--------------------------------------------------CCSSCCCEEEEEECT
T ss_pred -------------EE--------------------------------------------------eccCCCceEEEEECC
Confidence 00 000113467789999
Q ss_pred CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCce---EEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCC
Q 007283 458 DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAV---SVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHT 534 (609)
Q Consensus 458 ~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i---~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~ 534 (609)
+++++++++.|+.|++||+..+.. ...+.+|...+ ......+++.++++|+.|+.|++||+.+.+. +..+.+|.
T Consensus 203 ~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~ 279 (312)
T 4ery_A 203 NGKYILAATLDNTLKLWDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI-VQKLQGHT 279 (312)
T ss_dssp TSSEEEEEETTTEEEEEETTTTEE--EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE-EEEECCCS
T ss_pred CCCEEEEEcCCCeEEEEECCCCcE--EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh-hhhhhccC
Confidence 999999999999999999987764 34566776543 3333457899999999999999999887654 45678899
Q ss_pred CceEEEEECCCCcEEEEEe--CCCeEEEEEcC
Q 007283 535 ARINCLAWSPNNSMVATGS--LDTCVIIYEID 564 (609)
Q Consensus 535 ~~i~~l~~s~d~~~l~s~s--~D~~v~vw~~~ 564 (609)
..|.+++|+|++++|++++ .|++|++|+.+
T Consensus 280 ~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 280 DVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 9999999999999999997 69999999864
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-37 Score=320.30 Aligned_cols=350 Identities=10% Similarity=0.006 Sum_probs=232.8
Q ss_pred cccceeEEEECCCC---------CEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCe
Q 007283 99 LSGRIDDLQWSPDG---------LRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFL 169 (609)
Q Consensus 99 ~~~~v~~~~~spdg---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~ 169 (609)
+.+.|.+++|+|++ ++|++...... . -..+|++. .+++++.|++
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~-------------------~-------~~~~~~~~-~laS~s~D~t 184 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM-------------------D-------EPLNEHLE-MFDKEKHSSC 184 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC---------------------------------------------CEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEeccc-------------------C-------Cccchhhh-hhccCCCCce
Confidence 46789999999986 45555432110 0 01357776 4899999999
Q ss_pred EEEEeCCCCcee----eeccCcccceEEEEEcCC------CCEEEEEeCCCcEEEEeCCCCcccc--------ccCcCCC
Q 007283 170 VNFYEGPPFKFK----LSHRGHSNFVNCVRFSPD------GSKFISVSSDKKGIIYDGKTADKIG--------ELSPEDG 231 (609)
Q Consensus 170 i~~~~~~~~~~~----~~~~~h~~~v~~l~~s~d------g~~l~s~~~d~~i~iwd~~~~~~~~--------~~~~~~~ 231 (609)
|++|+..+.+.. ..+.+|...|.+++|+|+ +.+||+++.|++|++||+..++... ......+
T Consensus 185 I~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~ 264 (524)
T 2j04_B 185 IQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL 264 (524)
T ss_dssp EEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC
T ss_pred EEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc
Confidence 999997665532 335677889999999997 5799999999999999997764320 0011247
Q ss_pred CccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCC
Q 007283 232 HKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSAN 311 (609)
Q Consensus 232 h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 311 (609)
|.+.|++++|+|++ .|++|+.||+|++||++...
T Consensus 265 h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~--------------------------------------------- 298 (524)
T 2j04_B 265 ADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE--------------------------------------------- 298 (524)
T ss_dssp TTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS---------------------------------------------
T ss_pred CCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC---------------------------------------------
Confidence 88999999999865 89999999999999986210
Q ss_pred CCCCCceeeeCCCCCeEEEE-EecCCC-CEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceE
Q 007283 312 DLEKSPLQLSGHMKNVTALT-VLNIDP-KVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKI 389 (609)
Q Consensus 312 ~~~~~~~~~~~h~~~v~~~~-~~~~~~-~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 389 (609)
.....+.+|...|.+++ .++.++ .+++|++.|++|++|+......... + ..
T Consensus 299 ---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~----------~--------~~------ 351 (524)
T 2j04_B 299 ---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT----------T--------VS------ 351 (524)
T ss_dssp ---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE----------E--------EE------
T ss_pred ---CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc----------c--------cc------
Confidence 01123567999999995 344554 7999999999999998643210000 0 00
Q ss_pred EEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCC
Q 007283 390 WRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDG 469 (609)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg 469 (609)
. .....+.+++++|+++.+++++.|+
T Consensus 352 -----------------------------------------------------~-~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 352 -----------------------------------------------------R-FRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp -----------------------------------------------------E-CSCCSCCCEEEETTTTEEEEECSSS
T ss_pred -----------------------------------------------------c-cccCcccceEeCCCcCeEEEeCCCC
Confidence 0 0001256789999999999999999
Q ss_pred cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEE-eee--cCCCCceEEEEECCCC
Q 007283 470 KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKL-KNM--LYHTARINCLAWSPNN 546 (609)
Q Consensus 470 ~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~--~~h~~~i~~l~~s~d~ 546 (609)
+|++||++.... ...+.+|.+.|++|+|||+|.++++|+.|++|++||+....... +.. ..+...|++++|+|++
T Consensus 378 tv~lwd~~~~~~--~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g 455 (524)
T 2j04_B 378 SLRAVPSRAAFA--VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKD 455 (524)
T ss_dssp EEEEEETTCTTC--CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSS
T ss_pred cEEEEECccccc--ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCC
Confidence 999999987654 34577899999999999999999999999999999975532110 000 0122257899999999
Q ss_pred cEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CC---CeEEEEeCCCcEEEEEccC
Q 007283 547 SMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DE---HSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 547 ~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~---~~l~s~s~D~~i~~W~~~~ 608 (609)
+.+ ....+ +.+|+....+ .....+.+|...|++|+|+ ++ ..+++|+.||.|+||++.-
T Consensus 456 ~~~-~~~~~--~~~~~~~~~g-~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 456 DKY-RIDSS--YEVYPLTVND-VSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CEE-EECCC--CCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred CeE-EccCC--ceecccccCC-cceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 855 23222 3343322111 2344557899999999999 43 3799999999999999864
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.5e-35 Score=291.57 Aligned_cols=206 Identities=25% Similarity=0.384 Sum_probs=177.9
Q ss_pred cccccCCCCcEEEEECCC-CCEEEEEeCCCcEEEEcCCCCc----eeeEEEeecccceeEEEECCCCCEEEEEECCCCcc
Q 007283 51 SIYGEHAYPATVARFSPN-GEWIASADVSGTVRIWGAHNDH----VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKS 125 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~-g~~las~~~d~~i~vWd~~~~~----~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~ 125 (609)
.+|.||++.|++++|+|+ +++||||+.|++|+|||+.+.+ .....+.+|...|.+++|+|||++|++++.+.
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~--- 108 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG--- 108 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS---
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc---
Confidence 458899999999999998 6899999999999999987643 23456788999999999999999999987544
Q ss_pred eEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc-eeeeccCcccceEEEEEcCCC--CE
Q 007283 126 LVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK-FKLSHRGHSNFVNCVRFSPDG--SK 202 (609)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~-~~~~~~~h~~~v~~l~~s~dg--~~ 202 (609)
.+++|.............+...+..+.++|++.. +++|+.|+.+++|+..... ......+|...+.+++|++++ ..
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 4677777777777777888889999999999875 8999999999999976543 445567899999999999875 47
Q ss_pred EEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 203 FISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 203 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+++++.|+.+++||.++++.+..+ .+|.+.|++++|+|++++|++++.|++|++||+.
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNH---IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEEcCCCEEEEEECCCCceeeEe---cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence 889999999999999998877665 3799999999999999999999999999999986
No 50
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-37 Score=317.66 Aligned_cols=199 Identities=13% Similarity=0.236 Sum_probs=152.1
Q ss_pred eecCCCCeEEEeCCCEEEEEeCCCCcccccc-ccCCCCcEEEEECC-CCCEEEEEeCCCcEEEEcCCC---Ccee--eEE
Q 007283 23 SGHPKSNSILYTNGRSVIILDLSNPLQVSIY-GEHAYPATVARFSP-NGEWIASADVSGTVRIWGAHN---DHVL--KKE 95 (609)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~-~~h~~~v~~~~~sp-~g~~las~~~d~~i~vWd~~~---~~~~--~~~ 95 (609)
.++|+++.++... .|+. +++.+..+ .+|.+.|++++|+| +|++||+|+.||+|+|||+.+ +... ...
T Consensus 34 ~f~~~~~~~~~~~-----~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 107 (437)
T 3gre_A 34 EFGPIQEIVRSPN-----MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT 107 (437)
T ss_dssp GGCCCCCCCCCCC-----GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE
T ss_pred hcCCccccccccc-----cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee
Confidence 4678887666543 3664 34555556 89999999999999 999999999999999999876 3311 122
Q ss_pred EeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcC---CCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 96 FRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD---SGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 96 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
+ .|...|.+++|+|++.+|++++.+. .+++|+.+ .+.....+.+| .+..+.|+|++
T Consensus 108 ~-~h~~~v~~~~~~~~~~~l~s~s~dg---~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~--------------- 166 (437)
T 3gre_A 108 Y-DCSSTVTQITMIPNFDAFAVSSKDG---QIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG--------------- 166 (437)
T ss_dssp E-ECSSCEEEEEECTTSSEEEEEETTS---EEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS---------------
T ss_pred c-cCCCCEEEEEEeCCCCEEEEEeCCC---EEEEEEeccccCCceeeccccc--eeEEEEccCcc---------------
Confidence 2 4889999999999999999988644 46777663 34444444444 45555554432
Q ss_pred EeCCCCceeeeccCcccceEEEE--EcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEE
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVR--FSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLT 250 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~--~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s 250 (609)
+...+.++. ++|++.+|++++.|+.|++||.++++.+..+.. ..|.+.|++++|+|++++|++
T Consensus 167 --------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s 231 (437)
T 3gre_A 167 --------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN-SPRHGAVSSICIDEECCVLIL 231 (437)
T ss_dssp --------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC-CGGGCCEEEEEECTTSCEEEE
T ss_pred --------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc-CCCCCceEEEEECCCCCEEEE
Confidence 334466666 678999999999999999999999888776641 128899999999999999999
Q ss_pred EeCCCcEEEeecc
Q 007283 251 ASADKSAKVWDIS 263 (609)
Q Consensus 251 ~s~d~~i~iwd~~ 263 (609)
++.|++|++||++
T Consensus 232 ~~~dg~i~iwd~~ 244 (437)
T 3gre_A 232 GTTRGIIDIWDIR 244 (437)
T ss_dssp EETTSCEEEEETT
T ss_pred EcCCCeEEEEEcC
Confidence 9999999999986
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-35 Score=303.87 Aligned_cols=345 Identities=9% Similarity=0.098 Sum_probs=260.4
Q ss_pred EEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 21 LISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
.++++|+|+.|++.. ++.+.+|++.+.+....+..| ..+....|+|+|++||+++.|++|+|||+.+++.. .
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~----- 133 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR-E----- 133 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE-E-----
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee-e-----
Confidence 678999999988774 689999999888877777766 44556679999999999999999999998765321 1
Q ss_pred ccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc
Q 007283 100 SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK 179 (609)
Q Consensus 100 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~ 179 (609)
.+.+|...|.+++|+|++. .+++|+.|+.+++||....+
T Consensus 134 ----------------------------------------~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 134 ----------------------------------------IDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp ----------------------------------------ETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred ----------------------------------------ecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc
Confidence 1346677777888888776 48889999999999999888
Q ss_pred eeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEE
Q 007283 180 FKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKV 259 (609)
Q Consensus 180 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~i 259 (609)
....+.+|...|.+++|+|++++|++++.|+.+++||.++++.+..+.....|...|.+++|.|.+... +
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----------~ 242 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ----------L 242 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS----------C
T ss_pred CceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce----------e
Confidence 888889999999999999999999999999999999999998887776555678889999988765432 1
Q ss_pred eecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCE
Q 007283 260 WDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKV 339 (609)
Q Consensus 260 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 339 (609)
..... . .+..+ ++ ..++.+
T Consensus 243 ~~~~~---~------------~v~~~---------------------------------------------~~-s~~~~~ 261 (420)
T 3vl1_A 243 HEIST---S------------KKNNL---------------------------------------------EF-GTYGKY 261 (420)
T ss_dssp GGGCC---C------------CCCTT---------------------------------------------CS-SCTTEE
T ss_pred eeccc---C------------cccce---------------------------------------------EE-cCCCCE
Confidence 11100 0 00000 00 123457
Q ss_pred EEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeecc
Q 007283 340 ILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH 419 (609)
Q Consensus 340 ~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (609)
+++++.||.|++|+...... + ..+
T Consensus 262 l~~~~~dg~i~i~d~~~~~~----------~-------------------~~~--------------------------- 285 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQ----------T-------------------IQL--------------------------- 285 (420)
T ss_dssp EEEEETTSCEEEEETTTCCE----------E-------------------EEE---------------------------
T ss_pred EEEEcCCCeEEEEECCCCce----------e-------------------EEc---------------------------
Confidence 78888888888887543210 0 000
Q ss_pred CCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCC-EEEEEeCCCcEEEEEecCCeeeeeEEEec-CCCceEEE
Q 007283 420 YPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGS-EAIIGSQDGKLRVYSIRGDTLTEEAVLEK-HRGAVSVI 497 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~-~l~~gs~dg~i~iw~~~~~~~~~~~~~~~-h~~~i~~v 497 (609)
...+..++.+++++|++. ++++|+.||.|++||++.+... ...+.. |...|.++
T Consensus 286 -----------------------~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~-~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 286 -----------------------PSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP-VGEFLINEGTPINNV 341 (420)
T ss_dssp -----------------------CCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC-SEEEEESTTSCEEEE
T ss_pred -----------------------ccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc-hhhhhccCCCCceEE
Confidence 001124578899999999 9999999999999999865432 234444 77788888
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCceE--------EeeecCCCCceEEEEECCCCc---EEEEEeCCCeEEEEEcCC
Q 007283 498 RYSPDVSMFASGDVNREAIVWDRVSREVK--------LKNMLYHTARINCLAWSPNNS---MVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 498 ~~s~~~~~l~s~s~d~~v~iwd~~~~~~~--------~~~~~~h~~~i~~l~~s~d~~---~l~s~s~D~~v~vw~~~~ 565 (609)
.+ |++.++++++.|+++++||+...+.. ...+..|...|.+++|+|+++ .|++.+.+|.+.+|++..
T Consensus 342 ~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 342 YF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred Ee-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 55 57899999999999999997663211 123557889999999999999 777788899999999853
No 52
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-35 Score=292.53 Aligned_cols=294 Identities=22% Similarity=0.323 Sum_probs=230.6
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc-----eeeeccCcccceEEEEEcCCCCEEEEEeCCCcE
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK-----FKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~-----~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i 212 (609)
..+++||.+.|++++|+|+++.+|+||+.|++|++||....+ ....+.+|...|.+++|+|+|++|++++.|+.+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 457899999999999999876679999999999999965432 345678999999999999999999999999999
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
++|+........... .+...+..+.++|++.+|++++.|+.+++||+... ....
T Consensus 111 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~----~~~~------------------- 164 (340)
T 4aow_A 111 RLWDLTTGTTTRRFV---GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV----CKYT------------------- 164 (340)
T ss_dssp EEEETTTTEEEEEEE---CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC----EEEE-------------------
T ss_pred eEEeecccceeeeec---CCCCceeEEEEeecCccceeecCCCeEEEEEeCCC----ceEE-------------------
Confidence 999988876655442 46778899999999999999999999999997521 1100
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecC-CCCEEEEEecCCcEEEEecCccccceecccccccee
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNI-DPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIK 371 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~ 371 (609)
....+|...+..+++... ...++++++.|+.|++|+........
T Consensus 165 -------------------------~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~---------- 209 (340)
T 4aow_A 165 -------------------------VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT---------- 209 (340)
T ss_dssp -------------------------ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEE----------
T ss_pred -------------------------EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceee----------
Confidence 112357777888887643 34578999999999999764321000
Q ss_pred EeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCcee
Q 007283 372 CFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVT 451 (609)
Q Consensus 372 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (609)
....+..++.
T Consensus 210 ----------------------------------------------------------------------~~~~h~~~v~ 219 (340)
T 4aow_A 210 ----------------------------------------------------------------------NHIGHTGYLN 219 (340)
T ss_dssp ----------------------------------------------------------------------EECCCSSCEE
T ss_pred ----------------------------------------------------------------------EecCCCCcEE
Confidence 0001234688
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe---
Q 007283 452 ASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK--- 528 (609)
Q Consensus 452 ~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~--- 528 (609)
+++++|+++++++|+.||.|++||+...... ..+. +...|.++.|+|++.+++ ++.|+.+++||+.+......
T Consensus 220 ~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~ 295 (340)
T 4aow_A 220 TVTVSPDGSLCASGGKDGQAMLWDLNEGKHL--YTLD-GGDIINALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQ 295 (340)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEETTTTEEE--EEEE-CSSCEEEEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEeccCcee--eeec-CCceEEeeecCCCCceee-ccCCCEEEEEECCCCeEEEeccc
Confidence 9999999999999999999999999876543 3333 456899999999987655 56799999999876543211
Q ss_pred -----eecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 529 -----NMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 529 -----~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
....|...|++++|+||+++|++|+.||+|+|||+.++
T Consensus 296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 296 EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 13468899999999999999999999999999998764
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.6e-36 Score=302.07 Aligned_cols=297 Identities=13% Similarity=0.083 Sum_probs=206.7
Q ss_pred CCCcEEEEECCCCCEEEEEeCCC-------cEEEEcCCCCcee-----e----EEEeecccceeEEEECCCCCEEEEEEC
Q 007283 57 AYPATVARFSPNGEWIASADVSG-------TVRIWGAHNDHVL-----K----KEFRVLSGRIDDLQWSPDGLRIVACGD 120 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~d~-------~i~vWd~~~~~~~-----~----~~~~~~~~~v~~~~~spdg~~l~~~~~ 120 (609)
..||++++|+|||++||+|+.|. .|+||++...... . ..+..+...|.+++| ++..+++..+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC
Confidence 45899999999999999987654 4999998754310 0 112233334444433 3333333221
Q ss_pred CCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee---------eeccCcccce
Q 007283 121 GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK---------LSHRGHSNFV 191 (609)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~---------~~~~~h~~~v 191 (609)
.. ...+++++.|..+++|+....... .....+..++
T Consensus 92 ~~-----------------------------------~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (365)
T 4h5i_A 92 EN-----------------------------------STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYT 136 (365)
T ss_dssp CC-----------------------------------HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCE
T ss_pred CC-----------------------------------ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCE
Confidence 10 112344555666777764332111 1123455678
Q ss_pred EEEEEcCCCCEEEEEe--CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCc
Q 007283 192 NCVRFSPDGSKFISVS--SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGK 269 (609)
Q Consensus 192 ~~l~~s~dg~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~ 269 (609)
.+++|+|||+++++|+ .|++|+|||.++++.+..+ .|.+.|.+++|+|||++|++++.+ .+++|+... ++
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~----~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~---~~ 208 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI----ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVT---GS 208 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE----ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTT---CC
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe----CCCCceEEEEEccCCceEEeccce-eEEEEEecc---Cc
Confidence 9999999999887655 6899999999999887766 477889999999999999999855 556665431 11
Q ss_pred eEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcE
Q 007283 270 LKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLI 349 (609)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i 349 (609)
.... ....+|..
T Consensus 209 ~~~~--------------------------------------------~~~~~~~~------------------------ 220 (365)
T 4h5i_A 209 CIAR--------------------------------------------KTDFDKNW------------------------ 220 (365)
T ss_dssp EEEE--------------------------------------------ECCCCTTE------------------------
T ss_pred ceee--------------------------------------------eecCCCCC------------------------
Confidence 0000 00001111
Q ss_pred EEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEec
Q 007283 350 VKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTD 429 (609)
Q Consensus 350 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (609)
T Consensus 221 -------------------------------------------------------------------------------- 220 (365)
T 4h5i_A 221 -------------------------------------------------------------------------------- 220 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCC----cEEEEEecCCeee--eeEEEecCCCceEEEEECCCC
Q 007283 430 SGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDG----KLRVYSIRGDTLT--EEAVLEKHRGAVSVIRYSPDV 503 (609)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg----~i~iw~~~~~~~~--~~~~~~~h~~~i~~v~~s~~~ 503 (609)
.+.+++|+|+++.+++++.|+ .+++|++...... ....+.+|...|++++|||||
T Consensus 221 -------------------~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 221 -------------------SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp -------------------EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred -------------------CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 245566777888888877776 5777877655432 234577899999999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 504 SMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 504 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
++||+|+.|++|+|||+.+.+.....+.+|...|++|+|||||++|||||.|++|+||+++.
T Consensus 282 ~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 282 ELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999999887654444578999999999999999999999999999999964
No 54
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-34 Score=300.87 Aligned_cols=347 Identities=18% Similarity=0.262 Sum_probs=264.8
Q ss_pred eeEEEecCCccE-EEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 007283 137 NVGEFDGHSRRV-LSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIY 215 (609)
Q Consensus 137 ~~~~~~~h~~~v-~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iw 215 (609)
....+.+|...| .++.++ +. .+++|+.|+.|++||..+++....+.+|...|.+++|+|++ .|++|+.|+++++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~~--~~-~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFE--DN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEEC--CC-EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 345788998875 555554 44 59999999999999999999999999999999999999998 89999999999999
Q ss_pred eCCCCccccccCcCCCCccceEEEEEC--CCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcC
Q 007283 216 DGKTADKIGELSPEDGHKGSVYAVSWS--PDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQN 293 (609)
Q Consensus 216 d~~~~~~~~~~~~~~~h~~~V~~l~~s--pd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (609)
|..+++.+..+ .+|.+.|.+++|+ |++.+|++++.|++|++||+..... ......... .
T Consensus 189 d~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~---~~~~~~~~~----~--------- 249 (464)
T 3v7d_B 189 DIKKGCCTHVF---EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS---VPDHGEEHD----Y--------- 249 (464)
T ss_dssp ETTTTEEEEEE---CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCC---C------CC----S---------
T ss_pred ECCCCcEEEEE---CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcc---cccccccCC----c---------
Confidence 99999877766 3799999999998 5789999999999999999874221 111100000 0
Q ss_pred CeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEe
Q 007283 294 DFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCF 373 (609)
Q Consensus 294 ~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~ 373 (609)
................+.+|...|.++.. ++..+++++.|+.|++|+......
T Consensus 250 ----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~-------------- 302 (464)
T 3v7d_B 250 ----------PLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKC-------------- 302 (464)
T ss_dssp ----------SEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEE--------------
T ss_pred ----------ceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcE--------------
Confidence 00000000011112346788888888754 347999999999999997643210
Q ss_pred eeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEE
Q 007283 374 AAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTAS 453 (609)
Q Consensus 374 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (609)
+.. ...+...+.++
T Consensus 303 ---------------~~~---------------------------------------------------~~~~~~~v~~~ 316 (464)
T 3v7d_B 303 ---------------LYI---------------------------------------------------LSGHTDRIYST 316 (464)
T ss_dssp ---------------EEE---------------------------------------------------ECCCSSCEEEE
T ss_pred ---------------EEE---------------------------------------------------ecCCCCCEEEE
Confidence 000 00122457889
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCC
Q 007283 454 AIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYH 533 (609)
Q Consensus 454 ~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h 533 (609)
+++|+++++++|+.||.|++||+.++.. ...+.+|...|.+++|+ +.++++++.|+++++||+.+...... ..|
T Consensus 317 ~~~~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~--~~~ 390 (464)
T 3v7d_B 317 IYDHERKRCISASMDTTIRIWDLENGEL--MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS--YHH 390 (464)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE--EEC
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcE--EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee--ecC
Confidence 9999999999999999999999987764 45678999999999997 58999999999999999987654432 246
Q ss_pred CCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEeCCCcEEEEEcc
Q 007283 534 TARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 534 ~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~D~~i~~W~~~ 607 (609)
...+..++|+|++++|++|+ |+.|++||+..+. .......+|.+.|++++|+++..+++++.|+.+.+|-++
T Consensus 391 ~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~-~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 391 TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK-LVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC-EEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCc-EEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEee
Confidence 77888999999999999999 9999999998653 222234678999999999866677778888888777654
No 55
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-37 Score=315.15 Aligned_cols=318 Identities=10% Similarity=0.099 Sum_probs=240.8
Q ss_pred CCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC
Q 007283 57 AYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT 136 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 136 (609)
++.|.+++|||||++|||++.|++|| |....+. +.+|...|..++|+||| .+ +.|.++.+.
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~----l~gh~~~v~~V~FsPdg------~~-------~~~~~~~~~ 75 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD----INCNSKNLFHVKEFPLE------FE-------NKLDFELAQ 75 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC----CSSBGGGTEEEEEECCC------CC-------CTTTTSCCC
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccce----ecCCCccEEEEEECCCC------Cc-------ceEEEEeCC
Confidence 46799999999999999999999999 7555432 36899999999999999 11 123444333
Q ss_pred eeEEEe-cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCccc-----ceEEEEEcCCCCEEEEEeCCC
Q 007283 137 NVGEFD-GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSN-----FVNCVRFSPDGSKFISVSSDK 210 (609)
Q Consensus 137 ~~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~-----~v~~l~~s~dg~~l~s~~~d~ 210 (609)
....+. .|...|.+++|+|+|.. +|+++.|+.+++|+... +...+. |.. .|.+++|||||++||+|+.||
T Consensus 76 ~~~~~~~~~~~~V~~vawSPdG~~-LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 76 QNGLLNSQPVCYPRVCKPSPIDDW-MAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp SSCSSTTSCSCCEEEEEECSSSSC-EEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred CceEeecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence 222233 56888999999999985 99999999999999654 444445 554 599999999999999999999
Q ss_pred cEEEEeCCCCcc-------ccccC-cCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCc
Q 007283 211 KGIIYDGKTADK-------IGELS-PEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGV 282 (609)
Q Consensus 211 ~i~iwd~~~~~~-------~~~~~-~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 282 (609)
+|+|||..+++. +.++. ...+|.+.|.+++|+||| +++++.|+++++||+.... ..
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~---~~----------- 215 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASS---HQ----------- 215 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSS---SC-----------
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCc---cc-----------
Confidence 999999988753 22321 124788999999999999 8888999999999986321 00
Q ss_pred cceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceee-eCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccce
Q 007283 283 DDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQL-SGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGK 361 (609)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~ 361 (609)
.....+ .+|...|.+++|+ ++.+++++ |++|++|+...+....
T Consensus 216 --------------------------------~~~~tL~~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~ 259 (588)
T 2j04_A 216 --------------------------------PVSRMIQNASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISS 259 (588)
T ss_dssp --------------------------------CCEEEEECCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEE
T ss_pred --------------------------------cceeeecccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEE
Confidence 001123 3677889999998 26888887 6999999764321000
Q ss_pred eccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeee
Q 007283 362 LQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVV 441 (609)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (609)
T Consensus 260 -------------------------------------------------------------------------------- 259 (588)
T 2j04_A 260 -------------------------------------------------------------------------------- 259 (588)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeccCCceeEEEE--cCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q 007283 442 STINLRFPVTASAI--APDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWD 519 (609)
Q Consensus 442 ~~~~~~~~~~~~~~--sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd 519 (609)
....+...+..+++ +||+..+++++.||+ ++|..+ .++|+||+..+++. |+++++|+
T Consensus 260 ~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d------------------~~~~spd~~l~a~~--d~~v~lW~ 318 (588)
T 2j04_A 260 LKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED------------------ELHVTADNIIAPYL--EKKFKKWS 318 (588)
T ss_dssp EECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS------------------SEEEECCCSSHHHH--HHHHHHTT
T ss_pred EEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec------------------cEEECCCceEEEEc--CCEEEEEE
Confidence 00012245788899 999999999999999 999764 15689999999885 99999998
Q ss_pred ccCCceEEeeecCCCCceEEEEECCCCcEEEEEe
Q 007283 520 RVSREVKLKNMLYHTARINCLAWSPNNSMVATGS 553 (609)
Q Consensus 520 ~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s 553 (609)
...+.. . ...++..|.+++|||||+.+|+++
T Consensus 319 ~~g~~l--~-~~~~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 319 TIWNEF--N-NYETTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp TTTTSS--S-SSCCEEEEEEEEECTTSSEEEEEE
T ss_pred CCCCce--e-eeccceEEEEEEECCCCCEEEEEE
Confidence 765542 2 223477799999999999999885
No 56
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-34 Score=285.46 Aligned_cols=300 Identities=17% Similarity=0.234 Sum_probs=246.2
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDG 217 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~ 217 (609)
...+.+|...|.+++|+|++.. +++|+.|+.+++|+..+++....+.+|...|.+++|+|++++|++++.|+.+++||.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDL-LFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCE-EEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCCCE-EEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 3467899999999999999874 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCcCCCCccceEEEEECCCCCeEEEEeCC-----CcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 218 KTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASAD-----KSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 218 ~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
.+++.+..+. |...|.+++|+|++++|++++.+ +.|++||+...........
T Consensus 104 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------------------- 160 (369)
T 3zwl_B 104 SNGQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------------------- 160 (369)
T ss_dssp TTCCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE-------------------
T ss_pred CCCcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc-------------------
Confidence 9998877663 77889999999999999999998 9999999753110000000
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
.....+..+.
T Consensus 161 -----------------------------~~~~~~~~~~----------------------------------------- 170 (369)
T 3zwl_B 161 -----------------------------VSEEPIHKII----------------------------------------- 170 (369)
T ss_dssp -----------------------------ECSSCSEEEE-----------------------------------------
T ss_pred -----------------------------cccceeeecc-----------------------------------------
Confidence 0000000000
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeE
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTA 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (609)
.......+.+
T Consensus 171 ----------------------------------------------------------------------~~~~~~~~~~ 180 (369)
T 3zwl_B 171 ----------------------------------------------------------------------THEGLDAATV 180 (369)
T ss_dssp ----------------------------------------------------------------------CCTTCCCEEE
T ss_pred ----------------------------------------------------------------------CCcCccceeE
Confidence 0000014678
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecC-CeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeec
Q 007283 453 SAIAPDGSEAIIGSQDGKLRVYSIRG-DTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNML 531 (609)
Q Consensus 453 ~~~sp~g~~l~~gs~dg~i~iw~~~~-~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 531 (609)
++++|+++++++|+.||.|++||+.. ... ...+..|...|.+++|+|++.++++++.|+.+++||+.+.+.... +
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~- 256 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEY--VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK-Y- 256 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEE--EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-E-
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEe--EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee-e-
Confidence 88999999999999999999999986 333 456788999999999999999999999999999999887655332 2
Q ss_pred CCCCceEEEEECCCCcEEEEEeCCC--------------eEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEe
Q 007283 532 YHTARINCLAWSPNNSMVATGSLDT--------------CVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSG 596 (609)
Q Consensus 532 ~h~~~i~~l~~s~d~~~l~s~s~D~--------------~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s 596 (609)
.+...+.+++|+|+++++++++.++ .|++||..... ......+|...|++++|+ ++++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 257 ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp ECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecccCcEEEEEECCCCCEEEEEc
Confidence 3788999999999999999999998 89999987643 345557899999999999 778999999
Q ss_pred CCCcEEEEEcc
Q 007283 597 EDACVRVWRLT 607 (609)
Q Consensus 597 ~D~~i~~W~~~ 607 (609)
.|+.|++|++.
T Consensus 335 ~dg~v~iw~~~ 345 (369)
T 3zwl_B 335 EDGFIRLHHFE 345 (369)
T ss_dssp TTSEEEEEEEC
T ss_pred CCCeEEEEECc
Confidence 99999999985
No 57
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.9e-34 Score=294.49 Aligned_cols=321 Identities=19% Similarity=0.331 Sum_probs=242.0
Q ss_pred cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEE
Q 007283 49 QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVR 128 (609)
Q Consensus 49 ~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 128 (609)
....+.+|.+.|.. +++++|++||+|+.||+|++||+.+++. ...+..|.+.|.+++|+ +..|++++.+. .++
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~--~~~l~s~~~dg---~i~ 182 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC-LRTLVGHTGGVWSSQMR--DNIIISGSTDR---TLK 182 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE-EEECCCCSSCEEEEEEE--TTEEEEEETTS---CEE
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcE-EEEEcCCCCCEEEEEec--CCEEEEEeCCC---eEE
Confidence 44567899987643 3666799999999999999999988764 34577888888888887 44677666443 467
Q ss_pred EEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeC
Q 007283 129 AFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSS 208 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 208 (609)
+|+++.+..+..+.+|...|.+++|+++ .+++|+.|+.+++||..+++....+.+|...|.++.| +++.|++++.
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~~~---~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 257 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY 257 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET
T ss_pred EEECCcCcEEEEECCCCCcEEEEEecCC---EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC
Confidence 7777777778888888888888888642 4888888888888888888777778888888888888 6778888888
Q ss_pred CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEE
Q 007283 209 DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVG 288 (609)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (609)
|+.+++||..+++.+..+ .+|...|.++.| ++.++++++.|+.|++||+.. ++...
T Consensus 258 dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~---~~~~~---------------- 313 (445)
T 2ovr_B 258 DFMVKVWDPETETCLHTL---QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET---GNCIH---------------- 313 (445)
T ss_dssp TSCEEEEEGGGTEEEEEE---CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT---CCEEE----------------
T ss_pred CCEEEEEECCCCcEeEEe---cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC---CCEEE----------------
Confidence 888888888877766655 367788888888 778888888888888888752 11110
Q ss_pred EEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccccc
Q 007283 289 CLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENS 368 (609)
Q Consensus 289 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~ 368 (609)
.+.+|...+.++
T Consensus 314 ------------------------------~~~~~~~~v~~~-------------------------------------- 325 (445)
T 2ovr_B 314 ------------------------------TLTGHQSLTSGM-------------------------------------- 325 (445)
T ss_dssp ------------------------------EECCCCSCEEEE--------------------------------------
T ss_pred ------------------------------EEcCCcccEEEE--------------------------------------
Confidence 111222222211
Q ss_pred ceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCC
Q 007283 369 QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRF 448 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (609)
T Consensus 326 -------------------------------------------------------------------------------- 325 (445)
T 2ovr_B 326 -------------------------------------------------------------------------------- 325 (445)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEec---CCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q 007283 449 PVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEK---HRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREV 525 (609)
Q Consensus 449 ~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~---h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~ 525 (609)
.+++.++++|+.||.|++||+.++.. ...+.. |...|.+++|+ +.++++|+.|++|++||+.+++.
T Consensus 326 -------~~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 326 -------ELKDNILVSGNADSTVKIWDIKTGQC--LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp -------EEETTEEEEEETTSCEEEEETTTCCE--EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred -------EEeCCEEEEEeCCCeEEEEECCCCcE--EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 12345677777777777777765543 233443 88899999995 68999999999999999987765
Q ss_pred EEeee-----cCCCCceEEEEECCCCcEEEEEeCCCe----EEEEEcCC
Q 007283 526 KLKNM-----LYHTARINCLAWSPNNSMVATGSLDTC----VIIYEIDK 565 (609)
Q Consensus 526 ~~~~~-----~~h~~~i~~l~~s~d~~~l~s~s~D~~----v~vw~~~~ 565 (609)
.. .+ ..|...|++++|+|++.+||+|+.||+ |.|||++.
T Consensus 395 ~~-~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 395 IR-NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EE-EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ee-eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 33 23 367889999999999999999999998 99999874
No 58
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-34 Score=314.81 Aligned_cols=292 Identities=22% Similarity=0.291 Sum_probs=231.1
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC-----ceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF-----KFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~-----~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
..+.+|.+.|.+++|+|++..++++|+.|+.|++|+.... .....+.+|...|.+++|+|+|++|++|+.|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4678999999999999988778999999999999987542 33456789999999999999999999999999999
Q ss_pred EEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcC
Q 007283 214 IYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQN 293 (609)
Q Consensus 214 iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (609)
|||..++..+..+ .+|.+.|.+++|+|++++|++++.|++|++||... .....+.
T Consensus 456 vwd~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~----~~~~~~~------------------ 510 (694)
T 3dm0_A 456 LWDLAAGVSTRRF---VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG----ECKYTIS------------------ 510 (694)
T ss_dssp EEETTTTEEEEEE---ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS----CEEEEEC------------------
T ss_pred EEECCCCcceeEE---eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC----Ccceeec------------------
Confidence 9999998877665 37999999999999999999999999999999742 1111110
Q ss_pred CeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCC-CCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 294 DFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNID-PKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 294 ~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
....+|...|.++++++.. ...+++++.|++|++|+...... .
T Consensus 511 ------------------------~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~----------~-- 554 (694)
T 3dm0_A 511 ------------------------EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL----------R-- 554 (694)
T ss_dssp ------------------------SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE----------E--
T ss_pred ------------------------cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE----------E--
Confidence 0123588889999988543 35899999999999997643110 0
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeE
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTA 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (609)
. ....+...+.+
T Consensus 555 -----------------~---------------------------------------------------~~~~h~~~v~~ 566 (694)
T 3dm0_A 555 -----------------S---------------------------------------------------TLAGHTGYVST 566 (694)
T ss_dssp -----------------E---------------------------------------------------EECCCSSCEEE
T ss_pred -----------------E---------------------------------------------------EEcCCCCCEEE
Confidence 0 00012345889
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecC
Q 007283 453 SAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY 532 (609)
Q Consensus 453 ~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~ 532 (609)
++++|+|+++++|+.||+|++||+..+... ..+ .+...|.+++|+|++.++++++ |+.|++||+.+...... +..
T Consensus 567 v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~--~~~-~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~-~~~ 641 (694)
T 3dm0_A 567 VAVSPDGSLCASGGKDGVVLLWDLAEGKKL--YSL-EANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVED-LKV 641 (694)
T ss_dssp EEECTTSSEEEEEETTSBCEEEETTTTEEE--ECC-BCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEE-ECC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCceE--EEe-cCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhh-hcc
Confidence 999999999999999999999999877542 223 3556899999999999888765 56799999887654321 111
Q ss_pred -------------------CCCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 533 -------------------HTARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 533 -------------------h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
+...+++++||||+++|++|+.||+|++|++.
T Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 642 DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp CCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 11247899999999999999999999999985
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.1e-34 Score=291.90 Aligned_cols=311 Identities=17% Similarity=0.180 Sum_probs=228.2
Q ss_pred EecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc--eeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 007283 141 FDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK--FKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK 218 (609)
Q Consensus 141 ~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~ 218 (609)
+..|..+|.+++|+|++.. +++++.|+.+++|+....+ ....+.+|...|.+++|+|++++|++++.|+.+++||..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~-l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQ-IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSE-EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCE-EEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 4568899999999999984 8999999999999988776 777788999999999999999999999999999999998
Q ss_pred CCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEE
Q 007283 219 TADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVI 298 (609)
Q Consensus 219 ~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (609)
+++...... ..+|...|.+++|+|++++|++++.|+.|++||+..........
T Consensus 83 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~-------------------------- 135 (372)
T 1k8k_C 83 GRTWKPTLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCK-------------------------- 135 (372)
T ss_dssp TTEEEEEEE-CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEE--------------------------
T ss_pred CCeeeeeEE-eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeee--------------------------
Confidence 776443332 23688999999999999999999999999999986321000000
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCC
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE 378 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
....+|...|.++++++ ++.++++++.||.|++|+...... .
T Consensus 136 -------------------~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~--------~---------- 177 (372)
T 1k8k_C 136 -------------------HIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEV--------E---------- 177 (372)
T ss_dssp -------------------EECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTT--------S----------
T ss_pred -------------------eeecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccc--------c----------
Confidence 00123445555555543 234555555555555554321000 0
Q ss_pred cEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC
Q 007283 379 EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD 458 (609)
Q Consensus 379 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 458 (609)
... . -.+-
T Consensus 178 ----------------------------------------------------------~~~--------~------~~~~ 185 (372)
T 1k8k_C 178 ----------------------------------------------------------ERP--------A------PTPW 185 (372)
T ss_dssp ----------------------------------------------------------CCC--------C------CBTT
T ss_pred ----------------------------------------------------------ccc--------c------cccc
Confidence 000 0 0000
Q ss_pred CCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceE
Q 007283 459 GSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARIN 538 (609)
Q Consensus 459 g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~ 538 (609)
+. +...+.. ...+.+|.+.|.+++|+|++.++++++.|+.+++||+.+.+. +..+..|...|+
T Consensus 186 ~~--------------~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~ 248 (372)
T 1k8k_C 186 GS--------------KMPFGEL--MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA-VATLASETLPLL 248 (372)
T ss_dssp BS--------------CCCTTCE--EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE-EEEEECSSCCEE
T ss_pred cc--------------ccchhhh--eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCce-eEEEccCCCCeE
Confidence 00 0111222 345568999999999999999999999999999999987664 445678999999
Q ss_pred EEEECCCCcEEEEEeCCCeEEEEEcCC--CCC------------------------------cc-------eeEeccccC
Q 007283 539 CLAWSPNNSMVATGSLDTCVIIYEIDK--PAS------------------------------SR-------MTIKGAHLG 579 (609)
Q Consensus 539 ~l~~s~d~~~l~s~s~D~~v~vw~~~~--~~~------------------------------~~-------~~~~~~h~~ 579 (609)
+++|+|++++|++| .|+.|++|++.. +.. .. ..+..+|..
T Consensus 249 ~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 327 (372)
T 1k8k_C 249 AVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKN 327 (372)
T ss_dssp EEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSS
T ss_pred EEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccC
Confidence 99999999999888 999999999975 210 00 223358999
Q ss_pred CeEEEEEc-CC----CeEEEEeCCCcEEEEEcc
Q 007283 580 GVYGLAFT-DE----HSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 580 ~v~~~~~s-~~----~~l~s~s~D~~i~~W~~~ 607 (609)
.|++++|. ++ .+|+|+|.||+|++|++.
T Consensus 328 ~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 328 SVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred CcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 99999965 44 799999999999999984
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-34 Score=313.41 Aligned_cols=296 Identities=21% Similarity=0.297 Sum_probs=230.4
Q ss_pred ccccCCCCcEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEE
Q 007283 52 IYGEHAYPATVARFSPNG-EWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAF 130 (609)
Q Consensus 52 ~~~~h~~~v~~~~~sp~g-~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~ 130 (609)
.+.+|.+.|++++|+|++ ++|+||+.|++|+||++.+.....
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~------------------------------------- 419 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY------------------------------------- 419 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS-------------------------------------
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc-------------------------------------
Confidence 477999999999999875 799999999999999986542100
Q ss_pred EcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCC
Q 007283 131 MWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDK 210 (609)
Q Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~ 210 (609)
+.....+.+|...|.+++|+|++.. +++|+.|+.|++||..+++....+.+|...|.+++|+|++++|++++.|+
T Consensus 420 ----~~~~~~~~~h~~~v~~v~~s~~g~~-l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 420 ----GVAQRRLTGHSHFVEDVVLSSDGQF-ALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp ----CEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred ----ccccceecCCCCcEEEEEECCCCCE-EEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 0011246688889999999998874 89999999999999999988889999999999999999999999999999
Q ss_pred cEEEEeCCCCccccccCcCCCCccceEEEEECCCC--CeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEE
Q 007283 211 KGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDG--KQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVG 288 (609)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (609)
+|++||..............+|...|.+++|+|++ .+|++++.|++|++||++. .+..
T Consensus 495 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~---~~~~----------------- 554 (694)
T 3dm0_A 495 TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN---CKLR----------------- 554 (694)
T ss_dssp CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---CCEE-----------------
T ss_pred EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---CcEE-----------------
Confidence 99999976554333222235799999999999987 5799999999999999862 1111
Q ss_pred EEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccccc
Q 007283 289 CLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENS 368 (609)
Q Consensus 289 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~ 368 (609)
..+.+|...|.++++++ ++.++++++.||+|++|+...+..
T Consensus 555 -----------------------------~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~--------- 595 (694)
T 3dm0_A 555 -----------------------------STLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKK--------- 595 (694)
T ss_dssp -----------------------------EEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEE---------
T ss_pred -----------------------------EEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCce---------
Confidence 23457889999999875 567999999999999998643210
Q ss_pred ceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCC
Q 007283 369 QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRF 448 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (609)
+..+....
T Consensus 596 ------------------------------------------------------------------------~~~~~~~~ 603 (694)
T 3dm0_A 596 ------------------------------------------------------------------------LYSLEANS 603 (694)
T ss_dssp ------------------------------------------------------------------------EECCBCSS
T ss_pred ------------------------------------------------------------------------EEEecCCC
Confidence 00001113
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEE-----------------ecCCCceEEEEECCCCCEEEEEeC
Q 007283 449 PVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVL-----------------EKHRGAVSVIRYSPDVSMFASGDV 511 (609)
Q Consensus 449 ~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~-----------------~~h~~~i~~v~~s~~~~~l~s~s~ 511 (609)
.+.+++++|++.++++++ |+.|++||++++.+...... ..+...+++++|||||++|++|+.
T Consensus 604 ~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~ 682 (694)
T 3dm0_A 604 VIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYT 682 (694)
T ss_dssp CEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcC
Confidence 477889999999888776 56699999987765322110 111224789999999999999999
Q ss_pred CCeEEEEEcc
Q 007283 512 NREAIVWDRV 521 (609)
Q Consensus 512 d~~v~iwd~~ 521 (609)
|++|++||+.
T Consensus 683 Dg~i~iW~i~ 692 (694)
T 3dm0_A 683 DGVIRVWGIG 692 (694)
T ss_dssp TSEEEEEEC-
T ss_pred CCeEEEEecc
Confidence 9999999964
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-36 Score=313.34 Aligned_cols=184 Identities=10% Similarity=0.073 Sum_probs=144.0
Q ss_pred EEEEeCCCcEEEEcCCCCcee---eEEEeecccceeEEEECCC------CCEEEEEECCCCcceEEEEEcCCCCe-----
Q 007283 72 IASADVSGTVRIWGAHNDHVL---KKEFRVLSGRIDDLQWSPD------GLRIVACGDGKGKSLVRAFMWDSGTN----- 137 (609)
Q Consensus 72 las~~~d~~i~vWd~~~~~~~---~~~~~~~~~~v~~~~~spd------g~~l~~~~~~~~~~~~~~~~~~~~~~----- 137 (609)
+||++.|++|+||++.+++.. ...+..|.+.|..++|+|+ +.+|++++.+. .+++|+...+..
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg---tvrlWd~~~~~~~~~~~ 252 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEG---TINFLEIIDNATDVHVF 252 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTS---CEEEEECCCCSSSSSEE
T ss_pred hccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCC---eEEEEEcCCCccccccc
Confidence 344567899999999876532 1235567788999999997 56888877644 478888765431
Q ss_pred ------eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc-eeeeccCcccceEEE--EEcCCC-CEEEEEe
Q 007283 138 ------VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK-FKLSHRGHSNFVNCV--RFSPDG-SKFISVS 207 (609)
Q Consensus 138 ------~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~-~~~~~~~h~~~v~~l--~~s~dg-~~l~s~~ 207 (609)
...+.+|...|.+++|+|++ .|++|+.|++|++||..... ....+.+|...|.++ .|+|+| .+||+|+
T Consensus 253 ~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S 330 (524)
T 2j04_B 253 KMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA 330 (524)
T ss_dssp ECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEE
T ss_pred eeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEec
Confidence 24678999999999999864 59999999999999987653 344578999999999 578888 8999999
Q ss_pred CCCcEEEEeCCCCccccccCcCCCCc--cceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 208 SDKKGIIYDGKTADKIGELSPEDGHK--GSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~~~~~h~--~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.|++++|||.++++....+. +|. ..|.+++|+|+++.+++++.|++|++||++
T Consensus 331 ~D~tvklWD~~~~~~~~~~~---~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~ 385 (524)
T 2j04_B 331 VDGYFYIFNPKDIATTKTTV---SRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSR 385 (524)
T ss_dssp TTSEEEEECGGGHHHHCEEE---EECSCCSCCCEEEETTTTEEEEECSSSEEEEEETT
T ss_pred cCCeEEEEECCCCCcccccc---cccccCcccceEeCCCcCeEEEeCCCCcEEEEECc
Confidence 99999999998877665442 444 258899999999999999999999999975
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.1e-35 Score=294.55 Aligned_cols=208 Identities=13% Similarity=0.138 Sum_probs=173.5
Q ss_pred CCccccccccCCCCcEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceeeEEE--eecccceeEEEECC-CCCEEEEEECC
Q 007283 46 NPLQVSIYGEHAYPATVARFSPNG-EWIASADVSGTVRIWGAHNDHVLKKEF--RVLSGRIDDLQWSP-DGLRIVACGDG 121 (609)
Q Consensus 46 ~~~~~~~~~~h~~~v~~~~~sp~g-~~las~~~d~~i~vWd~~~~~~~~~~~--~~~~~~v~~~~~sp-dg~~l~~~~~~ 121 (609)
.......+.+|.+.|++++|+|+| ++||+|+.|++|+|||+.+++... .+ ..|...|.+++|+| ++.+|++++.+
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-EECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-eeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 334445678999999999999999 999999999999999998766432 23 35889999999999 67788877654
Q ss_pred CCcceEEEEEcCCCCeeEEEecC---CccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcC
Q 007283 122 KGKSLVRAFMWDSGTNVGEFDGH---SRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSP 198 (609)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 198 (609)
. .+++|+.+. ..+..+..| ...|.+++|+|++.. +++|+.|+.+++||. ..+....+.+|...|.+++|+|
T Consensus 141 ~---~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 141 G---ATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp T---EEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECS
T ss_pred C---EEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECC
Confidence 3 467777764 455555544 478999999999984 999999999999998 4667778889999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEeCCCC----ccccccCcCCCCccceEEEEECC-CCCeEEEEeCCCcEEEeeccc
Q 007283 199 DGS-KFISVSSDKKGIIYDGKTA----DKIGELSPEDGHKGSVYAVSWSP-DGKQVLTASADKSAKVWDISE 264 (609)
Q Consensus 199 dg~-~l~s~~~d~~i~iwd~~~~----~~~~~~~~~~~h~~~V~~l~~sp-d~~~l~s~s~d~~i~iwd~~~ 264 (609)
+++ +|++++.|+.+++||..+. ..+..+ +|.+.|.+++|+| ++++|++++.|+.|++||+..
T Consensus 215 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 215 RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 999 9999999999999998873 333333 5889999999999 999999999999999999863
No 63
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=286.13 Aligned_cols=297 Identities=18% Similarity=0.259 Sum_probs=230.7
Q ss_pred EEecCCccEEEEEEeeCCCeEEEEecC---CCeEEEEeCCCCceeee-ccCcccceEEEEEcCC---CCEEEEEeCCCcE
Q 007283 140 EFDGHSRRVLSCAFKPSRPFRIATCGE---DFLVNFYEGPPFKFKLS-HRGHSNFVNCVRFSPD---GSKFISVSSDKKG 212 (609)
Q Consensus 140 ~~~~h~~~v~~~~~~p~~~~~i~t~~~---d~~i~~~~~~~~~~~~~-~~~h~~~v~~l~~s~d---g~~l~s~~~d~~i 212 (609)
.+.+|...|.+++|+|++..++++|+. |+.+++|+....+.... ..+|...|.+++|+|+ |++|++++.|+.+
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 457899999999999999877888887 99999999887765543 3479999999999999 6999999999999
Q ss_pred EEEeCCCCc-cccccCcCCCCccceEEEE------ECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccce
Q 007283 213 IIYDGKTAD-KIGELSPEDGHKGSVYAVS------WSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDM 285 (609)
Q Consensus 213 ~iwd~~~~~-~~~~~~~~~~h~~~V~~l~------~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 285 (609)
++||..+++ .+..+ .+|.+.|.++. |+|++++|++++.|+.|++||+.... .....+...
T Consensus 93 ~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~~-------- 159 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSV---KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD--DPVANMEPV-------- 159 (357)
T ss_dssp EEECTTSCSSCSEEE---CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS--SCSEEECCC--------
T ss_pred EEEeCCCCCccEEEE---EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC--Ccceecccc--------
Confidence 999999887 55544 47999999995 57899999999999999999986421 111111100
Q ss_pred EEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeC-CCCCeEEEEEe---cCCCCEEEEEecCCcEEEEecCccccce
Q 007283 286 LVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSG-HMKNVTALTVL---NIDPKVILSSSYDGLIVKWIQGIGYGGK 361 (609)
Q Consensus 286 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~~---~~~~~~~~t~s~dg~i~~W~~~~~~~~~ 361 (609)
.+ +...+.++++. ..++.++++++.|+.|++|+......
T Consensus 160 -----------------------------------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-- 202 (357)
T 3i2n_A 160 -----------------------------------QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-- 202 (357)
T ss_dssp -----------------------------------TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE--
T ss_pred -----------------------------------CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce--
Confidence 01 12356666642 34568999999999999997643210
Q ss_pred eccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeee
Q 007283 362 LQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVV 441 (609)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (609)
.
T Consensus 203 -------------------------------------------------------------------------------~ 203 (357)
T 3i2n_A 203 -------------------------------------------------------------------------------R 203 (357)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------e
Confidence 0
Q ss_pred EEeccCCceeEEEEcC---CCCEEEEEeCCCcEEEEEecCCeeeee---EEEecCCCceEEEEECCCCC-EEEEEeCCCe
Q 007283 442 STINLRFPVTASAIAP---DGSEAIIGSQDGKLRVYSIRGDTLTEE---AVLEKHRGAVSVIRYSPDVS-MFASGDVNRE 514 (609)
Q Consensus 442 ~~~~~~~~~~~~~~sp---~g~~l~~gs~dg~i~iw~~~~~~~~~~---~~~~~h~~~i~~v~~s~~~~-~l~s~s~d~~ 514 (609)
....+..++.+++++| ++.++++|+.||.|++|+++.+..... ..+.+|...|.+++|+|++. ++++++.|+.
T Consensus 204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 0011224578899999 999999999999999999976543211 13458999999999999998 8999999999
Q ss_pred EEEEEccCCc------------------eEEeeecCCCCceEEEEECCCCcEEE-EEeCCCeEEEEEcCC
Q 007283 515 AIVWDRVSRE------------------VKLKNMLYHTARINCLAWSPNNSMVA-TGSLDTCVIIYEIDK 565 (609)
Q Consensus 515 v~iwd~~~~~------------------~~~~~~~~h~~~i~~l~~s~d~~~l~-s~s~D~~v~vw~~~~ 565 (609)
+++||+.... ..+..+..|...|++++|+|++++|+ +++.|+.|++|++..
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 9999986532 23445678999999999999999998 899999999999875
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-35 Score=298.62 Aligned_cols=310 Identities=16% Similarity=0.200 Sum_probs=215.5
Q ss_pred EecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC--ceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 007283 141 FDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF--KFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK 218 (609)
Q Consensus 141 ~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~ 218 (609)
+..+...|.+++|+|++. .+++|+.|+.+++|+..+. +....+.+|...|++++|+|++++|++++.|+.+++||..
T Consensus 7 ~~~~~~~v~~~~~s~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRT-EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEECSSCCSCCEECSSSS-EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred EecCCCcEEEEEECCCCC-EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 345667899999999988 5999999999999998877 6777889999999999999999999999999999999998
Q ss_pred CCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEE
Q 007283 219 TADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVI 298 (609)
Q Consensus 219 ~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (609)
+++.........+|...|.+++|+|++++|++++.|+.|++||+......
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~------------------------------ 135 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW------------------------------ 135 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----C------------------------------
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccc------------------------------
Confidence 87611111123479999999999999999999999999999998631100
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeC-CCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeC
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSG-HMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE 377 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (609)
.....+.+ |...|.++++++ ++.++++++.|++|++|+......
T Consensus 136 ----------------~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~------------------ 180 (377)
T 3dwl_C 136 ----------------WVSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDV------------------ 180 (377)
T ss_dssp ----------------CCCEEECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSC------------------
T ss_pred ----------------eeeeEeecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEeccc------------------
Confidence 00112233 666666666653 345666666666666664321100
Q ss_pred CcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC
Q 007283 378 EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP 457 (609)
Q Consensus 378 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 457 (609)
. ... ...+
T Consensus 181 -----------------~-----------------------------------------~~~--------------~~~~ 188 (377)
T 3dwl_C 181 -----------------D-----------------------------------------AKP--------------EASV 188 (377)
T ss_dssp -----------------C------------------------------------------CC--------------CSCS
T ss_pred -----------------C-----------------------------------------CCc--------------cccc
Confidence 0 000 0001
Q ss_pred CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceE---EeeecCCC
Q 007283 458 DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVK---LKNMLYHT 534 (609)
Q Consensus 458 ~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~---~~~~~~h~ 534 (609)
.+..+ ..+. ....+ +|.+.|.+++|+|+++++++++.|++|++||+.+.+.. +..+..|.
T Consensus 189 ~~~~~--------------~~~~--~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 251 (377)
T 3dwl_C 189 WGSRL--------------PFNT--VCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ 251 (377)
T ss_dssp SCSCC--------------CEEE--EEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS
T ss_pred ccccc--------------chhh--hhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC
Confidence 11000 0011 12234 89999999999999999999999999999998877541 34567899
Q ss_pred CceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCc---------------------------------------------
Q 007283 535 ARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASS--------------------------------------------- 569 (609)
Q Consensus 535 ~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~--------------------------------------------- 569 (609)
..|++++|+|++++|++|+.|+.+ +|+.......
T Consensus 252 ~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (377)
T 3dwl_C 252 LPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLK 330 (377)
T ss_dssp SCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------
T ss_pred CceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhc
Confidence 999999999999999999887776 5654311100
Q ss_pred -----ceeEeccccCCeEEEEEc-C-CC---eEEEEeCCCcEEEEEc
Q 007283 570 -----RMTIKGAHLGGVYGLAFT-D-EH---SVVSSGEDACVRVWRL 606 (609)
Q Consensus 570 -----~~~~~~~h~~~v~~~~~s-~-~~---~l~s~s~D~~i~~W~~ 606 (609)
......+|...|+++++. + +. .|+|+|.||.|++|++
T Consensus 331 g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 331 GSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000122499999999976 3 23 6999999999999986
No 65
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.6e-33 Score=292.31 Aligned_cols=322 Identities=19% Similarity=0.290 Sum_probs=247.2
Q ss_pred cccccCCCCc-EEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 51 SIYGEHAYPA-TVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 51 ~~~~~h~~~v-~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
..+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++. ...+..|.+.|.+++|+|++ .|++++.+. .+++
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~-~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg---~i~v 187 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKF-LLQLSGHDGGVWALKYAHGG-ILVSGSTDR---TVRV 187 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSTT-EEEEEETTS---CEEE
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcE-EEEEeCCCcCEEEEEEcCCC-EEEEEeCCC---CEEE
Confidence 4578999885 55555 678999999999999999988764 45678899999999999999 777776543 4788
Q ss_pred EEcCCCCeeEEEecCCccEEEEEEeeC-CCeEEEEecCCCeEEEEeCCCCce-----------------------eeecc
Q 007283 130 FMWDSGTNVGEFDGHSRRVLSCAFKPS-RPFRIATCGEDFLVNFYEGPPFKF-----------------------KLSHR 185 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~i~t~~~d~~i~~~~~~~~~~-----------------------~~~~~ 185 (609)
|+.+.+..+..+.+|...|.+++|+|. +...+++|+.|+.+++|+....+. ...+.
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 888888889999999999999999963 334699999999999999765432 34567
Q ss_pred CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccC
Q 007283 186 GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISED 265 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~ 265 (609)
+|...+.++ +++++.|++++.|+.+++||..+++.+..+ .+|...|.+++|+|+++++++++.|++|++||+..
T Consensus 268 ~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~- 341 (464)
T 3v7d_B 268 GHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL---SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN- 341 (464)
T ss_dssp CCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-
T ss_pred CccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEe---cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-
Confidence 888888876 678889999999999999999998887766 37999999999999999999999999999999852
Q ss_pred CCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEec
Q 007283 266 NHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSY 345 (609)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~ 345 (609)
++.. ..+.+|...|.++.+.
T Consensus 342 --~~~~----------------------------------------------~~~~~h~~~v~~~~~~------------ 361 (464)
T 3v7d_B 342 --GELM----------------------------------------------YTLQGHTALVGLLRLS------------ 361 (464)
T ss_dssp --TEEE----------------------------------------------EEECCCSSCEEEEEEC------------
T ss_pred --CcEE----------------------------------------------EEEeCCCCcEEEEEEc------------
Confidence 2111 1223454455444442
Q ss_pred CCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEE
Q 007283 346 DGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVL 425 (609)
Q Consensus 346 dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (609)
T Consensus 362 -------------------------------------------------------------------------------- 361 (464)
T 3v7d_B 362 -------------------------------------------------------------------------------- 361 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCE
Q 007283 426 VSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSM 505 (609)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~ 505 (609)
+.++++|+.||.|++||+...... ....|...+..++|+|++.+
T Consensus 362 ---------------------------------~~~l~s~s~dg~v~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 362 ---------------------------------DKFLVSAAADGSIRGWDANDYSRK---FSYHHTNLSAITTFYVSDNI 405 (464)
T ss_dssp ---------------------------------SSEEEEEETTSEEEEEETTTCCEE---EEEECTTCCCEEEEEECSSE
T ss_pred ---------------------------------CCEEEEEeCCCcEEEEECCCCcee---eeecCCCCccEEEEEeCCCE
Confidence 234455555555555555433211 11135556777889999999
Q ss_pred EEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 506 FASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 506 l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
+++|+ |+.+++||+.+++........|...|++++|+ +..++++++.|+.+.+|-+
T Consensus 406 l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 406 LVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred EEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99998 99999999988876554467799999999997 4566677778887766543
No 66
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.7e-35 Score=292.86 Aligned_cols=295 Identities=12% Similarity=0.064 Sum_probs=208.4
Q ss_pred ccceEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCccccc--c-----CcCCCCccceEEEEECCCCCeEEEEeC
Q 007283 188 SNFVNCVRFSPDGSKFISVSSDK-------KGIIYDGKTADKIGE--L-----SPEDGHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 188 ~~~v~~l~~s~dg~~l~s~~~d~-------~i~iwd~~~~~~~~~--~-----~~~~~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
..+|++++|+|||++|++|+.|. .|++|+......... + ....+|...|.+++++ +..+++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 35799999999999999998654 499998765442210 0 0123677788887764 556666654
Q ss_pred -----------CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeC
Q 007283 254 -----------DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSG 322 (609)
Q Consensus 254 -----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~ 322 (609)
|+++|+|++.... ..... .... .......
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~--~~~~~----------------------------------~~~~----~~~~~~~ 131 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVN--DQLEF----------------------------------LTSV----DFDASTN 131 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTT--TEEEE----------------------------------EEEE----CSSCCCC
T ss_pred CCccEEEEecCCCcEEEEEecCCC--ceEEE----------------------------------eeee----ceeecCC
Confidence 5556666553211 00000 0000 0011223
Q ss_pred CCCCeEEEEEecCCCCEE--EEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccc
Q 007283 323 HMKNVTALTVLNIDPKVI--LSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCG 400 (609)
Q Consensus 323 h~~~v~~~~~~~~~~~~~--~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 400 (609)
+...+..++|++ +++++ ++++.|++|++|+.....
T Consensus 132 ~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~------------------------------------------ 168 (365)
T 4h5i_A 132 ADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLT------------------------------------------ 168 (365)
T ss_dssp TTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTE------------------------------------------
T ss_pred cccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCc------------------------------------------
Confidence 455677888875 44554 456689999999764321
Q ss_pred cccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCe
Q 007283 401 YANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDT 480 (609)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~ 480 (609)
....+.+..+|.+++|+|||+++++++.|+ +++|+...+.
T Consensus 169 ---------------------------------------~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~ 208 (365)
T 4h5i_A 169 ---------------------------------------EKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGS 208 (365)
T ss_dssp ---------------------------------------EEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCC
T ss_pred ---------------------------------------EEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCc
Confidence 001112234588999999999999998555 5666655555
Q ss_pred eeeeEEEecCCCceEEEEECCCCCEEEEEeCCC----eEEEEEccCCceE---EeeecCCCCceEEEEECCCCcEEEEEe
Q 007283 481 LTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNR----EAIVWDRVSREVK---LKNMLYHTARINCLAWSPNNSMVATGS 553 (609)
Q Consensus 481 ~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~----~v~iwd~~~~~~~---~~~~~~h~~~i~~l~~s~d~~~l~s~s 553 (609)
........+|...|.+++|+|++.++++++.|+ ++++|+....... ...+..|...|++++|||||++||+|+
T Consensus 209 ~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs 288 (365)
T 4h5i_A 209 CIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLAS 288 (365)
T ss_dssp EEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEE
T ss_pred ceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEc
Confidence 444455678999999999999999999999888 6889997665432 234668999999999999999999999
Q ss_pred CCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEccC
Q 007283 554 LDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 554 ~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~ 608 (609)
.|++|+|||+.+.+ ....++.+|...|++|+|| |+++|+|+|.|++|+||+|..
T Consensus 289 ~D~~V~iwd~~~~~-~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 289 NDNSIALVKLKDLS-MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TTSCEEEEETTTTE-EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEECCCCc-EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999997643 3334568999999999999 789999999999999999953
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-34 Score=290.92 Aligned_cols=296 Identities=16% Similarity=0.143 Sum_probs=230.1
Q ss_pred CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeec--cCcccceEEEEEcC-CCCEEEEEeCCCcE
Q 007283 136 TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSH--RGHSNFVNCVRFSP-DGSKFISVSSDKKG 212 (609)
Q Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~l~~s~-dg~~l~s~~~d~~i 212 (609)
.....+.+|...|.+++|+|++...+++|+.|+.+++|+....+....+ .+|...|.+++|+| ++++|++++.|+.+
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 3445678999999999999998446999999999999998877665554 47999999999999 67899999999999
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
++||... ..+..+....+|...|.+++|+|++++|++++.|+.|++||++ ++..
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~--------------------- 197 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEI--------------------- 197 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEE---------------------
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEE---------------------
Confidence 9999985 4444443334567889999999999999999999999999974 1111
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
..+.+|...|.++++++..+.++++++.|++|++|+.......
T Consensus 198 -------------------------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------ 240 (383)
T 3ei3_B 198 -------------------------FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK------------ 240 (383)
T ss_dssp -------------------------EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST------------
T ss_pred -------------------------EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc------------
Confidence 2244688899999998655459999999999999976432100
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeE
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTA 452 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (609)
......+.+..++.+
T Consensus 241 -----------------------------------------------------------------~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 241 -----------------------------------------------------------------NSYIAEMPHEKPVNA 255 (383)
T ss_dssp -----------------------------------------------------------------TCEEEEEECSSCEEE
T ss_pred -----------------------------------------------------------------cceEEEecCCCceEE
Confidence 000111123356889
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecC-------C----------CceEEEEECCCCCEEEEEeCCCe
Q 007283 453 SAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKH-------R----------GAVSVIRYSPDVSMFASGDVNRE 514 (609)
Q Consensus 453 ~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h-------~----------~~i~~v~~s~~~~~l~s~s~d~~ 514 (609)
++++| +++++++++.|+.|++||++..... ..+.+| . +.+.+++|+|++++ +|+.|++
T Consensus 256 ~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~ 331 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP--DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT 331 (383)
T ss_dssp EEECTTTSCEEEEEESSSEEEEEETTBTTSC--SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC
T ss_pred EEEcCCCCCEEEEEcCCCcEEEEECCCCccc--cccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe
Confidence 99999 9999999999999999999765432 223323 2 34555777888877 8889999
Q ss_pred EEEEEccCCceEEeeecC--CCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 515 AIVWDRVSREVKLKNMLY--HTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 515 v~iwd~~~~~~~~~~~~~--h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
|++||+.+++.. ..+.. |...+.+++|+|++++|++|+ |+.|++||++.
T Consensus 332 i~iwd~~~~~~~-~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 332 IDIYDANSGGLV-HQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEETTTCCEE-EEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEEecCCCcee-eeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 999998877653 33444 567788889999999999997 99999999863
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.4e-33 Score=287.32 Aligned_cols=321 Identities=20% Similarity=0.329 Sum_probs=254.4
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEe
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYD 216 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd 216 (609)
....+.+|.+.|.. ++++++. .+++|+.|+.+++|+..+++....+.+|...|.++.|+ ++.|++|+.|+.|++||
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd 185 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWN 185 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETT-EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEE
T ss_pred eeEEecccCCCcEE-EEEEcCC-EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEE
Confidence 34568899987543 2455565 59999999999999999999999999999999999997 56899999999999999
Q ss_pred CCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeE
Q 007283 217 GKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFL 296 (609)
Q Consensus 217 ~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (609)
..+++.+..+ .+|...|.++.|+ +.++++++.|++|++||+.. ++..
T Consensus 186 ~~~~~~~~~~---~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~---~~~~------------------------- 232 (445)
T 2ovr_B 186 AETGECIHTL---YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIET---GQCL------------------------- 232 (445)
T ss_dssp TTTTEEEEEE---CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSS---CCEE-------------------------
T ss_pred CCcCcEEEEE---CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCC---CcEE-------------------------
Confidence 9999887766 3799999999995 57899999999999999862 2111
Q ss_pred EEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeee
Q 007283 297 VIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI 376 (609)
Q Consensus 297 ~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~ 376 (609)
..+.+|...|.++.+ ++..+++++.||.|++|+...+.. +
T Consensus 233 ---------------------~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~----------~------ 272 (445)
T 2ovr_B 233 ---------------------HVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETC----------L------ 272 (445)
T ss_dssp ---------------------EEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEE----------E------
T ss_pred ---------------------EEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcE----------e------
Confidence 123467888888887 447899999999999997643210 0
Q ss_pred CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEc
Q 007283 377 EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIA 456 (609)
Q Consensus 377 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 456 (609)
..+ ..+..++.++++
T Consensus 273 -------------~~~---------------------------------------------------~~~~~~v~~~~~- 287 (445)
T 2ovr_B 273 -------------HTL---------------------------------------------------QGHTNRVYSLQF- 287 (445)
T ss_dssp -------------EEE---------------------------------------------------CCCSSCEEEEEE-
T ss_pred -------------EEe---------------------------------------------------cCCCCceEEEEE-
Confidence 000 001134566666
Q ss_pred CCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecC---C
Q 007283 457 PDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY---H 533 (609)
Q Consensus 457 p~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---h 533 (609)
++.++++|+.|+.|++||+.++.. ...+.+|...+.++.+ ++.++++|+.|+.+++||+.+.+.. ..+.. |
T Consensus 288 -~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~ 361 (445)
T 2ovr_B 288 -DGIHVVSGSLDTSIRVWDVETGNC--IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCL-QTLQGPNKH 361 (445)
T ss_dssp -CSSEEEEEETTSCEEEEETTTCCE--EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEE-EEECSTTSC
T ss_pred -CCCEEEEEeCCCeEEEEECCCCCE--EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEE-EEEccCCCC
Confidence 789999999999999999987654 3567889999998887 5679999999999999998776543 33443 8
Q ss_pred CCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeE----eccccCCeEEEEEc-CCCeEEEEeCCCc----EEEE
Q 007283 534 TARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTI----KGAHLGGVYGLAFT-DEHSVVSSGEDAC----VRVW 604 (609)
Q Consensus 534 ~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~----~~~h~~~v~~~~~s-~~~~l~s~s~D~~----i~~W 604 (609)
...|++++|+ +++|++|+.||+|++||+..+. ....+ ..+|.+.|++++|+ ++..+++++.||+ +.+|
T Consensus 362 ~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~ 438 (445)
T 2ovr_B 362 QSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE-FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 438 (445)
T ss_dssp SSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC-EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEE
T ss_pred CCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc-eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEE
Confidence 8899999995 6899999999999999998643 22222 14788999999999 5677889999998 9999
Q ss_pred EccC
Q 007283 605 RLTP 608 (609)
Q Consensus 605 ~~~~ 608 (609)
+++.
T Consensus 439 df~~ 442 (445)
T 2ovr_B 439 DFDV 442 (445)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9975
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5e-35 Score=300.67 Aligned_cols=297 Identities=18% Similarity=0.197 Sum_probs=224.4
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc--eeeeccCcccceEEEEEcC-CCCEEEEEeCCCcEEEE
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK--FKLSHRGHSNFVNCVRFSP-DGSKFISVSSDKKGIIY 215 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~d~~i~iw 215 (609)
....+|...|++++|+|.++.+||+|+.|+.|++||....+ ....+.+|...|++|+|+| ++.+|++|+.|++|++|
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 34568889999999999877679999999999999987654 3455679999999999998 68899999999999999
Q ss_pred eCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCe
Q 007283 216 DGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDF 295 (609)
Q Consensus 216 d~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (609)
|.+++... .+.....+...+.+++|+|++.+|++|+.||+|++||++. +.
T Consensus 193 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~----~~------------------------- 242 (435)
T 4e54_B 193 DFKGNILR-VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG----KE------------------------- 242 (435)
T ss_dssp ETTSCEEE-EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS----CB-------------------------
T ss_pred eccCCcee-EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc----ce-------------------------
Confidence 98765432 2222234556788999999999999999999999999752 10
Q ss_pred EEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeee
Q 007283 296 LVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAA 375 (609)
Q Consensus 296 ~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~ 375 (609)
...+.+|...|.+++|++..+.++++++.|++|++|+.........
T Consensus 243 ---------------------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~------------- 288 (435)
T 4e54_B 243 ---------------------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS------------- 288 (435)
T ss_dssp ---------------------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC-------------
T ss_pred ---------------------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce-------------
Confidence 1224578899999999876667999999999999998643210000
Q ss_pred eCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEE
Q 007283 376 IEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAI 455 (609)
Q Consensus 376 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (609)
......+..+|.+++|
T Consensus 289 ----------------------------------------------------------------~~~~~~h~~~v~~~~~ 304 (435)
T 4e54_B 289 ----------------------------------------------------------------FLYSLPHRHPVNAACF 304 (435)
T ss_dssp ----------------------------------------------------------------CSBCCBCSSCEEECCB
T ss_pred ----------------------------------------------------------------EEEeeeccccccceeE
Confidence 0000012346888999
Q ss_pred cCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCC------ceEEEEECCCCCEEEEEe------------CCCeEEE
Q 007283 456 APDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRG------AVSVIRYSPDVSMFASGD------------VNREAIV 517 (609)
Q Consensus 456 sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~------~i~~v~~s~~~~~l~s~s------------~d~~v~i 517 (609)
+|+|++|++|+.||+|++|++..+... ..+..|.. .+....|+|++..+++++ .++.|++
T Consensus 305 spdg~~l~s~~~D~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~i 382 (435)
T 4e54_B 305 SPDGARLLTTDQKSEIRVYSASQWDCP--LGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDV 382 (435)
T ss_dssp CTTSSEEEEEESSSCEEEEESSSSSSE--EEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEE
T ss_pred CCCCCeeEEEcCCCEEEEEECCCCccc--eEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEE
Confidence 999999999999999999999876542 22333321 223345667766666654 3467999
Q ss_pred EEccCCceEEeeecCCCCceEEE-EECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 518 WDRVSREVKLKNMLYHTARINCL-AWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 518 wd~~~~~~~~~~~~~h~~~i~~l-~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
||..+++........|...|.++ +|||||++||+|+ |++|+||++..+
T Consensus 383 wd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 383 FDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp ECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred EECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 99988776554455788899988 7999999999886 889999998754
No 70
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-33 Score=275.15 Aligned_cols=253 Identities=22% Similarity=0.346 Sum_probs=199.8
Q ss_pred CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEe
Q 007283 230 DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFS 309 (609)
Q Consensus 230 ~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (609)
.+|.+.|++++|+|+|++|++++.|++|++||+.... .
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~-~----------------------------------------- 43 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET-H----------------------------------------- 43 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC-B-----------------------------------------
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC-c-----------------------------------------
Confidence 4899999999999999999999999999999975210 0
Q ss_pred CCCCCCCceeeeCCCCCeEEEEEecC-CCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccce
Q 007283 310 ANDLEKSPLQLSGHMKNVTALTVLNI-DPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNK 388 (609)
Q Consensus 310 ~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 388 (609)
.....+.+|...|.+++|.+. .+.++++|+.|++|++|+...+.... +
T Consensus 44 -----~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~--------~------------------ 92 (297)
T 2pm7_B 44 -----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ--------I------------------ 92 (297)
T ss_dssp -----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC--------C------------------
T ss_pred -----EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE--------E------------------
Confidence 112346789999999999642 36799999999999999764321000 0
Q ss_pred EEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC--CCEEEEEe
Q 007283 389 IWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD--GSEAIIGS 466 (609)
Q Consensus 389 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--g~~l~~gs 466 (609)
.....+...+.+++++|+ |.++++|+
T Consensus 93 ----------------------------------------------------~~~~~h~~~v~~v~~~p~~~g~~l~s~s 120 (297)
T 2pm7_B 93 ----------------------------------------------------AVHAVHSASVNSVQWAPHEYGPMLLVAS 120 (297)
T ss_dssp ----------------------------------------------------EEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ----------------------------------------------------EEeecCCCceeEEEeCcCCCCcEEEEEE
Confidence 000012245889999998 89999999
Q ss_pred CCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC-------------CCEEEEEeCCCeEEEEEccCCce---EEeee
Q 007283 467 QDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD-------------VSMFASGDVNREAIVWDRVSREV---KLKNM 530 (609)
Q Consensus 467 ~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~-------------~~~l~s~s~d~~v~iwd~~~~~~---~~~~~ 530 (609)
.|++|++|+++.........+.+|...|.+++|+|+ +++|++|+.|++|++||+.+... ....+
T Consensus 121 ~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l 200 (297)
T 2pm7_B 121 SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL 200 (297)
T ss_dssp TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE
T ss_pred CCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe
Confidence 999999999976532223567899999999999997 57999999999999999876542 23456
Q ss_pred cCCCCceEEEEECCCC---cEEEEEeCCCeEEEEEcCCCCCc-ceeEe--ccccCCeEEEEEc-CCCeEEEEeCCCcEEE
Q 007283 531 LYHTARINCLAWSPNN---SMVATGSLDTCVIIYEIDKPASS-RMTIK--GAHLGGVYGLAFT-DEHSVVSSGEDACVRV 603 (609)
Q Consensus 531 ~~h~~~i~~l~~s~d~---~~l~s~s~D~~v~vw~~~~~~~~-~~~~~--~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~ 603 (609)
.+|...|++++|+|++ ++||+++.|++|++||+...... ..... .+|...|++++|+ ++++|++++.|++|++
T Consensus 201 ~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~l 280 (297)
T 2pm7_B 201 EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTL 280 (297)
T ss_dssp CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEE
Confidence 7899999999999995 89999999999999998753211 11222 4688999999999 7889999999999999
Q ss_pred EEcc
Q 007283 604 WRLT 607 (609)
Q Consensus 604 W~~~ 607 (609)
|++.
T Consensus 281 w~~~ 284 (297)
T 2pm7_B 281 WKEN 284 (297)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9975
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.2e-34 Score=287.61 Aligned_cols=338 Identities=19% Similarity=0.259 Sum_probs=230.3
Q ss_pred ccccCCCCcEEEEECCC----CCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceE
Q 007283 52 IYGEHAYPATVARFSPN----GEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLV 127 (609)
Q Consensus 52 ~~~~h~~~v~~~~~sp~----g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~ 127 (609)
...+|.+.|++++|+|+ ..++++++.++.|+|||+.+++.+. .+..+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~-~~~~~---------------------------- 63 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR-LLQSY---------------------------- 63 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE-EEEEE----------------------------
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE-eeeec----------------------------
Confidence 45689999999999994 4455555566799999998655321 11110
Q ss_pred EEEEcCCCCeeEEEecCCccEEEEEEeeCCC---eEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcC-CCCEE
Q 007283 128 RAFMWDSGTNVGEFDGHSRRVLSCAFKPSRP---FRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSP-DGSKF 203 (609)
Q Consensus 128 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~---~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l 203 (609)
....|...|.+++|+|++. ..+++|+.|+.+++|+..+.+....+.+|...|.+++|+| ++.+|
T Consensus 64 ------------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 131 (366)
T 3k26_A 64 ------------VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLL 131 (366)
T ss_dssp ------------ECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEE
T ss_pred ------------cccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEE
Confidence 0113566788888888732 3699999999999999999988888999999999999999 89999
Q ss_pred EEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCcc
Q 007283 204 ISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVD 283 (609)
Q Consensus 204 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 283 (609)
++++.|+.|++||..+++.+..+....+|...|.+++|+|++++|++++.|+.|++||+.. ++....+........
T Consensus 132 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~~- 207 (366)
T 3k26_A 132 LSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS---KRMMNAIKESYDYNP- 207 (366)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS---HHHHHHHHHHHTCCG-
T ss_pred EEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC---CccccccceeEEecC-
Confidence 9999999999999999887776643357999999999999999999999999999999863 221111110000000
Q ss_pred ceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceec
Q 007283 284 DMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQ 363 (609)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~ 363 (609)
....+... .... .........+|...|.+++++ +.++++++.|+.|++|+..........
T Consensus 208 --------~~~~~~~~----~~~~-----~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~ 267 (366)
T 3k26_A 208 --------NKTNRPFI----SQKI-----HFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDK 267 (366)
T ss_dssp --------GGCSSCCC----CEEE-----CCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGG
T ss_pred --------CCCccccc----ceee-----ccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccc
Confidence 00000000 0000 000011223355555555554 245555555555555543211000000
Q ss_pred cccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEE
Q 007283 364 RKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVST 443 (609)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (609)
T Consensus 268 -------------------------------------------------------------------------------- 267 (366)
T 3k26_A 268 -------------------------------------------------------------------------------- 267 (366)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC--CCEEEEEeCCCeEEEEEcc
Q 007283 444 INLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD--VSMFASGDVNREAIVWDRV 521 (609)
Q Consensus 444 ~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~--~~~l~s~s~d~~v~iwd~~ 521 (609)
+.+. . ........+..|...|.+++|+|+ +.++++|+.|+.|++||+.
T Consensus 268 -----------~~~~---------~----------~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 268 -----------IKPS---------E----------SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp -----------CCTT---------C----------CCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECC
T ss_pred -----------cccC---------C----------cchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECC
Confidence 0000 0 000123456789999999999999 9999999999999999987
Q ss_pred CCce---EEeeecCC--CCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 522 SREV---KLKNMLYH--TARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 522 ~~~~---~~~~~~~h--~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
+.+. ....+..| ...|++++|+|++++|++++.||.|++||+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 318 VEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 7542 22345566 7899999999999999999999999999974
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=280.62 Aligned_cols=204 Identities=18% Similarity=0.206 Sum_probs=174.2
Q ss_pred cccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEE
Q 007283 51 SIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAF 130 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~ 130 (609)
..+.+|++.|++++|+|+|++||+++.||+|+|||+.+++. ...+..|...|.+++|+|++++|++++.+. .+++|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~iw 101 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-LGTLDGHTGTIWSIDVDCFTKYCVTGSADY---SIKLW 101 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTT---EEEEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-hhhhhhcCCcEEEEEEcCCCCEEEEEeCCC---eEEEE
Confidence 45789999999999999999999999999999999988764 356788999999999999999999987643 57888
Q ss_pred EcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC-----CeEEEEeCCCCc-----------eeeeccCccc--ceE
Q 007283 131 MWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED-----FLVNFYEGPPFK-----------FKLSHRGHSN--FVN 192 (609)
Q Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d-----~~i~~~~~~~~~-----------~~~~~~~h~~--~v~ 192 (609)
+.+.+..+..+. |...|.+++|+|++.. +++++.+ +.+.+|+..... ....+..|.. .+.
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 888888888777 8889999999999985 7777777 999999864332 2223344555 899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCC-CccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 193 CVRFSPDGSKFISVSSDKKGIIYDGKT-ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 193 ~l~~s~dg~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+++|+|+++.|++++.|+.+.+||..+ .+.+..+ ..|...|.+++|+|++++|++++.|+.|++||+.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSI---DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEE---ecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 999999999999999999999999988 5555444 3688999999999999999999999999999986
No 73
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-33 Score=273.83 Aligned_cols=287 Identities=17% Similarity=0.214 Sum_probs=230.0
Q ss_pred CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcE
Q 007283 178 FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSA 257 (609)
Q Consensus 178 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i 257 (609)
.+....+.+|...|++++| |++++|++++.|+.+++||..+++....+ ..|.+.|.+++|+|++++|++++.|+.+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV---YTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE---EECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe---ecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 4566778999999999999 99999999999999999999887766555 3688999999999999999999999999
Q ss_pred EEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCC
Q 007283 258 KVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDP 337 (609)
Q Consensus 258 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 337 (609)
++|++...... .....+.+|...|.++.+. +
T Consensus 84 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~i~~~~~~---~ 114 (313)
T 3odt_A 84 NGVPLFATSGE----------------------------------------------DPLYTLIGHQGNVCSLSFQ---D 114 (313)
T ss_dssp EEEETTCCTTS----------------------------------------------CC-CEECCCSSCEEEEEEE---T
T ss_pred EEEEeeecCCC----------------------------------------------CcccchhhcccCEEEEEec---C
Confidence 99998632111 1123456788899999883 4
Q ss_pred CEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEee
Q 007283 338 KVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVA 417 (609)
Q Consensus 338 ~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (609)
..+++++.|+.|++|+.... + ..
T Consensus 115 ~~l~~~~~d~~i~~~d~~~~------------~-------------------~~-------------------------- 137 (313)
T 3odt_A 115 GVVISGSWDKTAKVWKEGSL------------V-------------------YN-------------------------- 137 (313)
T ss_dssp TEEEEEETTSEEEEEETTEE------------E-------------------EE--------------------------
T ss_pred CEEEEEeCCCCEEEEcCCcE------------E-------------------Ee--------------------------
Confidence 69999999999999961100 0 00
Q ss_pred ccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEec-CCCceE
Q 007283 418 LHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEK-HRGAVS 495 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~-h~~~i~ 495 (609)
...+..++.+++++| ++..+++++.||.|++||.. .. ...+.. |...|.
T Consensus 138 -------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~--~~~~~~~~~~~i~ 188 (313)
T 3odt_A 138 -------------------------LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KV--IKTFSGIHNDVVR 188 (313)
T ss_dssp -------------------------EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EE--EEEECSSCSSCEE
T ss_pred -------------------------cccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ce--EEEEeccCcccEE
Confidence 001123466777777 99999999999999999932 22 234555 899999
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEec
Q 007283 496 VIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKG 575 (609)
Q Consensus 496 ~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~ 575 (609)
+++|+|++. +++++.|+.+++||+.+.+. +..+..|...|++++|+|++ .|++++.|+.|++||+.... ......
T Consensus 189 ~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~--~~~~~~ 263 (313)
T 3odt_A 189 HLAVVDDGH-FISCSNDGLIKLVDMHTGDV-LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS--LKQVIT 263 (313)
T ss_dssp EEEEEETTE-EEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC--EEEEEE
T ss_pred EEEEcCCCe-EEEccCCCeEEEEECCchhh-hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc--eeEEEe
Confidence 999999999 99999999999999887654 34567899999999999999 58899999999999997643 344556
Q ss_pred cccCCeEEEEEcCCCeEEEEeCCCcEEEEEccC
Q 007283 576 AHLGGVYGLAFTDEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 576 ~h~~~v~~~~~s~~~~l~s~s~D~~i~~W~~~~ 608 (609)
.|...|++++|+++..+++++.|+.|++|++..
T Consensus 264 ~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 264 LPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp CSSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred ccCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 799999999999555588899999999999863
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=281.40 Aligned_cols=299 Identities=13% Similarity=0.170 Sum_probs=226.7
Q ss_pred eeccCcccceEEEEEcCCCCEE-EEEeC---CCcEEEEeCCCCccccccCcCCCCccceEEEEECCC---CCeEEEEeCC
Q 007283 182 LSHRGHSNFVNCVRFSPDGSKF-ISVSS---DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPD---GKQVLTASAD 254 (609)
Q Consensus 182 ~~~~~h~~~v~~l~~s~dg~~l-~s~~~---d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd---~~~l~s~s~d 254 (609)
..+.+|...|.+++|+|++..+ ++++. |+.+++||..+++...... .+|...|.+++|+|+ +.+|++++.|
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE--IEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE--EEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee--ecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4456799999999999999755 45555 8999999998877543332 268899999999999 6999999999
Q ss_pred CcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEe-
Q 007283 255 KSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVL- 333 (609)
Q Consensus 255 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~- 333 (609)
+.|++||+.... .....+.+|...|.++.+.
T Consensus 90 g~i~iwd~~~~~------------------------------------------------~~~~~~~~~~~~v~~~~~~~ 121 (357)
T 3i2n_A 90 GNLHIWNLEAPE------------------------------------------------MPVYSVKGHKEIINAIDGIG 121 (357)
T ss_dssp SCEEEECTTSCS------------------------------------------------SCSEEECCCSSCEEEEEEES
T ss_pred CeEEEEeCCCCC------------------------------------------------ccEEEEEecccceEEEeecc
Confidence 999999986311 0112345688888888764
Q ss_pred ----cCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCC
Q 007283 334 ----NIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGS 409 (609)
Q Consensus 334 ----~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 409 (609)
..++.++++++.|+.|++|+...... .+..+ .....
T Consensus 122 ~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~---------~~~~~-------------------~~~~~------------ 161 (357)
T 3i2n_A 122 GLGIGEGAPEIVTGSRDGTVKVWDPRQKDD---------PVANM-------------------EPVQG------------ 161 (357)
T ss_dssp GGGCC-CCCEEEEEETTSCEEEECTTSCSS---------CSEEE-------------------CCCTT------------
T ss_pred ccccCCCccEEEEEeCCCeEEEEeCCCCCC---------cceec-------------------cccCC------------
Confidence 24567999999999999998754210 00000 00000
Q ss_pred CCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEE----EcCCCCEEEEEeCCCcEEEEEecCCeeeeeE
Q 007283 410 QPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASA----IAPDGSEAIIGSQDGKLRVYSIRGDTLTEEA 485 (609)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~ 485 (609)
.....+.+++ ++|+++++++|+.||.|++||++.+.. .
T Consensus 162 -----------------------------------~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~ 203 (357)
T 3i2n_A 162 -----------------------------------ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---R 203 (357)
T ss_dssp -----------------------------------SCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---E
T ss_pred -----------------------------------CCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---e
Confidence 0001244444 789999999999999999999987764 3
Q ss_pred EEecCCCceEEEEECC---CCCEEEEEeCCCeEEEEEccCCceE----EeeecCCCCceEEEEECCCCc-EEEEEeCCCe
Q 007283 486 VLEKHRGAVSVIRYSP---DVSMFASGDVNREAIVWDRVSREVK----LKNMLYHTARINCLAWSPNNS-MVATGSLDTC 557 (609)
Q Consensus 486 ~~~~h~~~i~~v~~s~---~~~~l~s~s~d~~v~iwd~~~~~~~----~~~~~~h~~~i~~l~~s~d~~-~l~s~s~D~~ 557 (609)
....|...|.+++|+| ++.++++++.|+.+++||+.+.+.. ...+..|...|++++|+|+++ +|++++.||.
T Consensus 204 ~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 204 WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 3467899999999999 9999999999999999998654321 112347999999999999998 8999999999
Q ss_pred EEEEEcCCCCCc-----------------ceeEeccccCCeEEEEEc-CCCeEE-EEeCCCcEEEEEccC
Q 007283 558 VIIYEIDKPASS-----------------RMTIKGAHLGGVYGLAFT-DEHSVV-SSGEDACVRVWRLTP 608 (609)
Q Consensus 558 v~vw~~~~~~~~-----------------~~~~~~~h~~~v~~~~~s-~~~~l~-s~s~D~~i~~W~~~~ 608 (609)
|++||+...... .+....+|...|++++|+ ++++|+ |++.|+.|++|++..
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 999998743211 244466899999999999 677787 899999999999863
No 75
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-33 Score=272.01 Aligned_cols=288 Identities=21% Similarity=0.230 Sum_probs=235.2
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEe
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYD 216 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd 216 (609)
....+.+|.+.|.+++| |++.. +++++.|+.+++|+....+....+..|...|.+++|+|++++|++++.|+.+.+|+
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~-l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSK-VASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTE-EEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHhhCCCCCcEEEEe-cCCCE-EEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 45678999999999999 88875 99999999999999988888888889999999999999999999999999999999
Q ss_pred CCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeE
Q 007283 217 GKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFL 296 (609)
Q Consensus 217 ~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (609)
..............+|...|.+++| ++.+|++++.|+.|++||.. +..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~~-----~~~------------------------- 135 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKEG-----SLV------------------------- 135 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT-----EEE-------------------------
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcCC-----cEE-------------------------
Confidence 8765433222333579999999999 67899999999999999821 111
Q ss_pred EEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeee
Q 007283 297 VIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI 376 (609)
Q Consensus 297 ~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~ 376 (609)
..+..|...+.++.+.+.++..+++++.|+.|++|+....
T Consensus 136 ---------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------------------- 175 (313)
T 3odt_A 136 ---------------------YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV------------------- 175 (313)
T ss_dssp ---------------------EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE-------------------
T ss_pred ---------------------EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce-------------------
Confidence 1234577888888888766789999999999999962110
Q ss_pred CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEc
Q 007283 377 EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIA 456 (609)
Q Consensus 377 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 456 (609)
+..+. ..+...+.+++++
T Consensus 176 ------------~~~~~--------------------------------------------------~~~~~~i~~~~~~ 193 (313)
T 3odt_A 176 ------------IKTFS--------------------------------------------------GIHNDVVRHLAVV 193 (313)
T ss_dssp ------------EEEEC--------------------------------------------------SSCSSCEEEEEEE
T ss_pred ------------EEEEe--------------------------------------------------ccCcccEEEEEEc
Confidence 00000 0012457888999
Q ss_pred CCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCc
Q 007283 457 PDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTAR 536 (609)
Q Consensus 457 p~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~ 536 (609)
|++. +++|+.||.|++||++.+.. ...+.+|.+.|.+++|+|++ .+++++.|+.+++||+.+.+. ...+..|...
T Consensus 194 ~~~~-~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~ 268 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKLVDMHTGDV--LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSL-KQVITLPAIS 268 (313)
T ss_dssp ETTE-EEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCE-EEEEECSSSC
T ss_pred CCCe-EEEccCCCeEEEEECCchhh--hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCce-eEEEeccCce
Confidence 9998 99999999999999987654 45678899999999999999 689999999999999887764 3456789999
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 537 INCLAWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 537 i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
|++++|+|+++ +++++.|+.|++|++...
T Consensus 269 i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 269 IWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 99999999999 567999999999998753
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-33 Score=285.57 Aligned_cols=305 Identities=11% Similarity=0.124 Sum_probs=234.9
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc------eeeeccCcccceEEEEEcCC----C---CEEEE
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK------FKLSHRGHSNFVNCVRFSPD----G---SKFIS 205 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~------~~~~~~~h~~~v~~l~~s~d----g---~~l~s 205 (609)
..+.+|...|.+++|+| . .+++|+.|+.+++|+....+ ....+.+|...|++++|+|+ | ++|++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--S-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EESSCSSSCEEEEEECS--S-EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--C-eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 45679999999999999 3 69999999999999988776 67778899999999999999 9 99999
Q ss_pred EeCCCcEEEEeCCCCcc-----ccccCcCCCC-----ccceEEEEEC----CCCCe-EEEEeCCCcEEEeecccCCC---
Q 007283 206 VSSDKKGIIYDGKTADK-----IGELSPEDGH-----KGSVYAVSWS----PDGKQ-VLTASADKSAKVWDISEDNH--- 267 (609)
Q Consensus 206 ~~~d~~i~iwd~~~~~~-----~~~~~~~~~h-----~~~V~~l~~s----pd~~~-l~s~s~d~~i~iwd~~~~~~--- 267 (609)
++.|+.|++||..+++. +..+. +| ...|.+++|+ |++.+ |++++.|+.|++||+.....
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcCCCCEEEEEccCCcccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999888775 55543 56 5899999999 99999 99999999999999863100
Q ss_pred CceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCC
Q 007283 268 GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDG 347 (609)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg 347 (609)
++... + .....+.+. ......|...|.++++++. + ++++++.|+
T Consensus 164 ~~~~~-~-----------------~~~~~~~~~----------------~~~~~~~~~~i~~~~~~~~-~-~l~~~~~dg 207 (397)
T 1sq9_A 164 SLTLN-W-----------------SPTLELQGT----------------VESPMTPSQFATSVDISER-G-LIATGFNNG 207 (397)
T ss_dssp HTTTC-C-----------------CCEEEEEEE----------------ECCSSSSCCCCCEEEECTT-S-EEEEECTTS
T ss_pred cceee-c-----------------cCcceeeee----------------eccccCCCCCceEEEECCC-c-eEEEEeCCC
Confidence 00000 0 000000000 0001347888999998764 4 999999999
Q ss_pred cEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEE
Q 007283 348 LIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVS 427 (609)
Q Consensus 348 ~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (609)
.|++|+...... +..+.
T Consensus 208 ~i~i~d~~~~~~-----------------------------~~~~~---------------------------------- 224 (397)
T 1sq9_A 208 TVQISELSTLRP-----------------------------LYNFE---------------------------------- 224 (397)
T ss_dssp EEEEEETTTTEE-----------------------------EEEEE----------------------------------
T ss_pred cEEEEECCCCce-----------------------------eEEEe----------------------------------
Confidence 999997643210 00000
Q ss_pred ecccEEEeeCCeeeEEecc---CCceeEEEEcCCCCEEEEEeCC---CcEEEEEecCCeeeeeEEEec------------
Q 007283 428 TDSGVVLLRGAEVVSTINL---RFPVTASAIAPDGSEAIIGSQD---GKLRVYSIRGDTLTEEAVLEK------------ 489 (609)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~sp~g~~l~~gs~d---g~i~iw~~~~~~~~~~~~~~~------------ 489 (609)
. ...+ ..++.+++++|+++++++|+.| +.|++||+..+.. ...+.+
T Consensus 225 ---------~-----~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~ 288 (397)
T 1sq9_A 225 ---------S-----QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER--IGSLSVPTHSSQASLGEF 288 (397)
T ss_dssp ---------C-----CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--EEEECBC--------CCB
T ss_pred ---------c-----cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--cceeccCccccccccccc
Confidence 0 0001 2458889999999999999999 9999999987654 345666
Q ss_pred -CCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeec------CC---------------CCceEEEEECCCC-
Q 007283 490 -HRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNML------YH---------------TARINCLAWSPNN- 546 (609)
Q Consensus 490 -h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~------~h---------------~~~i~~l~~s~d~- 546 (609)
|...|.+++|+|++.+|++++.|+.|++||+.+.+.. ..+. .| ...|++++|+|++
T Consensus 289 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 289 AHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI-TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp SBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTT
T ss_pred ccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee-EEEecccCcccchhhhhccccccccccCCceeEEEeccccc
Confidence 9999999999999999999999999999999876543 3455 66 8999999999998
Q ss_pred ---------cEEEEEeCCCeEEEEEcCC
Q 007283 547 ---------SMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 547 ---------~~l~s~s~D~~v~vw~~~~ 565 (609)
++|++++.||.|++|++..
T Consensus 368 ~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 368 RSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp SBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccccceEEEecCCCcEEEEEcCC
Confidence 7999999999999999865
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-33 Score=284.76 Aligned_cols=292 Identities=19% Similarity=0.268 Sum_probs=225.0
Q ss_pred ccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcC
Q 007283 54 GEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD 133 (609)
Q Consensus 54 ~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 133 (609)
.+|.+.+.+..+++++..+++++.|++|+||++.+++.... +.
T Consensus 88 ~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~-~~------------------------------------ 130 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSAL-AE------------------------------------ 130 (401)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEE-EE------------------------------------
T ss_pred CCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEe-ee------------------------------------
Confidence 36766654444444456688888999999999987653221 11
Q ss_pred CCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 134 SGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 134 ~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
..|...|.+++|+|++. .+++|+.|+.+++|+....+....+.+|...|.+++| ++..|++++.|+.++
T Consensus 131 --------~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 199 (401)
T 4aez_A 131 --------TDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIH 199 (401)
T ss_dssp --------CCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred --------cCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEE
Confidence 12555677777777766 4788888899999999888888888899999999999 456999999999999
Q ss_pred EEeCCC-CccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 214 IYDGKT-ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 214 iwd~~~-~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
+||.+. ...+..+ .+|.+.|.+++|+|++.+|++++.|+.|++||+.. ++..
T Consensus 200 i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---~~~~--------------------- 252 (401)
T 4aez_A 200 HHDVRIANHQIGTL---QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS---SIPK--------------------- 252 (401)
T ss_dssp EEETTSSSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC---SSEE---------------------
T ss_pred EEecccCcceeeEE---cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC---CCcc---------------------
Confidence 999984 3334333 47999999999999999999999999999999862 1111
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe--cCCcEEEEecCccccceeccccccce
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS--YDGLIVKWIQGIGYGGKLQRKENSQI 370 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s--~dg~i~~W~~~~~~~~~~~~~~~~~~ 370 (609)
..+.+|...|.++++++.++.++++++ .|+.|++|+...+..
T Consensus 253 -------------------------~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~----------- 296 (401)
T 4aez_A 253 -------------------------FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR----------- 296 (401)
T ss_dssp -------------------------EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE-----------
T ss_pred -------------------------EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE-----------
Confidence 123457788999999876677888876 899999997643210
Q ss_pred eEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCce
Q 007283 371 KCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPV 450 (609)
Q Consensus 371 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (609)
...+.....+
T Consensus 297 ----------------------------------------------------------------------~~~~~~~~~v 306 (401)
T 4aez_A 297 ----------------------------------------------------------------------VNTVDAGSQV 306 (401)
T ss_dssp ----------------------------------------------------------------------EEEEECSSCE
T ss_pred ----------------------------------------------------------------------EEEEeCCCcE
Confidence 0011122357
Q ss_pred eEEEEcCCCCEEEE--EeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceE
Q 007283 451 TASAIAPDGSEAII--GSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVK 526 (609)
Q Consensus 451 ~~~~~sp~g~~l~~--gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~ 526 (609)
.+++++|+++++++ |+.||.|++|++..+.......+.+|.+.|.+++|+|++.++++++.|+.+++||+.+++..
T Consensus 307 ~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 307 TSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred EEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 88999999999999 55899999999998776666667899999999999999999999999999999998876543
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.8e-33 Score=282.51 Aligned_cols=310 Identities=16% Similarity=0.138 Sum_probs=231.7
Q ss_pred eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------cccccCcCCCCccceEEEEECCC----C---Ce
Q 007283 181 KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTAD------KIGELSPEDGHKGSVYAVSWSPD----G---KQ 247 (609)
Q Consensus 181 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~------~~~~~~~~~~h~~~V~~l~~spd----~---~~ 247 (609)
...+.+|...|++++|+| ++|++++.|+.|++|+..+++ .+..+ .+|...|.+++|+|+ + ++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH---FVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE---ECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEE---ecCCCcEEEEEEecccccCCccccE
Confidence 345779999999999999 799999999999999998877 34444 379999999999999 9 99
Q ss_pred EEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCC----
Q 007283 248 VLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGH---- 323 (609)
Q Consensus 248 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h---- 323 (609)
|++++.|+.|++||+........ .....+.+|
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~ 119 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKK--------------------------------------------VIFEKLDLLDSDM 119 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCC--------------------------------------------EEEEEECCSCTTG
T ss_pred EEEEcCCCCEEEEEccCCccccc--------------------------------------------ccceeeccccccc
Confidence 99999999999999863211000 001123345
Q ss_pred -CCCeEEEEEe----cCCCCE-EEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCC
Q 007283 324 -MKNVTALTVL----NIDPKV-ILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGD 397 (609)
Q Consensus 324 -~~~v~~~~~~----~~~~~~-~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 397 (609)
...|.+++++ + ++.. +++++.||.|++|+........ ....+. + .....
T Consensus 120 ~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~-~--~~~~~----------------- 174 (397)
T 1sq9_A 120 KKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADES----NSLTLN-W--SPTLE----------------- 174 (397)
T ss_dssp GGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHH----HHTTTC-C--CCEEE-----------------
T ss_pred CCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCcccccc----ccceee-c--cCcce-----------------
Confidence 5789999988 4 4567 9999999999999765410000 000000 0 00000
Q ss_pred ccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEec
Q 007283 398 QCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIR 477 (609)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~ 477 (609)
+. .. ......+...+.+++++|++ ++++|+.||.|++||++
T Consensus 175 ----------------~~-----------~~-----------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 175 ----------------LQ-----------GT-----------VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 215 (397)
T ss_dssp ----------------EE-----------EE-----------ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred ----------------ee-----------ee-----------eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC
Confidence 00 00 00000123468899999999 99999999999999998
Q ss_pred CCeeeeeEEEec---C---CCceEEEEECCCCCEEEEEeCC---CeEEEEEccCCceEEeeecC-------------CCC
Q 007283 478 GDTLTEEAVLEK---H---RGAVSVIRYSPDVSMFASGDVN---REAIVWDRVSREVKLKNMLY-------------HTA 535 (609)
Q Consensus 478 ~~~~~~~~~~~~---h---~~~i~~v~~s~~~~~l~s~s~d---~~v~iwd~~~~~~~~~~~~~-------------h~~ 535 (609)
.+.. ...+.. | ...|.+++|+|++.++++++.| +.+++||+.+.+.. ..+.. |..
T Consensus 216 ~~~~--~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 216 TLRP--LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI-GSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp TTEE--EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE-EEECBC--------CCBSBSS
T ss_pred CCce--eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc-ceeccCcccccccccccccCC
Confidence 7654 345667 8 9999999999999999999999 99999998776543 34556 999
Q ss_pred ceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEec------cc---------------cCCeEEEEEc-CC----
Q 007283 536 RINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKG------AH---------------LGGVYGLAFT-DE---- 589 (609)
Q Consensus 536 ~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~------~h---------------~~~v~~~~~s-~~---- 589 (609)
.|++++|+|++++|++++.|+.|++||+.... ...... +| ...|++++|+ ++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE--RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc--eeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 99999999999999999999999999997643 233334 56 8999999999 44
Q ss_pred ------CeEEEEeCCCcEEEEEccC
Q 007283 590 ------HSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 590 ------~~l~s~s~D~~i~~W~~~~ 608 (609)
++|++++.|+.|++|++..
T Consensus 371 ~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 371 MGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccccccceEEEecCCCcEEEEEcCC
Confidence 6999999999999999864
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-34 Score=291.26 Aligned_cols=322 Identities=12% Similarity=0.143 Sum_probs=224.2
Q ss_pred cCceeEEeecCCCCeEEEe-CCCEEEEEeCCCC--ccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCc--
Q 007283 16 RGRGILISGHPKSNSILYT-NGRSVIILDLSNP--LQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDH-- 90 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~--~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~-- 90 (609)
.+....++++|+|+.|++. .++.+.||++.++ +....+.+|.+.|++++|+|+|++||+++.|++|+|||+.+++
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 4556689999999999887 4689999999887 6677789999999999999999999999999999999998765
Q ss_pred eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC---eeEEEec-CCccEEEEEEeeCCCeEEEEecC
Q 007283 91 VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT---NVGEFDG-HSRRVLSCAFKPSRPFRIATCGE 166 (609)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-h~~~v~~~~~~p~~~~~i~t~~~ 166 (609)
.....+..|...|.+++|+||+++|++++.+. .+++|+.+.+. ....+.+ |...|.+++|+|++. .+++++.
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~ 166 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR---VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCA 166 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSS---CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EEEEEES
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCC---eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EEEEEeC
Confidence 12345667889999999999999999887644 35666666554 3667777 999999999999987 5999999
Q ss_pred CCeEEEEeCC------------------CCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc----cc
Q 007283 167 DFLVNFYEGP------------------PFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK----IG 224 (609)
Q Consensus 167 d~~i~~~~~~------------------~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~----~~ 224 (609)
|+.+++||.. ..+....+ +|...|.+++|+|+|++|++++.|+.|++||..+++. +.
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 9999999974 23455556 8999999999999999999999999999999998876 44
Q ss_pred ccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCc----------cceEEEEEEcCC
Q 007283 225 ELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGV----------DDMLVGCLWQND 294 (609)
Q Consensus 225 ~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 294 (609)
.+ .+|...|.+++|+|++++|++++.|+.+ +|+..... .+....+........ ........+..
T Consensus 246 ~~---~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 319 (377)
T 3dwl_C 246 TV---KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESG-WAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA- 319 (377)
T ss_dssp CE---ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC----CCSBCCCSCCCCCCBSSSSSBCCCCCC---------
T ss_pred ee---cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCc-eEEEeeeccccccccccccccccccccccccccccc-
Confidence 44 4789999999999999999999866655 66654211 111111111100000 00000000000
Q ss_pred eEEEEEcCCcEEEEeCCCC-CCCceeeeCCCCCeEEEEEecCCCC---EEEEEecCCcEEEEec
Q 007283 295 FLVIVSLGGTISIFSANDL-EKSPLQLSGHMKNVTALTVLNIDPK---VILSSSYDGLIVKWIQ 354 (609)
Q Consensus 295 ~~~~~~~~g~i~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~---~~~t~s~dg~i~~W~~ 354 (609)
.....+..+.... .........|...|.++.+.+..+. .++||+.||.|++|++
T Consensus 320 ------~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 320 ------LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ------ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0000000000000 0111223569999999997754434 6999999999999963
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.5e-33 Score=280.84 Aligned_cols=316 Identities=17% Similarity=0.198 Sum_probs=243.5
Q ss_pred CcCceeEEeecCCCCeEEEe-CCCEEEEEeCCCCc--cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCce
Q 007283 15 ERGRGILISGHPKSNSILYT-NGRSVIILDLSNPL--QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHV 91 (609)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~--~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~ 91 (609)
+.+....+.++|+|+.|++. .++.+.+|++.+++ ....+.+|.+.|++++|+|+|++|++++.|++|++||+.+++.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 45566799999999999887 56899999998886 6677889999999999999999999999999999999987653
Q ss_pred ee-EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCe---eEE-EecCCccEEEEEEeeCCCeEEEEecC
Q 007283 92 LK-KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTN---VGE-FDGHSRRVLSCAFKPSRPFRIATCGE 166 (609)
Q Consensus 92 ~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~h~~~v~~~~~~p~~~~~i~t~~~ 166 (609)
.. ..+..|...|.+++|+|++++|++++.+. .+++|+++.... ... ..+|...|.+++|+|++. .+++++.
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~ 162 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSGSR---VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSC 162 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTS---SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEET
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCCC---EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcC
Confidence 22 23456788999999999999999887543 467888877653 223 367899999999999987 4999999
Q ss_pred CCeEEEEeC------------------CCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCc
Q 007283 167 DFLVNFYEG------------------PPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSP 228 (609)
Q Consensus 167 d~~i~~~~~------------------~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 228 (609)
|+.+++||. +..+....+.+|...|.+++|+|++++|++++.|+.+++||.++++.+..+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~- 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA- 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE-
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc-
Confidence 999999994 3567777788999999999999999999999999999999999888777663
Q ss_pred CCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCce--EEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEE
Q 007283 229 EDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKL--KKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTIS 306 (609)
Q Consensus 229 ~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 306 (609)
.|...|.+++|+|++++|+++ .|+.|++|++.... +.. ...+..... ........++
T Consensus 242 --~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 300 (372)
T 1k8k_C 242 --SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAA-GKLSFGGRLDVPKQ-----------------SSQRGLTARE 300 (372)
T ss_dssp --CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTT-TEEEECCCCCCC-------------------------CHHH
T ss_pred --cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcC-ceEEEeeccCcccc-----------------chhhhcchhh
Confidence 688899999999999988887 89999999986410 211 111110000 0001112223
Q ss_pred EEeCCCCC-CCc------eee-eCCCCCeEEEEEecCCC---CEEEEEecCCcEEEEecCc
Q 007283 307 IFSANDLE-KSP------LQL-SGHMKNVTALTVLNIDP---KVILSSSYDGLIVKWIQGI 356 (609)
Q Consensus 307 ~~~~~~~~-~~~------~~~-~~h~~~v~~~~~~~~~~---~~~~t~s~dg~i~~W~~~~ 356 (609)
+|...+.. ... ..+ .+|...|.++++++.++ .+++|++.||.|++|+...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 301 RFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp HHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred hhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 33111100 010 223 48999999999886666 8999999999999998754
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.6e-33 Score=282.45 Aligned_cols=296 Identities=16% Similarity=0.225 Sum_probs=228.5
Q ss_pred ccCcccceEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCccccccCcC--CCCccceEEEEECCC----CCeEEEEeC
Q 007283 184 HRGHSNFVNCVRFSPD----GSKFISVSSDKKGIIYDGKTADKIGELSPE--DGHKGSVYAVSWSPD----GKQVLTASA 253 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~d----g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~h~~~V~~l~~spd----~~~l~s~s~ 253 (609)
..+|...|++++|+|+ ...+++++.++.+++||..+++.+..+... ..|.+.|.+++|+|+ +++|++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 4589999999999984 445666777779999999887766554321 236788999999999 679999999
Q ss_pred CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEe
Q 007283 254 DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVL 333 (609)
Q Consensus 254 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 333 (609)
|+.|++||+.. ++.. ..+.+|...|.+++++
T Consensus 94 dg~i~v~d~~~---~~~~----------------------------------------------~~~~~~~~~i~~~~~~ 124 (366)
T 3k26_A 94 RGIIRIINPIT---MQCI----------------------------------------------KHYVGHGNAINELKFH 124 (366)
T ss_dssp TCEEEEECTTT---CCEE----------------------------------------------EEEESCCSCEEEEEEC
T ss_pred CCEEEEEEchh---ceEe----------------------------------------------eeecCCCCcEEEEEEC
Confidence 99999999862 1111 2245688899999998
Q ss_pred cCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCce
Q 007283 334 NIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKD 413 (609)
Q Consensus 334 ~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~ 413 (609)
+.++.++++++.||.|++|+...+.... .+..
T Consensus 125 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----------------------------~~~~------------------- 156 (366)
T 3k26_A 125 PRDPNLLLSVSKDHALRLWNIQTDTLVA-----------------------------IFGG------------------- 156 (366)
T ss_dssp SSCTTEEEEEETTSCEEEEETTTTEEEE-----------------------------EECS-------------------
T ss_pred CCCCCEEEEEeCCCeEEEEEeecCeEEE-----------------------------Eecc-------------------
Confidence 6567899999999999999864321000 0000
Q ss_pred eEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeee----------
Q 007283 414 LSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTE---------- 483 (609)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~---------- 483 (609)
...+...+.+++++|+++++++|+.||.|++||++.+....
T Consensus 157 -----------------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 207 (366)
T 3k26_A 157 -----------------------------VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNP 207 (366)
T ss_dssp -----------------------------TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCG
T ss_pred -----------------------------cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecC
Confidence 00123458899999999999999999999999997653210
Q ss_pred ----------------eEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCce-------------EEeeecCCC
Q 007283 484 ----------------EAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREV-------------KLKNMLYHT 534 (609)
Q Consensus 484 ----------------~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~-------------~~~~~~~h~ 534 (609)
......|...|.+++|+ +.++++++.|+.+++||+.+... .+..+..|.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (366)
T 3k26_A 208 NKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ 285 (366)
T ss_dssp GGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS
T ss_pred CCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC
Confidence 11233499999999998 77999999999999999876432 244566799
Q ss_pred CceEEEEECCC--CcEEEEEeCCCeEEEEEcCCCCCc--ceeEeccc--cCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 535 ARINCLAWSPN--NSMVATGSLDTCVIIYEIDKPASS--RMTIKGAH--LGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 535 ~~i~~l~~s~d--~~~l~s~s~D~~v~vw~~~~~~~~--~~~~~~~h--~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
..|++++|+|+ +++|++|+.||.|++||+...... ......+| ...|++++|+ ++++|++++.|+.|++|++.
T Consensus 286 ~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 286 CDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999999 999999999999999999764311 22344566 7999999999 78899999999999999985
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-33 Score=287.73 Aligned_cols=296 Identities=17% Similarity=0.138 Sum_probs=214.1
Q ss_pred cccCCCCcEEEEECC-CCCEEEEEeCCCcEEEEcCCCCce-eeEEEeecccceeEEEECC-CCCEEEEEECCCCcceEEE
Q 007283 53 YGEHAYPATVARFSP-NGEWIASADVSGTVRIWGAHNDHV-LKKEFRVLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 53 ~~~h~~~v~~~~~sp-~g~~las~~~d~~i~vWd~~~~~~-~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~ 129 (609)
..+|...|+|++|+| ++++||+|+.||+|+|||+.+++. ....+.+|.+.|.+++|+| |+.+|++++.+. .+++
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~---~v~i 191 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG---TTRL 191 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS---CEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC---EEEE
Confidence 457888999999999 578999999999999999987653 2234567899999999998 688999887544 4778
Q ss_pred EEcCCCCeeEEEec--CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCC-EEEEE
Q 007283 130 FMWDSGTNVGEFDG--HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGS-KFISV 206 (609)
Q Consensus 130 ~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~ 206 (609)
|+++.+........ +...+.+++|+|++.. |++|+.|+.|++||... +....+.+|...|++++|+|++. +|+++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRM-VVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTE-EEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCE-EEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEe
Confidence 87765433222233 3345788999999984 99999999999999764 45567889999999999999987 78899
Q ss_pred eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCc-cce
Q 007283 207 SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGV-DDM 285 (609)
Q Consensus 207 ~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~ 285 (609)
+.|+.|++||.++.+....+....+|...|++++|+|++.+|++++.|++|++||+... .....+........ ...
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~ 346 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW---DCPLGLIPHPHRHFQHLT 346 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS---SSEEEECCCCCCCCSSSC
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC---ccceEEecccccccccce
Confidence 99999999999887766555444689999999999999999999999999999998742 22222211110000 000
Q ss_pred EEEEEEc--CCeEEEEE------------cCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEE
Q 007283 286 LVGCLWQ--NDFLVIVS------------LGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVK 351 (609)
Q Consensus 286 ~~~~~~~--~~~~~~~~------------~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~ 351 (609)
.+.+.|. ...++++. .++.|++|+............+|...|.++..+.+++.+|++|+ |++|++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~i 425 (435)
T 4e54_B 347 PIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILI 425 (435)
T ss_dssp CCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEE
T ss_pred eEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEE
Confidence 1111222 22333332 23579999876543222234578888888853344567888876 889999
Q ss_pred EecCcc
Q 007283 352 WIQGIG 357 (609)
Q Consensus 352 W~~~~~ 357 (609)
|+...+
T Consensus 426 W~~~~g 431 (435)
T 4e54_B 426 WSQQEA 431 (435)
T ss_dssp CCCC--
T ss_pred EECCcC
Confidence 987654
No 83
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-32 Score=267.97 Aligned_cols=248 Identities=20% Similarity=0.307 Sum_probs=204.0
Q ss_pred ccCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCC--ccccccccCCCCcEEEEECCC--CCEEEEEeCCCcEEEEcCC
Q 007283 13 STERGRGILISGHPKSNSILYTN-GRSVIILDLSNP--LQVSIYGEHAYPATVARFSPN--GEWIASADVSGTVRIWGAH 87 (609)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~--~~~~~~~~h~~~v~~~~~sp~--g~~las~~~d~~i~vWd~~ 87 (609)
..|.+....++++|+|+.|+++. ++.++||++.+. +....+.+|.+.|++++|+|+ |++||||+.|++|+|||+.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 35677778999999999998875 689999999743 456678999999999999874 9999999999999999998
Q ss_pred CCce-eeEEEeecccceeEEEECCC--CCEEEEEECCCCcceEEEEEcCCCC--eeEEEecCCccEEEEEEeeCC-----
Q 007283 88 NDHV-LKKEFRVLSGRIDDLQWSPD--GLRIVACGDGKGKSLVRAFMWDSGT--NVGEFDGHSRRVLSCAFKPSR----- 157 (609)
Q Consensus 88 ~~~~-~~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~p~~----- 157 (609)
+++. ....+..|...|.+++|+|+ |.+|++++.+. .+++|++..+. ....+.+|...|.+++|+|+.
T Consensus 86 ~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~---~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG---KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS---EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC---cEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 7642 23456778899999999998 88888887544 57788877653 245678999999999999973
Q ss_pred -------CeEEEEecCCCeEEEEeCCCCc----eeeeccCcccceEEEEEcCCC---CEEEEEeCCCcEEEEeCCCCcc-
Q 007283 158 -------PFRIATCGEDFLVNFYEGPPFK----FKLSHRGHSNFVNCVRFSPDG---SKFISVSSDKKGIIYDGKTADK- 222 (609)
Q Consensus 158 -------~~~i~t~~~d~~i~~~~~~~~~----~~~~~~~h~~~v~~l~~s~dg---~~l~s~~~d~~i~iwd~~~~~~- 222 (609)
...|++|+.|+.+++||....+ ....+.+|...|.+++|+|++ .+|++++.|++++|||......
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 2369999999999999976544 556788999999999999995 7899999999999999876431
Q ss_pred -ccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 223 -IGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 223 -~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
........+|...|.+++|+|++++|++++.|++|++|+..
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 11111123688899999999999999999999999999975
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=280.27 Aligned_cols=357 Identities=15% Similarity=0.146 Sum_probs=233.7
Q ss_pred EEEcCCCCeeEEEecCCccEEEEEEee-CCCeEEEEecCCCeEEEEeCCCCceeeec-------------cCcccceEEE
Q 007283 129 AFMWDSGTNVGEFDGHSRRVLSCAFKP-SRPFRIATCGEDFLVNFYEGPPFKFKLSH-------------RGHSNFVNCV 194 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~i~t~~~d~~i~~~~~~~~~~~~~~-------------~~h~~~v~~l 194 (609)
+|.++.......+.+|.+.|.+++|+| ++. .+++|+.|+.+++|+....+....+ .+|...|.++
T Consensus 27 v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 105 (408)
T 4a11_B 27 VLGLELNKDRDVERIHGGGINTLDIEPVEGR-YMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETV 105 (408)
T ss_dssp HHTEEECTTEEECCCCSSCEEEEEECTTTCC-EEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEE
T ss_pred eeccccCcceeeeeccCCcEEEEEEecCCCC-EEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEE
Confidence 444555566677889999999999999 776 5999999999999998766544333 3699999999
Q ss_pred EEcC-CCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCC---CeEEEEeCCCcEEEeecccCCCCce
Q 007283 195 RFSP-DGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDG---KQVLTASADKSAKVWDISEDNHGKL 270 (609)
Q Consensus 195 ~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~---~~l~s~s~d~~i~iwd~~~~~~~~~ 270 (609)
+|+| ++.+|++++.|+.+++||..+++....+ .+...+.++.|+|.+ .++++++.|+.|++||+... +.
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~ 178 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF----NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG---SC 178 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTTEEEEEE----ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS---CC
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCCccceec----cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc---ce
Confidence 9999 7779999999999999999998877665 366789999999854 49999999999999998621 11
Q ss_pred EEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEE
Q 007283 271 KKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIV 350 (609)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~ 350 (609)
...+.+|...|.++++++....++++++.||.|+
T Consensus 179 ----------------------------------------------~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~ 212 (408)
T 4a11_B 179 ----------------------------------------------SHILQGHRQEILAVSWSPRYDYILATASADSRVK 212 (408)
T ss_dssp ----------------------------------------------CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred ----------------------------------------------eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEE
Confidence 1234468889999999876556899999999999
Q ss_pred EEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecc
Q 007283 351 KWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDS 430 (609)
Q Consensus 351 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (609)
+|+......... .+ ....... ... .
T Consensus 213 i~d~~~~~~~~~---------~~-------------------~~~~~~~--~~~-------------~------------ 237 (408)
T 4a11_B 213 LWDVRRASGCLI---------TL-------------------DQHNGKK--SQA-------------V------------ 237 (408)
T ss_dssp EEETTCSSCCSE---------EC-------------------CTTTTCS--CCC-------------T------------
T ss_pred EEECCCCCcccc---------cc-------------------ccccccc--cee-------------e------------
Confidence 998754321000 00 0000000 000 0
Q ss_pred cEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEE---EecCCCceEEEEECCCCCEEE
Q 007283 431 GVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAV---LEKHRGAVSVIRYSPDVSMFA 507 (609)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~---~~~h~~~i~~v~~s~~~~~l~ 507 (609)
......+..++.+++++|+++++++|+.||.|++|++..+....... .......+........+..++
T Consensus 238 ---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T 4a11_B 238 ---------ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFV 308 (408)
T ss_dssp ---------TTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEE
T ss_pred ---------ccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEE
Confidence 00001123568899999999999999999999999998665321110 011112222233344556677
Q ss_pred EEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc
Q 007283 508 SGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT 587 (609)
Q Consensus 508 s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s 587 (609)
.++.|+.+++||+.+.+. +..+.+|...|++++|+|++++|++++.||.|++|++.... ..... ..+. ....+...
T Consensus 309 ~~~~~~~i~v~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~-~~~~~-~~~~-~~~~~~~~ 384 (408)
T 4a11_B 309 FVPYGSTIAVYTVYSGEQ-ITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE-PVPDD-DETT-TKSQLNPA 384 (408)
T ss_dssp EEEETTEEEEEETTTCCE-EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC----------------------
T ss_pred EEecCCEEEEEECcCCcc-eeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC-ccCCC-CceE-eccccccc
Confidence 778899999999887665 44577899999999999999999999999999999997643 11111 1111 11122222
Q ss_pred CCCeEEEEeCCCcEEEEEcc
Q 007283 588 DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 588 ~~~~l~s~s~D~~i~~W~~~ 607 (609)
.+..+.+.+.|+.+++|+..
T Consensus 385 ~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 385 FEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp --------------------
T ss_pred cceeecccCccCceeecCCc
Confidence 44556678899999999864
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-33 Score=275.08 Aligned_cols=253 Identities=21% Similarity=0.333 Sum_probs=194.9
Q ss_pred CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEe
Q 007283 230 DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFS 309 (609)
Q Consensus 230 ~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (609)
.+|.+.|++++|+|+|++|++++.|++|++||+... ...
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~---~~~-------------------------------------- 48 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG---GQI-------------------------------------- 48 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETT---EEE--------------------------------------
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC---CcE--------------------------------------
Confidence 489999999999999999999999999999997521 000
Q ss_pred CCCCCCCceeeeCCCCCeEEEEEec-CCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccce
Q 007283 310 ANDLEKSPLQLSGHMKNVTALTVLN-IDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNK 388 (609)
Q Consensus 310 ~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 388 (609)
....+.+|...|.+++|.+ .++.++++|+.|++|++|+...+.... .
T Consensus 49 ------~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~--------~------------------ 96 (316)
T 3bg1_A 49 ------LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK--------S------------------ 96 (316)
T ss_dssp ------EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE--------E------------------
T ss_pred ------EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE--------E------------------
Confidence 0123568999999999964 245799999999999999764321000 0
Q ss_pred EEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC--CCEEEEEe
Q 007283 389 IWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD--GSEAIIGS 466 (609)
Q Consensus 389 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--g~~l~~gs 466 (609)
.....+..++.+++++|+ +.++++|+
T Consensus 97 ----------------------------------------------------~~~~~h~~~V~~v~~~p~~~g~~lasgs 124 (316)
T 3bg1_A 97 ----------------------------------------------------HEHAGHDSSVNSVCWAPHDYGLILACGS 124 (316)
T ss_dssp ----------------------------------------------------EEECCCSSCCCEEEECCTTTCSCEEEEC
T ss_pred ----------------------------------------------------EEccCCCCceEEEEECCCCCCcEEEEEc
Confidence 000012345889999998 88999999
Q ss_pred CCCcEEEEEecCCe-eeeeEEEecCCCceEEEEECCC-----------------CCEEEEEeCCCeEEEEEccCCc--eE
Q 007283 467 QDGKLRVYSIRGDT-LTEEAVLEKHRGAVSVIRYSPD-----------------VSMFASGDVNREAIVWDRVSRE--VK 526 (609)
Q Consensus 467 ~dg~i~iw~~~~~~-~~~~~~~~~h~~~i~~v~~s~~-----------------~~~l~s~s~d~~v~iwd~~~~~--~~ 526 (609)
.|++|++|+++.+. ......+.+|...|.+++|+|+ +.+|++|+.|++|++||+.... ..
T Consensus 125 ~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~ 204 (316)
T 3bg1_A 125 SDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE 204 (316)
T ss_dssp SSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE
T ss_pred CCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccce
Confidence 99999999997652 2223455789999999999998 4799999999999999986442 23
Q ss_pred EeeecCCCCceEEEEECCCC----cEEEEEeCCCeEEEEEcCCCC--CcceeEeccccCCeEEEEEc-CCCeEEEEeCCC
Q 007283 527 LKNMLYHTARINCLAWSPNN----SMVATGSLDTCVIIYEIDKPA--SSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDA 599 (609)
Q Consensus 527 ~~~~~~h~~~i~~l~~s~d~----~~l~s~s~D~~v~vw~~~~~~--~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~ 599 (609)
...+.+|...|++++|+|++ ++||+++.|++|++|++.... ........+|...|++++|+ ++++|+++|.|+
T Consensus 205 ~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 205 EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp EECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred eeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 45577899999999999987 899999999999999987521 11123345789999999999 778999999999
Q ss_pred cEEEEEcc
Q 007283 600 CVRVWRLT 607 (609)
Q Consensus 600 ~i~~W~~~ 607 (609)
+|++|++.
T Consensus 285 ~v~lw~~~ 292 (316)
T 3bg1_A 285 KVTLWKES 292 (316)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEEC
Confidence 99999975
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-34 Score=286.98 Aligned_cols=324 Identities=11% Similarity=0.123 Sum_probs=236.1
Q ss_pred ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC
Q 007283 98 VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP 177 (609)
Q Consensus 98 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~ 177 (609)
.....|.+++|||||+++++++++. .++ +.... ..+++|...|.+++|+|++ .++.+.+|+.+.
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~---TV~--d~~~~---~~l~gh~~~v~~V~FsPdg--------~~~~~~~~~~~~ 76 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDI---SIG--QPKYA---KDINCNSKNLFHVKEFPLE--------FENKLDFELAQQ 76 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSE---EEE--EECCC---SCCSSBGGGTEEEEEECCC--------CCCTTTTSCCCS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCc---eee--ccccc---ceecCCCccEEEEEECCCC--------CcceEEEEeCCC
Confidence 3457899999999999999987654 344 43333 3457999999999999998 455555554331
Q ss_pred CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCc-----cceEEEEECCCCCeEEEEe
Q 007283 178 FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHK-----GSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 178 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~-----~~V~~l~~spd~~~l~s~s 252 (609)
. ....+ +|..+|.+++|||||++||+++.||++++||.+. .+..+ . |. ..|.+++|||||++|++|+
T Consensus 77 ~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l---~-~~~~~~~~sv~svafSPDG~~LAsgs 148 (588)
T 2j04_A 77 N-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL---D-SKGNLSSRTYHCFEWNPIESSIVVGN 148 (588)
T ss_dssp S-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC---C-CSSCSTTTCEEEEEECSSSSCEEEEE
T ss_pred c-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec---c-CCCccccccEEEEEEcCCCCEEEEEc
Confidence 1 12222 5688999999999999999999999999999544 33333 2 33 3699999999999999999
Q ss_pred CCCcEEEeecccCCCCc----eEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeE
Q 007283 253 ADKSAKVWDISEDNHGK----LKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVT 328 (609)
Q Consensus 253 ~d~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~ 328 (609)
.||+|++||+..+.... ...++. ....+|...|.
T Consensus 149 ~DGtVkIWd~~~~~l~~~~~i~l~ti~------------------------------------------~~~~gh~~~V~ 186 (588)
T 2j04_A 149 EDGELQFFSIRKNSENTPEFYFESSIR------------------------------------------LSDAGSKDWVT 186 (588)
T ss_dssp TTSEEEEEECCCCTTTCCCCEEEEEEE------------------------------------------CSCTTCCCCEE
T ss_pred CCCEEEEEECCCCccccccceeeeeee------------------------------------------cccccccccEE
Confidence 99999999986421000 011110 01246888999
Q ss_pred EEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccC
Q 007283 329 ALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIG 408 (609)
Q Consensus 329 ~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~ 408 (609)
+++|++. + +++++.|++|++|+...+....
T Consensus 187 sVawSPd-g--Laass~D~tVrlWd~~~~~~~~----------------------------------------------- 216 (588)
T 2j04_A 187 HIVWYED-V--LVAALSNNSVFSMTVSASSHQP----------------------------------------------- 216 (588)
T ss_dssp EEEEETT-E--EEEEETTCCEEEECCCSSSSCC-----------------------------------------------
T ss_pred EEEEcCC-c--EEEEeCCCeEEEEECCCCcccc-----------------------------------------------
Confidence 9999864 3 8899999999999764321000
Q ss_pred CCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe--ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEE
Q 007283 409 SQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI--NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAV 486 (609)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~ 486 (609)
....+ .++..|.+++|+ |+.+|+++ +++|++|++.++... ..
T Consensus 217 -------------------------------~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~--~~ 260 (588)
T 2j04_A 217 -------------------------------VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSIS--SL 260 (588)
T ss_dssp -------------------------------CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEE--EE
T ss_pred -------------------------------ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEE--EE
Confidence 00000 122457888888 68899887 699999999877652 22
Q ss_pred EecCCCceEEEEE--CCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 487 LEKHRGAVSVIRY--SPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 487 ~~~h~~~i~~v~~--s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
..+|.+.|..++| +||++.+++++.||+ ++|... .++|+||+..+++. |+++++|+..
T Consensus 261 ~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d-----------------~~~~spd~~l~a~~--d~~v~lW~~~ 320 (588)
T 2j04_A 261 KTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED-----------------ELHVTADNIIAPYL--EKKFKKWSTI 320 (588)
T ss_dssp ECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS-----------------SEEEECCCSSHHHH--HHHHHHTTTT
T ss_pred EcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec-----------------cEEECCCceEEEEc--CCEEEEEECC
Confidence 2289999999999 999999999999999 999753 26699999988765 9999999875
Q ss_pred CCCCcceeEeccccCCeEEEEEc-CCCeEEEEeC
Q 007283 565 KPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGE 597 (609)
Q Consensus 565 ~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~ 597 (609)
... ..... +...|++++|| |+..+++++.
T Consensus 321 g~~---l~~~~-~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 321 WNE---FNNYE-TTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp TTS---SSSSC-CEEEEEEEEECTTSSEEEEEEE
T ss_pred CCc---eeeec-cceEEEEEEECCCCCEEEEEEe
Confidence 321 22233 36779999999 6678887763
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-31 Score=273.78 Aligned_cols=284 Identities=20% Similarity=0.269 Sum_probs=218.9
Q ss_pred cEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeE
Q 007283 60 ATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG 139 (609)
Q Consensus 60 v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (609)
.+.++||++ ++||.|. |++|+|||..++++.. . .
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~-~-------------------------------------------~ 141 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ-L-------------------------------------------L 141 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEE-E-------------------------------------------E
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEE-E-------------------------------------------E
Confidence 566778765 4666654 7788888877765321 0 1
Q ss_pred EEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 007283 140 EFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 140 ~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
.+.+|...|++++|+|++.+ +++|+.|+.+++||..+++....+.+|...+.++.+ ++..|++|+.|+.+.+||...
T Consensus 142 ~~~~~~~~V~sv~fspdg~~-lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNY-LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred EecCCCCcEEEEEECCCCCE-EEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecc
Confidence 23456777888888888874 889999999999999999999999999999998877 467999999999999999876
Q ss_pred Cccc-cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEE
Q 007283 220 ADKI-GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVI 298 (609)
Q Consensus 220 ~~~~-~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (609)
.... ..+ .+|...+..+.|+|+++++++++.|+.+++|+.......
T Consensus 219 ~~~~~~~~---~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~------------------------------ 265 (420)
T 4gga_A 219 AEHHVATL---SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG------------------------------ 265 (420)
T ss_dssp SSCEEEEE---ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC------------------------------
T ss_pred cceeeEEe---cccccceeeeeecCCCCeeeeeeccccceEEeecccccc------------------------------
Confidence 5433 223 479999999999999999999999999999998632100
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEE--EecCCcEEEEecCccccceeccccccceeEeeee
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILS--SSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAI 376 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t--~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~ 376 (609)
.........|...|.++++++.++.++++ |+.|++|++|+..++..
T Consensus 266 ---------------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~----------------- 313 (420)
T 4gga_A 266 ---------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC----------------- 313 (420)
T ss_dssp ---------------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE-----------------
T ss_pred ---------------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc-----------------
Confidence 00112345688889999998777777765 45899999997643210
Q ss_pred CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEc
Q 007283 377 EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIA 456 (609)
Q Consensus 377 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 456 (609)
...+.....+.++.++
T Consensus 314 ----------------------------------------------------------------~~~~~~~~~v~~~~~~ 329 (420)
T 4gga_A 314 ----------------------------------------------------------------LSAVDAHSQVCSILWS 329 (420)
T ss_dssp ----------------------------------------------------------------EEEEECSSCEEEEEEE
T ss_pred ----------------------------------------------------------------ceeeccccceeeeeec
Confidence 0011112346777889
Q ss_pred CCCCEEEEEe--CCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q 007283 457 PDGSEAIIGS--QDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSR 523 (609)
Q Consensus 457 p~g~~l~~gs--~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~ 523 (609)
|+++.+++++ .|+.|++||+.++.. ...+.+|.+.|.+|+|+|||++|+||+.|++|++||+...
T Consensus 330 ~~~~~lv~~sg~~d~~I~iwd~~~~~~--v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 330 PHYKELISGHGFAQNQLVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCCCeEEEEEecCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 9999988765 799999999987654 4678899999999999999999999999999999997653
No 88
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.3e-31 Score=274.03 Aligned_cols=281 Identities=19% Similarity=0.335 Sum_probs=218.6
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCC
Q 007283 189 NFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHG 268 (609)
Q Consensus 189 ~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~ 268 (609)
.+++.|+|++++ .||+|. |++|+|||..+++....+. ..+|...|++++|+|+|++|++|+.|++|++||+.. +
T Consensus 106 ~y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~-~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~---~ 179 (420)
T 4gga_A 106 YYLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ---Q 179 (420)
T ss_dssp TTCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTT---T
T ss_pred ccceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEE-ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC---C
Confidence 357889999864 676664 8999999999998776553 247888999999999999999999999999999862 2
Q ss_pred ceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCc
Q 007283 269 KLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGL 348 (609)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~ 348 (609)
+.. ..+.+|...+.++.+. +.++++|+.|+.
T Consensus 180 ~~~----------------------------------------------~~~~~h~~~v~~~s~~---~~~l~sgs~d~~ 210 (420)
T 4gga_A 180 KRL----------------------------------------------RNMTSHSARVGSLSWN---SYILSSGSRSGH 210 (420)
T ss_dssp EEE----------------------------------------------EEECCCSSCEEEEEEE---TTEEEEEETTSE
T ss_pred cEE----------------------------------------------EEEeCCCCceEEEeeC---CCEEEEEeCCCc
Confidence 221 1234677888887764 478999999999
Q ss_pred EEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEe
Q 007283 349 IVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVST 428 (609)
Q Consensus 349 i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (609)
+++|+...... .+ .
T Consensus 211 i~~~d~~~~~~---------~~-------------------~-------------------------------------- 224 (420)
T 4gga_A 211 IHHHDVRVAEH---------HV-------------------A-------------------------------------- 224 (420)
T ss_dssp EEEEETTSSSC---------EE-------------------E--------------------------------------
T ss_pred eeEeeecccce---------ee-------------------E--------------------------------------
Confidence 99997532110 00 0
Q ss_pred cccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCee--eeeEEEecCCCceEEEEECCCCC-E
Q 007283 429 DSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTL--TEEAVLEKHRGAVSVIRYSPDVS-M 505 (609)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~--~~~~~~~~h~~~i~~v~~s~~~~-~ 505 (609)
....+...+..+.++|+++++++++.|+.+++|+...+.. ........|.+.|.+++|+|++. +
T Consensus 225 -------------~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 225 -------------TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp -------------EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred -------------EecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 0001223467788999999999999999999999876542 12345678999999999999764 4
Q ss_pred EEE--EeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEe--CCCeEEEEEcCCCCCcceeEeccccCCe
Q 007283 506 FAS--GDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGS--LDTCVIIYEIDKPASSRMTIKGAHLGGV 581 (609)
Q Consensus 506 l~s--~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s--~D~~v~vw~~~~~~~~~~~~~~~h~~~v 581 (609)
+++ |+.|++|++||+.++.... .+ .+...+.++.|+|+++.+++++ .|++|+|||+... ..+..+.+|.+.|
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~-~~-~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~--~~v~~l~gH~~~V 367 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLS-AV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM--AKVAELKGHTSRV 367 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEE-EE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC--CEEEEECCCSSCE
T ss_pred EEEEeecCCCEEEEEeCCccccce-ee-ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC--cEEEEEcCCCCCE
Confidence 444 5689999999998776533 23 3556899999999999988765 7999999999764 3455667899999
Q ss_pred EEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 582 YGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 582 ~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
++++|+ ++++|+|+|.|++|++|++.
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 999999 78899999999999999984
No 89
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2.2e-30 Score=294.63 Aligned_cols=514 Identities=12% Similarity=0.098 Sum_probs=336.6
Q ss_pred CceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCC------CcEEEEcCCCCc
Q 007283 17 GRGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVS------GTVRIWGAHNDH 90 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d------~~i~vWd~~~~~ 90 (609)
+......++| +.|++.....+.+|++.+++.. .+.+|.+.+.+++|||||++||+++.+ .+|.+|++.+++
T Consensus 15 ~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~~~-~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~ 91 (1045)
T 1k32_A 15 NLLLNPDIHG--DRIIFVCCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 91 (1045)
T ss_dssp CCCEEEEEET--TEEEEEETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred ceEeCcEEeC--CEEEEEECCcEEEEECCCCcEE-EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC
Confidence 3444666775 5888887789999999877654 577899999999999999999987543 379999988765
Q ss_pred eeeEEEeecccce-------eEEEECCCCCEEEEEECCC--CcceEEEEEcCCC-CeeEEEecCCccEEEEEEeeCCCeE
Q 007283 91 VLKKEFRVLSGRI-------DDLQWSPDGLRIVACGDGK--GKSLVRAFMWDSG-TNVGEFDGHSRRVLSCAFKPSRPFR 160 (609)
Q Consensus 91 ~~~~~~~~~~~~v-------~~~~~spdg~~l~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (609)
...+..|...+ ..++|||||+ ++.+++.. .....++|.|+.. .....+..+. ...++|+| + +
T Consensus 92 --~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--~~~~~~sp-G--~ 163 (1045)
T 1k32_A 92 --IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGP--ATHILFAD-G--R 163 (1045)
T ss_dssp --EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCS--CSEEEEET-T--E
T ss_pred --eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCC--cceeeeCC-C--E
Confidence 34567777777 8999999999 44444321 1122346666532 2223333332 34567999 6 5
Q ss_pred EEEecC------------CCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CccccccC
Q 007283 161 IATCGE------------DFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT-ADKIGELS 227 (609)
Q Consensus 161 i~t~~~------------d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~-~~~~~~~~ 227 (609)
+++++. +....+|..........+.+|...+.++.|+++ ..+++++.|+.+.||.... +.....+.
T Consensus 164 l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~ 242 (1045)
T 1k32_A 164 RVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT 242 (1045)
T ss_dssp EEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred EEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec
Confidence 777642 223455532221233345789999999999998 5666777889999997543 32333332
Q ss_pred cCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCC------ccceEEEEEEc---CCeEEE
Q 007283 228 PEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGG------VDDMLVGCLWQ---NDFLVI 298 (609)
Q Consensus 228 ~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~~ 298 (609)
.|. .+...+|+|||++|+.+. ++.|++|++. ..++. .+....... ....+..+.|+ +..++.
T Consensus 243 ---~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~---~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~ 313 (1045)
T 1k32_A 243 ---SFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPD---TEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAF 313 (1045)
T ss_dssp ---CCC-SSCEEEEEESSSCEEEEE-TTEEEEECTT---TCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEE
T ss_pred ---CCC-CcceeeEcCCCCEEEEEe-CCEEEEecCC---ceEee-eeccCcccccccccccccccceeeecCCCCCEEEE
Confidence 333 466789999999999885 8999999983 22232 322111000 00011223333 445666
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeCCCC-CeEEEEEecCCCCEEEEEecCCcEE-EEecCccccceeccccccceeEeee-
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSGHMK-NVTALTVLNIDPKVILSSSYDGLIV-KWIQGIGYGGKLQRKENSQIKCFAA- 375 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~t~s~dg~i~-~W~~~~~~~~~~~~~~~~~~~~~~~- 375 (609)
++ ++.+.+|+.... ....+..|.. .+..++|+ +++.++.++.++.+. +|+...+...... .+...+..+.+
T Consensus 314 ~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~S 387 (1045)
T 1k32_A 314 VS-RGQAFIQDVSGT--YVLKVPEPLRIRYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVD 387 (1045)
T ss_dssp EE-TTEEEEECTTSS--BEEECSCCSCEEEEEECSS--SEEEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEEC
T ss_pred EE-cCEEEEEcCCCC--ceEEccCCCcceEEeeeEc--CCCeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEEC
Confidence 55 788899886543 2344566777 77788776 567788888887787 7877654322222 22233444444
Q ss_pred -eCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe-ccCCceeEE
Q 007283 376 -IEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTAS 453 (609)
Q Consensus 376 -~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 453 (609)
.+..++.+..++.+++|++..... .... .+...+..+
T Consensus 388 pDG~~la~~~~~~~v~~~d~~tg~~-----------------------------------------~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 388 RNGKFAVVANDRFEIMTVDLETGKP-----------------------------------------TVIERSREAMITDF 426 (1045)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCE-----------------------------------------EEEEECSSSCCCCE
T ss_pred CCCCEEEEECCCCeEEEEECCCCce-----------------------------------------EEeccCCCCCccce
Confidence 345566777777788777644321 1111 123456788
Q ss_pred EEcCCCCEEEEEeCCC----------cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q 007283 454 AIAPDGSEAIIGSQDG----------KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSR 523 (609)
Q Consensus 454 ~~sp~g~~l~~gs~dg----------~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~ 523 (609)
+++|||++++.++.++ .|++||+.++.. ..+..|...+..++|+|||++++.++.++..+.|+....
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~---~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI---FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE---EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE---EEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 9999999999887754 899999987652 456678888999999999999999998777777753221
Q ss_pred ce------------------------------------------EEeeecCCCCceEEEEECCCCcEEEE----------
Q 007283 524 EV------------------------------------------KLKNMLYHTARINCLAWSPNNSMVAT---------- 551 (609)
Q Consensus 524 ~~------------------------------------------~~~~~~~h~~~i~~l~~s~d~~~l~s---------- 551 (609)
.. .+..+..|...+..++++||++++++
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~ 583 (1045)
T 1k32_A 504 NFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 583 (1045)
T ss_dssp CEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHH
T ss_pred ccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccc
Confidence 11 01122346677999999999998875
Q ss_pred ---EeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEccC
Q 007283 552 ---GSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 552 ---~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~ 608 (609)
...+..|.+||+.... ...+ . ..+.+++|| |++.|++++.| .+++|++..
T Consensus 584 ~~~~~~~~~l~~~d~~~~~--~~~l-~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~ 637 (1045)
T 1k32_A 584 YQGAPEKGVLLKYDVKTRK--VTEV-K---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLE 637 (1045)
T ss_dssp HHCCCCCEEEEEEETTTCC--EEEE-E---EEEEEEEECTTSCEEEEEETT-SCEEEEESS
T ss_pred ccccCCCceEEEEECCCCc--EEEe-e---cCcceEEECCCCCEEEEEcCC-cEEEEeCcc
Confidence 1234567777776533 1222 2 568899999 88899988877 899999854
No 90
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6e-32 Score=275.30 Aligned_cols=312 Identities=18% Similarity=0.250 Sum_probs=238.1
Q ss_pred EEEEEeCCCCccccccccCCCCcEEEEECC-CCCEEEEEeCCCcEEEEcCCCCceeeEEE------------eeccccee
Q 007283 38 SVIILDLSNPLQVSIYGEHAYPATVARFSP-NGEWIASADVSGTVRIWGAHNDHVLKKEF------------RVLSGRID 104 (609)
Q Consensus 38 ~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~las~~~d~~i~vWd~~~~~~~~~~~------------~~~~~~v~ 104 (609)
.+.+|++...+....+.+|++.|++++|+| +|++||+++.||+|+|||+.+.+...... ..|...|.
T Consensus 24 ~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 103 (408)
T 4a11_B 24 TRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE 103 (408)
T ss_dssp HHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE
T ss_pred cceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE
Confidence 455677766666677889999999999999 99999999999999999998765322111 13888999
Q ss_pred EEEECC-CCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCC--eEEEEecCCCeEEEEeCCCCcee
Q 007283 105 DLQWSP-DGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRP--FRIATCGEDFLVNFYEGPPFKFK 181 (609)
Q Consensus 105 ~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~i~t~~~d~~i~~~~~~~~~~~ 181 (609)
+++|+| ++.+|++++.+. .+++|+.+.+.....+. +...+.++.++|.+. ..+++++.|+.+.+||....+..
T Consensus 104 ~~~~~~~~~~~l~s~~~d~---~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSSFDK---TLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp EEEECTTCTTCEEEEETTS---EEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred EEEEccCCCcEEEEEeCCC---eEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 999999 677888877443 57788887777666665 677899999998643 26999999999999999988888
Q ss_pred eeccCcccceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcc-cccc------------CcCCCCccceEEEEECCCCCe
Q 007283 182 LSHRGHSNFVNCVRFSPDGS-KFISVSSDKKGIIYDGKTADK-IGEL------------SPEDGHKGSVYAVSWSPDGKQ 247 (609)
Q Consensus 182 ~~~~~h~~~v~~l~~s~dg~-~l~s~~~d~~i~iwd~~~~~~-~~~~------------~~~~~h~~~V~~l~~spd~~~ 247 (609)
..+.+|...|.+++|+|+++ +|++++.|+.+++||.+++.. +..+ ....+|.+.|.+++|+|++++
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 259 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLH 259 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCE
Confidence 88999999999999999998 589999999999999876651 1111 111468899999999999999
Q ss_pred EEEEeCCCcEEEeecccCCCCceEEEeccC-CCCCccceEEEE-EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCC
Q 007283 248 VLTASADKSAKVWDISEDNHGKLKKTLTPS-GSGGVDDMLVGC-LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMK 325 (609)
Q Consensus 248 l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~ 325 (609)
|++++.|+.|++||+..... ....... ............ ......+++++.++.+++|+.... .....+.+|..
T Consensus 260 l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~-~~~~~~~~~~~ 335 (408)
T 4a11_B 260 LLTVGTDNRMRLWNSSNGEN---TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG-EQITMLKGHYK 335 (408)
T ss_dssp EEEEETTSCEEEEETTTCCB---CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC-CEEEEECCCSS
T ss_pred EEEecCCCeEEEEECCCCcc---ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC-cceeeeccCCC
Confidence 99999999999999874321 1111100 000001111111 112456777888999999998653 34456789999
Q ss_pred CeEEEEEecCCCCEEEEEecCCcEEEEecCccc
Q 007283 326 NVTALTVLNIDPKVILSSSYDGLIVKWIQGIGY 358 (609)
Q Consensus 326 ~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~ 358 (609)
.|.++++++ ++.++++++.||.|++|+.....
T Consensus 336 ~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 336 TVDCCVFQS-NFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp CEEEEEEET-TTTEEEEEETTSCEEEEEECC--
T ss_pred eEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCC
Confidence 999999985 45799999999999999887653
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.7e-32 Score=270.93 Aligned_cols=288 Identities=11% Similarity=0.142 Sum_probs=222.5
Q ss_pred ccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeec
Q 007283 184 HRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDI 262 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~ 262 (609)
..+|...|++++|+|++++|++++.|+.+++|+..+++.........+|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 457999999999999999999999999999999887761111111236899999999999999 9999999999999998
Q ss_pred -ccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeC--CCCCeEEEEEecCCCCE
Q 007283 263 -SEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSG--HMKNVTALTVLNIDPKV 339 (609)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~ 339 (609)
... +. ..+.+ |...|.++++++ +..
T Consensus 87 ~~~~---~~-----------------------------------------------~~~~~~~~~~~v~~l~~~~--~~~ 114 (342)
T 1yfq_A 87 IGSP---SF-----------------------------------------------QALTNNEANLGICRICKYG--DDK 114 (342)
T ss_dssp SSSS---SE-----------------------------------------------EECBSCCCCSCEEEEEEET--TTE
T ss_pred ccCC---ce-----------------------------------------------EeccccCCCCceEEEEeCC--CCE
Confidence 521 11 12335 888999999987 679
Q ss_pred EEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeecc
Q 007283 340 ILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH 419 (609)
Q Consensus 340 ~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (609)
+++++.|+.|++|+.......... . . .
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~-----------~-------~-------------~---------------------- 141 (342)
T 1yfq_A 115 LIAASWDGLIEVIDPRNYGDGVIA-----------V-------K-------------N---------------------- 141 (342)
T ss_dssp EEEEETTSEEEEECHHHHTTBCEE-----------E-------E-------------E----------------------
T ss_pred EEEEcCCCeEEEEccccccccccc-----------c-------c-------------C----------------------
Confidence 999999999999976421000000 0 0 0
Q ss_pred CCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecC-CeeeeeEEEecCCCceEEEE
Q 007283 420 YPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRG-DTLTEEAVLEKHRGAVSVIR 498 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~-~~~~~~~~~~~h~~~i~~v~ 498 (609)
.....+.+...+.+++++|++ +++++.|+.|++|+++. ...........|...|.+++
T Consensus 142 -------------------~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 142 -------------------LNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA 200 (342)
T ss_dssp -------------------SCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE
T ss_pred -------------------CeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE
Confidence 000001122457888999887 99999999999999986 43322345567889999999
Q ss_pred ECC-CCCEEEEEeCCCeEEEEEccCC-----ceEEeeecCCCC---------ceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 499 YSP-DVSMFASGDVNREAIVWDRVSR-----EVKLKNMLYHTA---------RINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 499 ~s~-~~~~l~s~s~d~~v~iwd~~~~-----~~~~~~~~~h~~---------~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
|+| ++.++++++.|+.+++|++... ......+..|.. .|++++|+|++++|++++.||.|++||+
T Consensus 201 ~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 201 LLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp ECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred ECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 999 9999999999999999998765 122334555654 9999999999999999999999999999
Q ss_pred CCCCCcceeEeccc-cCCeEEEEEcCCCeEEEEeCCCc
Q 007283 564 DKPASSRMTIKGAH-LGGVYGLAFTDEHSVVSSGEDAC 600 (609)
Q Consensus 564 ~~~~~~~~~~~~~h-~~~v~~~~~s~~~~l~s~s~D~~ 600 (609)
.... .+....+| ...|++++ .++++|+++|.|+.
T Consensus 281 ~~~~--~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 281 QTRK--KIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTTE--EEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred ccHh--HhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 7643 34445667 99999999 88899999999999
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-31 Score=272.42 Aligned_cols=285 Identities=18% Similarity=0.288 Sum_probs=222.3
Q ss_pred cCcccc--eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 185 RGHSNF--VNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 185 ~~h~~~--v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
.+|... +.++.|++ ..+++++.|+.+++||..+++....+. ..|.+.|.+++|+|++++|++++.||.|++||+
T Consensus 88 ~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~--~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAE--TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEE--CCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeee--cCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 355543 55667765 458889999999999999988766553 248889999999999999999999999999998
Q ss_pred ccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEE
Q 007283 263 SEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILS 342 (609)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t 342 (609)
.. ++.. ..+.+|...|.++.+. +..+++
T Consensus 164 ~~---~~~~----------------------------------------------~~~~~~~~~v~~~~~~---~~~l~~ 191 (401)
T 4aez_A 164 ES---QTKL----------------------------------------------RTMAGHQARVGCLSWN---RHVLSS 191 (401)
T ss_dssp TT---CCEE----------------------------------------------EEECCCSSCEEEEEEE---TTEEEE
T ss_pred cC---CeEE----------------------------------------------EEecCCCCceEEEEEC---CCEEEE
Confidence 62 1111 1234688888898883 379999
Q ss_pred EecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCc
Q 007283 343 SSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPE 422 (609)
Q Consensus 343 ~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (609)
++.||.|++|+...... .+
T Consensus 192 ~~~dg~i~i~d~~~~~~---------~~---------------------------------------------------- 210 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANH---------QI---------------------------------------------------- 210 (401)
T ss_dssp EETTSEEEEEETTSSSC---------EE----------------------------------------------------
T ss_pred EcCCCCEEEEecccCcc---------ee----------------------------------------------------
Confidence 99999999997642100 00
Q ss_pred EEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC
Q 007283 423 LVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD 502 (609)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~ 502 (609)
.....+...+.+++++|+++++++|+.|+.|++||+..+.. ...+..|...|.+++|+|+
T Consensus 211 ------------------~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 211 ------------------GTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP--KFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp ------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE--EEEECCCSSCCCEEEECTT
T ss_pred ------------------eEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc--cEEecCCcceEEEEEECCC
Confidence 00011234688899999999999999999999999986544 3567789999999999997
Q ss_pred C-CEEEEEe--CCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEE--EeCCCeEEEEEcCCCCCcceeEeccc
Q 007283 503 V-SMFASGD--VNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVAT--GSLDTCVIIYEIDKPASSRMTIKGAH 577 (609)
Q Consensus 503 ~-~~l~s~s--~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s--~s~D~~v~vw~~~~~~~~~~~~~~~h 577 (609)
+ .++++++ .|+.+++||+.+.+... .+ .|...|++++|+|++++|++ |+.|+.|++|++............+|
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~-~~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVN-TV-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEE-EE-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEE-EE-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 6 5666655 79999999988765432 23 47788999999999999999 44899999999976432233335689
Q ss_pred cCCeEEEEEc-CCCeEEEEeCCCcEEEEEccC
Q 007283 578 LGGVYGLAFT-DEHSVVSSGEDACVRVWRLTP 608 (609)
Q Consensus 578 ~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~~ 608 (609)
.+.|.+++|+ ++.+|++++.|+.|++|++..
T Consensus 349 ~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 349 DTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp SSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 9999999999 788999999999999999853
No 93
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.1e-31 Score=260.35 Aligned_cols=284 Identities=20% Similarity=0.319 Sum_probs=219.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCc
Q 007283 190 FVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGK 269 (609)
Q Consensus 190 ~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~ 269 (609)
+.++|+||+++ .||+| .|++|+|||..+++.+..+. ..+|...|++++|+|++++|++|+.|++|++||+.. ++
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~-~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~---~~ 100 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQ-MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ---QK 100 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEE-CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT---TE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEE-ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC---ce
Confidence 46789999986 66655 59999999999998877664 247888999999999999999999999999999873 55
Q ss_pred eEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcE
Q 007283 270 LKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLI 349 (609)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i 349 (609)
....+... ........+.+..+++++.++.+++|...........+.+|...+..+.+.. .+..+++++.|++|
T Consensus 101 ~~~~~~~h-----~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 101 RLRNMTSH-----SARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLV 174 (318)
T ss_dssp EEEEEECC-----SSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eEEEecCc-----cceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcce
Confidence 55555422 1233445567889999999999999987766656667889999999988864 45789999999999
Q ss_pred EEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEec
Q 007283 350 VKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTD 429 (609)
Q Consensus 350 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (609)
++|+...+.......
T Consensus 175 ~iwd~~~~~~~~~~~----------------------------------------------------------------- 189 (318)
T 4ggc_A 175 NVWPSAPGEGGWVPL----------------------------------------------------------------- 189 (318)
T ss_dssp EEEESSCBTTBSCCS-----------------------------------------------------------------
T ss_pred eEEECCCCcccccce-----------------------------------------------------------------
Confidence 999875432110000
Q ss_pred ccEEEeeCCeeeEEeccCCceeEEEEcCCCCE---EEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEE
Q 007283 430 SGVVLLRGAEVVSTINLRFPVTASAIAPDGSE---AIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMF 506 (609)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~---l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l 506 (609)
.........+.+++++|++.. +++|+.+++|++|+...... .....+...+..+.|+|++..+
T Consensus 190 -----------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~~ 255 (318)
T 4ggc_A 190 -----------QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC---LSAVDAHSQVCSILWSPHYKEL 255 (318)
T ss_dssp -----------EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE---EEEEECSSCEEEEEEETTTTEE
T ss_pred -----------eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc---cccccceeeeeeeeecccccce
Confidence 000011134566677776553 35678899999999876654 2345677889999999999988
Q ss_pred EEEe--CCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 507 ASGD--VNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 507 ~s~s--~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
++++ .|++|++||+.+.+. +..+.+|...|++++|+||+++||||+.|++|+|||+..
T Consensus 256 ~~~sg~~d~~i~iwd~~~~~~-~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 256 ISGHGFAQNQLVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEECTTTCCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEcCCCEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 7654 899999999887765 456789999999999999999999999999999999853
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-32 Score=270.25 Aligned_cols=256 Identities=18% Similarity=0.263 Sum_probs=197.9
Q ss_pred cccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCc-eeeEEEeecccceeEEEECC--CCCEEEEEECCCCcceE
Q 007283 51 SIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDH-VLKKEFRVLSGRIDDLQWSP--DGLRIVACGDGKGKSLV 127 (609)
Q Consensus 51 ~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~-~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~ 127 (609)
..+.+|++.|++++|+|+|++||+|+.|++|+|||+.+++ .+...+.+|.+.|.+++|+| ++++|++++.+. .+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~---~v 83 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR---KV 83 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS---CE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC---EE
Confidence 3467899999999999999999999999999999998764 24467889999999999986 488999888654 36
Q ss_pred EEEEcCCC--CeeEEEecCCccEEEEEEeeCC-CeEEEEecCCCeEEEEeCCCCc---eeeeccCcccceEEEEEcCC--
Q 007283 128 RAFMWDSG--TNVGEFDGHSRRVLSCAFKPSR-PFRIATCGEDFLVNFYEGPPFK---FKLSHRGHSNFVNCVRFSPD-- 199 (609)
Q Consensus 128 ~~~~~~~~--~~~~~~~~h~~~v~~~~~~p~~-~~~i~t~~~d~~i~~~~~~~~~---~~~~~~~h~~~v~~l~~s~d-- 199 (609)
++|+...+ .....+.+|...|.+++|+|++ ...+++|+.|+.+++|+..... ....+.+|...|.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 163 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVV 163 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccC
Confidence 67766655 3566788999999999999983 2359999999999999976542 24556789999999999998
Q ss_pred ---------------CCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCC----CeEEEEeCCCcEEEe
Q 007283 200 ---------------GSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDG----KQVLTASADKSAKVW 260 (609)
Q Consensus 200 ---------------g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~----~~l~s~s~d~~i~iw 260 (609)
+++|++|+.|++|++||.+............+|.+.|.+++|+|++ .+|++++.|++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 164 PGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp C------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred CccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 4689999999999999987543211122235899999999999987 789999999999999
Q ss_pred ecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEE
Q 007283 261 DISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVI 340 (609)
Q Consensus 261 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 340 (609)
++......+ .....+.+|...|.+++|++ ++.++
T Consensus 244 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~v~~v~~sp-~g~~l 277 (316)
T 3bg1_A 244 TCDDASSNT---------------------------------------------WSPKLLHKFNDVVWHVSWSI-TANIL 277 (316)
T ss_dssp ECSSTTCCC---------------------------------------------CBCCEEEECSSCEEEEEECT-TTCCE
T ss_pred EccCccccc---------------------------------------------hhhhhhhcCCCcEEEEEEcC-CCCEE
Confidence 975311000 00112345778899999875 45789
Q ss_pred EEEecCCcEEEEecC
Q 007283 341 LSSSYDGLIVKWIQG 355 (609)
Q Consensus 341 ~t~s~dg~i~~W~~~ 355 (609)
++++.|++|++|+..
T Consensus 278 as~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 278 AVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEESSSCEEEEEEC
T ss_pred EEEcCCCeEEEEEEC
Confidence 999999999999754
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.2e-31 Score=257.01 Aligned_cols=284 Identities=19% Similarity=0.267 Sum_probs=216.1
Q ss_pred cEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeE
Q 007283 60 ATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG 139 (609)
Q Consensus 60 v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (609)
.++++|||++ +||+| .|++|+|||+.+++++. .+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~-~~------------------------------------------- 61 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQ-LL------------------------------------------- 61 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEE-EE-------------------------------------------
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEE-EE-------------------------------------------
Confidence 5789999987 77776 59999999998876432 11
Q ss_pred EEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 007283 140 EFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 140 ~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
.+.+|...|.+++|+|++.+ +++|+.|+.+++|+.++++....+.+|...+.++.+ ++..+++++.++.+++|+...
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~-l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~ 138 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNY-LAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRV 138 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS
T ss_pred EecCCCCeEEEEEECCCCCE-EEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCC
Confidence 13356777888888888874 889999999999999999999999999988876555 567899999999999999776
Q ss_pred CccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEE
Q 007283 220 ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIV 299 (609)
Q Consensus 220 ~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (609)
....... ..+|...+..+.|++++++|++++.|++|++||+.......
T Consensus 139 ~~~~~~~--~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~------------------------------ 186 (318)
T 4ggc_A 139 AEHHVAT--LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW------------------------------ 186 (318)
T ss_dssp SSCEEEE--EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS------------------------------
T ss_pred CceeEEE--EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc------------------------------
Confidence 5443221 24789999999999999999999999999999986321100
Q ss_pred EcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEE--EEEecCCcEEEEecCccccceeccccccceeEeeeeC
Q 007283 300 SLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVI--LSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE 377 (609)
Q Consensus 300 ~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~--~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (609)
........|...|..+.+.+.++.++ ++++.+++|++|+......
T Consensus 187 ---------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~------------------ 233 (318)
T 4ggc_A 187 ---------------VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC------------------ 233 (318)
T ss_dssp ---------------CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE------------------
T ss_pred ---------------cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc------------------
Confidence 00122334666777777775555554 4677889999996532110
Q ss_pred CcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcC
Q 007283 378 EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAP 457 (609)
Q Consensus 378 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 457 (609)
.........+..+.++|
T Consensus 234 ---------------------------------------------------------------~~~~~~~~~v~~~~~~~ 250 (318)
T 4ggc_A 234 ---------------------------------------------------------------LSAVDAHSQVCSILWSP 250 (318)
T ss_dssp ---------------------------------------------------------------EEEEECSSCEEEEEEET
T ss_pred ---------------------------------------------------------------cccccceeeeeeeeecc
Confidence 00001123466778899
Q ss_pred CCCEEEEEe--CCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccC
Q 007283 458 DGSEAIIGS--QDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVS 522 (609)
Q Consensus 458 ~g~~l~~gs--~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~ 522 (609)
++..+++++ .|+.|++||++++.. ...+.+|.+.|++++|+|||++|+||+.|++|++||+..
T Consensus 251 ~~~~~~~~sg~~d~~i~iwd~~~~~~--~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 251 HYKELISGHGFAQNQLVIWKYPTMAK--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cccceEEEEEcCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 999887765 799999999987765 467889999999999999999999999999999999754
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.1e-31 Score=261.73 Aligned_cols=289 Identities=12% Similarity=0.117 Sum_probs=224.6
Q ss_pred ccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEE
Q 007283 52 IYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFM 131 (609)
Q Consensus 52 ~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~ 131 (609)
...+|.+.|++++|+|+|++||+++.|++|+||++.+++....
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~------------------------------------- 48 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD------------------------------------- 48 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE-------------------------------------
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc-------------------------------------
Confidence 3458999999999999999999999999999999876531100
Q ss_pred cCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeC-CCCceeeeccC--cccceEEEEEcCCCCEEEEEeC
Q 007283 132 WDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEG-PPFKFKLSHRG--HSNFVNCVRFSPDGSKFISVSS 208 (609)
Q Consensus 132 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~-~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~~~ 208 (609)
...+.+|...|.+++|+|++...+++|+.|+.+++|+. ...+. ..+.+ |...|.+++|+| ++.|++++.
T Consensus 49 ------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~ 120 (342)
T 1yfq_A 49 ------LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASW 120 (342)
T ss_dssp ------EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEET
T ss_pred ------ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcC
Confidence 01123677788889999987624888999999999998 76654 56777 999999999999 999999999
Q ss_pred CCcEEEEeCCC---------CccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCC
Q 007283 209 DKKGIIYDGKT---------ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGS 279 (609)
Q Consensus 209 d~~i~iwd~~~---------~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~ 279 (609)
|+.+++||.++ ++.+..+ .|.+.|.+++|+|++ +++++.|+.|++||+... +...
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~--~~~~-------- 184 (342)
T 1yfq_A 121 DGLIEVIDPRNYGDGVIAVKNLNSNNT----KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLC--EDDN-------- 184 (342)
T ss_dssp TSEEEEECHHHHTTBCEEEEESCSSSS----SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCC--TTCC--------
T ss_pred CCeEEEEcccccccccccccCCeeeEE----eeCCceEEEEecCCc--EEEEeCCCeEEEEECCcc--cccc--------
Confidence 99999999877 6655544 378899999999988 999999999999997520 0000
Q ss_pred CCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCcccc
Q 007283 280 GGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYG 359 (609)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~ 359 (609)
.......|.
T Consensus 185 ------------------------------------~~~~~~~~~----------------------------------- 193 (342)
T 1yfq_A 185 ------------------------------------GTIEESGLK----------------------------------- 193 (342)
T ss_dssp ------------------------------------CEEEECSCS-----------------------------------
T ss_pred ------------------------------------ceeeecCCC-----------------------------------
Confidence 000000011
Q ss_pred ceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCe
Q 007283 360 GKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAE 439 (609)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (609)
T Consensus 194 -------------------------------------------------------------------------------- 193 (342)
T 1yfq_A 194 -------------------------------------------------------------------------------- 193 (342)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEeccCCceeEEEEcC-CCCEEEEEeCCCcEEEEEecCC--e--eeeeEEEecCCC---------ceEEEEECCCCCE
Q 007283 440 VVSTINLRFPVTASAIAP-DGSEAIIGSQDGKLRVYSIRGD--T--LTEEAVLEKHRG---------AVSVIRYSPDVSM 505 (609)
Q Consensus 440 ~~~~~~~~~~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~--~--~~~~~~~~~h~~---------~i~~v~~s~~~~~ 505 (609)
.++.+++++| +++++++|+.||.|++|+++.. . ......+..|.. .|.+++|+|++.+
T Consensus 194 --------~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 265 (342)
T 1yfq_A 194 --------YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265 (342)
T ss_dssp --------SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCC
T ss_pred --------CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCE
Confidence 2356667788 8888888888888888888654 0 122345566654 9999999999999
Q ss_pred EEEEeCCCeEEEEEccCCceEEeeecCC-CCceEEEEECCCCcEEEEEeCCCe-EEEEEc
Q 007283 506 FASGDVNREAIVWDRVSREVKLKNMLYH-TARINCLAWSPNNSMVATGSLDTC-VIIYEI 563 (609)
Q Consensus 506 l~s~s~d~~v~iwd~~~~~~~~~~~~~h-~~~i~~l~~s~d~~~l~s~s~D~~-v~vw~~ 563 (609)
|++++.|+.|++||+.+.+. +..+..| ...|++++ |++++|++++.||+ .+.|..
T Consensus 266 l~~~~~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 266 LYTAGSDGIISCWNLQTRKK-IKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEETTSCEEEEETTTTEE-EEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred EEEecCCceEEEEcCccHhH-hhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 99999999999999987665 4456677 99999999 99999999999998 666654
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-31 Score=263.59 Aligned_cols=293 Identities=19% Similarity=0.207 Sum_probs=221.0
Q ss_pred CeeEEEecCCccEEEEEEeeCC--CeEEEEecCCCeEEEEeCCC-Ccee-eeccCcccceEEEEEcCCCCEEEEEeCCCc
Q 007283 136 TNVGEFDGHSRRVLSCAFKPSR--PFRIATCGEDFLVNFYEGPP-FKFK-LSHRGHSNFVNCVRFSPDGSKFISVSSDKK 211 (609)
Q Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~--~~~i~t~~~d~~i~~~~~~~-~~~~-~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~ 211 (609)
..+..+.+|...|.+++|+|++ ...+++|+.|+.+++|+... .... ..+.+|...|++++|+|++++|++++.|+.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 3455678999999999999995 44699999999999999876 4433 677889999999999999999999999999
Q ss_pred EEEEeCCCCccccccCcCCCCccceEEEEE--CCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 212 GIIYDGKTADKIGELSPEDGHKGSVYAVSW--SPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~--spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+++||..+++.+... +|...|.+++| +|++.+|++++.|+.|++||+... +....+
T Consensus 110 v~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~--------------- 167 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIA----QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS---NPMMVL--------------- 167 (368)
T ss_dssp EEEEETTTTEEEEEE----ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS---SCSEEE---------------
T ss_pred EEEEEcCCCCceeec----cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC---cEEEEE---------------
Confidence 999999988766533 68999999999 999999999999999999998632 222111
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQ 369 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~ 369 (609)
..| ..+.++.+.. ..++.++.|+.+++|+..........
T Consensus 168 -------------------------------~~~-~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~------ 206 (368)
T 3mmy_A 168 -------------------------------QLP-ERCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRR------ 206 (368)
T ss_dssp -------------------------------ECS-SCEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEE------
T ss_pred -------------------------------ecC-CCceEEEecC---CeeEEEeCCCcEEEEEeccccchhhh------
Confidence 111 1233444332 46778888889999976432100000
Q ss_pred eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCc
Q 007283 370 IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFP 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (609)
... .....
T Consensus 207 ------------------------~~~------------------------------------------------~~~~~ 214 (368)
T 3mmy_A 207 ------------------------IES------------------------------------------------PLKHQ 214 (368)
T ss_dssp ------------------------CCC------------------------------------------------SCSSC
T ss_pred ------------------------ccc------------------------------------------------cccCC
Confidence 000 00011
Q ss_pred eeEEEEcCCCCE----EEEEeCCCcEEEEEecCCee-eeeEEEecCCC------------ceEEEEECCCCCEEEEEeCC
Q 007283 450 VTASAIAPDGSE----AIIGSQDGKLRVYSIRGDTL-TEEAVLEKHRG------------AVSVIRYSPDVSMFASGDVN 512 (609)
Q Consensus 450 ~~~~~~sp~g~~----l~~gs~dg~i~iw~~~~~~~-~~~~~~~~h~~------------~i~~v~~s~~~~~l~s~s~d 512 (609)
..++++.++... +++|+.||.|++|++..... .....+.+|.. .|.+++|+|++.+|++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d 294 (368)
T 3mmy_A 215 HRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD 294 (368)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT
T ss_pred CceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC
Confidence 233333333332 99999999999999976532 22345667765 79999999999999999999
Q ss_pred CeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 513 REAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 513 ~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
+.|++||+.+.+. +..+..|...|++++|+||+++|++++.|+..+.|++-
T Consensus 295 g~i~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 295 GRFSFWDKDARTK-LKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp SCEEEEETTTTEE-EEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred CeEEEEECCCCcE-EEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 9999999887654 45577899999999999999999999999876666553
No 98
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-30 Score=266.15 Aligned_cols=278 Identities=23% Similarity=0.408 Sum_probs=219.8
Q ss_pred ccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 184 HRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
..+|...|.++.| ++++|++|+.|+.|++||..+++.+..+ .+|.+.|.+++| ++++|++++.||+|++||+.
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL---TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEE---CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEE---cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 3457778988877 7889999999999999999998877666 379999999999 78899999999999999986
Q ss_pred cCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEE
Q 007283 264 EDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSS 343 (609)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~ 343 (609)
. ++.. ..+.+|...|.++.+. +..++++
T Consensus 202 ~---~~~~----------------------------------------------~~~~~h~~~v~~l~~~---~~~l~s~ 229 (435)
T 1p22_A 202 T---GEML----------------------------------------------NTLIHHCEAVLHLRFN---NGMMVTC 229 (435)
T ss_dssp S---CCEE----------------------------------------------EEECCCCSCEEEEECC---TTEEEEE
T ss_pred C---CcEE----------------------------------------------EEEcCCCCcEEEEEEc---CCEEEEe
Confidence 3 2211 1234577888888874 3699999
Q ss_pred ecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcE
Q 007283 344 SYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPEL 423 (609)
Q Consensus 344 s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (609)
+.||+|++|+..........
T Consensus 230 s~dg~i~vwd~~~~~~~~~~------------------------------------------------------------ 249 (435)
T 1p22_A 230 SKDRSIAVWDMASPTDITLR------------------------------------------------------------ 249 (435)
T ss_dssp ETTSCEEEEECSSSSCCEEE------------------------------------------------------------
T ss_pred eCCCcEEEEeCCCCCCceee------------------------------------------------------------
Confidence 99999999976532110000
Q ss_pred EEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCC
Q 007283 424 VLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDV 503 (609)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~ 503 (609)
.....+..++.++++ +++++++|+.||.|++||+.++.. ...+.+|...|.+++| ++
T Consensus 250 -----------------~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~--~~ 306 (435)
T 1p22_A 250 -----------------RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQY--RD 306 (435)
T ss_dssp -----------------EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEE--ET
T ss_pred -----------------eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEe--CC
Confidence 000011234666666 789999999999999999987754 4567899999999999 57
Q ss_pred CEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCC-------cceeEecc
Q 007283 504 SMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPAS-------SRMTIKGA 576 (609)
Q Consensus 504 ~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~-------~~~~~~~~ 576 (609)
.++++|+.|++|++||+.+++. +..+.+|...|++++| ++++|++|+.||+|++||+..... .......+
T Consensus 307 ~~l~~g~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 383 (435)
T 1p22_A 307 RLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 383 (435)
T ss_dssp TEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC
T ss_pred CEEEEEeCCCeEEEEECCCCCE-EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC
Confidence 8999999999999999987654 4457789999999999 789999999999999999853210 13455678
Q ss_pred ccCCeEEEEEcCCCeEEEEeCCCcEEEEEcc
Q 007283 577 HLGGVYGLAFTDEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 577 h~~~v~~~~~s~~~~l~s~s~D~~i~~W~~~ 607 (609)
|.+.|++++| ++..|+++|.||+|++|++.
T Consensus 384 h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 384 HSGRVFRLQF-DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp CSSCCCCEEE-CSSCEEECCSSSEEEEEC--
T ss_pred CCCCeEEEEe-CCCEEEEEeCCCEEEEEECC
Confidence 9999999999 77889999999999999985
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.4e-31 Score=270.08 Aligned_cols=199 Identities=17% Similarity=0.303 Sum_probs=160.8
Q ss_pred CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCce----------eeEEEeecc------------cceeEEEECCCC-
Q 007283 56 HAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHV----------LKKEFRVLS------------GRIDDLQWSPDG- 112 (609)
Q Consensus 56 h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~----------~~~~~~~~~------------~~v~~~~~spdg- 112 (609)
|.+.|++++|+|+|++||+|+.||+|+||++.+++. +...+..|. +.|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 578899999999999999999999999999986541 345677887 889999999998
Q ss_pred -CEEEEEECCCCcceEEEEEcCCCCee---------------------------------------EE-EecCCccEEEE
Q 007283 113 -LRIVACGDGKGKSLVRAFMWDSGTNV---------------------------------------GE-FDGHSRRVLSC 151 (609)
Q Consensus 113 -~~l~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~-~~~h~~~v~~~ 151 (609)
.+|++++.+. .+++|+...+... .. ..+|...|.++
T Consensus 107 ~~~l~s~s~d~---~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 107 AAQFLLSTNDK---TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp SSEEEEEECSS---CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred cceEEEeCCCC---eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 7888877544 4667766542211 12 36899999999
Q ss_pred EEeeCCCeEEEEecCCCeEEEEeCCC-Cceee-------eccCcccceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcc
Q 007283 152 AFKPSRPFRIATCGEDFLVNFYEGPP-FKFKL-------SHRGHSNFVNCVRFSPDG-SKFISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 152 ~~~p~~~~~i~t~~~d~~i~~~~~~~-~~~~~-------~~~~h~~~v~~l~~s~dg-~~l~s~~~d~~i~iwd~~~~~~ 222 (609)
+|+|++.. +++| .|+.+++||... .+... .+.+|...|++++|+|++ ++|++|+.|+.|++||.++++.
T Consensus 184 ~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 184 SINSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EECTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEcCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999874 7787 799999999874 33332 366899999999999998 8999999999999999998875
Q ss_pred ----ccccCcCCCCcc------------ceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 223 ----IGELSPEDGHKG------------SVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 223 ----~~~~~~~~~h~~------------~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+..+ .+|.. .|.+++|+|++++|++++. +.|++||+.
T Consensus 262 ~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 262 CDRHSKLF---EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp SCTTCEEE---CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred ccceeeEe---ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 3333 34554 8999999999999999998 999999986
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-31 Score=263.69 Aligned_cols=266 Identities=22% Similarity=0.309 Sum_probs=210.7
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCC--CCceeeeccCcccceEEEEEcCC--CCEEEEEeCCCcEE
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGP--PFKFKLSHRGHSNFVNCVRFSPD--GSKFISVSSDKKGI 213 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~--~~~~~~~~~~h~~~v~~l~~s~d--g~~l~s~~~d~~i~ 213 (609)
+..+.+|...|.+++|+|++.. +++|+.|+.+++|+.. ..+....+.+|...|++++|+|+ +++|++++.|+.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKR-LATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEecCCcccEEEEEEcCCCCE-EEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 4567899999999999999985 9999999999999976 55667778899999999999987 89999999999999
Q ss_pred EEeCCCCc--cccccCcCCCCccceEEEEECCC--CCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 214 IYDGKTAD--KIGELSPEDGHKGSVYAVSWSPD--GKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 214 iwd~~~~~--~~~~~~~~~~h~~~V~~l~~spd--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+||..+++ .+..+ .+|...|.+++|+|+ +.+|++++.|+.|++||+......
T Consensus 83 iwd~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--------------------- 138 (379)
T 3jrp_A 83 IWKEENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--------------------- 138 (379)
T ss_dssp EEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC---------------------
T ss_pred EEEcCCCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce---------------------
Confidence 99998876 33333 468899999999999 999999999999999998632100
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQ 369 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~ 369 (609)
....+.+|...|.++++++.....
T Consensus 139 --------------------------~~~~~~~~~~~v~~~~~~~~~~~~------------------------------ 162 (379)
T 3jrp_A 139 --------------------------SPIIIDAHAIGVNSASWAPATIEE------------------------------ 162 (379)
T ss_dssp --------------------------CEEEEECCTTCEEEEEECCCC---------------------------------
T ss_pred --------------------------eeEEecCCCCceEEEEEcCccccc------------------------------
Confidence 011234566667666664320000
Q ss_pred eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCc
Q 007283 370 IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFP 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (609)
T Consensus 163 -------------------------------------------------------------------------------- 162 (379)
T 3jrp_A 163 -------------------------------------------------------------------------------- 162 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCee--eeeEEEecCCCceEEEEECCC---CCEEEEEeCCCeEEEEEccCCc
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTL--TEEAVLEKHRGAVSVIRYSPD---VSMFASGDVNREAIVWDRVSRE 524 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~--~~~~~~~~h~~~i~~v~~s~~---~~~l~s~s~d~~v~iwd~~~~~ 524 (609)
.......|++.++++|+.||.|++||++.+.. .....+.+|.+.|.+++|+|+ +.++++++.|+.+++||+....
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 00001257889999999999999999976542 234567889999999999999 8999999999999999987753
Q ss_pred ----eEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcC
Q 007283 525 ----VKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 525 ----~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~ 564 (609)
........|...|++++|+|++++|++++.||.|++|++.
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 2222233488899999999999999999999999999986
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-31 Score=271.00 Aligned_cols=322 Identities=12% Similarity=0.078 Sum_probs=229.4
Q ss_pred ccCcCceeEEeecC-CCCeEEEeC-CCEEEEEeCCC---Cccc--cccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEc
Q 007283 13 STERGRGILISGHP-KSNSILYTN-GRSVIILDLSN---PLQV--SIYGEHAYPATVARFSPNGEWIASADVSGTVRIWG 85 (609)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~i~~~~~---~~~~--~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd 85 (609)
..|.+....+.++| +++.|+++. ++.|.|||+.+ +... ....+|.+.|++++|+|++++|++++.||+|+|||
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd 139 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK 139 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 34677888999999 999998874 58999999866 3211 11226999999999999999999999999999999
Q ss_pred CC---CCceeeEEEee------------cccceeEEE--ECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEec--CCc
Q 007283 86 AH---NDHVLKKEFRV------------LSGRIDDLQ--WSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG--HSR 146 (609)
Q Consensus 86 ~~---~~~~~~~~~~~------------~~~~v~~~~--~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~ 146 (609)
+. +++... .+.. +...+.++. ++||+.+|++++.+. .+++|+...+..+..+.+ |..
T Consensus 140 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 140 VNHYQQESEVK-FLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS---RVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEETTEEE-EEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS---EEEEEETTTCCEEEEEECCGGGC
T ss_pred eccccCCceee-ccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCeeeEEEccCCCCC
Confidence 95 333221 1111 233455555 668898888887543 578888888888888988 899
Q ss_pred cEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc-CcccceEEEEEc----CCCCEEEEEeCCCcEEEEeCCCCc
Q 007283 147 RVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR-GHSNFVNCVRFS----PDGSKFISVSSDKKGIIYDGKTAD 221 (609)
Q Consensus 147 ~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~l~~s----~dg~~l~s~~~d~~i~iwd~~~~~ 221 (609)
.|.+++|+|++. .+++|+.|+.+++||....+....+. +|...|++++|+ |++.+|++++.|+.|++||..+++
T Consensus 216 ~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 216 AVSSICIDEECC-VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp CEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred ceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 999999999987 49999999999999999888877765 788899999665 567799999999999999998877
Q ss_pred cccccCc---------------------CCC--CccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCC
Q 007283 222 KIGELSP---------------------EDG--HKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSG 278 (609)
Q Consensus 222 ~~~~~~~---------------------~~~--h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~ 278 (609)
.+..+.. ..+ |...|.+++|+ ++++|++++.|+.|++||+.. ++....+....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~---~~~~~~~~~~~ 370 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE---LSSSKAVISPS 370 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC---GGGCEEEECC-
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC---cccceEEeccc
Confidence 5543321 112 78889999999 789999999999999999974 33333333211
Q ss_pred CCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecC-CCCEEEEEecCCcEEEE
Q 007283 279 SGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNI-DPKVILSSSYDGLIVKW 352 (609)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~t~s~dg~i~~W 352 (609)
.. ..............+.... ++.. ..........|...|.++++... +..++++|+.||.|++|
T Consensus 371 ~~--~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 371 RF--SDVFIPTQVTANLTMLLRK------MKRT-STHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp -C--CCEEEEEEEETTEEEEEEE------CC--------------CCCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred cc--CceEEEEEeecceEEEEEe------cccc-cccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 11 1111111222222111111 1000 11112334569999999999865 35699999999999999
No 102
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-30 Score=261.93 Aligned_cols=295 Identities=18% Similarity=0.256 Sum_probs=220.8
Q ss_pred eCCCCceeeeccCcccceEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-Cccc-cccCcCCCCccceEEEEECCCCCeE
Q 007283 174 EGPPFKFKLSHRGHSNFVNCVRFSPD---GSKFISVSSDKKGIIYDGKT-ADKI-GELSPEDGHKGSVYAVSWSPDGKQV 248 (609)
Q Consensus 174 ~~~~~~~~~~~~~h~~~v~~l~~s~d---g~~l~s~~~d~~i~iwd~~~-~~~~-~~~~~~~~h~~~V~~l~~spd~~~l 248 (609)
+..+.+....+.+|...|++++|+|+ |++|++|+.|+.+++||..+ +..+ ..+ .+|.+.|++++|+|++++|
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ---QMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE---EECSSCEEEEEECTTSSEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe---ccccCCEEEEEECcCCCEE
Confidence 44566667778899999999999999 58999999999999999887 4443 233 4799999999999999999
Q ss_pred EEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeE
Q 007283 249 LTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVT 328 (609)
Q Consensus 249 ~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~ 328 (609)
++++.|+.|++||+.. ++.. .+.+|...|.
T Consensus 102 ~s~~~dg~v~iwd~~~---~~~~-----------------------------------------------~~~~~~~~v~ 131 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSS---NQAI-----------------------------------------------QIAQHDAPVK 131 (368)
T ss_dssp EEEETTSEEEEEETTT---TEEE-----------------------------------------------EEEECSSCEE
T ss_pred EEEcCCCcEEEEEcCC---CCce-----------------------------------------------eeccccCceE
Confidence 9999999999999862 1111 1234778888
Q ss_pred EEEEe-cCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCcccccccccc
Q 007283 329 ALTVL-NIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDI 407 (609)
Q Consensus 329 ~~~~~-~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 407 (609)
+++++ ..++.++++++.||.|++|+...+.....
T Consensus 132 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~--------------------------------------------- 166 (368)
T 3mmy_A 132 TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMV--------------------------------------------- 166 (368)
T ss_dssp EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEE---------------------------------------------
T ss_pred EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEE---------------------------------------------
Confidence 99884 34557899999999999997643210000
Q ss_pred CCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEE
Q 007283 408 GSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVL 487 (609)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~ 487 (609)
+.....+.++.+. +..+++++.|+.+++|++...........
T Consensus 167 ------------------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 208 (368)
T 3mmy_A 167 ------------------------------------LQLPERCYCADVI--YPMAVVATAERGLIVYQLENQPSEFRRIE 208 (368)
T ss_dssp ------------------------------------EECSSCEEEEEEE--TTEEEEEEGGGCEEEEECSSSCEEEEECC
T ss_pred ------------------------------------EecCCCceEEEec--CCeeEEEeCCCcEEEEEeccccchhhhcc
Confidence 0000112222333 45788899999999999976654333333
Q ss_pred ecCCCceEEEEECCCCCE----EEEEeCCCeEEEEEccCCce--EEeeecCCCC------------ceEEEEECCCCcEE
Q 007283 488 EKHRGAVSVIRYSPDVSM----FASGDVNREAIVWDRVSREV--KLKNMLYHTA------------RINCLAWSPNNSMV 549 (609)
Q Consensus 488 ~~h~~~i~~v~~s~~~~~----l~s~s~d~~v~iwd~~~~~~--~~~~~~~h~~------------~i~~l~~s~d~~~l 549 (609)
..+...+.++.+.++... +++++.|+.+++||+..... ....+..|.. .|++++|+|++++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 288 (368)
T 3mmy_A 209 SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTL 288 (368)
T ss_dssp CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCE
T ss_pred ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEE
Confidence 345566777777666655 99999999999999876521 1223445554 79999999999999
Q ss_pred EEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEc
Q 007283 550 ATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRL 606 (609)
Q Consensus 550 ~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~ 606 (609)
++|+.||.|++||+... ..+....+|...|++++|+ ++++|+++|.|+..+.|++
T Consensus 289 ~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 289 ATVGSDGRFSFWDKDAR--TKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEETTSCEEEEETTTT--EEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred EEEccCCeEEEEECCCC--cEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 99999999999999763 3445567899999999999 7889999999886655543
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-30 Score=269.25 Aligned_cols=309 Identities=16% Similarity=0.197 Sum_probs=222.3
Q ss_pred cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc-----------eeeeccCcc------------cceEEEEEcCC
Q 007283 143 GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK-----------FKLSHRGHS------------NFVNCVRFSPD 199 (609)
Q Consensus 143 ~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~-----------~~~~~~~h~------------~~v~~l~~s~d 199 (609)
.|.+.|.+++|+|++.. ||+|+.|+.|++|+....+ ....+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g~~-la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGEL-LATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSE-EEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCE-EEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 45789999999999885 9999999999999977655 466788998 88999999999
Q ss_pred C--CEEEEEeCCCcEEEEeCCCCccccc-------------------c------------------CcCCCCccceEEEE
Q 007283 200 G--SKFISVSSDKKGIIYDGKTADKIGE-------------------L------------------SPEDGHKGSVYAVS 240 (609)
Q Consensus 200 g--~~l~s~~~d~~i~iwd~~~~~~~~~-------------------~------------------~~~~~h~~~V~~l~ 240 (609)
+ ..|++++.|+.|++||..+++.... + ....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 7999999999999999866432100 0 00247999999999
Q ss_pred ECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceee
Q 007283 241 WSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQL 320 (609)
Q Consensus 241 ~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~ 320 (609)
|+|++++|+++ .|++|++||+... .+... ++... +..+
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~--~~~~~----------------------------------~~~~~-----~~~~ 222 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEIT--DRSFN----------------------------------IVDIK-----PANM 222 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEE--EEEEE----------------------------------EEECC-----CSSG
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCC--Cceee----------------------------------eeecc-----cccc
Confidence 99999999998 7999999998621 11111 11111 1235
Q ss_pred eCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccc
Q 007283 321 SGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCG 400 (609)
Q Consensus 321 ~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~ 400 (609)
.+|...|.+++|++..+.++++++.||+|++|+...+..... .+..+.....
T Consensus 223 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~------~~~~~~~~~~---------------------- 274 (447)
T 3dw8_B 223 EELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR------HSKLFEEPED---------------------- 274 (447)
T ss_dssp GGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT------TCEEECCC------------------------
T ss_pred cccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc------eeeEeccCCC----------------------
Confidence 679999999999865558999999999999998754321000 0000000000
Q ss_pred cccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecC-C
Q 007283 401 YANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRG-D 479 (609)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~-~ 479 (609)
.. .......+..++.+++++|+|+++++++. +.|++||++. +
T Consensus 275 ----------~~--------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~ 317 (447)
T 3dw8_B 275 ----------PS--------------------------NRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMEN 317 (447)
T ss_dssp ---------------------------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCS
T ss_pred ----------cc--------------------------ccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCc
Confidence 00 00000012246899999999999999999 9999999975 4
Q ss_pred eeeeeEEEecCCCc---------------eEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEee---------------
Q 007283 480 TLTEEAVLEKHRGA---------------VSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKN--------------- 529 (609)
Q Consensus 480 ~~~~~~~~~~h~~~---------------i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~--------------- 529 (609)
.. ...+.+|... +..++|+|++.+|++|+.|+.|++||+.+++.....
T Consensus 318 ~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (447)
T 3dw8_B 318 RP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPR 395 (447)
T ss_dssp SC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCC
T ss_pred cc--cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCc
Confidence 33 3456667542 234899999999999999999999998876542210
Q ss_pred ----------------ecCCCCceEEEEECCCCcEEEEEeCCCeEEEEE
Q 007283 530 ----------------MLYHTARINCLAWSPNNSMVATGSLDTCVIIYE 562 (609)
Q Consensus 530 ----------------~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~ 562 (609)
...+...|++++|+|++.+||+++.++ +.+|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 396 KVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 012345799999999999999999887 66665
No 104
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-30 Score=261.54 Aligned_cols=255 Identities=22% Similarity=0.400 Sum_probs=202.5
Q ss_pred eeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCccccccCcCCCCccceEEEEECCC--CCeEEEEeCCC
Q 007283 180 FKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK--TADKIGELSPEDGHKGSVYAVSWSPD--GKQVLTASADK 255 (609)
Q Consensus 180 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~h~~~V~~l~~spd--~~~l~s~s~d~ 255 (609)
....+.+|...|++++|+|++++|++|+.|+.|++||.. +++.+..+ .+|.+.|++++|+|+ +++|++++.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL---TGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe---cCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 345678899999999999999999999999999999987 44444444 479999999999987 99999999999
Q ss_pred cEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecC
Q 007283 256 SAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNI 335 (609)
Q Consensus 256 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 335 (609)
.|++||+.. ++... ...+.+|.
T Consensus 80 ~v~iwd~~~---~~~~~--------------------------------------------~~~~~~~~----------- 101 (379)
T 3jrp_A 80 KVLIWKEEN---GRWSQ--------------------------------------------IAVHAVHS----------- 101 (379)
T ss_dssp CEEEEEEET---TEEEE--------------------------------------------EEEECCCS-----------
T ss_pred EEEEEEcCC---CceeE--------------------------------------------eeeecCCC-----------
Confidence 999999752 10000 00001111
Q ss_pred CCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeE
Q 007283 336 DPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLS 415 (609)
Q Consensus 336 ~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (609)
T Consensus 102 -------------------------------------------------------------------------------- 101 (379)
T 3jrp_A 102 -------------------------------------------------------------------------------- 101 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC--CCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCc
Q 007283 416 VALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD--GSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGA 493 (609)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~ 493 (609)
.++.+++++|+ +.++++|+.|+.|++|++..........+.+|...
T Consensus 102 --------------------------------~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 102 --------------------------------ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 149 (379)
T ss_dssp --------------------------------SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC
T ss_pred --------------------------------cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc
Confidence 23566777888 88899999999999999877644444567889999
Q ss_pred eEEEEECC-------------CCCEEEEEeCCCeEEEEEccCCce---EEeeecCCCCceEEEEECCC---CcEEEEEeC
Q 007283 494 VSVIRYSP-------------DVSMFASGDVNREAIVWDRVSREV---KLKNMLYHTARINCLAWSPN---NSMVATGSL 554 (609)
Q Consensus 494 i~~v~~s~-------------~~~~l~s~s~d~~v~iwd~~~~~~---~~~~~~~h~~~i~~l~~s~d---~~~l~s~s~ 554 (609)
|.+++|+| ++.++++++.|+.|++||+..... ....+..|...|++++|+|+ +++|++++.
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 99999999 799999999999999999876542 23346689999999999999 899999999
Q ss_pred CCeEEEEEcCCCCCc-ceeE--eccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 555 DTCVIIYEIDKPASS-RMTI--KGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 555 D~~v~vw~~~~~~~~-~~~~--~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
|+.|++||+...... .... ...|...|++++|+ ++++|++++.|+.|++|++.
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 999999999764211 1122 23488999999999 78899999999999999986
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=8.7e-30 Score=261.73 Aligned_cols=278 Identities=23% Similarity=0.350 Sum_probs=220.7
Q ss_pred ecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 007283 142 DGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTAD 221 (609)
Q Consensus 142 ~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~ 221 (609)
.+|...|.++++ ++. .+++|+.|+.|++||..+++....+.+|...|.+++| +++.|++|+.|+.|++||..+++
T Consensus 130 ~~~~~~v~~~~~--d~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQ-KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CSSCCCEEEEEC--CSS-EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred cCCCCcEEEEEE--CCC-EEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 356677888876 555 5999999999999999999999999999999999999 78899999999999999999998
Q ss_pred cccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEc
Q 007283 222 KIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSL 301 (609)
Q Consensus 222 ~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (609)
.+..+. +|.+.|.+++|++ .++++++.|+.|++||+.......
T Consensus 205 ~~~~~~---~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~-------------------------------- 247 (435)
T 1p22_A 205 MLNTLI---HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDIT-------------------------------- 247 (435)
T ss_dssp EEEEEC---CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCE--------------------------------
T ss_pred EEEEEc---CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCce--------------------------------
Confidence 877663 7999999999974 589999999999999986321100
Q ss_pred CCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEE
Q 007283 302 GGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIV 381 (609)
Q Consensus 302 ~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (609)
....+.+|...|.++.+ ++..+++++.||.|++|+...+.. +.
T Consensus 248 --------------~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~----------~~---------- 290 (435)
T 1p22_A 248 --------------LRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEF----------VR---------- 290 (435)
T ss_dssp --------------EEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTCCE----------EE----------
T ss_pred --------------eeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcCcE----------EE----------
Confidence 00234568888888887 347999999999999998643210 00
Q ss_pred EEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCE
Q 007283 382 TSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSE 461 (609)
Q Consensus 382 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 461 (609)
.+ ..+...+.++++ ++.+
T Consensus 291 ---------~~---------------------------------------------------~~~~~~v~~~~~--~~~~ 308 (435)
T 1p22_A 291 ---------TL---------------------------------------------------NGHKRGIACLQY--RDRL 308 (435)
T ss_dssp ---------EE---------------------------------------------------ECCSSCEEEEEE--ETTE
T ss_pred ---------EE---------------------------------------------------cCCCCcEEEEEe--CCCE
Confidence 00 001123555555 5789
Q ss_pred EEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCce--------EEeeecCC
Q 007283 462 AIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREV--------KLKNMLYH 533 (609)
Q Consensus 462 l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~--------~~~~~~~h 533 (609)
+++|+.||.|++||+.++.. ...+.+|...|.+++| ++.++++|+.|++|++||+.+... .+..+..|
T Consensus 309 l~~g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h 384 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 384 (435)
T ss_dssp EEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred EEEEeCCCeEEEEECCCCCE--EEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC
Confidence 99999999999999987654 4567899999999999 889999999999999999765431 34557789
Q ss_pred CCceEEEEECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 534 TARINCLAWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 534 ~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
...|++++| ++++|++|+.||+|++||+...
T Consensus 385 ~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 385 SGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp SSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred CCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 999999999 7889999999999999999753
No 106
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=3.6e-30 Score=255.87 Aligned_cols=295 Identities=16% Similarity=0.199 Sum_probs=210.1
Q ss_pred ccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCc---eeeEEEeecccceeEEEECC--CCCEEEEEECCCCc
Q 007283 50 VSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDH---VLKKEFRVLSGRIDDLQWSP--DGLRIVACGDGKGK 124 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~---~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~ 124 (609)
...+.+|++.|++++|+|+|++||+++.||+|+|||+.++. .+...+..|...|.+++|+| |+++|++++.+.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-- 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-- 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--
Confidence 35678999999999999999999999999999999998653 24456778999999999999 699999888644
Q ss_pred ceEEEEEcCCC---------CeeEEEecCCccEEEEEEeeC--CCeEEEEecCCCeEEEEeCCCCceeeec---------
Q 007283 125 SLVRAFMWDSG---------TNVGEFDGHSRRVLSCAFKPS--RPFRIATCGEDFLVNFYEGPPFKFKLSH--------- 184 (609)
Q Consensus 125 ~~~~~~~~~~~---------~~~~~~~~h~~~v~~~~~~p~--~~~~i~t~~~d~~i~~~~~~~~~~~~~~--------- 184 (609)
.+++|+.+.+ ..+..+.+|...|.+++|+|+ +. .+++++.|+.+++||....+....+
T Consensus 82 -~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 82 -TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp -CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred -eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 4778887765 446778899999999999998 76 5999999999999997765543222
Q ss_pred ----cCcccceEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCC----CeEEEEeC
Q 007283 185 ----RGHSNFVNCVRFSPD---GSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDG----KQVLTASA 253 (609)
Q Consensus 185 ----~~h~~~v~~l~~s~d---g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~----~~l~s~s~ 253 (609)
.+|...+.+++|+|+ +..|++++.|+.+.+|+...++... .....+|.+.|++++|+|++ ++|++++.
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHV-AAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEE-EEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceee-eeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 268889999999997 8899999999999888877665421 12234799999999999998 89999999
Q ss_pred CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEE----cCCcEEEEeCCCCCCCceeeeCCCCCeEE
Q 007283 254 DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVS----LGGTISIFSANDLEKSPLQLSGHMKNVTA 329 (609)
Q Consensus 254 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~i~~~~~~~~~~~~~~~~~h~~~v~~ 329 (609)
|+.|++||+............ .. .. ..............+. ....+.+|.... ......+.+|...|.+
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~--~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~ 311 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEES--LT--NS--NMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ-VELLSEHDDHNGEVWS 311 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------------CCSEE-EEEEEEECTTSSCEEE
T ss_pred CCeEEEEeCCCCcCccccCCc--cc--ce--eccCCCcccccccccccccccceeeeeccccc-ccEEEEEecccccEEE
Confidence 999999998742111100000 00 00 0000000000111111 111122221110 1123456789999999
Q ss_pred EEEecCCCCEEEEEecCCcEEEEecCcc
Q 007283 330 LTVLNIDPKVILSSSYDGLIVKWIQGIG 357 (609)
Q Consensus 330 ~~~~~~~~~~~~t~s~dg~i~~W~~~~~ 357 (609)
++|++ ++.++++++.||.|++|+...+
T Consensus 312 ~~~s~-~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 312 VSWNL-TGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEECS-SSCCEEEEETTSCEEEEEECTT
T ss_pred EEEcC-CCCEEEEecCCCcEEEEecCcC
Confidence 99975 4579999999999999987653
No 107
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.98 E-value=6.4e-28 Score=274.41 Aligned_cols=434 Identities=11% Similarity=0.055 Sum_probs=290.1
Q ss_pred CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECC---CCcceEEEEEc
Q 007283 56 HAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDG---KGKSLVRAFMW 132 (609)
Q Consensus 56 h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~---~~~~~~~~~~~ 132 (609)
+.+.+..++||| +.||.++. ++|.+|++.+++. ..+..|...+..++|||||++|+.++.. .+. ..++.|
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~--~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~--~~i~~~ 85 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGST--RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNT--ADLYFY 85 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCE--EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCE--EEEEEE
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcE--EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCC--CeEEEE
Confidence 456789999996 58887765 6899999987653 4577888899999999999999987643 222 345555
Q ss_pred CC-CCeeEEEecCCccE-------EEEEEeeCCCeEEEEecCC------CeEEEEeCCCCceeeeccCcccceEEEEEcC
Q 007283 133 DS-GTNVGEFDGHSRRV-------LSCAFKPSRPFRIATCGED------FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSP 198 (609)
Q Consensus 133 ~~-~~~~~~~~~h~~~v-------~~~~~~p~~~~~i~t~~~d------~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 198 (609)
+. +.....+..|...+ ..++|+|++. ++++++.+ ..+..|+...++......++ ...++|+|
T Consensus 86 d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~~~~~~sp 161 (1045)
T 1k32_A 86 NGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGP---ATHILFAD 161 (1045)
T ss_dssp ETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCS---CSEEEEET
T ss_pred ECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCC---cceeeeCC
Confidence 43 23356778888888 8999999998 67777654 35666776555443333222 34577999
Q ss_pred CCCEEEEEeC------------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCC
Q 007283 199 DGSKFISVSS------------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDN 266 (609)
Q Consensus 199 dg~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~ 266 (609)
| ++++++. +....+|....+.....+ .+|.+.+.++.|+++ .++++++.|+++++|.+...
T Consensus 162 -G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l---~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~- 234 (1045)
T 1k32_A 162 -G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI---VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLD- 234 (1045)
T ss_dssp -T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE---ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETT-
T ss_pred -C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC---cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCC-
Confidence 8 8888753 234566643222333333 478999999999998 67778888899999987532
Q ss_pred CCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeC-----------CCCCeEEEEEe-c
Q 007283 267 HGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSG-----------HMKNVTALTVL-N 334 (609)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~-----------h~~~v~~~~~~-~ 334 (609)
+.....+.... .. ....+..++..++.+ .++.+++|+... .....+.+ |...+..++++ +
T Consensus 235 -g~~~~~l~~~~--~~--~~~~~SpDG~~la~~-~~~~i~~~d~~~--~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p 306 (1045)
T 1k32_A 235 -GKDLRKHTSFT--DY--YPRHLNTDGRRILFS-KGGSIYIFNPDT--EKIEKIEIGDLESPEDRIISIPSKFAEDFSPL 306 (1045)
T ss_dssp -SCSCEECCCCC--SS--CEEEEEESSSCEEEE-ETTEEEEECTTT--CCEEECCCCCCCBCCSEEEECGGGGEEEEEEC
T ss_pred -CCcceEecCCC--Cc--ceeeEcCCCCEEEEE-eCCEEEEecCCc--eEeeeeccCcccccccccccccccceeeecCC
Confidence 22222232211 11 122333445556655 588999998732 11223333 34468888887 5
Q ss_pred CCCCEEEEEecCCcEEEEecCccccceecccccc-ceeEeeee-CCcEEEEeccceEE-EEeccCCccccccccccCCCC
Q 007283 335 IDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENS-QIKCFAAI-EEEIVTSGFDNKIW-RVSLQGDQCGYANSIDIGSQP 411 (609)
Q Consensus 335 ~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~d~~i~-~~~~~~~~~~~~~~~~~~~~~ 411 (609)
+++.++.++ ++.+.+|+...+...... .+.. .+..+.+. +..++..+.+..+| .|+......
T Consensus 307 -dG~~la~~~-~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~------------ 371 (1045)
T 1k32_A 307 -DGDLIAFVS-RGQAFIQDVSGTYVLKVP-EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA------------ 371 (1045)
T ss_dssp -GGGCEEEEE-TTEEEEECTTSSBEEECS-CCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE------------
T ss_pred -CCCEEEEEE-cCEEEEEcCCCCceEEcc-CCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCc------------
Confidence 445666666 889999987654322211 1111 22222222 22344444455565 555432210
Q ss_pred ceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCC
Q 007283 412 KDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHR 491 (609)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~ 491 (609)
.....+...+..++++|||+++|+++.++.|++||+.++.. .....+|.
T Consensus 372 -----------------------------~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~--~~~~~~~~ 420 (1045)
T 1k32_A 372 -----------------------------EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP--TVIERSRE 420 (1045)
T ss_dssp -----------------------------EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE--EEEEECSS
T ss_pred -----------------------------eEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce--EEeccCCC
Confidence 00001224578899999999999999999999999987765 34456899
Q ss_pred CceEEEEECCCCCEEEEEeCCC----------eEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q 007283 492 GAVSVIRYSPDVSMFASGDVNR----------EAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIY 561 (609)
Q Consensus 492 ~~i~~v~~s~~~~~l~s~s~d~----------~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw 561 (609)
+.+.+++|||||+++++++.++ ++++||+.+++ ...+..|...+.+++|+|||++|+.++.++...+|
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 9999999999999999887654 89999988765 34566788889999999999999999988877777
Q ss_pred Ec
Q 007283 562 EI 563 (609)
Q Consensus 562 ~~ 563 (609)
+.
T Consensus 499 ~~ 500 (1045)
T 1k32_A 499 DR 500 (1045)
T ss_dssp CS
T ss_pred ch
Confidence 53
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.9e-29 Score=251.42 Aligned_cols=285 Identities=14% Similarity=0.121 Sum_probs=194.4
Q ss_pred CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeE-EEEeCCCc
Q 007283 178 FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQV-LTASADKS 256 (609)
Q Consensus 178 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l-~s~s~d~~ 256 (609)
.+......+|...|++++|+|||++|++|+.++ +++|+..+++..... +...+..+++.+++.++ ++++.|++
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ-----EMRHLSKVRMLHRTNYVAFVTGVKEV 82 (355)
T ss_dssp ----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE-----ECSCCCEEEECTTSSEEEEECSSTTE
T ss_pred cCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee-----ecCCeEEEEEcCCCCEEEEEECCccE
Confidence 333445578999999999999999999888775 789998876655432 12247788899988877 56778899
Q ss_pred EEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCC
Q 007283 257 AKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNID 336 (609)
Q Consensus 257 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 336 (609)
|++||+.. ++....+. |...|.++.+..
T Consensus 83 v~iWd~~~---~~~~~~~~-----------------------------------------------~~~~v~~v~~~~-- 110 (355)
T 3vu4_A 83 VHIWDDVK---KQDVSRIK-----------------------------------------------VDAPVKDLFLSR-- 110 (355)
T ss_dssp EEEEETTT---TEEEEEEE-----------------------------------------------CSSCEEEEEECS--
T ss_pred EEEEECCC---CcEEEEEE-----------------------------------------------CCCceEEEEEcC--
Confidence 99999863 22222211 334566666642
Q ss_pred CCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEe
Q 007283 337 PKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSV 416 (609)
Q Consensus 337 ~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (609)
..++.+ .|+.|++|+...... .+..+
T Consensus 111 -~~~~~~-~~~~i~i~d~~~~~~---------~~~~~------------------------------------------- 136 (355)
T 3vu4_A 111 -EFIVVS-YGDVISVFKFGNPWK---------RITDD------------------------------------------- 136 (355)
T ss_dssp -SEEEEE-ETTEEEEEESSTTCC---------BSSCC-------------------------------------------
T ss_pred -CEEEEE-EcCEEEEEECCCCce---------eeEEe-------------------------------------------
Confidence 333333 478899997643200 00000
Q ss_pred eccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEE--EeCCCcEEEEEecCCee-------------
Q 007283 417 ALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAII--GSQDGKLRVYSIRGDTL------------- 481 (609)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~--gs~dg~i~iw~~~~~~~------------- 481 (609)
.. +...++++| .+++. |+.||.|++||+..+..
T Consensus 137 ----------------------~~--------~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~ 184 (355)
T 3vu4_A 137 ----------------------IR--------FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAI 184 (355)
T ss_dssp ----------------------EE--------EEEEEEEET--TEEEEEESSCTTCEEEEECCC----------------
T ss_pred ----------------------cc--------CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCcccccccccccccc
Confidence 00 112234555 45555 68999999999976430
Q ss_pred ee-eEEEecCCCceEEEEECCCCCEEEEEeCCCe-EEEEEccCCceEEeeec-C-CCCceEEEEECCCCcEEEEEeCCCe
Q 007283 482 TE-EAVLEKHRGAVSVIRYSPDVSMFASGDVNRE-AIVWDRVSREVKLKNML-Y-HTARINCLAWSPNNSMVATGSLDTC 557 (609)
Q Consensus 482 ~~-~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~-~-h~~~i~~l~~s~d~~~l~s~s~D~~ 557 (609)
.. ...+.+|.+.|.+++|+|+|.+|++|+.|++ +++||+.+++... .+. + |...|++++|+||+++|++++.|++
T Consensus 185 ~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~-~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 185 LGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR-EFRRGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp --CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE-EEECTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred CcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEEcCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 01 3567899999999999999999999999998 9999998776543 344 4 9999999999999999999999999
Q ss_pred EEEEEcCCCCCcceeE---------------------eccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 558 VIIYEIDKPASSRMTI---------------------KGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 558 v~vw~~~~~~~~~~~~---------------------~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
|++||+.......... ...+......++|+ +++.|++++.||.+++|++.
T Consensus 264 v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 264 LHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 9999997532111111 11112234678999 77899999999999999975
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1.8e-29 Score=250.85 Aligned_cols=250 Identities=17% Similarity=0.293 Sum_probs=203.4
Q ss_pred ccCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCc----cccccccCCCCcEEEEECC--CCCEEEEEeCCCcEEEEc
Q 007283 13 STERGRGILISGHPKSNSILYTN-GRSVIILDLSNPL----QVSIYGEHAYPATVARFSP--NGEWIASADVSGTVRIWG 85 (609)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~----~~~~~~~h~~~v~~~~~sp--~g~~las~~~d~~i~vWd 85 (609)
..|.+....+.++|+++.|++.. ++.+.+|++.++. ....+.+|...|++++|+| |+++|++++.||+|+|||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 45677888999999999988875 5899999998763 4455679999999999999 699999999999999999
Q ss_pred CCCCc--------eeeEEEeecccceeEEEECCC--CCEEEEEECCCCcceEEEEEcCCCCeeEEEe-------------
Q 007283 86 AHNDH--------VLKKEFRVLSGRIDDLQWSPD--GLRIVACGDGKGKSLVRAFMWDSGTNVGEFD------------- 142 (609)
Q Consensus 86 ~~~~~--------~~~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 142 (609)
+.+++ .....+..|...|.+++|+|+ +.+|++++.+. .+++|+...+..+..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG---ILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC---EEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC---cEEEecCCChHHhccccccccccccccccC
Confidence 98753 234556788899999999999 99999887544 56777777655433222
Q ss_pred cCCccEEEEEEeeC--CCeEEEEecCCCeEEEEeCCCCce--eeeccCcccceEEEEEcCCC----CEEEEEeCCCcEEE
Q 007283 143 GHSRRVLSCAFKPS--RPFRIATCGEDFLVNFYEGPPFKF--KLSHRGHSNFVNCVRFSPDG----SKFISVSSDKKGII 214 (609)
Q Consensus 143 ~h~~~v~~~~~~p~--~~~~i~t~~~d~~i~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg----~~l~s~~~d~~i~i 214 (609)
+|...+.+++|+|+ ....+++++.|+.+.+|+....+. ...+.+|...|++++|+|++ ++|++++.|+.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 67889999999997 234699999999998888766654 66788999999999999998 79999999999999
Q ss_pred EeCCCCccc-------------------------------------------cccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 215 YDGKTADKI-------------------------------------------GELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 215 wd~~~~~~~-------------------------------------------~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
||...+... ..+....+|.+.|++++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 998764210 1111124789999999999999999999
Q ss_pred eCCCcEEEeecccC
Q 007283 252 SADKSAKVWDISED 265 (609)
Q Consensus 252 s~d~~i~iwd~~~~ 265 (609)
+.|+.|++|++...
T Consensus 325 ~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 325 GDDGKVRLWKATYS 338 (351)
T ss_dssp ETTSCEEEEEECTT
T ss_pred cCCCcEEEEecCcC
Confidence 99999999999743
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.2e-29 Score=257.80 Aligned_cols=283 Identities=15% Similarity=0.164 Sum_probs=215.5
Q ss_pred EEEEeeCCCeEEEEecCCCeEEEEeCCCC----ceeeeccCcccceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc---
Q 007283 150 SCAFKPSRPFRIATCGEDFLVNFYEGPPF----KFKLSHRGHSNFVNCVRFSP-DGSKFISVSSDKKGIIYDGKTAD--- 221 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~d~~i~iwd~~~~~--- 221 (609)
.++++|+...++++++.|+.+.+|+.... +....+.+|...|++++|+| ++++|++|+.|+.|++||..++.
T Consensus 39 ~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL 118 (402)
T ss_dssp SEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS
T ss_pred cEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc
Confidence 47788877666677899999999997543 23345778999999999999 89999999999999999998874
Q ss_pred ----cccccCcCCCCccceEEEEECCCC-CeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeE
Q 007283 222 ----KIGELSPEDGHKGSVYAVSWSPDG-KQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFL 296 (609)
Q Consensus 222 ----~~~~~~~~~~h~~~V~~l~~spd~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (609)
.+..+ .+|.+.|.+++|+|++ .+|++++.|++|++||+.. ++...
T Consensus 119 ~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---~~~~~------------------------ 168 (402)
T 2aq5_A 119 PLREPVITL---EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---GAAVL------------------------ 168 (402)
T ss_dssp CBCSCSEEE---ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT---TEEEE------------------------
T ss_pred ccCCceEEe---cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---CCccE------------------------
Confidence 23333 4799999999999998 6999999999999999863 22111
Q ss_pred EEEEcCCcEEEEeCCCCCCCceee--eCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEee
Q 007283 297 VIVSLGGTISIFSANDLEKSPLQL--SGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFA 374 (609)
Q Consensus 297 ~~~~~~g~i~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~ 374 (609)
.+ .+|...|.++++++ ++.++++++.|+.|++|+...+.. +
T Consensus 169 ----------------------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~----------~---- 211 (402)
T 2aq5_A 169 ----------------------TLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTV----------V---- 211 (402)
T ss_dssp ----------------------EECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEE----------E----
T ss_pred ----------------------EEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCce----------e----
Confidence 12 35788899999875 567899999999999998643210 0
Q ss_pred eeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEecc-CCceeEE
Q 007283 375 AIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINL-RFPVTAS 453 (609)
Q Consensus 375 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 453 (609)
..+. ..+ ...+..+
T Consensus 212 ---------------~~~~--------------------------------------------------~~~~~~~~~~~ 226 (402)
T 2aq5_A 212 ---------------AEKD--------------------------------------------------RPHEGTRPVHA 226 (402)
T ss_dssp ---------------EEEE--------------------------------------------------CSSCSSSCCEE
T ss_pred ---------------eeec--------------------------------------------------cCCCCCcceEE
Confidence 0000 000 1126778
Q ss_pred EEcCCCCEEEEE---eCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEE-EEeCCCeEEEEEccCCceEEee
Q 007283 454 AIAPDGSEAIIG---SQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFA-SGDVNREAIVWDRVSREVKLKN 529 (609)
Q Consensus 454 ~~sp~g~~l~~g---s~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~-s~s~d~~v~iwd~~~~~~~~~~ 529 (609)
+++|+++++++| +.|+.|++||+.............|...|.+++|+|++.+++ +|+.|+.|++||+.+.+..+..
T Consensus 227 ~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 227 VFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHY 306 (402)
T ss_dssp EECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEE
T ss_pred EEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEe
Confidence 899999999999 799999999997654311222335778899999999999986 5567999999999877631222
Q ss_pred ec--CCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 530 ML--YHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 530 ~~--~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
+. .|...|++++|+|++.++++ .|+.+++|++...
T Consensus 307 l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 307 LSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETT
T ss_pred ecccccCCcccceEEeccccccee--cceeEEEEEcCCC
Confidence 22 36689999999999998864 5779999998753
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=9.1e-29 Score=246.48 Aligned_cols=305 Identities=11% Similarity=0.087 Sum_probs=199.5
Q ss_pred EEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEEC
Q 007283 41 ILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGD 120 (609)
Q Consensus 41 i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 120 (609)
|+++.+...+..+.+|++.|++++|+|||++||+|+.|+ ++||+..+.+... ..+...
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~---~~~~~~------------------ 60 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIM---SQEMRH------------------ 60 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEE---EEECSC------------------
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceee---eeecCC------------------
Confidence 455655555556788999999999999999999998765 8999987643211 110011
Q ss_pred CCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCC
Q 007283 121 GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDG 200 (609)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 200 (609)
+..+++.+++...+++++.|+.+++||..+++....+. |...|.++.|+++.
T Consensus 61 ---------------------------~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~ 112 (355)
T 3vu4_A 61 ---------------------------LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF 112 (355)
T ss_dssp ---------------------------CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE
T ss_pred ---------------------------eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE
Confidence 23344455555555677788899999988887777665 56689999999874
Q ss_pred CEEEEEeCCCcEEEEeCCCC-ccccccCcCCCCccceEEEEECCCCCeEEE--EeCCCcEEEeecccCCCCceEEEeccC
Q 007283 201 SKFISVSSDKKGIIYDGKTA-DKIGELSPEDGHKGSVYAVSWSPDGKQVLT--ASADKSAKVWDISEDNHGKLKKTLTPS 277 (609)
Q Consensus 201 ~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~h~~~V~~l~~spd~~~l~s--~s~d~~i~iwd~~~~~~~~~~~~~~~~ 277 (609)
++++ .|+.+++||..++ +.+..+. . ....++++| .+++. ++.||.|++||+.... .....
T Consensus 113 --~~~~-~~~~i~i~d~~~~~~~~~~~~---~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~---~~~~~--- 175 (355)
T 3vu4_A 113 --IVVS-YGDVISVFKFGNPWKRITDDI---R---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSG---SATTQ--- 175 (355)
T ss_dssp --EEEE-ETTEEEEEESSTTCCBSSCCE---E---EEEEEEEET--TEEEEEESSCTTCEEEEECCC-------------
T ss_pred --EEEE-EcCEEEEEECCCCceeeEEec---c---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCC---ccccc---
Confidence 4443 4789999999887 6655542 1 344566777 55665 5789999999986310 00000
Q ss_pred CCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCcc
Q 007283 278 GSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIG 357 (609)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~ 357 (609)
.. . .....+
T Consensus 176 ------------------------------------~~----------~--------~~~~~~----------------- 184 (355)
T 3vu4_A 176 ------------------------------------DQ----------G--------VQQKAI----------------- 184 (355)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------cc----------c--------cccccc-----------------
Confidence 00 0 000000
Q ss_pred ccceeccccccc-eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEee
Q 007283 358 YGGKLQRKENSQ-IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLR 436 (609)
Q Consensus 358 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (609)
.+ +
T Consensus 185 ----------~p~~------------------------------------------------------------------ 188 (355)
T 3vu4_A 185 ----------LGKG------------------------------------------------------------------ 188 (355)
T ss_dssp ------------CC------------------------------------------------------------------
T ss_pred ----------Cccc------------------------------------------------------------------
Confidence 00 0
Q ss_pred CCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCc-EEEEEecCCeeeeeEEEe-c-CCCceEEEEECCCCCEEEEEeCCC
Q 007283 437 GAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGK-LRVYSIRGDTLTEEAVLE-K-HRGAVSVIRYSPDVSMFASGDVNR 513 (609)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~-i~iw~~~~~~~~~~~~~~-~-h~~~i~~v~~s~~~~~l~s~s~d~ 513 (609)
.....+..++.+++++|+|+++|+|+.|++ |++||++++... ..+. + |.+.|.+++|+|++++|++++.|+
T Consensus 189 ----~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~--~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 189 ----VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV--REFRRGLDRADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp ----EEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE--EEEECTTCCSCEEEEEECTTSCEEEEEETTC
T ss_pred ----EEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE--EEEEcCCCCCcEEEEEECCCCCEEEEEECCC
Confidence 000012345888999999999999999998 999999877653 4555 5 999999999999999999999999
Q ss_pred eEEEEEccCCceEEe-ee---------------------cCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 514 EAIVWDRVSREVKLK-NM---------------------LYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 514 ~v~iwd~~~~~~~~~-~~---------------------~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
++++||+........ .+ ..+......++|+||+++|++++.||.+++|++..
T Consensus 263 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 263 TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 999999865421100 00 01122347799999999999999999999999853
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=8.9e-29 Score=251.48 Aligned_cols=282 Identities=17% Similarity=0.229 Sum_probs=216.9
Q ss_pred eEEeecCCCCeEEEe--CCCEEEEEeCCCC----ccccccccCCCCcEEEEECC-CCCEEEEEeCCCcEEEEcCCCCc--
Q 007283 20 ILISGHPKSNSILYT--NGRSVIILDLSNP----LQVSIYGEHAYPATVARFSP-NGEWIASADVSGTVRIWGAHNDH-- 90 (609)
Q Consensus 20 ~~~~~~~~~~~l~~~--~~~~~~i~~~~~~----~~~~~~~~h~~~v~~~~~sp-~g~~las~~~d~~i~vWd~~~~~-- 90 (609)
..++++|+...+++. .++.+.||++.+. .....+.+|.+.|++++|+| ++++||+|+.||+|+|||+.+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 358888887655543 3579999999654 23445789999999999999 99999999999999999998763
Q ss_pred ----eeeEEEeecccceeEEEECCCC-CEEEEEECCCCcceEEEEEcCCCCeeEEE--ecCCccEEEEEEeeCCCeEEEE
Q 007283 91 ----VLKKEFRVLSGRIDDLQWSPDG-LRIVACGDGKGKSLVRAFMWDSGTNVGEF--DGHSRRVLSCAFKPSRPFRIAT 163 (609)
Q Consensus 91 ----~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~i~t 163 (609)
.....+..|...|.+++|+|++ .+|++++.+. .+++|+.+.+..+..+ .+|...|.+++|+|++.. +++
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~ 193 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN---VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL-ICT 193 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS---CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC-EEE
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC---EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE-EEE
Confidence 2235678899999999999998 5777776543 4788888888888888 889999999999999875 999
Q ss_pred ecCCCeEEEEeCCCCceeeec-cCcccc-eEEEEEcCCCCEEEEE---eCCCcEEEEeCCCCccccccCcCCCCccceEE
Q 007283 164 CGEDFLVNFYEGPPFKFKLSH-RGHSNF-VNCVRFSPDGSKFISV---SSDKKGIIYDGKTADKIGELSPEDGHKGSVYA 238 (609)
Q Consensus 164 ~~~d~~i~~~~~~~~~~~~~~-~~h~~~-v~~l~~s~dg~~l~s~---~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~ 238 (609)
++.|+.+++||...++....+ .+|... +.++.|+|++.+|++| +.|+.+++||..+++...... ...|...|.+
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~ 272 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ-ELDTSSGVLL 272 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE-ECCCCSSCEE
T ss_pred EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE-eccCCCceeE
Confidence 999999999999988888777 788776 8999999999999998 789999999998866422211 1246778999
Q ss_pred EEECCCCCeEEE-EeCCCcEEEeecccCCC-CceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCC
Q 007283 239 VSWSPDGKQVLT-ASADKSAKVWDISEDNH-GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSAND 312 (609)
Q Consensus 239 l~~spd~~~l~s-~s~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~ 312 (609)
++|+|++++|++ ++.|+.|++||+..... ......+. .. ..+..+.|.++..+.++.++.+++|++..
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~--~~----~~v~~~~~sp~~~~~~s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS--SK----ESQRGMGYMPKRGLEVNKCEIARFYKLHE 342 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC--CS----SCCSEEEECCGGGSCGGGTEEEEEEEEET
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc--cC----CcccceEEecccccceecceeEEEEEcCC
Confidence 999999999865 55799999999975321 11222222 11 12233445544333345677889998653
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.9e-28 Score=229.76 Aligned_cols=285 Identities=13% Similarity=0.091 Sum_probs=179.5
Q ss_pred EEEEeCCCcEEEEcCCCCc--eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEE
Q 007283 72 IASADVSGTVRIWGAHNDH--VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVL 149 (609)
Q Consensus 72 las~~~d~~i~vWd~~~~~--~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 149 (609)
|++++ ..+|++|+..++. .+.+.+.++..+|..++|.||-..|+++.-|+ -+...|.
T Consensus 57 ~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--------------------~~~~~v~ 115 (356)
T 2w18_A 57 IITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGN--------------------LEIREIR 115 (356)
T ss_dssp EEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECS--------------------SSEEEEE
T ss_pred EEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeecc--------------------ccccceE
Confidence 34554 5789999998863 35567888899999999999987777765332 2456799
Q ss_pred EEEEeeC----CCeEEEEecCCCeEEEEeCCCCceeee-ccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 007283 150 SCAFKPS----RPFRIATCGEDFLVNFYEGPPFKFKLS-HRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIG 224 (609)
Q Consensus 150 ~~~~~p~----~~~~i~t~~~d~~i~~~~~~~~~~~~~-~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~ 224 (609)
+++|+|+ +.. +++++.+ +.+|....++.... ..+|.+.|..++|+|+|+.++
T Consensus 116 sla~spd~~~~~~~-l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~-------------------- 172 (356)
T 2w18_A 116 ALFCSSDDESEKQV-LLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKE-------------------- 172 (356)
T ss_dssp EECC------CCEE-EEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEE--------------------
T ss_pred EEEECCCccccccE-EEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceee--------------------
Confidence 9999999 664 6666643 56665544443333 234444444444444444332
Q ss_pred ccCcCCCCccceEEEEECC---CCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEc
Q 007283 225 ELSPEDGHKGSVYAVSWSP---DGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSL 301 (609)
Q Consensus 225 ~~~~~~~h~~~V~~l~~sp---d~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (609)
.+ .+|+..+..++|+| ++.+|++++.|++|++||+. .++.++++...+
T Consensus 173 s~---~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~---TGk~l~tL~g~~----------------------- 223 (356)
T 2w18_A 173 NQ---FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK---TGQLLKKMHIDD----------------------- 223 (356)
T ss_dssp EE---EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT---TCCEEEEEECCC-----------------------
T ss_pred ee---ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC---CCcEEEEEcCCC-----------------------
Confidence 22 25788889999999 78999999999999999997 345554442110
Q ss_pred CCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEE
Q 007283 302 GGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIV 381 (609)
Q Consensus 302 ~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (609)
.|...+.+++|++ ++.++++++.+..
T Consensus 224 --------------------~~v~~v~~vafSp-dG~~lvs~s~~~~--------------------------------- 249 (356)
T 2w18_A 224 --------------------SYQASVCHKAYSE-MGLLFIVLSHPCA--------------------------------- 249 (356)
T ss_dssp -----------------------CCCEEEEEEE-TTEEEEEEC-------------------------------------
T ss_pred --------------------cceeeeEEEEECC-CCCEEEEeccCCC---------------------------------
Confidence 0112333444443 2233333221110
Q ss_pred EEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCE
Q 007283 382 TSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSE 461 (609)
Q Consensus 382 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~ 461 (609)
...
T Consensus 250 -----------------------------------------------------------------------------~w~ 252 (356)
T 2w18_A 250 -----------------------------------------------------------------------------KES 252 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------------------------cce
Confidence 012
Q ss_pred EEEEeCCCcEEEEEecCCeeeeeEE---EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceE
Q 007283 462 AIIGSQDGKLRVYSIRGDTLTEEAV---LEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARIN 538 (609)
Q Consensus 462 l~~gs~dg~i~iw~~~~~~~~~~~~---~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~ 538 (609)
+++|+.|++|++||..++....... ..+|.+.+.+..+ ++.++|+++.|++|+|||+.+++. +..+.+|...+.
T Consensus 253 laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~-l~tL~gH~~~vv 329 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC-TALLPPVSDQHW 329 (356)
T ss_dssp -----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE-EEEECCC--CCC
T ss_pred eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE-EEEecCCCCCeE
Confidence 5667777777777776665422111 1356555444444 488999999999999999988765 345677887655
Q ss_pred -EEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 539 -CLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 539 -~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
+++|||||++|++|+.|++|+|||+
T Consensus 330 s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEecC
Confidence 6899999999999999999999985
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-27 Score=245.82 Aligned_cols=312 Identities=13% Similarity=0.063 Sum_probs=220.6
Q ss_pred ccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC---eeEEEec---------------------------------
Q 007283 100 SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT---NVGEFDG--------------------------------- 143 (609)
Q Consensus 100 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------------------------------- 143 (609)
..++.+++|+|||++|+++.++ .+++|+...+. .+..+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~----~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKN----CILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETT----EEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCC----eEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 3578999999999977776543 36777777777 5555543
Q ss_pred ---------------------CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCC--CCceeeecc--CcccceEEEEEcC
Q 007283 144 ---------------------HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGP--PFKFKLSHR--GHSNFVNCVRFSP 198 (609)
Q Consensus 144 ---------------------h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~--~~~~~~~~~--~h~~~v~~l~~s~ 198 (609)
|...|.+++|+|++..++++|+.|+.+++|+.. .++....+. .|...|++++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 333799999999999767999999999999988 676666665 5678899999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCcccc-ccCcCCCCccceEEEEECCC---CCeEEEEeCCCcEEEeecccCCCCceEEEe
Q 007283 199 DGSKFISVSSDKKGIIYDGKTADKIG-ELSPEDGHKGSVYAVSWSPD---GKQVLTASADKSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 199 dg~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~h~~~V~~l~~spd---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 274 (609)
+|++|++++.|+.+.+|+..+++... ......+|.+.|++++|+|+ +++|++++.|++|++||+.. ++....
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~---~~~~~~- 235 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ---CFIVDK- 235 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC---TTCEEE-
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC---Cceeee-
Confidence 99999999999999999988776553 22223479999999999999 99999999999999999852 111110
Q ss_pred ccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEec
Q 007283 275 TPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~ 354 (609)
.+.+|...|.+++|+ ++.++++++.|++|++|+.
T Consensus 236 --------------------------------------------~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~ 269 (450)
T 2vdu_B 236 --------------------------------------------WLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDW 269 (450)
T ss_dssp --------------------------------------------ECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEET
T ss_pred --------------------------------------------eecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEEC
Confidence 134688899999987 6789999999999999987
Q ss_pred CccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEE
Q 007283 355 GIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVL 434 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (609)
..+....... .... ...+...... .+..+..
T Consensus 270 ~~~~~~~~~~-----------------------------~~~~----~~~~~~~~~~--------~~~~~~~-------- 300 (450)
T 2vdu_B 270 KTGKNLSTFD-----------------------------YNSL----IKPYLNDQHL--------APPRFQN-------- 300 (450)
T ss_dssp TTCCEEEEEE-----------------------------CHHH----HGGGCCTTSB--------C--------------
T ss_pred CCCcEeeeec-----------------------------chhh----hhhhhhhccc--------ccccccc--------
Confidence 6542111000 0000 0000000000 0000000
Q ss_pred eeCCeeeEEeccCCceeEEEEcCCCCEEEEEe-CCCcEEEEEe--cC-CeeeeeEEEecCCCceEEEEECCCCCEEEEEe
Q 007283 435 LRGAEVVSTINLRFPVTASAIAPDGSEAIIGS-QDGKLRVYSI--RG-DTLTEEAVLEKHRGAVSVIRYSPDVSMFASGD 510 (609)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs-~dg~i~iw~~--~~-~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s 510 (609)
.........+..++++|+++++++++ .|+.|++|++ .. +.+.....+..| +.|.+++|+|++.++++++
T Consensus 301 ------~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 301 ------ENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred ------cccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 00001124578899999999999999 8999999999 43 233445567777 8899999999765555555
Q ss_pred C------CCeEEEEEcc
Q 007283 511 V------NREAIVWDRV 521 (609)
Q Consensus 511 ~------d~~v~iwd~~ 521 (609)
. +..+.+|.+.
T Consensus 374 ~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 374 KESSGVQKNFAKFIEYN 390 (450)
T ss_dssp TTCCSSCCCSEEEEEEE
T ss_pred ccCCCCCCcceEEEEEE
Confidence 3 4557888754
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-27 Score=246.36 Aligned_cols=236 Identities=15% Similarity=0.121 Sum_probs=192.3
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCc---cccccc-------------------------------------------
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPL---QVSIYG------------------------------------------- 54 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~---~~~~~~------------------------------------------- 54 (609)
.+.++|+|+.|+...++.|.+||+.+++ .+..+.
T Consensus 9 ~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (450)
T 2vdu_B 9 NLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTA 88 (450)
T ss_dssp EEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC----------------------------------------
T ss_pred EEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccC
Confidence 6789999998888888999999998887 433333
Q ss_pred -----------cCCCCcEEEEECCCCCEE-EEEeCCCcEEEEcCC--CCceeeEEEe--ecccceeEEEECCCCCEEEEE
Q 007283 55 -----------EHAYPATVARFSPNGEWI-ASADVSGTVRIWGAH--NDHVLKKEFR--VLSGRIDDLQWSPDGLRIVAC 118 (609)
Q Consensus 55 -----------~h~~~v~~~~~sp~g~~l-as~~~d~~i~vWd~~--~~~~~~~~~~--~~~~~v~~~~~spdg~~l~~~ 118 (609)
+|.+.|++++|+|+|++| |+++.||+|+|||+. +++.+ ..+. .+...|.+++|+|||++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 89 AKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL-KLRKRFCFSKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp -----------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE-EEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred ccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee-eeeecccCCCCceEEEEcCCCCEEEEE
Confidence 344579999999999996 899999999999998 65543 3343 566889999999999999988
Q ss_pred ECCCCcceEEEEEcCCCCee----EEEecCCccEEEEEEeeC---CCeEEEEecCCCeEEEEeCCCCceeee-ccCcccc
Q 007283 119 GDGKGKSLVRAFMWDSGTNV----GEFDGHSRRVLSCAFKPS---RPFRIATCGEDFLVNFYEGPPFKFKLS-HRGHSNF 190 (609)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~p~---~~~~i~t~~~d~~i~~~~~~~~~~~~~-~~~h~~~ 190 (609)
+.+. .+++|+...+... ..+.+|...|.+++|+|+ +. .+++|+.|+.|++||....+.... +.+|...
T Consensus 168 ~~~g---~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 168 DKFG---DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp ETTS---EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred eCCC---cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 6532 3445554444433 367889999999999999 65 599999999999999988877766 5689999
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcC----------------------CCCccceEEEEECCCCCeE
Q 007283 191 VNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPE----------------------DGHKGSVYAVSWSPDGKQV 248 (609)
Q Consensus 191 v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------------------~~h~~~V~~l~~spd~~~l 248 (609)
|.+++|+ ++++|++++.|+.|++||..+++.+..+... ..+...|.+++|+|++++|
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 9999999 9999999999999999999998876554310 0234579999999999999
Q ss_pred EEEe-CCCcEEEeec
Q 007283 249 LTAS-ADKSAKVWDI 262 (609)
Q Consensus 249 ~s~s-~d~~i~iwd~ 262 (609)
++++ .|+.|++|++
T Consensus 323 ~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 323 AFFVEATKCIIILEM 337 (450)
T ss_dssp EEEETTCSEEEEEEE
T ss_pred EEEECCCCeEEEEEe
Confidence 9999 8999999999
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=245.08 Aligned_cols=275 Identities=10% Similarity=0.051 Sum_probs=191.7
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 196 FSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 196 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
+.+++..|++|+.|+.|++||..+++.+..+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~----------- 104 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRGPCNRLLLLYPGN----------- 104 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEECSTTEEEEEETTT-----------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEecCCCeEEEEEccC-----------
Confidence 34577899999999999999999988776653 466888899998 99999999999999752
Q ss_pred cCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEec-CCCCEEEEEecCCcEEEEec
Q 007283 276 PSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLN-IDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~t~s~dg~i~~W~~ 354 (609)
.+.+|+............+|...|.++++++ .++.++++++.||+|++|+.
T Consensus 105 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~ 156 (343)
T 3lrv_A 105 ----------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSY 156 (343)
T ss_dssp ----------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEES
T ss_pred ----------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEEC
Confidence 1122222211100111235778899999875 14579999999999999986
Q ss_pred CccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEE
Q 007283 355 GIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVL 434 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (609)
..+..... .
T Consensus 157 ~~~~~~~~-----------------------------~------------------------------------------ 165 (343)
T 3lrv_A 157 EDDSQYIV-----------------------------H------------------------------------------ 165 (343)
T ss_dssp SSSCEEEE-----------------------------E------------------------------------------
T ss_pred CCCcEEEE-----------------------------E------------------------------------------
Confidence 53210000 0
Q ss_pred eeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEec-CCCceEEEEECCCCCEEEEEeCCC
Q 007283 435 LRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEK-HRGAVSVIRYSPDVSMFASGDVNR 513 (609)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~-h~~~i~~v~~s~~~~~l~s~s~d~ 513 (609)
...+...+.+++++|+|.++|+|+.||.|++||++++... ...+.. |.+.|.+++|+|++.++++++ |+
T Consensus 166 --------~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~ 235 (343)
T 3lrv_A 166 --------SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ 235 (343)
T ss_dssp --------CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC-CEECCCCTTSCEEEEEECTTSSEEEEEE-SS
T ss_pred --------ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC-ccEEeccCCCCEEEEEEeCCCCEEEEEe-CC
Confidence 0001234788999999999999999999999999876542 134666 999999999999999999999 55
Q ss_pred eEEEEEccCCceEE--eeecCCCCceE--EEEECCCCcEEEEEeC-CCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-
Q 007283 514 EAIVWDRVSREVKL--KNMLYHTARIN--CLAWSPNNSMVATGSL-DTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT- 587 (609)
Q Consensus 514 ~v~iwd~~~~~~~~--~~~~~h~~~i~--~l~~s~d~~~l~s~s~-D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s- 587 (609)
+|++||+.+.+... ..+..|...+. +++|+|++++|++++. |+.|++|++.... ..... ..+..+.|.
T Consensus 236 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~-~~~~~-----~~~~~~~~~~ 309 (343)
T 3lrv_A 236 TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT-KNWTK-----DEESALCLQS 309 (343)
T ss_dssp BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT-CSEEE-----EEEEECCC--
T ss_pred eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc-cceEe-----cCceeEecCc
Confidence 99999987764321 11112334444 6999999999999998 9999999996533 21221 234445554
Q ss_pred ---CCCeEEEEeCCCcEEEE
Q 007283 588 ---DEHSVVSSGEDACVRVW 604 (609)
Q Consensus 588 ---~~~~l~s~s~D~~i~~W 604 (609)
+...+++++.|+.+.++
T Consensus 310 ~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 310 DTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp --CCCCEEEEEEETTEEEEE
T ss_pred cccccceeEEEecCCceEEE
Confidence 33456666666666665
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=269.83 Aligned_cols=253 Identities=23% Similarity=0.400 Sum_probs=199.6
Q ss_pred eeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCccccccCcCCCCccceEEEEECCC--CCeEEEEeCCCcE
Q 007283 182 LSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK--TADKIGELSPEDGHKGSVYAVSWSPD--GKQVLTASADKSA 257 (609)
Q Consensus 182 ~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~h~~~V~~l~~spd--~~~l~s~s~d~~i 257 (609)
..+.+|...|++++|+|+|++|++|+.||.|++||.. +++.+..+ .+|.+.|++++|+|+ +++|++++.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l---~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL---TGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec---cCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 3467899999999999999999999999999999987 33444444 479999999999998 9999999999999
Q ss_pred EEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCC
Q 007283 258 KVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDP 337 (609)
Q Consensus 258 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 337 (609)
++||+.. ++... ...+.+|.
T Consensus 80 ~vwd~~~---~~~~~--------------------------------------------~~~~~~h~------------- 99 (753)
T 3jro_A 80 LIWKEEN---GRWSQ--------------------------------------------IAVHAVHS------------- 99 (753)
T ss_dssp EEEEEET---TEEEE--------------------------------------------EEEECCCS-------------
T ss_pred EEEECCC---Ccccc--------------------------------------------cccccCCC-------------
Confidence 9999752 10000 00011111
Q ss_pred CEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEee
Q 007283 338 KVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVA 417 (609)
Q Consensus 338 ~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (609)
T Consensus 100 -------------------------------------------------------------------------------- 99 (753)
T 3jro_A 100 -------------------------------------------------------------------------------- 99 (753)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC--CCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceE
Q 007283 418 LHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD--GSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVS 495 (609)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~--g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~ 495 (609)
.++.+++++|+ ++.+++|+.||.|++||+..+.......+.+|...|.
T Consensus 100 ------------------------------~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 100 ------------------------------ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp ------------------------------SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred ------------------------------CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 23566777887 8888999999999999987664444556788999999
Q ss_pred EEEECC-------------CCCEEEEEeCCCeEEEEEccCCc---eEEeeecCCCCceEEEEECCC---CcEEEEEeCCC
Q 007283 496 VIRYSP-------------DVSMFASGDVNREAIVWDRVSRE---VKLKNMLYHTARINCLAWSPN---NSMVATGSLDT 556 (609)
Q Consensus 496 ~v~~s~-------------~~~~l~s~s~d~~v~iwd~~~~~---~~~~~~~~h~~~i~~l~~s~d---~~~l~s~s~D~ 556 (609)
+++|+| ++.++++|+.|++|++||+.+.. .....+..|...|++++|+|+ +++|++|+.||
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 999999 59999999999999999987653 233456789999999999999 99999999999
Q ss_pred eEEEEEcCCCCCc---ceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 557 CVIIYEIDKPASS---RMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 557 ~v~vw~~~~~~~~---~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
+|++||+...... ......+|.+.|++++|+ ++++|++++.||.|++|++.
T Consensus 230 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 9999999764211 122234688999999999 77899999999999999986
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.5e-26 Score=235.91 Aligned_cols=354 Identities=12% Similarity=0.027 Sum_probs=243.9
Q ss_pred CCcEEEEECCCCCEEEEEeC-CCcEEEEcCCCCceeeEEEeecccceeEEE---ECCCCCEEEEEECCCCc-c-------
Q 007283 58 YPATVARFSPNGEWIASADV-SGTVRIWGAHNDHVLKKEFRVLSGRIDDLQ---WSPDGLRIVACGDGKGK-S------- 125 (609)
Q Consensus 58 ~~v~~~~~sp~g~~las~~~-d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~---~spdg~~l~~~~~~~~~-~------- 125 (609)
..|..+.|+|....++.... ....+++.. .....+..++ |+|++..++........ .
T Consensus 28 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (433)
T 3bws_A 28 TEIVKFSIHPYKGTVIRLGEEILPFKVLEM-----------DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKP 96 (433)
T ss_dssp EEEEEEEEECCTTCEEEETTEECCEEEEEE-----------ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSG
T ss_pred cEEEEEecccccCceEEcCceecceeeeec-----------ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeeccc
Confidence 34677778886544443321 112222221 1233456677 88887776655422111 1
Q ss_pred ---eEEEEEcCC--C--CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee-----eccCcccceEE
Q 007283 126 ---LVRAFMWDS--G--TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL-----SHRGHSNFVNC 193 (609)
Q Consensus 126 ---~~~~~~~~~--~--~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~-----~~~~h~~~v~~ 193 (609)
.+++|.++. + ..+..+..+. .+.+++|+| +..++++++.++.+.+||..+++... .+.+|...|.+
T Consensus 97 ~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 97 EELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp GGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred CCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 114666664 3 2344454443 456899999 55568888999999999998887765 45688999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEE-EEeCCCcEEEeecccCCCCceEE
Q 007283 194 VRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVL-TASADKSAKVWDISEDNHGKLKK 272 (609)
Q Consensus 194 l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~-s~s~d~~i~iwd~~~~~~~~~~~ 272 (609)
++|+|++.++++++.|+.+++||..+++.+..+. .|...+.+++|+|++++++ +++.|+.|++||+.. ++...
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~---~~~~~ 248 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD---LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT---KLEIR 248 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE---CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT---TEEEE
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc---CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC---CcEEE
Confidence 9999999999999999999999999888776653 5788899999999999885 455799999999862 22222
Q ss_pred EeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe--------
Q 007283 273 TLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS-------- 344 (609)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s-------- 344 (609)
.+. +...+.++++++ +++.+++++
T Consensus 249 ~~~-----------------------------------------------~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 249 KTD-----------------------------------------------KIGLPRGLLLSK-DGKELYIAQFSASNQES 280 (433)
T ss_dssp ECC-----------------------------------------------CCSEEEEEEECT-TSSEEEEEEEESCTTCS
T ss_pred Eec-----------------------------------------------CCCCceEEEEcC-CCCEEEEEECCCCcccc
Confidence 111 112245566654 345666665
Q ss_pred cCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEE
Q 007283 345 YDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELV 424 (609)
Q Consensus 345 ~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (609)
.|+.|++|+...+.. +
T Consensus 281 ~dg~i~~~d~~~~~~----------~------------------------------------------------------ 296 (433)
T 3bws_A 281 GGGRLGIYSMDKEKL----------I------------------------------------------------------ 296 (433)
T ss_dssp CCEEEEEEETTTTEE----------E------------------------------------------------------
T ss_pred CCCeEEEEECCCCcE----------E------------------------------------------------------
Confidence 477888886543200 0
Q ss_pred EEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCE-EEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCC
Q 007283 425 LVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSE-AIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDV 503 (609)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~-l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~ 503 (609)
..+.+...+..++++|+++. +++++.|+.|++|++.++... ..+ .+...+.+++|+|+|
T Consensus 297 -----------------~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~--~~~-~~~~~~~~~~~s~dg 356 (433)
T 3bws_A 297 -----------------DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ--KSI-PVFDKPNTIALSPDG 356 (433)
T ss_dssp -----------------EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE--EEE-ECSSSEEEEEECTTS
T ss_pred -----------------eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE--EEe-cCCCCCCeEEEcCCC
Confidence 00000113567889999975 466789999999999876653 233 367889999999999
Q ss_pred CEEEEEeC---------------CCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeC-CCeEEEEEcC
Q 007283 504 SMFASGDV---------------NREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSL-DTCVIIYEID 564 (609)
Q Consensus 504 ~~l~s~s~---------------d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~-D~~v~vw~~~ 564 (609)
+++++++. |+.+++||..+.+... .+. +...+.+++|+||+++|++++. |++|++|+++
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE-FWE-AGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE-EEE-CSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEE-Eec-CCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 99888876 5799999987765432 233 3567999999999999988875 9999999975
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.6e-28 Score=248.30 Aligned_cols=284 Identities=14% Similarity=0.076 Sum_probs=175.4
Q ss_pred CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCce-----eeeccCcccceEEEEEcC--------CCCEEEEEeCCC
Q 007283 144 HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKF-----KLSHRGHSNFVNCVRFSP--------DGSKFISVSSDK 210 (609)
Q Consensus 144 h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~-----~~~~~~h~~~v~~l~~s~--------dg~~l~s~~~d~ 210 (609)
|...+....++|++ ..+++++.|+++++|+...... ...+.||.+.|++++|+| ||++||+|+.|+
T Consensus 88 ~~~~~~~~~~~~~~-~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 88 HDGDGNVNSSPVYS-LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ---------CCEEE-EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred cCCCcceeecCCCC-CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 33333334444554 4699999999999999776543 234789999999999998 889999999999
Q ss_pred cEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 211 KGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+++|||..++..+..+ .+|.+.|.+++|+|++. +|++++.|++|++||+... +.......... ...
T Consensus 167 tv~~Wd~~~~~~~~~~---~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~---~~~~~~~~~~~-~~~------ 233 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAG---YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN---LSAEENSQTEL-VKN------ 233 (393)
T ss_dssp EEEEEEEETTEEEEEE---EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC---C-----------CSC------
T ss_pred eEEEEECCCCceeeee---cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC---cccccccccCC-ccc------
Confidence 9999998877665544 26888999999999875 8999999999999998742 22111110000 000
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQ 369 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~ 369 (609)
...+...... ........+|...+.++.+...++..+++++.|+++++|++..+........+..
T Consensus 234 ----~~~~s~~~~~----------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~- 298 (393)
T 4gq1_A 234 ----PWLLTLNTLP----------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM- 298 (393)
T ss_dssp ----CCSEEEESGG----------GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------
T ss_pred ----ceEEeccccc----------ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC-
Confidence 0000000000 0011234578899999999877888999999999999998754321111000000
Q ss_pred eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEec-cCC
Q 007283 370 IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTIN-LRF 448 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 448 (609)
.+....... + ..... ...
T Consensus 299 ------------------~~~~~~~~~-------------------------~------------------~~~~~~~~~ 317 (393)
T 4gq1_A 299 ------------------KLGPKNLLP-------------------------N------------------VQGISLFPS 317 (393)
T ss_dssp -----------------------CCSC-------------------------S------------------EEEECSSCC
T ss_pred ------------------ccccEEEcc-------------------------c------------------cccccccCc
Confidence 000000000 0 00000 011
Q ss_pred ceeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEc
Q 007283 449 PVTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDR 520 (609)
Q Consensus 449 ~~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~ 520 (609)
.+.++...+ ++.++++|+.||+|++||+..+.. ...+.+|..+|.+|+|||||++||+++.|+ +.+|.+
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 122222222 555678889999999999987654 345667889999999999999999998766 666654
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.1e-26 Score=236.40 Aligned_cols=350 Identities=14% Similarity=0.116 Sum_probs=240.6
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEE---ECCCCCEEEE--------------EeCCCcEEE
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVAR---FSPNGEWIAS--------------ADVSGTVRI 83 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~---~sp~g~~las--------------~~~d~~i~v 83 (609)
.+.++|..+.++...+..+...-+ ...+...+..++ |+|+++.++. +..+++++|
T Consensus 32 ~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 103 (433)
T 3bws_A 32 KFSIHPYKGTVIRLGEEILPFKVL--------EMDKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKL 103 (433)
T ss_dssp EEEEECCTTCEEEETTEECCEEEE--------EEETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCE
T ss_pred EEecccccCceEEcCceecceeee--------ecccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEE
Confidence 677888766666554432111100 011233456666 7777766553 233444466
Q ss_pred EcCCC--Cc-eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeE-----EEecCCccEEEEEEee
Q 007283 84 WGAHN--DH-VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG-----EFDGHSRRVLSCAFKP 155 (609)
Q Consensus 84 Wd~~~--~~-~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~p 155 (609)
|.++. +. .....+.. ...+.+++|+|++ .+++++... ..+++|+.+.++... .+.+|...|.+++|+|
T Consensus 104 ~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~~~-~~~~~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 104 IALDKEGITHRFISRFKT-GFQPKSVRFIDNT-RLAIPLLED--EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp EECCBTTCSEEEEEEEEC-SSCBCCCEESSSS-EEEEEBTTS--SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred EEECCCCCcceEEEEEcC-CCCceEEEEeCCC-eEEEEeCCC--CeEEEEECCCCeEeeecCcccccccCCceeEEEEcC
Confidence 65543 32 12223333 3456799999955 455444322 246778877777665 3458889999999998
Q ss_pred CCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEE-EeCCCcEEEEeCCCCccccccCcCCCCcc
Q 007283 156 SRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFIS-VSSDKKGIIYDGKTADKIGELSPEDGHKG 234 (609)
Q Consensus 156 ~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~h~~ 234 (609)
++. .+++++.|+.+++||..+.+....+..|...+.+++|+|+++.+++ ++.|+.+.+||..+++.+..+. +..
T Consensus 180 ~~~-~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~----~~~ 254 (433)
T 3bws_A 180 HNE-LWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD----KIG 254 (433)
T ss_dssp GTE-EEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC----CCS
T ss_pred CCE-EEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec----CCC
Confidence 876 5899999999999999988888888889999999999999998754 4579999999999888766553 234
Q ss_pred ceEEEEECCCCCeEEEEe--------CCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEE
Q 007283 235 SVYAVSWSPDGKQVLTAS--------ADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTIS 306 (609)
Q Consensus 235 ~V~~l~~spd~~~l~s~s--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 306 (609)
.+.+++|+|+++++++++ .|+.|++||+.. ++.....
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~-------------------------------- 299 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTI-------------------------------- 299 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEE--------------------------------
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeec--------------------------------
Confidence 599999999999999988 488999999862 2221111
Q ss_pred EEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEecc
Q 007283 307 IFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFD 386 (609)
Q Consensus 307 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 386 (609)
.|...+..+++++..+.++++++.|+.|++|+...+..
T Consensus 300 ---------------~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~--------------------------- 337 (433)
T 3bws_A 300 ---------------GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV--------------------------- 337 (433)
T ss_dssp ---------------EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE---------------------------
T ss_pred ---------------cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE---------------------------
Confidence 12234456666654445778889999999997643210
Q ss_pred ceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEe
Q 007283 387 NKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGS 466 (609)
Q Consensus 387 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs 466 (609)
...+.....+.+++++|+|+++++++
T Consensus 338 ------------------------------------------------------~~~~~~~~~~~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 338 ------------------------------------------------------QKSIPVFDKPNTIALSPDGKYLYVSC 363 (433)
T ss_dssp ------------------------------------------------------EEEEECSSSEEEEEECTTSSEEEEEE
T ss_pred ------------------------------------------------------EEEecCCCCCCeEEEcCCCCEEEEEe
Confidence 00001112366788899999888877
Q ss_pred C---------------CCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeC-CCeEEEEEcc
Q 007283 467 Q---------------DGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDV-NREAIVWDRV 521 (609)
Q Consensus 467 ~---------------dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~-d~~v~iwd~~ 521 (609)
. ||.|++||+.++... ..+.. ...+.+++|+|+|+++++++. |+++++|++.
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK--EFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETTTTEEE--EEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cCCCccccccccccccceEEEEEECCCCcEE--EEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 6 579999999877653 33343 457999999999999998875 9999999964
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.4e-26 Score=230.68 Aligned_cols=333 Identities=15% Similarity=0.128 Sum_probs=234.0
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccE
Q 007283 69 GEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRV 148 (609)
Q Consensus 69 g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 148 (609)
+.++++++.|++|++||+.+++.+ ..+..+ ..+.+++|+|||++|++++... ..+++|+...++.+..+..+. .+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~-~~~~~~-~~~~~~~~s~dg~~l~~~~~~d--~~i~v~d~~~~~~~~~~~~~~-~v 76 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVT-ATIPVG-SNPMGAVISPDGTKVYVANAHS--NDVSIIDTATNNVIATVPAGS-SP 76 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEE-EEEECS-SSEEEEEECTTSSEEEEEEGGG--TEEEEEETTTTEEEEEEECSS-SE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEE-EEeecC-CCcceEEECCCCCEEEEECCCC--CeEEEEECCCCeEEEEEECCC-Cc
Confidence 356789999999999999887643 345544 4589999999999886665322 257777777777777777665 89
Q ss_pred EEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCccccccC
Q 007283 149 LSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKF-ISVSSDKKGIIYDGKTADKIGELS 227 (609)
Q Consensus 149 ~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~s~~~d~~i~iwd~~~~~~~~~~~ 227 (609)
.+++|+|++..++++++.++.+.+||...++....+..|. .+.+++|+|+|+.| ++++.|+.+++||..+++.+..+.
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 9999999999767788888999999999888776666544 58999999999977 678889999999999888776653
Q ss_pred cCCCCccceEEEEECCCCCeE-EEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEE
Q 007283 228 PEDGHKGSVYAVSWSPDGKQV-LTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTIS 306 (609)
Q Consensus 228 ~~~~h~~~V~~l~~spd~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 306 (609)
+...+.+++|+|++++| ++++.|+.|++||+.. ++....+
T Consensus 156 ----~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~-------------------------------- 196 (391)
T 1l0q_A 156 ----VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT---NSVIDTV-------------------------------- 196 (391)
T ss_dssp ----CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEE--------------------------------
T ss_pred ----cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEE--------------------------------
Confidence 23457999999999887 6778899999999863 2222111
Q ss_pred EEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe---cCCcEEEEecCccccceeccccccceeEeeeeCCcEEEE
Q 007283 307 IFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS---YDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTS 383 (609)
Q Consensus 307 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s---~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (609)
.+...+.++++++ +++.++.++ .|+.|++|+...+..
T Consensus 197 ---------------~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~------------------------ 236 (391)
T 1l0q_A 197 ---------------KVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKI------------------------ 236 (391)
T ss_dssp ---------------ECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEE------------------------
T ss_pred ---------------ecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeE------------------------
Confidence 1223455666654 345566555 689999997643210
Q ss_pred eccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEE-
Q 007283 384 GFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEA- 462 (609)
Q Consensus 384 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l- 462 (609)
...+.....+.+++++|+|+++
T Consensus 237 ---------------------------------------------------------~~~~~~~~~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 237 ---------------------------------------------------------TARIPVGPDPAGIAVTPDGKKVY 259 (391)
T ss_dssp ---------------------------------------------------------EEEEECCSSEEEEEECTTSSEEE
T ss_pred ---------------------------------------------------------EEEEecCCCccEEEEccCCCEEE
Confidence 0000011235678899999977
Q ss_pred EEEeCCCcEEEEEecCCeeeeeEEEecCCCceE---EEE------------ECCCC----------CEEEEEeCCCeEEE
Q 007283 463 IIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVS---VIR------------YSPDV----------SMFASGDVNREAIV 517 (609)
Q Consensus 463 ~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~---~v~------------~s~~~----------~~l~s~s~d~~v~i 517 (609)
++++.|+.|++||+.++.+. ..+..|..+.. .+. |+.+. ..+.+.+.|.+.++
T Consensus 260 ~s~~~d~~v~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (391)
T 1l0q_A 260 VALSFXNTVSVIDTATNTIT--ATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWK 337 (391)
T ss_dssp EEETTTTEEEEEETTTTEEE--EEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEE
T ss_pred EEcCCCCEEEEEECCCCcEE--EEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEE
Confidence 67788999999999877653 33444433211 122 32222 34667778999999
Q ss_pred EEccCCceEEeeecCCCCceEEEEECCCCcEEEEE
Q 007283 518 WDRVSREVKLKNMLYHTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 518 wd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~ 552 (609)
||+..+... .+..+ ...|+|+|.+.++.
T Consensus 338 W~~~~g~~~-----~~~~~--~~~~~~~g~y~~~~ 365 (391)
T 1l0q_A 338 WDFGDGSSS-----KKQNP--THTYSETGIYTVRL 365 (391)
T ss_dssp EECSSSCEE-----CSSSC--EECCSSCEEEEEEE
T ss_pred EECCCCccc-----CcCCC--eEEeCCCceEEEEE
Confidence 998765431 12222 36899999987654
No 122
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.2e-27 Score=245.09 Aligned_cols=248 Identities=18% Similarity=0.255 Sum_probs=202.4
Q ss_pred ccCcCceeEEeecCC-CCeEEEeC-CCEEEEEeCCC----------CccccccccCCCCcEEEEECCCCC-EEEEEeCCC
Q 007283 13 STERGRGILISGHPK-SNSILYTN-GRSVIILDLSN----------PLQVSIYGEHAYPATVARFSPNGE-WIASADVSG 79 (609)
Q Consensus 13 ~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~i~~~~~----------~~~~~~~~~h~~~v~~~~~sp~g~-~las~~~d~ 79 (609)
..|.+.+..+.++|+ ++.|+... .+.|.+|++.+ ......+.+|...|.+++|+|+++ +|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 445777789999998 55666654 47899999976 455566789999999999999999 999999999
Q ss_pred cEEEEcCCCCce------eeEEEeecccceeEEEECC-CCCEEEEEECCCCcceEEEEEcCCC---CeeEEEecCCccEE
Q 007283 80 TVRIWGAHNDHV------LKKEFRVLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRAFMWDSG---TNVGEFDGHSRRVL 149 (609)
Q Consensus 80 ~i~vWd~~~~~~------~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~v~ 149 (609)
+|+||++..... ....+..|...|.+++|+| ++..+++++++. .+++|+.... ..+..+..|...|.
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ---KLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS---EEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC---eEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999987321 1245667888999999999 566776766433 4777777765 56777889999999
Q ss_pred EEEEeeCCCeEEEEecCCCeEEEEeCCC-CceeeeccCcccceEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCccc----
Q 007283 150 SCAFKPSRPFRIATCGEDFLVNFYEGPP-FKFKLSHRGHSNFVNCVRFSPDGS-KFISVSSDKKGIIYDGKTADKI---- 223 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~~i~~~~~~~-~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~d~~i~iwd~~~~~~~---- 223 (609)
+++|+|++...+++|+.|+.|++||... ......+.+|...|.+++|+|+++ +|++++.|+.|+|||.......
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 361 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE 361 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence 9999999987899999999999999886 455667888999999999999985 7999999999999998762210
Q ss_pred -------cccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeecc
Q 007283 224 -------GELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDIS 263 (609)
Q Consensus 224 -------~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~~ 263 (609)
..+....+|...|.+++|+|++. +|++++.|+.|++|++.
T Consensus 362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 11112347899999999999999 89999999999999986
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.5e-27 Score=244.53 Aligned_cols=264 Identities=20% Similarity=0.313 Sum_probs=205.2
Q ss_pred ccccCCCCcEEEEECCC-CCEEEEEeCCCcEEEEcCCCC---------ceeeEEEeecccceeEEEECCCCC-EEEEEEC
Q 007283 52 IYGEHAYPATVARFSPN-GEWIASADVSGTVRIWGAHND---------HVLKKEFRVLSGRIDDLQWSPDGL-RIVACGD 120 (609)
Q Consensus 52 ~~~~h~~~v~~~~~sp~-g~~las~~~d~~i~vWd~~~~---------~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~ 120 (609)
...+|.+.|++++|+|+ +++||+++.||+|+||++.+. ......+..|...|.+++|+|++. +|++++.
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 35689999999999997 789999999999999999761 123356778999999999999998 7777654
Q ss_pred CCCcceEEEEEcCCCCe-------eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC---ceeeeccCcccc
Q 007283 121 GKGKSLVRAFMWDSGTN-------VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF---KFKLSHRGHSNF 190 (609)
Q Consensus 121 ~~~~~~~~~~~~~~~~~-------~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~---~~~~~~~~h~~~ 190 (609)
+. .+++|+...+.. ...+.+|...|.+++|+|++...|++++.|+.|++||.... +....+..|...
T Consensus 203 dg---~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 203 DH---TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp TS---CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred CC---eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 33 467777765322 35677999999999999976668999999999999998765 455667789999
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-ccccccCcCCCCccceEEEEECCCCC-eEEEEeCCCcEEEeecccCCC
Q 007283 191 VNCVRFSPDGS-KFISVSSDKKGIIYDGKTA-DKIGELSPEDGHKGSVYAVSWSPDGK-QVLTASADKSAKVWDISEDNH 267 (609)
Q Consensus 191 v~~l~~s~dg~-~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s~d~~i~iwd~~~~~~ 267 (609)
|++++|+|++. +|++|+.|+.|++||.+.. ..+..+ .+|.+.|.+++|+|+++ +|++++.|+.|++||+.....
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~---~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF---ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE---ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe---ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 99999999987 6899999999999999874 334444 36899999999999995 699999999999999864211
Q ss_pred CceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCC
Q 007283 268 GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDG 347 (609)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg 347 (609)
.. ..... . ++ .......+.+|...|.++++++..+.++++++.||
T Consensus 357 ~~---~~~~~-----~------------------~~---------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 357 EQ---STEDA-----E------------------DG---------PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 401 (430)
T ss_dssp CC---CHHHH-----H------------------HC---------CTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred cc---Ccccc-----c------------------cC---------CcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC
Confidence 00 00000 0 00 00111234678889999999876555999999999
Q ss_pred cEEEEecCc
Q 007283 348 LIVKWIQGI 356 (609)
Q Consensus 348 ~i~~W~~~~ 356 (609)
.|++|+...
T Consensus 402 ~i~iw~~~~ 410 (430)
T 2xyi_A 402 IMQVWQMAE 410 (430)
T ss_dssp EEEEEEECH
T ss_pred CEEEeEccc
Confidence 999998754
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=9.3e-26 Score=228.30 Aligned_cols=267 Identities=18% Similarity=0.171 Sum_probs=200.5
Q ss_pred eEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCccccccCcCCCCccceE
Q 007283 159 FRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKF-ISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVY 237 (609)
Q Consensus 159 ~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~ 237 (609)
.++++++.|+.+++||..+++....+.+|.. +.+++|+|+|+.| ++++.|+.+++||..+++.+..+. +...+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~----~~~~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP----AGSSPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE----CSSSEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE----CCCCcc
Confidence 4688999999999999999888887777754 8999999999976 677789999999999988776663 233899
Q ss_pred EEEECCCCCeEEE-EeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCC
Q 007283 238 AVSWSPDGKQVLT-ASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKS 316 (609)
Q Consensus 238 ~l~~spd~~~l~s-~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 316 (609)
+++|+|++++|+. ++.++.|++||+.. ++....+
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~---~~~~~~~------------------------------------------ 112 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTS---NTVAGTV------------------------------------------ 112 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEE------------------------------------------
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCC---CeEEEEE------------------------------------------
Confidence 9999999998754 45679999999863 2222111
Q ss_pred ceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccC
Q 007283 317 PLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQG 396 (609)
Q Consensus 317 ~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 396 (609)
. +...+.++++++....++++++.|+.|++|+...+..
T Consensus 113 ----~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~------------------------------------- 150 (391)
T 1l0q_A 113 ----K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV------------------------------------- 150 (391)
T ss_dssp ----E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-------------------------------------
T ss_pred ----e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-------------------------------------
Confidence 1 1234567777654434558899999999997643210
Q ss_pred CccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEE-EEEeCCCcEEEEE
Q 007283 397 DQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEA-IIGSQDGKLRVYS 475 (609)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l-~~gs~dg~i~iw~ 475 (609)
...+.....+..++++|+|+++ ++++.|+.|++||
T Consensus 151 --------------------------------------------~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 151 --------------------------------------------INTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp --------------------------------------------EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --------------------------------------------EEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 0000011235678899999987 6778899999999
Q ss_pred ecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEe---CCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEE-EE
Q 007283 476 IRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGD---VNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMV-AT 551 (609)
Q Consensus 476 ~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s---~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l-~s 551 (609)
+.++... ..+ .+...+.+++|+|+++++++++ .++.+++||+.+.+.. ..+..| ..+.+++|+||+++| ++
T Consensus 187 ~~~~~~~--~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~-~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 187 TVTNSVI--DTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT-ARIPVG-PDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp TTTTEEE--EEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE-EEEECC-SSEEEEEECTTSSEEEEE
T ss_pred CCCCeEE--EEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE-EEEecC-CCccEEEEccCCCEEEEE
Confidence 9877543 222 3567899999999999999888 6999999998776543 334444 458999999999877 67
Q ss_pred EeCCCeEEEEEcCCC
Q 007283 552 GSLDTCVIIYEIDKP 566 (609)
Q Consensus 552 ~s~D~~v~vw~~~~~ 566 (609)
++.|+.|++||+...
T Consensus 262 ~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 262 LSFXNTVSVIDTATN 276 (391)
T ss_dssp ETTTTEEEEEETTTT
T ss_pred cCCCCEEEEEECCCC
Confidence 789999999998753
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.6e-27 Score=240.89 Aligned_cols=270 Identities=10% Similarity=0.084 Sum_probs=167.8
Q ss_pred CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccc--ccCcCCCCccceEEEEECC--------CCCeEEEEeCCC
Q 007283 186 GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIG--ELSPEDGHKGSVYAVSWSP--------DGKQVLTASADK 255 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~~h~~~V~~l~~sp--------d~~~l~s~s~d~ 255 (609)
.|........+.+++.+|++++.|++++|||.++++... .+....+|.+.|++++|+| |+++|+++|.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 344555566677788899999999999999988776432 2233468999999999998 889999999999
Q ss_pred cEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecC
Q 007283 256 SAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNI 335 (609)
Q Consensus 256 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 335 (609)
+|++||+... ... ..+.+|...|.+++|++.
T Consensus 167 tv~~Wd~~~~---~~~----------------------------------------------~~~~~~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 167 TLIIWRLTDE---GPI----------------------------------------------LAGYPLSSPGISVQFRPS 197 (393)
T ss_dssp EEEEEEEETT---EEE----------------------------------------------EEEEECSSCEEEEEEETT
T ss_pred eEEEEECCCC---cee----------------------------------------------eeecCCCCCcEEEEECCC
Confidence 9999998521 110 123357788999999876
Q ss_pred CCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeE
Q 007283 336 DPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLS 415 (609)
Q Consensus 336 ~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (609)
++.++++++.|++|++|+...+............. ..+ ...
T Consensus 198 ~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~-----------------~~~----------------------~~s 238 (393)
T 4gq1_A 198 NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK-----------------NPW----------------------LLT 238 (393)
T ss_dssp EEEEEEEEETTSEEEEEETTCCC----------CS-----------------CCC----------------------SEE
T ss_pred CCceEEecCCCCEEEEEECCCCcccccccccCCcc-----------------cce----------------------EEe
Confidence 66789999999999999876542211100000000 000 000
Q ss_pred eeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEc-CCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCce
Q 007283 416 VALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIA-PDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAV 494 (609)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i 494 (609)
....... .......+...+.+++++ |||+.+++++.|+++++||+...... ..+..|...+
T Consensus 239 ~~~~~~~----------------~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~--~~l~~~~~~~ 300 (393)
T 4gq1_A 239 LNTLPLV----------------NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY--NEISDSTMKL 300 (393)
T ss_dssp EESGGGC----------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------
T ss_pred cccccce----------------eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC--ceEeeecCcc
Confidence 0000000 000001123456777765 89999999999999999998765432 2233444444
Q ss_pred EEEEECC--------------------CCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeC
Q 007283 495 SVIRYSP--------------------DVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSL 554 (609)
Q Consensus 495 ~~v~~s~--------------------~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~ 554 (609)
..+.++| ++.++++|+.|++|++||..+++... ....|...|++++|||||++||+++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~-~~~~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 301 GPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS-IPIQLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ---CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE-EEEECSSCEEEEEECTTSSEEEEEES
T ss_pred ccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE-EecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 3333332 34577889999999999988766533 35678899999999999999999998
Q ss_pred CCeEEEEEc
Q 007283 555 DTCVIIYEI 563 (609)
Q Consensus 555 D~~v~vw~~ 563 (609)
|| +.+|++
T Consensus 380 ~G-v~lvrL 387 (393)
T 4gq1_A 380 GS-VLLTRL 387 (393)
T ss_dssp SE-EEEEEE
T ss_pred CC-eEEEEE
Confidence 77 566654
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.9e-27 Score=260.54 Aligned_cols=250 Identities=20% Similarity=0.304 Sum_probs=207.1
Q ss_pred CccCcCceeEEeecCCCCeEEEeC-CCEEEEEeCC--CCccccccccCCCCcEEEEECCC--CCEEEEEeCCCcEEEEcC
Q 007283 12 PSTERGRGILISGHPKSNSILYTN-GRSVIILDLS--NPLQVSIYGEHAYPATVARFSPN--GEWIASADVSGTVRIWGA 86 (609)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~--~~~~~~~~~~h~~~v~~~~~sp~--g~~las~~~d~~i~vWd~ 86 (609)
...|++....+.++|+|+.|+++. ++.|.||++. +......+.+|.+.|++++|+|+ |++|++|+.||+|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 356788889999999999988874 6899999997 44556678899999999999998 999999999999999999
Q ss_pred CCCce-eeEEEeecccceeEEEECCC--CCEEEEEECCCCcceEEEEEcCCC--CeeEEEecCCccEEEEEEeeC-----
Q 007283 87 HNDHV-LKKEFRVLSGRIDDLQWSPD--GLRIVACGDGKGKSLVRAFMWDSG--TNVGEFDGHSRRVLSCAFKPS----- 156 (609)
Q Consensus 87 ~~~~~-~~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~p~----- 156 (609)
.+++. ....+..|...|.+++|+|+ +..+++++.+. .+++|+...+ .....+.+|...|.+++|+|.
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg---~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG---KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS---EEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC---cEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 88652 33456778999999999999 99999887544 5777777765 334567899999999999995
Q ss_pred -------CCeEEEEecCCCeEEEEeCCCC----ceeeeccCcccceEEEEEcCC---CCEEEEEeCCCcEEEEeCCCCcc
Q 007283 157 -------RPFRIATCGEDFLVNFYEGPPF----KFKLSHRGHSNFVNCVRFSPD---GSKFISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 157 -------~~~~i~t~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~~l~~s~d---g~~l~s~~~d~~i~iwd~~~~~~ 222 (609)
+...+++|+.|+.|++||.... .....+.+|...|++++|+|+ +.+|++++.|+.|++||..+++.
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 2335999999999999997654 455677899999999999999 89999999999999999887642
Q ss_pred c--cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeeccc
Q 007283 223 I--GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISE 264 (609)
Q Consensus 223 ~--~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~ 264 (609)
. .......+|.+.|++++|+|++++|++++.||.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 1 12222346889999999999999999999999999999874
No 127
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.9e-26 Score=225.84 Aligned_cols=233 Identities=9% Similarity=0.010 Sum_probs=183.4
Q ss_pred EeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCC---------CCce
Q 007283 22 ISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAH---------NDHV 91 (609)
Q Consensus 22 ~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~---------~~~~ 91 (609)
.+..++++.|+++. ++.|.+||+.+++.+..+. ...|.+++|+|+ +++++.|++|++|+.. +++.
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34445667777664 6899999999888776665 466888999998 9999999999999765 3332
Q ss_pred eeEEEeecccceeEEEECC--CCCEEEEEECCCCcceEEEEEcCCCCeeEEEe-cCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 92 LKKEFRVLSGRIDDLQWSP--DGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD-GHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 92 ~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
+......|.++|.+++|+| +++++++++.+. .+++|+.+.+....... .|...|.+++|+|++. .+++|+.|+
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg---~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg 192 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRG---TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDG 192 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTC---CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTS
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC---cEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCC
Confidence 3332335567899999999 999999888544 47888888887766554 4556899999999987 499999999
Q ss_pred eEEEEeCCCCcee-eeccC-cccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceE--EEEECCC
Q 007283 169 LVNFYEGPPFKFK-LSHRG-HSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVY--AVSWSPD 244 (609)
Q Consensus 169 ~i~~~~~~~~~~~-~~~~~-h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~--~l~~spd 244 (609)
.|++||...++.. ..+.+ |...|++++|+|+|.+|++++++ .+++||.++++.+..+.....|...+. +++|+|+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 193 ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccceEEEECCC
Confidence 9999999888776 67777 99999999999999999999955 999999998877655543223444444 6999999
Q ss_pred CCeEEEEeC-CCcEEEeeccc
Q 007283 245 GKQVLTASA-DKSAKVWDISE 264 (609)
Q Consensus 245 ~~~l~s~s~-d~~i~iwd~~~ 264 (609)
+++|++++. |+.+++|++..
T Consensus 272 g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 272 GKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEecCCCCcEEEEEEcc
Confidence 999999998 99999999853
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=3e-26 Score=217.55 Aligned_cols=225 Identities=9% Similarity=-0.005 Sum_probs=167.5
Q ss_pred eEEEeCCCEEEEEeCCCC---ccccccccCCC-------------------------CcEEEEECCC----CCEEEEEeC
Q 007283 30 SILYTNGRSVIILDLSNP---LQVSIYGEHAY-------------------------PATVARFSPN----GEWIASADV 77 (609)
Q Consensus 30 ~l~~~~~~~~~i~~~~~~---~~~~~~~~h~~-------------------------~v~~~~~sp~----g~~las~~~ 77 (609)
.|+...-..|.+|+..+. +..+.+.+|+. .|+.++|+|| ++++++++.
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN 135 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC
Confidence 344445568888988887 34444555554 4667777888 888887553
Q ss_pred --------------------CCcEEEEcCCCCceeeEEEeecccceeEEEECC---CCCEEEEEECCCCcceEEEEEcCC
Q 007283 78 --------------------SGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSP---DGLRIVACGDGKGKSLVRAFMWDS 134 (609)
Q Consensus 78 --------------------d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~sp---dg~~l~~~~~~~~~~~~~~~~~~~ 134 (609)
|++|++|++.+.......+..|...+..++|+| |+..|++.+.++ .+++|++++
T Consensus 136 ~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~---TIkIWDl~T 212 (356)
T 2w18_A 136 IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMN---NIVIWNLKT 212 (356)
T ss_dssp EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTS---EEEEEETTT
T ss_pred eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCC---cEEEEECCC
Confidence 888999998543334456678888888899998 678899888654 689999999
Q ss_pred CCeeEEEecCC---ccEEEEEEeeCCCeE-----------EEEecCCCeEEEEeCCCCceeeec-----cCcccceEEEE
Q 007283 135 GTNVGEFDGHS---RRVLSCAFKPSRPFR-----------IATCGEDFLVNFYEGPPFKFKLSH-----RGHSNFVNCVR 195 (609)
Q Consensus 135 ~~~~~~~~~h~---~~v~~~~~~p~~~~~-----------i~t~~~d~~i~~~~~~~~~~~~~~-----~~h~~~v~~l~ 195 (609)
++++.++.+|. ..+.+++|+|++... +++|+.|+++++|+..+++....+ .+|...+.+..
T Consensus 213 Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~ 292 (356)
T 2w18_A 213 GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD 292 (356)
T ss_dssp CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE
T ss_pred CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc
Confidence 99999998754 357788999998753 367889999999999888765543 47766655444
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceE-EEEECCCCCeEEEEeCCCcEEEeec
Q 007283 196 FSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVY-AVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 196 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~-~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
++ +..+|+++.|++|+|||..+++.+.++. +|...+. +++|+|||++|++|+.|++||+||+
T Consensus 293 ~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~---gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 293 VK--DHCAAAILTSGTIAIWDLLLGQCTALLP---PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EE--TTEEEEEETTSCEEEEETTTCSEEEEEC---CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cC--CCEEEEEcCCCcEEEEECCCCcEEEEec---CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 43 7789999999999999999999988874 6777655 5899999999999999999999985
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=3e-24 Score=224.89 Aligned_cols=326 Identities=13% Similarity=0.140 Sum_probs=231.1
Q ss_pred EECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEc--CCCCeeEEE
Q 007283 64 RFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMW--DSGTNVGEF 141 (609)
Q Consensus 64 ~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~ 141 (609)
+|+|+++++++++.|++|.+||..+++++. .+..... +..++|||||++|++++.+ ..+++|+. .+.+.+..+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~-~i~~g~~-~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVK-VIDTGYA-VHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEE-EEECSTT-EEEEEECTTSCEEEEEETT---SEEEEEETTSSSCEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEE-EEecCcc-cceEEECCCCCEEEEECCC---CeEEEEECcCCCCcEEEEE
Confidence 489999999999999999999999887543 4543222 8899999999999998865 35777887 566667777
Q ss_pred ecCCccEEEEEEee----CCCeEEEEecCCCeEEEEeCCCCceeeeccC----------cc-cceEEEEEcCCCC-EEEE
Q 007283 142 DGHSRRVLSCAFKP----SRPFRIATCGEDFLVNFYEGPPFKFKLSHRG----------HS-NFVNCVRFSPDGS-KFIS 205 (609)
Q Consensus 142 ~~h~~~v~~~~~~p----~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~----------h~-~~v~~l~~s~dg~-~l~s 205 (609)
.. ...+..++|+| ++..+++++..++.+.+||..+++....+.. |. ..+..+.++|++. ++++
T Consensus 219 ~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 219 KI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp EC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 64 45679999999 9987555545689999999988877665543 22 3688999999876 5566
Q ss_pred EeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEe-CCCcEEEeecccCCCCceEEEeccCCCCCccc
Q 007283 206 VSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTAS-ADKSAKVWDISEDNHGKLKKTLTPSGSGGVDD 284 (609)
Q Consensus 206 ~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 284 (609)
...++.|.+||..+.+.+.... . .+...+..+.|+|+|++|++++ .+++|.+||+.. +++...+....
T Consensus 298 ~~~~g~i~vvd~~~~~~l~~~~-i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t---g~l~~~i~~g~------ 366 (543)
T 1nir_A 298 VKETGKVLLVNYKDIDNLTVTS-I-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD---RRLSALVDVGK------ 366 (543)
T ss_dssp ETTTTEEEEEECTTSSSCEEEE-E-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSS------
T ss_pred ECCCCeEEEEEecCCCcceeEE-e-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC---CeEEEeeccCC------
Confidence 7788999999988766443111 0 2445678899999999876554 589999999862 33322221000
Q ss_pred eEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc
Q 007283 285 MLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR 364 (609)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~ 364 (609)
..|......
T Consensus 367 ------------------------------------~ph~g~g~~----------------------------------- 375 (543)
T 1nir_A 367 ------------------------------------TPHPGRGAN----------------------------------- 375 (543)
T ss_dssp ------------------------------------SBCCTTCEE-----------------------------------
T ss_pred ------------------------------------CCCCCCCcc-----------------------------------
Confidence 001111000
Q ss_pred ccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEe
Q 007283 365 KENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTI 444 (609)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (609)
T Consensus 376 -------------------------------------------------------------------------------- 375 (543)
T 1nir_A 376 -------------------------------------------------------------------------------- 375 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCceeEEEEcCC-CCEEEEEe-CCCcEEEEEecCC-----eeeeeEEEecCCCceEEEEECCCCCEEEEEe-------
Q 007283 445 NLRFPVTASAIAPD-GSEAIIGS-QDGKLRVYSIRGD-----TLTEEAVLEKHRGAVSVIRYSPDVSMFASGD------- 510 (609)
Q Consensus 445 ~~~~~~~~~~~sp~-g~~l~~gs-~dg~i~iw~~~~~-----~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s------- 510 (609)
.++|+ |..++++. .|++|.+|++.+. ......++..|.+.+..|+|+||+++|.+++
T Consensus 376 ---------~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~ 446 (543)
T 1nir_A 376 ---------FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDAR 446 (543)
T ss_dssp ---------EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHH
T ss_pred ---------cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcc
Confidence 01343 33444443 4667777776551 0223466778888889999999999999987
Q ss_pred CCCeEEEEEccCCceEEeee--------cCCCCceEEEEECCCCcEEEEE-----eCCCeEEEEEcCCC
Q 007283 511 VNREAIVWDRVSREVKLKNM--------LYHTARINCLAWSPNNSMVATG-----SLDTCVIIYEIDKP 566 (609)
Q Consensus 511 ~d~~v~iwd~~~~~~~~~~~--------~~h~~~i~~l~~s~d~~~l~s~-----s~D~~v~vw~~~~~ 566 (609)
.+++|.+||+.+.+...+.+ ..+...+..++|+|||++|+.+ +.|++|.|||..+.
T Consensus 447 ~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 447 ISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp HHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred cCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 37899999998776542322 3567889999999999998866 25899999998764
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=2.2e-23 Score=218.41 Aligned_cols=329 Identities=12% Similarity=0.114 Sum_probs=234.0
Q ss_pred EEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc-CcccceEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCccccccCc
Q 007283 152 AFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR-GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDG--KTADKIGELSP 228 (609)
Q Consensus 152 ~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~--~~~~~~~~~~~ 228 (609)
+|+|++. .+++++.|+.+.+||..+++....+. ++. +..++|+|||++|++++.|++|.+||. .+++.+..+.
T Consensus 144 ~~~p~~~-~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 144 DLDLPNL-FSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CCCGGGE-EEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred ccCCCCE-EEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence 3778774 68889999999999999998887776 444 889999999999999999999999999 7777776663
Q ss_pred CCCCccceEEEEECC----CCCeEEEEeC-CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCC
Q 007283 229 EDGHKGSVYAVSWSP----DGKQVLTASA-DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGG 303 (609)
Q Consensus 229 ~~~h~~~V~~l~~sp----d~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 303 (609)
+...+.+++|+| ||+++++++. +++|.+||.. .++.++.+...+. .
T Consensus 220 ---~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~---t~~~~~~i~~~g~----------------------~- 270 (543)
T 1nir_A 220 ---IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE---TLEPKQIVSTRGM----------------------T- 270 (543)
T ss_dssp ---CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT---TCCEEEEEECCEE----------------------C-
T ss_pred ---cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc---ccccceeecccCc----------------------c-
Confidence 344689999999 9999999884 8999999975 3444444321100 0
Q ss_pred cEEEEeCCCCCCCceeeeCCC-CCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEE
Q 007283 304 TISIFSANDLEKSPLQLSGHM-KNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVT 382 (609)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (609)
.. ....|. ..+..+.+++..+.++++...+++|.+|+........
T Consensus 271 ------~~-------~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~--------------------- 316 (543)
T 1nir_A 271 ------VD-------TQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT--------------------- 316 (543)
T ss_dssp ------SS-------SCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE---------------------
T ss_pred ------cC-------ccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce---------------------
Confidence 00 000122 2566777776566788888899999999754321000
Q ss_pred EeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEE
Q 007283 383 SGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEA 462 (609)
Q Consensus 383 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l 462 (609)
+ ..+.....+..++|+|+|+++
T Consensus 317 ------~----------------------------------------------------~~i~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 317 ------V----------------------------------------------------TSIGAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp ------E----------------------------------------------------EEEECCSSCCCEEECTTSCEE
T ss_pred ------e----------------------------------------------------EEeccCcCccCceECCCCCEE
Confidence 0 000001124567899999987
Q ss_pred EEE-eCCCcEEEEEecCCeeeeeEEEe----cCCCceEEEEECCC-CCEEEEEe-CCCeEEEEEccCC------ceEEee
Q 007283 463 IIG-SQDGKLRVYSIRGDTLTEEAVLE----KHRGAVSVIRYSPD-VSMFASGD-VNREAIVWDRVSR------EVKLKN 529 (609)
Q Consensus 463 ~~g-s~dg~i~iw~~~~~~~~~~~~~~----~h~~~i~~v~~s~~-~~~l~s~s-~d~~v~iwd~~~~------~~~~~~ 529 (609)
+++ ..+++|.+||..++.+.. .+. .|.+....+ ++|+ +.+++++. .|++|.+||..+. -..++.
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~--~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSA--LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEE--EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEecCCCeEEEEECCCCeEEE--eeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 655 468999999999887643 333 266554444 4677 77778776 6899999998761 123456
Q ss_pred ecCCCCceEEEEECCCCcEEEEEe-------CCCeEEEEEcCCCCCcceeE-------eccccCCeEEEEEc-CCCeEEE
Q 007283 530 MLYHTARINCLAWSPNNSMVATGS-------LDTCVIIYEIDKPASSRMTI-------KGAHLGGVYGLAFT-DEHSVVS 594 (609)
Q Consensus 530 ~~~h~~~i~~l~~s~d~~~l~s~s-------~D~~v~vw~~~~~~~~~~~~-------~~~h~~~v~~~~~s-~~~~l~s 594 (609)
+..|...+..++||||+++|++++ .+++|.|||+.+.......+ +..|..++..+.|+ +++.+..
T Consensus 416 l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~ 495 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWF 495 (543)
T ss_dssp EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEE
T ss_pred EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEE
Confidence 777888889999999999999987 37899999998654221122 23567889999999 7776653
Q ss_pred E-----eCCCcEEEEEccC
Q 007283 595 S-----GEDACVRVWRLTP 608 (609)
Q Consensus 595 ~-----s~D~~i~~W~~~~ 608 (609)
+ +.|+.|.+||..+
T Consensus 496 s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 496 SVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EEECCTTSCCEEEEEETTT
T ss_pred EeecCCCCCCeEEEEECCC
Confidence 3 2589999999753
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=4.5e-24 Score=216.93 Aligned_cols=304 Identities=15% Similarity=0.144 Sum_probs=221.9
Q ss_pred CCcEEEEECCCCC-EEEEEe----CCC----cEEEEcC--CCCcee-eEEEeecccceeEEEECC--------------C
Q 007283 58 YPATVARFSPNGE-WIASAD----VSG----TVRIWGA--HNDHVL-KKEFRVLSGRIDDLQWSP--------------D 111 (609)
Q Consensus 58 ~~v~~~~~sp~g~-~las~~----~d~----~i~vWd~--~~~~~~-~~~~~~~~~~v~~~~~sp--------------d 111 (609)
..+...+|++.|. ++++|+ .|| +|+|||+ .+++.+ ...+..|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4577778888874 666776 467 8999999 877644 356788888888877775 2
Q ss_pred CCEEEEEECCCCc---ceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCC---eEEEEeCCCCceeeecc
Q 007283 112 GLRIVACGDGKGK---SLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDF---LVNFYEGPPFKFKLSHR 185 (609)
Q Consensus 112 g~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~---~i~~~~~~~~~~~~~~~ 185 (609)
+.+++.++.+.+. ..+++|+.+ +.....+.+|...|.+++|+|++.. ++.++.++ .+.+||..+++.. .+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~-la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSK-LAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCE-EEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 6677776654222 456666665 4456778889999999999999985 77777664 8999999887764 456
Q ss_pred CcccceEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeC-CC--cEEE
Q 007283 186 GHSNFVNCVRFSPDGSKFI-SVSSDKK--GIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASA-DK--SAKV 259 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~-s~~~d~~--i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~-d~--~i~i 259 (609)
+|...+.+++|+|||+.|+ +++.++. |.+||..+++.. .+ ..|...+.+++|+|||++|+.++. ++ .|++
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l---~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QV---TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EC---CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eC---cCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 6778899999999999888 5666654 899999887653 33 357788999999999999988876 44 3444
Q ss_pred eecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCE
Q 007283 260 WDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKV 339 (609)
Q Consensus 260 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 339 (609)
||+.. ++. ..+..|
T Consensus 296 ~d~~~---~~~-----------------------------------------------~~l~~~---------------- 309 (415)
T 2hqs_A 296 VNING---GAP-----------------------------------------------QRITWE---------------- 309 (415)
T ss_dssp EETTS---SCC-----------------------------------------------EECCCS----------------
T ss_pred EECCC---CCE-----------------------------------------------EEEecC----------------
Confidence 45431 000 000000
Q ss_pred EEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeecc
Q 007283 340 ILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH 419 (609)
Q Consensus 340 ~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (609)
T Consensus 310 -------------------------------------------------------------------------------- 309 (415)
T 2hqs_A 310 -------------------------------------------------------------------------------- 309 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCC---CcEEEEEecCCeeeeeEEEecCCCceEE
Q 007283 420 YPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQD---GKLRVYSIRGDTLTEEAVLEKHRGAVSV 496 (609)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~d---g~i~iw~~~~~~~~~~~~~~~h~~~i~~ 496 (609)
...+..++++|||++++.++.+ ..|++|++.++.. ..+..|. .+.+
T Consensus 310 ---------------------------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~ 358 (415)
T 2hqs_A 310 ---------------------------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDET 358 (415)
T ss_dssp ---------------------------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEE
T ss_pred ---------------------------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE---EEecCCC-CcCC
Confidence 0013445789999999888765 5899999987654 2344554 8999
Q ss_pred EEECCCCCEEEEEeCCC---eEEEEEccCCceEEeeecCCCCceEEEEECCCCc
Q 007283 497 IRYSPDVSMFASGDVNR---EAIVWDRVSREVKLKNMLYHTARINCLAWSPNNS 547 (609)
Q Consensus 497 v~~s~~~~~l~s~s~d~---~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~ 547 (609)
++|+|||+++++++.++ .+++||+.++.. ..+..|...|.+++|||...
T Consensus 359 ~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~--~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 359 PSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK--ARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTSCCE--EECCCSSSEEEEEEECCCCC
T ss_pred eEEcCCCCEEEEEEcCCCccEEEEEECCCCcE--EEeeCCCCCCcCCccccccc
Confidence 99999999999998877 899999875543 34678999999999999643
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.1e-23 Score=231.68 Aligned_cols=328 Identities=11% Similarity=0.095 Sum_probs=224.8
Q ss_pred CCCcEEEEECCCCCEEEEEeC-CC-----cEEEEcCCCCceeeEEEeecc------------------------cceeEE
Q 007283 57 AYPATVARFSPNGEWIASADV-SG-----TVRIWGAHNDHVLKKEFRVLS------------------------GRIDDL 106 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~-d~-----~i~vWd~~~~~~~~~~~~~~~------------------------~~v~~~ 106 (609)
...+..++|||||++||+++. |+ +|++||+.+++.. ..+..+. ..+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR-LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE-EEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee-EccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 346999999999999999988 88 8999999887632 2233222 237899
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCC--eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeec
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGT--NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSH 184 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~ 184 (609)
+|||||++|++++. ..+.+|+.+.+. ....+..|...+..++|+|++.. |+.++ ++.+.+|+...++.....
T Consensus 115 ~~SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp EECTTSSEEEEEET----TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTTEEEECC
T ss_pred EECCCCCEEEEEeC----CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCCCEEEec
Confidence 99999999999886 235555555552 44556778888999999999985 66555 458999998877665544
Q ss_pred cCcccc----------------eEEEEEcCCCCEEEEEeCCC---------------------------------cEEEE
Q 007283 185 RGHSNF----------------VNCVRFSPDGSKFISVSSDK---------------------------------KGIIY 215 (609)
Q Consensus 185 ~~h~~~----------------v~~l~~s~dg~~l~s~~~d~---------------------------------~i~iw 215 (609)
..+... +..++|+|||++|++++.|+ .+.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 444332 47799999999999988765 78889
Q ss_pred eCCC-CccccccCcCCCCccceEEEEECCCCCeEEEEeC-----CCcEEEeecccCCCCceEEEeccCCCCCccceEEEE
Q 007283 216 DGKT-ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASA-----DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 216 d~~~-~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
|..+ ++..... ....|...+.+++| |||++|+.++. +..|++||+.. ++...
T Consensus 269 d~~~~~~~~~~~-~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~~~----------------- 326 (741)
T 2ecf_A 269 SPAEQAQTQWID-LGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQRV----------------- 326 (741)
T ss_dssp CSSTTCCCEEEC-CCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCEEE-----------------
T ss_pred ECCCCCceEEec-CCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---CceEE-----------------
Confidence 9887 6643322 11247788999999 99999987764 34455555431 10000
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQ 369 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~ 369 (609)
+.....++ |
T Consensus 327 --------------------------------------------------~~~~~~~~----~----------------- 335 (741)
T 2ecf_A 327 --------------------------------------------------LAHETSPT----W----------------- 335 (741)
T ss_dssp --------------------------------------------------EEEEECSS----C-----------------
T ss_pred --------------------------------------------------EEEcCCCC----c-----------------
Confidence 00000000 0
Q ss_pred eeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCc
Q 007283 370 IKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFP 449 (609)
Q Consensus 370 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (609)
+ ..
T Consensus 336 ~-----------------------------------------------------------------------------~~ 338 (741)
T 2ecf_A 336 V-----------------------------------------------------------------------------PL 338 (741)
T ss_dssp C-----------------------------------------------------------------------------CC
T ss_pred C-----------------------------------------------------------------------------Cc
Confidence 0 01
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEE-EECCCCCEEE-EEeCCC--eEEEEEccCCce
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVI-RYSPDVSMFA-SGDVNR--EAIVWDRVSREV 525 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v-~~s~~~~~l~-s~s~d~--~v~iwd~~~~~~ 525 (609)
+..++++|||+++++++.||.++||.++.... ...+..|...|..+ .|+|||+.++ +++.++ ++++|++.....
T Consensus 339 ~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG 416 (741)
T ss_dssp CSCCEECTTSCEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC
T ss_pred CCceEECCCCeEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC
Confidence 23456899999999999999888988763221 34566778888887 5999998775 445555 899998754222
Q ss_pred EEeeecCCCCceEEEEECCCCcEEEEEeCC----CeEEEEEcC
Q 007283 526 KLKNMLYHTARINCLAWSPNNSMVATGSLD----TCVIIYEID 564 (609)
Q Consensus 526 ~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D----~~v~vw~~~ 564 (609)
....+. ....+.+++||||+++|+....+ ..+.+|+..
T Consensus 417 ~~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 417 QPQRLS-KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp CCEECC-CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred Ceeecc-cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 222233 36678899999999988765443 467888764
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.5e-23 Score=213.15 Aligned_cols=299 Identities=14% Similarity=0.078 Sum_probs=212.5
Q ss_pred cEEEEEEeeCCCeEEEEec----CCC----eEEEEeC--CCCcee--eeccCcccceEEEEEcC--------------CC
Q 007283 147 RVLSCAFKPSRPFRIATCG----EDF----LVNFYEG--PPFKFK--LSHRGHSNFVNCVRFSP--------------DG 200 (609)
Q Consensus 147 ~v~~~~~~p~~~~~i~t~~----~d~----~i~~~~~--~~~~~~--~~~~~h~~~v~~l~~s~--------------dg 200 (609)
.+...+|.+.+...+++|+ .|+ .+++||. .+++.. ..+.+|...+..+++++ .+
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 4555566777766676765 456 8999999 887765 45788888777777764 25
Q ss_pred CEEEEEeCC------CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCC---cEEEeecccCCCCceE
Q 007283 201 SKFISVSSD------KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADK---SAKVWDISEDNHGKLK 271 (609)
Q Consensus 201 ~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~---~i~iwd~~~~~~~~~~ 271 (609)
..++.++.+ +.+++||...+. ...+ .+|...|.+++|+|||++|++++.|+ .|++||+.. ++..
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l---~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~ 216 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGYN-QFVV---HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVR 216 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCS-CEEE---EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEE
T ss_pred CEEEEEEecCCCCccceEEEEcCCCCC-CEEE---eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEE
Confidence 677777654 799999987533 3333 36888999999999999999999875 899999863 2111
Q ss_pred EEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCc--E
Q 007283 272 KTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGL--I 349 (609)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~--i 349 (609)
.+..|...+.+++|++....++++++.|+. |
T Consensus 217 -----------------------------------------------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 217 -----------------------------------------------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp -----------------------------------------------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -----------------------------------------------EeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 122345567778887543334447777665 6
Q ss_pred EEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEec
Q 007283 350 VKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTD 429 (609)
Q Consensus 350 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (609)
.+|+...+....
T Consensus 250 ~~~d~~~~~~~~-------------------------------------------------------------------- 261 (415)
T 2hqs_A 250 YVMDLASGQIRQ-------------------------------------------------------------------- 261 (415)
T ss_dssp EEEETTTCCEEE--------------------------------------------------------------------
T ss_pred EEEECCCCCEEe--------------------------------------------------------------------
Confidence 666543211000
Q ss_pred ccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeC-CC--cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEE
Q 007283 430 SGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQ-DG--KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMF 506 (609)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~-dg--~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l 506 (609)
...+...+.+++++|||++++.++. ++ .|++|++.++.. ..+..|...+.+++|||||+++
T Consensus 262 -------------l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 262 -------------VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWEGSQNQDADVSSDGKFM 325 (415)
T ss_dssp -------------CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---EECCCSSSEEEEEEECTTSSEE
T ss_pred -------------CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---EEEecCCCcccCeEECCCCCEE
Confidence 0001123677899999999998886 45 567777766543 3345677789999999999999
Q ss_pred EEEeCC---CeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCC---eEEEEEcCCCCCcceeEeccccCC
Q 007283 507 ASGDVN---REAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDT---CVIIYEIDKPASSRMTIKGAHLGG 580 (609)
Q Consensus 507 ~s~s~d---~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~---~v~vw~~~~~~~~~~~~~~~h~~~ 580 (609)
++++.+ ..+++||+.+++.. .+..|. .+.+++|+|||++|++++.|+ .|.+||++.. ....+.+|.+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~--~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~---~~~~l~~~~~~ 399 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQ--VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR---FKARLPATDGQ 399 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEE--ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC---CEEECCCSSSE
T ss_pred EEEECcCCceEEEEEECCCCCEE--EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC---cEEEeeCCCCC
Confidence 988875 68999999876652 344454 899999999999999988887 7999998632 24455679999
Q ss_pred eEEEEEcCC
Q 007283 581 VYGLAFTDE 589 (609)
Q Consensus 581 v~~~~~s~~ 589 (609)
|.+++|++.
T Consensus 400 v~~~~~~~~ 408 (415)
T 2hqs_A 400 VKFPAWSPY 408 (415)
T ss_dssp EEEEEECCC
T ss_pred CcCCccccc
Confidence 999999965
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=3.9e-23 Score=226.59 Aligned_cols=358 Identities=11% Similarity=0.039 Sum_probs=217.9
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeeccc---ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSG---RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG 135 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 135 (609)
.+..++|+|||+++++ +.||+|++||..+++.. ..+..+.. .|..++|||||++|++..++... |
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~-------~--- 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-VLIEGKKIESLRAIRYEISPDREYALFSYNVEPI-------Y--- 85 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCC-------S---
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-EEeccccccccccceEEECCCCCEEEEEecCccc-------e---
Confidence 4678899999998877 68999999999887642 33444433 48999999999999887643311 0
Q ss_pred CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee--eeccCcccceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 136 TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK--LSHRGHSNFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~--~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
..+.++.+.+||..+++.. ....+|...+.+++|||||+.||+++. +.++
T Consensus 86 ---------------------------~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 86 ---------------------------QHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp ---------------------------SSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred ---------------------------eecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 0123455777877665542 122345556888999999999999886 7899
Q ss_pred EEeCCCCccccccCcCCCCcc------------------ceEEEEECCCCCeEEEEeCC-CcEEEeecccCCCCceEEEe
Q 007283 214 IYDGKTADKIGELSPEDGHKG------------------SVYAVSWSPDGKQVLTASAD-KSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 214 iwd~~~~~~~~~~~~~~~h~~------------------~V~~l~~spd~~~l~s~s~d-~~i~iwd~~~~~~~~~~~~~ 274 (609)
+||..+++...... .+.. .+.+++|||||++|++++.| +.+++|++.....
T Consensus 138 ~~~~~~g~~~~~~~---~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~------- 207 (723)
T 1xfd_A 138 YCAHVGKQAIRVVS---TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG------- 207 (723)
T ss_dssp EESSSSSCCEEEEC---CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS-------
T ss_pred EEECCCCceEEEec---CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC-------
Confidence 99998876543321 2222 23789999999999998765 4566666431000
Q ss_pred ccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEec
Q 007283 275 TPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~ 354 (609)
.+...+..+.+... +.. ..+..|.+|+.
T Consensus 208 -----------------------------------------------~~~~~~~~~~~~~~-G~~----~~~~~l~~~d~ 235 (723)
T 1xfd_A 208 -----------------------------------------------SIYPTVKPYHYPKA-GSE----NPSISLHVIGL 235 (723)
T ss_dssp -----------------------------------------------SSSCCCEEEECCBT-TSC----CCEEEEEEEES
T ss_pred -----------------------------------------------cCCCcceeccCCCC-CCC----CCeeEEEEEEC
Confidence 00011222222211 110 12335666654
Q ss_pred CccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEE
Q 007283 355 GIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVL 434 (609)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (609)
..+...... . ..
T Consensus 236 ~~~~~~~~l-------------------------------~----------------------~~--------------- 247 (723)
T 1xfd_A 236 NGPTHDLEM-------------------------------M----------------------PP--------------- 247 (723)
T ss_dssp SSSCCCEEC-------------------------------C----------------------CC---------------
T ss_pred CCCceeEEe-------------------------------e----------------------CC---------------
Confidence 322100000 0 00
Q ss_pred eeCCeeeEEeccCCceeEEEEcCCCCEEEEEeC----CCcEEEEEecCCeeeeeEEE-ecCCCceE----EEEECCCCCE
Q 007283 435 LRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQ----DGKLRVYSIRGDTLTEEAVL-EKHRGAVS----VIRYSPDVSM 505 (609)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~----dg~i~iw~~~~~~~~~~~~~-~~h~~~i~----~v~~s~~~~~ 505 (609)
. ........+..++++|||+++++.+. +..|++||+.++... ..+ ..+.+.+. .++|||||+.
T Consensus 248 ----~--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 248 ----D--DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT--KKHEDESEAWLHRQNEEPVFSKDGRK 319 (723)
T ss_dssp ----C--CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE--EEEEEECSSCCCCCCCCCEECTTSCS
T ss_pred ----c--cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce--EEEEeccCCEEeccCCCceEcCCCCe
Confidence 0 00000123677899999998877653 357999999877643 222 23444443 7899999997
Q ss_pred EEE--EeCCC------eEEEEE-ccCCce-EEeeecCCCCceEE-EEECCCCcEEEEEeCC---CeEEEEEcCCCCCcce
Q 007283 506 FAS--GDVNR------EAIVWD-RVSREV-KLKNMLYHTARINC-LAWSPNNSMVATGSLD---TCVIIYEIDKPASSRM 571 (609)
Q Consensus 506 l~s--~s~d~------~v~iwd-~~~~~~-~~~~~~~h~~~i~~-l~~s~d~~~l~s~s~D---~~v~vw~~~~~~~~~~ 571 (609)
++. +..++ .+++|| ..++.. ....+..+...+.. ++|||||++|+..+.+ +.+.+|+++..+....
T Consensus 320 l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 399 (723)
T 1xfd_A 320 FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNR 399 (723)
T ss_dssp EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCC
T ss_pred EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCc
Confidence 774 45676 567777 333320 01223333444554 6999999998766555 8899999875331111
Q ss_pred eEecc---ccCCeEEEEEc-CCCeEEE
Q 007283 572 TIKGA---HLGGVYGLAFT-DEHSVVS 594 (609)
Q Consensus 572 ~~~~~---h~~~v~~~~~s-~~~~l~s 594 (609)
..+.. |...+..++|| |++.|+.
T Consensus 400 ~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 400 QCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp BCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred ceecccccCCCCeEEEEECCCCCEEEE
Confidence 11222 67789999999 6676553
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.2e-21 Score=214.03 Aligned_cols=328 Identities=14% Similarity=0.155 Sum_probs=207.3
Q ss_pred CCeEEEeCCCEEEEEeCCCCccc-cccccCC-----------------CCcEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 007283 28 SNSILYTNGRSVIILDLSNPLQV-SIYGEHA-----------------YPATVARFSPNGEWIASADVSGTVRIWGAHND 89 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~-~~~~~h~-----------------~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~ 89 (609)
|+.+++..+..| +||+.+++.. ..+..|. ..|.+++|||| ++++.+ .|++|++||+.++
T Consensus 35 g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~ 111 (706)
T 2z3z_A 35 GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLAR 111 (706)
T ss_dssp TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTTT
T ss_pred CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCCC
Confidence 567777765558 9999888772 2333332 46999999999 555544 3599999999876
Q ss_pred ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC-----CCeeEEEecCCccEEEEEEeeCCCeEEEEe
Q 007283 90 HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS-----GTNVGEFDGHSRRVLSCAFKPSRPFRIATC 164 (609)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~ 164 (609)
+. ..+..+...+..++|||||++|+.+.++ .+.+|+.+. +........+.. . +.
T Consensus 112 ~~--~~l~~~~~~~~~~~~SpdG~~la~~~~~----~i~v~~~~~~~~~~g~~~~~~~~~~~-----------~--~~-- 170 (706)
T 2z3z_A 112 KV--TYLFDTNEETASLDFSPVGDRVAYVRNH----NLYIARGGKLGEGMSRAIAVTIDGTE-----------T--LV-- 170 (706)
T ss_dssp EE--EEEECCTTCCTTCEECTTSSEEEEEETT----EEEEEECBCTTSCCCCCEESCSCCBT-----------T--EE--
T ss_pred ce--EEccCCcccccCCcCCCCCCEEEEEECC----eEEEEecCcccccCCCcEEeccCCCC-----------C--eE--
Confidence 53 2344566778999999999999987542 244444333 222111100000 0 00
Q ss_pred cCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe---------------------------------CCCc
Q 007283 165 GEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS---------------------------------SDKK 211 (609)
Q Consensus 165 ~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~---------------------------------~d~~ 211 (609)
...+ ....+...+.++.|+|||++|++++ .+..
T Consensus 171 ---------~g~~-----~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 171 ---------YGQA-----VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp ---------ESSC-----CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred ---------cccc-----hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 1000 1122334567899999999999987 4467
Q ss_pred EEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCC-----cEEEeecccCCCCceEEEeccCCCCCccceE
Q 007283 212 GIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADK-----SAKVWDISEDNHGKLKKTLTPSGSGGVDDML 286 (609)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (609)
+.+||..+++..... ....|...+.+++|+|||++|++++.++ .|++||+.. ++....
T Consensus 237 l~~~d~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~~------------- 299 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQ-TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVRT------------- 299 (706)
T ss_dssp EEEEETTTTEEEECC-CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEEE-------------
T ss_pred EEEEECCCCceEeec-cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---CceeeE-------------
Confidence 999999887754322 1224677899999999999999887665 666666541 100000
Q ss_pred EEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccc
Q 007283 287 VGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKE 366 (609)
Q Consensus 287 ~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~ 366 (609)
+....... |
T Consensus 300 -----------------------------------------------------~~~~~~~~----~-------------- 308 (706)
T 2z3z_A 300 -----------------------------------------------------LFVETDKH----Y-------------- 308 (706)
T ss_dssp -----------------------------------------------------EEEEECSS----C--------------
T ss_pred -----------------------------------------------------EEEccCCC----e--------------
Confidence 00000000 0
Q ss_pred ccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEecc
Q 007283 367 NSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINL 446 (609)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (609)
T Consensus 309 -------------------------------------------------------------------------------- 308 (706)
T 2z3z_A 309 -------------------------------------------------------------------------------- 308 (706)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceeEEEEcC--CCCEEEEEeCCCcEEEEEec-CCeeeeeEEEecCCCceEE-EEECCCCCEEEEEeCC-C----eEEE
Q 007283 447 RFPVTASAIAP--DGSEAIIGSQDGKLRVYSIR-GDTLTEEAVLEKHRGAVSV-IRYSPDVSMFASGDVN-R----EAIV 517 (609)
Q Consensus 447 ~~~~~~~~~sp--~g~~l~~gs~dg~i~iw~~~-~~~~~~~~~~~~h~~~i~~-v~~s~~~~~l~s~s~d-~----~v~i 517 (609)
...+..++++| ||+++++++.|+.+++|.++ .+.. ...+..|...+.. ++|+|||+.++.++.+ + .++.
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~--~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL--IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE--EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred ECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE--EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 00123356889 99999999999999999886 3322 2445667777876 8999999887665544 3 6777
Q ss_pred EEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCC----CeEEEEEcCCC
Q 007283 518 WDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLD----TCVIIYEIDKP 566 (609)
Q Consensus 518 wd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D----~~v~vw~~~~~ 566 (609)
||..++.. + ...|...+.+++|||||++|+....+ +.|.+||+...
T Consensus 387 ~d~~~~~~--~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 387 IDIKGGKT--K-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EETTCCCC--E-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEcCCCCc--e-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 77766542 2 23477789999999999988876443 56999998753
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.5e-22 Score=222.51 Aligned_cols=234 Identities=10% Similarity=0.062 Sum_probs=173.4
Q ss_pred ceeEEeecCCCCeEEEeC--CC-----EEEEEeCCCCccccccccCCC------------------------CcEEEEEC
Q 007283 18 RGILISGHPKSNSILYTN--GR-----SVIILDLSNPLQVSIYGEHAY------------------------PATVARFS 66 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~--~~-----~~~i~~~~~~~~~~~~~~h~~------------------------~v~~~~~s 66 (609)
.+..++++|||+.|++.. ++ .+.+||+.+++....+..|.. .|..++||
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 456899999999998874 34 899999998876555554433 38899999
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCC---ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEec
Q 007283 67 PNGEWIASADVSGTVRIWGAHND---HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG 143 (609)
Q Consensus 67 p~g~~las~~~d~~i~vWd~~~~---~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (609)
|||++|++++. ++|++||+.++ +. ..+..+...+..++|||||++|+.+.++ .+.+|+.+.+........
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~--~~l~~~~~~~~~~~~SPDG~~la~~~~~----~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAV--RQLTHGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSC--CBCCCSSSCEEEEEECTTSSEEEEEETT----EEEEEETTTTEEEECCCC
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceE--EEcccCCcccccccCCCCCCEEEEEeCC----cEEEEecCCCCEEEeccC
Confidence 99999998876 99999999876 43 2355667789999999999999998764 345555555443332333
Q ss_pred CCcc----------------EEEEEEeeCCCeEEEEecCCC---------------------------------eEEEEe
Q 007283 144 HSRR----------------VLSCAFKPSRPFRIATCGEDF---------------------------------LVNFYE 174 (609)
Q Consensus 144 h~~~----------------v~~~~~~p~~~~~i~t~~~d~---------------------------------~i~~~~ 174 (609)
+... +..++|+|++.. |+.++.|. .+.+||
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 3322 467999999986 55554443 677888
Q ss_pred CCC-Cceeeecc--CcccceEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCccccccCcCCCCcc----ceEEEEEC
Q 007283 175 GPP-FKFKLSHR--GHSNFVNCVRFSPDGSKFISVSS-----DKKGIIYDGKTADKIGELSPEDGHKG----SVYAVSWS 242 (609)
Q Consensus 175 ~~~-~~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~h~~----~V~~l~~s 242 (609)
... ++...... .|...+..++| |||+.|++++. +..+.+||..+++....+. .+.. .+.+++|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAH---ETSPTWVPLHNSLRFL 345 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEE---EECSSCCCCCSCCEEC
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEE---cCCCCcCCcCCceEEC
Confidence 777 66544332 47788999999 99999887764 5679999998887654432 1221 45689999
Q ss_pred CCCCeEEEEeCCCcEEEeecc
Q 007283 243 PDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 243 pd~~~l~s~s~d~~i~iwd~~ 263 (609)
|||+++++++.|+.+++|.++
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEEC
T ss_pred CCCeEEEEecCCCccEEEEEc
Confidence 999999999999988888764
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=7.9e-22 Score=216.24 Aligned_cols=231 Identities=11% Similarity=0.074 Sum_probs=160.7
Q ss_pred CceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCC---CcEEEEECCCCCEEEEEeCC---------CcEEEE
Q 007283 17 GRGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAY---PATVARFSPNGEWIASADVS---------GTVRIW 84 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~---~v~~~~~sp~g~~las~~~d---------~~i~vW 84 (609)
..+..++++|||++++...++.+.+||+.+++....+.+|.. .|..++|||||++||+++.+ +++.+|
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 446688999999966554557999999999887777777765 49999999999999998764 678899
Q ss_pred cCCCCceeeEEEee---cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCcc--------------
Q 007283 85 GAHNDHVLKKEFRV---LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRR-------------- 147 (609)
Q Consensus 85 d~~~~~~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-------------- 147 (609)
|+.+++. ..+.. +...+..++|||||++|+.+.++ .+++|+.+.+........+...
T Consensus 97 d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~----~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 97 KIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFEN----NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp ESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEETT----EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred ECCCCce--EeccCCccccccccccEECCCCCEEEEEECC----eEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 9988764 22332 33348899999999999998863 2444444445444444443332
Q ss_pred ----EEEEEEeeCCCeEEEEecCC-CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc
Q 007283 148 ----VLSCAFKPSRPFRIATCGED-FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 148 ----v~~~~~~p~~~~~i~t~~~d-~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~ 222 (609)
+.+++|+|++.. |+.++.| ..+..|+..... ..+...+..+.|.++|.. ..+..+.+||..+++.
T Consensus 171 ~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~ 240 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYT-----GSIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTH 240 (723)
T ss_dssp TSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCS-----SSSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCC
T ss_pred eccCcceEEECCCCCE-EEEEEECCCccceEEeeccC-----CcCCCcceeccCCCCCCC----CCeeEEEEEECCCCce
Confidence 278999999986 5555433 345555533211 113345788999998863 3456899999988775
Q ss_pred ccccCcC---CCCccceEEEEECCCCCeEEEEeC----CCcEEEeecc
Q 007283 223 IGELSPE---DGHKGSVYAVSWSPDGKQVLTASA----DKSAKVWDIS 263 (609)
Q Consensus 223 ~~~~~~~---~~h~~~V~~l~~spd~~~l~s~s~----d~~i~iwd~~ 263 (609)
...+... ..+...+.+++|+|||++|++.+. +..|++||+.
T Consensus 241 ~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 241 DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 4444211 123677999999999998877653 3578889876
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3.7e-20 Score=183.28 Aligned_cols=189 Identities=11% Similarity=0.124 Sum_probs=131.7
Q ss_pred EEEEEeCCCcEEEEcCCC-CceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcC--CCC--eeEEEecCC
Q 007283 71 WIASADVSGTVRIWGAHN-DHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD--SGT--NVGEFDGHS 145 (609)
Q Consensus 71 ~las~~~d~~i~vWd~~~-~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~h~ 145 (609)
++++++.|++|++|++.. +.........+...+..++|+|||++|++++.+. ..+++|+.+ .+. .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCCceeeccccccCC
Confidence 445557899999999863 3222222234566789999999999998887643 246677776 333 233444444
Q ss_pred ccEEEEEEeeCCCeEEEEecCCCeEEEEeC---CCCceeeeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-C
Q 007283 146 RRVLSCAFKPSRPFRIATCGEDFLVNFYEG---PPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKT-A 220 (609)
Q Consensus 146 ~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~---~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~-~ 220 (609)
.+..++|+|++..+++++..++.+.+|+. ...+....+..+ ..+.+++|+|+|+.|++++ .++.+.+||..+ +
T Consensus 85 -~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 85 -SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp -CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 78899999999976677777899999997 333333444433 3588899999999888777 899999999877 4
Q ss_pred cccccc--CcCCCCccceEEEEECCCCCeEEEEe-CCCcEEEeecc
Q 007283 221 DKIGEL--SPEDGHKGSVYAVSWSPDGKQVLTAS-ADKSAKVWDIS 263 (609)
Q Consensus 221 ~~~~~~--~~~~~h~~~V~~l~~spd~~~l~s~s-~d~~i~iwd~~ 263 (609)
+..... .........+..++|+|++++++.++ .++.+++|++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 432110 00112234688999999999776554 78999999975
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=6e-20 Score=180.94 Aligned_cols=236 Identities=9% Similarity=-0.013 Sum_probs=167.1
Q ss_pred EeecCCCCeEEEe--CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe-CCCcEEEEcCCCCceeeEEEee
Q 007283 22 ISGHPKSNSILYT--NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD-VSGTVRIWGAHNDHVLKKEFRV 98 (609)
Q Consensus 22 ~~~~~~~~~l~~~--~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~-~d~~i~vWd~~~~~~~~~~~~~ 98 (609)
+.+.++++.++.. .++.+.+||+.+++....+..+..++ .++|+|+|++|+.++ .++.|.+||..+++.....+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 4455666664433 35799999999888766666666667 999999999776555 4899999999887753445556
Q ss_pred cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCe-EEEEeCCC
Q 007283 99 LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFL-VNFYEGPP 177 (609)
Q Consensus 99 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~-i~~~~~~~ 177 (609)
+..+..+++|+|||++|++...+.....+.+|+.+.++.+..+..+. ....++|+|++..+++++..++. +.+|+...
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 66666669999999999943322122256777777777766665543 46899999999876777777677 99998654
Q ss_pred Ccee----eeccCcccceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCcc---ccccCcCCCCccceEEEEECCCCCeEE
Q 007283 178 FKFK----LSHRGHSNFVNCVRFSPDGSKFISV-SSDKKGIIYDGKTADK---IGELSPEDGHKGSVYAVSWSPDGKQVL 249 (609)
Q Consensus 178 ~~~~----~~~~~h~~~v~~l~~s~dg~~l~s~-~~d~~i~iwd~~~~~~---~~~~~~~~~h~~~V~~l~~spd~~~l~ 249 (609)
.... ............++|+|||++++.+ ..++.+.+||..+++. +..+. ....+..++|+|||++++
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 161 DGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp TCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEE
T ss_pred CCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEE
Confidence 2211 1111233457899999999965554 4688999999998887 55442 235678899999999776
Q ss_pred EEe-CCCcEEEeecc
Q 007283 250 TAS-ADKSAKVWDIS 263 (609)
Q Consensus 250 s~s-~d~~i~iwd~~ 263 (609)
.++ .++.|.+||+.
T Consensus 237 v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 237 VLTESTVDVFNFNQL 251 (331)
T ss_dssp EECSSEEEEEEEETT
T ss_pred EEEcCCCEEEEEECC
Confidence 554 57889999986
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=2.1e-19 Score=177.01 Aligned_cols=283 Identities=11% Similarity=0.116 Sum_probs=186.1
Q ss_pred EEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCcc-ccccCcC
Q 007283 152 AFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSS-DKKGIIYDGKTADK-IGELSPE 229 (609)
Q Consensus 152 ~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-d~~i~iwd~~~~~~-~~~~~~~ 229 (609)
.|.+++...+++++.++.+.+||..+++.......+...+ +++|+|+|+++++++. ++.+.+||..+++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-- 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-- 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc--
Confidence 4566777778999999999999999888876666556666 9999999996666655 88999999988876 44432
Q ss_pred CCCccceEEEEECCCCCeEEEEeCCC---cEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEE
Q 007283 230 DGHKGSVYAVSWSPDGKQVLTASADK---SAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTIS 306 (609)
Q Consensus 230 ~~h~~~V~~l~~spd~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 306 (609)
.+.....+++|+|+|+++++...++ .|++||+.. ++....+.
T Consensus 81 -~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~---~~~~~~~~------------------------------- 125 (331)
T 3u4y_A 81 -EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK---NKFISTIP------------------------------- 125 (331)
T ss_dssp -ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT---TEEEEEEE-------------------------------
T ss_pred -cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC---CCeEEEEE-------------------------------
Confidence 3444444599999999999555443 899999863 22222211
Q ss_pred EEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCc-EEEEecCccccceeccccccceeEeeeeCCcEEEEec
Q 007283 307 IFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGL-IVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGF 385 (609)
Q Consensus 307 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~-i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
+......+++++....++++...++. |.+|+.+... .+ ...
T Consensus 126 ----------------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g----------~~----------~~~-- 167 (331)
T 3u4y_A 126 ----------------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG----------VL----------FDT-- 167 (331)
T ss_dssp ----------------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC----------CE----------EEE--
T ss_pred ----------------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC----------cE----------eec--
Confidence 01123466666544446667677788 9999654210 00 000
Q ss_pred cceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEE-
Q 007283 386 DNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAII- 464 (609)
Q Consensus 386 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~- 464 (609)
. ...+........++++|||+++++
T Consensus 168 -----------------------------------------------------~-~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 168 -----------------------------------------------------G-QEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp -----------------------------------------------------E-EEEECSSSSEEEEEECTTSSEEEEE
T ss_pred -----------------------------------------------------C-CccccCCCCccceEECCCCCEEEEE
Confidence 0 000011123567889999996554
Q ss_pred EeCCCcEEEEEecCCeeee-eEEEecCCCceEEEEECCCCCEEEEEe-CCCeEEEEEccCCceEE-eeecC----CCC--
Q 007283 465 GSQDGKLRVYSIRGDTLTE-EAVLEKHRGAVSVIRYSPDVSMFASGD-VNREAIVWDRVSREVKL-KNMLY----HTA-- 535 (609)
Q Consensus 465 gs~dg~i~iw~~~~~~~~~-~~~~~~h~~~i~~v~~s~~~~~l~s~s-~d~~v~iwd~~~~~~~~-~~~~~----h~~-- 535 (609)
+..++.|++|++.++.... ...+. ....+..++|+|||+++++++ .++.+.+||..+++... ..+.. +..
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPL 272 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGG
T ss_pred eCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCc
Confidence 4568999999998765411 22333 346778999999999766554 57889999988765421 11111 122
Q ss_pred -ceEEEEECCCCcEEEEEe-CCCeEEEEEcCC
Q 007283 536 -RINCLAWSPNNSMVATGS-LDTCVIIYEIDK 565 (609)
Q Consensus 536 -~i~~l~~s~d~~~l~s~s-~D~~v~vw~~~~ 565 (609)
...+++|+||+++|+.++ .+++|.+||+..
T Consensus 273 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 273 FGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp TTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred ccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 235689999999886555 567999999875
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=7.7e-21 Score=183.72 Aligned_cols=220 Identities=13% Similarity=0.074 Sum_probs=164.2
Q ss_pred CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCC-CceeeEEEeec-ccceeEEEECCCCC
Q 007283 36 GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHN-DHVLKKEFRVL-SGRIDDLQWSPDGL 113 (609)
Q Consensus 36 ~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~-~~~~~~~~~~~-~~~v~~~~~spdg~ 113 (609)
...+.+||+.+++... +..|.+.|.+++|+|||++||+++ ++.|++||+.+ ++.. .....+ ...+..++|+|||+
T Consensus 21 ~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-KVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-ECCCTTCCCBCSCCEECTTSS
T ss_pred ceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-EeccccccccccceEECCCCC
Confidence 3689999998877654 566889999999999999999986 78999999988 6532 223333 35788999999999
Q ss_pred EEEEEECCCCcceEEEEEcCCC-CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC-CceeeeccCcccce
Q 007283 114 RIVACGDGKGKSLVRAFMWDSG-TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP-FKFKLSHRGHSNFV 191 (609)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~-~~~~~~~~~h~~~v 191 (609)
+|+++....+ ...++|.++.. .....+..+. .+..++|+|++..++++++.++.+.+|+... ......+..|...+
T Consensus 98 ~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 175 (297)
T 2ojh_A 98 LYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN 175 (297)
T ss_dssp EEEEEECTTT-SSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE
T ss_pred EEEEEEeCCC-CcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc
Confidence 9999884322 23457777642 2234444443 4888999999997666888899899997432 22334556677889
Q ss_pred EEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCccccccCcCCCCccceEEEEECCCCCeEEEEeCC-----------CcEE
Q 007283 192 NCVRFSPDGSKFISVS-SDKKGIIYDGK-TADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASAD-----------KSAK 258 (609)
Q Consensus 192 ~~l~~s~dg~~l~s~~-~d~~i~iwd~~-~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d-----------~~i~ 258 (609)
.++.|+|+|+.|+.++ .++.+.+|+.. .+..+..+ ..|...+.+++|+|++++|+.++.+ +.|+
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI---TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC---CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE---ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEE
Confidence 9999999999888766 58899999865 33344444 3567789999999999999988876 4588
Q ss_pred Eeecc
Q 007283 259 VWDIS 263 (609)
Q Consensus 259 iwd~~ 263 (609)
+||+.
T Consensus 253 ~~d~~ 257 (297)
T 2ojh_A 253 LMDMD 257 (297)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 88875
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=2.5e-19 Score=177.27 Aligned_cols=280 Identities=11% Similarity=0.058 Sum_probs=176.9
Q ss_pred CeEEEEecCCCeEEEEeCC-CCce-eeeccCcccceEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCcc--ccccCcCC
Q 007283 158 PFRIATCGEDFLVNFYEGP-PFKF-KLSHRGHSNFVNCVRFSPDGSKFISVSSD-KKGIIYDGK--TADK--IGELSPED 230 (609)
Q Consensus 158 ~~~i~t~~~d~~i~~~~~~-~~~~-~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-~~i~iwd~~--~~~~--~~~~~~~~ 230 (609)
..++++++.|+.+.+|+.. .++. ......|...+.+++|+|+|++|++++.+ +.+.+|+.. +++. +..+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~--- 81 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA--- 81 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc---
Confidence 3456777889999999874 3322 12223466778999999999988888876 899999986 4442 22221
Q ss_pred CCccceEEEEECCCCCeEEEEeC-CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEe
Q 007283 231 GHKGSVYAVSWSPDGKQVLTASA-DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFS 309 (609)
Q Consensus 231 ~h~~~V~~l~~spd~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (609)
. .+.+..++|+|++++|++++. ++.|++||+......+.....
T Consensus 82 ~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------------------------- 125 (343)
T 1ri6_A 82 L-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV----------------------------------- 125 (343)
T ss_dssp C-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-----------------------------------
T ss_pred c-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-----------------------------------
Confidence 2 236889999999998876665 888999998411001111100
Q ss_pred CCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEe-cCCcEEEEecCc-cccceeccccccceeEeeeeCCcEEEEeccc
Q 007283 310 ANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSS-YDGLIVKWIQGI-GYGGKLQRKENSQIKCFAAIEEEIVTSGFDN 387 (609)
Q Consensus 310 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s-~dg~i~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 387 (609)
. ....+.++++++ +++.+++++ .|+.|.+|+... +. +.....
T Consensus 126 -----------~-~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~-----------~~~~~~------------ 169 (343)
T 1ri6_A 126 -----------E-GLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGH-----------LVAQDP------------ 169 (343)
T ss_dssp -----------C-CCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSC-----------EEEEEE------------
T ss_pred -----------c-CCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCc-----------eeeecc------------
Confidence 0 111244555654 344455554 899999997642 10 000000
Q ss_pred eEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEe-
Q 007283 388 KIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGS- 466 (609)
Q Consensus 388 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs- 466 (609)
. .+ .......+..++++|+|+++++++
T Consensus 170 ~--~~--------------------------------------------------~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 170 A--EV--------------------------------------------------TTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp E--EE--------------------------------------------------ECSTTCCEEEEEECTTSSEEEEEET
T ss_pred c--cc--------------------------------------------------ccCCCCCcceEEECCCCCEEEEEeC
Confidence 0 00 000112356788999999776554
Q ss_pred CCCcEEEEEecC--CeeeeeEEEe----cC--CCceEEEEECCCCCEEE-EEeCCCeEEEEEcc--CCce-EEeeecCCC
Q 007283 467 QDGKLRVYSIRG--DTLTEEAVLE----KH--RGAVSVIRYSPDVSMFA-SGDVNREAIVWDRV--SREV-KLKNMLYHT 534 (609)
Q Consensus 467 ~dg~i~iw~~~~--~~~~~~~~~~----~h--~~~i~~v~~s~~~~~l~-s~s~d~~v~iwd~~--~~~~-~~~~~~~h~ 534 (609)
.++.|++|++.. +.+....... ++ ...+..++|+|+|++++ ++..++.+++||+. ++.. .+..+..+.
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~ 277 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET 277 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC
Confidence 789999999953 3332122222 11 23567899999998777 55579999999987 2222 222233333
Q ss_pred CceEEEEECCCCcEEEEEe-CCCeEEEEEcCC
Q 007283 535 ARINCLAWSPNNSMVATGS-LDTCVIIYEIDK 565 (609)
Q Consensus 535 ~~i~~l~~s~d~~~l~s~s-~D~~v~vw~~~~ 565 (609)
.+.+++|+||+++|++++ .|+.|.+|+++.
T Consensus 278 -~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 278 -QPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp -SCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred -ccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 388999999999888887 689999997764
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=9.3e-21 Score=183.12 Aligned_cols=236 Identities=16% Similarity=0.098 Sum_probs=176.2
Q ss_pred cCceeEEeecCCCCeEEEeCCCEEEEEeCCC-CccccccccC-CCCcEEEEECCCCCEEEEEe--CCCcEEEEcCCCCce
Q 007283 16 RGRGILISGHPKSNSILYTNGRSVIILDLSN-PLQVSIYGEH-AYPATVARFSPNGEWIASAD--VSGTVRIWGAHNDHV 91 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~-~~~~~~~~~h-~~~v~~~~~sp~g~~las~~--~d~~i~vWd~~~~~~ 91 (609)
.+....+.++|+|+.|++...+.+.+||+.+ ++....+.+| ...+.+++|+|||++|++++ .++..+||.++....
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 4566789999999999998888999999988 7766666566 46789999999999999988 446777776643221
Q ss_pred eeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC-CCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeE
Q 007283 92 LKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS-GTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLV 170 (609)
Q Consensus 92 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i 170 (609)
....+..+ ..+..++|+|||++|+.++.... .+++|.++. ......+..|...+.+++|+|++..+++++..++.+
T Consensus 121 ~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 121 TPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQ--VFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp CCEECCSS-SSEEEEEECTTSSEEEEEEEETT--EEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred ceEEeecC-CCccceEECCCCCEEEEEECCCC--ceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence 12233333 34888999999999885543222 356777654 234456677888999999999998766666678888
Q ss_pred EEEeCC-CCceeeeccCcccceEEEEEcCCCCEEEEEeCC-----------CcEEEEeCCCCccccccCcCCCCccceEE
Q 007283 171 NFYEGP-PFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD-----------KKGIIYDGKTADKIGELSPEDGHKGSVYA 238 (609)
Q Consensus 171 ~~~~~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-----------~~i~iwd~~~~~~~~~~~~~~~h~~~V~~ 238 (609)
.+|+.. .......+..|...+.++.|+|+|++|++++.+ ..+.+||..+++..... ...+|...+.+
T Consensus 198 ~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~~~ 276 (297)
T 2ojh_A 198 QIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF-DLFGGQGTMNS 276 (297)
T ss_dssp EEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE-EEEESTTTSCS
T ss_pred cEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee-ccCCCCccccc
Confidence 898764 344455667788889999999999999888765 56999998877643222 12257778999
Q ss_pred EEECCCCCeEEEEeCCC
Q 007283 239 VSWSPDGKQVLTASADK 255 (609)
Q Consensus 239 l~~spd~~~l~s~s~d~ 255 (609)
++|+|++++|++++.+.
T Consensus 277 ~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 277 PNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCBCTTSSEEEEEEECC
T ss_pred ceECCCCCEEEEEEecc
Confidence 99999999999887664
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=3e-19 Score=195.15 Aligned_cols=363 Identities=8% Similarity=-0.008 Sum_probs=204.9
Q ss_pred EEEEeeCCCeEEEEecCCCeEEEEeCCCCcee-eeccCcc-----------------cceEEEEEcCCCCEEEEEeCCCc
Q 007283 150 SCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK-LSHRGHS-----------------NFVNCVRFSPDGSKFISVSSDKK 211 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~-~~~~~h~-----------------~~v~~l~~s~dg~~l~s~~~d~~ 211 (609)
.+.|. +. .++.++.|+ | +||..+++.. ..+..|. ..|.+++|+|| +.++.+ .++.
T Consensus 30 ~~~w~--g~-~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~ 102 (706)
T 2z3z_A 30 GLQWM--GD-NYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGG 102 (706)
T ss_dssp TCEEE--TT-EEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTE
T ss_pred CCcCc--CC-eEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCE
Confidence 35566 33 355666677 7 9998877662 2322322 46999999999 666655 4599
Q ss_pred EEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccC--CCCceEEEeccCCCCCccceEEEE
Q 007283 212 GIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISED--NHGKLKKTLTPSGSGGVDDMLVGC 289 (609)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 289 (609)
+.+||..+++..... .+.+.+.+++|||||++|+++ .|+.|++||+... ..++...... .+...
T Consensus 103 i~~~d~~~~~~~~l~----~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~-~~~~~-------- 168 (706)
T 2z3z_A 103 LVGFDMLARKVTYLF----DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTI-DGTET-------- 168 (706)
T ss_dssp EEEEETTTTEEEEEE----CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCS-CCBTT--------
T ss_pred EEEEECCCCceEEcc----CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEecc-CCCCC--------
Confidence 999999887654322 355678899999999999995 6899999998630 0022211111 00000
Q ss_pred EEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecC-CcEEEEecCccccceecccccc
Q 007283 290 LWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYD-GLIVKWIQGIGYGGKLQRKENS 368 (609)
Q Consensus 290 ~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~d-g~i~~W~~~~~~~~~~~~~~~~ 368 (609)
+ .+... ....+...+.++.|++ +++.++.++.| ..+..+....... ...
T Consensus 169 ------~----------~~g~~-------~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~------~~~ 218 (706)
T 2z3z_A 169 ------L----------VYGQA-------VHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHP------LEA 218 (706)
T ss_dssp ------E----------EESSC-------CGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCS------SSC
T ss_pred ------e----------Ecccc-------hhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCC------CCC
Confidence 0 00000 0111233455667764 45677776633 2222221100000 000
Q ss_pred ceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCC
Q 007283 369 QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRF 448 (609)
Q Consensus 369 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (609)
........... ....+..+++|++.+.... .+.. ......
T Consensus 219 ~~~~~~y~~~g--~~~~~~~l~~~d~~~~~~~---------------------------------~~~~-----~~~~~~ 258 (706)
T 2z3z_A 219 ESKPLYYPMAG--TPSHHVTVGIYHLATGKTV---------------------------------YLQT-----GEPKEK 258 (706)
T ss_dssp EEEEECCCBTT--SCCCEEEEEEEETTTTEEE---------------------------------ECCC-----CSCTTC
T ss_pred ceEEeeCCCCC--CCCCeeEEEEEECCCCceE---------------------------------eecc-----CCCCce
Confidence 00000000000 0011234555554332110 0000 001123
Q ss_pred ceeEEEEcCCCCEEEEEeCCC-----cEEEEEecCC-eeeeeEEEecCCC---ceEEEEECC--CCCEEEEEeCCCeEEE
Q 007283 449 PVTASAIAPDGSEAIIGSQDG-----KLRVYSIRGD-TLTEEAVLEKHRG---AVSVIRYSP--DVSMFASGDVNREAIV 517 (609)
Q Consensus 449 ~~~~~~~sp~g~~l~~gs~dg-----~i~iw~~~~~-~~~~~~~~~~h~~---~i~~v~~s~--~~~~l~s~s~d~~v~i 517 (609)
.+..++++|||+++++++.|+ .|++||+.++ .... .....+.. .+..+.|+| ||+++++++.|+.+++
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~-~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT-LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE-EEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE-EEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 467899999999999988776 8999999877 3321 11122222 346789999 9999999999999999
Q ss_pred EEccCCceEEeeecCCCCceEE-EEECCCCcEEEEEeCC-C----eEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCC
Q 007283 518 WDRVSREVKLKNMLYHTARINC-LAWSPNNSMVATGSLD-T----CVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEH 590 (609)
Q Consensus 518 wd~~~~~~~~~~~~~h~~~i~~-l~~s~d~~~l~s~s~D-~----~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~ 590 (609)
|++.........+..|...+.+ ++|+||+++|+.++.+ + .|..|+..... .... .|...+.+++|| |++
T Consensus 338 ~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l-~~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDL-TPESGMHRTQLSPDGS 413 (706)
T ss_dssp EEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEES-CCSSSEEEEEECTTSS
T ss_pred EEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceec-cCCCceEEEEECCCCC
Confidence 9865222234455667777877 8999999887665544 3 44445544322 2222 377789999999 777
Q ss_pred eEEEEeCC----CcEEEEEccC
Q 007283 591 SVVSSGED----ACVRVWRLTP 608 (609)
Q Consensus 591 ~l~s~s~D----~~i~~W~~~~ 608 (609)
+|+....+ +.+.+|++..
T Consensus 414 ~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 414 AIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEEEECSSCSCEEEEEESSS
T ss_pred EEEEEecCCCCCcEEEEEECCC
Confidence 77655433 5699999753
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=3.6e-19 Score=189.71 Aligned_cols=138 Identities=13% Similarity=0.088 Sum_probs=113.3
Q ss_pred eEEEEcCCCCEEEEEeCC----CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCC--eEEEEEccCCc
Q 007283 451 TASAIAPDGSEAIIGSQD----GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNR--EAIVWDRVSRE 524 (609)
Q Consensus 451 ~~~~~sp~g~~l~~gs~d----g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~--~v~iwd~~~~~ 524 (609)
..++++|||+++|.++.| +.|++||+.++.. ..+..|.+.+..++|||||+.+++++.++ +|++||+.+++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~---~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL---RVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC---EEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc---eEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 456789999999988877 7899999887664 35678889999999999999999888898 89999998776
Q ss_pred eEEeeecCCCCceEEEE--------ECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEe
Q 007283 525 VKLKNMLYHTARINCLA--------WSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSG 596 (609)
Q Consensus 525 ~~~~~~~~h~~~i~~l~--------~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 596 (609)
.. .+..|...+..++ |||||+++++++.|+++++|++ +. ... .+.+.|.+++|++++.+++++
T Consensus 230 ~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~--~~~---~~~~~v~~~~~sdg~~l~~~s 300 (582)
T 3o4h_A 230 VE--DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE--RVE---APQGNHGRVVLWRGKLVTSHT 300 (582)
T ss_dssp EE--ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE--EEC---CCSSEEEEEEEETTEEEEEEE
T ss_pred EE--EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC--eec---cCCCceEEEEecCCEEEEEEc
Confidence 54 4566777777777 9999999999999999999998 22 111 345678999999777888887
Q ss_pred CCCc
Q 007283 597 EDAC 600 (609)
Q Consensus 597 ~D~~ 600 (609)
.+.+
T Consensus 301 ~~~~ 304 (582)
T 3o4h_A 301 SLST 304 (582)
T ss_dssp ETTE
T ss_pred CCCC
Confidence 7755
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=7.1e-18 Score=167.57 Aligned_cols=203 Identities=12% Similarity=0.086 Sum_probs=156.9
Q ss_pred CCCcEEEEECCCCCEEEEEeC-------CCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 57 AYPATVARFSPNGEWIASADV-------SGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~-------d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
...+..++|+|+|++|+.++. +++|.+||..+++... .+.. ...+..++|+|||+++++++.... .+.+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~-~~~~~~~~~s~dg~~l~v~~~~~~--~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ-AIHN-DLKPFGATINNTTQTLWFGNTVNS--AVTA 115 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE-EEEE-SSCCCSEEEETTTTEEEEEETTTT--EEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE-EEec-CCCcceEEECCCCCEEEEEecCCC--EEEE
Confidence 456889999999999887764 5689999998876433 3332 345788999999998877765432 4667
Q ss_pred EEcCCCCeeEEEecCCc---------cEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeeeccCcccceEEEEEcCC
Q 007283 130 FMWDSGTNVGEFDGHSR---------RVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPD 199 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 199 (609)
++.++++.+..+..+.. .+..++|+|++..+++++ +.++.+.+||..+++....+..+...+.+++|+|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 77777777777765432 278899999998766665 56889999999988887777656666889999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCccccccCc-CCCCccceEEEEECCCCCeEEEEeC-CCcEEEeecc
Q 007283 200 GSKFISVSSDKKGIIYDGKTADKIGELSP-EDGHKGSVYAVSWSPDGKQVLTASA-DKSAKVWDIS 263 (609)
Q Consensus 200 g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~h~~~V~~l~~spd~~~l~s~s~-d~~i~iwd~~ 263 (609)
|+.|++++.++.+.+||..+++.+..+.. ..++...+.+++|+|++++++.++. ++.|.+||+.
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 99999999999999999998887665532 1235667889999999997766654 5899999986
No 147
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=1.7e-19 Score=197.39 Aligned_cols=324 Identities=11% Similarity=0.055 Sum_probs=205.9
Q ss_pred eeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCC---CcEEEEECCCCCEEEEEeC---------CCcEEEEcC
Q 007283 19 GILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAY---PATVARFSPNGEWIASADV---------SGTVRIWGA 86 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~---~v~~~~~sp~g~~las~~~---------d~~i~vWd~ 86 (609)
+..+.++|||+.++...++.+.+||+.+++....+.+|.. .+.+++|||||++||+++. |++|++||+
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 3477899999655555567999999999887666665543 4899999999999998876 789999999
Q ss_pred CCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccE-----------------
Q 007283 87 HNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRV----------------- 148 (609)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v----------------- 148 (609)
.+++.+. .......+..++|||||++|+.+.++ .+++|+.+.+...... .++...|
T Consensus 98 ~~g~~~~--~~~l~~~~~~~~~SPDG~~la~~~~~----~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 98 SNGEFVR--GNELPRPIQYLCWSPVGSKLAYVYQN----NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTTEECC--SSCCCSSBCCEEECSSTTCEEEEETT----EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCCcccc--ceecCcccccceECCCCCEEEEEECC----eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 8876411 01123568899999999999998754 3444444444432211 2333222
Q ss_pred EEEEEeeCCCeEEEEecCCC----------------------------------eEEEEeCCCCcee--------eeccC
Q 007283 149 LSCAFKPSRPFRIATCGEDF----------------------------------LVNFYEGPPFKFK--------LSHRG 186 (609)
Q Consensus 149 ~~~~~~p~~~~~i~t~~~d~----------------------------------~i~~~~~~~~~~~--------~~~~~ 186 (609)
.+++|+|||.. |+.++.|. .+.+||...++.. ..+.+
T Consensus 172 ~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 172 YALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp CCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred ccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 48999999986 66655431 6788998776542 12346
Q ss_pred cccceEEEEEcCCCCEEEEEeCC----CcEEEEe----CCCCccccccC-cCCCCccceE-----EEEECCCCCeEEE--
Q 007283 187 HSNFVNCVRFSPDGSKFISVSSD----KKGIIYD----GKTADKIGELS-PEDGHKGSVY-----AVSWSPDGKQVLT-- 250 (609)
Q Consensus 187 h~~~v~~l~~s~dg~~l~s~~~d----~~i~iwd----~~~~~~~~~~~-~~~~h~~~V~-----~l~~spd~~~l~s-- 250 (609)
|...+..++|+||++.+++.... ..+.+|| ..+++....+. ...+|.+.+. .+.|+|||+.|+.
T Consensus 251 ~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 251 SDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp SCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred CcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEE
Confidence 88899999999998766664432 2488889 77776544331 0024666666 8899999996654
Q ss_pred EeCCC--cEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcC-----CcEEEEeCCCCCC--Cceee-
Q 007283 251 ASADK--SAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLG-----GTISIFSANDLEK--SPLQL- 320 (609)
Q Consensus 251 ~s~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~~~~~~~~--~~~~~- 320 (609)
...++ +|.+||+.. ++ ...+... ...+.. . ..++++.++..+.+ +..++|.++.... ....+
T Consensus 331 ~~~~g~~~l~~~~~~~---~~-~~~lt~~-~~~v~~--~-~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~ 402 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTV---EN-AIQITSG-KWEAIN--I-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVT 402 (719)
T ss_dssp ECTTSCEEEEEESSCS---TT-CEECSCS-SSCEEE--E-EEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESS
T ss_pred EccCCceEEEEEECCC---Cc-eEecccC-ceEEEE--E-EEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceecc
Confidence 44555 456666643 22 2233221 111111 1 22355666666654 7788987653211 11222
Q ss_pred ---eCCCCCeEEEEEecCCCCEEEEEecC--CcEEEEecCcc
Q 007283 321 ---SGHMKNVTALTVLNIDPKVILSSSYD--GLIVKWIQGIG 357 (609)
Q Consensus 321 ---~~h~~~v~~~~~~~~~~~~~~t~s~d--g~i~~W~~~~~ 357 (609)
.+|...+..+.+++....++++++.+ ..+.+|+..++
T Consensus 403 ~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g 444 (719)
T 1z68_A 403 CHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTD 444 (719)
T ss_dssp TTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSC
T ss_pred CccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCC
Confidence 23666677777775445566666655 45777866543
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=3.5e-17 Score=163.25 Aligned_cols=317 Identities=13% Similarity=0.077 Sum_probs=186.4
Q ss_pred cCCCeEEEEeC--CCCceeeeccCcccceEEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CccccccCcCCCCccce
Q 007283 165 GEDFLVNFYEG--PPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD----KKGIIYDGKT--ADKIGELSPEDGHKGSV 236 (609)
Q Consensus 165 ~~d~~i~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d----~~i~iwd~~~--~~~~~~~~~~~~h~~~V 236 (609)
+.++.|.+|.. .+++.......+......++|+|||++|++++.+ +.+.+|++.. ++ +..+.....+....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~-~~~~~~~~~~~~~p 102 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT-LHLLNTQKTMGADP 102 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE-EEEEEEEECSSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc-EEEeeEeccCCCCc
Confidence 34566777753 4454433221266677889999999999998876 7999997654 33 22221111234456
Q ss_pred EEEEECCCCCeEEEEe-CCCcEEEeecccCCCC-ceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCC
Q 007283 237 YAVSWSPDGKQVLTAS-ADKSAKVWDISEDNHG-KLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLE 314 (609)
Q Consensus 237 ~~l~~spd~~~l~s~s-~d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~ 314 (609)
..+++ ++++|++++ .++.+.+|++...... .........+. ..
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~---------------------------------~~ 147 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGS---------------------------------GP 147 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCC---------------------------------CS
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCC---------------------------------CC
Confidence 77887 888777776 5789999998632110 00000000000 00
Q ss_pred CCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEec
Q 007283 315 KSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSL 394 (609)
Q Consensus 315 ~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 394 (609)
.....+...+.++++++....++++...++.|.+|+.+....... ...+.. .+ ..
T Consensus 148 ---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~----~~~l~~---------~~----~~----- 202 (361)
T 3scy_A 148 ---DKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN----KEKFLT---------KG----TP----- 202 (361)
T ss_dssp ---CTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT----CCCCEE---------EE----EE-----
T ss_pred ---CccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc----ccceee---------cc----cc-----
Confidence 000112334566777654333556666688999996543210000 000000 00 00
Q ss_pred cCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEe-CCCcEEE
Q 007283 395 QGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGS-QDGKLRV 473 (609)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs-~dg~i~i 473 (609)
.............++|+|||+++++++ .++.|++
T Consensus 203 ---------------------------------------------~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 203 ---------------------------------------------EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIA 237 (361)
T ss_dssp ---------------------------------------------EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEE
T ss_pred ---------------------------------------------cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEE
Confidence 000000112356789999999887777 6899999
Q ss_pred EEecCCeeeeeEEEe---cCCCceEEEEECCCCCEEEEEeC--CCeEEEEEcc--CCceE-EeeecCCCCceEEEEECCC
Q 007283 474 YSIRGDTLTEEAVLE---KHRGAVSVIRYSPDVSMFASGDV--NREAIVWDRV--SREVK-LKNMLYHTARINCLAWSPN 545 (609)
Q Consensus 474 w~~~~~~~~~~~~~~---~h~~~i~~v~~s~~~~~l~s~s~--d~~v~iwd~~--~~~~~-~~~~~~h~~~i~~l~~s~d 545 (609)
|++.++.+.....+. .+...+..++|+|||++++++.. ++++.+|++. ++... +..+.. ...+.+++|+||
T Consensus 238 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spd 316 (361)
T 3scy_A 238 FRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPN 316 (361)
T ss_dssp EEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTT
T ss_pred EEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCC
Confidence 999877654333332 33345789999999998876665 4899999985 33322 222222 456889999999
Q ss_pred CcEEEEEe-CCCeEEEEEcCCCCCcceeE-eccccCCeEEEEEcC
Q 007283 546 NSMVATGS-LDTCVIIYEIDKPASSRMTI-KGAHLGGVYGLAFTD 588 (609)
Q Consensus 546 ~~~l~s~s-~D~~v~vw~~~~~~~~~~~~-~~~h~~~v~~~~~s~ 588 (609)
|++|++++ .++.|.+|+++.....+..+ ...+...+.|+.|.|
T Consensus 317 g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~~ 361 (361)
T 3scy_A 317 GKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFVD 361 (361)
T ss_dssp SCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEEC
T ss_pred CCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEcC
Confidence 99888887 67999998876432222222 134667889999863
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=1.9e-17 Score=164.20 Aligned_cols=283 Identities=12% Similarity=0.080 Sum_probs=175.9
Q ss_pred CCeEEEEe--CCCCceee-eccCcccceEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCccccccCcCCCCccceEEEE
Q 007283 167 DFLVNFYE--GPPFKFKL-SHRGHSNFVNCVRFSPDGSKFISVSS---DKKGIIYDGKTADKIGELSPEDGHKGSVYAVS 240 (609)
Q Consensus 167 d~~i~~~~--~~~~~~~~-~~~~h~~~v~~l~~s~dg~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~ 240 (609)
+..+.+|. ..+++... ....+......++|+|||+ |++++. ++.+.+|+..+++.. .+.....+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~-~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH-KLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE-EEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE-EeeeeecCCCCCEEEE
Confidence 44566654 44455433 2334556678899999999 555544 689999998665421 1111123556788999
Q ss_pred ECCCCCeEEEEe-CCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCcee
Q 007283 241 WSPDGKQVLTAS-ADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQ 319 (609)
Q Consensus 241 ~spd~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 319 (609)
|+|||++|++++ .++.+++|++...........+...+ ..+ .
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~-----------------------------------~~p-~- 135 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSG-----------------------------------HGP-R- 135 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCC-----------------------------------CCS-S-
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCC-----------------------------------CCC-C-
Confidence 999999888887 67999999985321111111111000 000 0
Q ss_pred eeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCcc
Q 007283 320 LSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQC 399 (609)
Q Consensus 320 ~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 399 (609)
...+...+.++++++.. +++++...++.|.+|+..... .+... ...
T Consensus 136 ~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~~~g----------~~~~~----------------~~~------- 181 (347)
T 3hfq_A 136 PEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVSDAG----------QLSEQ----------------SVL------- 181 (347)
T ss_dssp TTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEECTTS----------CEEEE----------------EEE-------
T ss_pred ccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEECCCC----------cEEEe----------------eeE-------
Confidence 01133456677776544 477777788899999764110 00000 000
Q ss_pred ccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEE-EeCCCcEEEEEecC
Q 007283 400 GYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAII-GSQDGKLRVYSIRG 478 (609)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~-gs~dg~i~iw~~~~ 478 (609)
..........++++|||+++++ +..++.|++|++..
T Consensus 182 -------------------------------------------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 182 -------------------------------------------TMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp -------------------------------------------ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred -------------------------------------------EcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0000112456889999996655 56788999999874
Q ss_pred --CeeeeeEEEecCC------CceEEEEECCCCCEE-EEEeCCCeEEEEEccCC-c-eEEeeecCCCCceEEEEECCCCc
Q 007283 479 --DTLTEEAVLEKHR------GAVSVIRYSPDVSMF-ASGDVNREAIVWDRVSR-E-VKLKNMLYHTARINCLAWSPNNS 547 (609)
Q Consensus 479 --~~~~~~~~~~~h~------~~i~~v~~s~~~~~l-~s~s~d~~v~iwd~~~~-~-~~~~~~~~h~~~i~~l~~s~d~~ 547 (609)
+.+.......... ..+..++|+|||+++ ++...++++.+|++... . ..+..+..+...+.+++|+|||+
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC
Confidence 4443333333332 358899999999977 56667899999998632 2 22333444566789999999999
Q ss_pred EEEEEeCC-CeEEEEEcCC
Q 007283 548 MVATGSLD-TCVIIYEIDK 565 (609)
Q Consensus 548 ~l~s~s~D-~~v~vw~~~~ 565 (609)
+|++++.+ +.|.+|+++.
T Consensus 299 ~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 299 FVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEETTTTEEEEEEECT
T ss_pred EEEEEEcCCCcEEEEEEeC
Confidence 88888765 8999997764
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=9e-18 Score=166.80 Aligned_cols=248 Identities=13% Similarity=0.092 Sum_probs=182.2
Q ss_pred cCceeEEeecCCCCeEEEeC--------CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcC
Q 007283 16 RGRGILISGHPKSNSILYTN--------GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGA 86 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~--------~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~ 86 (609)
.+.+..+.++|+|+.++... ++.+.+||+.+++....+.. ...+..++|+|+|++++ +...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 34567899999999887665 45899999998887665543 34578899999999665 5566899999999
Q ss_pred CCCceeeEEEeeccc---------ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCC
Q 007283 87 HNDHVLKKEFRVLSG---------RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSR 157 (609)
Q Consensus 87 ~~~~~~~~~~~~~~~---------~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (609)
.+++... .+..+.. .+..++|+|||+++++.+.+. ...+.+++.++++....+..+...+..++|+|++
T Consensus 119 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 119 KTGEVKG-RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTCCEEE-EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCeeEE-EEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 8876533 3433321 268899999999888776322 2235566666666677776566668889999999
Q ss_pred CeEEEEecCCCeEEEEeCCCCceeeecc----CcccceEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCccccccCcCCCC
Q 007283 158 PFRIATCGEDFLVNFYEGPPFKFKLSHR----GHSNFVNCVRFSPDGSKFISVSS-DKKGIIYDGKTADKIGELSPEDGH 232 (609)
Q Consensus 158 ~~~i~t~~~d~~i~~~~~~~~~~~~~~~----~h~~~v~~l~~s~dg~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~h 232 (609)
.. +++++.++.+.+||..+++....+. ++...+..++|+|+|+.+++++. ++.+.+||..+++.+..+.. +.
T Consensus 197 ~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~ 273 (353)
T 3vgz_A 197 KR-LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA--PE 273 (353)
T ss_dssp TE-EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC--SS
T ss_pred CE-EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc--CC
Confidence 86 6666778999999998887665543 35667889999999997766655 58999999998887766542 11
Q ss_pred ccceEEEEECCCCCeEEEEe-CCCcEEEeecccCCCCceEEEec
Q 007283 233 KGSVYAVSWSPDGKQVLTAS-ADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 233 ~~~V~~l~~spd~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
-..++|+|++++++.+. .++.|.+||+.. ++....+.
T Consensus 274 ---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~ 311 (353)
T 3vgz_A 274 ---SLAVLFNPARNEAYVTHRQAGKVSVIDAKS---YKVVKTFD 311 (353)
T ss_dssp ---CCCEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEEEE
T ss_pred ---CceEEECCCCCEEEEEECCCCeEEEEECCC---CeEEEEEe
Confidence 25699999999655554 689999999863 45554443
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=3.6e-18 Score=169.42 Aligned_cols=244 Identities=11% Similarity=0.098 Sum_probs=163.6
Q ss_pred cCceeEEeecCCCCeEEEeC----CCEEEEEeCCCCc--cccccccCCCCcEEEEECCCCCEEEEEe-CCCcEEEEcCCC
Q 007283 16 RGRGILISGHPKSNSILYTN----GRSVIILDLSNPL--QVSIYGEHAYPATVARFSPNGEWIASAD-VSGTVRIWGAHN 88 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~----~~~~~i~~~~~~~--~~~~~~~h~~~v~~~~~sp~g~~las~~-~d~~i~vWd~~~ 88 (609)
.+.|..++++|||+ |+... .+.+.+|++.++. .+..+..|...+..++|+|||++|++++ .+++|++|++..
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 35667899999998 54432 2689999997655 3333345677889999999999998877 789999999963
Q ss_pred Cceee--EEEeec---------ccceeEEEECCCCCEEEEEECCCCcceEEEEEcC-CCCee--EEEecC-CccEEEEEE
Q 007283 89 DHVLK--KEFRVL---------SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD-SGTNV--GEFDGH-SRRVLSCAF 153 (609)
Q Consensus 89 ~~~~~--~~~~~~---------~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~h-~~~v~~~~~ 153 (609)
...+. ..+... ...+..++|+|||+ ++++..+.+ .+++|+.+ .+... ..+..+ ...+..++|
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSD--KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTT--EEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCC--EEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 22111 112111 12377899999999 665553332 45667766 33321 222222 235778999
Q ss_pred eeCCCeEEEEecCCCeEEEEeCCC--Ccee--eeccCcc------cceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCcc
Q 007283 154 KPSRPFRIATCGEDFLVNFYEGPP--FKFK--LSHRGHS------NFVNCVRFSPDGSKF-ISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 154 ~p~~~~~i~t~~~d~~i~~~~~~~--~~~~--~~~~~h~------~~v~~l~~s~dg~~l-~s~~~d~~i~iwd~~~~~~ 222 (609)
+|++..+++++..++.+.+|+... ++.. ....... ..+..++|+|||++| ++...++.+.+|+......
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 999997777788889999998653 4322 1221111 458889999999977 5556789999999863221
Q ss_pred ccccCcCCCCccceEEEEECCCCCeEEEEeCC-CcEEEeecc
Q 007283 223 IGELSPEDGHKGSVYAVSWSPDGKQVLTASAD-KSAKVWDIS 263 (609)
Q Consensus 223 ~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d-~~i~iwd~~ 263 (609)
+..+.....+...+..++|+|||++|++++.+ +.+.+|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 275 LTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 11111112345568899999999988888764 899999664
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=4.2e-18 Score=167.94 Aligned_cols=269 Identities=12% Similarity=0.046 Sum_probs=174.6
Q ss_pred EEEEecCCCeEEEEeCCCCceeeecc-Cccc-ceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCccccccCcCC--CCcc
Q 007283 160 RIATCGEDFLVNFYEGPPFKFKLSHR-GHSN-FVNCVRFSPDGSKF-ISVSSDKKGIIYDGKTADKIGELSPED--GHKG 234 (609)
Q Consensus 160 ~i~t~~~d~~i~~~~~~~~~~~~~~~-~h~~-~v~~l~~s~dg~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~--~h~~ 234 (609)
.+++++.++.+.+||..+++....+. ++.. .+..++|+|+|+.+ +++..++.+.+||..+++.+..+.... .|..
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 48888999999999998887766554 3322 37889999999865 455567899999999888765543210 0223
Q ss_pred ceEEEEECCCCCeEEEEe------------CCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcC
Q 007283 235 SVYAVSWSPDGKQVLTAS------------ADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLG 302 (609)
Q Consensus 235 ~V~~l~~spd~~~l~s~s------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (609)
.+.+++|+|+|++|++++ .++.|++||+.. ++....+..
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~---~~~~~~~~~-------------------------- 133 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET---LSRRKAFEA-------------------------- 133 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT---TEEEEEEEC--------------------------
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCC---CcEEEEEeC--------------------------
Confidence 577899999999988886 578999999852 222222110
Q ss_pred CcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEE
Q 007283 303 GTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVT 382 (609)
Q Consensus 303 g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (609)
...+..+++++ +++.++.+ ++.|.+|+...+.....
T Consensus 134 ---------------------~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~-------------------- 169 (337)
T 1pby_B 134 ---------------------PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVED-------------------- 169 (337)
T ss_dssp ---------------------CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEE--------------------
T ss_pred ---------------------CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeee--------------------
Confidence 01123344443 33444444 67888887654311000
Q ss_pred EeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEE
Q 007283 383 SGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEA 462 (609)
Q Consensus 383 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l 462 (609)
+.... ..... +++|||+.+
T Consensus 170 ---------~~~~~-------------~~~~~---------------------------------------~~s~dg~~l 188 (337)
T 1pby_B 170 ---------KPIQS-------------WEAET---------------------------------------YAQPDVLAV 188 (337)
T ss_dssp ---------ECSTT-------------TTTTT---------------------------------------BCCCBCCCC
T ss_pred ---------eeccc-------------cCCCc---------------------------------------eeCCCccEE
Confidence 00000 00000 112222211
Q ss_pred EEE--------------eCC----------CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEE
Q 007283 463 IIG--------------SQD----------GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVW 518 (609)
Q Consensus 463 ~~g--------------s~d----------g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iw 518 (609)
+.. ..+ ..|.+||+.++... ...+..+...+.+++|+|||++++++ ++.+++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF 265 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence 111 111 15889998877654 44456677788999999999999988 7999999
Q ss_pred EccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCC
Q 007283 519 DRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPA 567 (609)
Q Consensus 519 d~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~ 567 (609)
|+.+.+... .+. ....+.+++|+||+++|++++.|+.|.+||+....
T Consensus 266 d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 266 DLEKNASIK-RVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ETTTTEEEE-EEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ECCCCcCcc-eec-CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 987765432 222 34568899999999999999999999999987643
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=1.8e-18 Score=184.38 Aligned_cols=273 Identities=12% Similarity=0.037 Sum_probs=181.4
Q ss_pred CCCcEEEEECCCCCEEEEEeC-CCcEEEEcCCCCceeeEEEeecc-cceeEEEECCCCCEEEEEECCCCcceEEEEEcCC
Q 007283 57 AYPATVARFSPNGEWIASADV-SGTVRIWGAHNDHVLKKEFRVLS-GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS 134 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~-d~~i~vWd~~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 134 (609)
..+|.+++|+|||++||+++. ||+++||++.+++. ..+..+. ..+..++|||| +.+++.....+....++|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--VKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--EECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc--EeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 567999999999999998876 99999999865542 3344554 57999999999 5444444212233456666654
Q ss_pred --CCeeEEEecCCccEEEEEEeeCCCeE-EEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC--
Q 007283 135 --GTNVGEFDGHSRRVLSCAFKPSRPFR-IATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD-- 209 (609)
Q Consensus 135 --~~~~~~~~~h~~~v~~~~~~p~~~~~-i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-- 209 (609)
......+.... .+...+|+|++..+ +++++.+.. .+|+..+++.......+. .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 98 SRPGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp TSTTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET
T ss_pred cCCCccccccCCC-CceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC
Confidence 32222333222 23466888988654 455555554 499987776554443332 788999999999988877
Q ss_pred --CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCC--cEEEeecccCCCCceEEEeccCCCCCccce
Q 007283 210 --KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADK--SAKVWDISEDNHGKLKKTLTPSGSGGVDDM 285 (609)
Q Consensus 210 --~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 285 (609)
..+++||..+++.. .+ .+|.+.+..++|||||++|+++..++ +|++||+.. ++.. .+. .....+...
T Consensus 173 ~~~~i~~~d~~~g~~~-~l---~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~---~~~~-~~~-~~~~~~~~~ 243 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLR-VF---DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD---GSVE-DLE-LPSKDFSSY 243 (582)
T ss_dssp TEEEEEEEETTTCCCE-EE---CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT---CCEE-ECC-CSCSHHHHH
T ss_pred CCeEEEEEcCCCCCce-Ee---ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC---CcEE-Ecc-CCCcChhhh
Confidence 78999998887754 33 36778899999999999999888888 899999863 3333 222 221111111
Q ss_pred E----EEEEEc--CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCc---EEEEec
Q 007283 286 L----VGCLWQ--NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGL---IVKWIQ 354 (609)
Q Consensus 286 ~----~~~~~~--~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~---i~~W~~ 354 (609)
. ....|+ +.++++++.++++++|.+ . . ........+..++++ +++++++++.+.+ +.+|+.
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g-~---~~~~~~~~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--G-E---RVEAPQGNHGRVVLW--RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET--T-E---EECCCSSEEEEEEEE--TTEEEEEEEETTEEEEEEEETT
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE--C-C---eeccCCCceEEEEec--CCEEEEEEcCCCCCCeEEEEcC
Confidence 1 111243 447778888999999997 1 1 111344567788887 5577888877754 444543
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=4.9e-18 Score=172.97 Aligned_cols=211 Identities=13% Similarity=0.114 Sum_probs=151.2
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCcc----------c-----cccccCCCCcEEEEECCCCCEEE----EEeCC
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQ----------V-----SIYGEHAYPATVARFSPNGEWIA----SADVS 78 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~----------~-----~~~~~h~~~v~~~~~sp~g~~la----s~~~d 78 (609)
....++.++++..++......+.||+..+... . .....|.+.|++++|+|+|++|| +++.|
T Consensus 38 ~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred CccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 34578888888888877666688877532100 0 00123566799999999999999 89999
Q ss_pred CcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCC
Q 007283 79 GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRP 158 (609)
Q Consensus 79 ~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (609)
++|+|||+.+... ...... +. + .....+.+|...|.+++|+|++.
T Consensus 118 ~~v~iwd~~~~~~------~~~~~~---------~~-----------~---------~~~~~~~~h~~~V~~v~~~p~~~ 162 (434)
T 2oit_A 118 SIIAFFDVRTFSN------EAKQQK---------RP-----------F---------AYHKLLKDAGGMVIDMKWNPTVP 162 (434)
T ss_dssp EEEEEEEHHHHHC------TTCSSC---------CC-----------S---------EEEECCCSGGGSEEEEEECSSCT
T ss_pred ceEEEEEcccccc------CCcCCc---------ce-----------e---------eeeeccCCCCCceEEEEECCCCC
Confidence 9999999865310 000000 00 0 00123457888999999999855
Q ss_pred eEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcC----CCCcc
Q 007283 159 FRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPE----DGHKG 234 (609)
Q Consensus 159 ~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~h~~ 234 (609)
..+++++.|+.+++||...........+|...|++++|+|+|++|++|+.|+.|++||.+ ++....+... ..|..
T Consensus 163 ~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~ 241 (434)
T 2oit_A 163 SMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPV 241 (434)
T ss_dssp TEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCE
T ss_pred CEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCce
Confidence 579999999999999998876666677899999999999999999999999999999987 3333222111 13455
Q ss_pred ceEEEEECCCCCeEEEE-eCCC------cEEEeeccc
Q 007283 235 SVYAVSWSPDGKQVLTA-SADK------SAKVWDISE 264 (609)
Q Consensus 235 ~V~~l~~spd~~~l~s~-s~d~------~i~iwd~~~ 264 (609)
.|.+++|++++.++++. +.|| .+++|++..
T Consensus 242 ~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 242 RVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred eEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 89999999998877554 3443 389999864
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=8e-18 Score=184.17 Aligned_cols=195 Identities=12% Similarity=0.122 Sum_probs=131.0
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeeccc---ceeEEEECCCCCEEEEEECCCC------cceEEEEEc
Q 007283 62 VARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSG---RIDDLQWSPDGLRIVACGDGKG------KSLVRAFMW 132 (609)
Q Consensus 62 ~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~~~------~~~~~~~~~ 132 (609)
.++|+|||++++++ .|++|++||+.+++.. ..+..+.. .+..++|||||++|+.+++... ...+++|+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY-TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE-EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE-EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 67899999877765 5999999999887642 22333322 3899999999999998765211 123445554
Q ss_pred CCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeec-cCcccce-----------------EEE
Q 007283 133 DSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSH-RGHSNFV-----------------NCV 194 (609)
Q Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~-~~h~~~v-----------------~~l 194 (609)
++++.+.. ..-...+..++|+|+|.. ||.+. ++.|++|+...++..... .++...| .++
T Consensus 98 ~~g~~~~~-~~l~~~~~~~~~SPDG~~-la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 98 SNGEFVRG-NELPRPIQYLCWSPVGSK-LAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTTEECCS-SCCCSSBCCEEECSSTTC-EEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCCccccc-eecCcccccceECCCCCE-EEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 44443100 111246788999999986 65554 678999998776554322 3333322 489
Q ss_pred EEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCccc--cccC---cCCCCccc
Q 007283 195 RFSPDGSKFISVSSDK----------------------------------KGIIYDGKTADKI--GELS---PEDGHKGS 235 (609)
Q Consensus 195 ~~s~dg~~l~s~~~d~----------------------------------~i~iwd~~~~~~~--~~~~---~~~~h~~~ 235 (609)
+|||||+.|++++.|. .+.+||..+++.. ..+. ...+|...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 9999999999988652 7789998887643 1111 01257888
Q ss_pred eEEEEECCCCCeEEEEeCC----CcEEEee
Q 007283 236 VYAVSWSPDGKQVLTASAD----KSAKVWD 261 (609)
Q Consensus 236 V~~l~~spd~~~l~s~s~d----~~i~iwd 261 (609)
+.+++|+||++++++.... ..|++||
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEE
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEc
Confidence 9999999998877774432 2377777
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=5.4e-18 Score=167.16 Aligned_cols=238 Identities=16% Similarity=0.111 Sum_probs=173.4
Q ss_pred ceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccc-cC----CCCcEEEEECCCCCEEEEEe------------CC
Q 007283 18 RGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYG-EH----AYPATVARFSPNGEWIASAD------------VS 78 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~-~h----~~~v~~~~~sp~g~~las~~------------~d 78 (609)
.+..+.++|+|+.++... ++.+.+||+.+++....+. ++ ...+..++|+|+|++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 466889999998775543 4799999998887665443 22 22677899999999998876 57
Q ss_pred CcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCC--ccEEEEEEeeC
Q 007283 79 GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHS--RRVLSCAFKPS 156 (609)
Q Consensus 79 ~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~ 156 (609)
+.|.+||..+++.. ..+.. ...+..++|+|||++|+++ ++ .+.+|+.+.++....+..+. .+ +.|+|+
T Consensus 115 ~~i~v~d~~~~~~~-~~~~~-~~~~~~~~~s~dg~~l~~~-~~----~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~d 184 (337)
T 1pby_B 115 TRVALYDAETLSRR-KAFEA-PRQITMLAWARDGSKLYGL-GR----DLHVMDPEAGTLVEDKPIQSWEAE---TYAQPD 184 (337)
T ss_dssp CEEEEEETTTTEEE-EEEEC-CSSCCCEEECTTSSCEEEE-SS----SEEEEETTTTEEEEEECSTTTTTT---TBCCCB
T ss_pred ceEEEEECCCCcEE-EEEeC-CCCcceeEECCCCCEEEEe-CC----eEEEEECCCCcEeeeeeccccCCC---ceeCCC
Confidence 99999999876643 23332 4567889999999988876 22 35667766666666665443 32 277898
Q ss_pred CCeEEEEecCCC-----------------------eEEEEeCCCCcee-eeccCcccceEEEEEcCCCCEEEEEeCCCcE
Q 007283 157 RPFRIATCGEDF-----------------------LVNFYEGPPFKFK-LSHRGHSNFVNCVRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 157 ~~~~i~t~~~d~-----------------------~i~~~~~~~~~~~-~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i 212 (609)
+..+++++..++ .+.+||..+++.. ..+..+...+.+++|+|||++++++ ++.+
T Consensus 185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v 262 (337)
T 1pby_B 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL 262 (337)
T ss_dssp CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence 876555444444 3578888776653 2344566678899999999988887 7999
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEe
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~ 274 (609)
.+||..+++.+..+. ....+.+++|+|||++|++++.++.|++||+.. ++....+
T Consensus 263 ~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~---~~~~~~~ 317 (337)
T 1pby_B 263 ESFDLEKNASIKRVP----LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAET---LEKKGQV 317 (337)
T ss_dssp EEEETTTTEEEEEEE----CSSCCCEEEECTTSCEEEEESBSSEEEEEETTT---CCEEEEE
T ss_pred EEEECCCCcCcceec----CCCceeeEEECCCCCEEEEEcCCCcEEEEECcC---CcEEEEE
Confidence 999999887766553 224578999999999999999999999999863 4444444
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=8e-17 Score=159.61 Aligned_cols=152 Identities=11% Similarity=0.089 Sum_probs=98.8
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecc-cceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEE
Q 007283 62 VARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLS-GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGE 140 (609)
Q Consensus 62 ~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (609)
.++++++++++++++.+++|++||..+++.+. .+.... ..+..++|+|||+++++++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~~~v~~--------------------- 61 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYK-SCVMPDKFGPGTAMMAPDNRTAYVLN--------------------- 61 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE-EEECSSCCSSCEEEECTTSSEEEEEE---------------------
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEE-EEecCCCCCCceeEECCCCCEEEEEe---------------------
Confidence 45688999999999999999999998876432 232221 1355666666665544433
Q ss_pred EecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc-Cc-----ccceEEEEEcCCCCEEEEEeCC-----
Q 007283 141 FDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR-GH-----SNFVNCVRFSPDGSKFISVSSD----- 209 (609)
Q Consensus 141 ~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-~h-----~~~v~~l~~s~dg~~l~s~~~d----- 209 (609)
..++.+.+||..+++....+. ++ ...+.+++|+|||++|++++.+
T Consensus 62 ------------------------~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 117 (349)
T 1jmx_B 62 ------------------------NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN 117 (349)
T ss_dssp ------------------------TTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECS
T ss_pred ------------------------CCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccc
Confidence 333444445444443332221 11 2336788999999999988865
Q ss_pred -------CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 210 -------KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 210 -------~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+.+.+||..+++....+... .+...+.+++|+|||+ ++.++. .|++||+.
T Consensus 118 ~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~ 174 (349)
T 1jmx_B 118 DHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVK 174 (349)
T ss_dssp SCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEESS--SEEEECTT
T ss_pred cccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEEccC--cEEEEeCC
Confidence 89999998875543322111 2334688999999999 555543 49999975
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=4.7e-16 Score=154.99 Aligned_cols=287 Identities=11% Similarity=0.144 Sum_probs=177.5
Q ss_pred CCEEEEEeC--CCCccccccccCCCCcEEEEECCCCCEEEEEeCC----CcEEEEcCCCC-ceee--EEEeecccceeEE
Q 007283 36 GRSVIILDL--SNPLQVSIYGEHAYPATVARFSPNGEWIASADVS----GTVRIWGAHND-HVLK--KEFRVLSGRIDDL 106 (609)
Q Consensus 36 ~~~~~i~~~--~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d----~~i~vWd~~~~-~~~~--~~~~~~~~~v~~~ 106 (609)
++.+.+|.+ .+++.......|......++|+|||++|++++.+ +.|++|++... ..+. .....+......+
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~ 105 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYL 105 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEE
T ss_pred CCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEE
Confidence 357778766 3444322222266778889999999999988875 79999998763 2222 2222234456777
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeE---EE---ec--------CCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG---EF---DG--------HSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~--------h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
++ ||++|+++.... ..+.+|+.+....+. .. .+ +...+.+++|+|++..+++++..++.+.+
T Consensus 106 ~~--dg~~l~~~~~~~--~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 106 TT--NGKNIVTANYSG--GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EE--CSSEEEEEETTT--TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EE--CCCEEEEEECCC--CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 77 888888876433 245666665432221 11 11 12346789999999977777777889999
Q ss_pred EeCCCCc-------e------eeeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCcc--ccccCcCCCCccce
Q 007283 173 YEGPPFK-------F------KLSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADK--IGELSPEDGHKGSV 236 (609)
Q Consensus 173 ~~~~~~~-------~------~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~--~~~~~~~~~h~~~V 236 (609)
|+..... . ......+.....+++|+|||+++++++ .++.+.+|+..+++. +..+.....+....
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 9765332 1 111223445578999999999887777 689999999876543 22222222344557
Q ss_pred EEEEECCCCCeEEEEeC--CCcEEEeecccCCCCc--eEEEeccCCCCCccceEEEEEEc--CCeEEEEE-cCCcEEEEe
Q 007283 237 YAVSWSPDGKQVLTASA--DKSAKVWDISEDNHGK--LKKTLTPSGSGGVDDMLVGCLWQ--NDFLVIVS-LGGTISIFS 309 (609)
Q Consensus 237 ~~l~~spd~~~l~s~s~--d~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~g~i~~~~ 309 (609)
..++|+|||++|+++.. ++.|.+|++... .++ ....+.. + ... ..+.++ +.++++++ .++.+.+|.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g~~~~~~~~~~-g-~~~----~~~~~spdg~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDET-NGTLTKVGYQLT-G-IHP----RNFIITPNGKYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTT-TCCEEEEEEEEC-S-SCC----CEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CCcEEEeeEecC-C-CCC----ceEEECCCCCEEEEEECCCCCEEEEE
Confidence 89999999998876665 489999998622 122 2333322 1 111 123343 55677776 568899987
Q ss_pred CCCCCCCceee--eCCCCCeEEEEEe
Q 007283 310 ANDLEKSPLQL--SGHMKNVTALTVL 333 (609)
Q Consensus 310 ~~~~~~~~~~~--~~h~~~v~~~~~~ 333 (609)
++........+ ..+...+.++.|.
T Consensus 335 ~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 335 RDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EECCCCcEeecceeeeCCCCeEEEEc
Confidence 76433332222 1234456666653
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=5.9e-17 Score=160.54 Aligned_cols=239 Identities=13% Similarity=0.102 Sum_probs=165.9
Q ss_pred EeecCCCCeEEEe-CCCEEEEEeCCCCccccccccCC-CCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEee
Q 007283 22 ISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYGEHA-YPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRV 98 (609)
Q Consensus 22 ~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~-~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~ 98 (609)
+++++++..++.. ..+.+.+||+.+++....+..+. ..+..++|+|+|++++ +...+++|.+||..+++... .+..
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~-~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF-HANL 83 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEES
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE-EEEc
Confidence 4566666666654 45899999999887766565433 2578999999998664 56678999999998876433 2322
Q ss_pred c------ccceeEEEECCCCCEEEEEECC---------CCcceEEEEEcCCC---CeeEEEecCCccEEEEEEeeCCCeE
Q 007283 99 L------SGRIDDLQWSPDGLRIVACGDG---------KGKSLVRAFMWDSG---TNVGEFDGHSRRVLSCAFKPSRPFR 160 (609)
Q Consensus 99 ~------~~~v~~~~~spdg~~l~~~~~~---------~~~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (609)
. ...+..++|+|||++|++.+.+ .....+.+|+.+++ ..+..+.. ...+.+++|+|++. +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-E
Confidence 1 2237889999999999987732 00124556665553 22333433 34688899999998 4
Q ss_pred EEEecCCCeEEEEeCCCCceeeeccCcc----------------------------------------------------
Q 007283 161 IATCGEDFLVNFYEGPPFKFKLSHRGHS---------------------------------------------------- 188 (609)
Q Consensus 161 i~t~~~d~~i~~~~~~~~~~~~~~~~h~---------------------------------------------------- 188 (609)
++ ++.+ +.+||..+++....+..+.
T Consensus 162 ~~-~~~~--i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 162 YV-AGPD--IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EE-ESSS--EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EE-ccCc--EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 55 4444 8899987766544332111
Q ss_pred ----------------cceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 189 ----------------NFVNCVRFSP-DGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 189 ----------------~~v~~l~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
..+..++|+| ||++++++ ++.+.+||..+++.+..+. ....+.+++|+||+++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN----LDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE----CSSCCCEEEECSSSSCEEEE
T ss_pred eccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc----CCCCccceEECCCCCEEEEe
Confidence 1345678889 99988877 8899999999888766553 22347799999999999988
Q ss_pred eCCCcEEEeecccCCCCceEEEec
Q 007283 252 SADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 252 s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
+.++.|++||+. .++....+.
T Consensus 313 ~~~~~v~v~d~~---~~~~~~~~~ 333 (349)
T 1jmx_B 313 GTFNDLAVFNPD---TLEKVKNIK 333 (349)
T ss_dssp SBSSEEEEEETT---TTEEEEEEE
T ss_pred cCCCeEEEEecc---ccceeeeee
Confidence 889999999986 344555443
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=1.7e-17 Score=165.73 Aligned_cols=243 Identities=9% Similarity=0.014 Sum_probs=163.5
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCC-CCccccccccCC--CCcEEEEECCCCCE--EEEEe-------------CCC
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLS-NPLQVSIYGEHA--YPATVARFSPNGEW--IASAD-------------VSG 79 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~-~~~~~~~~~~h~--~~v~~~~~sp~g~~--las~~-------------~d~ 79 (609)
.+..++++|||+.|+..+...+.+|++. +++...... |. +...+++|+|||++ +++++ .++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~-~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEAS-HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEE-EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeE-eecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 5678999999998876654489999996 665433222 11 23566899999994 55664 689
Q ss_pred cEEEEcCCC-CceeeEEEee----cccceeEEEECCCCCEEEEEECCCCcceEEEEEcC-CCCee--EEEe--cCCccEE
Q 007283 80 TVRIWGAHN-DHVLKKEFRV----LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD-SGTNV--GEFD--GHSRRVL 149 (609)
Q Consensus 80 ~i~vWd~~~-~~~~~~~~~~----~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~--~h~~~v~ 149 (609)
++++|++.. ++. ...+.. +...+..++|+|||++|+++..+. ..+++|+.+ .++.. ..+. .|...+.
T Consensus 120 ~v~v~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~--~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 120 YGNVFSVSETGKL-EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA--NKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp EEEEEEECTTCCE-EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT--TEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred eEEEEccCCCCcC-cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC--CEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 999999974 332 222222 345789999999999888765433 246677776 45432 3333 2456789
Q ss_pred EEEEeeCCCeEEEEecCCCeEEEEeCC--CCceee------ec----cCccc------ceEEEE-EcCCCCEEEEEeCCC
Q 007283 150 SCAFKPSRPFRIATCGEDFLVNFYEGP--PFKFKL------SH----RGHSN------FVNCVR-FSPDGSKFISVSSDK 210 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~~i~~~~~~--~~~~~~------~~----~~h~~------~v~~l~-~s~dg~~l~s~~~d~ 210 (609)
.++|+|++..++++...++.+.+|+.. +++... .+ .+|.. .+..++ |+|||++|+++..+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 999999998755555567889998643 444321 12 12332 588999 999999887765432
Q ss_pred ------cEEEEeCC-CCccccccCcCCCCccceEEEEECC---CCCeEEEEeCC-CcEEEeeccc
Q 007283 211 ------KGIIYDGK-TADKIGELSPEDGHKGSVYAVSWSP---DGKQVLTASAD-KSAKVWDISE 264 (609)
Q Consensus 211 ------~i~iwd~~-~~~~~~~~~~~~~h~~~V~~l~~sp---d~~~l~s~s~d-~~i~iwd~~~ 264 (609)
.+.+|++. +++..........+...+..++|+| ||++|++++.+ ++|++|+++.
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 79999985 4543221100112334466789999 89999998865 8999999863
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.76 E-value=4.6e-17 Score=165.74 Aligned_cols=159 Identities=18% Similarity=0.234 Sum_probs=122.8
Q ss_pred cCCceeEEEEcCCCCEEE----EEeCCCcEEEEEecCC-----e----eeeeEEEecCCCceEEEEECCC-CCEEEEEeC
Q 007283 446 LRFPVTASAIAPDGSEAI----IGSQDGKLRVYSIRGD-----T----LTEEAVLEKHRGAVSVIRYSPD-VSMFASGDV 511 (609)
Q Consensus 446 ~~~~~~~~~~sp~g~~l~----~gs~dg~i~iw~~~~~-----~----~~~~~~~~~h~~~i~~v~~s~~-~~~l~s~s~ 511 (609)
+..++.+++++|+|+++| +|+.|+.|++||+.+. . +.....+.+|.+.|.+++|+|+ +.++++++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 445799999999999999 7889999999998653 1 1123456779999999999998 899999999
Q ss_pred CCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEe------ccccCCeEEEE
Q 007283 512 NREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIK------GAHLGGVYGLA 585 (609)
Q Consensus 512 d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~------~~h~~~v~~~~ 585 (609)
|+++++||+.+.... .....|...|++++|+|+|++|++|+.||+|++||+. .. ....+. ..|...|.+++
T Consensus 171 Dg~v~iwD~~~~~~~-~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 171 DGSIAVLQVTETVKV-CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp TSCEEEEEESSSEEE-EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEEEEE
T ss_pred CCeEEEEEcCCCcce-eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEEEEE
Confidence 999999999876443 3345688999999999999999999999999999986 22 111111 12344799999
Q ss_pred EcC-CCeEEE-EeCCCc------EEEEEcc
Q 007283 586 FTD-EHSVVS-SGEDAC------VRVWRLT 607 (609)
Q Consensus 586 ~s~-~~~l~s-~s~D~~------i~~W~~~ 607 (609)
|+. ..++++ .+.||. +++|++.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEec
Confidence 994 444443 444533 8999985
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=1.2e-16 Score=175.01 Aligned_cols=239 Identities=10% Similarity=0.096 Sum_probs=162.1
Q ss_pred cCceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCC---c--EEEEECCCCCEEEEEeCC---------CcE
Q 007283 16 RGRGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYP---A--TVARFSPNGEWIASADVS---------GTV 81 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~---v--~~~~~sp~g~~las~~~d---------~~i 81 (609)
++....+.++|||++++.. ++.+.+|++.+++....+.+|... + ..++|||||++||.++.+ +.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 3445589999999877776 779999999998877777777643 2 337889999999988876 456
Q ss_pred EEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeE-EEecCCccE------------
Q 007283 82 RIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG-EFDGHSRRV------------ 148 (609)
Q Consensus 82 ~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v------------ 148 (609)
.+||+.+++.. .+..+.+.+..++|||||++|+.+.++ .+.+++.+.+.... +..++...+
T Consensus 95 ~~~d~~~~~~~--~l~~~~~~~~~~~~SPdG~~la~~~~~----~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 95 DIYDLNKRQLI--TEERIPNNTQWVTWSPVGHKLAYVWNN----DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEETTTTEEC--CSSCCCTTEEEEEECSSTTCEEEEETT----EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred EEEECCCCcEE--EcccCCCcceeeEECCCCCEEEEEECC----eEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 69999987642 355667789999999999999998753 23444433443222 122333222
Q ss_pred -----EEEEEeeCCCeEEEEecCC------------------------------------CeEEEEeCCC---C---cee
Q 007283 149 -----LSCAFKPSRPFRIATCGED------------------------------------FLVNFYEGPP---F---KFK 181 (609)
Q Consensus 149 -----~~~~~~p~~~~~i~t~~~d------------------------------------~~i~~~~~~~---~---~~~ 181 (609)
..+.|+|||.. ||..+.| ..+.+||... + +..
T Consensus 169 ~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~ 247 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSI 247 (740)
T ss_dssp TSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEE
T ss_pred hcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEE
Confidence 24899999986 5544211 1467788776 5 222
Q ss_pred eecc-----CcccceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCc----cc--cccCcCCCCccceE-----EEEE
Q 007283 182 LSHR-----GHSNFVNCVRFSPDGSKFISVSS----DKKGIIYDGKTAD----KI--GELSPEDGHKGSVY-----AVSW 241 (609)
Q Consensus 182 ~~~~-----~h~~~v~~l~~s~dg~~l~s~~~----d~~i~iwd~~~~~----~~--~~~~~~~~h~~~V~-----~l~~ 241 (609)
.... +|...+..++|+|||+.++.... +..|.+||..+++ +. ..+. ..+|.+.|. .+.|
T Consensus 248 ~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~-~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI-EMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE-EECSSSCSSSSSCCCCEE
T ss_pred EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee-eccCCceEccCcCCCceE
Confidence 2211 47888999999999997665532 3478999988876 22 2111 124555444 7899
Q ss_pred CCCCCeEE-EEeC-C--CcEEEeecc
Q 007283 242 SPDGKQVL-TASA-D--KSAKVWDIS 263 (609)
Q Consensus 242 spd~~~l~-s~s~-d--~~i~iwd~~ 263 (609)
+|||+.|+ ..+. + .+|++||+.
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECC
Confidence 99999877 6653 3 467778875
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.7e-16 Score=171.88 Aligned_cols=203 Identities=13% Similarity=0.144 Sum_probs=144.8
Q ss_pred ccccccCCCCcEEEEECCCCCEEEEE--eCCCcEEEEcCCCCceeeEEEeeccccee---------EEEEC--CCCCE-E
Q 007283 50 VSIYGEHAYPATVARFSPNGEWIASA--DVSGTVRIWGAHNDHVLKKEFRVLSGRID---------DLQWS--PDGLR-I 115 (609)
Q Consensus 50 ~~~~~~h~~~v~~~~~sp~g~~las~--~~d~~i~vWd~~~~~~~~~~~~~~~~~v~---------~~~~s--pdg~~-l 115 (609)
...+.+|...+..++|++++-++++. +.+++.+||....+. ....+..+...+. ..+|+ |||++ |
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADG-AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTS-CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCC-CcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 34567899999999999998888877 668899999864333 2334555555555 56665 99999 7
Q ss_pred EEEECCCCcceEEEEEcCCC----CeeEEEec-----CCccEEEEEEeeCCCeEEEEecCC----------CeEEEEeCC
Q 007283 116 VACGDGKGKSLVRAFMWDSG----TNVGEFDG-----HSRRVLSCAFKPSRPFRIATCGED----------FLVNFYEGP 176 (609)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----h~~~v~~~~~~p~~~~~i~t~~~d----------~~i~~~~~~ 176 (609)
+.+.+.. .++|.++.. .....+.. |...+..++|+|++.. |+.++.+ ..+.+|+..
T Consensus 95 a~~~~~~----~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i~~~~~~ 169 (662)
T 3azo_A 95 VFTHFGD----QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFLAAVPLD 169 (662)
T ss_dssp EEEBTTT----CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEEEEEETT
T ss_pred EEEECCC----CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEEEEEECC
Confidence 7766542 346777754 55556665 6778999999999986 6555555 478889877
Q ss_pred C------Cceeeecc-CcccceEEEEEcCCCCEEEEEeCC--------CcEEEEeCC-CCc--cccccCcCCCCccceEE
Q 007283 177 P------FKFKLSHR-GHSNFVNCVRFSPDGSKFISVSSD--------KKGIIYDGK-TAD--KIGELSPEDGHKGSVYA 238 (609)
Q Consensus 177 ~------~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~d--------~~i~iwd~~-~~~--~~~~~~~~~~h~~~V~~ 238 (609)
. ++.. .+. .+...+..++|||||++|+.++.+ ..+.+||.. +++ ....+. .+|...+..
T Consensus 170 ~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~--~~~~~~~~~ 246 (662)
T 3azo_A 170 GSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL--GGPEEAIAQ 246 (662)
T ss_dssp STTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE--EETTBCEEE
T ss_pred CCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC--CCCCceEcc
Confidence 6 4443 333 455678889999999999988755 379999988 451 222332 245678999
Q ss_pred EEECCCCCeEEEEeCCCcEEEee
Q 007283 239 VSWSPDGKQVLTASADKSAKVWD 261 (609)
Q Consensus 239 l~~spd~~~l~s~s~d~~i~iwd 261 (609)
+.|+|||++++++..++..++|.
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHR 269 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEE
T ss_pred eEECCCCeEEEEECCCCCeEEEE
Confidence 99999999888887788545544
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=3.2e-16 Score=157.83 Aligned_cols=163 Identities=10% Similarity=0.042 Sum_probs=107.9
Q ss_pred cCCCCceeeEEEeecccceeE-----EEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCe
Q 007283 85 GAHNDHVLKKEFRVLSGRIDD-----LQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPF 159 (609)
Q Consensus 85 d~~~~~~~~~~~~~~~~~v~~-----~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (609)
|..++.. ...++.+...... .+|||||++|+.+++..+...+.+++.+.+.......++...+....|+|++..
T Consensus 16 ~~~~g~~-~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 16 DASTGAQ-VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp CTTTCCE-EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred cCCCCcc-eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 4444432 2345555544444 889999999999886433323333344444444444455555556789999985
Q ss_pred EEEEecCCCeEEEEeCCCCceeeeccCcccceEEE--EEcCCCCEEEEEe----------------------CCCcEEEE
Q 007283 160 RIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCV--RFSPDGSKFISVS----------------------SDKKGIIY 215 (609)
Q Consensus 160 ~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l--~~s~dg~~l~s~~----------------------~d~~i~iw 215 (609)
|+.++.+..+.+||..+++....+..+...+... .++|+|++++... .+..+.+|
T Consensus 95 -l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 95 -LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp -EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred -EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 7777788899999998887665555555545433 3489999877432 34678889
Q ss_pred eCCCCccccccCcCCCCccceEEEEECC-CCCeEEEEeC
Q 007283 216 DGKTADKIGELSPEDGHKGSVYAVSWSP-DGKQVLTASA 253 (609)
Q Consensus 216 d~~~~~~~~~~~~~~~h~~~V~~l~~sp-d~~~l~s~s~ 253 (609)
|..+++..... .+...+..+.|+| ||+.|+..+.
T Consensus 174 d~~~g~~~~l~----~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 174 DLKTGESTVIL----QENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp ETTTCCEEEEE----EESSCEEEEEEETTEEEEEEEEEC
T ss_pred ECCCCceEEee----cCCccccccEECCCCCCEEEEEEe
Confidence 98887643222 3456688999999 9988887764
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=2e-15 Score=148.14 Aligned_cols=245 Identities=15% Similarity=0.168 Sum_probs=177.2
Q ss_pred cCceeEEeecCCCCeEEEeCCC-------------------------EEEEEeCCCCccccccc-cCCCCcEEEEECCCC
Q 007283 16 RGRGILISGHPKSNSILYTNGR-------------------------SVIILDLSNPLQVSIYG-EHAYPATVARFSPNG 69 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~-------------------------~~~i~~~~~~~~~~~~~-~h~~~v~~~~~sp~g 69 (609)
-+.+..++++|+|+.++...++ .+++||..+++....+. ++-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 5678899999999988877554 69999998877765554 444578999999999
Q ss_pred CEEEEEeCCCcEEEEcCCCCceeeEEEe---------ecccceeEEEECC-CCCEEEEEECCCCcceEEEEEcCCCCeeE
Q 007283 70 EWIASADVSGTVRIWGAHNDHVLKKEFR---------VLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRAFMWDSGTNVG 139 (609)
Q Consensus 70 ~~las~~~d~~i~vWd~~~~~~~~~~~~---------~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (609)
+++++...++.|++|+..........+. .+......++|+| +|..+++-+.+. ..++.++ ..+..+.
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~--~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN--SRIVQFS-PSGKFVT 179 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC--CEEEEEC-TTSCEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC--CeEEEEc-CCCCEEE
Confidence 9999988899999999865421222331 2223578999999 777766643112 2333443 2344455
Q ss_pred EEec----------CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeec--cCcccceEEEEEcC------CCC
Q 007283 140 EFDG----------HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSH--RGHSNFVNCVRFSP------DGS 201 (609)
Q Consensus 140 ~~~~----------h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~l~~s~------dg~ 201 (609)
.+.. +......++++|++..++++...++.|++|+..+++....+ .++...+..++|+| +|+
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 4432 22348899999995566888888899999998877766655 34667788999999 333
Q ss_pred EEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 202 KFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 202 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.+++...+..+++|+..+++.+..+....++.....+++++|+|.++++...+++|++|++.
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 22223345589999999998877764334566778999999999888899999999999975
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.6e-15 Score=151.33 Aligned_cols=250 Identities=12% Similarity=0.121 Sum_probs=157.4
Q ss_pred CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCC-CCceeeEEEee-cccceeEEEECCCCCE-EEEEEC-------CC---
Q 007283 56 HAYPATVARFSPNGEWIASADVSGTVRIWGAH-NDHVLKKEFRV-LSGRIDDLQWSPDGLR-IVACGD-------GK--- 122 (609)
Q Consensus 56 h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~-~~~~~~~~~~~-~~~~v~~~~~spdg~~-l~~~~~-------~~--- 122 (609)
+..++..++|+|||++|++++.+ +|++|++. +++... .... ..+.+..++|+|||++ ++.+.+ +.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 33468899999999999988887 99999987 554322 1121 1134567999999986 333332 10
Q ss_pred -CcceEEEEEcCC-CCeeEEEe----cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCC-CCceee--ecc--Ccccce
Q 007283 123 -GKSLVRAFMWDS-GTNVGEFD----GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGP-PFKFKL--SHR--GHSNFV 191 (609)
Q Consensus 123 -~~~~~~~~~~~~-~~~~~~~~----~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~-~~~~~~--~~~--~h~~~v 191 (609)
....+++|..+. +.....+. .+...+..++|+|++..++++...+..|.+|+.. +++... .+. .|...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 122456777663 44333332 2456789999999998655554456789999987 555432 222 245668
Q ss_pred EEEEEcCCCCEEEEEeC-CCcEEEEeCC--CCccc------cccCc-CCCCcc------ceEEEE-ECCCCCeEEEEeCC
Q 007283 192 NCVRFSPDGSKFISVSS-DKKGIIYDGK--TADKI------GELSP-EDGHKG------SVYAVS-WSPDGKQVLTASAD 254 (609)
Q Consensus 192 ~~l~~s~dg~~l~s~~~-d~~i~iwd~~--~~~~~------~~~~~-~~~h~~------~V~~l~-~spd~~~l~s~s~d 254 (609)
..++|+|||++|++++. ++.+.+|+.. +++.. ..+.. ..+|.. .+..++ |+|||++|+++..+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 99999999998887775 6889998754 45431 11211 012333 588999 99999988776543
Q ss_pred -C-----cEEEeecccCCCCceEEE---eccCCCCCccceEEEEEE---cCCeEEEEEcC-CcEEEEeCCC
Q 007283 255 -K-----SAKVWDISEDNHGKLKKT---LTPSGSGGVDDMLVGCLW---QNDFLVIVSLG-GTISIFSAND 312 (609)
Q Consensus 255 -~-----~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-g~i~~~~~~~ 312 (609)
. +|++|++.. .+++... ..... ..... +.+.. ++++++++..+ +.+.+|+.+.
T Consensus 276 ~~~~~~~~i~v~~~~~--~g~~~~~~~~~~~~~-~~~~~--~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 276 NKFELQGYIAGFKLRD--CGSIEKQLFLSPTPT-SGGHS--NAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp SSTTSCCEEEEEEECT--TSCEEEEEEEEECSS-CCTTC--CCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCeEEEEEECC--CCCEEEeeeeeecCC-CCccc--ceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 2 899999863 2333321 21111 11111 22333 46777777664 8899998653
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=5.7e-15 Score=148.69 Aligned_cols=299 Identities=10% Similarity=0.022 Sum_probs=181.3
Q ss_pred EEeCCCCccccccccCCCCcEE-----EEECCCCCEEEEEeC-CCc--EEEEcCCCCceeeEEEeecccceeEEEECCCC
Q 007283 41 ILDLSNPLQVSIYGEHAYPATV-----ARFSPNGEWIASADV-SGT--VRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDG 112 (609)
Q Consensus 41 i~~~~~~~~~~~~~~h~~~v~~-----~~~sp~g~~las~~~-d~~--i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg 112 (609)
..+..++.....+..|...... ++|||||++||.++. ++. |.+||..+++.. .....+...+..++|||||
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT-QLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE-ECCCSSCBCSSSCEECTTS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE-EeeeCCCCCccceEEcCCC
Confidence 3455566666667777766665 889999999998876 675 677787776532 2223334445578999999
Q ss_pred CEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEE--EeeCCCeEEEE---------------------ecCCCe
Q 007283 113 LRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCA--FKPSRPFRIAT---------------------CGEDFL 169 (609)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~p~~~~~i~t---------------------~~~d~~ 169 (609)
++|+.+..+. .+.+++.+++.....+..+...+.... ++|++..+++. .+.+..
T Consensus 93 ~~l~~~~~~~---~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (388)
T 3pe7_A 93 DALFYVKDGR---NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCR 169 (388)
T ss_dssp SEEEEEETTT---EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEE
T ss_pred CEEEEEeCCC---eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcce
Confidence 9999988543 455666667666555666666554444 47888753321 234467
Q ss_pred EEEEeCCCCceeeeccCcccceEEEEEcC-CCCEEEEEeCC------CcEEEEeCCCCccccccCcCCCCc-cceEEEEE
Q 007283 170 VNFYEGPPFKFKLSHRGHSNFVNCVRFSP-DGSKFISVSSD------KKGIIYDGKTADKIGELSPEDGHK-GSVYAVSW 241 (609)
Q Consensus 170 i~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~h~-~~V~~l~~ 241 (609)
+.+||..+++... +..+...+..+.|+| ||+.|+.+..+ ..+.++|...++. ..+.. .+. ..+..+.|
T Consensus 170 l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~--~~~~~~~~~~~~ 245 (388)
T 3pe7_A 170 LMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKT--HAEGESCTHEFW 245 (388)
T ss_dssp EEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCC--CCTTEEEEEEEE
T ss_pred EEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeee--CCCCcccccceE
Confidence 8889988775543 334566789999999 99999887764 3677888765443 23321 222 35888999
Q ss_pred CCCCCeEEEEeCC-----CcEEEeecccCCCCceEEEeccCCC----CCccceEEEEEEcCCeEEEE---------EcCC
Q 007283 242 SPDGKQVLTASAD-----KSAKVWDISEDNHGKLKKTLTPSGS----GGVDDMLVGCLWQNDFLVIV---------SLGG 303 (609)
Q Consensus 242 spd~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---------~~~g 303 (609)
+|||+.|+..+.+ ..|++||+... +.......... ...... .+..++..++.. ..+.
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g---~~~~l~~~~~~~~~~~~~~~~--~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETL---ENRQLTSMPACSHLMSNYDGS--LMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTC---CEEEEEEECCEEEEEECTTSS--EEEEEECCC------------CCCC
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCC---ceEEEEcCCCceeeeecCCCC--eEccCCCcceeEeeeccccccCCCC
Confidence 9999988665532 23999998743 22211111110 000001 122334444432 3355
Q ss_pred cEEEEeCCCCCCCceeeeCCCC-----------CeEEEEEecCCCCEEEEEecCCcEEEEec
Q 007283 304 TISIFSANDLEKSPLQLSGHMK-----------NVTALTVLNIDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~t~s~dg~i~~W~~ 354 (609)
.|++|+.... ....+..|.. .+..++|++....+++++..++...+|..
T Consensus 321 ~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 321 FLYVFNMKNG--TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEEEEETTTT--EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEEEEeccCC--ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 7888887643 2334555554 46667776543344555556788777754
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=7.1e-15 Score=160.89 Aligned_cols=203 Identities=11% Similarity=0.100 Sum_probs=137.1
Q ss_pred CCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccc---e--eEEEECCCCCEEEEEECCCCc----ceE
Q 007283 57 AYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGR---I--DDLQWSPDGLRIVACGDGKGK----SLV 127 (609)
Q Consensus 57 ~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~---v--~~~~~spdg~~l~~~~~~~~~----~~~ 127 (609)
......++|+|||++|+++ |++|++||+.+++.. ..+..+... + ..++|||||++|+...+.... ...
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceE-EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3446688999999999997 999999999987643 334444322 2 348999999999987753211 012
Q ss_pred EEEEcC--CCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee-eccCcccce-------------
Q 007283 128 RAFMWD--SGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL-SHRGHSNFV------------- 191 (609)
Q Consensus 128 ~~~~~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~-~~~~h~~~v------------- 191 (609)
.++.|+ ++. ...+..|...+...+|||||.. ||.+ .++.|.+|+...++..+ +..++...+
T Consensus 93 ~~~~~d~~~~~-~~~l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 93 SYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEEEECCCCc-EEEcccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 344555 443 3346677788999999999986 5555 46789999987665433 233443322
Q ss_pred ----EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEeCCC---Ccc--cccc
Q 007283 192 ----NCVRFSPDGSKFISVSSDK------------------------------------KGIIYDGKT---ADK--IGEL 226 (609)
Q Consensus 192 ----~~l~~s~dg~~l~s~~~d~------------------------------------~i~iwd~~~---~~~--~~~~ 226 (609)
..+.|||||+.||.++.|. .+.+||..+ ++. ...+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 3489999999999886332 477788887 631 1122
Q ss_pred CcC---CCCccceEEEEECCCCCeEEEEeC----CCcEEEeecccC
Q 007283 227 SPE---DGHKGSVYAVSWSPDGKQVLTASA----DKSAKVWDISED 265 (609)
Q Consensus 227 ~~~---~~h~~~V~~l~~spd~~~l~s~s~----d~~i~iwd~~~~ 265 (609)
... .+|...+..++|+|||+.++.... +..|++||+..+
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg 295 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES 295 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCC
Confidence 110 137778999999999997665533 347999998753
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=8.9e-15 Score=158.40 Aligned_cols=337 Identities=12% Similarity=0.034 Sum_probs=190.5
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEe--cCCCeEEEEeCCCCceeeeccCcccceE---------EEEEc--CCCCE-E
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATC--GEDFLVNFYEGPPFKFKLSHRGHSNFVN---------CVRFS--PDGSK-F 203 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~--~~d~~i~~~~~~~~~~~~~~~~h~~~v~---------~l~~s--~dg~~-l 203 (609)
...+.+|...+..++|+++. ..++.. +.++...+|..........+..|...+. ...|+ |||+. |
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDE-VWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTE-EEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHHhhcCCccceeEEcCCe-EEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 34466888999999999875 346666 6678888887433333444555555544 55555 99998 7
Q ss_pred EEEeC-CCcEEEEeCC--C-CccccccCcCC--CCccceEEEEECCCCCeEEEEeCC----------CcEEEeecccCCC
Q 007283 204 ISVSS-DKKGIIYDGK--T-ADKIGELSPED--GHKGSVYAVSWSPDGKQVLTASAD----------KSAKVWDISEDNH 267 (609)
Q Consensus 204 ~s~~~-d~~i~iwd~~--~-~~~~~~~~~~~--~h~~~V~~l~~spd~~~l~s~s~d----------~~i~iwd~~~~~~ 267 (609)
+.++. +..|.+++.. . ++ ...+.... .|...+.+++|+|||+.|++++.| .+|++||+.....
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 77664 5567777655 2 33 33332110 166788999999999999998876 4677777642000
Q ss_pred ---CceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeee-CCCCCeEEEEEecCCCCEEEEE
Q 007283 268 ---GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLS-GHMKNVTALTVLNIDPKVILSS 343 (609)
Q Consensus 268 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~t~ 343 (609)
+.. ..+. .+...+..+.+++ +++.|+.+
T Consensus 174 ~~~~~~-----------------------------------------------~~l~~~~~~~~~~~~~Sp-DG~~la~~ 205 (662)
T 3azo_A 174 ADRSAV-----------------------------------------------RELSDDAHRFVTGPRLSP-DGRQAVWL 205 (662)
T ss_dssp TCGGGS-----------------------------------------------EESSCSCSSEECCCEECT-TSSEEEEE
T ss_pred ccCCce-----------------------------------------------eEEEecCCCcccCceECC-CCCEEEEE
Confidence 111 1111 2223334445543 45666665
Q ss_pred ecCC--------cEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeE
Q 007283 344 SYDG--------LIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLS 415 (609)
Q Consensus 344 s~dg--------~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (609)
+.++ .|.+|+... .+...
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~---------------------------------------~g~~~--------------- 231 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTE---------------------------------------DGRFA--------------- 231 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECT---------------------------------------TSCEE---------------
T ss_pred ECCCCCCCCCCcEEEEEEECC---------------------------------------CCccc---------------
Confidence 5443 344443220 00000
Q ss_pred eeccCCcEEEEEecccEEEeeCCeeeEEe-ccCCceeEEEEcCCCCEEEEEeCCCcEEEEEec--CCeeeeeEEEecCCC
Q 007283 416 VALHYPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIR--GDTLTEEAVLEKHRG 492 (609)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~--~~~~~~~~~~~~h~~ 492 (609)
+..... .....+..++++|||+++++++.|+..+||.++ ++... .....+..
T Consensus 232 -----------------------~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~--~l~~~~~~ 286 (662)
T 3azo_A 232 -----------------------DTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT--QLCRREEE 286 (662)
T ss_dssp -----------------------EEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE--ESSCCSSB
T ss_pred -----------------------ccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCcee--eccccccc
Confidence 000000 011235678899999988888888855555543 44332 22222322
Q ss_pred c--------eEEEEECCCCCEEEEEeCCCeEEEE--EccCCceEEeeecCCCCceEEE-EECCCCcEEEEEeCCCeEEEE
Q 007283 493 A--------VSVIRYSPDVSMFASGDVNREAIVW--DRVSREVKLKNMLYHTARINCL-AWSPNNSMVATGSLDTCVIIY 561 (609)
Q Consensus 493 ~--------i~~v~~s~~~~~l~s~s~d~~v~iw--d~~~~~~~~~~~~~h~~~i~~l-~~s~d~~~l~s~s~D~~v~vw 561 (609)
. +..++|+|+++++++++. ++.++| |..+++ .+.+..|...+..+ +++++.-.+++++.+....+|
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE--LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE--EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc--EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 2 567899999999999998 999999 544443 34566677778877 665554556667777777777
Q ss_pred EcCCCCCcceeEeccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEc
Q 007283 562 EIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRL 606 (609)
Q Consensus 562 ~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~ 606 (609)
.++........+...|...+....++ .+...+.+..+..+..|-+
T Consensus 364 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~~ 409 (662)
T 3azo_A 364 ELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIY 409 (662)
T ss_dssp EEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEEE
Confidence 65432212233334444433333333 2222333333345555543
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.67 E-value=5.9e-14 Score=139.26 Aligned_cols=292 Identities=16% Similarity=0.116 Sum_probs=177.9
Q ss_pred CCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCccccccCcCCC---C
Q 007283 166 EDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSS----------DKKGIIYDGKTADKIGELSPEDG---H 232 (609)
Q Consensus 166 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~---h 232 (609)
.|+.+.+||..+++....+..+..+ .++|+|||+++.++.. ++.|.+||..+.+.+..+..... +
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4678999998888877666665555 8999999999888762 56799999988877665532111 2
Q ss_pred ccceEEEEECCCCCeEEEEeC--CCcEEEeecccCCCCceEEE-eccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEe
Q 007283 233 KGSVYAVSWSPDGKQVLTASA--DKSAKVWDISEDNHGKLKKT-LTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFS 309 (609)
Q Consensus 233 ~~~V~~l~~spd~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (609)
......++|+|||++|+++.. +++|.+||+.. ++.... +...+
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~---~~~~~~~i~~~~------------------------------- 152 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK---GDYVEDVTAAAG------------------------------- 152 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT---TEEEEEEGGGTT-------------------------------
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCC---CcEEEEEecCCC-------------------------------
Confidence 234567999999999988864 58999999863 333333 21100
Q ss_pred CCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceE
Q 007283 310 ANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKI 389 (609)
Q Consensus 310 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 389 (609)
...+.+.+..+..+++.+.||.+..|....... +. .... ..
T Consensus 153 -----------------~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~----------~~---------~~~~---~~ 193 (361)
T 2oiz_A 153 -----------------CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK----------VA---------SQSR---SK 193 (361)
T ss_dssp -----------------EEEEEECTTSSSEEEEEETTSSEEEEEECTTSS----------EE---------EEEE---CC
T ss_pred -----------------cceeEEcCCCCeeEEEECCCCcEEEEEECCCCc----------Ee---------eecc---cc
Confidence 001122222335677788888888775432100 00 0000 00
Q ss_pred EEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCCC
Q 007283 390 WRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDG 469 (609)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~dg 469 (609)
..++. . ..+ ..+..+|++..++..+.++
T Consensus 194 ~~~~~-------------~--------------------------------------~~~-~~~~~~~~g~~~~~~~~~~ 221 (361)
T 2oiz_A 194 QMFSV-------------K--------------------------------------DDP-IFIAPALDKDKAHFVSYYG 221 (361)
T ss_dssp CCSCT-------------T--------------------------------------TSC-BCSCCEECSSEEEEEBTTS
T ss_pred ceEcC-------------C--------------------------------------CCc-eEEEecccCCEEEEEeCCC
Confidence 00000 0 000 0111245666677777888
Q ss_pred cEEEEEecCCeeeeeEEEec------CC----CceEEEEECCCCCEEEEEeC-----------CCeEEEEEccCCceEEe
Q 007283 470 KLRVYSIRGDTLTEEAVLEK------HR----GAVSVIRYSPDVSMFASGDV-----------NREAIVWDRVSREVKLK 528 (609)
Q Consensus 470 ~i~iw~~~~~~~~~~~~~~~------h~----~~i~~v~~s~~~~~l~s~s~-----------d~~v~iwd~~~~~~~~~ 528 (609)
.|+++|+..+.........- +. .....++|+||+..+.++.. ..++.+||+.+.+. ++
T Consensus 222 ~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-v~ 300 (361)
T 2oiz_A 222 NVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-VA 300 (361)
T ss_dssp EEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-EE
T ss_pred eEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-EE
Confidence 89999886543221111110 01 11112689999877666543 35899999887764 34
Q ss_pred eecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEcC
Q 007283 529 NMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTD 588 (609)
Q Consensus 529 ~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~ 588 (609)
.+..+. +.+++|+|||++|++++. ++|.+||..+...+.+.....+...-..++|++
T Consensus 301 ~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 301 RIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp EEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred EEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 455555 999999999999998887 999999987652122333234555667788883
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=5.8e-15 Score=148.95 Aligned_cols=236 Identities=11% Similarity=0.007 Sum_probs=147.7
Q ss_pred eeEEeecCCCCeEEEeCC----CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeE
Q 007283 19 GILISGHPKSNSILYTNG----RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKK 94 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~----~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~ 94 (609)
...++++|||+.|++... ..+.++++.+++......++......++|||||++||.++.++.|.+|++.+++.. .
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~-~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ-V 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE-E
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE-E
Confidence 346789999999988732 37889999887765443333333444789999999999999999999999876532 2
Q ss_pred EEeecccceeE-------------------EEECCCCCEEEEEE--CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEE
Q 007283 95 EFRVLSGRIDD-------------------LQWSPDGLRIVACG--DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAF 153 (609)
Q Consensus 95 ~~~~~~~~v~~-------------------~~~spdg~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 153 (609)
....+...... ++|+||++.++... .......+.+++.+.+... .+..+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELE-VIHQDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEE-EEEEESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEE-eeccCCcccccceE
Confidence 22222221111 35677777655432 0112223344444444433 33356677899999
Q ss_pred ee-CCCeEEEEecCC------CeEEEEeCCCCceeeeccCc-ccceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCC
Q 007283 154 KP-SRPFRIATCGED------FLVNFYEGPPFKFKLSHRGH-SNFVNCVRFSPDGSKFISVSSD-----KKGIIYDGKTA 220 (609)
Q Consensus 154 ~p-~~~~~i~t~~~d------~~i~~~~~~~~~~~~~~~~h-~~~v~~l~~s~dg~~l~s~~~d-----~~i~iwd~~~~ 220 (609)
+| ++.. ++..+.+ ..+.+|+....+........ ...+..+.|+|||+.|+.++.+ +.+.+||..++
T Consensus 196 sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 196 RPFDDST-VGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp ETTEEEE-EEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCCE-EEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 99 6653 4333222 35777776554433323322 3358889999999988777644 44999998877
Q ss_pred ccccccCcCCCCccceEEEEECC-CCCeEEEEeC----------------CCcEEEeecc
Q 007283 221 DKIGELSPEDGHKGSVYAVSWSP-DGKQVLTASA----------------DKSAKVWDIS 263 (609)
Q Consensus 221 ~~~~~~~~~~~h~~~V~~l~~sp-d~~~l~s~s~----------------d~~i~iwd~~ 263 (609)
+... +....+ .. +.|+| ||++++.++. +..|++||+.
T Consensus 275 ~~~~-l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 275 ENEE-VMVMPP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp CEEE-EEECCS----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CeEE-eeeCCC----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 6432 211111 23 89999 9998887652 3678888875
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.3e-13 Score=136.34 Aligned_cols=256 Identities=17% Similarity=0.218 Sum_probs=157.6
Q ss_pred EEeecCCCCeEEEeC----------CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCC---Cc--EEEEc
Q 007283 21 LISGHPKSNSILYTN----------GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVS---GT--VRIWG 85 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~----------~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d---~~--i~vWd 85 (609)
...+ ||+.++|.. ...+.++++.+++... + ..+..++|||||++||.++.+ +. |.+|+
T Consensus 19 ~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 19 DPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred cceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 4444 889888852 3468899998776543 3 468999999999999977653 34 66667
Q ss_pred CCCCceeeEEEeecccceeEEEECCCCCEEEEEECCC-----------------C-----cceEEEEEcC--CCCeeEEE
Q 007283 86 AHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGK-----------------G-----KSLVRAFMWD--SGTNVGEF 141 (609)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~-----------------~-----~~~~~~~~~~--~~~~~~~~ 141 (609)
+.+++.. .+..... +..++|||||++|+...... + ....+++.|+ .+..+..+
T Consensus 92 ~~~g~~~--~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 92 LETLSSK--KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp TTTTEEE--EEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred CCCCceE--EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 7665432 2333334 89999999999999886320 0 0023345554 44432444
Q ss_pred ecCCccEEEEEEeeCCCeEEEEecCC------C-eEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC-----
Q 007283 142 DGHSRRVLSCAFKPSRPFRIATCGED------F-LVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD----- 209 (609)
Q Consensus 142 ~~h~~~v~~~~~~p~~~~~i~t~~~d------~-~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d----- 209 (609)
.. . .+..++|+|++ . ++++..+ . ...+|....++.. .+..+ ..+..+ +|||+.|+.++.+
T Consensus 169 ~~-~-~~~~~~~spdg-~-~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~ 240 (347)
T 2gop_A 169 EK-P-RFSSGIWHRDK-I-VVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYM 240 (347)
T ss_dssp EE-E-TTCEEEEETTE-E-EEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCC
T ss_pred cC-C-CcccccCCCCe-E-EEEEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCc
Confidence 44 3 77889999999 4 5555433 2 3344432244333 22233 445444 9999998888754
Q ss_pred ---CcEEEEeCCCCccccccCcCCCCccceEE-EEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccce
Q 007283 210 ---KKGIIYDGKTADKIGELSPEDGHKGSVYA-VSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDM 285 (609)
Q Consensus 210 ---~~i~iwd~~~~~~~~~~~~~~~h~~~V~~-l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 285 (609)
..+.+|| +++.. .+. .+|...+.. +.|+ |+ ++++++.++.+++| +. . ++....... . ..
T Consensus 241 ~~~~~l~~~d--~~~~~-~l~--~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~--g~~~~~~~~--~----~~ 303 (347)
T 2gop_A 241 SEHNKLYIYD--GKEVM-GIL--DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-D--GEIKPIAKG--R----HW 303 (347)
T ss_dssp CSSCEEEEEC--SSCEE-ESS--TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-S--SSEEEEECS--S----SE
T ss_pred cccceEEEEC--CCceE-ecc--ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-C--CceEEEecC--C----Ce
Confidence 3677887 44432 222 356677886 9999 88 89999999999999 86 2 333332221 1 12
Q ss_pred EEEEEEcCCeEEEEEcCCcE-EEEeCC
Q 007283 286 LVGCLWQNDFLVIVSLGGTI-SIFSAN 311 (609)
Q Consensus 286 ~~~~~~~~~~~~~~~~~g~i-~~~~~~ 311 (609)
+..+.+++..+++++.++.. .+|.++
T Consensus 304 v~~~~~s~~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 304 IMGFDVDEIVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEESSSEEEEEECSSSCCEEEEES
T ss_pred EEeeeeeCcEEEEEcCCCChHHheEeC
Confidence 23344445445555666554 666654
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=9e-15 Score=147.55 Aligned_cols=304 Identities=14% Similarity=0.042 Sum_probs=165.8
Q ss_pred EEEEEEeeCCCeEEEEecCC--CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 007283 148 VLSCAFKPSRPFRIATCGED--FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGE 225 (609)
Q Consensus 148 v~~~~~~p~~~~~i~t~~~d--~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~ 225 (609)
+..++|+|++..++.+...+ ..+.+|+...++......++......+.|+|||+.|+.++.++.+.+||..+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 66788999998755555443 3677778777665444444433333478999999999999999999999887764322
Q ss_pred cCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEE-----E
Q 007283 226 LSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIV-----S 300 (609)
Q Consensus 226 ~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 300 (609)
.. .+.+ |+|+|+.|+..+.+....+|..... +.+ +++.++.. .
T Consensus 118 ~~---~~~~------~~~~g~~l~~~~~~~~~~~~~~~~~--------~sp---------------dg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 118 YT---VDEE------WKGYGTWVANSDCTKLVGIEILKRD--------WQP---------------LTSWEKFAEFYHTN 165 (396)
T ss_dssp EE---CCTT------EEEEEEEEECTTSSEEEEEEEEGGG--------CCC---------------CCSHHHHHHHHHTC
T ss_pred Ee---cccc------cCCCCCEEEeccCCccccccccccc--------cCC---------------CCcceeeeeeccCC
Confidence 21 1222 5566666666655555555432100 000 00111100 1
Q ss_pred cCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcE
Q 007283 301 LGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEI 380 (609)
Q Consensus 301 ~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (609)
.+..+++|++.... ...+..+...+..+.+++.++..++..+.++.-
T Consensus 166 ~~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~------------------------------- 212 (396)
T 3c5m_A 166 PTCRLIKVDIETGE--LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHD------------------------------- 212 (396)
T ss_dssp CCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCSS-------------------------------
T ss_pred CcceEEEEECCCCc--EEeeccCCcccccceECCCCCCEEEEEecCCCC-------------------------------
Confidence 22334555543221 222233444556666654223333333322110
Q ss_pred EEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCC
Q 007283 381 VTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGS 460 (609)
Q Consensus 381 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~ 460 (609)
.....++.++..+.... . +... .....+..++++|||+
T Consensus 213 ---~~~~~l~~~d~~~~~~~---~-----------l~~~-------------------------~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 213 ---LVDARMWLVNEDGSNVR---K-----------IKEH-------------------------AEGESCTHEFWIPDGS 250 (396)
T ss_dssp ---SCSCCCEEEETTSCCCE---E-----------SSCC-------------------------CTTEEEEEEEECTTSS
T ss_pred ---CCCceEEEEECCCCcee---E-----------eecc-------------------------CCCccccceEECCCCC
Confidence 00012222222111000 0 0000 0001255678999999
Q ss_pred EEEEEeCC-----CcEEEEEecCCeeeeeEEEecCCCceEEEEECC-CCCEEEEEe----------------CCCeEEEE
Q 007283 461 EAIIGSQD-----GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSP-DVSMFASGD----------------VNREAIVW 518 (609)
Q Consensus 461 ~l~~gs~d-----g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~-~~~~l~s~s----------------~d~~v~iw 518 (609)
.++..+.+ +.|++|++.++..... ....+ .. +.|+| ||++++.++ .+..+++|
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~~l---~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~ 325 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLENEEV---MVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVL 325 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCEEEE---EECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEE
T ss_pred EEEEEecCCCCccceEEEEECCCCCeEEe---eeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEE
Confidence 88777654 4499999877654321 11222 33 88999 999988765 34789999
Q ss_pred EccCCceEEeeecCCCC-----------ceEEEEECCCCcEEEEEe-CCCeEEEEEcCC
Q 007283 519 DRVSREVKLKNMLYHTA-----------RINCLAWSPNNSMVATGS-LDTCVIIYEIDK 565 (609)
Q Consensus 519 d~~~~~~~~~~~~~h~~-----------~i~~l~~s~d~~~l~s~s-~D~~v~vw~~~~ 565 (609)
|+.+++.. .+..+.. .+..++|+|||++|+..+ .++...+|.++.
T Consensus 326 d~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 326 NTKAKSAQ--KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp ETTTTBCC--EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred ecccCceE--EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 98766532 2333443 256789999999887665 466777776653
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=3.5e-13 Score=129.31 Aligned_cols=234 Identities=14% Similarity=0.185 Sum_probs=162.2
Q ss_pred CceeEEeecCCCCeEEEe-CCCEEEEEeCCCCccccccc------cCCCCcEEEEE-CCCCCEEEEEeC-CCcEEEEcCC
Q 007283 17 GRGILISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYG------EHAYPATVARF-SPNGEWIASADV-SGTVRIWGAH 87 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~------~h~~~v~~~~~-sp~g~~las~~~-d~~i~vWd~~ 87 (609)
..|..++++|+|+.++.. ..+.|.+|+.. ++....+. +|...+..+++ .++|+++++... ++.|++||.
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~- 107 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ- 107 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-
Confidence 357889999999876664 35789999986 44433342 34456889999 688988887753 889999994
Q ss_pred CCceeeEEEee-cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC-CCeeEEEe--cCCccEEEEEEeeCCCeEEEE
Q 007283 88 NDHVLKKEFRV-LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS-GTNVGEFD--GHSRRVLSCAFKPSRPFRIAT 163 (609)
Q Consensus 88 ~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~h~~~v~~~~~~p~~~~~i~t 163 (609)
+++.+ ..+.. ....+..++++|+|+.+++...+. . ++.|+. +..+..+. ++...+..++++|++. ++++
T Consensus 108 ~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~---~--i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~ 180 (286)
T 1q7f_A 108 YGQFV-RKFGATILQHPRGVTVDNKGRIIVVECKVM---R--VIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFIS 180 (286)
T ss_dssp TSCEE-EEECTTTCSCEEEEEECTTSCEEEEETTTT---E--EEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEE
T ss_pred CCcEE-EEecCccCCCceEEEEeCCCCEEEEECCCC---E--EEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEE
Confidence 44433 22322 234688999999998666543221 2 444553 34444443 4456789999999986 5777
Q ss_pred ecCCCeEEEEeCCCCceeeecc--CcccceEEEEEcCCCCEEEEEeCCC-cEEEEeCCCCccccccCcCCCCccceEEEE
Q 007283 164 CGEDFLVNFYEGPPFKFKLSHR--GHSNFVNCVRFSPDGSKFISVSSDK-KGIIYDGKTADKIGELSPEDGHKGSVYAVS 240 (609)
Q Consensus 164 ~~~d~~i~~~~~~~~~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~ 240 (609)
...++.|.+|+.. ++....+. ++...+..++++|+|+++++...++ .|.+|+. +++.+..+... .....+.+++
T Consensus 181 ~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~-~~~~~~~~i~ 257 (286)
T 1q7f_A 181 DNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESK-VKHAQCFDVA 257 (286)
T ss_dssp EGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEES-SCCSCEEEEE
T ss_pred ECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEccc-CCCCcceeEE
Confidence 7778899999864 34443443 3446789999999999888877775 9999995 45544444221 1223478999
Q ss_pred ECCCCCeEEEEeCCCcEEEeecc
Q 007283 241 WSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 241 ~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
++|+|+++++ +.|++|++|++.
T Consensus 258 ~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 258 LMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp EETTTEEEEE-ETTTEEEEEECS
T ss_pred ECCCCcEEEE-CCCCeEEEEEcc
Confidence 9999987777 579999999975
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=9.7e-13 Score=126.19 Aligned_cols=151 Identities=12% Similarity=0.171 Sum_probs=109.6
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEee
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKN 529 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 529 (609)
+..++++|+|+.+++...++.|++|+...... .......+...+..++++|+|.++++...++.|++||..... +..
T Consensus 123 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--~~~ 199 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL-HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY--LRQ 199 (286)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTSCEE-EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE--EEE
T ss_pred ceEEEEeCCCCEEEEECCCCEEEEEcCCCCEE-EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE--EEE
Confidence 56788999999888888889999999654322 111112455678999999999999988889999999975432 222
Q ss_pred ec--CCCCceEEEEECCCCcEEEEEeCCC-eEEEEEcCCCCCcceeEeccc--cCCeEEEEEc-CCCeEEEEeCCCcEEE
Q 007283 530 ML--YHTARINCLAWSPNNSMVATGSLDT-CVIIYEIDKPASSRMTIKGAH--LGGVYGLAFT-DEHSVVSSGEDACVRV 603 (609)
Q Consensus 530 ~~--~h~~~i~~l~~s~d~~~l~s~s~D~-~v~vw~~~~~~~~~~~~~~~h--~~~v~~~~~s-~~~~l~s~s~D~~i~~ 603 (609)
+. ++...+..++++|+|+++++...++ .|.+|+.+. . . +.....+ ...+.+++++ +++.+++ +.|++|++
T Consensus 200 ~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~-~-~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v 275 (286)
T 1q7f_A 200 IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-Q-L-ISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYI 275 (286)
T ss_dssp ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-C-E-EEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEE
T ss_pred EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-C-E-EEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEE
Confidence 32 2336789999999999998888886 999999542 2 2 2222223 2347899999 5565666 67999999
Q ss_pred EEcc
Q 007283 604 WRLT 607 (609)
Q Consensus 604 W~~~ 607 (609)
|++.
T Consensus 276 ~~~~ 279 (286)
T 1q7f_A 276 YRYV 279 (286)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9985
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=8.6e-14 Score=137.67 Aligned_cols=225 Identities=8% Similarity=0.085 Sum_probs=152.6
Q ss_pred ceeEEeecCCCCeEEEeCC------CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCC-------------
Q 007283 18 RGILISGHPKSNSILYTNG------RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVS------------- 78 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d------------- 78 (609)
....+.++|||+.|++... ..+.++++.+++.......+ . +..++|+|||+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 3456899999999988642 24788898877665444433 3 9999999999999877632
Q ss_pred --------------CcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCc---c-eEEEEEcCCCCeeEE
Q 007283 79 --------------GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGK---S-LVRAFMWDSGTNVGE 140 (609)
Q Consensus 79 --------------~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~---~-~~~~~~~~~~~~~~~ 140 (609)
..|.+||+.+++.. ..+.. . .+..++|+||| .+++...+... . ..++|.++ ......
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~-~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVI-EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKEEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEE-EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEE-eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCceEE
Confidence 46888998876541 23333 3 78899999999 55555432210 1 34677777 444444
Q ss_pred EecCCccEEEEEEeeCCCeEEEEecC-------CCeEEEEeCCCCceeeeccCcccceEE-EEEcCCCCEEEEEeCCCcE
Q 007283 141 FDGHSRRVLSCAFKPSRPFRIATCGE-------DFLVNFYEGPPFKFKLSHRGHSNFVNC-VRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 141 ~~~h~~~v~~~~~~p~~~~~i~t~~~-------d~~i~~~~~~~~~~~~~~~~h~~~v~~-l~~s~dg~~l~s~~~d~~i 212 (609)
+..+ ..+..+ +|++..++..+.. ...+.+|+ .++......+|...+.. +.|+ || ++++++.++.+
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 4444 455544 9999864444432 24677777 45554455566777886 9999 88 88999999999
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcE-EEeecc
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSA-KVWDIS 263 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i-~iwd~~ 263 (609)
.|| ..+++.. .+. .+.+.|.+++|+| .++++++.+++. ++|.+.
T Consensus 286 ~l~-~~~g~~~-~~~---~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 286 NLY-IWDGEIK-PIA---KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEE-EESSSEE-EEE---CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EEE-EcCCceE-EEe---cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 999 7655432 221 3467899999999 677777777665 777764
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.62 E-value=4.1e-13 Score=131.60 Aligned_cols=245 Identities=14% Similarity=0.162 Sum_probs=162.4
Q ss_pred CCcEEEEECCCCCEEEEEeCC------------------------CcEEEEcCCCCceeeEEEeecccceeEEEECCCCC
Q 007283 58 YPATVARFSPNGEWIASADVS------------------------GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGL 113 (609)
Q Consensus 58 ~~v~~~~~sp~g~~las~~~d------------------------~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~ 113 (609)
+.+..++++|+|+++++.+.+ ++|.+||..+++.....-..+-.....++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 569999999999999988877 47999999877754321112334688999999998
Q ss_pred EEEEEECCCCcceEEEEEcCCCC-eeEEE---------ecCCccEEEEEEee-CCCeEEEEec-CCCeEEEEeCCCCcee
Q 007283 114 RIVACGDGKGKSLVRAFMWDSGT-NVGEF---------DGHSRRVLSCAFKP-SRPFRIATCG-EDFLVNFYEGPPFKFK 181 (609)
Q Consensus 114 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~h~~~v~~~~~~p-~~~~~i~t~~-~d~~i~~~~~~~~~~~ 181 (609)
.+++-. +. ..++.++.+... .+..+ .++......++++| ++. ++++.+ .++.|..|+ ..++..
T Consensus 104 l~v~d~-~~--~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 104 YWVTDV-AL--HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp EEEEET-TT--TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEEC-TTSCEE
T ss_pred EEEEEC-CC--CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEc-CCCCEE
Confidence 555532 22 234444433221 34445 34455789999999 555 566665 688999998 445555
Q ss_pred eecc----------CcccceEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECC------C
Q 007283 182 LSHR----------GHSNFVNCVRFSPD-GSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSP------D 244 (609)
Q Consensus 182 ~~~~----------~h~~~v~~l~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~sp------d 244 (609)
..+. ++......++++|+ |.++++...++.|.+|+..+++.+..+.. ..+...+.+++|+| +
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~pg~~~~~~ 257 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH-ASFGRNVFAISYIPGFLFAVN 257 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-TTTTTCEEEEEEETTEEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-cccCCCcceeeecCCEEEEeC
Confidence 4442 23445889999999 77777777889999999988887766532 24667789999999 3
Q ss_pred CCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCC
Q 007283 245 GKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHM 324 (609)
Q Consensus 245 ~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~ 324 (609)
|+..++.+.+.+|++|++.. ++....+.. ..++.
T Consensus 258 g~~~v~~~~~~~v~~~~~~~---g~~~~~~~~-------------------------------------------~~~~~ 291 (329)
T 3fvz_A 258 GKPYFGDQEPVQGFVMNFSS---GEIIDVFKP-------------------------------------------VRKHF 291 (329)
T ss_dssp CCCCTTCSCCCCEEEEETTT---CCEEEEECC-------------------------------------------SSSCC
T ss_pred CCEEeccCCCcEEEEEEcCC---CeEEEEEcC-------------------------------------------CCCcc
Confidence 33333333345777777642 333222210 01344
Q ss_pred CCeEEEEEecCCCCEEEEEecCCcEEEEecC
Q 007283 325 KNVTALTVLNIDPKVILSSSYDGLIVKWIQG 355 (609)
Q Consensus 325 ~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~ 355 (609)
..+..+++.+ ++.++++...++.|++|+..
T Consensus 292 ~~p~~ia~~~-dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 292 DMPHDIVASE-DGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp SSEEEEEECT-TSEEEEEESSSCCEEEEEEE
T ss_pred CCeeEEEECC-CCCEEEEECCCCEEEEEeCC
Confidence 5566777754 44788888889999999654
No 178
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=5.8e-12 Score=124.87 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=102.2
Q ss_pred CCCEEEEEECCCC---cceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEec---------CCCeEEEEeCCCC
Q 007283 111 DGLRIVACGDGKG---KSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCG---------EDFLVNFYEGPPF 178 (609)
Q Consensus 111 dg~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~---------~d~~i~~~~~~~~ 178 (609)
|++++.++..+.+ ...+.+++.++++.+..+..+..+ .++|+|++.+.+++.. .++.+.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 5666665543211 124556666677777777766555 8999999997555432 3677999998877
Q ss_pred ceeeeccC------cccceEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCccccc-cCcCCCCccceEEEEECCCC-CeE
Q 007283 179 KFKLSHRG------HSNFVNCVRFSPDGSKFISVSS--DKKGIIYDGKTADKIGE-LSPEDGHKGSVYAVSWSPDG-KQV 248 (609)
Q Consensus 179 ~~~~~~~~------h~~~v~~l~~s~dg~~l~s~~~--d~~i~iwd~~~~~~~~~-~~~~~~h~~~V~~l~~spd~-~~l 248 (609)
+....+.- +......++|+|||++|+++.. ++.|.+||..+++.+.. +.. . ....+.+.|++ ..+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~----~-~~~~v~~~p~~~~~~ 166 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA----A-GCWSVIPQPNRPRSF 166 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG----T-TEEEEEECTTSSSEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC----C-CcceeEEcCCCCeeE
Confidence 76655431 2244667899999999988863 67899999999887766 531 1 22335677876 677
Q ss_pred EEEeCCCcEEEeeccc
Q 007283 249 LTASADKSAKVWDISE 264 (609)
Q Consensus 249 ~s~s~d~~i~iwd~~~ 264 (609)
++.+.||++.+|+...
T Consensus 167 ~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 167 MTICGDGGLLTINLGE 182 (361)
T ss_dssp EEEETTSSEEEEEECT
T ss_pred EEECCCCcEEEEEECC
Confidence 8888999999998753
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=1.2e-12 Score=126.24 Aligned_cols=234 Identities=10% Similarity=0.033 Sum_probs=162.6
Q ss_pred ceeEEeecCCCCeEEEe--CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEE
Q 007283 18 RGILISGHPKSNSILYT--NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKE 95 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~--~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~ 95 (609)
.+-.+.++|+|+.|++. .++.+..|+..++ ...+..+...+.+++++|+|+++++...++.|.+||..+++....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~- 105 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI- 105 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE-
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE-
Confidence 34478899999844443 3578999999876 445666777899999999999998888889999999877653221
Q ss_pred Eeec----ccceeEEEECCCCCEEEEEEC-C-----------CCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCe
Q 007283 96 FRVL----SGRIDDLQWSPDGLRIVACGD-G-----------KGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPF 159 (609)
Q Consensus 96 ~~~~----~~~v~~~~~spdg~~l~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (609)
.... ...+..++++|||+.+++-.. + .......++.++....+..+..+......++|+|++..
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNL 185 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCE
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCE
Confidence 1111 124678999999987775320 0 00001246667654445555666777889999999987
Q ss_pred EEEEecCCCeEEEEeCC-CCce---eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccc
Q 007283 160 RIATCGEDFLVNFYEGP-PFKF---KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGS 235 (609)
Q Consensus 160 ~i~t~~~d~~i~~~~~~-~~~~---~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 235 (609)
+ ++...++.+..|+.. .++. ...+..+...+..++++++|+++++. ++.|.+|+.. ++.+..+. .+..
T Consensus 186 l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~---~~~~- 257 (296)
T 3e5z_A 186 L-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVL---TPQT- 257 (296)
T ss_dssp E-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE---CSSC-
T ss_pred E-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEE---CCCC-
Confidence 5 777888899999865 3443 22233345566789999999866655 8899999986 56555443 3445
Q ss_pred eEEEEE-CCCCCeEEEEeCCCcEEEeecc
Q 007283 236 VYAVSW-SPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 236 V~~l~~-spd~~~l~s~s~d~~i~iwd~~ 263 (609)
+.+++| +|+++.|+.++.++ +.-+++.
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred ceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 889999 68999888888663 4344443
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.56 E-value=1.2e-12 Score=142.50 Aligned_cols=241 Identities=8% Similarity=-0.056 Sum_probs=163.0
Q ss_pred eeEEeecCCCCeEEEeC---CC---EEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCc------------
Q 007283 19 GILISGHPKSNSILYTN---GR---SVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGT------------ 80 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~---~~---~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~------------ 80 (609)
...++++|||+.|+|.. |. .+.++|+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 44788999999999863 33 8999999988765432222 23678999999999998887766
Q ss_pred ----EEEEcCCCCcee-eEEEee--cccceeEEEECCCCCEEEEEECCCC--cceEEEEEcCC------CC-eeEEEecC
Q 007283 81 ----VRIWGAHNDHVL-KKEFRV--LSGRIDDLQWSPDGLRIVACGDGKG--KSLVRAFMWDS------GT-NVGEFDGH 144 (609)
Q Consensus 81 ----i~vWd~~~~~~~-~~~~~~--~~~~v~~~~~spdg~~l~~~~~~~~--~~~~~~~~~~~------~~-~~~~~~~h 144 (609)
|++|++.+++.. ...+.. +...+..++|||||++|+....... ...+.+++.+. +. ....+..+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 999999876521 112222 3345788999999999988764221 23455555544 32 35566666
Q ss_pred CccEEEEEEeeCCCeEEEEecCC---CeEEEEeCCCCce--eeeccCccc--ceEEEEEcCCCCEEEEEeCCCc--EEEE
Q 007283 145 SRRVLSCAFKPSRPFRIATCGED---FLVNFYEGPPFKF--KLSHRGHSN--FVNCVRFSPDGSKFISVSSDKK--GIIY 215 (609)
Q Consensus 145 ~~~v~~~~~~p~~~~~i~t~~~d---~~i~~~~~~~~~~--~~~~~~h~~--~v~~l~~s~dg~~l~s~~~d~~--i~iw 215 (609)
...+.. .|+|++..++..+..+ ..+..|+...+.. ...+..|.. .+..+.|++++.++++...|+. +.+|
T Consensus 286 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~ 364 (710)
T 2xdw_A 286 FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLH 364 (710)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEE
Confidence 666554 5888888655555433 4688888765431 123333433 6888999988778888888885 4556
Q ss_pred eCCCCccccccCcCCCCccceEEEEECCCCCeEEEE-e---CCCcEEEeeccc
Q 007283 216 DGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA-S---ADKSAKVWDISE 264 (609)
Q Consensus 216 d~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~-s---~d~~i~iwd~~~ 264 (609)
+..+++.+..+. .+.+.|..+.++|++..++.. + ..++++.||+..
T Consensus 365 ~~~~g~~~~~l~---~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 365 DLATGALLKIFP---LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp ETTTCCEEEEEC---CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred ECCCCCEEEecC---CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 766666555543 356778999999998765533 2 347899999864
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=2.7e-12 Score=139.72 Aligned_cols=230 Identities=10% Similarity=0.029 Sum_probs=144.8
Q ss_pred CCCCeEEEeC---C-C--EEEEEeCCCCccccc------cccCCCCcEEEEECCCCCEEEEEeCC-C----cEEEEcCCC
Q 007283 26 PKSNSILYTN---G-R--SVIILDLSNPLQVSI------YGEHAYPATVARFSPNGEWIASADVS-G----TVRIWGAHN 88 (609)
Q Consensus 26 ~~~~~l~~~~---~-~--~~~i~~~~~~~~~~~------~~~h~~~v~~~~~sp~g~~las~~~d-~----~i~vWd~~~ 88 (609)
|+|..++|.. + . .+.+.+..++..... -.+|...+..++|||||++||.++.+ | +|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 6777776652 2 1 344445444433211 12455568899999999999965543 2 899999998
Q ss_pred CceeeEEEeecccceeEEEECCCCCEEEEEECCCC-------------cceEEEEEcCCCCe--eEEEe--cCCccEEEE
Q 007283 89 DHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKG-------------KSLVRAFMWDSGTN--VGEFD--GHSRRVLSC 151 (609)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~--~h~~~v~~~ 151 (609)
++.....+ ....+..++|||||+.|+.+..... ...+.++...++.. ...+. .|...+..+
T Consensus 161 g~~~~~~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 161 AKELPDVL--ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TEEEEEEE--EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCcccc--cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 87543222 2223678999999999998875543 11233444434331 22233 345668899
Q ss_pred EEeeCCCeEEEEecC----CCeEEEEeCCC------Cc-eeeeccCcccceEEEEEcCCCCEEEEEeCC----CcEEEEe
Q 007283 152 AFKPSRPFRIATCGE----DFLVNFYEGPP------FK-FKLSHRGHSNFVNCVRFSPDGSKFISVSSD----KKGIIYD 216 (609)
Q Consensus 152 ~~~p~~~~~i~t~~~----d~~i~~~~~~~------~~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d----~~i~iwd 216 (609)
.|+|++..++.+... +..+.+|+... +. ....+..+...+.. .|+|+|+.|+..+.. ..+.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 999999975554431 56788888754 32 23334455555544 488999988777653 3589999
Q ss_pred CCCCcc--ccccCcCCCCc--cceEEEEECCCCCeEEEEeCCCcEEEee
Q 007283 217 GKTADK--IGELSPEDGHK--GSVYAVSWSPDGKQVLTASADKSAKVWD 261 (609)
Q Consensus 217 ~~~~~~--~~~~~~~~~h~--~~V~~l~~spd~~~l~s~s~d~~i~iwd 261 (609)
..++.. ...+. .|. ..+..+.|++++.++++...|+..++|-
T Consensus 318 ~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 318 FTDPEESKWKVLV---PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp TTSCCGGGCEEEE---CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CCCCCcccceecc---CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 877642 23332 232 3688899998888888888888655543
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=3.9e-12 Score=120.76 Aligned_cols=235 Identities=10% Similarity=-0.032 Sum_probs=158.7
Q ss_pred ceeEEeecCCCCeEE-E-eCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEE
Q 007283 18 RGILISGHPKSNSIL-Y-TNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKE 95 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~-~-~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~ 95 (609)
.|..+..+|+|+.++ . ..++.+.+|+..+.........+...+..++++|+|+++++.. ++.|.+||....... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~--~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT--V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE--E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe--e
Confidence 778999999998555 4 2357888998766554332233345688999999999777766 889999998764321 2
Q ss_pred Eee-cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE--ecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 96 FRV-LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF--DGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 96 ~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
+.. ....+..++++|+|+.+++...+. +++.++.+...... ......+..++++|++. ++++...++.+..
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNN-----RVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVK 175 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGT-----EEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCC-----EEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEE
Confidence 221 224688999999998666543221 23344544322222 22234577899999887 4666666778999
Q ss_pred EeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
|+............+...+..++++++|.++++...++.|.+|+........ .. ..+-..+.+++++|+|+++++.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEG
T ss_pred EecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEEC
Confidence 9876654443333444678899999999877777778899999976544322 11 12335689999999999888989
Q ss_pred CCCcEEEeeccc
Q 007283 253 ADKSAKVWDISE 264 (609)
Q Consensus 253 ~d~~i~iwd~~~ 264 (609)
.+++|+++++..
T Consensus 253 ~~~~v~~~~~~~ 264 (270)
T 1rwi_B 253 GNDRVVKLTSLE 264 (270)
T ss_dssp GGTEEEEECCCG
T ss_pred CCCEEEEEcCCC
Confidence 999999999864
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=2e-11 Score=119.89 Aligned_cols=235 Identities=11% Similarity=0.057 Sum_probs=157.3
Q ss_pred ceeEEeecCCCCeEEEe-CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCC----CcEEEEcCCCCcee
Q 007283 18 RGILISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVS----GTVRIWGAHNDHVL 92 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d----~~i~vWd~~~~~~~ 92 (609)
.+..+.++|+|+.++.. .++.+.+||..+++.......+...+.+++++|+|+++++...+ +.|.+||..+++..
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 45577889999865544 45789999998776554443566789999999999998887766 68999998776532
Q ss_pred eEEEe--ecccceeEEEECCCCCEEEEEECCC-CcceEEEEEcCCCC-eeEEEecCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 93 KKEFR--VLSGRIDDLQWSPDGLRIVACGDGK-GKSLVRAFMWDSGT-NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 93 ~~~~~--~~~~~v~~~~~spdg~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
..+. .....+..++++|+|+.+++...+. ......++.++... ....+..+...+..++|+|++..++++...++
T Consensus 126 -~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~ 204 (333)
T 2dg1_A 126 -DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTAN 204 (333)
T ss_dssp -EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGT
T ss_pred -EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCC
Confidence 1122 1234688999999998777654210 01123566666432 23333333445788999999986566666778
Q ss_pred eEEEEeCCC-Ccee--------eeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcC---CCCccce
Q 007283 169 LVNFYEGPP-FKFK--------LSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPE---DGHKGSV 236 (609)
Q Consensus 169 ~i~~~~~~~-~~~~--------~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~---~~h~~~V 236 (609)
.+.+|+... ++.. ..+.++ ..+..++++++|+++++...++.|.+||. .++.+..+... .+|...+
T Consensus 205 ~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~ 282 (333)
T 2dg1_A 205 RLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRS 282 (333)
T ss_dssp EEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBC
T ss_pred eEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCc
Confidence 899998642 2211 112233 45788999999998887778899999998 45544444211 1222368
Q ss_pred EEEEECCCCCeEEEEeCCC
Q 007283 237 YAVSWSPDGKQVLTASADK 255 (609)
Q Consensus 237 ~~l~~spd~~~l~s~s~d~ 255 (609)
.+++|+||+..|+.++.++
T Consensus 283 ~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 283 THPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp CEEEECTTSCEEEEEEECG
T ss_pred ceEEECCCCCEEEEEeCcc
Confidence 8999999987776555543
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=2.1e-11 Score=117.54 Aligned_cols=253 Identities=13% Similarity=0.063 Sum_probs=161.2
Q ss_pred EEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 007283 140 EFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 140 ~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
.+..+.....+++|+|++..+++++..++.|..|+.... ...+..+...+.+++++|+|+++++...++.+.+||..+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 344555667899999999866888888899999997765 444555677799999999999877776778999999877
Q ss_pred CccccccCcCCC-CccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEE
Q 007283 220 ADKIGELSPEDG-HKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVI 298 (609)
Q Consensus 220 ~~~~~~~~~~~~-h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (609)
++.........+ ....+..++++|+|+++++.+..+++..++.. .. . ...
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~---~~-----~--~~~------------------- 150 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGY---GG-----E--MEL------------------- 150 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSS---CC-----C--CCS-------------------
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccc---cc-----c--ccC-------------------
Confidence 764322211111 12346789999999888875432321111000 00 0 000
Q ss_pred EEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCC
Q 007283 299 VSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE 378 (609)
Q Consensus 299 ~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
..+ .+|.++ . ++.+...
T Consensus 151 --~~~--~l~~~~-----------------------~----------~g~~~~~-------------------------- 167 (296)
T 3e5z_A 151 --PGR--WVFRLA-----------------------P----------DGTLSAP-------------------------- 167 (296)
T ss_dssp --SSC--EEEEEC-----------------------T----------TSCEEEE--------------------------
T ss_pred --CCc--EEEEEC-----------------------C----------CCCEEEe--------------------------
Confidence 000 000000 0 0000000
Q ss_pred cEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC
Q 007283 379 EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD 458 (609)
Q Consensus 379 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 458 (609)
.........++++||
T Consensus 168 -----------------------------------------------------------------~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 168 -----------------------------------------------------------------IRDRVKPNGLAFLPS 182 (296)
T ss_dssp -----------------------------------------------------------------ECCCSSEEEEEECTT
T ss_pred -----------------------------------------------------------------ecCCCCCccEEECCC
Confidence 000012456788999
Q ss_pred CCEEEEEeCCCcEEEEEec-CCee-eeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeecCCCCc
Q 007283 459 GSEAIIGSQDGKLRVYSIR-GDTL-TEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTAR 536 (609)
Q Consensus 459 g~~l~~gs~dg~i~iw~~~-~~~~-~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~ 536 (609)
|+.+++.+.++.|++|++. .+.+ .....+..+.+.+..++++++|.+.++. ++.|.+||.... . +..+..+..
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~-~-~~~~~~~~~- 257 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD-E-LGRVLTPQT- 257 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC-E-EEEEECSSC-
T ss_pred CCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC-E-EEEEECCCC-
Confidence 9988777888999999986 4444 2223334456677889999999987776 789999997633 2 333445666
Q ss_pred eEEEEE-CCCCcEEEEEeCCC
Q 007283 537 INCLAW-SPNNSMVATGSLDT 556 (609)
Q Consensus 537 i~~l~~-s~d~~~l~s~s~D~ 556 (609)
+++++| +||++.|+.++.++
T Consensus 258 ~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 258 TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp CCEEEEESTTSCEEEEEETTE
T ss_pred ceeEEEECCCCCEEEEEcCCe
Confidence 999999 68999898888874
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.49 E-value=2.8e-12 Score=139.23 Aligned_cols=239 Identities=8% Similarity=-0.069 Sum_probs=159.3
Q ss_pred ceeEEeecCCCCeEEEe---CC---CEEEEEeCCCCccccccccCCCCc--EEEEECCCCCEEEEEeCCCc---------
Q 007283 18 RGILISGHPKSNSILYT---NG---RSVIILDLSNPLQVSIYGEHAYPA--TVARFSPNGEWIASADVSGT--------- 80 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~---~~---~~~~i~~~~~~~~~~~~~~h~~~v--~~~~~sp~g~~las~~~d~~--------- 80 (609)
....++++|||+.|+|. .| ..+++||+.+++.+. ..+-..+ ..++|+|||+.|+.++.|.+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 34578899999999976 33 489999999887641 1122222 67899999999999988776
Q ss_pred ----EEEEcCCCCce---eeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC-CeeEEEecCCccEEEEE
Q 007283 81 ----VRIWGAHNDHV---LKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG-TNVGEFDGHSRRVLSCA 152 (609)
Q Consensus 81 ----i~vWd~~~~~~---~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~ 152 (609)
|++|++.++.. +......+...+..++|||||++|+....... ....+|.++.. .....+..+...+....
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 99999987652 22222223456889999999999887764331 13356666642 23455556665666666
Q ss_pred EeeCCCeEEEEec---CCCeEEEEeCCCCce---eeeccCc-ccceEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcccc
Q 007283 153 FKPSRPFRIATCG---EDFLVNFYEGPPFKF---KLSHRGH-SNFVNCVRFSPDGSKFISVSSDKKGIIYDGK-TADKIG 224 (609)
Q Consensus 153 ~~p~~~~~i~t~~---~d~~i~~~~~~~~~~---~~~~~~h-~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~-~~~~~~ 224 (609)
+ |++. +++... .++.+..|+...++. ...+..+ ...+..++|+ ++.++++...|+..+||... .++...
T Consensus 279 ~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 279 A-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp E-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEE
T ss_pred e-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeE
Confidence 6 6666 555554 357888998765442 2223333 4568888888 66788888899988887543 344333
Q ss_pred ccCcCCCCccceEEEEECCCCCeEEEE----eCCCcEEEeeccc
Q 007283 225 ELSPEDGHKGSVYAVSWSPDGKQVLTA----SADKSAKVWDISE 264 (609)
Q Consensus 225 ~~~~~~~h~~~V~~l~~spd~~~l~s~----s~d~~i~iwd~~~ 264 (609)
.+. ....+.|..++++|++..++.. ...++|++||+..
T Consensus 356 ~l~--~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 356 TVQ--LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp ECC--CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred Eec--CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 332 1225678888999999866632 2347899999864
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=1.9e-11 Score=119.97 Aligned_cols=272 Identities=10% Similarity=0.070 Sum_probs=162.3
Q ss_pred cEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccccc
Q 007283 147 RVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGEL 226 (609)
Q Consensus 147 ~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~ 226 (609)
.|.+++|+|+... ++..+.+..++.|.. +....+.++...+.+++|+|+|++++++..++.|.+||..+++.....
T Consensus 7 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 7 DLPTLFYSGKSNS-AVPIISESELQTITA---EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCBCCSCGGGGC-SSCCCCGGGSCEEEC---EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred ccceeeecCCccc-eeEEeecccCccccc---ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 4566777777653 444466666677732 233344556667899999999998788888999999998877643322
Q ss_pred CcCCCCccceEEEEECCCCCeEEEEeCC----CcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcC
Q 007283 227 SPEDGHKGSVYAVSWSPDGKQVLTASAD----KSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLG 302 (609)
Q Consensus 227 ~~~~~h~~~V~~l~~spd~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (609)
. .+...+.+++++|+|+++++...+ +.|.+||... ++....+...
T Consensus 83 ~---~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~---~~~~~~~~~~------------------------- 131 (333)
T 2dg1_A 83 V---SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG---DNLQDIIEDL------------------------- 131 (333)
T ss_dssp E---CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS---CSCEEEECSS-------------------------
T ss_pred e---CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC---CEEEEEEccC-------------------------
Confidence 1 245679999999999988887666 6888888752 1111111000
Q ss_pred CcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecC----CcEEEEecCccccceeccccccceeEeeeeCC
Q 007283 303 GTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYD----GLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE 378 (609)
Q Consensus 303 g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~d----g~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (609)
.+...+..+++.+ ++.++++...+ +...+|
T Consensus 132 -------------------~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~-------------------------- 165 (333)
T 2dg1_A 132 -------------------STAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVY-------------------------- 165 (333)
T ss_dssp -------------------SSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEE--------------------------
T ss_pred -------------------ccCCcccceEECC-CCCEEEEeccccccCCCceEE--------------------------
Confidence 0112344555543 33444443321 112222
Q ss_pred cEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCC
Q 007283 379 EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPD 458 (609)
Q Consensus 379 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 458 (609)
.++..+.. .... .........++++||
T Consensus 166 ------------~~~~~~~~------------------------~~~~-----------------~~~~~~~~~i~~~~d 192 (333)
T 2dg1_A 166 ------------YVSPDFRT------------------------VTPI-----------------IQNISVANGIALSTD 192 (333)
T ss_dssp ------------EECTTSCC------------------------EEEE-----------------EEEESSEEEEEECTT
T ss_pred ------------EEeCCCCE------------------------EEEe-----------------ecCCCcccceEECCC
Confidence 21111000 0000 000012566789999
Q ss_pred CCEE-EEEeCCCcEEEEEecC-C-eeee--eEE---EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeee
Q 007283 459 GSEA-IIGSQDGKLRVYSIRG-D-TLTE--EAV---LEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNM 530 (609)
Q Consensus 459 g~~l-~~gs~dg~i~iw~~~~-~-~~~~--~~~---~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 530 (609)
|+.+ ++.+.++.|++|++.. + .+.. ... +.++ ..+..++++++|.+.++...++.|.+||.... . +..+
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~-~-~~~~ 269 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGY-P-IGQI 269 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSC-E-EEEE
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCC-E-EEEE
Confidence 9865 4555688999999853 2 2211 011 1122 46788999999999988888899999997433 2 2222
Q ss_pred cCCC------CceEEEEECCCCcEEEEEeCC
Q 007283 531 LYHT------ARINCLAWSPNNSMVATGSLD 555 (609)
Q Consensus 531 ~~h~------~~i~~l~~s~d~~~l~s~s~D 555 (609)
..+. ..+.+++|+||++.|+.++.+
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 2232 268999999998777655554
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.48 E-value=3.1e-10 Score=118.37 Aligned_cols=313 Identities=13% Similarity=0.118 Sum_probs=197.6
Q ss_pred CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCC--CCceeeEEEeecccceeEEEEC----
Q 007283 36 GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAH--NDHVLKKEFRVLSGRIDDLQWS---- 109 (609)
Q Consensus 36 ~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~--~~~~~~~~~~~~~~~v~~~~~s---- 109 (609)
++.+.++|..+++.+..+... ..+..++|||||+++..++.|+.|.+||+. +.+.. .++... .....++||
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-~~i~~G-~~P~~ia~s~~~~ 252 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV-AEIKIG-SEARSIETSKMEG 252 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE-EEEECC-SEEEEEEECCSTT
T ss_pred CCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe-EEEecC-CCCceeEEccccC
Confidence 479999999998877665432 346689999999999999999999999995 55443 334432 246789999
Q ss_pred CCCCEEEEEECCCCcceEEEEEcCCCCeeEEEec----------CC-ccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC
Q 007283 110 PDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG----------HS-RRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF 178 (609)
Q Consensus 110 pdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------h~-~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~ 178 (609)
|||++++++..... .+.+++-.+.+.+..+.- |. ..+..+.++++++..+++....+.+.+.|....
T Consensus 253 pDGk~l~v~n~~~~--~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 253 WEDKYAIAGAYWPP--QYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp CTTTEEEEEEEETT--EEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS
T ss_pred CCCCEEEEEEccCC--eEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCC
Confidence 79999998764432 355666666666665531 22 267888889988877777777888888887654
Q ss_pred cee-eeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCc--CCCCccceEEEEECCCCC-eEEEEe-
Q 007283 179 KFK-LSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSP--EDGHKGSVYAVSWSPDGK-QVLTAS- 252 (609)
Q Consensus 179 ~~~-~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~--~~~h~~~V~~l~~spd~~-~l~s~s- 252 (609)
+.. ............+.|+|+|++++++. .++.|.++|..+++.+..+.. ...|.+.-..+ ++|++. .+++..
T Consensus 331 ~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~ 409 (567)
T 1qks_A 331 NNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHM 409 (567)
T ss_dssp SEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBS
T ss_pred ccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCC
Confidence 321 11112334567889999999876665 578999999999887655432 12354322222 688744 444543
Q ss_pred CCCcEEEeecccCCC----CceEEEeccCCCCCccceEEEEEEcCCeEEEEEc-------CCcEEEEeCCCC-----CCC
Q 007283 253 ADKSAKVWDISEDNH----GKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSL-------GGTISIFSANDL-----EKS 316 (609)
Q Consensus 253 ~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~i~~~~~~~~-----~~~ 316 (609)
.+++|.++|...... .+..+++...+.+. ..+....++.++++... .++|.+++.... ...
T Consensus 410 g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~---~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~ 486 (567)
T 1qks_A 410 GDDSVALIGTDPEGHPDNAWKILDSFPALGGGS---LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPE 486 (567)
T ss_dssp SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC---CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCC
T ss_pred CCCeEEEecCCCCCCccccCEEEEEEecCCCCC---EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCC
Confidence 468999999864211 34555554332211 11222223445555442 358999987654 221
Q ss_pred ceeee--------CCCCCeEEEEEecCCCCEEEEEe----cCCcEEEEecCcc
Q 007283 317 PLQLS--------GHMKNVTALTVLNIDPKVILSSS----YDGLIVKWIQGIG 357 (609)
Q Consensus 317 ~~~~~--------~h~~~v~~~~~~~~~~~~~~t~s----~dg~i~~W~~~~~ 357 (609)
...+. .-.+.+..+.|......+.++.. .++.|.+.|..+.
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 487 FKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp EEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred cEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 12221 12346777777754444555532 3688888776543
No 188
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.47 E-value=8.3e-10 Score=106.15 Aligned_cols=235 Identities=7% Similarity=-0.066 Sum_probs=161.0
Q ss_pred CceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccc-cccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeE
Q 007283 17 GRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSI-YGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKK 94 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~-~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~ 94 (609)
..|..+..+|+|+..+... ++.+.+|+.. +..... ...+...+..++++|+|++.++...++.|..|+.. ++....
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 92 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEY 92 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEE
Confidence 4677999999998777665 5789999987 443221 22345679999999999998888778899999975 332211
Q ss_pred EEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE--ecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 95 EFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF--DGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 95 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
.+......+..++++|+|..+++...+. .++.++.......+ ..+...+..++++|++. ++++...++.+..
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~-----~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGN-----RIGRITDDGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGR 166 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTT-----EEEEECTTCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCc-----eEEEECCCCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEE
Confidence 2222345688999999998776643222 23344432222222 23456788999999986 4666666678888
Q ss_pred EeCCCCceeee-ccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 173 YEGPPFKFKLS-HRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 173 ~~~~~~~~~~~-~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
++. .++.... ...+...+..++++++|.++++...++.+.+||. +++... +. ...+...+.+++++++|+++++.
T Consensus 167 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~-~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 167 ITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FK-IPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred EcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EE-CCCCCCCceeEEECCCCCEEEec
Confidence 887 5544322 3334556889999999997776666889999998 555322 21 12345678999999999977776
Q ss_pred eCCCcEEEeecc
Q 007283 252 SADKSAKVWDIS 263 (609)
Q Consensus 252 s~d~~i~iwd~~ 263 (609)
..++.|..||..
T Consensus 243 ~~~~~i~~~d~~ 254 (299)
T 2z2n_A 243 WGANKIGRLTSN 254 (299)
T ss_dssp TTTTEEEEEETT
T ss_pred cCCceEEEECCC
Confidence 678899999973
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.46 E-value=4.1e-11 Score=116.43 Aligned_cols=240 Identities=8% Similarity=0.001 Sum_probs=159.8
Q ss_pred ceeEEeecCCCCeEEE--------eCCCEEEEEeCCCCccccccc----cCCCCcEEEEECCC-CCEEEEEeCCCcEEEE
Q 007283 18 RGILISGHPKSNSILY--------TNGRSVIILDLSNPLQVSIYG----EHAYPATVARFSPN-GEWIASADVSGTVRIW 84 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~--------~~~~~~~i~~~~~~~~~~~~~----~h~~~v~~~~~sp~-g~~las~~~d~~i~vW 84 (609)
.|..+.++++|+.++. ..++.+.+|+..+++...... ++...+..++++|+ |+++++... ..|.+|
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-~~l~~~ 97 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-LGLLVV 97 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-TEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-CCEEEE
Confidence 3457788899976666 345789999987766533221 25567899999999 887666543 378889
Q ss_pred cCCCCceeeEE-Eee----cccceeEEEECCCCCEEEEEECCC----------CcceEEEEEcCCCCeeEEEecCCccEE
Q 007283 85 GAHNDHVLKKE-FRV----LSGRIDDLQWSPDGLRIVACGDGK----------GKSLVRAFMWDSGTNVGEFDGHSRRVL 149 (609)
Q Consensus 85 d~~~~~~~~~~-~~~----~~~~v~~~~~spdg~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~h~~~v~ 149 (609)
|.. ++.. .. ... ....+..++++|+|+.+++...+. ......++.++.......+..+.....
T Consensus 98 d~~-g~~~-~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~ 175 (314)
T 1pjx_A 98 QTD-GTFE-EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPN 175 (314)
T ss_dssp ETT-SCEE-ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEE
T ss_pred eCC-CCEE-EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCcc
Confidence 987 5432 11 111 123478999999998777654220 000134666664333333333344567
Q ss_pred EEEEe----eCCCeEEEEecCCCeEEEEeCC-CCc-----eeeeccCcc-cceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 007283 150 SCAFK----PSRPFRIATCGEDFLVNFYEGP-PFK-----FKLSHRGHS-NFVNCVRFSPDGSKFISVSSDKKGIIYDGK 218 (609)
Q Consensus 150 ~~~~~----p~~~~~i~t~~~d~~i~~~~~~-~~~-----~~~~~~~h~-~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~ 218 (609)
.++++ |++..++++...++.+..|+.. .++ ....+.++. .....++++++|+++++...++.|.+||..
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 88999 9987656666777888888754 332 222334444 567889999999988887788999999988
Q ss_pred CCccccccCcCCCCccceEEEEECCCCCe-EEEEeCCCcEEEeecc
Q 007283 219 TADKIGELSPEDGHKGSVYAVSWSPDGKQ-VLTASADKSAKVWDIS 263 (609)
Q Consensus 219 ~~~~~~~~~~~~~h~~~V~~l~~spd~~~-l~s~s~d~~i~iwd~~ 263 (609)
+++.+..+. .+...+.+++|+|+++. +++...++.|..|++.
T Consensus 256 ~g~~~~~~~---~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 256 GGQPKMRIR---CPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CBSCSEEEE---CSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCcEeEEEe---CCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 676554442 34467999999999994 4555566889999875
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=5.9e-12 Score=136.71 Aligned_cols=230 Identities=13% Similarity=0.073 Sum_probs=142.5
Q ss_pred CCCCeEEEeC---C---CEEEEEeCCCCcccccc------ccCCCCcEEEEECCCCCEEE-----EEeCCCcEEEEcCCC
Q 007283 26 PKSNSILYTN---G---RSVIILDLSNPLQVSIY------GEHAYPATVARFSPNGEWIA-----SADVSGTVRIWGAHN 88 (609)
Q Consensus 26 ~~~~~l~~~~---~---~~~~i~~~~~~~~~~~~------~~h~~~v~~~~~sp~g~~la-----s~~~d~~i~vWd~~~ 88 (609)
|+|..++|.. + ..+.+.+...+.....+ .+|...+..++|||||++|| +|+.+.+|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6677776652 1 23344444444432222 25666789999999999999 445567899999998
Q ss_pred CceeeEEEeecccce--eEEEECCCCCEEEEEECCCC----------cceEEEEEcCCCC----eeEEEecCCccEEEEE
Q 007283 89 DHVLKKEFRVLSGRI--DDLQWSPDGLRIVACGDGKG----------KSLVRAFMWDSGT----NVGEFDGHSRRVLSCA 152 (609)
Q Consensus 89 ~~~~~~~~~~~~~~v--~~~~~spdg~~l~~~~~~~~----------~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~ 152 (609)
++.+. ..+...+ ..++|||||+.|+.+..+.. ...+++|...++. .+.....|...+..+.
T Consensus 157 g~~~~---~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 157 GEWSK---VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp CCBCS---SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCcC---CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 76431 1121223 68999999999998876443 1224444444433 2222334556789999
Q ss_pred EeeCCCeEEEEecCC-C--eEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCcc--c
Q 007283 153 FKPSRPFRIATCGED-F--LVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSS----DKKGIIYDGKTADK--I 223 (609)
Q Consensus 153 ~~p~~~~~i~t~~~d-~--~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~----d~~i~iwd~~~~~~--~ 223 (609)
|+|++..++.+...+ . .+.+++.+.++.. .+..+...+....+ ++|. |+..+. ++.+.+||..+++. +
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 999998755544333 2 5556665444332 23334445555556 6766 554443 57899999877653 2
Q ss_pred cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 224 GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 224 ~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
..+... .+...+..++|+ ++.++++...|+..++|.+.
T Consensus 311 ~~l~~~-~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 311 KEIVPE-DSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEECC-CSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred eEEecC-CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 222211 124468888988 67788899999999988765
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.46 E-value=9.7e-10 Score=114.65 Aligned_cols=325 Identities=14% Similarity=0.105 Sum_probs=196.1
Q ss_pred eEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCccccccCcCCCCccce
Q 007283 159 FRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK--TADKIGELSPEDGHKGSV 236 (609)
Q Consensus 159 ~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~h~~~V 236 (609)
..+++...++.+.++|..+++....+... ..+..+.|+|||+++.+++.|+.+.+||.. +.+.+..+.. + ..-
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G--~~P 242 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--G--SEA 242 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--C--SEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--C--CCC
Confidence 45777888899999999988877665422 246689999999999999999999999985 6666655532 2 235
Q ss_pred EEEEEC----CCCCeEEEEeC-CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCC
Q 007283 237 YAVSWS----PDGKQVLTASA-DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSAN 311 (609)
Q Consensus 237 ~~l~~s----pd~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~ 311 (609)
..++|+ |||++++++.. ++++.++|.. ..+.++.+...+.. .+
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~---t~~~~~~i~~~~~~-----------------------------~~ 290 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE---TLEPKKIQSTRGMT-----------------------------YD 290 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETT---TCCEEEEEECCEEC-----------------------------TT
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECC---CCcEEEEEeccccc-----------------------------cc
Confidence 789999 69998887765 5899999965 23444433211000 00
Q ss_pred CCCCCceeeeCCCC-CeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEE
Q 007283 312 DLEKSPLQLSGHMK-NVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIW 390 (609)
Q Consensus 312 ~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 390 (609)
. ...|.. .+..+..+...+.++++...+|.|.+++...... +
T Consensus 291 ~-------~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~--------------------~---------- 333 (567)
T 1qks_A 291 E-------QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN--------------------L---------- 333 (567)
T ss_dssp T-------CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE--------------------E----------
T ss_pred c-------ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc--------------------c----------
Confidence 0 000111 3334443333344555555556665554321000 0
Q ss_pred EEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEe-CCC
Q 007283 391 RVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGS-QDG 469 (609)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs-~dg 469 (609)
....+..........++|+|++++++. .++
T Consensus 334 -------------------------------------------------~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn 364 (567)
T 1qks_A 334 -------------------------------------------------KTTEISAERFLHDGGLDGSHRYFITAANARN 364 (567)
T ss_dssp -------------------------------------------------EEEEEECCSSEEEEEECTTSCEEEEEEGGGT
T ss_pred -------------------------------------------------eeeeeeccccccCceECCCCCEEEEEeCCCC
Confidence 000000111244567899999987665 578
Q ss_pred cEEEEEecCCeeeeeEEE---ecCCCceEEEEECCCC-CEEEEEe-CCCeEEEEEccCCc-----e-EEeeecCCCCceE
Q 007283 470 KLRVYSIRGDTLTEEAVL---EKHRGAVSVIRYSPDV-SMFASGD-VNREAIVWDRVSRE-----V-KLKNMLYHTARIN 538 (609)
Q Consensus 470 ~i~iw~~~~~~~~~~~~~---~~h~~~i~~v~~s~~~-~~l~s~s-~d~~v~iwd~~~~~-----~-~~~~~~~h~~~i~ 538 (609)
+|.++|..++.+...... ..|.+.-..+ ++|++ ...+++. .+++|.++|..+.. . .++.+......-.
T Consensus 365 ~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~ 443 (567)
T 1qks_A 365 KLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL 443 (567)
T ss_dssp EEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC
T ss_pred eEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCE
Confidence 999999998876543322 1354332222 68884 4555543 46899999976621 1 1222332222223
Q ss_pred EEEECCCCcEEEEEeC-------CCeEEEEEcCCCC----CcceeEec-c-------ccCCeEEEEEc-CCCe-EEEEe-
Q 007283 539 CLAWSPNNSMVATGSL-------DTCVIIYEIDKPA----SSRMTIKG-A-------HLGGVYGLAFT-DEHS-VVSSG- 596 (609)
Q Consensus 539 ~l~~s~d~~~l~s~s~-------D~~v~vw~~~~~~----~~~~~~~~-~-------h~~~v~~~~~s-~~~~-l~s~s- 596 (609)
-++.+||+++|..... .++|.|+|+.+.. ........ + -..++..+.|+ +++. ++|..
T Consensus 444 ~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 444 FIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp CEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred EEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec
Confidence 4778999999988763 4599999997541 11111111 1 13468899999 6665 45644
Q ss_pred ---CCCcEEEEEcc
Q 007283 597 ---EDACVRVWRLT 607 (609)
Q Consensus 597 ---~D~~i~~W~~~ 607 (609)
.++.|.+.|..
T Consensus 524 ~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 524 GKDQESALVVVDDK 537 (567)
T ss_dssp CTTSCCEEEEEETT
T ss_pred CCCCCCcEEEEECC
Confidence 37889888764
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=1.2e-10 Score=110.28 Aligned_cols=214 Identities=10% Similarity=0.033 Sum_probs=155.7
Q ss_pred CCeEEEeC-CCEEEEEeCCCCccccccccCC-CCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec-cccee
Q 007283 28 SNSILYTN-GRSVIILDLSNPLQVSIYGEHA-YPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL-SGRID 104 (609)
Q Consensus 28 ~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~-~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~-~~~v~ 104 (609)
++.|+... .+.+.+||.++++.+..+..|. ..+..++++|+|++|++ .++.|+.||. +++.+ .++... ...+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~-W~~~~~~~~~~~ 80 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGREL-WNIAAPAGCEMQ 80 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEE-EEEECCTTCEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEE-EEEcCCCCcccc
Confidence 45566554 4799999998999888787765 46889999999999994 4778999998 66643 445543 24688
Q ss_pred EEEECCCCCEEEEEECCCCcceEEEEEcC-CCCeeEEEe------cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC
Q 007283 105 DLQWSPDGLRIVACGDGKGKSLVRAFMWD-SGTNVGEFD------GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP 177 (609)
Q Consensus 105 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~ 177 (609)
.+++.|||+.+++...+. .+++.++ .++.+..+. ++......+++.+++.. +++...++.+..||..
T Consensus 81 ~~~~~~dG~~lv~~~~~~----~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~-lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 81 TARILPDGNALVAWCGHP----STILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY-LVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEECTTSCEEEEEESTT----EEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE-EEEETTTTEEEEECTT-
T ss_pred ccEECCCCCEEEEecCCC----CEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE-EEEecCCCEEEEECCC-
Confidence 899999999999866422 2345554 455555553 12223445567888874 7888889999999987
Q ss_pred CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCC--C-CccceEEEEECCCCCeEEEEe
Q 007283 178 FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPED--G-HKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 178 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~-h~~~V~~l~~spd~~~l~s~s 252 (609)
++....+..+ ....++.+.++|+.++++..++.+..+|..+++.+..+.... + .-..+..+...++|..+++..
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8877776554 345567889999999988888899999999899877663211 1 123378889999999888874
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=2.3e-10 Score=111.85 Aligned_cols=264 Identities=12% Similarity=0.078 Sum_probs=163.2
Q ss_pred CCCeEEEEeCCCCceeeecc------CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEE
Q 007283 166 EDFLVNFYEGPPFKFKLSHR------GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAV 239 (609)
Q Consensus 166 ~d~~i~~~~~~~~~~~~~~~------~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l 239 (609)
.++.+.++|..+++...... ........+.+. +++.+++...++.+.++|..+++.+.++. .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEE
Confidence 47889999988877654321 122345677774 34556666678999999999998877663 23457899
Q ss_pred EECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCcee
Q 007283 240 SWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQ 319 (609)
Q Consensus 240 ~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 319 (609)
+++|+++.+++...++.|.+||+.. ++....+.....
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t---~~~~~~i~~g~~---------------------------------------- 126 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKT---YEITGYIECPDM---------------------------------------- 126 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTT---TEEEEEEECTTC----------------------------------------
T ss_pred EEeCCCeEEEEECCCCeEEEEECCC---CeEEEEEEcCCc----------------------------------------
Confidence 9999996555555789999999862 333333221100
Q ss_pred eeCCCCCeEEEEEecCCCCEEEEEe-cCCcEEEEecCccccceeccccccceeEeeeeCCcEEEEeccceEEEEeccCCc
Q 007283 320 LSGHMKNVTALTVLNIDPKVILSSS-YDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQ 398 (609)
Q Consensus 320 ~~~h~~~v~~~~~~~~~~~~~~t~s-~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~ 398 (609)
.+.......+++. ++.++++.. .++.|.+++..+...
T Consensus 127 -~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~--------------------------------------- 164 (328)
T 3dsm_A 127 -DMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKV--------------------------------------- 164 (328)
T ss_dssp -CTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEE---------------------------------------
T ss_pred -cccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeE---------------------------------------
Confidence 0001111223331 224444443 467777776543210
Q ss_pred cccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEEEEeCC----------
Q 007283 399 CGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQD---------- 468 (609)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~~gs~d---------- 468 (609)
...+........++++|+|++++++..+
T Consensus 165 ------------------------------------------~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 165 ------------------------------------------VDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp ------------------------------------------EEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred ------------------------------------------EEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCC
Confidence 0000000113445678999877777655
Q ss_pred CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEeeec-CCCCceEEEEECC-CC
Q 007283 469 GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNML-YHTARINCLAWSP-NN 546 (609)
Q Consensus 469 g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~h~~~i~~l~~s~-d~ 546 (609)
+.|.++|..++.+.....+ ........++|+||+.++.++.. .+.+||..+.+....... .+.....+++++| ++
T Consensus 203 ~~v~~id~~t~~v~~~~~~-~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g 279 (328)
T 3dsm_A 203 PSLYRIDAETFTVEKQFKF-KLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNG 279 (328)
T ss_dssp CEEEEEETTTTEEEEEEEC-CTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTC
T ss_pred ceEEEEECCCCeEEEEEec-CCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCC
Confidence 7899999877765422221 11236899999999998887665 899999877654211111 1245688999999 55
Q ss_pred cEEEEE----eCCCeEEEEEcC
Q 007283 547 SMVATG----SLDTCVIIYEID 564 (609)
Q Consensus 547 ~~l~s~----s~D~~v~vw~~~ 564 (609)
+++++. ..++.|.+||.+
T Consensus 280 ~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 280 EVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CEEEEECTTSSSEEEEEEECTT
T ss_pred eEEEEcccccccCCEEEEECCC
Confidence 666666 678999999986
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=3.9e-09 Score=101.42 Aligned_cols=276 Identities=8% Similarity=-0.019 Sum_probs=171.0
Q ss_pred CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC
Q 007283 56 HAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG 135 (609)
Q Consensus 56 h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 135 (609)
+...+.+++++|+|++.++...++.|.+||.. ++............+..++++|+|..+++...+. +++.++..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-----~i~~~~~~ 86 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAAN-----KIGRITKK 86 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT-----EEEEECTT
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCC-----eEEEECCC
Confidence 44568999999999988887778899999987 5432222222345789999999998777643222 24444433
Q ss_pred CeeEEEe--cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee-eeccCcccceEEEEEcCCCCEEEEEeCCCcE
Q 007283 136 TNVGEFD--GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK-LSHRGHSNFVNCVRFSPDGSKFISVSSDKKG 212 (609)
Q Consensus 136 ~~~~~~~--~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~-~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i 212 (609)
.....+. .....+..++++|++. ++++...++.+..++. .++.. .....+...+..+++.++|..+++...++.+
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 3333333 3455788999999886 4666666778888886 44332 2233345678999999999887777677899
Q ss_pred EEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 213 IIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 213 ~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
..||. +++... +. ...+...+.++++.++|+++++...++.|..||.. ++.......... .....+...
T Consensus 165 ~~~~~-~g~~~~-~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~----~~~~~i~~~ 233 (299)
T 2z2n_A 165 GRITE-SGDITE-FK-IPTPASGPVGITKGNDDALWFVEIIGNKIGRITTS----GEITEFKIPTPN----ARPHAITAG 233 (299)
T ss_dssp EEECT-TCCEEE-EE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT----CCEEEEECSSTT----CCEEEEEEC
T ss_pred EEEcC-CCcEEE-ee-CCCCCCcceeEEECCCCCEEEEccCCceEEEECCC----CcEEEEECCCCC----CCceeEEEC
Confidence 99998 554332 11 11234568899999999987777778899999972 222221111111 112223333
Q ss_pred -CCeEEEEE-cCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEec
Q 007283 293 -NDFLVIVS-LGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQ 354 (609)
Q Consensus 293 -~~~~~~~~-~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~ 354 (609)
+..+.++. .++.+..|+.+ .......+..+...+.++++ .++.+.++.+ .+.+..++.
T Consensus 234 ~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 234 AGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF--DGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp STTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE--CSSCEEEEET-TTEEEEEEE
T ss_pred CCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe--cCCCEEEEec-CCcEEEEEc
Confidence 33455554 56788888863 11111123345567778877 3455555554 444544443
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=4e-10 Score=108.42 Aligned_cols=225 Identities=9% Similarity=0.073 Sum_probs=152.9
Q ss_pred EEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEee
Q 007283 21 LISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRV 98 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~ 98 (609)
...++|+++.|++.. ++.+..||..++.... + .+...+.+++++|+|+++++. +..|.+||..+++... ....
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~-~~~~ 91 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVV-LATV 91 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEE-EEEC
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEE-EEec
Confidence 566788777776653 5789999998765532 3 235679999999999977765 5679999988765321 1111
Q ss_pred c----ccceeEEEECCCCCEEEEEECCCC------cceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 99 L----SGRIDDLQWSPDGLRIVACGDGKG------KSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 99 ~----~~~v~~~~~spdg~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
. ...+..++++|||+.+++...... .....++.++....+..+..+......++|+|++..++++...++
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCC
Confidence 1 234788999999997775432110 122456666654333333334445678999999987677777778
Q ss_pred eEEEEeC--CCCce-----eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEE
Q 007283 169 LVNFYEG--PPFKF-----KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSW 241 (609)
Q Consensus 169 ~i~~~~~--~~~~~-----~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~ 241 (609)
.|..|+. ..+.. ...+..+......+++.++|+++++...++.|..||..+++.+..+. .+...+++++|
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~---~p~~~~t~~~f 248 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK---LPVDKTTSCCF 248 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE---CSSSBEEEEEE
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE---CCCCCceEEEE
Confidence 8888875 34432 12233344567889999999888877778889999998888776653 24467999999
Q ss_pred C-CCCCeEEEEeC
Q 007283 242 S-PDGKQVLTASA 253 (609)
Q Consensus 242 s-pd~~~l~s~s~ 253 (609)
. ||++.|+..+.
T Consensus 249 ~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 249 GGKNYSEMYVTCA 261 (297)
T ss_dssp ESGGGCEEEEEEB
T ss_pred eCCCCCEEEEEcC
Confidence 8 88876655543
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.39 E-value=2.2e-10 Score=108.52 Aligned_cols=193 Identities=6% Similarity=0.077 Sum_probs=138.7
Q ss_pred CCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecc-cceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecC-
Q 007283 67 PNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLS-GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGH- 144 (609)
Q Consensus 67 p~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h- 144 (609)
..|++|++++.|+.|++||.++++.+ .++..+. ..+..++++|+|+.|++ .++ .+..++. +++.+..+..+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~~~~~~pdG~ilvs-~~~----~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECNSVAATKAGEILFS-YSK----GAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEE-EEEECCTTCCCCEEEECTTSCEEEE-CBS----EEEEECT-TSCEEEEEECCT
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEE-EEeCCCccCCCcCeEECCCCCEEEe-CCC----CEEEECC-CCCEEEEEcCCC
Confidence 35689999999999999999888754 4455544 46889999999998883 321 2444444 57777888765
Q ss_pred CccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc------CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 007283 145 SRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR------GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK 218 (609)
Q Consensus 145 ~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~------~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~ 218 (609)
...+.++.+.|++..+++.++.++.+..++. .++....+. ++......+.+.++|+++++...++.+..||.+
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 3578899999999864444443666666664 454433321 233345566789999999999999999999988
Q ss_pred CCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 219 TADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 219 ~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
++.+..+.. .....++.+.++|..+++++.+++|..+|.. .++.+-.+.
T Consensus 155 -G~~~w~~~~----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~---tG~~~w~~~ 203 (276)
T 3no2_A 155 -GQLLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE---SNRIVRRVN 203 (276)
T ss_dssp -SCEEEEEEC----SSCCCEEEECTTSCEEEECBTTSEEEEECTT---TCCEEEEEE
T ss_pred -CCEEEEEEC----CCCccceeEcCCCCEEEEeCCCCeEEEEeCc---CCcEEEEec
Confidence 887776632 2345678888999999999888899999976 355655553
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.36 E-value=3.2e-10 Score=123.92 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=139.3
Q ss_pred CCCCeEEEeC---C---CEEEEEeCC---CCccccc------cccCCCCcEEEEECCCCCEEEEEeCC-----CcEEEEc
Q 007283 26 PKSNSILYTN---G---RSVIILDLS---NPLQVSI------YGEHAYPATVARFSPNGEWIASADVS-----GTVRIWG 85 (609)
Q Consensus 26 ~~~~~l~~~~---~---~~~~i~~~~---~~~~~~~------~~~h~~~v~~~~~sp~g~~las~~~d-----~~i~vWd 85 (609)
|+|+.++|.. + ..+.+.+.. ++..... -.+|...+..++|||||++||.++.+ .+|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 7787777652 2 233344443 3333221 12344468899999999999976543 3699999
Q ss_pred CCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCc---------ceEEEEEcCCCCe----eEEEe--cCCccEEE
Q 007283 86 AHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGK---------SLVRAFMWDSGTN----VGEFD--GHSRRVLS 150 (609)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~--~h~~~v~~ 150 (609)
+.+++.+.. ......+..++|||| +.|+.+..+... ...+++.|+.+.. ...+. .+...+..
T Consensus 196 l~tg~~~~~--~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 196 VADGKPLAD--ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp TTTCCEEEE--EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCCc--cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 998875432 112223468899999 999888754431 0123455554321 22233 33346889
Q ss_pred EEEeeCCCeEEEEecC----CCeEEEEeCCCC--ceeeeccCcccceEEEEEcCCCCEEEEEeCC----CcEEEEeCCCC
Q 007283 151 CAFKPSRPFRIATCGE----DFLVNFYEGPPF--KFKLSHRGHSNFVNCVRFSPDGSKFISVSSD----KKGIIYDGKTA 220 (609)
Q Consensus 151 ~~~~p~~~~~i~t~~~----d~~i~~~~~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d----~~i~iwd~~~~ 220 (609)
+.|+|+|..++.+... ...+.+|+...+ +....+..+...+... ++|+|+.|+..+.+ +.+.+||..++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 9999999875554432 347888886554 3122333444444444 34899988888764 45899998774
Q ss_pred c-cccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 221 D-KIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 221 ~-~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
. ....+. ..+...+..+.|+ ++.++++...|+..++|.+.
T Consensus 352 ~~~~~~l~--~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVV--PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEE--CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEe--cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2 333332 2344557778887 56678888889988888654
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.36 E-value=6.9e-10 Score=108.38 Aligned_cols=241 Identities=7% Similarity=0.004 Sum_probs=158.2
Q ss_pred eeEEeecCCCCeEEEe-CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEe
Q 007283 19 GILISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFR 97 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~ 97 (609)
+..+.... +...+.. .++.+.++|..+++.+..+. .......++++|+|++.++...++.|.+||..+.+... .+.
T Consensus 46 ~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~-~i~ 122 (328)
T 3dsm_A 46 AQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG-YIE 122 (328)
T ss_dssp EEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE-EEE
T ss_pred ceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE-EEE
Confidence 34555543 3333333 35799999999988876664 34568899999999766666589999999998876432 333
Q ss_pred ecc-----cceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC-----
Q 007283 98 VLS-----GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED----- 167 (609)
Q Consensus 98 ~~~-----~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d----- 167 (609)
... .....+++ ++.+|.++..+. ...+.+++.++++....+... .....++++|++.. ++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~--~~~~lyv~~~~~-~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l-~v~~~~~~~~~~ 197 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ--YGKYVYVNCWSY-QNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKM-WTITDGGYEGSP 197 (328)
T ss_dssp CTTCCTTTCBCCCEEE--ETTEEEEEECTT-CCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEE-EEEBCCBCTTCS
T ss_pred cCCccccCCCcceEEE--ECCEEEEEcCCC-CCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCE-EEEECCCccCCc
Confidence 222 14566777 455555554321 124567777777666665532 23467889999874 5555443
Q ss_pred -----CeEEEEeCCCCceeeeccC-cccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEE
Q 007283 168 -----FLVNFYEGPPFKFKLSHRG-HSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSW 241 (609)
Q Consensus 168 -----~~i~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~ 241 (609)
+.+.++|..+.+....+.- .......++|+||++.|.++.. .+.+||..+++..... ...........+++
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~-~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRP-FLEFRDTKYYGLTV 274 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSC-SBCCCSSCEEEEEE
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeee-eecCCCCceEEEEE
Confidence 6899999888776544421 1235789999999998877654 8999999887753211 11112356889999
Q ss_pred CC-CCCeEEEE----eCCCcEEEeecccCCCCceEEEe
Q 007283 242 SP-DGKQVLTA----SADKSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 242 sp-d~~~l~s~----s~d~~i~iwd~~~~~~~~~~~~~ 274 (609)
+| ++.++++. ..++.|.+||.. ++.+..+
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~----g~~~~~i 308 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ----GKLIDEF 308 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT----CCEEEEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC----CCEEEEE
Confidence 99 55566665 568899999975 4455444
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.34 E-value=1.5e-09 Score=107.48 Aligned_cols=233 Identities=11% Similarity=0.049 Sum_probs=143.2
Q ss_pred ecCCCCeEEEeCC--C----EEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe----------CCCcEEEEcCC
Q 007283 24 GHPKSNSILYTNG--R----SVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD----------VSGTVRIWGAH 87 (609)
Q Consensus 24 ~~~~~~~l~~~~~--~----~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~----------~d~~i~vWd~~ 87 (609)
..|++..++..+. . .+.++|..+++.+..+..-..+ .++|||||++|+.+. .+++|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3477765544442 2 7899999988876655433333 899999999998775 36789999998
Q ss_pred CCceeeEEEeec-------ccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEE-EecCCccEEEEEEeeCCCe
Q 007283 88 NDHVLKKEFRVL-------SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGE-FDGHSRRVLSCAFKPSRPF 159 (609)
Q Consensus 88 ~~~~~~~~~~~~-------~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~ 159 (609)
+.+... .+... ......++|||||++|+++.... ...+.+++ ++++.+.. +.-. . ++.+.|++..
T Consensus 106 t~~~~~-~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~ 178 (373)
T 2mad_H 106 TFLPIA-DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPS 178 (373)
T ss_pred CCcEEE-EEECCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCc
Confidence 765433 22211 12345789999999999876432 12356677 77666555 4311 1 1223344333
Q ss_pred EEEEecCCCeEEEEeCCCCcee--------------------------------------------------eecc--C-
Q 007283 160 RIATCGEDFLVNFYEGPPFKFK--------------------------------------------------LSHR--G- 186 (609)
Q Consensus 160 ~i~t~~~d~~i~~~~~~~~~~~--------------------------------------------------~~~~--~- 186 (609)
.+++...|+.+.+++. .++.. ..+. .
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 3333333443333332 11111 0000 0
Q ss_pred -------cccceEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eE
Q 007283 187 -------HSNFVNCVRFSPDGSKFISVSS----------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QV 248 (609)
Q Consensus 187 -------h~~~v~~l~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l 248 (609)
.......+.++||++.+..+.. ++.|.++|..+.+.+.++.. .....++.|+|||+ ++
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~----g~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL----GHDVDAISVAQDGGPDL 333 (373)
T ss_pred cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC----CCCcCeEEECCCCCeEE
Confidence 0111233778999887766543 35799999999988777732 23578999999999 77
Q ss_pred EEEe-CCCcEEEeecccCCCCceEEE
Q 007283 249 LTAS-ADKSAKVWDISEDNHGKLKKT 273 (609)
Q Consensus 249 ~s~s-~d~~i~iwd~~~~~~~~~~~~ 273 (609)
+++. .++.|.++|+. .++..+.
T Consensus 334 ~v~~~~~~~V~ViD~~---t~~vv~~ 356 (373)
T 2mad_H 334 YALSAGTEVLHIYDAG---AGDQDQS 356 (373)
T ss_pred EEEcCCCCeEEEEECC---CCCEEee
Confidence 7776 58999999987 3455544
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.34 E-value=8.9e-11 Score=128.36 Aligned_cols=241 Identities=12% Similarity=0.045 Sum_probs=153.7
Q ss_pred ceeEEeecCCCCeEEEeC---C---CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCc-----------
Q 007283 18 RGILISGHPKSNSILYTN---G---RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGT----------- 80 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~---~---~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~----------- 80 (609)
....++++|||+.|+|.. | ..+.++|+.+++.+.. ..+...+..++|+|| +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 344788999999999863 3 2699999998876542 222222467899999 99998776654
Q ss_pred ---EEEEcCCCCcee-eEEEeec--ccceeEEEECCCCCEEEEEECCC--CcceEEEEEcCCC--CeeEEEecCCccEEE
Q 007283 81 ---VRIWGAHNDHVL-KKEFRVL--SGRIDDLQWSPDGLRIVACGDGK--GKSLVRAFMWDSG--TNVGEFDGHSRRVLS 150 (609)
Q Consensus 81 ---i~vWd~~~~~~~-~~~~~~~--~~~v~~~~~spdg~~l~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~h~~~v~~ 150 (609)
|.+|++.++... ...+... ...+..+.|||||++|+...... ....+.+++.+.+ .....+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 889998765421 1122222 23478999999999988776432 2234445554444 214455555555544
Q ss_pred EEEeeCCCeEEEEecC---CCeEEEEeCCCC--ceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCcccc
Q 007283 151 CAFKPSRPFRIATCGE---DFLVNFYEGPPF--KFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGK-TADKIG 224 (609)
Q Consensus 151 ~~~~p~~~~~i~t~~~---d~~i~~~~~~~~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~-~~~~~~ 224 (609)
.. +|++..++..... +..+..|+.... .....+.++...+..+.++ ++.++++...|+...||... +++...
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 43 4787764444332 456888887653 3333444555567778887 55677888889887777543 344343
Q ss_pred ccCcCCCCccceEEEEECCCCCeEEEE----eCCCcEEEeeccc
Q 007283 225 ELSPEDGHKGSVYAVSWSPDGKQVLTA----SADKSAKVWDISE 264 (609)
Q Consensus 225 ~~~~~~~h~~~V~~l~~spd~~~l~s~----s~d~~i~iwd~~~ 264 (609)
.+. ..+.+.|..+.++|++..|+.. ...++++.||+..
T Consensus 400 ~l~--~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 400 AVS--LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp ECB--CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred ecc--CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 332 1235678999999998866522 2347899999863
No 201
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=1.7e-09 Score=105.44 Aligned_cols=224 Identities=12% Similarity=0.039 Sum_probs=147.3
Q ss_pred eeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEE
Q 007283 19 GILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEF 96 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~ 96 (609)
+-...++|+++.+++.+ ++.+..|+..+++... +. +...+.+++++|+|+++++. .+ .|.+||..+++.. .+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~--~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT--LH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE--EE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE--EE
Confidence 34677899877776653 5789999987765432 32 34579999999999988865 33 4999998776532 12
Q ss_pred eec-----ccceeEEEECCCCCEEEEEECC-CCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeE
Q 007283 97 RVL-----SGRIDDLQWSPDGLRIVACGDG-KGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLV 170 (609)
Q Consensus 97 ~~~-----~~~v~~~~~spdg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i 170 (609)
... ...+..++++|+|+.+++.... .......++.++ ......+..+......++|+|++..++++...++.|
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 211 2357899999999877654321 111123455555 333333333334567899999998666666777889
Q ss_pred EEEeCC--CC-ce-----eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEEC
Q 007283 171 NFYEGP--PF-KF-----KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWS 242 (609)
Q Consensus 171 ~~~~~~--~~-~~-----~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~s 242 (609)
..|+.. .+ +. ...+.........+++.++|.++++...++.|..|+. +++.+..+. .+...+++++|+
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~---~~~~~~~~~af~ 279 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE---VPGKQTTCPAFI 279 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE---CSCSBEEEEEEE
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE---CCCCCcEEEEEe
Confidence 999864 44 21 1223333455678999999987777667788999998 555554442 244569999998
Q ss_pred -CCCCeEEEEeC
Q 007283 243 -PDGKQVLTASA 253 (609)
Q Consensus 243 -pd~~~l~s~s~ 253 (609)
|++..|+.++.
T Consensus 280 g~d~~~L~vt~~ 291 (326)
T 2ghs_A 280 GPDASRLLVTSA 291 (326)
T ss_dssp STTSCEEEEEEB
T ss_pred cCCCCEEEEEec
Confidence 88876655443
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.32 E-value=2.6e-08 Score=95.61 Aligned_cols=236 Identities=7% Similarity=-0.088 Sum_probs=158.7
Q ss_pred cCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCcccc-ccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceee
Q 007283 16 RGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVS-IYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~ 93 (609)
...|..+..+++|+..+... ++.+.+++.. ++... .+..+...+..++++|+|++.++...++.|..+|.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 34778999999998766654 5789999987 44332 122334578999999999988887778899999977 44322
Q ss_pred EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE--ecCCccEEEEEEeeCCCeEEEEecCCCeEE
Q 007283 94 KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF--DGHSRRVLSCAFKPSRPFRIATCGEDFLVN 171 (609)
Q Consensus 94 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~ 171 (609)
.........+..+++.|+|+.+++...+. . ++.++.......+ ......+..+++.|++. ++++...++.+.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~---~--i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~ 170 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGD---R--IGKLTADGTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIG 170 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTT---E--EEEECTTSCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEE
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCC---e--EEEECCCCCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEE
Confidence 22222335688999999998776643221 2 3333332222222 33446788999999987 466666667788
Q ss_pred EEeCCCCceee-eccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEE
Q 007283 172 FYEGPPFKFKL-SHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLT 250 (609)
Q Consensus 172 ~~~~~~~~~~~-~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s 250 (609)
.++. .++... ....+...+..+++.++|.++++....+.+.+++. +++..... ...+...+.++++.++|++.++
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~--~~~~~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD--IPTPNARPHAITAGKNSEIWFT 246 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE--CSSTTCCEEEEEECSTTCEEEE
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE--CCCCCCCceEEEECCCCCEEEe
Confidence 8876 343322 23344567889999999987776666778999997 44432211 1123456889999999997777
Q ss_pred EeCCCcEEEeecc
Q 007283 251 ASADKSAKVWDIS 263 (609)
Q Consensus 251 ~s~d~~i~iwd~~ 263 (609)
...++.|..|+..
T Consensus 247 ~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 247 EWGANQIGRITND 259 (300)
T ss_dssp ETTTTEEEEECTT
T ss_pred ccCCCeEEEECCC
Confidence 7667899999873
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.32 E-value=1.5e-08 Score=100.35 Aligned_cols=106 Identities=9% Similarity=-0.057 Sum_probs=71.8
Q ss_pred eCCCeEEEEec-CCC---eEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCC
Q 007283 155 PSRPFRIATCG-EDF---LVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS----------SDKKGIIYDGKTA 220 (609)
Q Consensus 155 p~~~~~i~t~~-~d~---~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~----------~d~~i~iwd~~~~ 220 (609)
|++...+++-+ ... .+.++|..+++....+.....+ .++|+|||+++..+. .++.+.++|..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 55554444432 222 7888998888776655433333 899999999888775 3678999999887
Q ss_pred ccccccCcC-CCC---ccceEEEEECCCCCeEEEEeC--CCcEEEeecc
Q 007283 221 DKIGELSPE-DGH---KGSVYAVSWSPDGKQVLTASA--DKSAKVWDIS 263 (609)
Q Consensus 221 ~~~~~~~~~-~~h---~~~V~~l~~spd~~~l~s~s~--d~~i~iwd~~ 263 (609)
+.+..+... ... ...-..+.|+|||++|+.+.. ++.|.++| .
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~ 155 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q 155 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C
Confidence 766554321 000 112347899999999998874 47899998 6
No 204
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.26 E-value=7e-06 Score=90.37 Aligned_cols=486 Identities=8% Similarity=0.042 Sum_probs=257.1
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCC-C---CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceee
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHA-Y---PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~-~---~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~ 93 (609)
....|...++|...+.+. +.+..||..+.+-.. +..+. . .|.++...++|++.+... +.+..|+..+++...
T Consensus 89 ~I~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~-~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~~~~ 164 (795)
T 4a2l_A 89 ISRIVKTDSQGRVWIGTR-DGLSRYDEEKDIFQN-FFYEKNGKHLQVNGIEEISPEQLLISTP--EGLIMFDIKESKFID 164 (795)
T ss_dssp CEEEEEECTTSCEEEEES-SCEEEEETTTTEEEE-ECCEETTEECCCCEEEEEETTEEEEEET--TEEEEEETTTTEEEC
T ss_pred ceeEEEECCCCCEEEEeC-CchheeCCCCCeEEe-ccccccCCCceEEEEEECCCCCEEEEEC--CceEEEECCCCEEEe
Confidence 344777888887666655 347889986654322 22111 1 188999999999877654 458889876654211
Q ss_pred EEEeecccc-eeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEE-EecCCccEEEEEEeeCCCeEEEEecCCCeEE
Q 007283 94 KEFRVLSGR-IDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGE-FDGHSRRVLSCAFKPSRPFRIATCGEDFLVN 171 (609)
Q Consensus 94 ~~~~~~~~~-v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~ 171 (609)
......... |.++...++|...+...+ .+ +..++...+..... ...+...|.++...+++.. .+ +..+.-+.
T Consensus 165 ~~~~~~~~~~i~~i~~d~~g~lwigt~~-~G---l~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-wi-gt~~~Gl~ 238 (795)
T 4a2l_A 165 DSFSTAMHKTIASTLYRQGDQIYIGTST-DG---LYTYSITQKTFEKVIPILGTKQIQAILQQSPTRI-WV-ATEGAGLF 238 (795)
T ss_dssp SSSCHHHHTCCEEEEEEETTEEEEEESS-SC---EEEEETTTCCEEECC----CCCEEEEEEEETTEE-EE-EEBSSCEE
T ss_pred ccCCCCCCcceEEEEECCCCCEEEEECC-CC---EEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCE-EE-EECCCCeE
Confidence 000001123 888888888876665422 22 22233223322111 0123456888888888763 33 33332367
Q ss_pred EEeCCCCceeeeccC-------cccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccC----cCCCCccceEEEE
Q 007283 172 FYEGPPFKFKLSHRG-------HSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELS----PEDGHKGSVYAVS 240 (609)
Q Consensus 172 ~~~~~~~~~~~~~~~-------h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~h~~~V~~l~ 240 (609)
.|+....+...-... ....|.++...++|.+. .|+.+ -+.+|+..++....... ...-....|.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 316 (795)
T 4a2l_A 239 LINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW-IGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIF 316 (795)
T ss_dssp EEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE-EEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEE
T ss_pred EEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE-EEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEE
Confidence 777665443322111 23569999999998754 45555 58889877654322110 0011235799999
Q ss_pred ECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCC-CCCc-cceEEEEEE-cCCeEEEEEcCCcEEEEeCCCCCCCc
Q 007283 241 WSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSG-SGGV-DDMLVGCLW-QNDFLVIVSLGGTISIFSANDLEKSP 317 (609)
Q Consensus 241 ~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~-~~~~~~~~~~~g~i~~~~~~~~~~~~ 317 (609)
..++|.+. .|+.++-|..++.... .. ..+.... .... ...+.+... .+..+.+++.++.+..|+..... .
T Consensus 317 ~D~~g~lW-igt~~~Gl~~~~~~~~---~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~--~ 389 (795)
T 4a2l_A 317 MDSQGGMW-LGTYFGGLNYYHPIRN---RF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQR--F 389 (795)
T ss_dssp ECTTSCEE-EEESSSCEEEECGGGG---SS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCC--E
T ss_pred EeCCcCEE-EEECCCCeEEeCCCcc---cc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCc--E
Confidence 99988754 4566677888886532 11 1221111 1111 122233332 34567778887778888754321 1
Q ss_pred eeee---------CCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc----ccccceeEeeee-CCcEEEE
Q 007283 318 LQLS---------GHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR----KENSQIKCFAAI-EEEIVTS 383 (609)
Q Consensus 318 ~~~~---------~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~ 383 (609)
..+. .....|.++... .++.++..|+.++-+..++...+....... .....+.++... .+.+..+
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVD-EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEE-TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEc-CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 1111 123467777654 334436667776778888765443222211 011123333322 2233333
Q ss_pred eccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEcCCCCEEE
Q 007283 384 GFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAI 463 (609)
Q Consensus 384 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~g~~l~ 463 (609)
.. .-+.+++....... .+........ .....+.++...++|+..+
T Consensus 469 t~-~Gl~~~~~~~~~~~---------------------------------~~~~~~~~~~-~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 469 TL-SALVRFNPEQRSFT---------------------------------TIEKEKDGTP-VVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp ES-SCEEEEETTTTEEE---------------------------------ECCBCTTCCB-CCCCCEEEEEECTTCCEEE
T ss_pred ec-CceeEEeCCCCeEE---------------------------------Eccccccccc-cCCceEEEEEECCCCCEEE
Confidence 33 22333332211000 0000000000 0013467788888898766
Q ss_pred EEeCCCcEEEEEecCCeeeeeE---E-EecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe-eec-CCCCce
Q 007283 464 IGSQDGKLRVYSIRGDTLTEEA---V-LEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK-NML-YHTARI 537 (609)
Q Consensus 464 ~gs~dg~i~iw~~~~~~~~~~~---~-~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~-~~~-~h~~~i 537 (609)
.. . +-|..|+..++.. ... . .......|.++...++|.+.++.. . -+..||..+.....- ... .....|
T Consensus 514 gt-~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~i 588 (795)
T 4a2l_A 514 GG-E-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNVV 588 (795)
T ss_dssp EE-S-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSCE
T ss_pred Ee-C-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhhe
Confidence 55 4 5588888876554 100 0 011335789999999998776554 3 578888766543211 111 124568
Q ss_pred EEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 538 NCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 538 ~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
.++...++|++.++. ++-|..|+...
T Consensus 589 ~~i~~d~~g~lWi~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 589 YGILEDSFGRLWLST--NRGISCFNPET 614 (795)
T ss_dssp EEEEECTTSCEEEEE--TTEEEEEETTT
T ss_pred EEEEECCCCCEEEEc--CCceEEEcCCC
Confidence 999999999876655 34577787654
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.26 E-value=1.6e-10 Score=113.53 Aligned_cols=177 Identities=7% Similarity=-0.052 Sum_probs=128.9
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCc---------eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEE
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDH---------VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRA 129 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~---------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 129 (609)
+++.+++++.+.++++|+.+ .+++|+...-+ ........+.. |..++| |+..|+++.+ ..+++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~----~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTR----NALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEES----SEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcC----CcEEE
Confidence 69999999999999999987 46679765322 11111223555 999999 9988888732 24677
Q ss_pred EEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCC
Q 007283 130 FMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSD 209 (609)
Q Consensus 130 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 209 (609)
|+.+.-........|...+.++.+.+. . ++++..|+.+.+|+...+.... +...|+|++|||+| ++.|..|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 776655455556677777887765543 3 8888999999999988766542 45689999999999 6789999
Q ss_pred CcEEEEeCCCCcc--ccccC------cCCCCccceEEEEECCCCCeEEEEe
Q 007283 210 KKGIIYDGKTADK--IGELS------PEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 210 ~~i~iwd~~~~~~--~~~~~------~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
|++.+|+...++. ...+. ...+|...|.++.|.+++.++++=+
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 9999998776653 22231 1114778899999999998887643
No 206
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.25 E-value=5.8e-09 Score=101.92 Aligned_cols=282 Identities=15% Similarity=0.086 Sum_probs=167.9
Q ss_pred EeeCCCeEEEEecC----CCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe----------CCCcEEEEeCC
Q 007283 153 FKPSRPFRIATCGE----DFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS----------SDKKGIIYDGK 218 (609)
Q Consensus 153 ~~p~~~~~i~t~~~----d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~----------~d~~i~iwd~~ 218 (609)
..|++..++++-.. ++.+.+.|..+++.......-..+ . ++++|||+++.++. .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 35787765655443 678999999988877665433333 3 99999999877665 36789999999
Q ss_pred CCccccccCcCCCC----ccceEEEEECCCCCeEEEEeC--CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEc
Q 007283 219 TADKIGELSPEDGH----KGSVYAVSWSPDGKQVLTASA--DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQ 292 (609)
Q Consensus 219 ~~~~~~~~~~~~~h----~~~V~~l~~spd~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (609)
+.+.+..+....+. ...-..+.|+|||++++.+.. ++.|.++|+. .++...++...+ |
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~---t~~vv~tI~v~g----------~--- 181 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE---GKAFKRMLDVPD----------C--- 181 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT---TTEEEEEEECCS----------E---
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC---CCcEEEEEECCC----------c---
Confidence 98877665321100 112346899999999888763 6899999987 344544442110 0
Q ss_pred CCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeE
Q 007283 293 NDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKC 372 (609)
Q Consensus 293 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~ 372 (609)
... .+...+.+++.+.||++.+.+....... ... ..
T Consensus 182 ------------------------------------~~~-~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~-~~----- 217 (386)
T 3sjl_D 182 ------------------------------------YHI-FPTAPDTFFMHCRDGSLAKVAFGTEGTP-EIT-HT----- 217 (386)
T ss_dssp ------------------------------------EEE-EEEETTEEEEEETTSCEEEEECCSSSCC-EEE-EC-----
T ss_pred ------------------------------------cee-ecCCCceeEEECCCCCEEEEECCCCCeE-EEe-ec-----
Confidence 000 1112245567777777766654321000 000 00
Q ss_pred eeeeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCce-e
Q 007283 373 FAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPV-T 451 (609)
Q Consensus 373 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 451 (609)
+ .++. . ..++ .
T Consensus 218 ---------------~--~~~~------------------------~---------------------------~~~~~~ 229 (386)
T 3sjl_D 218 ---------------E--VFHP------------------------E---------------------------DEFLIN 229 (386)
T ss_dssp ---------------C--CCSC------------------------T---------------------------TSCBCS
T ss_pred ---------------c--eecc------------------------c---------------------------cccccc
Confidence 0 0000 0 0000 0
Q ss_pred EEEE-cCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEe---------c-CCCceEEEEECCCCCEEEEEeC---------
Q 007283 452 ASAI-APDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLE---------K-HRGAVSVIRYSPDVSMFASGDV--------- 511 (609)
Q Consensus 452 ~~~~-sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~---------~-h~~~i~~v~~s~~~~~l~s~s~--------- 511 (609)
..++ .++|+++. .+.+|+|++.|+.++......... + ..+....++++|++..+.....
T Consensus 230 ~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 230 HPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp CCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred cceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 1123 46776544 556899999998765421111111 0 1223345777899887776543
Q ss_pred -CCeEEEEEccCCceEEeeecCCCCceEEEEECCCCc-EEEEE-eCCCeEEEEEcCCCC
Q 007283 512 -NREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNS-MVATG-SLDTCVIIYEIDKPA 567 (609)
Q Consensus 512 -d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~-~l~s~-s~D~~v~vw~~~~~~ 567 (609)
..+|.+.|..+.+.......+ .+++.|+|+||++ +|++. ..+++|.++|..+.+
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 257999998887664333233 3788999999997 66665 459999999987644
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=4.3e-09 Score=105.83 Aligned_cols=236 Identities=10% Similarity=-0.007 Sum_probs=151.8
Q ss_pred ceeEEeecCCCCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCC--cEEEEcCCCCceeeE
Q 007283 18 RGILISGHPKSNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSG--TVRIWGAHNDHVLKK 94 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~--~i~vWd~~~~~~~~~ 94 (609)
.|..++++|+|+.++... ++.|.++|+.++........... .. ++|+|+|++|+.++.++ .|.+|+...+... .
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~-~ 208 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP-T 208 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE-E
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee-E
Confidence 678899999998555544 47999999987766554443222 33 99999999998888766 6777777654321 1
Q ss_pred EE----eecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-----ecCCccE-E-EEEEeeCCCeEEEE
Q 007283 95 EF----RVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-----DGHSRRV-L-SCAFKPSRPFRIAT 163 (609)
Q Consensus 95 ~~----~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v-~-~~~~~p~~~~~i~t 163 (609)
.+ ......+..++++|++.+|.. .+.. ..++.++.+.+.. ..+ .++...- . .++|+|++..++++
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~--~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYF-VDSN--KNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEE-ECTT--CEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEE-EECC--CcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 22 113356788999995545555 3332 2344445444432 222 1222222 2 89999976666777
Q ss_pred ecCCCeEEEEeCCCCceeeeccCc---------------ccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccC
Q 007283 164 CGEDFLVNFYEGPPFKFKLSHRGH---------------SNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELS 227 (609)
Q Consensus 164 ~~~d~~i~~~~~~~~~~~~~~~~h---------------~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~ 227 (609)
-..++.|..|+.... . ..+.++ ......++|+|+|+++++-. .+..|+.|+..++.......
T Consensus 285 d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp ETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEE
T ss_pred eCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeC
Confidence 777888888875432 1 111121 24578999999999777777 78899999966665321110
Q ss_pred c--CC---------CCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 228 P--ED---------GHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 228 ~--~~---------~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
. .. ..-.....++++|+|.++++-..++.|+.+++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0 00 01235789999999988888888888887764
No 208
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=3.2e-09 Score=100.43 Aligned_cols=199 Identities=10% Similarity=-0.089 Sum_probs=133.3
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEe
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFR 97 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~ 97 (609)
.|..+.++|+|+.++...++.+.+|+..+................++++|+|++.++...++.|.+|+..+...... ..
T Consensus 68 ~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~ 146 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-PF 146 (270)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-CC
T ss_pred CcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee-cc
Confidence 56678899999866655567899999876554332222335689999999999888877888999997654332111 11
Q ss_pred ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCC
Q 007283 98 VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPP 177 (609)
Q Consensus 98 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~ 177 (609)
.....+..++++|+|+.+++...+. .+..++.+..........+...+..++++|++. ++++...++.+..|+...
T Consensus 147 ~~~~~p~~i~~~~~g~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 147 TGLNDPDGVAVDNSGNVYVTDTDNN---RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CSCCSCCCEEECTTCCEEEEEGGGT---EEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTC
T ss_pred ccCCCceeEEEeCCCCEEEEECCCC---EEEEEecCCCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCC
Confidence 1223578899999998665543221 234444333332222223336688999999985 566666778889998755
Q ss_pred CceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 007283 178 FKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTAD 221 (609)
Q Consensus 178 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~ 221 (609)
.........+...+.+++++|+|+++++...++.|.+++....+
T Consensus 223 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 223 TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 43333333344678999999999988888889999999866543
No 209
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.19 E-value=1.4e-05 Score=87.83 Aligned_cols=516 Identities=8% Similarity=0.040 Sum_probs=270.4
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCcccccccc--------CCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCC
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGE--------HAYPATVARFSPNGEWIASADVSGTVRIWGAHND 89 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~--------h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~ 89 (609)
....|..+++|..-+.+. .-+..||..+ ...+.. -...|.++...++|++-+... +.+..||..+.
T Consensus 44 ~v~~I~qD~~G~lWigT~-~GL~ryDG~~---f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~--~Gl~~yd~~~~ 117 (795)
T 4a2l_A 44 TVFSIDQDKRGNMWFATY-DGVNKYDGYA---FTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTR--DGLSRYDEEKD 117 (795)
T ss_dssp CEEEEEECTTSCEEEEET-TEEEEECSSC---EEEECCCTTCTTSCSCSCEEEEEECTTSCEEEEES--SCEEEEETTTT
T ss_pred eeEEEEEcCCCCEEEeec-CcCcccCCCc---eEEEeCCCCCCCcccccceeEEEECCCCCEEEEeC--CchheeCCCCC
Confidence 455788888885433333 3466777533 222221 134699999999999877553 44888998765
Q ss_pred ceeeEEEeecc-c---ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEe-cC-Ccc-EEEEEEeeCCCeEEE
Q 007283 90 HVLKKEFRVLS-G---RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD-GH-SRR-VLSCAFKPSRPFRIA 162 (609)
Q Consensus 90 ~~~~~~~~~~~-~---~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h-~~~-v~~~~~~p~~~~~i~ 162 (609)
+.. .+.... . .|.++...++|...+++. .+ +..++-+++. ...+. ++ ... |.++...+++.. .+
T Consensus 118 ~f~--~~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~g---l~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~l-wi 188 (795)
T 4a2l_A 118 IFQ--NFFYEKNGKHLQVNGIEEISPEQLLISTP--EG---LIMFDIKESK-FIDDSFSTAMHKTIASTLYRQGDQI-YI 188 (795)
T ss_dssp EEE--EECCEETTEECCCCEEEEEETTEEEEEET--TE---EEEEETTTTE-EECSSSCHHHHTCCEEEEEEETTEE-EE
T ss_pred eEE--eccccccCCCceEEEEEECCCCCEEEEEC--Cc---eEEEECCCCE-EEeccCCCCCCcceEEEEECCCCCE-EE
Confidence 432 122111 1 188888888987666543 11 2223322221 11111 11 123 888888888753 33
Q ss_pred EecCCCeEEEEeCCCCceeeec-cCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCc----CCCCccceE
Q 007283 163 TCGEDFLVNFYEGPPFKFKLSH-RGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSP----EDGHKGSVY 237 (609)
Q Consensus 163 t~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~----~~~h~~~V~ 237 (609)
+..++-+..|+....+..... ..+...|.++...++|.++ .++.++.+..||..+++....... ..-....|.
T Consensus 189 -gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 266 (795)
T 4a2l_A 189 -GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIR 266 (795)
T ss_dssp -EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEE
T ss_pred -EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEE
Confidence 444434677776554443221 1234568888888888654 455555588899776543221110 001235699
Q ss_pred EEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccCC--CCCcc-ceEEEEEE-cCCeEEEEEcCCcEEEEeCCCC
Q 007283 238 AVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSG--SGGVD-DMLVGCLW-QNDFLVIVSLGGTISIFSANDL 313 (609)
Q Consensus 238 ~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~-~~~~~~~~~~~g~i~~~~~~~~ 313 (609)
++...++|.+.+.. .+ -|.+|+... ++ ...+.... ..... ..+..... ....+.+++.++.+..++....
T Consensus 267 ~i~~d~~g~lWigt-~~-Gl~~~~~~~---~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 267 SLAMDSQNRLWIGT-FN-DLNIYHEGT---DS-FASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp EEEECTTSCEEEEE-SS-CEEEEETTT---TE-EEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG
T ss_pred EEEEcCCCCEEEEe-CC-hhheEcCCC---Ce-EEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc
Confidence 99999888765543 44 588888652 22 22222111 11111 12222222 3456777777777777764321
Q ss_pred CCCceeee-------CCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccc--------cccceeEeeee-C
Q 007283 314 EKSPLQLS-------GHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRK--------ENSQIKCFAAI-E 377 (609)
Q Consensus 314 ~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~--------~~~~~~~~~~~-~ 377 (609)
. ...+. .....|.++.... + ..+..|+.++-+..++...+........ ....+.++..+ .
T Consensus 341 ~--~~~~~~~~~~~~l~~~~V~~i~~d~-~-g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 341 R--FKNIRNIPYKNSLSDNVVSCIVEDK-D-KNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp S--SEEECCCTTSSSCSCSSEEEEEECT-T-SCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT
T ss_pred c--ceEEcCCCCCCCCCCCeeEEEEECC-C-CCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 1 11110 1234577776533 3 3456677777788887654322221110 01223333332 3
Q ss_pred Cc-EEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCceeEEEEc
Q 007283 378 EE-IVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIA 456 (609)
Q Consensus 378 ~~-~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 456 (609)
+. +..+..++-+.+++........ +..... . .....+.++...
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~---------------------------------~~~~~~--~-l~~~~v~~i~~d 460 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVEN---------------------------------FNQRNS--Q-LVNENVYAILPD 460 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEE---------------------------------ECTTTS--C-CSCSCEEEEEEC
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEE---------------------------------eecCCC--C-cCCCeeEEEEEC
Confidence 33 4555444444444432211000 000000 0 011346777788
Q ss_pred CCCCEEEEEeCCCcEEEEEecCCeeeeeEEE----ecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe----
Q 007283 457 PDGSEAIIGSQDGKLRVYSIRGDTLTEEAVL----EKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK---- 528 (609)
Q Consensus 457 p~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~----~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~---- 528 (609)
++|.+++.. . +-|..|+..++........ .-....|.++...++|.+.+... +-+..||..+......
T Consensus 461 ~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~ 536 (795)
T 4a2l_A 461 GEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDIQKASILP 536 (795)
T ss_dssp SSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEEEECCCSC
T ss_pred CCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeEEEecCCC
Confidence 888865554 4 4588888766554321110 11235789999999998777654 4588888765543111
Q ss_pred eecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEec--c-ccCCeEEEEEc-CCCeEEEEeCCCcEEEE
Q 007283 529 NMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKG--A-HLGGVYGLAFT-DEHSVVSSGEDACVRVW 604 (609)
Q Consensus 529 ~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~--~-h~~~v~~~~~s-~~~~l~s~s~D~~i~~W 604 (609)
....+...|.++...++|++.++. .. -|..||..... ...... + ....|.++... +++..+++ . +-+..|
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~--~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~ 610 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQ--IKRYNTTNGLPNNVVYGILEDSFGRLWLST-N-RGISCF 610 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTE--EEEECGGGTCSCSCEEEEEECTTSCEEEEE-T-TEEEEE
T ss_pred CCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCc--EEEeCCCCCCchhheEEEEECCCCCEEEEc-C-CceEEE
Confidence 001244579999999999866544 33 47778865422 111111 1 23458888877 55655554 3 345555
Q ss_pred Ec
Q 007283 605 RL 606 (609)
Q Consensus 605 ~~ 606 (609)
+.
T Consensus 611 ~~ 612 (795)
T 4a2l_A 611 NP 612 (795)
T ss_dssp ET
T ss_pred cC
Confidence 43
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.19 E-value=6.9e-08 Score=93.41 Aligned_cols=115 Identities=13% Similarity=0.179 Sum_probs=79.8
Q ss_pred eEEEEc----CCCCEEE-EEeCCCcEEEEEec-CCeeeeeE---EEecCC-CceEEEEECCCCCEEEEEeCCCeEEEEEc
Q 007283 451 TASAIA----PDGSEAI-IGSQDGKLRVYSIR-GDTLTEEA---VLEKHR-GAVSVIRYSPDVSMFASGDVNREAIVWDR 520 (609)
Q Consensus 451 ~~~~~s----p~g~~l~-~gs~dg~i~iw~~~-~~~~~~~~---~~~~h~-~~i~~v~~s~~~~~l~s~s~d~~v~iwd~ 520 (609)
..++++ |+|+.+. +...++.|++|+.+ .+.+.... .+..+. +.+..++++++|.+.++...++.|.+||.
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 345666 8886544 44567889999876 34332211 223333 56888999999999998888899999997
Q ss_pred cCCceEEeeecCCCCceEEEEECCCCcE-EEEEeCCCeEEEEEcCCC
Q 007283 521 VSREVKLKNMLYHTARINCLAWSPNNSM-VATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 521 ~~~~~~~~~~~~h~~~i~~l~~s~d~~~-l~s~s~D~~v~vw~~~~~ 566 (609)
.+++.. ..+..+...+.+++|+||+++ +++...++.|..|++...
T Consensus 255 ~~g~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 255 DGGQPK-MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TCBSCS-EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCcEe-EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 644322 223445678999999999994 455566788999998643
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.19 E-value=3.7e-08 Score=94.52 Aligned_cols=232 Identities=4% Similarity=-0.092 Sum_probs=151.4
Q ss_pred CceeEEeecCCCCeEEEeC-CCEEEEEeCCCCcccc-ccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeE
Q 007283 17 GRGILISGHPKSNSILYTN-GRSVIILDLSNPLQVS-IYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKK 94 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~ 94 (609)
..+..+..+++|+..+... ++.+..+|.. ++... .+......+..++++|+|++.++...++.|..++.. ++....
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc
Confidence 4677888999998766655 4789999987 44322 122234568999999999998888778899999986 443322
Q ss_pred EEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE--ecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 95 EFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF--DGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 95 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
.+......+..+++.|+|+.+++...+. . ++.++.......+ ..+...+..++++|++.. +++....+.+..
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~---~--i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~~~~~i~~ 213 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNN---S--IGRITNTGKLEEYPLPTNAAAPVGITSGNDGAL-WFVEIMGNKIGR 213 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTT---E--EEEECTTCCEEEEECSSTTCCEEEEEECTTSSE-EEEETTTTEEEE
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCC---e--EEEECCCCcEEEeeCCCCCCCcceEEECCCCCE-EEEccCCCEEEE
Confidence 2222345688999999998555543221 2 3334432222223 234456889999998863 555555667888
Q ss_pred EeCCCCceee-eccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 173 YEGPPFKFKL-SHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 173 ~~~~~~~~~~-~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
++. .++... ....+...+.+++++++|+++++...++.|..++. +++.. .+. .......+.++.+.++|++.++.
T Consensus 214 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~-~~~~~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 214 ITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQ-LQTENAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEE-CCSTTCCCCCEEECTTSCEEEEC
T ss_pred EcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEE-CCccCCccceeEeCCCCCEEEEc
Confidence 886 333322 23344567889999999987666666789999997 34322 221 11234568899999999866665
Q ss_pred eCCCcEEEeec
Q 007283 252 SADKSAKVWDI 262 (609)
Q Consensus 252 s~d~~i~iwd~ 262 (609)
. . .|..+|.
T Consensus 290 ~-~-~i~~~~p 298 (300)
T 2qc5_A 290 K-C-KIGKLNL 298 (300)
T ss_dssp S-S-EEEEEEE
T ss_pred c-C-ceEEeCC
Confidence 4 4 6666664
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.18 E-value=3.1e-09 Score=115.01 Aligned_cols=237 Identities=9% Similarity=-0.029 Sum_probs=150.3
Q ss_pred eEEeecCCCCeEEEe---CC---CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCc-------------
Q 007283 20 ILISGHPKSNSILYT---NG---RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGT------------- 80 (609)
Q Consensus 20 ~~~~~~~~~~~l~~~---~~---~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~------------- 80 (609)
..++++|||+.|+|. .| ..++++|+.+++.+.. ..+......++|+ ||+.|+.++.++.
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 366899999999986 23 4789999998875432 1111113577899 9999998877643
Q ss_pred EEEEcCCCCce---eeEEEee-cccceeEEEECCCCCEEEEEEC-CCCcceEEEEEcCCCC-eeEEEecCCccEEEEEEe
Q 007283 81 VRIWGAHNDHV---LKKEFRV-LSGRIDDLQWSPDGLRIVACGD-GKGKSLVRAFMWDSGT-NVGEFDGHSRRVLSCAFK 154 (609)
Q Consensus 81 i~vWd~~~~~~---~~~~~~~-~~~~v~~~~~spdg~~l~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~ 154 (609)
|++|++.++.. +...... +...+..+.|||||++|+.... +.....+.+++.+.+. ....+..+....... ++
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~ 288 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VD 288 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Ee
Confidence 99999877542 2111122 2334678999999998876553 2222244455554442 345566666655554 66
Q ss_pred eCCCeEEEEecCC---CeEEEEeCCCCce--eeeccCcccceEEEEEcCCCCEEEEEeC-CC--cEEEEeCCCCcccccc
Q 007283 155 PSRPFRIATCGED---FLVNFYEGPPFKF--KLSHRGHSNFVNCVRFSPDGSKFISVSS-DK--KGIIYDGKTADKIGEL 226 (609)
Q Consensus 155 p~~~~~i~t~~~d---~~i~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~-d~--~i~iwd~~~~~~~~~~ 226 (609)
+++..+++....+ +.+..++...... ...+..|...+. .|+++++.|+.... ++ .+.+|+...+. ...+
T Consensus 289 ~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l 365 (693)
T 3iuj_A 289 NKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREV 365 (693)
T ss_dssp EETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEE
T ss_pred ccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEe
Confidence 6666555555544 5777888765432 123444555554 89999998876654 43 67888876443 3333
Q ss_pred CcCCCCccceEEEEECCCCCeEEEEeCC----CcEEEeeccc
Q 007283 227 SPEDGHKGSVYAVSWSPDGKQVLTASAD----KSAKVWDISE 264 (609)
Q Consensus 227 ~~~~~h~~~V~~l~~spd~~~l~s~s~d----~~i~iwd~~~ 264 (609)
. ....+.+..+.++|++..++....+ +++..||+..
T Consensus 366 ~--~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 366 A--LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp C--CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred e--cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 2 1234567888889988876655444 7899998863
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=1.7e-08 Score=100.51 Aligned_cols=280 Identities=15% Similarity=0.075 Sum_probs=165.6
Q ss_pred eCCCeEEEEecCC----CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCC
Q 007283 155 PSRPFRIATCGED----FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS----------SDKKGIIYDGKTA 220 (609)
Q Consensus 155 p~~~~~i~t~~~d----~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~----------~d~~i~iwd~~~~ 220 (609)
|+...++++...+ +.+.+.|..+.+....+.--..+ .+.++|||++|.++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4444445555444 68999999998887665433344 799999999877765 3678999999998
Q ss_pred ccccccCcC-CC---CccceEEEEECCCCCeEEEEeC--CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCC
Q 007283 221 DKIGELSPE-DG---HKGSVYAVSWSPDGKQVLTASA--DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQND 294 (609)
Q Consensus 221 ~~~~~~~~~-~~---h~~~V~~l~~spd~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (609)
+.+..+... .. ....-..+.|+|||++++.+.. ++.|.+.|+.. .+....+...+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t---~kvv~~I~v~g---------------- 220 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG---KTFDRMLDVPD---------------- 220 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT---TEEEEEEECCS----------------
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC---CeEEEEEEcCC----------------
Confidence 877665321 00 0112346899999999988764 57899999863 44444332110
Q ss_pred eEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceeccccccceeEee
Q 007283 295 FLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKENSQIKCFA 374 (609)
Q Consensus 295 ~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~~~~~~~~~ 374 (609)
+....+..+..+++.+.||++.+.+...+.....
T Consensus 221 ----------------------------------~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~------------ 254 (426)
T 3c75_H 221 ----------------------------------CYHIFPASPTVFYMNCRDGSLARVDFADGETKVT------------ 254 (426)
T ss_dssp ----------------------------------EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEE------------
T ss_pred ----------------------------------ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEE------------
Confidence 0000111123455555666655443311100000
Q ss_pred eeCCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCeeeEEeccCCc-eeEE
Q 007283 375 AIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFP-VTAS 453 (609)
Q Consensus 375 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 453 (609)
. . ..++. . ..+ ....
T Consensus 255 --------~----~-~~~~v-------------~--------------------------------------~~p~~~~~ 270 (426)
T 3c75_H 255 --------N----T-EVFHT-------------E--------------------------------------DELLINHP 270 (426)
T ss_dssp --------E----C-CCCSC-------------T--------------------------------------TSCBCSCC
T ss_pred --------e----e-eeecc-------------C--------------------------------------CCceeeEe
Confidence 0 0 00000 0 000 1123
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEe---c-------CCCceEEEEECCCCCEEEEEeC----------CC
Q 007283 454 AIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLE---K-------HRGAVSVIRYSPDVSMFASGDV----------NR 513 (609)
Q Consensus 454 ~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~---~-------h~~~i~~v~~s~~~~~l~s~s~----------d~ 513 (609)
.+.|++..++..+..+.|.+.|+.++......... . .......++++||+..+.+... ++
T Consensus 271 ~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~ 350 (426)
T 3c75_H 271 AFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASR 350 (426)
T ss_dssp EECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEE
T ss_pred eecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCC
Confidence 56788887777778889999998654421111110 0 0112223689999876665532 35
Q ss_pred eEEEEEccCCceEEeeecCCCCceEEEEECCCCc-EEEEEe-CCCeEEEEEcCCCC
Q 007283 514 EAIVWDRVSREVKLKNMLYHTARINCLAWSPNNS-MVATGS-LDTCVIIYEIDKPA 567 (609)
Q Consensus 514 ~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~-~l~s~s-~D~~v~vw~~~~~~ 567 (609)
+|.+.|..+.+....... .....+++|+||++ +++++. .+++|.|+|..+.+
T Consensus 351 ~VsVID~~T~kvv~~I~v--g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 351 FVVVLNAETGERINKIEL--GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEEETTTCCEEEEEEE--EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEECCCCeEEEEEEC--CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 799999887765332211 22578999999999 888888 59999999998654
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=6.6e-09 Score=103.50 Aligned_cols=237 Identities=9% Similarity=0.077 Sum_probs=144.3
Q ss_pred CCCCeEEEeCC------CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe----------CCCcEEEEcCCCC
Q 007283 26 PKSNSILYTNG------RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD----------VSGTVRIWGAHND 89 (609)
Q Consensus 26 ~~~~~l~~~~~------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~----------~d~~i~vWd~~~~ 89 (609)
|++..++..+. +.+.++|+.+.+.+..+..-..+ .+++||||++|..++ .+++|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 45555544433 58999999998887666533445 899999999887665 4678999999987
Q ss_pred ceeeEEEeec-------ccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCc-cE------EEEEEee
Q 007283 90 HVLKKEFRVL-------SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSR-RV------LSCAFKP 155 (609)
Q Consensus 90 ~~~~~~~~~~-------~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v------~~~~~~p 155 (609)
+... ++..- ......++|+|||++|.++.... ...+.+.+..+.+.+..+.--.. .+ .-+++.+
T Consensus 160 ~vv~-~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 160 LPIA-DIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCR 237 (426)
T ss_dssp CEEE-EEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred cEEE-EEECCCccccccCCCcceEEEcCCCCEEEEEecCC-CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcC
Confidence 7543 23321 12356789999999999876321 22456677777666655542110 00 0133445
Q ss_pred CCCeEEEEecCCCe-------------------------------------EEEEeCCCCcee--ee--cc-------C-
Q 007283 156 SRPFRIATCGEDFL-------------------------------------VNFYEGPPFKFK--LS--HR-------G- 186 (609)
Q Consensus 156 ~~~~~i~t~~~d~~-------------------------------------i~~~~~~~~~~~--~~--~~-------~- 186 (609)
++...++.. .++. +.+.|....... .. .. +
T Consensus 238 dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~ 316 (426)
T 3c75_H 238 DGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDW 316 (426)
T ss_dssp TSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTE
T ss_pred CCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccc
Confidence 554333322 2221 111111100000 00 00 0
Q ss_pred cccceEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC-eEEEEe-CC
Q 007283 187 HSNFVNCVRFSPDGSKFISVSS----------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK-QVLTAS-AD 254 (609)
Q Consensus 187 h~~~v~~l~~s~dg~~l~s~~~----------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~-~l~s~s-~d 254 (609)
.......++|+||++++.++.. ++.+.+.|..+.+.+.++.. .....++.|+|||+ ++++.. .+
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTT
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCC
Confidence 0011122689999887665532 35799999999998877742 22478899999999 888877 58
Q ss_pred CcEEEeecccCCCCceEEEe
Q 007283 255 KSAKVWDISEDNHGKLKKTL 274 (609)
Q Consensus 255 ~~i~iwd~~~~~~~~~~~~~ 274 (609)
+.|.++|+. ..+.++++
T Consensus 393 ~~VsVID~~---t~kvv~tI 409 (426)
T 3c75_H 393 QTLHIYDAA---TGEELRSV 409 (426)
T ss_dssp TEEEEEETT---TCCEEEEE
T ss_pred CeEEEEECC---CCCEEEEe
Confidence 999999987 45666655
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=6e-09 Score=112.78 Aligned_cols=200 Identities=10% Similarity=0.138 Sum_probs=126.1
Q ss_pred cCCCCcEEEEECCCCCEEEE-----EeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCC------
Q 007283 55 EHAYPATVARFSPNGEWIAS-----ADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKG------ 123 (609)
Q Consensus 55 ~h~~~v~~~~~sp~g~~las-----~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~------ 123 (609)
+|...+..++|||||++||- |+.+.+|++||+.+++.+...+. ......++|+ ||+.|+.+..+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCEEEEEEecCccccccc
Confidence 45567889999999999983 33335899999999875432222 1124678999 9999998876532
Q ss_pred --cceEEEEEcCCCCe----eEEE--ec-CCccEEEEEEeeCCCeEEEEecC---CCeEEEEeCCCCc-eeeeccCcccc
Q 007283 124 --KSLVRAFMWDSGTN----VGEF--DG-HSRRVLSCAFKPSRPFRIATCGE---DFLVNFYEGPPFK-FKLSHRGHSNF 190 (609)
Q Consensus 124 --~~~~~~~~~~~~~~----~~~~--~~-h~~~v~~~~~~p~~~~~i~t~~~---d~~i~~~~~~~~~-~~~~~~~h~~~ 190 (609)
..--+++.|+.+.. ...+ .. |...+.++.++|++..++++.+. ...+.+++..... ....+..+...
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~ 282 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA 282 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence 11123455543321 1222 23 44557889999999976665543 2478888865442 22233444444
Q ss_pred eEEEEEcCCCCEEEEEeC----CCcEEEEeCCCCcc--ccccCcCCCCccceEEEEECCCCCeEEEEeCCC---cEEEee
Q 007283 191 VNCVRFSPDGSKFISVSS----DKKGIIYDGKTADK--IGELSPEDGHKGSVYAVSWSPDGKQVLTASADK---SAKVWD 261 (609)
Q Consensus 191 v~~l~~s~dg~~l~s~~~----d~~i~iwd~~~~~~--~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~---~i~iwd 261 (609)
.... ++++|..|+..+. .+.+..++..++.. +..+. .|...+. .|+|++++|+....++ .|++|+
T Consensus 283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI---PERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE---CCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe---cCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 4444 6777776655543 25788899877653 23332 3444454 8999999887776544 688888
Q ss_pred cc
Q 007283 262 IS 263 (609)
Q Consensus 262 ~~ 263 (609)
+.
T Consensus 357 ~~ 358 (693)
T 3iuj_A 357 YE 358 (693)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=5.9e-08 Score=97.50 Aligned_cols=198 Identities=11% Similarity=-0.012 Sum_probs=128.0
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV 138 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (609)
....++|+|+|+++++...++.|++||..++... ..... ..... ++|+|+++.|+++..+... .+..++.+.+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~-~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~-~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT-TVHPG-FKGGK-PAVTKDKQRVYSIGWEGTH-TVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE-EEEET-CCBCB-CEECTTSSEEEEEBSSTTC-EEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE-Eeecc-CCCCc-eeEecCCCcEEEEecCCCc-eEEEEEcCCCcee
Confidence 5778999999998888888899999999876532 22222 23334 9999999988877653322 2333333333322
Q ss_pred EEE---ec-CCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeee----ccCcccce--EEEEEcCC-CCEEEEEe
Q 007283 139 GEF---DG-HSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLS----HRGHSNFV--NCVRFSPD-GSKFISVS 207 (609)
Q Consensus 139 ~~~---~~-h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~----~~~h~~~v--~~l~~s~d-g~~l~s~~ 207 (609)
..+ .. ....+.+++++|++..+++ +..++.+..|+......... ..++...- +.++|+|+ +.++++-.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 333 12 4456788999996554444 66688899998766543322 22332222 38999995 65666666
Q ss_pred CCCcEEEEeCCCCccccccCcC---CC---------CccceEEEEECCCCCeEEEEe-CCCcEEEeecc
Q 007283 208 SDKKGIIYDGKTADKIGELSPE---DG---------HKGSVYAVSWSPDGKQVLTAS-ADKSAKVWDIS 263 (609)
Q Consensus 208 ~d~~i~iwd~~~~~~~~~~~~~---~~---------h~~~V~~l~~spd~~~l~s~s-~d~~i~iwd~~ 263 (609)
.++.|..|+.... +..+.-. .+ .-.....++++|+|+++++-+ .++.|+.|++.
T Consensus 287 ~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 287 NLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp TTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETT
T ss_pred CCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECC
Confidence 7788999986532 1111000 01 013468999999999888888 88999999964
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.08 E-value=6.3e-08 Score=94.60 Aligned_cols=222 Identities=13% Similarity=0.081 Sum_probs=133.6
Q ss_pred EeecCCCCeEEEeC------CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe----------CCCcEEEEc
Q 007283 22 ISGHPKSNSILYTN------GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD----------VSGTVRIWG 85 (609)
Q Consensus 22 ~~~~~~~~~l~~~~------~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~----------~d~~i~vWd 85 (609)
....|++..++-.+ .+.+.++|..+.+.+..+..-..+ .+++||||++|..++ .+++|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 44568887765553 358999999998887666543444 499999999887654 367899999
Q ss_pred CCCCceeeEEEeecc-------cceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCC
Q 007283 86 AHNDHVLKKEFRVLS-------GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRP 158 (609)
Q Consensus 86 ~~~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (609)
..+.+.... +.... .....++|+|||++|.+..... ...+.+++..+.+.+..+.-.. . ... .|.+.
T Consensus 116 ~~t~~v~~~-I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-~~~VsVID~~t~~vv~tI~v~g--~-~~~-~P~g~ 189 (386)
T 3sjl_D 116 PVTLLPTAD-IELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-APAVGVVDLEGKAFKRMLDVPD--C-YHI-FPTAP 189 (386)
T ss_dssp TTTCCEEEE-EEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCS--E-EEE-EEEET
T ss_pred CCCCeEEEE-EECCCccccccCCCCceEEEcCCCCEEEEEEcCC-CCeEEEEECCCCcEEEEEECCC--c-cee-ecCCC
Confidence 998775433 33221 1356799999999988875321 1245667777777666664211 1 122 24444
Q ss_pred eEEEEecCCCeEEEEeCCC-CceeeeccCc----ccce-EEEEEc-CCCCEEEEEeCCCcEEEEeCCCCc--cccccCcC
Q 007283 159 FRIATCGEDFLVNFYEGPP-FKFKLSHRGH----SNFV-NCVRFS-PDGSKFISVSSDKKGIIYDGKTAD--KIGELSPE 229 (609)
Q Consensus 159 ~~i~t~~~d~~i~~~~~~~-~~~~~~~~~h----~~~v-~~l~~s-~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~ 229 (609)
..+++.+.|+.+.+.+..+ ++.......+ ..++ ....|. ++|+ ++..+.++++.+.|..+.. .+..+...
T Consensus 190 ~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~-~~~vs~~g~V~v~d~~~~~~~v~~~~~~~ 268 (386)
T 3sjl_D 190 DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFLPAVEAL 268 (386)
T ss_dssp TEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEECCCEESS
T ss_pred ceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCc-EEEEeCCCEEEEEECCCCcceeecceecc
Confidence 3455666677777777654 4432111111 1222 124564 6775 4457778999999986553 22222100
Q ss_pred ------CC-CccceEEEEECCCCCeEEEEe
Q 007283 230 ------DG-HKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 230 ------~~-h~~~V~~l~~spd~~~l~s~s 252 (609)
.+ ..+....++++|+++.++..-
T Consensus 269 ~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~ 298 (386)
T 3sjl_D 269 TEAERADGWRPGGWQQVAYHRALDRIYLLV 298 (386)
T ss_dssp CHHHHHTTEEECSSSCEEEETTTTEEEEEE
T ss_pred ccccccccccCCCcceeeECCCCCeEEEEe
Confidence 00 123344577788888777654
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.07 E-value=4.4e-09 Score=103.22 Aligned_cols=172 Identities=8% Similarity=-0.020 Sum_probs=124.1
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCc----------cccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCC
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPL----------QVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAH 87 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~----------~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~ 87 (609)
+...++.+++...++.+++..+++|++.+.+ +......+.. |++++| ||++|+.+ .++.|++||+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEch
Confidence 4568999999988888888889999976543 1112334666 999999 99999998 88999999987
Q ss_pred CCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC
Q 007283 88 NDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED 167 (609)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d 167 (609)
+.. .......+..++..+.+.+.. ++++..+. .+.+|++..+.... +...|.+++|+|+| ++.|..|
T Consensus 115 sl~-~~~~~~~~~~~v~~i~~~~p~--~av~~~dG---~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG---~~vg~~d 181 (388)
T 1xip_A 115 ELS-EFRTVTSFEKPVFQLKNVNNT--LVILNSVN---DLSALDLRTKSTKQ----LAQNVTSFDVTNSQ---LAVLLKD 181 (388)
T ss_dssp STT-CEEEEEECSSCEEEEEECSSE--EEEEETTS---EEEEEETTTCCEEE----EEESEEEEEECSSE---EEEEETT
T ss_pred hhh-ccCccceeecceeeEEecCCC--EEEEECCC---CEEEEEccCCcccc----ccCCceEEEEcCCc---eEEEEcC
Confidence 654 233455667778888777653 55554332 35566665544322 45689999999998 5678889
Q ss_pred CeEEEEeCCCCce--eeec------c---CcccceEEEEEcCCCCEEEEE
Q 007283 168 FLVNFYEGPPFKF--KLSH------R---GHSNFVNCVRFSPDGSKFISV 206 (609)
Q Consensus 168 ~~i~~~~~~~~~~--~~~~------~---~h~~~v~~l~~s~dg~~l~s~ 206 (609)
+.+++|+.+..+. ...+ . +|...|.++.|.+++.++++=
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999997665553 3333 2 477889999999999877753
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=4.9e-08 Score=94.13 Aligned_cols=221 Identities=8% Similarity=0.035 Sum_probs=137.6
Q ss_pred EEeecCCCCeEEEe--CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEee
Q 007283 21 LISGHPKSNSILYT--NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRV 98 (609)
Q Consensus 21 ~~~~~~~~~~l~~~--~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~ 98 (609)
...++|+|+.|++. .++.+..|+. ++.. ..+..+...+..++++|+|+++++...++.|.+|+.+ ++.. .+..
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~--~~~~ 123 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH--LLVG 123 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEEC
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE--EEEe
Confidence 46778999866555 3578889988 4443 3455566779999999999988877777889999975 4421 1211
Q ss_pred c-----ccceeEEEECCCCCEEEEE---ECCC---------CcceEEEEEcCC--CCeeEEEecCCccEEEEEEeeCCCe
Q 007283 99 L-----SGRIDDLQWSPDGLRIVAC---GDGK---------GKSLVRAFMWDS--GTNVGEFDGHSRRVLSCAFKPSRPF 159 (609)
Q Consensus 99 ~-----~~~v~~~~~spdg~~l~~~---~~~~---------~~~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (609)
. ...+..++++|||..+++- |... ......++.++. ++. ..+. .......++|+|++..
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~~-~~~~p~gl~~spdg~~ 201 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRMA-DLDHPNGLAFSPDEQT 201 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEEE-EESSEEEEEECTTSSE
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEEe-cCCCCcceEEcCCCCE
Confidence 1 1246789999999877741 1000 001134566654 332 2222 3345678999999986
Q ss_pred EEEEecC-----CCeEEEEeCCCCcee--eec-cCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCC
Q 007283 160 RIATCGE-----DFLVNFYEGPPFKFK--LSH-RGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDG 231 (609)
Q Consensus 160 ~i~t~~~-----d~~i~~~~~~~~~~~--~~~-~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 231 (609)
++++... .+.|..|+....... ..+ .........+++.++|++++ +..+ .|.+|+. .++.+..+..
T Consensus 202 lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-gv~~~~~-~g~~~~~~~~--- 275 (305)
T 3dr2_A 202 LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-GVCVFDS-DGQLLGHIPT--- 275 (305)
T ss_dssp EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-EEEEECT-TSCEEEEEEC---
T ss_pred EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-cEEEECC-CCCEEEEEEC---
Confidence 4444333 267888875432211 111 11223345688999998544 4444 5999997 4555555431
Q ss_pred CccceEEEEECCCCCeEEEEeCCC
Q 007283 232 HKGSVYAVSWSPDGKQVLTASADK 255 (609)
Q Consensus 232 h~~~V~~l~~spd~~~l~s~s~d~ 255 (609)
+ ..+.+++|+|+++.|..++.++
T Consensus 276 ~-~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 276 P-GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp S-SCCCEEEECTTSCEEEEEETTE
T ss_pred C-CceeEEEEeCCCCEEEEEcCCe
Confidence 2 2588999999998888777654
No 220
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.02 E-value=4.1e-07 Score=87.23 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=122.5
Q ss_pred CCcEEEEECCC-CCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC
Q 007283 58 YPATVARFSPN-GEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT 136 (609)
Q Consensus 58 ~~v~~~~~sp~-g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 136 (609)
.--..+.|+|+ ++++++...++.|..||..+++.. .+ .....+.+++|+|||+.+++. + . -+..+++++++
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~-~~~~~~~~i~~~~dG~l~v~~-~-~---~l~~~d~~~g~ 84 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ--RV-TMDAPVSSVALRQSGGYVATI-G-T---KFCALNWKEQS 84 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE--EE-ECSSCEEEEEEBTTSSEEEEE-T-T---EEEEEETTTTE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE--EE-eCCCceEEEEECCCCCEEEEE-C-C---eEEEEECCCCc
Confidence 34568889995 555666667899999998876532 22 245679999999999966654 2 1 24455665544
Q ss_pred eeEEEec----CCccEEEEEEeeCCCeEEEEecCC--------CeEEEEeCCC-CceeeeccCcccceEEEEEcCCCCEE
Q 007283 137 NVGEFDG----HSRRVLSCAFKPSRPFRIATCGED--------FLVNFYEGPP-FKFKLSHRGHSNFVNCVRFSPDGSKF 203 (609)
Q Consensus 137 ~~~~~~~----h~~~v~~~~~~p~~~~~i~t~~~d--------~~i~~~~~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l 203 (609)
....... ....+..++++|++...+.+-+.+ ..-.+|...+ ++... ...+....+.++|+|||+.|
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~l 163 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEE
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEE
Confidence 3221111 134588999999998544443321 1223443222 22222 22333456789999999866
Q ss_pred -EEEeCCCcEEEEeC--CCCccc--cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 204 -ISVSSDKKGIIYDG--KTADKI--GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 204 -~s~~~d~~i~iwd~--~~~~~~--~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
++.+.++.|.+|+. .++... ..+.....+.+....+++.++|++.++...++.|..||..
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 44556788999986 444321 1111111234567889999999888888778889999875
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.00 E-value=5.8e-08 Score=95.06 Aligned_cols=226 Identities=8% Similarity=-0.018 Sum_probs=129.9
Q ss_pred EEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe----------CCCcEEEEcCCCCceeeEEEeec-------c
Q 007283 38 SVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD----------VSGTVRIWGAHNDHVLKKEFRVL-------S 100 (609)
Q Consensus 38 ~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~----------~d~~i~vWd~~~~~~~~~~~~~~-------~ 100 (609)
.+.+.|..+.+.+..+..-..+ .++|||||+++..++ .+++|.+||..+.+... ++... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~-~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA-DIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE-EEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE-EEECCCccccccC
Confidence 7889999998887766533445 799999999998775 47899999999987543 34332 1
Q ss_pred cceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEec-CCccE------EEEEEeeCCCeEEEEecC----C--
Q 007283 101 GRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG-HSRRV------LSCAFKPSRPFRIATCGE----D-- 167 (609)
Q Consensus 101 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v------~~~~~~p~~~~~i~t~~~----d-- 167 (609)
.....++|||||++|+++..+.. ..+.+-.+|... +..+.- ....+ .-+++.+++....+.-.. +
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~-~~v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~ 201 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSS-AAAGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSS-CEEEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred CCcceEEEcCCCCEEEEEccCCC-CeEEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCe
Confidence 24678999999999888753211 123331144432 232210 00000 001111222111111100 0
Q ss_pred -----------------------------CeEEEEeCCCCc--eeeecc---------C-cccceEEEEEcCCCCEEEEE
Q 007283 168 -----------------------------FLVNFYEGPPFK--FKLSHR---------G-HSNFVNCVRFSPDGSKFISV 206 (609)
Q Consensus 168 -----------------------------~~i~~~~~~~~~--~~~~~~---------~-h~~~v~~l~~s~dg~~l~s~ 206 (609)
+.+.+.|..... ...... + .......++|+|||+.+..+
T Consensus 202 v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred EEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 223333322111 110000 0 00111226899999977765
Q ss_pred eC---------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCe-EEEEe-CCCcEEEeecccCCCCceEEEec
Q 007283 207 SS---------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQ-VLTAS-ADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 207 ~~---------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~-l~s~s-~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
.. +..+.++|..+.+.+..+.. ......+.|+|||++ +++.. .+++|.++|+. ..+..+++.
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~---t~kvv~~I~ 354 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA---SDQDQSSVE 354 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEESS---SCEEEEECC
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCCEEEEEccCCCCeEEEEECC---CCcEEEEEE
Confidence 33 23566999999998877742 225789999999984 55666 58999999987 456665554
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=1.2e-07 Score=93.02 Aligned_cols=111 Identities=10% Similarity=0.076 Sum_probs=74.1
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCee-----ee-----eEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEE
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTL-----TE-----EAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWD 519 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~-----~~-----~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd 519 (609)
+..++++|||+.+..+..++. ++|.+....+ .. .....++.+....++++++|.++++...++.|.+||
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred cceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 567899999999888877764 5555532111 00 001223445566789999999999999999999999
Q ss_pred ccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q 007283 520 RVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIY 561 (609)
Q Consensus 520 ~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw 561 (609)
..+++........+....++++|.++++++++.+..+.+-+|
T Consensus 276 ~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 276 SADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp TTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 734433221111224568999999999988888766544444
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.96 E-value=3.4e-08 Score=97.01 Aligned_cols=242 Identities=8% Similarity=0.010 Sum_probs=145.3
Q ss_pred CceeEEeecCCCCeEEEe-C--CCEEEEEeCCCCcccc------ccccCCCCcEEEEECCCCCEEEEEeC-----CCcEE
Q 007283 17 GRGILISGHPKSNSILYT-N--GRSVIILDLSNPLQVS------IYGEHAYPATVARFSPNGEWIASADV-----SGTVR 82 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~--~~~~~i~~~~~~~~~~------~~~~h~~~v~~~~~sp~g~~las~~~-----d~~i~ 82 (609)
..|..++++|+|+.++.. . +..+.||.+.+++... ...+|-..+..++|+|+|++.++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 467899999999887763 2 2213344333444321 11235567999999999998776543 57899
Q ss_pred EEcCCCCceeeEEEeec------ccceeEEEECCCCCEEEEEECC-CCcceEEEEEcCCCCeeEEEecCC----------
Q 007283 83 IWGAHNDHVLKKEFRVL------SGRIDDLQWSPDGLRIVACGDG-KGKSLVRAFMWDSGTNVGEFDGHS---------- 145 (609)
Q Consensus 83 vWd~~~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~---------- 145 (609)
+||..+++.+. .+... ...+..++++|++.++..+..+ .....+.+++++.++....+.+|.
T Consensus 97 ~~d~~tg~~~~-~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 97 AWDTLNNQLSR-VIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEETTTTEEEE-EEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEECCCCeEEE-EEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99998876432 23321 1246889999875555444321 022345566666555444333321
Q ss_pred -------------------ccEEEEEEeeCCCeEEEEecCCCeEEEEeCC---CCc-----ee--eeccCcccceEEEEE
Q 007283 146 -------------------RRVLSCAFKPSRPFRIATCGEDFLVNFYEGP---PFK-----FK--LSHRGHSNFVNCVRF 196 (609)
Q Consensus 146 -------------------~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~---~~~-----~~--~~~~~h~~~v~~l~~ 196 (609)
..+..++|+|++..++++......+..++.. ... .. ....++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 2357899999997644443333444444321 100 00 011133345567899
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEee
Q 007283 197 SPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWD 261 (609)
Q Consensus 197 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd 261 (609)
+++|.++++...++.|.+||..+++.. .+.. ..+-....+++|.++++++++.+..+.+.+|.
T Consensus 256 d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~-~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITSADRAYK-LLVT-DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEETTTTEEE-EEEE-CGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCCCCEEEEccCCCeEEEEECCCCCEE-EEEE-CCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 999998888888999999998555432 2211 11234588999999999888887665554443
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.95 E-value=2.2e-07 Score=89.46 Aligned_cols=205 Identities=11% Similarity=0.019 Sum_probs=123.8
Q ss_pred cccCCCCcEEEEECCCCC-EEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEE
Q 007283 53 YGEHAYPATVARFSPNGE-WIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFM 131 (609)
Q Consensus 53 ~~~h~~~v~~~~~sp~g~-~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~ 131 (609)
+..+......++|+|+|+ ++.+...++.|..|+. +++. ..+......+..++|+|||+.+++. .+.. .+..++
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~--~~~~~~~~~~~gl~~d~dG~l~v~~-~~~~--~v~~~~ 113 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV--DVLLDATAFTNGNAVDAQQRLVHCE-HGRR--AITRSD 113 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE--EEEEESCSCEEEEEECTTSCEEEEE-TTTT--EEEEEC
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE--EEEeCCCCccceeeECCCCCEEEEE-CCCC--EEEEEC
Confidence 333445578899999999 5567777899999987 4432 3455566778999999999855543 2211 233333
Q ss_pred cCCCCeeEEEecC-----CccEEEEEEeeCCCeEEEE----ecC-------------CCeEEEEeCCCCceeeeccCccc
Q 007283 132 WDSGTNVGEFDGH-----SRRVLSCAFKPSRPFRIAT----CGE-------------DFLVNFYEGPPFKFKLSHRGHSN 189 (609)
Q Consensus 132 ~~~~~~~~~~~~h-----~~~v~~~~~~p~~~~~i~t----~~~-------------d~~i~~~~~~~~~~~~~~~~h~~ 189 (609)
.+ ++ ...+..+ ...+..++++|++.. +++ |.. .+.+..++...++..... ...
T Consensus 114 ~~-g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l-~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~ 188 (305)
T 3dr2_A 114 AD-GQ-AHLLVGRYAGKRLNSPNDLIVARDGAI-WFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD 188 (305)
T ss_dssp TT-SC-EEEEECEETTEECSCCCCEEECTTSCE-EEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES
T ss_pred CC-CC-EEEEEeccCCCccCCCCCEEECCCCCE-EEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC
Confidence 33 32 2222211 134567899999974 554 321 245666676555443332 344
Q ss_pred ceEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCccccccCc-CCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 190 FVNCVRFSPDGSKFISVSSD------KKGIIYDGKTADKIGELSP-EDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 190 ~v~~l~~s~dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~-~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
..+.++|+|||+.|..+... +.|.+|+...+. +..... .....+....+++.++|++.++. .+ .|.+|+.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~ 265 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS 265 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC
Confidence 56789999999977777655 688899876443 110000 00122344578999999855444 44 4999987
Q ss_pred ccCCCCceEEEec
Q 007283 263 SEDNHGKLKKTLT 275 (609)
Q Consensus 263 ~~~~~~~~~~~~~ 275 (609)
. ++....+.
T Consensus 266 ~----g~~~~~~~ 274 (305)
T 3dr2_A 266 D----GQLLGHIP 274 (305)
T ss_dssp T----SCEEEEEE
T ss_pred C----CCEEEEEE
Confidence 4 44554443
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.92 E-value=8.9e-07 Score=86.08 Aligned_cols=192 Identities=15% Similarity=0.043 Sum_probs=121.1
Q ss_pred cEEEEECCCC-CEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee
Q 007283 60 ATVARFSPNG-EWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV 138 (609)
Q Consensus 60 v~~~~~sp~g-~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (609)
...++|+|++ .++.+...++.|..||..+++.. .+. ....+.+++|+|||+.+++..+ -+..++.+.+...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~--~~~-~~~~v~~i~~~~dg~l~v~~~~-----gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT--VHA-LPFMGSALAKISDSKQLIASDD-----GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE--EEE-CSSCEEEEEEEETTEEEEEETT-----EEEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEE-CCCcceEEEEeCCCeEEEEECC-----CEEEEECCCCcEE
Confidence 5678899975 55566667889999998876532 222 3467999999999987776521 1445555555432
Q ss_pred EEEecC-----CccEEEEEEeeCCCeEEEEecC-----CCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEE-e
Q 007283 139 GEFDGH-----SRRVLSCAFKPSRPFRIATCGE-----DFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISV-S 207 (609)
Q Consensus 139 ~~~~~h-----~~~v~~~~~~p~~~~~i~t~~~-----d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~-~ 207 (609)
. +... ...+..++++|++...+.+.+. .+.+..++ .++... +..+....+.++|+|||+.|..+ +
T Consensus 123 ~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 123 L-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp E-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEET
T ss_pred E-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEEC
Confidence 2 2211 2468899999999854433321 23455555 343322 22233456789999999866554 4
Q ss_pred CCCcEEEEeCC--CC-ccc--cccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 208 SDKKGIIYDGK--TA-DKI--GELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 208 ~d~~i~iwd~~--~~-~~~--~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.++.|.+|+.. ++ ... ..+.......+....+++.++|.+.++...++.|..|+..
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 57889999975 44 211 1111111233456789999999887777667889988863
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.78 E-value=5.3e-06 Score=81.65 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=67.6
Q ss_pred eCCCeEEEEecCCCeEEEEeCCCC----ceeeecc------C-cccceEEEEEcCCCCEEEEEeCC------CcEEEEeC
Q 007283 155 PSRPFRIATCGEDFLVNFYEGPPF----KFKLSHR------G-HSNFVNCVRFSPDGSKFISVSSD------KKGIIYDG 217 (609)
Q Consensus 155 p~~~~~i~t~~~d~~i~~~~~~~~----~~~~~~~------~-h~~~v~~l~~s~dg~~l~s~~~d------~~i~iwd~ 217 (609)
+++.+.+++|..+..|.+.|..+. +...... . -...-..+.++|+| +++++..+ +.+.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778888899999999999997532 3333221 0 11134567889999 77776655 78999999
Q ss_pred CCCccccccCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 218 KTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 218 ~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
++.+.+.++....+....-+.+.|+|+++.+++..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~ 206 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSE 206 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECB
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEcc
Confidence 99998887753222223345688899999888774
No 227
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=0.0012 Score=72.47 Aligned_cols=529 Identities=11% Similarity=0.029 Sum_probs=269.1
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCcccccccc-------CCCCcEEEEECCCCC-EEEEEeCCCcEEEEcCCCC
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGE-------HAYPATVARFSPNGE-WIASADVSGTVRIWGAHND 89 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~-------h~~~v~~~~~sp~g~-~las~~~d~~i~vWd~~~~ 89 (609)
....|...++|..=+.+. .-+..||..+-+....... -...|.++...++|+ +-+ +..++.+..||..++
T Consensus 20 ~V~~I~qD~~G~lWigT~-~GL~ryDG~~f~~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~lWi-gt~~~Gl~~~d~~~~ 97 (781)
T 3v9f_A 20 YVLSITQDKQGFLWFATE-EGLNKFDGTRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWI-ATQRAGLNAYNYETQ 97 (781)
T ss_dssp BEEEEEECTTSCEEEEES-SCEEEECSSSEEEECCCSSCSSSCCCSCSCEEEEEECSSSSEEEE-EESSSCEEEEETTTT
T ss_pred EeEEEEECCCCCEEEccC-CcCccccCCceEEEEcCCCCCccccccccccceEEEcCCCCEEEE-EeCCCCcceECCCCC
Confidence 456788888886433333 3366676543111111000 123599999999998 555 445546889998776
Q ss_pred ceeeEEEe------ecccceeEEEECC--CCCEEEEEECCCCcceEEEEEcCCCCeeEEEec------CCccEEEEEEee
Q 007283 90 HVLKKEFR------VLSGRIDDLQWSP--DGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG------HSRRVLSCAFKP 155 (609)
Q Consensus 90 ~~~~~~~~------~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~p 155 (609)
+....... .....|.++...+ +|...+.+..+ + +..++-+.+ ....+.. ....|.++...+
T Consensus 98 ~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~-g---l~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~ 172 (781)
T 3v9f_A 98 SFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYR-G---IEYLDIATG-KFTHYNKSTVPALPSEQTWTATEAE 172 (781)
T ss_dssp EEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSS-C---EEEEETTTT-EEEEESTTTCTTCSCCCEEEEEEEE
T ss_pred eEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCC-C---eeEEECCCC-eEEeeccCcccCCCccceEEEEECC
Confidence 53211001 0123588888888 77665544121 1 122222222 2222221 134578888877
Q ss_pred CCCeEEEEecCCCeEEEEeCCCCceeeecc-------CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCc
Q 007283 156 SRPFRIATCGEDFLVNFYEGPPFKFKLSHR-------GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSP 228 (609)
Q Consensus 156 ~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 228 (609)
++.. -.+..++-+..++....+...-.. -....|.++...++|.+.+ |+.+ -+.+||..+++.......
T Consensus 173 ~g~l--wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~ 248 (781)
T 3v9f_A 173 DGKL--YIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHNN 248 (781)
T ss_dssp TTEE--EEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC----
T ss_pred CCCE--EEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEcC
Confidence 7753 334444346777766544322110 0134689999988887554 5555 688899766543221110
Q ss_pred C----CCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEE----Ee-ccCCCCCcc-ceEEEEEE-cCCeEE
Q 007283 229 E----DGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKK----TL-TPSGSGGVD-DMLVGCLW-QNDFLV 297 (609)
Q Consensus 229 ~----~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~----~~-~~~~~~~~~-~~~~~~~~-~~~~~~ 297 (609)
. .-....|.++...++|.+.+ |+..+-|.+++........... .+ ......... ..+..... ....+.
T Consensus 249 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW 327 (781)
T 3v9f_A 249 PGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW 327 (781)
T ss_dssp -------CCCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE
T ss_pred CCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE
Confidence 0 01235699999988887554 4454568888875321100000 00 000011111 12222222 244677
Q ss_pred EEEcCCcEEEEeCCCCCCCcee--------eeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceec---ccc
Q 007283 298 IVSLGGTISIFSANDLEKSPLQ--------LSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQ---RKE 366 (609)
Q Consensus 298 ~~~~~g~i~~~~~~~~~~~~~~--------~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~---~~~ 366 (609)
+++.++-+..++.....-.... .......|.++.... + ..+..|+.++-+..++...+...... ...
T Consensus 328 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~-g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 405 (781)
T 3v9f_A 328 IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-Q-GKLWIGTDGGGINVFENGKRVAIYNKENRELL 405 (781)
T ss_dssp EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-T-SCEEEEEBSSCEEEEETTEEEEECC-----CC
T ss_pred EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-C-CCEEEEeCCCcEEEEECCCCeEEEccCCCCCC
Confidence 7777777777765432110000 001234577766533 2 34556666666777776543221111 111
Q ss_pred ccceeEeeee-CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCC--eeeEE
Q 007283 367 NSQIKCFAAI-EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGA--EVVST 443 (609)
Q Consensus 367 ~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 443 (609)
...+.++... .+.+..+..++-+..++.............. ......++..+....+-+++..|+..+... .....
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKN-ELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIHH 484 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTT-CCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCEE
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCC-CCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEec
Confidence 2345555543 5567777766667777654332111000000 111222333443344444455676666421 11111
Q ss_pred ecc------CCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEec-CCCceEEEEECCCCCEEEEEeCCCeEE
Q 007283 444 INL------RFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEK-HRGAVSVIRYSPDVSMFASGDVNREAI 516 (609)
Q Consensus 444 ~~~------~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~-h~~~i~~v~~s~~~~~l~s~s~d~~v~ 516 (609)
... ...+.++...++|.+.+. +.++-|..|+..++.+.......+ ....|.++...++|.+.++.. +|-+.
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~ 562 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVC 562 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceE
Confidence 111 245788888898886654 443447778765544321100001 134689999999998776654 66548
Q ss_pred EEEccCCceEEee-ec-CCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCC
Q 007283 517 VWDRVSREVKLKN-ML-YHTARINCLAWSPNNSMVATGSLDTCVIIYEIDK 565 (609)
Q Consensus 517 iwd~~~~~~~~~~-~~-~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~ 565 (609)
.||..+.+...-. .. .....|.++...++|++.++ +..| |..++...
T Consensus 563 ~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~-t~~G-l~~~~~~~ 611 (781)
T 3v9f_A 563 FPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAS-TNTG-ISCYITSK 611 (781)
T ss_dssp ESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEE-CSSC-EEEEETTT
T ss_pred EECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEE-cCCc-eEEEECCC
Confidence 8887655432111 01 12346889999999986654 4455 66677653
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.65 E-value=3.1e-05 Score=72.64 Aligned_cols=223 Identities=9% Similarity=-0.018 Sum_probs=134.5
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceee
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~ 93 (609)
..|..+.++|+++.|++.+ .+.|..+++............-.....++++|++..|. +-...+.|.+++.+.... .
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-R 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-E
Confidence 4567889999877777664 47899999876554333322224578999999765554 545678899998865321 1
Q ss_pred EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEe-cCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 94 KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD-GHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 94 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
............++++|++.+|..+..+.....+.....+.. ....+. ........++++|++..++++-...+.|..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 112212245689999998767666553321223434444432 222222 233457889999988776777777788888
Q ss_pred EeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK 246 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~ 246 (609)
++...........+ ......+++. +..|..+. ..+.|..+|..+++.+..+.. +.......+++.|++.
T Consensus 194 ~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~--g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 194 LNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHP--HKQTRLYGITIALSQC 263 (267)
T ss_dssp EETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECC--SSCCCCCCEEEECSCC
T ss_pred EecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcc--ccccccceeeecCccC
Confidence 88654332222222 1223455553 44444444 568899999988887766642 2112356677777764
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.64 E-value=1.4e-06 Score=85.19 Aligned_cols=204 Identities=9% Similarity=-0.073 Sum_probs=123.2
Q ss_pred ceeEEeecCCCCeEEEeC-----------CCEEEEEeCCCCccccccccC-------CCCcEEEEECCCCCEEEEEeC--
Q 007283 18 RGILISGHPKSNSILYTN-----------GRSVIILDLSNPLQVSIYGEH-------AYPATVARFSPNGEWIASADV-- 77 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~-----------~~~~~i~~~~~~~~~~~~~~h-------~~~v~~~~~sp~g~~las~~~-- 77 (609)
.| .+.++|||..++.++ ++.+.++|+.+.+....+..+ ...-..++|||||++|+.+..
T Consensus 67 ~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 67 LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 35 899999999887765 478999999998887766422 123557899999999998764
Q ss_pred CCcEEE--EcCCCCceeeEEEee-------cccceeEEEECCCCCEEEEEECC----CCc--------------------
Q 007283 78 SGTVRI--WGAHNDHVLKKEFRV-------LSGRIDDLQWSPDGLRIVACGDG----KGK-------------------- 124 (609)
Q Consensus 78 d~~i~v--Wd~~~~~~~~~~~~~-------~~~~v~~~~~spdg~~l~~~~~~----~~~-------------------- 124 (609)
+..|.+ +|..+ + ..+.. ..+.-..+++++||+.++..-+. ...
T Consensus 146 ~~~v~V~~iD~~t---v-~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 146 SAAAGLSVPGASD---D-QLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp SCEEEEEETTTEE---E-EEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred CCeEEEEEEchhh---c-eEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 467888 99866 1 11211 01111224556666554432221 000
Q ss_pred ---------ceEEEEEcCCCC--eeEEEec-------CC---ccEEEEEEeeCCCeEEEEec---C-----CCeEEEEeC
Q 007283 125 ---------SLVRAFMWDSGT--NVGEFDG-------HS---RRVLSCAFKPSRPFRIATCG---E-----DFLVNFYEG 175 (609)
Q Consensus 125 ---------~~~~~~~~~~~~--~~~~~~~-------h~---~~v~~~~~~p~~~~~i~t~~---~-----d~~i~~~~~ 175 (609)
..+.+.+..... .+..+.- +. .....++|+|++...+++.. . +..+.++|.
T Consensus 222 ~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~ 301 (368)
T 1mda_H 222 PGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp TTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred CCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC
Confidence 001111211110 0000000 00 00011679999887665543 2 234559999
Q ss_pred CCCceeeeccCcccceEEEEEcCCCC-EEEEEe-CCCcEEEEeCCCCccccccC
Q 007283 176 PPFKFKLSHRGHSNFVNCVRFSPDGS-KFISVS-SDKKGIIYDGKTADKIGELS 227 (609)
Q Consensus 176 ~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~s~~-~d~~i~iwd~~~~~~~~~~~ 227 (609)
.+.+....+.... ....++|+|||+ .+++.. .++++.++|..+.+.+.++.
T Consensus 302 ~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 302 SVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp SSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 8887766654332 478899999998 556666 59999999999999887774
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.58 E-value=1.7e-05 Score=84.93 Aligned_cols=135 Identities=12% Similarity=0.146 Sum_probs=88.0
Q ss_pred cCCC---CEEEEEeCCCcEEEEEecCCeeeeeEEEec---------CCCce------------------------EEEEE
Q 007283 456 APDG---SEAIIGSQDGKLRVYSIRGDTLTEEAVLEK---------HRGAV------------------------SVIRY 499 (609)
Q Consensus 456 sp~g---~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~---------h~~~i------------------------~~v~~ 499 (609)
..+| ..++.++.+|.|+++|..++++.....+.. ...++ ..++|
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~ 400 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSF 400 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEE
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceE
Confidence 3466 578889999999999988776543221110 00111 15688
Q ss_pred CCCCCEEEEEeC-------------------------------------------CCeEEEEEccCCceEEeeecCCCCc
Q 007283 500 SPDVSMFASGDV-------------------------------------------NREAIVWDRVSREVKLKNMLYHTAR 536 (609)
Q Consensus 500 s~~~~~l~s~s~-------------------------------------------d~~v~iwd~~~~~~~~~~~~~h~~~ 536 (609)
+|++.++.+... .+.+..||+.+++..... .+...
T Consensus 401 dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~--~~~~~ 478 (677)
T 1kb0_A 401 NPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV--EHVSP 478 (677)
T ss_dssp ETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE--EESSS
T ss_pred cCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec--CCCCC
Confidence 999887776543 278999999888765432 23334
Q ss_pred eEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCCeEE
Q 007283 537 INCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEHSVV 593 (609)
Q Consensus 537 i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~~l~ 593 (609)
+....++.++.+++.++.|+.+++||..+++ .+..+..++.....-+.|. +++.++
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~-~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATGE-KLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCCc-eeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 5555666788889999999999999998754 4455544454434456665 665443
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.57 E-value=7.7e-06 Score=80.49 Aligned_cols=224 Identities=13% Similarity=0.091 Sum_probs=135.4
Q ss_pred CCCCeEEEeC--CCEEEEEeCCCC-c---cccccc------cCC-CCcEEEEECCCCCEEEEEeCC------CcEEEEcC
Q 007283 26 PKSNSILYTN--GRSVIILDLSNP-L---QVSIYG------EHA-YPATVARFSPNGEWIASADVS------GTVRIWGA 86 (609)
Q Consensus 26 ~~~~~l~~~~--~~~~~i~~~~~~-~---~~~~~~------~h~-~~v~~~~~sp~g~~las~~~d------~~i~vWd~ 86 (609)
++++.|+.++ .++|.++|+.+. + ...+++ ... ..--.+..+|+| +.+++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7888888775 479999998543 3 222221 000 011235688999 66665444 78999999
Q ss_pred CCCceeeEEEeeccc---ceeEEEECCCCCEEEEEECC----------------CCcceEEEEEcCCCCeeEEEecC-C-
Q 007283 87 HNDHVLKKEFRVLSG---RIDDLQWSPDGLRIVACGDG----------------KGKSLVRAFMWDSGTNVGEFDGH-S- 145 (609)
Q Consensus 87 ~~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~h-~- 145 (609)
.+.++.. ++..-.+ --..+.|+|+++.+++..=+ .....+.+|+|+..+.+.++.-- .
T Consensus 172 ~T~~v~~-~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLG-KWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEE-ECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEE-EEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9877544 3332111 23458889999988886300 11235788899887666666532 1
Q ss_pred ccEEEEEE--eeCCCeEEEEec-----CCCeEEEEeCCCCce--eee--cc----------------CcccceEEEEEcC
Q 007283 146 RRVLSCAF--KPSRPFRIATCG-----EDFLVNFYEGPPFKF--KLS--HR----------------GHSNFVNCVRFSP 198 (609)
Q Consensus 146 ~~v~~~~~--~p~~~~~i~t~~-----~d~~i~~~~~~~~~~--~~~--~~----------------~h~~~v~~l~~s~ 198 (609)
.....+.| +|++.+.++++- -++.+.+|....++. ... .. +-......+.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23345555 999998777776 666775543211211 111 00 0023467899999
Q ss_pred CCCEEEEEeC-CCcEEEEeCCCC---ccccccCcCCC------C------ccceEEEEECCCCCeEEEEe
Q 007283 199 DGSKFISVSS-DKKGIIYDGKTA---DKIGELSPEDG------H------KGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 199 dg~~l~s~~~-d~~i~iwd~~~~---~~~~~~~~~~~------h------~~~V~~l~~spd~~~l~s~s 252 (609)
||++|.++.. .+.|.+||+... +.+..+.. .| | .+.=..+.++|||++|+.+.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~t-GG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKL-GGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-BTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEe-CCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9998877664 678999997532 23332211 00 1 01236789999999988886
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.53 E-value=0.00025 Score=70.14 Aligned_cols=291 Identities=12% Similarity=0.022 Sum_probs=154.2
Q ss_pred CCCEEEEEeCCCCccccccccC---------CCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeE
Q 007283 35 NGRSVIILDLSNPLQVSIYGEH---------AYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDD 105 (609)
Q Consensus 35 ~~~~~~i~~~~~~~~~~~~~~h---------~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~ 105 (609)
..+.++.+|..+++.+-.+... ...+.+. ...++..|..++.++.|..+|..+++.+- .+.........
T Consensus 61 ~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W-~~~~~~~~~~~ 138 (376)
T 3q7m_A 61 RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW-QTKVAGEALSR 138 (376)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE-EEECSSCCCSC
T ss_pred CCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE-EEeCCCceEcC
Confidence 3568889999888765433321 1223222 22234566667788999999998887542 33322221112
Q ss_pred EEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccE-----EEEEEeeCCCeEEEEecCCCeEEEEeCCCCce
Q 007283 106 LQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRV-----LSCAFKPSRPFRIATCGEDFLVNFYEGPPFKF 180 (609)
Q Consensus 106 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-----~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~ 180 (609)
.... ++ .+++...+ ..+..++-.+++.+..+....... ...... ++ .+..+..++.+..+|..+++.
T Consensus 139 p~~~-~~-~v~v~~~~---g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~--~v~~g~~~g~l~~~d~~tG~~ 210 (376)
T 3q7m_A 139 PVVS-DG-LVLIHTSN---GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FG--AAVVGGDNGRVSAVLMEQGQM 210 (376)
T ss_dssp CEEE-TT-EEEEECTT---SEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TT--EEEECCTTTEEEEEETTTCCE
T ss_pred CEEE-CC-EEEEEcCC---CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CC--EEEEEcCCCEEEEEECCCCcE
Confidence 2222 34 44433221 124455555666666554322111 111122 22 366678888899999877766
Q ss_pred eeeccCcc--c-----ceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEE
Q 007283 181 KLSHRGHS--N-----FVNCVRFSP--DGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTA 251 (609)
Q Consensus 181 ~~~~~~h~--~-----~v~~l~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~ 251 (609)
.-...... . .+..+.-.| .+..+..++.++.+..+|..+++.+..... .....+.. ++..++.+
T Consensus 211 ~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-----~~~~~~~~--~~~~l~~~ 283 (376)
T 3q7m_A 211 IWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL-----GSVNDFIV--DGNRIYLV 283 (376)
T ss_dssp EEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC-----CCEEEEEE--ETTEEEEE
T ss_pred EEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC-----CCCCCceE--ECCEEEEE
Confidence 54332110 0 000000111 245677788899999999999887655421 22333433 46677788
Q ss_pred eCCCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEE-E
Q 007283 252 SADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTA-L 330 (609)
Q Consensus 252 s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~-~ 330 (609)
+.++.+..+|... ++..-............ ....++.+++++.+|.+++++...... ..........+.. .
T Consensus 284 ~~~g~l~~~d~~t---G~~~w~~~~~~~~~~~~----~~~~~~~l~v~~~~g~l~~~d~~tG~~-~~~~~~~~~~~~~~~ 355 (376)
T 3q7m_A 284 DQNDRVMALTIDG---GVTLWTQSDLLHRLLTS----PVLYNGNLVVGDSEGYLHWINVEDGRF-VAQQKVDSSGFQTEP 355 (376)
T ss_dssp ETTCCEEEEETTT---CCEEEEECTTTTSCCCC----CEEETTEEEEECTTSEEEEEETTTCCE-EEEEECCTTCBCSCC
T ss_pred cCCCeEEEEECCC---CcEEEeecccCCCcccC----CEEECCEEEEEeCCCeEEEEECCCCcE-EEEEecCCCcceeCC
Confidence 8899999999863 44443332111111111 112467888888899999998765321 1122221122211 1
Q ss_pred EEecCCCCEEEEEecCCcEEEEe
Q 007283 331 TVLNIDPKVILSSSYDGLIVKWI 353 (609)
Q Consensus 331 ~~~~~~~~~~~t~s~dg~i~~W~ 353 (609)
... +..++.++.+|.+..++
T Consensus 356 ~~~---~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 356 VAA---DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEE---TTEEEEEBTTSCEEEEE
T ss_pred EEE---CCEEEEEeCCCEEEEEe
Confidence 121 24667778888887763
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.52 E-value=2.6e-06 Score=82.86 Aligned_cols=296 Identities=10% Similarity=0.038 Sum_probs=161.9
Q ss_pred eecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccc
Q 007283 23 SGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGR 102 (609)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~ 102 (609)
...++|...+...++.+..+| .+++....+..+...+..+.+.++|++.+.. .+ +..+|. +++.+. .+......
T Consensus 26 ~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t-~~--l~~~d~-~g~~~~-~~~~~~~~ 99 (330)
T 3hxj_A 26 ILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGS-DK--VYAINP-DGTEKW-RFDTKKAI 99 (330)
T ss_dssp EECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSS-CE--EEEECC-CGGGGG-GSCC----
T ss_pred eEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEec-Cc--EEEECC-CCcEEE-EEECCCCc
Confidence 344556544444456788888 7776654444444456788888888866643 33 888885 433221 11111112
Q ss_pred eeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee
Q 007283 103 IDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL 182 (609)
Q Consensus 103 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~ 182 (609)
.....+. ++...+ ...+. -+..++-+ +........+...+.++...+++. +..++.++.+..++.. ++...
T Consensus 100 ~~~~~~~-~~~l~v-~t~~~---~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 100 VSDFTIF-EDILYV-TSMDG---HLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp -CCEEEE-TTEEEE-ECTTS---EEEEECTT-SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCEEE
T ss_pred ccCceEE-CCEEEE-EecCC---EEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCEeE
Confidence 2223333 554333 32221 12333333 455555554555555666666665 5557777888899877 65554
Q ss_pred eccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 183 SHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 183 ~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
.+......+.++.+.++|..++ ++ +.+..+| .+++...... .....+.++...++|.+ ..++.++.+..++.
T Consensus 171 ~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~---~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 171 RFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFY---AGYWTVTRPAISEDGTI-YVTSLDGHLYAINP 242 (330)
T ss_dssp EEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEEC---CSSCCCSCCEECTTSCE-EEEETTTEEEEECT
T ss_pred EEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEc---cCCcceeceEECCCCeE-EEEcCCCeEEEECC
Confidence 4444455677778888887544 44 8899999 6666554442 22355778888888754 45566788888874
Q ss_pred ccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeeeCCCCCeEEEEEecCCCCEEEE
Q 007283 263 SEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLSGHMKNVTALTVLNIDPKVILS 342 (609)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~t 342 (609)
. ++....+..... ..... ....+..+.+++.+|.+..++.. .............+.++... .+ ..+..
T Consensus 243 ~----g~~~~~~~~~~~-~~~~~---~~~~~g~l~v~t~~ggl~~~d~~--g~~~~~~~~~~~~~~~~~~d-~~-g~l~~ 310 (330)
T 3hxj_A 243 D----GTEKWRFKTGKR-IESSP---VIGNTDTIYFGSYDGHLYAINPD--GTEKWNFETGSWIIATPVID-EN-GTIYF 310 (330)
T ss_dssp T----SCEEEEEECSSC-CCSCC---EECTTSCEEEECTTCEEEEECTT--SCEEEEEECSSCCCSCCEEC-TT-CCEEE
T ss_pred C----CCEeEEeeCCCC-ccccc---eEcCCCeEEEecCCCCEEEECCC--CcEEEEEEcCCccccceEEc-CC-CEEEE
Confidence 3 333333322111 11111 11235677888888888888742 12222222223334444432 23 34566
Q ss_pred EecCCcEEEEe
Q 007283 343 SSYDGLIVKWI 353 (609)
Q Consensus 343 ~s~dg~i~~W~ 353 (609)
++.+|.+++-.
T Consensus 311 gt~~G~~~~~~ 321 (330)
T 3hxj_A 311 GTRNGKFYALF 321 (330)
T ss_dssp ECTTSCEEEEE
T ss_pred EcCCCeEEEEe
Confidence 78888887653
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.52 E-value=9.5e-07 Score=90.08 Aligned_cols=226 Identities=13% Similarity=0.104 Sum_probs=140.8
Q ss_pred cCCCCeEEEeC--CCEEEEEeCCCCcccccccc-CCCCcEEEEE-C-CCCCEEEEEe------------------CCCcE
Q 007283 25 HPKSNSILYTN--GRSVIILDLSNPLQVSIYGE-HAYPATVARF-S-PNGEWIASAD------------------VSGTV 81 (609)
Q Consensus 25 ~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~-h~~~v~~~~~-s-p~g~~las~~------------------~d~~i 81 (609)
.+||.++...+ +.+|.+.|+.+.+...++.- .....-.+++ + |+++|+..++ .++++
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 55887765543 46899999998775553321 1234678887 5 9999998773 34588
Q ss_pred EEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCc------------ceEEEEEcCC-------CC-----e
Q 007283 82 RIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGK------------SLVRAFMWDS-------GT-----N 137 (609)
Q Consensus 82 ~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~------------~~~~~~~~~~-------~~-----~ 137 (609)
-+.|.++.++.. ++..- +.-..++++|||++++++..+... ..+.+.+|.. ++ .
T Consensus 178 tvID~~t~~v~~-qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWEVAW-QVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTEEEE-EEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCeEEE-EEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 999998866433 33321 245778999999999988854322 2233333321 10 0
Q ss_pred eEEEecCC-------------ccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCc------------eeeeccCcccceE
Q 007283 138 VGEFDGHS-------------RRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFK------------FKLSHRGHSNFVN 192 (609)
Q Consensus 138 ~~~~~~h~-------------~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~------------~~~~~~~h~~~v~ 192 (609)
+..+.... ....++.++|||.++++++..+.++.++|..+.+ ...... -.....
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcc
Confidence 12222211 1223588999999989998888999999987542 111111 123467
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCC----------CccccccCcC--CCCccceEEEEECCCCCeEEEEeC
Q 007283 193 CVRFSPDGSKFISVSSDKKGIIYDGKT----------ADKIGELSPE--DGHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 193 ~l~~s~dg~~l~s~~~d~~i~iwd~~~----------~~~~~~~~~~--~~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
.++|+|+|...++.--|+.+.+||..+ .+.+.++... .+|...-..+.++|||++|++...
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 899999995455666799999999765 2233333211 133222233456899999998854
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.51 E-value=0.00025 Score=66.32 Aligned_cols=236 Identities=12% Similarity=0.001 Sum_probs=132.0
Q ss_pred CeEEEeCCCEEEEEeCCCCccc-----cccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEeecccc
Q 007283 29 NSILYTNGRSVIILDLSNPLQV-----SIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRVLSGR 102 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~~~-----~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~~~~~ 102 (609)
..|++...+.|..+++...... ..+.........++++|++..|. +-..++.|..++...... ..........
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECTTCCC
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEECCCCC
Confidence 4555555557778887654321 11111123467899999766655 444678999999876432 2222222246
Q ss_pred eeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecC--CCeEEEEeCCCCce
Q 007283 103 IDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGE--DFLVNFYEGPPFKF 180 (609)
Q Consensus 103 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~--d~~i~~~~~~~~~~ 180 (609)
...++++|++.+|..+..+.. .+..+..+.................++++|++..++++... .+.|..++......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~--~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLD--RIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR 158 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred ccEEEEEecCCeEEEEECCCC--EEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc
Confidence 789999998777776654332 34444554332211222222456889999976654555433 35676665432211
Q ss_pred eeeccCcccceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEE
Q 007283 181 KLSHRGHSNFVNCVRFSPDGSKFISV-SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKV 259 (609)
Q Consensus 181 ~~~~~~h~~~v~~l~~s~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~i 259 (609)
.............++++|++..|..+ ...+.|..++.........+. ...+ -..++.. .+.++++....+.|..
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~---P~gi~~d-~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GLQY---PFAVTSY-GKNLYYTDWKTNSVIA 233 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CCCS---EEEEEEE-TTEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-CCCC---ceEEEEe-CCEEEEEECCCCeEEE
Confidence 11111223457889999987765544 456789999986543222221 1112 2455553 3444444445688999
Q ss_pred eecccCCCCceEEEec
Q 007283 260 WDISEDNHGKLKKTLT 275 (609)
Q Consensus 260 wd~~~~~~~~~~~~~~ 275 (609)
+|.. .++....+.
T Consensus 234 ~d~~---~g~~~~~i~ 246 (267)
T 1npe_A 234 MDLA---ISKEMDTFH 246 (267)
T ss_dssp EETT---TTEEEEEEC
T ss_pred EeCC---CCCceEEEc
Confidence 9875 355555553
No 236
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.50 E-value=0.002 Score=67.83 Aligned_cols=229 Identities=13% Similarity=-0.004 Sum_probs=122.1
Q ss_pred CeEEEeCCCEEEEEeCCCCc-cccccccCCCCcEEEEECCCCCEEEEEe-CCCcEEEEcCCCCceeeEEEeecccceeEE
Q 007283 29 NSILYTNGRSVIILDLSNPL-QVSIYGEHAYPATVARFSPNGEWIASAD-VSGTVRIWGAHNDHVLKKEFRVLSGRIDDL 106 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~-~~~~~~~h~~~v~~~~~sp~g~~las~~-~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~ 106 (609)
-.|++.+.+.|...++.... .....-..-.....++|++.+..|.-++ ..+.|+.++.+........+..-......+
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 35778888889999987643 2222222334578999999777666555 467888888765421112222222467899
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeeecc
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLSHR 185 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~~~ 185 (609)
++.+.+..|..+.... ..+.....+.......+.+.......++++|.+..++.+- +....|...+..-........
T Consensus 90 AvD~~~~~ly~~d~~~--~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~ 167 (619)
T 3s94_A 90 ACDWLGEKLYWTDSET--NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 167 (619)
T ss_dssp EEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEecCCEEEEEeCCC--CEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe
Confidence 9999887777765333 2455555554322222223444566889998766545543 334455544432111111112
Q ss_pred CcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 186 GHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
......+.|++++++..|..+. ..+.|...+...............|. .++++.++ ..+.+-...+.|...|..
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P---~gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHP---FALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------C---CCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCc---eEEEEeCC-EEEEecCCCCEEEEEECC
Confidence 2344568899999876665554 45677777765433221111011222 35566555 444454556777777754
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.49 E-value=4.8e-05 Score=81.47 Aligned_cols=240 Identities=13% Similarity=0.095 Sum_probs=145.1
Q ss_pred CCeEEEeCCCEEEEEeCCCCccccccccC-C----CCcEE-EEECCCCCEEEEEe-----CCCcEEEEcCCCCceeeEEE
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYGEH-A----YPATV-ARFSPNGEWIASAD-----VSGTVRIWGAHNDHVLKKEF 96 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~h-~----~~v~~-~~~sp~g~~las~~-----~d~~i~vWd~~~~~~~~~~~ 96 (609)
+..++...++.++.+|..+++++-.+..+ . ..+.. ..+ .++.+++..+ .++.|+.+|..+++.+- .+
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W-~~ 206 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKW-RW 206 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE-EE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEE-Ee
Confidence 33333345678999999988876555433 1 11211 111 1455544433 27899999999987543 23
Q ss_pred eeccc--------------------------------ceeEEEECCCCCEEEEEECCC------------C----cceEE
Q 007283 97 RVLSG--------------------------------RIDDLQWSPDGLRIVACGDGK------------G----KSLVR 128 (609)
Q Consensus 97 ~~~~~--------------------------------~v~~~~~spdg~~l~~~~~~~------------~----~~~~~ 128 (609)
..... ....++++|++.++.....+. + ...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 22111 113578889877666543211 0 01245
Q ss_pred EEEcCCCCeeEEEec--CC-------ccEEEEEEeeCCC--eEEEEecCCCeEEEEeCCCCceeeeccCc----------
Q 007283 129 AFMWDSGTNVGEFDG--HS-------RRVLSCAFKPSRP--FRIATCGEDFLVNFYEGPPFKFKLSHRGH---------- 187 (609)
Q Consensus 129 ~~~~~~~~~~~~~~~--h~-------~~v~~~~~~p~~~--~~i~t~~~d~~i~~~~~~~~~~~~~~~~h---------- 187 (609)
.++.++++.+..+.. |. ....-.....++. ..++.++.++.+.++|..+++....+.-.
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 556667777766643 21 1122234444663 45888999999999998888765432210
Q ss_pred -ccce------------------------EEEEEcCCCCEEEEEeC----------------------------------
Q 007283 188 -SNFV------------------------NCVRFSPDGSKFISVSS---------------------------------- 208 (609)
Q Consensus 188 -~~~v------------------------~~l~~s~dg~~l~s~~~---------------------------------- 208 (609)
...+ ..++|+|++.++.+...
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 0011 25688999887766543
Q ss_pred ---------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEecc
Q 007283 209 ---------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTP 276 (609)
Q Consensus 209 ---------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 276 (609)
.+.+..||..+++.+.... +...+.+..+.+++.+++.++.|+.++.||.. .++.+..+..
T Consensus 447 ~~~~~~~~~~g~l~A~D~~tG~~~W~~~----~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~---tG~~lw~~~~ 516 (677)
T 1kb0_A 447 NAEPPKSKPFGRLLAWDPVAQKAAWSVE----HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA---TGEKLWEAPT 516 (677)
T ss_dssp CSSCCCSCCEEEEEEEETTTTEEEEEEE----ESSSCCCCEEEETTTEEEEECTTSEEEEEETT---TCCEEEEEEC
T ss_pred ccccCCCCCccEEEEEeCCCCcEEeecC----CCCCCcCcceEeCCCEEEEECCCCcEEEEECC---CCceeeeeeC
Confidence 2678999999998776653 22334445566778888899999999999987 4666666543
No 238
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=0.0032 Score=68.91 Aligned_cols=520 Identities=10% Similarity=0.010 Sum_probs=265.4
Q ss_pred eeEEeecCCCC-eEEEeCCCEEEEEeCCCCcccccc-c---c---CCCCcEEEEECC--CCCEEEEEeCCCcEEEEcCCC
Q 007283 19 GILISGHPKSN-SILYTNGRSVIILDLSNPLQVSIY-G---E---HAYPATVARFSP--NGEWIASADVSGTVRIWGAHN 88 (609)
Q Consensus 19 ~~~~~~~~~~~-~l~~~~~~~~~i~~~~~~~~~~~~-~---~---h~~~v~~~~~sp--~g~~las~~~d~~i~vWd~~~ 88 (609)
...|...++|. .-+.+.++.+..||..+.+-.... . . ....|.++...+ +|++.+.. .++.+..++..+
T Consensus 68 I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t-~~~gl~~~~~~~ 146 (781)
T 3v9f_A 68 LNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCT-YYRGIEYLDIAT 146 (781)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEE-SSSCEEEEETTT
T ss_pred cceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEE-CCCCeeEEECCC
Confidence 44677777787 555555436888998765432211 1 1 123588998888 88876643 344577788766
Q ss_pred CceeeEEEee------cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEe--------cCCccEEEEEEe
Q 007283 89 DHVLKKEFRV------LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD--------GHSRRVLSCAFK 154 (609)
Q Consensus 89 ~~~~~~~~~~------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~~~~~ 154 (609)
++.. .+.. ....|.++...++|...+.... .+ +..++-.... ...+. -....|.++...
T Consensus 147 ~~~~--~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~-~G---l~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~d 219 (781)
T 3v9f_A 147 GKFT--HYNKSTVPALPSEQTWTATEAEDGKLYIGHVE-GG---LSILSLNDKS-VKHFVHDPQNPNSLPGNDVRCIYKD 219 (781)
T ss_dssp TEEE--EESTTTCTTCSCCCEEEEEEEETTEEEEEETT-TE---EEEEETTTTE-EEEECC--------CCSSEEEEEEC
T ss_pred CeEE--eeccCcccCCCccceEEEEECCCCCEEEEecC-CC---eEEEcCCCCc-eEeeecCCCCcccCCCCceeEEEEc
Confidence 5421 1211 1245788888888876665422 11 1222222221 11221 013468888888
Q ss_pred eCCCeEEEEecCCCeEEEEeCCCCceeeecc-------CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccC
Q 007283 155 PSRPFRIATCGEDFLVNFYEGPPFKFKLSHR-------GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELS 227 (609)
Q Consensus 155 p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~ 227 (609)
+++..-++ ..+ -+..|+....+...-.. -....|.++...++|. |..|+..+-+.+++..+........
T Consensus 220 ~~g~lwig--t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~ 295 (781)
T 3v9f_A 220 TNGNIWIG--TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQ 295 (781)
T ss_dssp TTCCEEEE--ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC-------
T ss_pred CCCCEEEE--eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeec
Confidence 88764333 334 47778866544332111 1235689999988886 4557765678888876654221110
Q ss_pred -----------cCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEeccC----CCCCc-cceEEEEEE
Q 007283 228 -----------PEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLTPS----GSGGV-DDMLVGCLW 291 (609)
Q Consensus 228 -----------~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~ 291 (609)
...-....|.++...++|.+. .|+.++-|..++.... . ...+... ..... ...+.+...
T Consensus 296 ~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~---~-~~~~~~~~~~~~~~~l~~~~v~~i~~ 370 (781)
T 3v9f_A 296 IRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGGGINFISNAPP---T-FHTWSYSPTQMNESSLSNKVVSSVCD 370 (781)
T ss_dssp --CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCC---S-CEEEC----CCCSSCCSSSCEEEEEE
T ss_pred cccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCC---c-ceeeccCccccccCCCCCcceEEEEE
Confidence 001134579999999888644 5555677888886532 1 1122110 01111 122233332
Q ss_pred c-CCeEEEEEcCCcEEEEeCCCCCCCce--eeeCCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecc--cc
Q 007283 292 Q-NDFLVIVSLGGTISIFSANDLEKSPL--QLSGHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQR--KE 366 (609)
Q Consensus 292 ~-~~~~~~~~~~g~i~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~--~~ 366 (609)
. ...+.+++.++.+..++......... ........|.++.... ++ .+..|+.++-+..++...+....... ..
T Consensus 371 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~ 448 (781)
T 3v9f_A 371 DGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EG-NLWFGTYLGNISYYNTRLKKFQIIELEKNE 448 (781)
T ss_dssp CTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TS-CEEEEETTEEEEEECSSSCEEEECCSTTTC
T ss_pred cCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CC-CEEEEeccCCEEEEcCCCCcEEEeccCCCC
Confidence 3 45677777677777776532110000 0012335677776532 33 34456666667777665432222211 12
Q ss_pred ccceeEeeee-CCcEEEEeccceEEEEeccCCccccccccc-cC-CCCceeEeeccC-CcEEEEEecccEEEeeCC-eee
Q 007283 367 NSQIKCFAAI-EEEIVTSGFDNKIWRVSLQGDQCGYANSID-IG-SQPKDLSVALHY-PELVLVSTDSGVVLLRGA-EVV 441 (609)
Q Consensus 367 ~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~ 441 (609)
...+.++... .+.+..+.. .-+.+++............. .. .......+..+. +.+.+.+...|+..+... ...
T Consensus 449 ~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~ 527 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV 527 (781)
T ss_dssp CCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE
T ss_pred CCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE
Confidence 2345555544 445666655 56777765543321110000 00 011122333333 334444444676666422 222
Q ss_pred EEecc-----CCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecC-CCceEEEEECCCCCEEEEEeCCCeE
Q 007283 442 STINL-----RFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKH-RGAVSVIRYSPDVSMFASGDVNREA 515 (609)
Q Consensus 442 ~~~~~-----~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h-~~~i~~v~~s~~~~~l~s~s~d~~v 515 (609)
..+.. ...+.++...++|...++. .+|.|..|+.+++.+.......+- ...|.++...++|.+.+++ .+| +
T Consensus 528 ~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l 604 (781)
T 3v9f_A 528 RKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-I 604 (781)
T ss_dssp EEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-E
T ss_pred EEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc-CCc-e
Confidence 22221 2346788888888866554 466557887665543211110111 2357888888899877764 344 7
Q ss_pred EEEEccCCceEEee-ecC---CCCceEEEEECCCCcEEEEEeCCCeEEEEEc
Q 007283 516 IVWDRVSREVKLKN-MLY---HTARINCLAWSPNNSMVATGSLDTCVIIYEI 563 (609)
Q Consensus 516 ~iwd~~~~~~~~~~-~~~---h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~ 563 (609)
..+|..+.....-. ..+ ..-...++...++|++++ |+.+| +..++.
T Consensus 605 ~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~~G-l~~f~p 654 (781)
T 3v9f_A 605 SCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSING-LCFFNP 654 (781)
T ss_dssp EEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EETTE-EEEECS
T ss_pred EEEECCCCceEEecccCCccccccccCceEECCCCEEEE-ECCCc-eEEECh
Confidence 77786654432110 011 111235777788888665 66677 444553
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.48 E-value=4.7e-05 Score=81.77 Aligned_cols=268 Identities=12% Similarity=0.072 Sum_probs=151.4
Q ss_pred CCCEEEEEeCCCCccccccccCCCC----------c-EEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEee--ccc
Q 007283 35 NGRSVIILDLSNPLQVSIYGEHAYP----------A-TVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRV--LSG 101 (609)
Q Consensus 35 ~~~~~~i~~~~~~~~~~~~~~h~~~----------v-~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~--~~~ 101 (609)
..+.++.+|..+++++-.+..+... + ..+++ .+..|+.++.|+.|..+|..+++.+-. +.. ...
T Consensus 78 ~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~-~~~~~~~~ 154 (689)
T 1yiq_A 78 PFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS-VDTRADHK 154 (689)
T ss_dssp GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE-EECCSCTT
T ss_pred CCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee-ecCcCCCC
Confidence 3467888888888876544432210 1 11222 356777788899999999999875432 322 111
Q ss_pred ceeEEEECC---CCCEEEEEECCC--CcceEEEEEcCCCCeeEEEecCC-------------------------------
Q 007283 102 RIDDLQWSP---DGLRIVACGDGK--GKSLVRAFMWDSGTNVGEFDGHS------------------------------- 145 (609)
Q Consensus 102 ~v~~~~~sp---dg~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~------------------------------- 145 (609)
....+..+| ++..++..+... ....+..++-++++.+..+....
T Consensus 155 ~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~ 234 (689)
T 1yiq_A 155 RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGG 234 (689)
T ss_dssp SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEEC
T ss_pred CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCC
Confidence 112222233 554444322110 12346666767788777664210
Q ss_pred ccEEEEEEeeCCCeEEEEecCCC-------------------eEEEEeCCCCceeeeccC--cc-------cceEEEEEc
Q 007283 146 RRVLSCAFKPSRPFRIATCGEDF-------------------LVNFYEGPPFKFKLSHRG--HS-------NFVNCVRFS 197 (609)
Q Consensus 146 ~~v~~~~~~p~~~~~i~t~~~d~-------------------~i~~~~~~~~~~~~~~~~--h~-------~~v~~l~~s 197 (609)
..-...+++|++.. +..+..++ .+..+|..+++..-.+.. |. .........
T Consensus 235 ~~w~~~~~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~ 313 (689)
T 1yiq_A 235 TAWDSFAYDPELNL-LYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELP 313 (689)
T ss_dssp CCCSCEEEETTTTE-EEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred ccccceeEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeec
Confidence 00124678887775 55565554 388889888877655432 31 112222222
Q ss_pred CCCC---EEEEEeCCCcEEEEeCCCCccccccCcCC-------------------------CCcc-----------ceEE
Q 007283 198 PDGS---KFISVSSDKKGIIYDGKTADKIGELSPED-------------------------GHKG-----------SVYA 238 (609)
Q Consensus 198 ~dg~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~h~~-----------~V~~ 238 (609)
.+|+ .++.++.+|.++++|.++++.+....... .... .-..
T Consensus 314 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~ 393 (689)
T 1yiq_A 314 IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQP 393 (689)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSC
T ss_pred cCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCc
Confidence 3565 68888999999999999998763221100 0000 0123
Q ss_pred EEECCCCCeEEEEeC---------------------------------------------CCcEEEeecccCCCCceEEE
Q 007283 239 VSWSPDGKQVLTASA---------------------------------------------DKSAKVWDISEDNHGKLKKT 273 (609)
Q Consensus 239 l~~spd~~~l~s~s~---------------------------------------------d~~i~iwd~~~~~~~~~~~~ 273 (609)
++|+|+..+++.... +|.|+.||+. .++.+-.
T Consensus 394 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~---tG~~~W~ 470 (689)
T 1yiq_A 394 MSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV---KQQAAWE 470 (689)
T ss_dssp CEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT---TTEEEEE
T ss_pred ceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC---CCCeEeE
Confidence 688888877776532 3668888876 3444433
Q ss_pred eccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEEeCCCC
Q 007283 274 LTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIFSANDL 313 (609)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~ 313 (609)
...... .... .....+.+++.++.++.++.|+....
T Consensus 471 ~~~~~~--~~~g--~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 471 VPYVTI--FNGG--TLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp EEESSS--CCCC--EEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccCCCC--ccCc--cceECCCEEEEECCCCcEEEEECCCC
Confidence 322211 0111 12235678888999999999997654
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.44 E-value=0.00079 Score=66.50 Aligned_cols=299 Identities=9% Similarity=0.011 Sum_probs=156.5
Q ss_pred CCEEEEEeCCCcEEEEcCCCCceeeEEEeec---------ccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeE
Q 007283 69 GEWIASADVSGTVRIWGAHNDHVLKKEFRVL---------SGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVG 139 (609)
Q Consensus 69 g~~las~~~d~~i~vWd~~~~~~~~~~~~~~---------~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 139 (609)
+..|..++.++.|..+|..+++.+- .+... ...+...-- .++.++++...+. .+..++-++++.+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~g---~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIW-SVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGSEKA---QVYALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEE-EEECCC---CCSCCCCCEEEEEE-EETTEEEEEETTS---EEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceee-eecCccccccccccCcccccCce-EeCCEEEEEcCCC---EEEEEECCCCCEEE
Confidence 5566667778899999998877542 22221 112221111 1233444443221 34455656677666
Q ss_pred EEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccce-----EEEEEcCCCCEEEEEeCCCcEEE
Q 007283 140 EFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFV-----NCVRFSPDGSKFISVSSDKKGII 214 (609)
Q Consensus 140 ~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v-----~~l~~s~dg~~l~s~~~d~~i~i 214 (609)
.............. .++ .+..+..++.+..+|..+++..-.+....... ...... +..++.++.++.+..
T Consensus 128 ~~~~~~~~~~~p~~-~~~--~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 128 QTKVAGEALSRPVV-SDG--LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEECSSCCCSCCEE-ETT--EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEE
T ss_pred EEeCCCceEcCCEE-ECC--EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE
Confidence 55443221111122 233 46677788889999988777654433221110 111222 346777888999999
Q ss_pred EeCCCCccccccCcCCCCcc-----ceEEEEECC--CCCeEEEEeCCCcEEEeecccCCCCceEEEeccCCCCCccceEE
Q 007283 215 YDGKTADKIGELSPEDGHKG-----SVYAVSWSP--DGKQVLTASADKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLV 287 (609)
Q Consensus 215 wd~~~~~~~~~~~~~~~h~~-----~V~~l~~sp--d~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (609)
+|..+++.+...... ...+ .+..+.-.| .+..++.++.++.+..+|... ++..-...... ..
T Consensus 203 ~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t---G~~~w~~~~~~-------~~ 271 (376)
T 3q7m_A 203 VLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS---GQIMWKRELGS-------VN 271 (376)
T ss_dssp EETTTCCEEEEEECC-C-----------CCCCCCEEETTEEEEECTTSCEEEEETTT---CCEEEEECCCC-------EE
T ss_pred EECCCCcEEEEEecc-cCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC---CcEEeeccCCC-------CC
Confidence 999988876554211 0000 000011112 245677778899999999863 44443332111 12
Q ss_pred EEEEcCCeEEEEEcCCcEEEEeCCCCCCCceeee-CCCCCeEEEEEecCCCCEEEEEecCCcEEEEecCccccceecccc
Q 007283 288 GCLWQNDFLVIVSLGGTISIFSANDLEKSPLQLS-GHMKNVTALTVLNIDPKVILSSSYDGLIVKWIQGIGYGGKLQRKE 366 (609)
Q Consensus 288 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~~~~~~~~~~ 366 (609)
.....++.+++++.++.+..++...... ..... .....+...... +..++.++.+|.+..++..++.........
T Consensus 272 ~~~~~~~~l~~~~~~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~---~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~ 347 (376)
T 3q7m_A 272 DFIVDGNRIYLVDQNDRVMALTIDGGVT-LWTQSDLLHRLLTSPVLY---NGNLVVGDSEGYLHWINVEDGRFVAQQKVD 347 (376)
T ss_dssp EEEEETTEEEEEETTCCEEEEETTTCCE-EEEECTTTTSCCCCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECC
T ss_pred CceEECCEEEEEcCCCeEEEEECCCCcE-EEeecccCCCcccCCEEE---CCEEEEEeCCCeEEEEECCCCcEEEEEecC
Confidence 2334577888888888998888754421 11111 111122222222 256788888999999987765432111110
Q ss_pred ccce-eEeeeeCCcEEEEeccceEEEE
Q 007283 367 NSQI-KCFAAIEEEIVTSGFDNKIWRV 392 (609)
Q Consensus 367 ~~~~-~~~~~~~~~~~~~~~d~~i~~~ 392 (609)
...+ ......++.++....++.++.+
T Consensus 348 ~~~~~~~~~~~~~~l~v~~~~G~l~~~ 374 (376)
T 3q7m_A 348 SSGFQTEPVAADGKLLIQAKDGTVYSI 374 (376)
T ss_dssp TTCBCSCCEEETTEEEEEBTTSCEEEE
T ss_pred CCcceeCCEEECCEEEEEeCCCEEEEE
Confidence 1111 1122345566666666666655
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.38 E-value=1.2e-07 Score=93.91 Aligned_cols=179 Identities=8% Similarity=-0.057 Sum_probs=93.0
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCcc
Q 007283 68 NGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRR 147 (609)
Q Consensus 68 ~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 147 (609)
++.+|++++.|+.|..||..+++.+ ..+.. +.+.+..+.+++..+++.+.+. .++.++.++++.+..+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~-W~~~~--~~~~s~p~~~~g~~~v~~s~dg---~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIK-WTLKE--DPVLQVPTHVEEPAFLPDPNDG---SLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEE-EEEEC--CCSCCCC-----CCEEECTTTC---CEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEE-EEecC--CCceecceEcCCCEEEEeCCCC---EEEEEECCCCceeeeeeccCcc
Confidence 5778889999999999999998754 33443 4555555667776655532221 2333333356555555433211
Q ss_pred -EEE-EEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccc
Q 007283 148 -VLS-CAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGE 225 (609)
Q Consensus 148 -v~~-~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~ 225 (609)
+.+ ..+. .+. .+++++.|+.+..||..+++....+..+. ...++|++..+++++.|+.+..||.++++.+..
T Consensus 82 ~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 82 LVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HHTTCSCC-------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred ccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 110 0111 222 46778888999999998887766655443 235677888899999999999999999887655
Q ss_pred cCcCCCCccceEEEEECCCC---CeEEEEeCCCcEEEeecc
Q 007283 226 LSPEDGHKGSVYAVSWSPDG---KQVLTASADKSAKVWDIS 263 (609)
Q Consensus 226 ~~~~~~h~~~V~~l~~spd~---~~l~s~s~d~~i~iwd~~ 263 (609)
+.. .......+.++. ..++.++.|+.++.||..
T Consensus 156 ~~~-----~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 156 ATY-----FDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp EEE-----EEECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred Eec-----ccccCccccCCccccceEEEECCCCEEEEEECC
Confidence 421 111223344432 567778899999999986
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.34 E-value=0.00012 Score=78.49 Aligned_cols=240 Identities=12% Similarity=0.073 Sum_probs=142.2
Q ss_pred CCeEEEeCCCEEEEEeCCCCcccccccc--CCCCcEEEEECC---CCCEEEEEe-----CCCcEEEEcCCCCceeeEEEe
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYGE--HAYPATVARFSP---NGEWIASAD-----VSGTVRIWGAHNDHVLKKEFR 97 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~--h~~~v~~~~~sp---~g~~las~~-----~d~~i~vWd~~~~~~~~~~~~ 97 (609)
+..++...++.++.+|..+++++-.+.. +......+..+| +|..++..+ .++.|+.||..+++.+- .+.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W-~~~ 200 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW-RFY 200 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE-EEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEE-Eec
Confidence 3333333467889999988887544432 211111222233 666665433 37899999999987543 232
Q ss_pred ecc-------------------------------cceeEEEECCCCCEEEEEECCCC------------c----ceEEEE
Q 007283 98 VLS-------------------------------GRIDDLQWSPDGLRIVACGDGKG------------K----SLVRAF 130 (609)
Q Consensus 98 ~~~-------------------------------~~v~~~~~spdg~~l~~~~~~~~------------~----~~~~~~ 130 (609)
... .....++++|++.++.....+.. . ..+..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 110 01125788888766555432210 0 125567
Q ss_pred EcCCCCeeEEEec--CC-------ccEEEEEEeeCCC--eEEEEecCCCeEEEEeCCCCceeeecc--C-----------
Q 007283 131 MWDSGTNVGEFDG--HS-------RRVLSCAFKPSRP--FRIATCGEDFLVNFYEGPPFKFKLSHR--G----------- 186 (609)
Q Consensus 131 ~~~~~~~~~~~~~--h~-------~~v~~~~~~p~~~--~~i~t~~~d~~i~~~~~~~~~~~~~~~--~----------- 186 (609)
+.++++.+..+.. |. .+........++. ..++.++.++.+.++|..+++...... .
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 7778888877653 21 1222223333443 257888999999999988887652110 0
Q ss_pred ---------------ccc-----------ceEEEEEcCCCCEEEEEeC--------------------------------
Q 007283 187 ---------------HSN-----------FVNCVRFSPDGSKFISVSS-------------------------------- 208 (609)
Q Consensus 187 ---------------h~~-----------~v~~l~~s~dg~~l~s~~~-------------------------------- 208 (609)
... .-..++|+|+..++.+...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 000 0123688998777666532
Q ss_pred -------------CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 209 -------------DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 209 -------------d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
++.+..||..+++.+..... ...+..-.++..+.+++.++.|+.++.||.+ .++.+-.+.
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~tagglvf~gt~dg~l~a~D~~---tG~~lw~~~ 513 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY----VTIFNGGTLSTAGNLVFEGSADGRVIAYAAD---TGEKLWEQP 513 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETT---TCCEEEEEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccC----CCCccCccceECCCEEEEECCCCcEEEEECC---CCccceeee
Confidence 36789999999987766532 1223333556678899999999999999987 466665554
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.34 E-value=3.3e-05 Score=74.86 Aligned_cols=217 Identities=9% Similarity=-0.038 Sum_probs=136.5
Q ss_pred CCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEE
Q 007283 27 KSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDL 106 (609)
Q Consensus 27 ~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~ 106 (609)
++...+...++.+..+|.. ++....+..+...+.++.+.++|++.+ +..++.|..+|.. ++. ...+......+..+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~ 182 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD-GTE-KWRFKTNDAITSAA 182 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT-SCE-EEEEECSSCCCSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC-CCE-eEEEecCCCceeee
Confidence 4554444456788889987 555444444555577788888888555 5567889999987 543 23344445567788
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccC
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRG 186 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~ 186 (609)
.+.++|..+++. +. +..++ ..+..+..+......+.++...+++. +..+..++.+..++. .++....+..
T Consensus 183 ~~d~~g~l~v~t--~~----l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 183 SIGKDGTIYFGS--DK----VYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp EECTTCCEEEES--SS----EEEEC-TTSCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEEEECT-TSCEEEEEEC
T ss_pred EEcCCCEEEEEe--CE----EEEEC-CCCcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEEEECC-CCCEeEEeeC
Confidence 888888766654 11 23333 34455555555556677888888775 444555666777763 3443333333
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 187 HSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 187 h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
....+.++.+.++|. |..++.++.+..+|. +++.+..+.. ....+.++...++|+ |..++.+|.+++....
T Consensus 253 ~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~---~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 253 GKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFET---GSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp SSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEEC---SSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred CCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEc---CCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 333344566666665 666888888999996 5655444321 234466777777776 4557789999988754
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.30 E-value=0.00026 Score=68.36 Aligned_cols=237 Identities=11% Similarity=0.021 Sum_probs=133.3
Q ss_pred eeEEeecCCCCeEEEe-CCCEEEEEeCCCCccccccc------------c--------CCCCcEEEEECC-CCCEEEEEe
Q 007283 19 GILISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYG------------E--------HAYPATVARFSP-NGEWIASAD 76 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~------------~--------h~~~v~~~~~sp-~g~~las~~ 76 (609)
|-.+..+|+|+.++.. .++.+..|+..++.... +. + .......+++.| +|+++++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 4467788888745443 45788888876644321 21 0 013478899998 777666543
Q ss_pred CCCcEEEEcCCCCceeeEEEeec-----ccceeEEEECC-CCCEEEEEECCC------------CcceEEEEEcCCC-Ce
Q 007283 77 VSGTVRIWGAHNDHVLKKEFRVL-----SGRIDDLQWSP-DGLRIVACGDGK------------GKSLVRAFMWDSG-TN 137 (609)
Q Consensus 77 ~d~~i~vWd~~~~~~~~~~~~~~-----~~~v~~~~~sp-dg~~l~~~~~~~------------~~~~~~~~~~~~~-~~ 137 (609)
.+.|..+|..++... .+... ......+++.| +|...++-.... .....+++.++.. ..
T Consensus 100 -~~~i~~~d~~~g~~~--~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 100 -YYHLSVVGSEGGHAT--QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp -TTEEEEECTTCEECE--EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred -CCCEEEEeCCCCEEE--EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 344888887654321 12111 12467899999 997766643210 0011234444432 22
Q ss_pred eEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCC---ceeeeccCcccceEEEEEcCCCCEEEEEeC------
Q 007283 138 VGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPF---KFKLSHRGHSNFVNCVRFSPDGSKFISVSS------ 208 (609)
Q Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~---~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~------ 208 (609)
+..+.........++++|++..++++-...+.|..++.... ... .+..... ...+++.++|+++++...
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~-~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE-VLVKIPN-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE-EEEECSS-EEEEEECTTSCEEEEEEEETTSST
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccc-eEEeCCC-CCCeEECCCCCEEEEecCcccccc
Confidence 22222112234568999998865566566677777775431 111 1111112 577899999986666544
Q ss_pred ----CCcEEEEeCCCCccccccCcCCCC-ccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 209 ----DKKGIIYDGKTADKIGELSPEDGH-KGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 209 ----d~~i~iwd~~~~~~~~~~~~~~~h-~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.+.+..+|.. ++.+..+....+. -..+.++++ .+++++++....+.|..+++.
T Consensus 255 ~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 255 HGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred cCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4568888864 5554444221111 234566666 466666666677888888875
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.30 E-value=0.00011 Score=67.69 Aligned_cols=196 Identities=10% Similarity=0.085 Sum_probs=125.3
Q ss_pred CcEEEEECCCCCEEEEEeC--CCcEEEEcCCCCceeeEEEeeccc-ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC
Q 007283 59 PATVARFSPNGEWIASADV--SGTVRIWGAHNDHVLKKEFRVLSG-RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG 135 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~--d~~i~vWd~~~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 135 (609)
....++|+|||++.++.+. +++|++.|..+++.+.. +..... ....+++ +|.+|....-... .+.+++.++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~-i~l~~~~fgeGi~~--~g~~lyv~t~~~~--~v~viD~~t~ 96 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI-HKMDDSYFGEGLTL--LNEKLYQVVWLKN--IGFIYDRRTL 96 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE-EECCTTCCEEEEEE--ETTEEEEEETTCS--EEEEEETTTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE-EecCCCcceEEEEE--eCCEEEEEEecCC--EEEEEECCCC
Confidence 3578999999877666543 67999999999886543 322121 1223444 4667766653322 3556666666
Q ss_pred CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc-C-c---ccceEEEEEcCCCCEEEEEeCCC
Q 007283 136 TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR-G-H---SNFVNCVRFSPDGSKFISVSSDK 210 (609)
Q Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~-~-h---~~~v~~l~~s~dg~~l~s~~~d~ 210 (609)
+.+..+.--... ...+++++...+++- .++.+.+.|..+.+...... + + ...++.+.|. +|..++....++
T Consensus 97 ~v~~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 97 SNIKNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEEEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred cEEEEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 667776422111 234667877656554 57789999988877655432 1 1 1246788888 776666655678
Q ss_pred cEEEEeCCCCccccccCcC--------CCC--ccceEEEEECCCCCe-EEEEeCCCcEEEeecc
Q 007283 211 KGIIYDGKTADKIGELSPE--------DGH--KGSVYAVSWSPDGKQ-VLTASADKSAKVWDIS 263 (609)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~--------~~h--~~~V~~l~~spd~~~-l~s~s~d~~i~iwd~~ 263 (609)
.|.+.|..+++.+..+... ..+ ....+.++|+|+++. ++++...+++...++.
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 9999999999887666421 001 124589999999864 5555567888888765
No 246
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.26 E-value=4.7e-07 Score=89.64 Aligned_cols=195 Identities=11% Similarity=0.078 Sum_probs=95.4
Q ss_pred eCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeeccc-cee-EEEECCC
Q 007283 34 TNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSG-RID-DLQWSPD 111 (609)
Q Consensus 34 ~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~-~v~-~~~~spd 111 (609)
..++.++.||..+++.+-.+.. +.+.+..+.++|+++++++.|+.|+.||..+++.+. .++.+.. .+. ..+++.+
T Consensus 16 s~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~~~~sp~~~~~ 92 (369)
T 2hz6_A 16 TLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPELVQASPCRSSD 92 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE-ECSCCHHHHHTTCSCC---
T ss_pred cCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee-eeeccCccccccCceEecC
Confidence 3457899999999888766655 456666677888888888899999999998876432 2222211 111 1122233
Q ss_pred CCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccCcccce
Q 007283 112 GLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRGHSNFV 191 (609)
Q Consensus 112 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~~~v 191 (609)
+ .+++.+. ...+..++.++++.+..+..+.. ..++|++. .+++++.|+.+..||..+++..-.+..+. .
T Consensus 93 ~-~v~~g~~---dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~ 161 (369)
T 2hz6_A 93 G-ILYMGKK---QDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTS-LLYLGRTEYTITMYDTKTRELRWNATYFD--Y 161 (369)
T ss_dssp ---CCCCEE---EEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--E
T ss_pred C-EEEEEeC---CCEEEEEECCCCcEEEEecCCCc----ccccccCC-EEEEEecCCEEEEEECCCCCEEEeEeccc--c
Confidence 4 3333221 11244455456666665554431 24456555 47778889999999988776543332111 1
Q ss_pred EEEEEcCCC---CEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceE-EEEECCCCC
Q 007283 192 NCVRFSPDG---SKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVY-AVSWSPDGK 246 (609)
Q Consensus 192 ~~l~~s~dg---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~-~l~~spd~~ 246 (609)
....++++. ..+++++.|+.+..||..+++.+.... ..+.+. ...+++++.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~----~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN----YASPVVAFYVWQREGL 216 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE----CSSCEEEEEECTTSSC
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec----CCCceEEEEEecCCce
Confidence 222344432 457778999999999999998766543 223343 334555554
No 247
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.25 E-value=0.00015 Score=78.87 Aligned_cols=201 Identities=10% Similarity=0.120 Sum_probs=110.3
Q ss_pred cCCC-CcEEEEEC-CCCCEEEEE-eCCC----cEEEEcCCCC-ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcce
Q 007283 55 EHAY-PATVARFS-PNGEWIASA-DVSG----TVRIWGAHND-HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSL 126 (609)
Q Consensus 55 ~h~~-~v~~~~~s-p~g~~las~-~~d~----~i~vWd~~~~-~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~ 126 (609)
+|.. .+..++|| |||++||-+ +.+| +|+++|+.++ +.+...+. .....++|+|||+.|+.+..+.....
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence 4554 67889999 999999843 3333 5999999887 53221121 22457899999999888765432222
Q ss_pred EEEEEcCCCCe----eEEEe-cCCccEEEEEEeeCCCeEEEEecC--CCeEEEEeCCCC--ce--eeeccCcccceEEEE
Q 007283 127 VRAFMWDSGTN----VGEFD-GHSRRVLSCAFKPSRPFRIATCGE--DFLVNFYEGPPF--KF--KLSHRGHSNFVNCVR 195 (609)
Q Consensus 127 ~~~~~~~~~~~----~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~--d~~i~~~~~~~~--~~--~~~~~~h~~~v~~l~ 195 (609)
.+++.++.+.. ...+. .+......+.|+|++..++.+... ...+.+++.... +. .....+.......+.
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 34555554321 22333 233456788999999976655533 234566676543 22 222333444455555
Q ss_pred EcCCCCEEEEEeC-C----CcEEEEeCCCCccccc-cCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEee
Q 007283 196 FSPDGSKFISVSS-D----KKGIIYDGKTADKIGE-LSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWD 261 (609)
Q Consensus 196 ~s~dg~~l~s~~~-d----~~i~iwd~~~~~~~~~-~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd 261 (609)
|+. |+.|+..+. + ..+..++..++..... +... .....+..+.+. .+.++++...++..++|-
T Consensus 327 ~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 327 MHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred eee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 543 555554443 3 2566667654222222 2111 111245556554 234556666677655553
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.24 E-value=0.00021 Score=65.09 Aligned_cols=185 Identities=15% Similarity=0.171 Sum_probs=117.2
Q ss_pred CcEEEEECCCCCEEEEEeCCC--cEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC
Q 007283 59 PATVARFSPNGEWIASADVSG--TVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT 136 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~--~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 136 (609)
....+.|+ ++.+..+.+.+| .|++.|..+++++.. +.. ..........+++.+|....-.. ..+.+++.++.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~-~~l-~~~~FgeGit~~g~~ly~ltw~~--~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQ-IEL-GKRYFGEGISDWKDKIVGLTWKN--GLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEE-EEC-CTTCCEEEEEEETTEEEEEESSS--SEEEEEETTTCC
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEE-Eec-CCccceeEEEEeCCEEEEEEeeC--CEEEEEECccCc
Confidence 35788998 777777777766 899999999886543 332 23333333344566666654222 245566666777
Q ss_pred eeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeecc----Ccc-cceEEEEEcCCCCEEEEEeCCCc
Q 007283 137 NVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHR----GHS-NFVNCVRFSPDGSKFISVSSDKK 211 (609)
Q Consensus 137 ~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~----~h~-~~v~~l~~s~dg~~l~s~~~d~~ 211 (609)
.+.++.-.. ....+.+++..++++-+ ...+.+.|..+++...... +.. ..++.+.|. +|+.++..-.+..
T Consensus 119 ~~~ti~~~~---eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~ 193 (262)
T 3nol_A 119 QVRSFNYDG---EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK 193 (262)
T ss_dssp EEEEEECSS---CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEEEEECCC---CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe
Confidence 777776322 22344466765455544 6778999988877655432 222 345667776 7776665556889
Q ss_pred EEEEeCCCCccccccCcCC---------CCccceEEEEECCCCCeEEEEeC
Q 007283 212 GIIYDGKTADKIGELSPED---------GHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~---------~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
|.+.|.++++.+..+.... .-...-+.|+|+|+++.|+..+.
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999999766553210 01134589999999887777664
No 249
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.17 E-value=0.012 Score=62.04 Aligned_cols=205 Identities=6% Similarity=-0.079 Sum_probs=112.7
Q ss_pred cCceeEEeecCCCCeEEEeC--CCEEEEEeCCCCcc-ccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCce
Q 007283 16 RGRGILISGHPKSNSILYTN--GRSVIILDLSNPLQ-VSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHV 91 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~-~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~ 91 (609)
-+.|..+.+++.++.|++.. .+.|..+++..... ...+..--.....+|+.+.++.|. +-...+.|.+-+.+...
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~- 117 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL- 117 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-
Confidence 45688999999888887763 47888888865432 222322224578999999666555 44567889999887543
Q ss_pred eeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeE
Q 007283 92 LKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLV 170 (609)
Q Consensus 92 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i 170 (609)
........-.....+++.|.+.+|..+.-+.. ..+.....+. .....+ ...-.....++++|++..++.+=...+.|
T Consensus 118 ~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~-~~I~r~~~dG-~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 118 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PKIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp CEEEECSSCSCCCCEEEETTTTEEEEEECSSS-CEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEEeCCCCCCceEEEecCCCeEEEeccCCC-CEEEEEECCC-CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 22222223345778999997666665542321 2232333332 222222 23344568899998776555554555667
Q ss_pred EEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccc
Q 007283 171 NFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIG 224 (609)
Q Consensus 171 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~ 224 (609)
...+...........+.......|++..+ ..+++-...+.|...|..+++...
T Consensus 196 ~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~ 248 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLR 248 (619)
T ss_dssp EEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCE
T ss_pred EEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccE
Confidence 77765432222111212222345566555 334443456678888877665443
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.14 E-value=0.0031 Score=60.21 Aligned_cols=223 Identities=10% Similarity=0.000 Sum_probs=124.3
Q ss_pred CceeEEeecCCCCeEEEe-CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCc--EEEEcCCCCceee
Q 007283 17 GRGILISGHPKSNSILYT-NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGT--VRIWGAHNDHVLK 93 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~--i~vWd~~~~~~~~ 93 (609)
..|-.+..+|+|+.++.. .++.|..+|...... ..+. -.+....++++|+|+++++...... |..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 355678899998855554 457888888765332 2222 2345889999999997776543333 5555655655321
Q ss_pred EEEee-cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC---eeEEEe---------cCCccEEEEEEeeCCCeE
Q 007283 94 KEFRV-LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT---NVGEFD---------GHSRRVLSCAFKPSRPFR 160 (609)
Q Consensus 94 ~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------~h~~~v~~~~~~p~~~~~ 160 (609)
.... .......++..+++..++ .....+ ++|.++... .+.... +.......+ +|++..+
T Consensus 110 -~~~~~~~~~~~g~~~~~~~~~~v-~d~~~g----~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 110 -LLTLPDAIFLNGITPLSDTQYLT-ADSYRG----AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp -EEECTTCSCEEEEEESSSSEEEE-EETTTT----EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred -EEeCCCccccCcccccCCCcEEE-EECCCC----eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 1111 112234455556554333 322222 244444321 111000 111233444 7888776
Q ss_pred EEEecCCCeEEEEeCCC-Cce--eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc--ccccCcCCCCccc
Q 007283 161 IATCGEDFLVNFYEGPP-FKF--KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK--IGELSPEDGHKGS 235 (609)
Q Consensus 161 i~t~~~d~~i~~~~~~~-~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~--~~~~~~~~~h~~~ 235 (609)
+++-...+.|..++... ++. ...+. .......++++++|+++++-...+.|.+++.. ++. +..+. .....
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~---~~~~~ 256 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE---QGVIG 256 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG---GTCTT
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc---cccCC
Confidence 77777778888888653 221 11111 11234567899999877766677899999875 443 21221 11245
Q ss_pred eEEEEEC---CCCCeEEEEeCC
Q 007283 236 VYAVSWS---PDGKQVLTASAD 254 (609)
Q Consensus 236 V~~l~~s---pd~~~l~s~s~d 254 (609)
.++++|. ||+..|+..+..
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEECT
T ss_pred ceEEEEecccCCCCEEEEECCC
Confidence 7899998 887766665543
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.12 E-value=0.00026 Score=77.03 Aligned_cols=192 Identities=7% Similarity=0.001 Sum_probs=105.8
Q ss_pred eEEeec-CCCCeEEEeC---C---CEEEEEeCCCC-cccc-ccccCCCCcEEEEECCCCCEEEEEeCCC-----cEEEEc
Q 007283 20 ILISGH-PKSNSILYTN---G---RSVIILDLSNP-LQVS-IYGEHAYPATVARFSPNGEWIASADVSG-----TVRIWG 85 (609)
Q Consensus 20 ~~~~~~-~~~~~l~~~~---~---~~~~i~~~~~~-~~~~-~~~~h~~~v~~~~~sp~g~~las~~~d~-----~i~vWd 85 (609)
....++ |||+.|+|.. | ..+.++|+.++ +.+. .+. .....++|+|||+.|+....|. .|.+++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 367889 9999999873 2 25999999887 5321 111 1134678999999888666542 567777
Q ss_pred CCCCcee-eEEEee-cccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC-ee--EEE-ecCCccEEEEEEeeCCCe
Q 007283 86 AHNDHVL-KKEFRV-LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT-NV--GEF-DGHSRRVLSCAFKPSRPF 159 (609)
Q Consensus 86 ~~~~~~~-~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~-~~--~~~-~~h~~~v~~~~~~p~~~~ 159 (609)
+.++... ...+.. .......+.|||||++|+..........+.+++.+.+. .. ..+ .+......+..|+.++.
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~- 332 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH- 332 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE-
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE-
Confidence 7664311 112222 12345678999999999877644444444455555431 12 333 23344555565554443
Q ss_pred EEEEecCC----CeEEEEeCCC-CceeeeccCccc--ceEEEEEcCCCC-EEEEEeCCCcEEE--EeC
Q 007283 160 RIATCGED----FLVNFYEGPP-FKFKLSHRGHSN--FVNCVRFSPDGS-KFISVSSDKKGII--YDG 217 (609)
Q Consensus 160 ~i~t~~~d----~~i~~~~~~~-~~~~~~~~~h~~--~v~~l~~s~dg~-~l~s~~~d~~i~i--wd~ 217 (609)
++.....+ ..+..++... ......+..|.. .+..+.+. ++ ++++...++...| ++.
T Consensus 333 l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 34444433 3455556543 222210112222 34555554 44 4556666775544 454
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.09 E-value=0.00096 Score=64.31 Aligned_cols=235 Identities=12% Similarity=0.104 Sum_probs=128.4
Q ss_pred cEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEee--------------------cccceeEEEECC-CCCEEEEE
Q 007283 60 ATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRV--------------------LSGRIDDLQWSP-DGLRIVAC 118 (609)
Q Consensus 60 v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~--------------------~~~~v~~~~~sp-dg~~l~~~ 118 (609)
-..++++|+|+++.++..++.|..|+..+++.. .+.. ....+..+++.| +|..+++
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~- 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV--DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV- 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE--EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE--EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-
Confidence 456789999997777878899999988765432 2221 012468899998 6654444
Q ss_pred ECCCCcceEEEEEcCCCCeeEEEec-----CCccEEEEEEee-CCCeEEEEec----------------CCCeEEEEeCC
Q 007283 119 GDGKGKSLVRAFMWDSGTNVGEFDG-----HSRRVLSCAFKP-SRPFRIATCG----------------EDFLVNFYEGP 176 (609)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p-~~~~~i~t~~----------------~d~~i~~~~~~ 176 (609)
..+. . +..++.+.+ .+..+.. .......+++.| ++...++..+ .++.+..++..
T Consensus 98 d~~~--~-i~~~d~~~g-~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 98 DCYY--H-LSVVGSEGG-HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp ETTT--E-EEEECTTCE-ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred ECCC--C-EEEEeCCCC-EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 2221 1 223332222 1222211 123467899999 8865444322 13567777765
Q ss_pred CCceeeeccCcccceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCcc--ccccCcCCCCccceEEEEECCCCCeEEEEeC
Q 007283 177 PFKFKLSHRGHSNFVNCVRFSPDGSKFISV-SSDKKGIIYDGKTADK--IGELSPEDGHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 177 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~-~~d~~i~iwd~~~~~~--~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
..+..... ......+.++|+|+|+.|..+ ...+.|..++...... ...+.. ..+ -..+++.++|.+.++...
T Consensus 174 ~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~---~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 174 TKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK---IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE---CSS-EEEEEECTTSCEEEEEEE
T ss_pred CCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe---CCC-CCCeEECCCCCEEEEecC
Confidence 55433221 112335678999999865555 5568899998764321 111111 112 577899999987776654
Q ss_pred ----------CCcEEEeecccCCCCceEEEeccCCCCCccceEEEEEEcCCeEEEEE-cCCcEEEEeCC
Q 007283 254 ----------DKSAKVWDISEDNHGKLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVS-LGGTISIFSAN 311 (609)
Q Consensus 254 ----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~i~~~~~~ 311 (609)
.+.|..+|.. ++....+........... ..+...+..+++++ ..+.|..+++.
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~----G~~~~~~~~~~g~~~~~~-~~~~~~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF----GNILEVIPLPPPFAGEHF-EQIQEHDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT----SCEEEEEECCTTTTTSCC-CEEEEETTEEEEECSSCSEEEEEEC-
T ss_pred cccccccCCCccEEEEECCC----CCEEEEEECCCCCccccc-eEEEEeCCEEEEeecCCCceEEEecc
Confidence 3567777753 455555543211111111 12223444555443 45566666643
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.03 E-value=0.001 Score=60.58 Aligned_cols=183 Identities=12% Similarity=0.102 Sum_probs=113.6
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV 138 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (609)
....+.|+ ++++..+.+.+|.|++.|..+++++... ........-..+++.+|....-.. ..+.+++.++.+.+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~--~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTE--GLLFTWSGMPPQRE 129 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSS--CEEEEEETTTTEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccC--CEEEEEECCcCcEE
Confidence 35788887 4677778888889999999998876543 223333322233444555443211 23556666666777
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccC--cc---cceEEEEEcCCCCEEEEEeCCCcEE
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRG--HS---NFVNCVRFSPDGSKFISVSSDKKGI 213 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~--h~---~~v~~l~~s~dg~~l~s~~~d~~i~ 213 (609)
.++.-.. .=..+ .+++..++++- .+..+.+.|..+++......- +. ..++-+.|. +|+.++..-.+..|.
T Consensus 130 ~ti~~~~-eGwGL--t~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 130 RTTRYSG-EGWGL--CYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp EEEECSS-CCCCE--EEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred EEEeCCC-ceeEE--ecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 7765322 11233 35666545554 477899999888776654321 21 245677777 776666555678999
Q ss_pred EEeCCCCccccccCcC----------CCCccceEEEEECCCCCeEEEEe
Q 007283 214 IYDGKTADKIGELSPE----------DGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 214 iwd~~~~~~~~~~~~~----------~~h~~~V~~l~~spd~~~l~s~s 252 (609)
+.|.++++.+..+... ..-...-+.|++.|+++.|+..+
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999876654321 01123568999999877666554
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.98 E-value=0.0074 Score=55.17 Aligned_cols=193 Identities=8% Similarity=0.054 Sum_probs=124.9
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCCcccccc--ccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIY--GEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~--~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
+..-.++..|+++.|+... ...++..|+. ++..+.+ .+. .....+++.++|+++++...++.+.+.++......
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 4566899999888776543 3678888887 6655544 332 46888999999998888767788888887654321
Q ss_pred --eEEEe------ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC---CCeeEEEe-------cCCccEEEEEEe
Q 007283 93 --KKEFR------VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS---GTNVGEFD-------GHSRRVLSCAFK 154 (609)
Q Consensus 93 --~~~~~------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~h~~~v~~~~~~ 154 (609)
....+ ..+.....++|+|++++|.++.+... ..++.|+. ...+..+. .+...+.+++++
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p---~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP---IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS---EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC---ceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 12221 12345689999999988888775543 24555541 11122221 123457899999
Q ss_pred eCCCeEEEEecCCCeEEEEeCCCCcee--eecc-Cc------ccceEEEEEcCCCCEEEEEeCCCcEEEEe
Q 007283 155 PSRPFRIATCGEDFLVNFYEGPPFKFK--LSHR-GH------SNFVNCVRFSPDGSKFISVSSDKKGIIYD 216 (609)
Q Consensus 155 p~~~~~i~t~~~d~~i~~~~~~~~~~~--~~~~-~h------~~~v~~l~~s~dg~~l~s~~~d~~i~iwd 216 (609)
|.....++.......+..+|.. ++.. ..+. +. -.+...|+|.++|+++++ ++-..++.+.
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 9888777777888888888854 3222 2222 21 236789999999985555 5555444443
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.95 E-value=0.015 Score=55.55 Aligned_cols=229 Identities=9% Similarity=-0.076 Sum_probs=129.4
Q ss_pred eEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCC---ceeeEEEeecccceeE
Q 007283 30 SILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHND---HVLKKEFRVLSGRIDD 105 (609)
Q Consensus 30 ~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~---~~~~~~~~~~~~~v~~ 105 (609)
.|++.++..|...|+........... -.....++|++.+..|. +-..++.|+.++.... ......+.........
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEEECCCeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 56777777888889877655443332 34578999998766555 4445788999988651 1111112222235678
Q ss_pred EEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC-CeEEEEeCCCCceeeec
Q 007283 106 LQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED-FLVNFYEGPPFKFKLSH 184 (609)
Q Consensus 106 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d-~~i~~~~~~~~~~~~~~ 184 (609)
+++.+.+..|..+.... ..+.+.+.+.......+.........++++|.+..++.+.... +.|...+..........
T Consensus 82 lavd~~~~~ly~~d~~~--~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~ 159 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 159 (316)
T ss_dssp EEEETTTTEEEEEETTT--TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred EEEeecCCeEEEEECCC--CEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEE
Confidence 99998766666554332 2345555553332222333445678999999777655554333 56666654321111111
Q ss_pred cCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 185 RGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 185 ~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.......+.++++|++..|..+. ..+.|..+|..... ...+......-..-..+++. .+.++.+-...+.|..++..
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 22334578899999877665554 55688888876432 22221100111224566664 35555566667788888753
No 256
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.94 E-value=0.052 Score=61.37 Aligned_cols=145 Identities=14% Similarity=0.200 Sum_probs=92.6
Q ss_pred CCEEEEEe----------CCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEEEEccCCceEEe
Q 007283 459 GSEAIIGS----------QDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLK 528 (609)
Q Consensus 459 g~~l~~gs----------~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~~~~ 528 (609)
..++++|+ ..|.|++|++..+++... .-...+++|.+++-= +|+++|+ ....+++|++...+....
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv-~~~~v~g~v~al~~~-~g~Lla~--ig~~l~vy~l~~~~~L~~ 919 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTV-AEKEVKGAVYSMVEF-NGKLLAS--INSTVRLYEWTTEKELRT 919 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEE-EEEEESSCEEEEEEE-TTEEEEE--ETTEEEEEEECTTSCEEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEE-EEEEcCCcCEEEeee-CCEEEEE--cCCEEEEEECCCCceEEE
Confidence 47888887 347899999976554322 223457889888632 4554444 347899999865432211
Q ss_pred eecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeE-eccccCCeEEEEEcCCCeEEEEeCCCcEEEEEcc
Q 007283 529 NMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTI-KGAHLGGVYGLAFTDEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 529 ~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~l~s~s~D~~i~~W~~~ 607 (609)
... +-..|..+.....+.+++.|+.-..|.+.........+..+ ..-+..+++++.|-++..++.+-.++++.+...+
T Consensus 920 ~~~-~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 920 ECN-HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EEE-ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEEC
T ss_pred Eee-ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecC
Confidence 111 11123333333357789999999988887664322222222 2345678999999877788889999999998776
Q ss_pred C
Q 007283 608 P 608 (609)
Q Consensus 608 ~ 608 (609)
+
T Consensus 999 ~ 999 (1158)
T 3ei3_A 999 S 999 (1158)
T ss_dssp T
T ss_pred C
Confidence 5
No 257
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.92 E-value=0.003 Score=58.12 Aligned_cols=192 Identities=11% Similarity=-0.029 Sum_probs=118.9
Q ss_pred ceeEEeecCCCCeEEEeC---CCEEEEEeCCCCcccccccc-CCCCcEEEEECCCCCEE-EEEeCCCcEEEEcCCCCcee
Q 007283 18 RGILISGHPKSNSILYTN---GRSVIILDLSNPLQVSIYGE-HAYPATVARFSPNGEWI-ASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~---~~~~~i~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l-as~~~d~~i~vWd~~~~~~~ 92 (609)
.+-.+.++|||...++.. ++.+.++|+.+++....+.- .......++++ |+.| ++.-.++++-++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 344677888864334332 37999999999988765431 11122344454 5455 45556899999999887654
Q ss_pred eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEec--CC---ccEEEEEEeeCCCeEEEEecCC
Q 007283 93 KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDG--HS---RRVLSCAFKPSRPFRIATCGED 167 (609)
Q Consensus 93 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~---~~v~~~~~~p~~~~~i~t~~~d 167 (609)
. ++..- .-....+++||++|+.+ ++. ..+.+.+-++.+.+..+.- +. ..++.+.|. ++ .+++....+
T Consensus 100 ~-~i~~g--~~~g~glt~Dg~~l~vs-~gs--~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~ 171 (266)
T 2iwa_A 100 K-NFTHQ--MKDGWGLATDGKILYGS-DGT--SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQT 171 (266)
T ss_dssp E-EEECC--SSSCCEEEECSSSEEEE-CSS--SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTS
T ss_pred E-EEECC--CCCeEEEEECCCEEEEE-CCC--CeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCCC
Confidence 3 34432 11234577798888765 343 2455555555555555431 11 236677887 55 456776667
Q ss_pred CeEEEEeCCCCceeeecc--Cc-----------ccceEEEEEcCCCCE-EEEEeCCCcEEEEeCCC
Q 007283 168 FLVNFYEGPPFKFKLSHR--GH-----------SNFVNCVRFSPDGSK-FISVSSDKKGIIYDGKT 219 (609)
Q Consensus 168 ~~i~~~~~~~~~~~~~~~--~h-----------~~~v~~l~~s~dg~~-l~s~~~d~~i~iwd~~~ 219 (609)
..|.+-|..+++....+. +- ....+.++|+|+++. ++++.....+...+...
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 788888988887655432 11 135689999999874 55555677777776544
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.90 E-value=0.0093 Score=58.92 Aligned_cols=202 Identities=8% Similarity=-0.065 Sum_probs=114.3
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEE-EEEeCCCcEEEEcCCCCceee
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWI-ASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l-as~~~d~~i~vWd~~~~~~~~ 93 (609)
..+..+.+++.++.|++.. .+.|..+++........+.........+++.+.+..| .+-...+.|.+.+.+.... .
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~ 194 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 194 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-E
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-E
Confidence 3567888888777777663 4788888887655433333222345678999865555 4555567888888764331 1
Q ss_pred EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 94 KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 94 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
..+...-.....+++.|++.+|..+..+. ...+.....+.. ....+ .........++++|++..++.+=...+.|..
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 22222234578999999877777654333 122333333322 22222 2333456789999877765666566677888
Q ss_pred EeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~ 222 (609)
++...................+++ .++..+++-...+.|..++..+++.
T Consensus 273 ~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 273 ANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp ECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 875432222122222333455666 3344445544556666666444443
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.89 E-value=0.0032 Score=67.29 Aligned_cols=113 Identities=14% Similarity=0.128 Sum_probs=68.6
Q ss_pred EEEEeeCCCeEEEEecCCC-----------eEEEEeCCCCceee--ec-cCcccceEEEEEcCCCCEEEEEeC-CCcEEE
Q 007283 150 SCAFKPSRPFRIATCGEDF-----------LVNFYEGPPFKFKL--SH-RGHSNFVNCVRFSPDGSKFISVSS-DKKGII 214 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~-----------~i~~~~~~~~~~~~--~~-~~h~~~v~~l~~s~dg~~l~s~~~-d~~i~i 214 (609)
.+++.|.+..+++.||.+. .+.+||..+.+... .+ ..+.....++++.++|++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 5667773334567766432 46788876654432 12 122233345778899999999884 558999
Q ss_pred EeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEe-CC-----CcEEEeeccc
Q 007283 215 YDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTAS-AD-----KSAKVWDISE 264 (609)
Q Consensus 215 wd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s-~d-----~~i~iwd~~~ 264 (609)
||..+.+.. .+... .....-.+++..+++++++.|+ .+ ..+.+||...
T Consensus 270 yd~~t~~W~-~~~~~-~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 270 YDSSSDSWI-PGPDM-QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEGGGTEEE-ECCCC-SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred ecCcCCcee-ECCCC-CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 998765432 22111 1112223556678999999888 34 5688999864
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.004 Score=56.12 Aligned_cols=186 Identities=9% Similarity=0.033 Sum_probs=113.6
Q ss_pred CCcEEEEECCCCCEEEEEeCC--CcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC
Q 007283 58 YPATVARFSPNGEWIASADVS--GTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG 135 (609)
Q Consensus 58 ~~v~~~~~sp~g~~las~~~d--~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 135 (609)
.....+.|++ +++..|.+.+ ..|+..|..+++++.. ... ..........+++.+|....-.. ..+.+++.++.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~-~~l-~~~~fgeGi~~~~~~ly~ltw~~--~~v~v~D~~tl 95 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQR-AEV-PPPYFGAGIVAWRDRLIQLTWRN--HEGFVYDLATL 95 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEE-EEC-CTTCCEEEEEEETTEEEEEESSS--SEEEEEETTTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEE-EeC-CCCcceeEEEEeCCEEEEEEeeC--CEEEEEECCcC
Confidence 3467899987 6666666665 4899999999886543 322 22332233333456666554222 23455666666
Q ss_pred CeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeeeccC--cc---cceEEEEEcCCCCEEEEEeCCC
Q 007283 136 TNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLSHRG--HS---NFVNCVRFSPDGSKFISVSSDK 210 (609)
Q Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~~~~--h~---~~v~~l~~s~dg~~l~s~~~d~ 210 (609)
+.+.++.-... ...+.+++...+++-+ +..+.++|..+++......- +. ..++-+.+. +|+.++..-.+.
T Consensus 96 ~~~~ti~~~~~---Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 96 TPRARFRYPGE---GWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp EEEEEEECSSC---CCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred cEEEEEeCCCC---ceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 66777653222 2233466665555544 77899999888776554321 11 345666665 676666555677
Q ss_pred cEEEEeCCCCccccccCcC-----C-----CCccceEEEEECCCCCeEEEEeC
Q 007283 211 KGIIYDGKTADKIGELSPE-----D-----GHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 211 ~i~iwd~~~~~~~~~~~~~-----~-----~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
.|.+.|.++++.+..+... . .-...-+.|+++|+++.|+..+.
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 9999999999876654311 0 11234689999998876666654
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.86 E-value=0.016 Score=56.39 Aligned_cols=201 Identities=8% Similarity=-0.066 Sum_probs=112.3
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEE-EEEeCCCcEEEEcCCCCceee
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWI-ASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l-as~~~d~~i~vWd~~~~~~~~ 93 (609)
.++..+.+++.++.|++.. .+.|..+++............-.....+++.+.+..| .+-...+.|.+.+.+.... .
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~ 151 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K 151 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-E
Confidence 3567888888777777663 4788888887655433332222346789999865555 5555677899988765431 1
Q ss_pred EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeEEE
Q 007283 94 KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLVNF 172 (609)
Q Consensus 94 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~ 172 (609)
..+...-.....+++.|++.+|..+..+.. ..+.....+. .....+ .........++++|++..++.+-...+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~-~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSS-CEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCC-CEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 122222345689999997777766543331 2233333332 222222 2223456789999877765666566677888
Q ss_pred EeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 007283 173 YEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTAD 221 (609)
Q Consensus 173 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~ 221 (609)
++...................+++ .++..+++-...+.|..++..+++
T Consensus 230 ~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 230 ANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCC
T ss_pred EeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCC
Confidence 775432221112222333455555 233344443445555555543443
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.85 E-value=0.0015 Score=69.95 Aligned_cols=231 Identities=13% Similarity=0.057 Sum_probs=124.1
Q ss_pred eEEeecC-CCCeEEEeCC------------CEEEEEeCCCCccccc--c-ccCCCCcEEEEECCCCCEEEEEe-CCCcEE
Q 007283 20 ILISGHP-KSNSILYTNG------------RSVIILDLSNPLQVSI--Y-GEHAYPATVARFSPNGEWIASAD-VSGTVR 82 (609)
Q Consensus 20 ~~~~~~~-~~~~l~~~~~------------~~~~i~~~~~~~~~~~--~-~~h~~~v~~~~~sp~g~~las~~-~d~~i~ 82 (609)
..+++.| +|+.++..+. ..+.+||..+++.... + ..+......+++.++|++++.|+ .+.++.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 4667777 7776666421 2678999988764332 1 12333344578889999999987 456899
Q ss_pred EEcCCCCceeeEEEeecc-cc-eeEEEECCCCCEEEEEE-CCCC--cceEEEEEcCCCCeeE------------------
Q 007283 83 IWGAHNDHVLKKEFRVLS-GR-IDDLQWSPDGLRIVACG-DGKG--KSLVRAFMWDSGTNVG------------------ 139 (609)
Q Consensus 83 vWd~~~~~~~~~~~~~~~-~~-v~~~~~spdg~~l~~~~-~~~~--~~~~~~~~~~~~~~~~------------------ 139 (609)
+||..+.+-. ...... .. -.+++..+||+.++..| .+.. ...+.+++..+++-..
T Consensus 269 ~yd~~t~~W~--~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 269 LYDSSSDSWI--PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEGGGTEEE--ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred EecCcCCcee--ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 9998775411 111111 11 23456668898777766 2211 1223333333221100
Q ss_pred -------EEecCCc---------------------------------------cEEEEEEeeCCCeEEEEecCCC-----
Q 007283 140 -------EFDGHSR---------------------------------------RVLSCAFKPSRPFRIATCGEDF----- 168 (609)
Q Consensus 140 -------~~~~h~~---------------------------------------~v~~~~~~p~~~~~i~t~~~d~----- 168 (609)
.+-+..+ .-.++.|...+..+++.||.+.
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 0000000 0112233333445677777432
Q ss_pred ------eEEEEeCCCCceeeec---cCcccceEEEEEcCCCCEEEEEeCC-----------CcEEEEeCCCCccccccCc
Q 007283 169 ------LVNFYEGPPFKFKLSH---RGHSNFVNCVRFSPDGSKFISVSSD-----------KKGIIYDGKTADKIGELSP 228 (609)
Q Consensus 169 ------~i~~~~~~~~~~~~~~---~~h~~~v~~l~~s~dg~~l~s~~~d-----------~~i~iwd~~~~~~~~~~~~ 228 (609)
.+.+||..+.+..... ....+.-.++...|+|+.++.|+.+ ..+.+||..+.+. ..+..
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W-~~~~~ 505 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF-YKQNP 505 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE-EECCC
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce-eecCC
Confidence 5667776554443322 1122333455677899999998854 4678999876542 22221
Q ss_pred CCCCccceEEEEECCCCCeEEEEeC
Q 007283 229 EDGHKGSVYAVSWSPDGKQVLTASA 253 (609)
Q Consensus 229 ~~~h~~~V~~l~~spd~~~l~s~s~ 253 (609)
............+.||++.++.||.
T Consensus 506 ~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 506 NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCccccccHhhcCCCcEEEecCCC
Confidence 1111112234556799999999885
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.84 E-value=0.011 Score=59.43 Aligned_cols=239 Identities=9% Similarity=0.023 Sum_probs=128.3
Q ss_pred ceeEEeecCC--CCeEEEeC-CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCC---Cc-EEEEcCCCCc
Q 007283 18 RGILISGHPK--SNSILYTN-GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVS---GT-VRIWGAHNDH 90 (609)
Q Consensus 18 ~~~~~~~~~~--~~~l~~~~-~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d---~~-i~vWd~~~~~ 90 (609)
+|..++++|+ +..|+... ++.|..+++.++...... +.......++|+|+|+++++-... .. +...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 5778999985 33454443 378899998776665433 333458899999999965554321 22 2222222211
Q ss_pred eeeEEEeecccceeEEEECC-CCCEEEEEECCCCcceEEEEEcCCCCeeEEE-e-cCCccEEEEEEeeCCCeEEEEecCC
Q 007283 91 VLKKEFRVLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-D-GHSRRVLSCAFKPSRPFRIATCGED 167 (609)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~p~~~~~i~t~~~d 167 (609)
.....+.. -.....++++| +|..+++ ... ...++.++.+.+.....+ . +....-..++|+|++..++++-...
T Consensus 219 ~~~~~~~~-~~~P~giavd~~~G~lyv~-d~~--~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 219 TERLSLCN-ARGAKTCAVHPQNGKIYYT-RYH--HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp CCEEEEEE-CSSBCCCEECTTTCCEEEC-BTT--CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred eccccccc-cCCCCEEEEeCCCCeEEEE-ECC--CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 11111221 23456789999 6654444 211 122333333333321222 1 1122234699999998656666667
Q ss_pred CeEEEEeCC--CCcee--eeccC---------------cccceEEEEE---------cCCCCEEEEEeCCCcEEEEeCCC
Q 007283 168 FLVNFYEGP--PFKFK--LSHRG---------------HSNFVNCVRF---------SPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 168 ~~i~~~~~~--~~~~~--~~~~~---------------h~~~v~~l~~---------s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
+.|..++.. ..... ..+.+ ....-..+++ .++|.++++=.....|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 788876633 22111 11111 1223567888 677776666666778888874 3
Q ss_pred CccccccCc----CCC----------CccceEEEEEC-CCCCeEEEEeCCCcEEEeec
Q 007283 220 ADKIGELSP----EDG----------HKGSVYAVSWS-PDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 220 ~~~~~~~~~----~~~----------h~~~V~~l~~s-pd~~~l~s~s~d~~i~iwd~ 262 (609)
+........ ..+ .-..-..|++. ++|.++++-...+.|+.+++
T Consensus 374 G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 374 GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 322111100 001 01224678888 66776666666777777765
No 264
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.83 E-value=0.00082 Score=68.71 Aligned_cols=196 Identities=12% Similarity=0.095 Sum_probs=119.5
Q ss_pred EEEECC-----CCCEEEEEe-CCCcEEEEcCCCCceeeEEEeec-ccceeEEEE-C-CCCCEEEEEEC--------C---
Q 007283 62 VARFSP-----NGEWIASAD-VSGTVRIWGAHNDHVLKKEFRVL-SGRIDDLQW-S-PDGLRIVACGD--------G--- 121 (609)
Q Consensus 62 ~~~~sp-----~g~~las~~-~d~~i~vWd~~~~~~~~~~~~~~-~~~v~~~~~-s-pdg~~l~~~~~--------~--- 121 (609)
.+.+|. ||++|.... .+..|.+-|+.+.++.. .+..- ......+++ + |+++++++.+. +
T Consensus 89 h~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~-ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 89 HVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDA-ILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp CEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEE-EEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred ccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEee-EEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 355665 999987555 56679999999876433 22322 245778888 5 99999988862 1
Q ss_pred ----CCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC--------------CeE-------------
Q 007283 122 ----KGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED--------------FLV------------- 170 (609)
Q Consensus 122 ----~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d--------------~~i------------- 170 (609)
.....+.+.+-++.+.+.++.--. .-.-++++|++.+.++++... ..+
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 112245555555555455443111 224577899999877777543 122
Q ss_pred ----------EEEeCCC--Cce-eeeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCcc------------cc
Q 007283 171 ----------NFYEGPP--FKF-KLSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADK------------IG 224 (609)
Q Consensus 171 ----------~~~~~~~--~~~-~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~------------~~ 224 (609)
.+-|... .+. ..... -.....++.++|||+++++++ .+.++.++|..+.+. ..
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE
Confidence 2333332 111 11110 012345789999999766555 578999999886531 11
Q ss_pred ccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeeccc
Q 007283 225 ELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISE 264 (609)
Q Consensus 225 ~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~ 264 (609)
.+. -...-..++|+|+|...++.-.|++|..||+..
T Consensus 326 ~v~----vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 326 EPE----LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCB----CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EcC----CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 111 123468899999994445566799999999864
No 265
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.82 E-value=0.018 Score=55.40 Aligned_cols=229 Identities=11% Similarity=0.073 Sum_probs=119.8
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccc---cCCCCcEEEEECCCCCEEEEEeCCCcE-EEEcCCCCceee
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYG---EHAYPATVARFSPNGEWIASADVSGTV-RIWGAHNDHVLK 93 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~---~h~~~v~~~~~sp~g~~las~~~d~~i-~vWd~~~~~~~~ 93 (609)
....|.++| +..++......+ +.....++...... .+.+.+..+.+.+++++++.+. ++.| |-+|- ++.-.
T Consensus 81 ~~~~i~~~~-~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~Dg--G~tW~ 155 (327)
T 2xbg_A 81 RFNSVSFQG-NEGWIVGEPPIM-LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDS--GKNWQ 155 (327)
T ss_dssp EEEEEEEET-TEEEEEEETTEE-EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESST--TSSEE
T ss_pred cEEEEEecC-CeEEEEECCCeE-EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCC--CCCCE
Confidence 344677776 333333322322 23333344332222 2345678888888888888775 4544 33332 22111
Q ss_pred EEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC-CCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeEE
Q 007283 94 KEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS-GTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLVN 171 (609)
Q Consensus 94 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~ 171 (609)
.........+..+++.|+++.+++...+. +. ..++. +..-..+ ......+..+++.|++.. + ..+.++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~g~~G~---~~--~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~-~-~~~~~G~~~ 228 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSPSGEYVAVSSRGS---FY--STWEPGQTAWEPHNRTTSRRLHNMGFTPDGRL-W-MIVNGGKIA 228 (327)
T ss_dssp EEECSCCCCEEEEEECTTSCEEEEETTSS---EE--EEECTTCSSCEEEECCSSSCEEEEEECTTSCE-E-EEETTTEEE
T ss_pred EeecCCCcceEEEEEcCCCcEEEEECCCc---EE--EEeCCCCCceeECCCCCCCccceeEECCCCCE-E-EEeCCceEE
Confidence 11223345688999999987665542221 22 22332 2211111 234567888899888763 3 344566666
Q ss_pred EEe---CCCCceeeec-cCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCe
Q 007283 172 FYE---GPPFKFKLSH-RGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQ 247 (609)
Q Consensus 172 ~~~---~~~~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~ 247 (609)
... ..+++..... ..+...+.++.+.+++..++.+ .++.+. +....++....+.....+...+.++.|.++++
T Consensus 229 ~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i~-~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~- 305 (327)
T 2xbg_A 229 FSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGALL-CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ- 305 (327)
T ss_dssp EEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCEE-EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-
T ss_pred EecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeEE-EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-
Confidence 663 2222211111 1123458899999888766654 466663 33334444433321112345678888876554
Q ss_pred EEEEeCCCcEEEee
Q 007283 248 VLTASADKSAKVWD 261 (609)
Q Consensus 248 l~s~s~d~~i~iwd 261 (609)
++.++.+|.|.-++
T Consensus 306 ~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 306 GFILGQKGILLRYV 319 (327)
T ss_dssp EEEECSTTEEEEEC
T ss_pred eEEEcCCceEEEEc
Confidence 55666788877665
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.78 E-value=0.036 Score=54.65 Aligned_cols=227 Identities=10% Similarity=-0.059 Sum_probs=130.2
Q ss_pred CCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEeecccceeEE
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDL 106 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~ 106 (609)
...|++.+...|...++..........+ -.....++|++.+..|. +-...+.|+.++....... ..+.........+
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~~~~~~~p~gl 164 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVVSTGLESPGGL 164 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-EEECSSCSCCCCE
T ss_pred cceeEeecCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-EEEeCCCCCccEE
Confidence 4567777777888888876554433333 34578999998665555 4446788999988765421 1222222345778
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC-CeEEEEeCCCCceeeecc
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED-FLVNFYEGPPFKFKLSHR 185 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d-~~i~~~~~~~~~~~~~~~ 185 (609)
++.+.+..|..+..+.. .+.....+.......+.........++++|.+..++.+-... +.|...+...........
T Consensus 165 avd~~~g~lY~~d~~~~--~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTS--RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp EEETTTTEEEEEETTTT--EEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEeCCCeEEEEcCCCC--eEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 99987767666543332 233333332222222333345678899999877656555444 667666644222222222
Q ss_pred CcccceEEEEEcCCCCEEEEE-eCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 186 GHSNFVNCVRFSPDGSKFISV-SSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
......+.|+|+|++..|..+ +..+.|..++.........+. ..-..-..+++ ..+.++.+-...+.|..++.
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~---~~~~~P~giav-~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS---QGLPHPFAITV-FEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC---SSCSSEEEEEE-ETTEEEEEETTTTEEEEEET
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE---CCCCCceEEEE-ECCEEEEeeCCCCeEEEEEC
Confidence 233456889999876655555 445678888865433221111 11223456677 34455556666777877773
No 267
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.0031 Score=57.43 Aligned_cols=162 Identities=12% Similarity=0.112 Sum_probs=106.6
Q ss_pred eeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCcc-EEEEEEeeCCCeEEEEecCCCeEEEEeCCCCcee
Q 007283 103 IDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRR-VLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFK 181 (609)
Q Consensus 103 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~ 181 (609)
...+.|+ |+..+++.|+. +.+.++..+.++++.+..+.-.... -..+++ ++..+....-.++.+.++|..+++..
T Consensus 45 tqGL~~~-~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcEE
Confidence 4788998 77666666643 3446778888888877776543322 233444 45555666667889999999998877
Q ss_pred eeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCC-CCc-cceEEEEECCCCCeEEEEeCCCcEEE
Q 007283 182 LSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPED-GHK-GSVYAVSWSPDGKQVLTASADKSAKV 259 (609)
Q Consensus 182 ~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~h~-~~V~~l~~spd~~~l~s~s~d~~i~i 259 (609)
.++.-.. ....+++|++.|+.+..+..+.++|..+.+.+.++.... +.. ..++.+.|. +|+..+....+..|.+
T Consensus 121 ~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 121 RSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 6654221 112345678777766667789999999988777664321 111 335567776 7777766667888999
Q ss_pred eecccCCCCceEEEec
Q 007283 260 WDISEDNHGKLKKTLT 275 (609)
Q Consensus 260 wd~~~~~~~~~~~~~~ 275 (609)
.|.. .++....+.
T Consensus 197 IDp~---tG~V~~~Id 209 (262)
T 3nol_A 197 IDPE---TGKVTGIID 209 (262)
T ss_dssp ECTT---TCBEEEEEE
T ss_pred EECC---CCcEEEEEE
Confidence 9876 455655554
No 268
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.77 E-value=0.058 Score=56.80 Aligned_cols=208 Identities=8% Similarity=-0.087 Sum_probs=119.1
Q ss_pred CCccCcCceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCC
Q 007283 11 VPSTERGRGILISGHPKSNSILYTN--GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAH 87 (609)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~ 87 (609)
+|.+.-+.+..|.++++++.|++.. .+.|..+++........+..-......+|+.+.++.|. +-...+.|.+-+.+
T Consensus 31 ~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 31 IPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp CCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 3433345788999999888887763 47888888865544333332224577899998766554 44456788888876
Q ss_pred CCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC
Q 007283 88 NDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED 167 (609)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d 167 (609)
.... ...+...-.....+++.|...+|..+.-+.. ..+.....+ +.....+...-.....+++++++..+..+=...
T Consensus 111 G~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~-~~I~r~~~d-G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 111 GQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGK-PKIDRAAMD-GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp STTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSS-CEEEEEETT-SCSCEEEECSCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCC-CEEEEEeCC-CCceEEEECCCCCcceEEEccccCEEEEEECCC
Confidence 5431 1112222345689999996555555432211 122222223 222333333445678899999877655555666
Q ss_pred CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccc
Q 007283 168 FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKI 223 (609)
Q Consensus 168 ~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~ 223 (609)
+.|...+....... .+.........+++.. +..+++-...+.|...|..+++..
T Consensus 188 ~~I~~~d~dG~~~~-v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 188 NLIESSNMLGLNRE-VIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp TEEEEEETTSCSCE-EEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred CEEEEEcCCCCceE-EeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 77777775432221 2222233345666654 344455445677877776666543
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.75 E-value=0.0092 Score=63.71 Aligned_cols=189 Identities=13% Similarity=0.108 Sum_probs=105.1
Q ss_pred EEeCCCEEEEEeCCCCccccccccCCCC----------c-EEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecc
Q 007283 32 LYTNGRSVIILDLSNPLQVSIYGEHAYP----------A-TVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLS 100 (609)
Q Consensus 32 ~~~~~~~~~i~~~~~~~~~~~~~~h~~~----------v-~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~ 100 (609)
+....+.++.+|..+++++-.+...... + ..+++ .+..|+.++.|+.|..+|..+++.+- .+....
T Consensus 71 v~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W-~~~~~~ 147 (668)
T 1kv9_A 71 TSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIW-SQQTTD 147 (668)
T ss_dssp EEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEE-EEECSC
T ss_pred EECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEee-eeccCC
Confidence 3334567888888888875444322110 1 11222 34567777889999999999987543 232211
Q ss_pred -cceeEEEECC---CCCEEEEEECCC--CcceEEEEEcCCCCeeEEEecC---Cc-------------------------
Q 007283 101 -GRIDDLQWSP---DGLRIVACGDGK--GKSLVRAFMWDSGTNVGEFDGH---SR------------------------- 146 (609)
Q Consensus 101 -~~v~~~~~sp---dg~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h---~~------------------------- 146 (609)
.....+.-+| ++..++..+... ....+..++-++++.+..+... ..
T Consensus 148 ~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~ 227 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGG 227 (668)
T ss_dssp TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCE
T ss_pred CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCC
Confidence 0011111122 443333222110 1234666677777777766421 00
Q ss_pred ---cEEEEEEeeCCCeEEEEecCCC-------------------eEEEEeCCCCceeeecc--Ccc-------cceEEEE
Q 007283 147 ---RVLSCAFKPSRPFRIATCGEDF-------------------LVNFYEGPPFKFKLSHR--GHS-------NFVNCVR 195 (609)
Q Consensus 147 ---~v~~~~~~p~~~~~i~t~~~d~-------------------~i~~~~~~~~~~~~~~~--~h~-------~~v~~l~ 195 (609)
.....+++|.+.. +..+..++ .+.-+|..+++..-.+. .|. .+.....
T Consensus 228 gg~~w~~~a~d~~~~~-vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d 306 (668)
T 1kv9_A 228 GGTVWDSMAYDPELDL-LYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAE 306 (668)
T ss_dssp ECCCCSCEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEE
T ss_pred CCccccceEEcCCCCE-EEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEE
Confidence 0113678887765 44554443 37788888887665443 232 2222223
Q ss_pred EcCCCC---EEEEEeCCCcEEEEeCCCCcccc
Q 007283 196 FSPDGS---KFISVSSDKKGIIYDGKTADKIG 224 (609)
Q Consensus 196 ~s~dg~---~l~s~~~d~~i~iwd~~~~~~~~ 224 (609)
+..+|+ .++.++.+|.++++|..+++.+.
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 334665 58888999999999999998763
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=0.012 Score=59.03 Aligned_cols=152 Identities=10% Similarity=0.099 Sum_probs=83.8
Q ss_pred ceeEEeecCC-CCeEEEe-CCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeC-CCc---EEEEcCCCCce
Q 007283 18 RGILISGHPK-SNSILYT-NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADV-SGT---VRIWGAHNDHV 91 (609)
Q Consensus 18 ~~~~~~~~~~-~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~-d~~---i~vWd~~~~~~ 91 (609)
+|..++++|+ +..|+.. .+..|..+|+.++.... +.........++|+|+|++|..++. ++. ..+|....+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 5668888983 4444433 33788889987765543 3333445789999999996655443 221 23332222222
Q ss_pred e-eEEEeecccceeEEEECC-CCCEEEEEECCCCcceEEEEEcCCCCeeEEEe-cCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 92 L-KKEFRVLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD-GHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 92 ~-~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
. ...+.. ......++++| +|..+++ ..+.. .+..++.+......... +....-..++|+|++..++++-...+
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~-d~~~~--~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFN-SWNAG--QVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEE-ETTTT--EEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEE-ECCCC--EEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 1 122222 23467889999 5654444 32222 23333433332211111 11234578999999986566666677
Q ss_pred eEEEEe
Q 007283 169 LVNFYE 174 (609)
Q Consensus 169 ~i~~~~ 174 (609)
.|..++
T Consensus 293 ~I~~~~ 298 (430)
T 3tc9_A 293 YILRSD 298 (430)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 777765
No 271
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.73 E-value=0.11 Score=58.78 Aligned_cols=526 Identities=13% Similarity=0.102 Sum_probs=249.7
Q ss_pred cCCCCeEEEeCCCEEEEEeCCCCccccc--cccCCCCcEEEE-ECCCC---CEEEEEeCCCcEEE--EcCCCCce-ee-E
Q 007283 25 HPKSNSILYTNGRSVIILDLSNPLQVSI--YGEHAYPATVAR-FSPNG---EWIASADVSGTVRI--WGAHNDHV-LK-K 94 (609)
Q Consensus 25 ~~~~~~l~~~~~~~~~i~~~~~~~~~~~--~~~h~~~v~~~~-~sp~g---~~las~~~d~~i~v--Wd~~~~~~-~~-~ 94 (609)
+|+.+.|+...++.+-||.......... +.- -+.|.+++ |.|.| .+|+-++.++.+-+ ||....+. +. .
T Consensus 43 ~~~~~~Lvvak~~~Lel~~~~~~~L~~v~~~~l-~G~I~~l~~~r~~g~~~D~L~v~td~~~~~il~~d~~~~~~~~~t~ 121 (1158)
T 3ei3_A 43 SAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGM-YGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITR 121 (1158)
T ss_dssp CSSCCEEEEEETTEEEEEEEETTEEEEEEEEEC-SSCEEEEEEECCTTCSSCEEEEEETTCEEEEEEEEC-CCCCEEEEE
T ss_pred CCCccEEEEecCCEEEEEEEcccceEEEEEEEc-ccEEEEEEEEcCCCCCceEEEEEeCCceEEEEEEcCCCCceeEEEE
Confidence 4667778888889999999865443221 111 24677765 66654 68888888887766 55443221 11 1
Q ss_pred EEeeccc-------ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCC-Ce--eEEEecCCccEEEEEEee--CCCeEEE
Q 007283 95 EFRVLSG-------RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSG-TN--VGEFDGHSRRVLSCAFKP--SRPFRIA 162 (609)
Q Consensus 95 ~~~~~~~-------~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~h~~~v~~~~~~p--~~~~~i~ 162 (609)
.+..... +-.-++..|.|+.++...-.+ ...++.++.. .. ...+.-....|.+++|-. .++ .||
T Consensus 122 ~~~~~~~~~~r~~~~g~~l~vDP~gR~~~l~~~e~---~~~v~pl~~~~~~l~~~~~~l~~~~v~d~~fL~g~~~P-~~A 197 (1158)
T 3ei3_A 122 AHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDG---LFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAP-TIC 197 (1158)
T ss_dssp EEEECCCSSCCBCTTCCEEEECTTSSEEEEECBTT---EEEEEECCTTCTTCCCEEEECSCCCEEEEEECSSCSSC-EEE
T ss_pred eccccccCccccCCCCCEEEEcCCCCEEEEEeccC---EEEEEEecCCcccccccccccccceEEEEEEecCCCCc-EEE
Confidence 1111111 123678889887666543222 3345555431 11 112222234577777732 223 344
Q ss_pred EecCC---CeEEEEeCCCCc-eeee--cc--CcccceEEEEEcC--CCCEEEEEeCCCcEEEEeCCCCccccccCcCCCC
Q 007283 163 TCGED---FLVNFYEGPPFK-FKLS--HR--GHSNFVNCVRFSP--DGSKFISVSSDKKGIIYDGKTADKIGELSPEDGH 232 (609)
Q Consensus 163 t~~~d---~~i~~~~~~~~~-~~~~--~~--~h~~~v~~l~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h 232 (609)
.=..| ..+.+|...... .... .. .-....+.+-=-| -|..|+. +.+. |...|......+. . +.. .
T Consensus 198 ~Ly~d~~~~~l~~y~ldl~~~~~~~~~w~~~~l~~~a~~LipVP~~~gGvlv~-g~n~-i~y~~~~~~~~~~-~-p~~-~ 272 (1158)
T 3ei3_A 198 FVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIII-GQES-ITYHNGDKYLAIA-P-PII-K 272 (1158)
T ss_dssp EEEEETTEEEEEEEEEETTTTEEEECSSCCEEECTTCCEEEECCTTTCCEEEE-CSSC-EEEEETTEEEEEC-C-GGG-G
T ss_pred EEEECCCCCEEEEEEEEcCCCeeeecccccccCCCCCCEEEECCCCCceEEEE-ECCE-EEEEcCCCceEEe-c-ccc-C
Confidence 32222 234445322211 1111 00 0000111111112 2444443 3333 3333422211111 1 111 1
Q ss_pred ccceEEEEE-CCCCCeEEEEeCCCcEEEeecccCCC--C-ceEEEeccCCCCCccceEEEEEEcCCeEEEEEcCCcEEEE
Q 007283 233 KGSVYAVSW-SPDGKQVLTASADKSAKVWDISEDNH--G-KLKKTLTPSGSGGVDDMLVGCLWQNDFLVIVSLGGTISIF 308 (609)
Q Consensus 233 ~~~V~~l~~-spd~~~l~s~s~d~~i~iwd~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 308 (609)
...+.+-+. ..++..++-+..+|.+..-.+..+.. + .....+....-+.......-+...++++++++..|.-.+|
T Consensus 273 ~~~i~~~~~~~~~~~~~LL~~~~G~l~~l~l~~d~~~~~~~~V~~l~i~~~~~~~~~ssl~~l~~g~lFvgS~~Gds~l~ 352 (1158)
T 3ei3_A 273 QSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLV 352 (1158)
T ss_dssp GSCEEEEEECSTTSSEEEEEETTCEEEEEEEEEEC-----CEEEEEEEEEEEECSCCSEEEECSTTEEEEECSSSCEEEE
T ss_pred CceEEEEEEEecCCCEEEEEeCCCCEEEEEEEEcCCccCceeEEEEEEEEcCCccCccEEEEECCCEEEEEEecCCcEEE
Confidence 123333333 33456667777899887665432111 1 0111111100000000011123356789999999988888
Q ss_pred eCCCCCC---C---ceeeeCCCCCeEEEEEecC----CCCEEEEEe--cCCcEEEEecCccccceeccc--cccceeEee
Q 007283 309 SANDLEK---S---PLQLSGHMKNVTALTVLNI----DPKVILSSS--YDGLIVKWIQGIGYGGKLQRK--ENSQIKCFA 374 (609)
Q Consensus 309 ~~~~~~~---~---~~~~~~h~~~v~~~~~~~~----~~~~~~t~s--~dg~i~~W~~~~~~~~~~~~~--~~~~~~~~~ 374 (609)
.+..... . ....-..-.+|..++..+. .++++++++ .+|.+++...+.+........ ....+..+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~ 432 (1158)
T 3ei3_A 353 KLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLR 432 (1158)
T ss_dssp EECSSCCTTSCCEEEEEEECCCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEECCCSCCEEEEEC
T ss_pred EEecCCCCccceEEeEeeecCcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeecCCCccEEEEEe
Confidence 7654321 1 1122234457777776642 234444433 578888875543322111111 111222222
Q ss_pred ee----CCcEEEEeccceEEEEeccCCccccccccccCCCCceeEeeccCCcEEEEEecccEEEeeCCe--eeEEec--c
Q 007283 375 AI----EEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAE--VVSTIN--L 446 (609)
Q Consensus 375 ~~----~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~ 446 (609)
.. ....+..++.+.-.++.+.+..........+......+....-..+.++.-+..+++++.... ...... .
T Consensus 433 ~~~~~~~~~yLvlS~~~~T~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~ 512 (1158)
T 3ei3_A 433 SDPNRETDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQ 512 (1158)
T ss_dssp CCSSCSSCCEEEEEETTEEEEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTT
T ss_pred ecCCCCCCCEEEEECCCCeEEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCC
Confidence 11 112333334444444544332211111111222223333332234566777778888776432 333333 2
Q ss_pred CCceeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCC------CCEEEEEeC-CCeEEEEE
Q 007283 447 RFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPD------VSMFASGDV-NREAIVWD 519 (609)
Q Consensus 447 ~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~------~~~l~s~s~-d~~v~iwd 519 (609)
+..+...+.+. ..++.++ .+.|.++++..+.+..... ..-...|.|+++.|. +.++|.|.+ |++++|++
T Consensus 513 ~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 513 AKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 34566666553 4566665 6789899987665543222 234568999999864 479999997 99999999
Q ss_pred ccCCceEEeeecCCCCceEEEEEC--CCCcEEEEEeCCCeEEEEEcC
Q 007283 520 RVSREVKLKNMLYHTARINCLAWS--PNNSMVATGSLDTCVIIYEID 564 (609)
Q Consensus 520 ~~~~~~~~~~~~~h~~~i~~l~~s--~d~~~l~s~s~D~~v~vw~~~ 564 (609)
+..-+........-.....++.+. ....+|..|-.||.+.-+.++
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 875443222211111222333222 234678899999998877765
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.72 E-value=0.037 Score=52.87 Aligned_cols=228 Identities=13% Similarity=-0.010 Sum_probs=127.1
Q ss_pred eEEEeCCCEEEEEeCCCCc-cccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEeecccceeEEE
Q 007283 30 SILYTNGRSVIILDLSNPL-QVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQ 107 (609)
Q Consensus 30 ~l~~~~~~~~~i~~~~~~~-~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~ 107 (609)
.|++.+...|...++.... ....+-..-.....++|++.+..|. +-...+.|+.++..........+...-.....++
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gla 85 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 85 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEE
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEE
Confidence 5777778888899987653 1111111123567889998655554 5446788999988765321112222234567899
Q ss_pred ECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeeeccC
Q 007283 108 WSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLSHRG 186 (609)
Q Consensus 108 ~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~~~~ 186 (609)
+.+.+..|..+.... ..+.+...+.......+.........++++|.+..++.+- +....|...+..-.........
T Consensus 86 vd~~~g~ly~~d~~~--~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 86 CDWLGEKLYWTDSET--NRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEcCCCeEEEEECCC--CEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 998766666554332 2344445443322222234445678899999766545554 3346666665432111111122
Q ss_pred cccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 187 HSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 187 h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
....-+.|+++|++..|..+. ..+.|..++...... ..+.. +.-..-..+++.. +.++.+-...+.|..++..
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~--~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVK--GSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC--SCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEec--CCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 234467899999777665554 467788888754322 22211 1122345566643 3445555566778888764
No 273
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.68 E-value=0.006 Score=59.43 Aligned_cols=227 Identities=13% Similarity=0.063 Sum_probs=115.1
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCcccc-----ccccCCCCcEEEEECCC----CCEEEEEeCC-----CcEEE
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVS-----IYGEHAYPATVARFSPN----GEWIASADVS-----GTVRI 83 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~-----~~~~h~~~v~~~~~sp~----g~~las~~~d-----~~i~v 83 (609)
.|..+.+.|+|..++.-..+.|.+++ ++.... .+..-......++|+|+ |.+.++-... ..|..
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 57789999999977776667888887 333211 11111345788999998 4444443322 55666
Q ss_pred EcCCCCc-----eeeEEEee---cccceeEEEECCCCCEEEEEECCCCc--------ceEEEEEcCCCC-----------
Q 007283 84 WGAHNDH-----VLKKEFRV---LSGRIDDLQWSPDGLRIVACGDGKGK--------SLVRAFMWDSGT----------- 136 (609)
Q Consensus 84 Wd~~~~~-----~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~~~~~--------~~~~~~~~~~~~----------- 136 (609)
++...+. .+...+.. .......++|.|||..+++.|+.... ...+++..+...
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 7665432 11111221 11234689999999888877754221 011232222211
Q ss_pred ---eeEEE-ecCCccEEEEEEee-CCCeEEEEecCCC-------eEEEEeCCC--------C--------ceeeeccCcc
Q 007283 137 ---NVGEF-DGHSRRVLSCAFKP-SRPFRIATCGEDF-------LVNFYEGPP--------F--------KFKLSHRGHS 188 (609)
Q Consensus 137 ---~~~~~-~~h~~~v~~~~~~p-~~~~~i~t~~~d~-------~i~~~~~~~--------~--------~~~~~~~~h~ 188 (609)
....+ .++ .....++|+| ++...++-.+.+. .+..-.... + .....+ .+.
T Consensus 190 ~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~ 267 (352)
T 2ism_A 190 RGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG 267 (352)
T ss_dssp TTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred CCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence 11111 122 2356788999 5654444444443 233322100 0 001112 122
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc------ccccCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 189 NFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK------IGELSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 189 ~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~------~~~~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
.....++| .+|.++++.-..+.|...+...... ...+. .-...+..+++.|||.++++..
T Consensus 268 ~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 268 FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---ccCCCeeEEEECCCCcEEEEEe
Confidence 23456777 4666655555556666665443321 11110 1124688899999997666653
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.68 E-value=0.046 Score=53.05 Aligned_cols=227 Identities=9% Similarity=-0.066 Sum_probs=130.1
Q ss_pred CCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEE-eCCCcEEEEcCCCCceeeEEEeecccceeEE
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASA-DVSGTVRIWGAHNDHVLKKEFRVLSGRIDDL 106 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~-~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~ 106 (609)
...|++.+...|...++..........+ -.....++|+|.+..|.-+ ...+.|+.++....... ............+
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-~~~~~~~~~p~gl 121 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-EVVSTGLESPGGL 121 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSCCCEE
T ss_pred CceeEeecccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-EEEeCCCCCccEE
Confidence 3467777777788888866544333333 2357899999866666544 46788988988765421 1122222346789
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCC-CeEEEEeCCCCceeeecc
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGED-FLVNFYEGPPFKFKLSHR 185 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d-~~i~~~~~~~~~~~~~~~ 185 (609)
++.+.+..|..+..+.. .+.....+.......+.........++++|.+..++.+-... +.|...+...........
T Consensus 122 avd~~~g~ly~~d~~~~--~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 199 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTS--RIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 199 (349)
T ss_dssp EEETTTTEEEEEETTTT--EEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC
T ss_pred EEecCCCeEEEEcCCCC--eEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 99987767666543322 344445443322222333445678899999777656655444 667666644222211122
Q ss_pred CcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 186 GHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
......+.++|+|++..|..+. ..+.|..++.........+. ..-..-..+++ ..+.++.+-...+.|..++.
T Consensus 200 ~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~giav-~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 200 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS---QGLPHPFAITV-FEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---SSCSSEEEEEE-ETTEEEEEETTTTEEEEEET
T ss_pred CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEe---CCCCCceEEEE-ECCEEEEecCCCCeEEEEEc
Confidence 2334568899998776655554 45678888865433221111 11223456666 34455555556677777763
No 275
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.65 E-value=0.039 Score=57.51 Aligned_cols=238 Identities=11% Similarity=0.024 Sum_probs=131.3
Q ss_pred CCeEEEeCCCEEEEEeCCCCccccccc--cCC--CCcE-EEEECCCCCEEEEEeC-----CCcEEEEcCCCCceeeEEEe
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYG--EHA--YPAT-VARFSPNGEWIASADV-----SGTVRIWGAHNDHVLKKEFR 97 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~--~h~--~~v~-~~~~sp~g~~las~~~-----d~~i~vWd~~~~~~~~~~~~ 97 (609)
+..++...+..++.+|..+++++-.+. .+. ..+. ...+. +|.+++.... ++.|..+|..+++.+- .+.
T Consensus 116 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W-~~~ 193 (571)
T 2ad6_A 116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKW-RAF 193 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEE-EEE
T ss_pred CEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEE-EEc
Confidence 333333345788889998887654332 211 0121 11111 5655554432 7899999999887543 222
Q ss_pred ecccc--------------------------------------eeEEEECCCCCEEEE-EECCC---------Cc---ce
Q 007283 98 VLSGR--------------------------------------IDDLQWSPDGLRIVA-CGDGK---------GK---SL 126 (609)
Q Consensus 98 ~~~~~--------------------------------------v~~~~~spdg~~l~~-~~~~~---------~~---~~ 126 (609)
..... -..+++.|+...+.. .++.. +. ..
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 21100 023566665444443 32210 00 12
Q ss_pred EEEEEcCCCCeeEEEec--C--------CccEEEEEEeeCCC--eEEEEecCCCeEEEEeCCCCceeeecc-Cc------
Q 007283 127 VRAFMWDSGTNVGEFDG--H--------SRRVLSCAFKPSRP--FRIATCGEDFLVNFYEGPPFKFKLSHR-GH------ 187 (609)
Q Consensus 127 ~~~~~~~~~~~~~~~~~--h--------~~~v~~~~~~p~~~--~~i~t~~~d~~i~~~~~~~~~~~~~~~-~h------ 187 (609)
+..++-++++.+..+.. | ..++. ....+++. ..++.++.++.+...|..+++...... +.
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 45566677777766642 2 12222 23334564 346778889999999987776543321 11
Q ss_pred ------ccce--------------------------EEEEEcCCCCEEEEEe----------------------------
Q 007283 188 ------SNFV--------------------------NCVRFSPDGSKFISVS---------------------------- 207 (609)
Q Consensus 188 ------~~~v--------------------------~~l~~s~dg~~l~s~~---------------------------- 207 (609)
..++ ..++|+|+..++....
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 0111 2457888877665543
Q ss_pred ---------CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 208 ---------SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 208 ---------~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
.++.+..||..+++.+.+... ...+.+..+...+.+++.++.|+.++.+|.. .++.+-.+.
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~---tG~~lw~~~ 502 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWE----KFAAWGGTLYTKGGLVWYATLDGYLKALDNK---DGKELWNFK 502 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEE----SSCCCSBCEEETTTEEEEECTTSEEEEEETT---TCCEEEEEE
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecC----CCCccceeEEECCCEEEEEcCCCeEEEEECC---CCCEEEEEe
Confidence 346888999988887665531 1122222223345677778999999999986 466665554
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.63 E-value=0.037 Score=50.51 Aligned_cols=200 Identities=8% Similarity=0.070 Sum_probs=115.4
Q ss_pred cCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEee-cccceeEEEECCCCCEEEEEECCCCcceEEEEEc
Q 007283 55 EHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRV-LSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMW 132 (609)
Q Consensus 55 ~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 132 (609)
|=.++++.++++|++..|. ..+.++.|..-|.. ++++.+ +.. -......+++.+++.++++ .++.. .+.++..
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~-i~l~g~~D~EGIa~~~~g~~~vs-~E~~~--~l~~~~v 98 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRT-IPLDFVKDLETIEYIGDNQFVIS-DERDY--AIYVISL 98 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEE-EECSSCSSEEEEEECSTTEEEEE-ETTTT--EEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEE-EecCCCCChHHeEEeCCCEEEEE-ECCCC--cEEEEEc
Confidence 4345799999999876555 46667777777776 554433 321 1246788899999865454 33332 2334444
Q ss_pred CCCCe---eEEEe------cCCccEEEEEEeeCCCeEEEEecCCC-eEEEEeCCCC--ceeee----c--cCcccceEEE
Q 007283 133 DSGTN---VGEFD------GHSRRVLSCAFKPSRPFRIATCGEDF-LVNFYEGPPF--KFKLS----H--RGHSNFVNCV 194 (609)
Q Consensus 133 ~~~~~---~~~~~------~h~~~v~~~~~~p~~~~~i~t~~~d~-~i~~~~~~~~--~~~~~----~--~~h~~~v~~l 194 (609)
+.... +.... ........++++|.+..++++...+. .+.-|+.... ..... + ..+...+..+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 43321 12221 12345689999999876566665554 5555552111 11111 0 1234467899
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEeCCCCccccccCcCCCCc------cceEEEEECCCCCeEEEEeCCCcEEEee
Q 007283 195 RFSPDGS-KFISVSSDKKGIIYDGKTADKIGELSPEDGHK------GSVYAVSWSPDGKQVLTASADKSAKVWD 261 (609)
Q Consensus 195 ~~s~dg~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~------~~V~~l~~spd~~~l~s~s~d~~i~iwd 261 (609)
+|+|... +++.......+.++|.. ++.+..+....+.. ..-..|+|.|+|++.++ +..+.++.+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 9999855 44555556677888855 44444333222221 24578999999985555 6666555553
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.62 E-value=0.025 Score=53.75 Aligned_cols=196 Identities=8% Similarity=-0.015 Sum_probs=108.6
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV 138 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (609)
....++++|+|+++++-..++.|..||.... .. ..+ ...+....++++|||+.+++........ +..++...++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~-~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~-v~~~d~~~g~~~ 108 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQ-IHA-TVEGKVSGLAFTSNGDLVATGWNADSIP-VVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EE-EEE-ECSSEEEEEEECTTSCEEEEEECTTSCE-EEEEECTTSCEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eE-EEE-eCCCCceeEEEcCCCcEEEEeccCCcce-EEEEcCCCCeEE
Confidence 4678999999998777767899999987653 22 112 2345688999999998666543222111 222233344322
Q ss_pred EEEe-cCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee----------eccCcccceEEEEEcCCCCEEEEE-
Q 007283 139 GEFD-GHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL----------SHRGHSNFVNCVRFSPDGSKFISV- 206 (609)
Q Consensus 139 ~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~----------~~~~h~~~v~~l~~s~dg~~l~s~- 206 (609)
.... ........++..+++ ..+++-..++.+..+|....+... ...+.....+.+ +||++.|..+
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 1111 112223344444433 345555556777777765432111 001112234455 8888755444
Q ss_pred eCCCcEEEEeCCC-CccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 207 SSDKKGIIYDGKT-ADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 207 ~~d~~i~iwd~~~-~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
...+.|..++... ++. ...... .....-..+++.++|+++++....+.|..++..
T Consensus 186 ~~~~~I~~~~~~~~g~~-~~~~~~-~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKP-GEPEIF-VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTTTEEEEEEBCTTSCB-CCCEEE-EESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCCCEEEEEEeCCCCCC-CccEEE-eccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 4567899998764 221 100000 000123468888999877777667888888753
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.62 E-value=0.051 Score=51.88 Aligned_cols=201 Identities=9% Similarity=-0.035 Sum_probs=113.5
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCC----CccccccccCCCCcEEEEECCCCCEE-EEEeCCCcEEEEcCCCC
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSN----PLQVSIYGEHAYPATVARFSPNGEWI-ASADVSGTVRIWGAHND 89 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~----~~~~~~~~~h~~~v~~~~~sp~g~~l-as~~~d~~i~vWd~~~~ 89 (609)
.+|..+.++++++.|++.. .+.|..+++.+ ......+...-.....+++.+.+..| ++-...+.|.+.+.+..
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 4677899999887787764 47888888865 22222232222346789999755544 55556789999988654
Q ss_pred ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 90 HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
. ........-.....+++.|++.+|..+..+.. ..+.....+ +.....+ ...-.....++++|++..++.+-...+
T Consensus 110 ~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~-~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 110 K-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp S-EEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred c-eEEEEECCCCCcceEEeCCCCCEEEEEccCCC-CeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 3 22222222346789999997777766543321 122222333 3333333 223345778999998776566666667
Q ss_pred eEEEEeCCCCce--eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 007283 169 LVNFYEGPPFKF--KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTAD 221 (609)
Q Consensus 169 ~i~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~ 221 (609)
.|..++...... .....+.......+++. ++..+++-...+.|..++..+++
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCc
Confidence 888887643211 11111122334556663 34444554455667666655544
No 279
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.61 E-value=0.0085 Score=63.96 Aligned_cols=237 Identities=11% Similarity=0.070 Sum_probs=133.1
Q ss_pred EEEeCCCEEEEEeCCCCccccccccC-CCCcEEEEECC---CCCEEEEEe-----CCCcEEEEcCCCCceeeEEEeecc-
Q 007283 31 ILYTNGRSVIILDLSNPLQVSIYGEH-AYPATVARFSP---NGEWIASAD-----VSGTVRIWGAHNDHVLKKEFRVLS- 100 (609)
Q Consensus 31 l~~~~~~~~~i~~~~~~~~~~~~~~h-~~~v~~~~~sp---~g~~las~~-----~d~~i~vWd~~~~~~~~~~~~~~~- 100 (609)
++...++.++.+|..+++++-.+... ......+..+| +|.+++..+ .++.|..+|..+++.+- .+....
T Consensus 121 ~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W-~~~~~~~ 199 (668)
T 1kv9_A 121 YVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAW-RFYTVPG 199 (668)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEE-EEESSCC
T ss_pred EEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEE-EecccCC
Confidence 33344678888999888875443321 10001111122 555554332 25899999999987543 332110
Q ss_pred c------------------------------ceeEEEECCCCCEEEEEECCCC----------------cceEEEEEcCC
Q 007283 101 G------------------------------RIDDLQWSPDGLRIVACGDGKG----------------KSLVRAFMWDS 134 (609)
Q Consensus 101 ~------------------------------~v~~~~~spdg~~l~~~~~~~~----------------~~~~~~~~~~~ 134 (609)
. ....+++.|++..+.....+.. ...+..++.++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t 279 (668)
T 1kv9_A 200 DPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT 279 (668)
T ss_dssp CTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred CCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC
Confidence 0 0124688887665554322110 01245556667
Q ss_pred CCeeEEEec--CC-------ccEEEEEEeeCCC--eEEEEecCCCeEEEEeCCCCceeeeccCcc------------cc-
Q 007283 135 GTNVGEFDG--HS-------RRVLSCAFKPSRP--FRIATCGEDFLVNFYEGPPFKFKLSHRGHS------------NF- 190 (609)
Q Consensus 135 ~~~~~~~~~--h~-------~~v~~~~~~p~~~--~~i~t~~~d~~i~~~~~~~~~~~~~~~~h~------------~~- 190 (609)
++.+..+.. |. .+.....+..++. ..++.++.++.+.++|..+++......-.. .+
T Consensus 280 G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~ 359 (668)
T 1kv9_A 280 GKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPV 359 (668)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEE
T ss_pred CceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCcc
Confidence 777776653 22 2333333444554 248888999999999988877652211000 00
Q ss_pred -----------------------eEEEEEcCCCCEEEEEe------------------------------------CCCc
Q 007283 191 -----------------------VNCVRFSPDGSKFISVS------------------------------------SDKK 211 (609)
Q Consensus 191 -----------------------v~~l~~s~dg~~l~s~~------------------------------------~d~~ 211 (609)
-..++|+|+...+.... .++.
T Consensus 360 ~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~ 439 (668)
T 1kv9_A 360 EAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGA 439 (668)
T ss_dssp ECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEE
T ss_pred ccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccce
Confidence 01267788766544311 2377
Q ss_pred EEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 212 GIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 212 i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
+..||..+++.+..... ...+....+...+.+++.++.|+.++.||.. .++.+..+.
T Consensus 440 l~A~D~~tG~~~W~~~~----~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~---tG~~l~~~~ 496 (668)
T 1kv9_A 440 LLAWDPVKQKAAWKVPY----PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD---KGEALWQFE 496 (668)
T ss_dssp EEEEETTTTEEEEEEEE----SSSCCCCEEEETTTEEEEECTTSEEEEEETT---TCCEEEEEE
T ss_pred EEEEeCCCCcEEEEccC----CCCCcCceeEeCCCEEEEECCcccchhhhhh---cChhheEec
Confidence 88999999987665532 1122333444567788899999999999986 455555543
No 280
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.57 E-value=0.024 Score=55.07 Aligned_cols=229 Identities=12% Similarity=0.033 Sum_probs=118.6
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCc-cccc---cccCCCCcEEEEECCC----CCEEEEEeC---C----CcEE
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPL-QVSI---YGEHAYPATVARFSPN----GEWIASADV---S----GTVR 82 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~-~~~~---~~~h~~~v~~~~~sp~----g~~las~~~---d----~~i~ 82 (609)
.|..+.+.|+|..++.-..+.|.+++. ++. .+.. +..-......++|+|+ |.+.++-.. + ..|.
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 567889999998777766678888873 333 1111 1111245788999997 555454332 3 4566
Q ss_pred EEcCCCC--c-----eeeEEEee-cccceeEEEECCCCCEEEEEECCCCc--------ceEEEEEcCC-CC--------e
Q 007283 83 IWGAHND--H-----VLKKEFRV-LSGRIDDLQWSPDGLRIVACGDGKGK--------SLVRAFMWDS-GT--------N 137 (609)
Q Consensus 83 vWd~~~~--~-----~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~--------~~~~~~~~~~-~~--------~ 137 (609)
.|+.... . .+...+.. .......++|.|||..+++.|+.... ...+++..+. ++ .
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 6665543 1 11111221 11234679999999988887753211 0012222222 11 0
Q ss_pred eEEE-ecCCccEEEEEEee-CCCeEEEEecCCC--eEEEEeCCCCc------------------eeeeccCcccceEEEE
Q 007283 138 VGEF-DGHSRRVLSCAFKP-SRPFRIATCGEDF--LVNFYEGPPFK------------------FKLSHRGHSNFVNCVR 195 (609)
Q Consensus 138 ~~~~-~~h~~~v~~~~~~p-~~~~~i~t~~~d~--~i~~~~~~~~~------------------~~~~~~~h~~~v~~l~ 195 (609)
...+ .++. ....++|+| ++...++-.+.+. .+.+-. .+. ....+.........+.
T Consensus 189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~ 265 (354)
T 3a9g_A 189 SPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGAS 265 (354)
T ss_dssp CCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEE
T ss_pred CcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceE
Confidence 1111 2332 245789999 5654333334332 222221 111 1111211123467788
Q ss_pred Ec-------CCCCEEEEEeCCCcEEEEeCCCCccc---cccCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 196 FS-------PDGSKFISVSSDKKGIIYDGKTADKI---GELSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 196 ~s-------~dg~~l~s~~~d~~i~iwd~~~~~~~---~~~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
|. .+|.++++.-..+.|...+......+ ..+ ..+-...+..+++.|||.+.++..
T Consensus 266 ~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~--~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 266 FVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF--FKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp ECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE--CTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee--ccCCCCCeeEEEECCCCcEEEEEe
Confidence 83 46766665555667777766543211 111 112235688999999998766653
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.50 E-value=0.078 Score=55.39 Aligned_cols=188 Identities=11% Similarity=0.058 Sum_probs=101.7
Q ss_pred CCEEEEEeC-CCCccccccccCCCC-----------cEEEEECCCCCE----EEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 36 GRSVIILDL-SNPLQVSIYGEHAYP-----------ATVARFSPNGEW----IASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 36 ~~~~~i~~~-~~~~~~~~~~~h~~~-----------v~~~~~sp~g~~----las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
.+.++-+|. .+++++-.+...... ...++++|.+.. |..++.|+.+.-.|..+++.+-. ....
T Consensus 72 ~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~-~~~~ 150 (599)
T 1w6s_A 72 PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWK-VENS 150 (599)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEE-EECC
T ss_pred CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEe-ecCC
Confidence 456788888 777765433321110 123466554444 77778899999999988875432 2211
Q ss_pred c--c--cee-EEEECCCCCEEEEEECC--CCcceEEEEEcCCCCeeEEEecCCcc-------------------------
Q 007283 100 S--G--RID-DLQWSPDGLRIVACGDG--KGKSLVRAFMWDSGTNVGEFDGHSRR------------------------- 147 (609)
Q Consensus 100 ~--~--~v~-~~~~spdg~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~------------------------- 147 (609)
. . .+. ..... ++..++..+.+ .....++.++-.+++.+..+......
T Consensus 151 ~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~t 229 (599)
T 1w6s_A 151 DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGT 229 (599)
T ss_dssp CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHT
T ss_pred CCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccccccccc
Confidence 1 0 111 11111 45333322100 01234666777777777665432211
Q ss_pred ------------EE-EEEEeeCCCeEEEEecC---------------CCeEEEEeCCCCceeeecc--Ccc--------c
Q 007283 148 ------------VL-SCAFKPSRPFRIATCGE---------------DFLVNFYEGPPFKFKLSHR--GHS--------N 189 (609)
Q Consensus 148 ------------v~-~~~~~p~~~~~i~t~~~---------------d~~i~~~~~~~~~~~~~~~--~h~--------~ 189 (609)
+. ..++.|....+++..+. ...+.-+|..+++..-.+. .|. .
T Consensus 230 w~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~ 309 (599)
T 1w6s_A 230 WEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNV 309 (599)
T ss_dssp SSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCC
T ss_pred CCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCc
Confidence 11 34566666654443332 1367778888877654432 231 1
Q ss_pred ceEEEEEc-CCC---CEEEEEeCCCcEEEEeCCCCcccccc
Q 007283 190 FVNCVRFS-PDG---SKFISVSSDKKGIIYDGKTADKIGEL 226 (609)
Q Consensus 190 ~v~~l~~s-~dg---~~l~s~~~d~~i~iwd~~~~~~~~~~ 226 (609)
++. +... .+| ..++.++.+|.+.+.|.++++.+...
T Consensus 310 p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 310 MML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp CEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 221 2222 567 45777889999999999999876543
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.46 E-value=0.11 Score=51.53 Aligned_cols=205 Identities=8% Similarity=-0.066 Sum_probs=113.9
Q ss_pred cCceeEEeecCCCCeEEEeC--CCEEEEEeCCCC----ccccccccCCCCcEEEEECCCC-CEEEEEeCCCcEEEEcCCC
Q 007283 16 RGRGILISGHPKSNSILYTN--GRSVIILDLSNP----LQVSIYGEHAYPATVARFSPNG-EWIASADVSGTVRIWGAHN 88 (609)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~----~~~~~~~~h~~~v~~~~~sp~g-~~las~~~d~~i~vWd~~~ 88 (609)
-+.+..+++++.++.|++.. .+.|..+++... .........-.....+++.+.+ ++..+-...+.|.+.+.+.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 34677899998877777763 467888887652 2222233233457889999854 4445555678899888875
Q ss_pred CceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 89 DHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
... ...+...-.....+++.|.+.+|..+..+.. ..+.....+...........-.....++++|++..++.+=...+
T Consensus 191 ~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 191 VKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp CSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSS-CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred Cce-EEEEeCCCCCcceEEEecccCeEEEEeCCCC-CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 432 2222223345789999997767666543321 12333333332222222333356788999988776555555667
Q ss_pred eEEEEeCCCCce--eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccc
Q 007283 169 LVNFYEGPPFKF--KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKI 223 (609)
Q Consensus 169 ~i~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~ 223 (609)
.|...+...... .....+.......+++. .+..+++-...+.|..++..+++.+
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence 787777543222 11111222333455552 2334455555566666665555443
No 283
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.42 E-value=0.077 Score=51.51 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=59.6
Q ss_pred ceeEEeecCCCC-eEEEeCCCEEEEEeCCCCcc--cc----ccccCCCCcEEEEECCC----CCEEEEEeC---C----C
Q 007283 18 RGILISGHPKSN-SILYTNGRSVIILDLSNPLQ--VS----IYGEHAYPATVARFSPN----GEWIASADV---S----G 79 (609)
Q Consensus 18 ~~~~~~~~~~~~-~l~~~~~~~~~i~~~~~~~~--~~----~~~~h~~~v~~~~~sp~----g~~las~~~---d----~ 79 (609)
.|..+.+.|+|. .++.-..+.|.+++...... +. .+....+....++|+|+ |.+.++-.. + .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 577999999999 77776667888887532211 11 11112345688999995 554444222 1 2
Q ss_pred cEEEEcCCCC--ce--eeEEEeecc------cceeEEEECCCCCEEEEEECC
Q 007283 80 TVRIWGAHND--HV--LKKEFRVLS------GRIDDLQWSPDGLRIVACGDG 121 (609)
Q Consensus 80 ~i~vWd~~~~--~~--~~~~~~~~~------~~v~~~~~spdg~~l~~~~~~ 121 (609)
.|..++.... .. ....+.... ..-..++|.|||..+++.|+.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~ 150 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGEN 150 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCC
Confidence 3444554322 11 111122211 224679999999888888764
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.35 E-value=0.23 Score=53.70 Aligned_cols=229 Identities=10% Similarity=-0.051 Sum_probs=127.1
Q ss_pred CeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCce---eeEEEeeccccee
Q 007283 29 NSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHV---LKKEFRVLSGRID 104 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~---~~~~~~~~~~~v~ 104 (609)
..|++.+...|+..++..........+ ...+..++|++.+..|. +-...+.|+.+++..... ....+........
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp CEEEEECBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccccccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 456777777888888866554333333 45678999998655554 544567888888764211 1112222334567
Q ss_pred EEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeee
Q 007283 105 DLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLS 183 (609)
Q Consensus 105 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~ 183 (609)
.|++.+.+..|..+..+. ..|.+...+.......+.........|+++|.+..++.+- +....|...+..-......
T Consensus 475 GLAvD~~~~~LY~tD~~~--~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp EEEEETTTTEEEEEETTT--TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred eeeeeecCCcEEEEecCC--CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 899999887777665333 2455555553332222334445678999999866555543 3335676666543222222
Q ss_pred ccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 184 HRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
........+.|++.+.+..|..+. ....|...+.........+. ..+.-..-.+|++.. ++++++-...+.|...+.
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~-~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE-CTTTTSSEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEec-CCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeC
Confidence 333345678899998776666554 45678788765433221111 101111234555532 234444445566666664
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.35 E-value=0.14 Score=50.61 Aligned_cols=229 Identities=10% Similarity=-0.026 Sum_probs=129.2
Q ss_pred CeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe-CCCcEEEEcCCCCc---eeeEEEeeccccee
Q 007283 29 NSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD-VSGTVRIWGAHNDH---VLKKEFRVLSGRID 104 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~-~d~~i~vWd~~~~~---~~~~~~~~~~~~v~ 104 (609)
..|++.+...|...++.......... .-..+..++|++.+..|.-++ ..+.|+.++..... ..............
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred ceeEEeccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 46777788899999987665433332 345688999998766665444 56788888876421 11112222334577
Q ss_pred EEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeee
Q 007283 105 DLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLS 183 (609)
Q Consensus 105 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~ 183 (609)
.+++.+.+..|..+..... .+.+...+.......+.........++++|.+..++.+- +....|...+..-......
T Consensus 163 glavD~~~~~lY~~d~~~~--~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLG--TVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp EEEEETTTTEEEEEETTTT--EEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred cEEEEecCCceEEEECCCC--eEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 8999986666666543322 344444443332223333445578899999766555554 3335666665442222222
Q ss_pred ccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 184 HRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
........+.|++++++..|..+. ....|..+|...... ..+....+.-..-.++++. .+.++.+-...+.|..++.
T Consensus 241 ~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 223335578899998877666654 456788888654332 2221111111223456662 3345555566677877774
No 286
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.35 E-value=0.12 Score=53.73 Aligned_cols=187 Identities=12% Similarity=0.054 Sum_probs=98.2
Q ss_pred CCEEEEEeC-CCCccccccccCCC-Cc----------EEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeeccc-c
Q 007283 36 GRSVIILDL-SNPLQVSIYGEHAY-PA----------TVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSG-R 102 (609)
Q Consensus 36 ~~~~~i~~~-~~~~~~~~~~~h~~-~v----------~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~-~ 102 (609)
.+.++-+|. .+++++-.+..... .+ ..+++ .+..|..++.|+.+..+|..+++.+-. +..... .
T Consensus 72 ~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~-~~~~~~~~ 148 (571)
T 2ad6_A 72 PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWE-VEVCDPKV 148 (571)
T ss_dssp TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE-EECCCGGG
T ss_pred CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEE-ecCCCCCc
Confidence 456888888 77776543321111 00 11222 345666777899999999988875432 221110 0
Q ss_pred eeEEEECC---CCCEEEEEECCC--CcceEEEEEcCCCCeeEEEecCCcc------------------------------
Q 007283 103 IDDLQWSP---DGLRIVACGDGK--GKSLVRAFMWDSGTNVGEFDGHSRR------------------------------ 147 (609)
Q Consensus 103 v~~~~~sp---dg~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~------------------------------ 147 (609)
-..+.-+| ++..++....+. ....+..++-++++.+..+......
T Consensus 149 ~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~ 228 (571)
T 2ad6_A 149 GSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDA 228 (571)
T ss_dssp TCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTG
T ss_pred cceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccc
Confidence 00111122 443333322100 0224566676777777665432111
Q ss_pred -------E-EEEEEeeCCCeEEEEecC-----------C----CeEEEEeCCCCceeeecc--Ccc--------cceEEE
Q 007283 148 -------V-LSCAFKPSRPFRIATCGE-----------D----FLVNFYEGPPFKFKLSHR--GHS--------NFVNCV 194 (609)
Q Consensus 148 -------v-~~~~~~p~~~~~i~t~~~-----------d----~~i~~~~~~~~~~~~~~~--~h~--------~~v~~l 194 (609)
+ ..+++.|....+++..+. | ..+..+|..+++..-.+. .|. .++. +
T Consensus 229 ~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~ 307 (571)
T 2ad6_A 229 WKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-T 307 (571)
T ss_dssp GGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-E
T ss_pred eecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-E
Confidence 0 135666765554443321 2 257778888877654432 221 2221 2
Q ss_pred EEcCCCC---EEEEEeCCCcEEEEeCCCCcccccc
Q 007283 195 RFSPDGS---KFISVSSDKKGIIYDGKTADKIGEL 226 (609)
Q Consensus 195 ~~s~dg~---~l~s~~~d~~i~iwd~~~~~~~~~~ 226 (609)
...++|+ .++.++.+|.+.++|..+++.+...
T Consensus 308 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 308 DQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 2234774 5677888999999999998876543
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.33 E-value=0.12 Score=49.27 Aligned_cols=202 Identities=6% Similarity=-0.084 Sum_probs=113.1
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCCccc-cccccCCCCcEEEEECCCCC-EEEEEeCCCcEEEEcCCCCcee
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNPLQV-SIYGEHAYPATVARFSPNGE-WIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~~~~-~~~~~h~~~v~~~~~sp~g~-~las~~~d~~i~vWd~~~~~~~ 92 (609)
+.++.+.++++++.|++.. .+.|..+++...... ..+...-.....+++.+.+. +..+-...+.|.+.+.+....
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~- 113 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR- 113 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-
Confidence 4567888998877777763 478888888665321 22222223467899998554 445555678899998865331
Q ss_pred eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeEE
Q 007283 93 KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLVN 171 (609)
Q Consensus 93 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~ 171 (609)
.............+++.|.+.+|..+..+... .+.....+. .....+ ...-..-..++++|++..++.+=...+.|.
T Consensus 114 ~~l~~~~~~~P~giavdp~~g~ly~td~~~~~-~I~r~~~dG-~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 114 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVP-KIERAGMDG-SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp EEEECSSCSSEEEEEEEGGGTEEEEEECSSSC-EEEEEETTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEeCCCCCccEEEEeCCCCEEEEEecCCCC-EEEEEEcCC-CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 11222233456889999976666655423211 222233332 222222 222345678999997776555556667788
Q ss_pred EEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc
Q 007283 172 FYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADK 222 (609)
Q Consensus 172 ~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~ 222 (609)
.++...........+.......+++.. +..+.+-...+.|..++..+++.
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 877543222111222233345556643 23444444556677776655543
No 288
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.32 E-value=0.22 Score=52.02 Aligned_cols=77 Identities=13% Similarity=0.071 Sum_probs=43.7
Q ss_pred CCCeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CC
Q 007283 511 VNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DE 589 (609)
Q Consensus 511 ~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~ 589 (609)
.++.+.-||+.+++...+.... .+...-...-.+.+++.++.|+.++.||..+++ .+.....+......-+.|. ++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~-~lW~~~l~~g~~~~P~~y~~~G 527 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD-LLWKFKIPSGAIGYPMTYTHKG 527 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC-EEEEEECSSCCCSCCEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCC-EEEEeeCCCCcEeccEEEEeCC
Confidence 3478888888877665432211 111111112256677789999999999998754 4444433322222335554 55
Q ss_pred C
Q 007283 590 H 590 (609)
Q Consensus 590 ~ 590 (609)
+
T Consensus 528 ~ 528 (599)
T 1w6s_A 528 T 528 (599)
T ss_dssp E
T ss_pred E
Confidence 5
No 289
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.31 E-value=0.013 Score=53.37 Aligned_cols=159 Identities=10% Similarity=-0.014 Sum_probs=101.9
Q ss_pred eeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceee
Q 007283 103 IDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKL 182 (609)
Q Consensus 103 v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~ 182 (609)
...+.|+. +..+++.|+.. .++.++.++++.+..+-.....-..+++ ++..++...-.++.+.++|..+++...
T Consensus 57 tqGL~~~~-~~Ly~stG~~g---~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQG---TLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEET-TEEEEEETTTT---EEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEEC-CEEEEEcCCCC---EEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 47888873 44444544322 2677777788776665211112233554 444556666778899999999988876
Q ss_pred eccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCc---cceEEEEECCCCCeEEEEeCCCcEEE
Q 007283 183 SHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHK---GSVYAVSWSPDGKQVLTASADKSAKV 259 (609)
Q Consensus 183 ~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~---~~V~~l~~spd~~~l~s~s~d~~i~i 259 (609)
++.--... ..+++|++.|+.+..++.+.++|..+.+.+.++... .+. ..++.+.|. +|+..+....+..|.+
T Consensus 131 ti~~~~eG---wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~-~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 131 TTRYSGEG---WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVK-LRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEECSSCC---CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECE-ETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EEeCCCce---eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeC-CCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 65422211 234467888877777889999999998877766432 122 245677776 7776766667788999
Q ss_pred eecccCCCCceEEEec
Q 007283 260 WDISEDNHGKLKKTLT 275 (609)
Q Consensus 260 wd~~~~~~~~~~~~~~ 275 (609)
.|.. .++....+.
T Consensus 206 IDp~---TG~V~~~Id 218 (268)
T 3nok_A 206 IDPA---TGTVVGVID 218 (268)
T ss_dssp ECTT---TCBEEEEEE
T ss_pred EeCC---CCcEEEEEE
Confidence 9876 455555543
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.29 E-value=0.13 Score=49.16 Aligned_cols=270 Identities=12% Similarity=0.075 Sum_probs=138.6
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccc----cCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceee
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYG----EHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~----~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~ 93 (609)
....|.+.+++..++......+ +.....++...... .....+..++|+| ++.++.+ .++.| +...++...-
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g-~~g~i--~~S~DgG~tW 111 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVG-EPPIM--LHTTDGGQSW 111 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEE-ETTEE--EEESSTTSSC
T ss_pred cEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEE-CCCeE--EEECCCCCCc
Confidence 4557777766666664443433 33443343322221 1234688999987 5555554 45544 3333221111
Q ss_pred EEEe---ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCee-EEEecCCccEEEEEEeeCCCeEEEEecCCCe
Q 007283 94 KEFR---VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV-GEFDGHSRRVLSCAFKPSRPFRIATCGEDFL 169 (609)
Q Consensus 94 ~~~~---~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~ 169 (609)
.... .+.+.+..+.+.+++..++ +++... + +...|.+..- ....++...+..+++.|++.. ++.+.....
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~g~--v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~-~~~g~~G~~ 185 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEM-ITNVGA--I--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEY-VAVSSRGSF 185 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEE-EETTCC--E--EEESSTTSSEEEEECSCCCCEEEEEECTTSCE-EEEETTSSE
T ss_pred eECccccCCCCCeEEEEEECCCCEEE-EeCCcc--E--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcE-EEEECCCcE
Confidence 1111 1234567788877775544 443221 2 2344544332 222345567889999998764 555555555
Q ss_pred EEEEe--CCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcC-CCCccceEEEEECCCCC
Q 007283 170 VNFYE--GPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPE-DGHKGSVYAVSWSPDGK 246 (609)
Q Consensus 170 i~~~~--~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~h~~~V~~l~~spd~~ 246 (609)
++-.| ..+++.. ..+....+..+.+++++..+ .++.+|.+++.+...++....+... ..+...+.++.+.|++.
T Consensus 186 ~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~ 262 (327)
T 2xbg_A 186 YSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE 262 (327)
T ss_dssp EEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred EEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence 55555 3444433 22345678899999998755 4566787777642223333322110 01223588999999887
Q ss_pred eEEEEeCCCcEEEeecccCCCCceEEEec-cC-CCCCccceEEEEEEcCCeEEEEEcCCcEEEEe
Q 007283 247 QVLTASADKSAKVWDISEDNHGKLKKTLT-PS-GSGGVDDMLVGCLWQNDFLVIVSLGGTISIFS 309 (609)
Q Consensus 247 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~ 309 (609)
.++.+. ++.+. +..+. ++.=..+. .. ....+.. +.+ .++..+++++.+|.+..++
T Consensus 263 ~~~~g~-~g~i~-~S~Dg---G~tW~~~~~~~~~~~~~~~--v~~-~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 263 VWLAGG-AGALL-CSQDG---GQTWQQDVDVKKVPSNFYK--ILF-FSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEEEES-TTCEE-EESST---TSSCEECGGGTTSSSCCCE--EEE-EETTEEEEECSTTEEEEEC
T ss_pred EEEEeC-CCeEE-EeCCC---CcccEEcCccCCCCCCeEE--EEE-ECCCceEEEcCCceEEEEc
Confidence 766654 67663 33221 21111111 00 0111111 111 2456677778888766554
No 291
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.24 E-value=0.11 Score=46.84 Aligned_cols=162 Identities=14% Similarity=0.101 Sum_probs=105.9
Q ss_pred ceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCc-cEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCce
Q 007283 102 RIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSR-RVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKF 180 (609)
Q Consensus 102 ~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~ 180 (609)
-...+.|++ +..+.+.|. .+.+.++..+.++++.+..+.-... .-..+++. +..++...-.++.+.++|..+++.
T Consensus 22 ftqGL~~~~-~~LyestG~-~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGE-TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CEEEEEEET-TEEEEEECC-TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccEEEEC-CEEEEECCC-CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE
Confidence 467899987 555555554 3345678889998888776653322 22334443 445566667788999999999887
Q ss_pred eeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCc---cceEEEEECCCCCeEEEEeCCCcE
Q 007283 181 KLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHK---GSVYAVSWSPDGKQVLTASADKSA 257 (609)
Q Consensus 181 ~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~---~~V~~l~~spd~~~l~s~s~d~~i 257 (609)
..++.-.... ..+++|+..|..+..++.+.++|..+.+.+.++.... +. ..++.+.+. +|+..+....+..|
T Consensus 98 ~~ti~~~~~G---wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 98 RARFRYPGEG---WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp EEEEECSSCC---CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred EEEEeCCCCc---eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCcccccceeeEEe-CCEEEEEECCCCeE
Confidence 7665432222 2344677777777678899999999988777664321 11 245666665 67766666667788
Q ss_pred EEeecccCCCCceEEEec
Q 007283 258 KVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 258 ~iwd~~~~~~~~~~~~~~ 275 (609)
.+.|.. .++....+.
T Consensus 173 ~vIDp~---tG~V~~~id 187 (243)
T 3mbr_X 173 ARIDPA---SGKVVAWID 187 (243)
T ss_dssp EEECTT---TCBEEEEEE
T ss_pred EEEECC---CCCEEEEEE
Confidence 888876 455555543
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.18 E-value=0.23 Score=49.62 Aligned_cols=199 Identities=11% Similarity=0.008 Sum_probs=108.3
Q ss_pred cEEEEECCC---CCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCC
Q 007283 60 ATVARFSPN---GEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGT 136 (609)
Q Consensus 60 v~~~~~sp~---g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 136 (609)
-..++++|+ |++.++- ..+.|+.+|..+++.. .+.........++|+|+|..+++-..+.......++.-..+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D-~~~~I~~id~~~g~v~--~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVG-QRDAFRHVDFVNQYVD--IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEEC-BTSCEEEEETTTTEEE--EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEe-CCCCEEEEECCCCEEE--EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 568899995 6655543 3388999998766532 222233458899999999944432211111111111111111
Q ss_pred ee--EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCceeee-c-cCcccceEEEEEcCCCCEEE-EEeCCCc
Q 007283 137 NV--GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKFKLS-H-RGHSNFVNCVRFSPDGSKFI-SVSSDKK 211 (609)
Q Consensus 137 ~~--~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~~~~-~-~~h~~~v~~l~~s~dg~~l~-s~~~d~~ 211 (609)
.. ..+. .......++++|++..++++-..++.|..++...+..... + .+....-..++|+|+|+.|. +-.....
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 10 1111 1233456788884334455555667788888765544111 1 11222234699999999544 4445678
Q ss_pred EEEEeCC--CCccc--cccC---cCCCC---------ccceEEEEE---------CCCCCeEEEEeCCCcEEEeec
Q 007283 212 GIIYDGK--TADKI--GELS---PEDGH---------KGSVYAVSW---------SPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 212 i~iwd~~--~~~~~--~~~~---~~~~h---------~~~V~~l~~---------spd~~~l~s~s~d~~i~iwd~ 262 (609)
|..++.. ++... ..+. ...+. -..-..+++ .++|.++++-...+.|+.++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 8887644 22210 0000 00011 112457888 777888878777888999875
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.17 E-value=0.19 Score=52.47 Aligned_cols=60 Identities=18% Similarity=0.121 Sum_probs=38.5
Q ss_pred CCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecccCCCCceEEEec
Q 007283 209 DKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDISEDNHGKLKKTLT 275 (609)
Q Consensus 209 d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~ 275 (609)
++.+..||..+++.+.+.... ..+..-.+...+.+++.++.|+.++.||.+ .++.+-.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~g~~dg~l~A~D~~---tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH----LPLWAGVLATAGNLVFTGTGDGYFKAFDAK---SGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES----SCCCSCCEEETTTEEEEECTTSEEEEEETT---TCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCC----CCCcccceEeCCCEEEEECCCCcEEEEECC---CCCEEEEec
Confidence 577888999998876554311 111111112246678889999999999986 466665554
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.28 Score=49.38 Aligned_cols=241 Identities=10% Similarity=0.019 Sum_probs=128.9
Q ss_pred ceeEEeecCC-CCeEEEe--CCCEEEEEeCCCCccccccccC---CCCcEEEEE-------CCCCCEEEEEeCCC-c---
Q 007283 18 RGILISGHPK-SNSILYT--NGRSVIILDLSNPLQVSIYGEH---AYPATVARF-------SPNGEWIASADVSG-T--- 80 (609)
Q Consensus 18 ~~~~~~~~~~-~~~l~~~--~~~~~~i~~~~~~~~~~~~~~h---~~~v~~~~~-------sp~g~~las~~~d~-~--- 80 (609)
.|.-++++|+ +..|+.+ ..+.+.+.|+.++........- -.....++| +++|++|..++..+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 5678899983 4434333 3468888998887665433321 124788999 99999665554433 2
Q ss_pred ---EEEEcCCC-Ccee----eEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcC-------CCCe--------
Q 007283 81 ---VRIWGAHN-DHVL----KKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWD-------SGTN-------- 137 (609)
Q Consensus 81 ---i~vWd~~~-~~~~----~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~-------~~~~-------- 137 (609)
|.+.+... +... ...+.... ....++++|++.+|..+.-..+ .+..++.+ .+..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g--~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKG--QVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTT--EEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCC--EEEEEecccccccccCceeeccccccc
Confidence 44554333 1211 01222222 3457889997666666554332 24444544 2221
Q ss_pred ---eEE-E-ecCCccEEEEEEeeCCCeEEEEecCCCeEEEE--eCCCCce-----eeec---cCc---------ccceE-
Q 007283 138 ---VGE-F-DGHSRRVLSCAFKPSRPFRIATCGEDFLVNFY--EGPPFKF-----KLSH---RGH---------SNFVN- 192 (609)
Q Consensus 138 ---~~~-~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~--~~~~~~~-----~~~~---~~h---------~~~v~- 192 (609)
... + .+....-..++|+|++..++++=...+.|+.+ +...... .... .|. ...-.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 111 1 12233457899999998545555666777764 4433221 1111 111 11223
Q ss_pred EEEEc-------CCCCEEEEEeCCCcEEEEeCCCCccccccCcC-----------CCC----------ccceEEEEECCC
Q 007283 193 CVRFS-------PDGSKFISVSSDKKGIIYDGKTADKIGELSPE-----------DGH----------KGSVYAVSWSPD 244 (609)
Q Consensus 193 ~l~~s-------~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----------~~h----------~~~V~~l~~spd 244 (609)
-+... ++|.++++=.....|+.++. ++. +.++.-. .+. -..-..|++.++
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 34443 45655555556678888873 332 2221000 010 122467888886
Q ss_pred -CCeEEEEeCCCcEEEeecc
Q 007283 245 -GKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 245 -~~~l~s~s~d~~i~iwd~~ 263 (609)
+.++++-+..+.||.+++.
T Consensus 455 ~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEECC
Confidence 7777777777888888775
No 295
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.03 E-value=0.43 Score=50.15 Aligned_cols=226 Identities=8% Similarity=-0.061 Sum_probs=130.1
Q ss_pred CeEEEeCCCEEEEEeCCCCccccccc-cCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCCceeeEEEeecccceeEE
Q 007283 29 NSILYTNGRSVIILDLSNPLQVSIYG-EHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDL 106 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~ 106 (609)
..|++.++..|...++.+......+. ..-.....++|++.+..|. +-..++.|+.++...... ...+.........+
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEGM 85 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEE
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcceE
Confidence 56778888899999997654322221 1234578999999766665 444678898888765432 22222222457789
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe-cCCCeEEEEeCCCCceeeecc
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC-GEDFLVNFYEGPPFKFKLSHR 185 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~-~~d~~i~~~~~~~~~~~~~~~ 185 (609)
++.+.+..|..+..+. ..+.+...+.......+...-.....++++|.+..++.+- +....|...+..-.... .+.
T Consensus 86 AvD~~~~~LY~tD~~~--~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~ 162 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGT--NRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLV 162 (628)
T ss_dssp EEETTTTEEEEEETTT--TEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE
T ss_pred EEEeCCCEEEEEECCC--CEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEE
Confidence 9988877777664333 2344444443322222223445578999998666545543 33455655554322221 111
Q ss_pred CcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 186 GHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
......+.|+++++++.|..+. ..+.|...+...... ..+.. .-..-.++++.. +.++.+-...+.|...|..
T Consensus 163 ~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 163 PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE---CCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec---cCCCceEEEEEC-CEEEEecCCCCEEEEEECC
Confidence 2345578899999877666554 456788888754332 22211 112234666654 4455555556777777753
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.97 E-value=0.035 Score=55.65 Aligned_cols=153 Identities=9% Similarity=0.082 Sum_probs=92.0
Q ss_pred eeEEEEcC-CCCEEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeC-C----CeEEEEEccCC
Q 007283 450 VTASAIAP-DGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDV-N----REAIVWDRVSR 523 (609)
Q Consensus 450 ~~~~~~sp-~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~-d----~~v~iwd~~~~ 523 (609)
...++++| ++..|.+....+.|+.++..++.+.. +.........|+|+++|.++..+.. + ..+...+....
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~---~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST---VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE---EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE---EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 46678898 45556666555888888887665432 2224456889999999995555543 2 23444443322
Q ss_pred ceEEeeecCCCCceEEEEECC-CCcEEEEEeCCCeEEEEEcCCCCCcceeEeccccCCeEEEEEc-CCC-eEEEEeCCCc
Q 007283 524 EVKLKNMLYHTARINCLAWSP-NNSMVATGSLDTCVIIYEIDKPASSRMTIKGAHLGGVYGLAFT-DEH-SVVSSGEDAC 600 (609)
Q Consensus 524 ~~~~~~~~~h~~~i~~l~~s~-d~~~l~s~s~D~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s-~~~-~l~s~s~D~~ 600 (609)
......+. .......++++| ++.++++-..++.|..++.+... .......+-...-..++|+ +++ .+++-...+.
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~-~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE-TTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE-EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc-EEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 11011111 123456789999 77777777778889999876432 1011111122345689999 667 5566667788
Q ss_pred EEEEEcc
Q 007283 601 VRVWRLT 607 (609)
Q Consensus 601 i~~W~~~ 607 (609)
|..++.+
T Consensus 294 I~~~~~d 300 (430)
T 3tc9_A 294 ILRSDYD 300 (430)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 8887654
No 297
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.96 E-value=0.29 Score=46.91 Aligned_cols=231 Identities=12% Similarity=0.090 Sum_probs=116.8
Q ss_pred ceeEEeecCCCCeEEEeC-CCEEEEEeCCCCcccc------ccccCCCCcEEEEECCC----CCEEEEE--eCCCcEEEE
Q 007283 18 RGILISGHPKSNSILYTN-GRSVIILDLSNPLQVS------IYGEHAYPATVARFSPN----GEWIASA--DVSGTVRIW 84 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~~~------~~~~h~~~v~~~~~sp~----g~~las~--~~d~~i~vW 84 (609)
.|..+++.|||..++.-. .+.|++++..++.... ++....+....++|+|+ |.+-++= ..+..|--|
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 566899999999888876 6788888765444211 11222455789999995 5544432 223344444
Q ss_pred cCCCC----------ceeeEEEee-cccceeEEEECCCCCEEEEEECCCC-----------cceEEEEEcCCCC------
Q 007283 85 GAHND----------HVLKKEFRV-LSGRIDDLQWSPDGLRIVACGDGKG-----------KSLVRAFMWDSGT------ 136 (609)
Q Consensus 85 d~~~~----------~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~-----------~~~~~~~~~~~~~------ 136 (609)
....+ +.+...+.. ..+.-..++|.|||..++++|+... ..++|+ .-+ ++
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi-~~d-G~ip~~nP 190 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRM-TPD-GEPAPGNP 190 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEE-CTT-SSBCTTCS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEE-eCC-CCccCCCC
Confidence 44331 111112211 1224567999999999999886321 123333 112 11
Q ss_pred --eeEEE-ecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCCCCce------------------eeeccCcccceEEEE
Q 007283 137 --NVGEF-DGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGPPFKF------------------KLSHRGHSNFVNCVR 195 (609)
Q Consensus 137 --~~~~~-~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~~~~~------------------~~~~~~h~~~v~~l~ 195 (609)
....+ .+|. ....++|+|++...++--+.|..-.+.-+..+.. ...+..+......++
T Consensus 191 f~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~ 269 (347)
T 3das_A 191 FPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIA 269 (347)
T ss_dssp STTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEE
T ss_pred CCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceE
Confidence 01112 2443 3457899998765444445543222221111100 011111112345566
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCccccc-cCcCCCCccceEEEEECCCCCeEEEEe
Q 007283 196 FSPDGSKFISVSSDKKGIIYDGKTADKIGE-LSPEDGHKGSVYAVSWSPDGKQVLTAS 252 (609)
Q Consensus 196 ~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~h~~~V~~l~~spd~~~l~s~s 252 (609)
|. +|.+++..-....|....+.....+.. .....+..+.+..+...|||.++++..
T Consensus 270 ~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 270 YA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 65 355555555555555444433221110 001123346789999999997665543
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.90 E-value=0.65 Score=50.12 Aligned_cols=158 Identities=9% Similarity=-0.049 Sum_probs=92.4
Q ss_pred CceeEEeecCCCCeEEEeC--CCEEEEEeCCCC----ccccccccCCCCcEEEEECCCCCEEE-EEeCCCcEEEEcCCCC
Q 007283 17 GRGILISGHPKSNSILYTN--GRSVIILDLSNP----LQVSIYGEHAYPATVARFSPNGEWIA-SADVSGTVRIWGAHND 89 (609)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~~----~~~~~~~~h~~~v~~~~~sp~g~~la-s~~~d~~i~vWd~~~~ 89 (609)
+.+..|.+++.++.|++.. .+.|+.+++... .....+...-.....+++.+.++.|. +-...+.|++.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 4567888888777676653 367777787642 22223332334577899998886665 4446788999988754
Q ss_pred ceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecCCCe
Q 007283 90 HVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGEDFL 169 (609)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~ 169 (609)
. ....+...-.....|++.|.+.+|..+.-+.. ..+.....+.......+.........|+++|.+..++.+=.....
T Consensus 504 ~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~-~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 504 K-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp S-EEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred e-EEEEEeCCCCCcceEEEecCCCCEEEecCCCC-CeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 3 22222223345789999998666665543321 233334444322222233334567889999877755555455567
Q ss_pred EEEEeCC
Q 007283 170 VNFYEGP 176 (609)
Q Consensus 170 i~~~~~~ 176 (609)
|...+..
T Consensus 582 I~~~d~d 588 (791)
T 3m0c_C 582 ISSIDVN 588 (791)
T ss_dssp EEEEETT
T ss_pred EEEEecC
Confidence 7777654
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.88 E-value=0.011 Score=63.29 Aligned_cols=204 Identities=10% Similarity=-0.049 Sum_probs=108.7
Q ss_pred ceeEEeecCCCCeEEEeC--CCEEEEEeCCC----CccccccccCCCCcEEEEECCCC-CEEEEEeCCCcEEEEcCCCCc
Q 007283 18 RGILISGHPKSNSILYTN--GRSVIILDLSN----PLQVSIYGEHAYPATVARFSPNG-EWIASADVSGTVRIWGAHNDH 90 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~--~~~~~i~~~~~----~~~~~~~~~h~~~v~~~~~sp~g-~~las~~~d~~i~vWd~~~~~ 90 (609)
++..+.++++++.|++.. .+.|..+++.+ ......+...-.....+++.+.+ ++.++-...+.|.+.+.....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456778888877777764 46788888865 22222222111235568898654 545554567889999987543
Q ss_pred eeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCC-CCeeEEEe-cCCccEEEEEEeeCCCeEEEEecCCC
Q 007283 91 VLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDS-GTNVGEFD-GHSRRVLSCAFKPSRPFRIATCGEDF 168 (609)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~h~~~v~~~~~~p~~~~~i~t~~~d~ 168 (609)
. ...+.........+++.|++.+|..+..+. ... ++..+. +.....+. ..-.....++|+|++..++++-...+
T Consensus 487 ~-~~l~~~~~~~P~giavDp~~g~ly~td~~~-~~~--I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 487 R-KTLFREQGSKPRAIVVDPVHGFMYWTDWGT-PAK--IKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp E-EEECCCSSCCCCCEECCSSSSCCEECCCSS-SCC--EEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred e-EEEEeCCCCCcceEEEccCCCcEEEcccCC-CCe--EEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence 2 222222223467889999766555433221 112 333332 22222221 22234567899998766566666677
Q ss_pred eEEEEeCCCCceeeecc--CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccccc
Q 007283 169 LVNFYEGPPFKFKLSHR--GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGEL 226 (609)
Q Consensus 169 ~i~~~~~~~~~~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~ 226 (609)
.|..++........... +.......|++..+ .++++....+.|..++..+++.+..+
T Consensus 563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 88888764322111111 11122233444433 34445555667777776666655443
No 300
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.83 E-value=0.0074 Score=64.65 Aligned_cols=230 Identities=9% Similarity=-0.067 Sum_probs=115.2
Q ss_pred CeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe-CCCcEEEEcCCCC---ceeeEEEeeccccee
Q 007283 29 NSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD-VSGTVRIWGAHND---HVLKKEFRVLSGRID 104 (609)
Q Consensus 29 ~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~-~d~~i~vWd~~~~---~~~~~~~~~~~~~v~ 104 (609)
..|++.+...|...++........... -..+..++|++.+..|..++ ..+.|+.+++... ......+........
T Consensus 378 ~~ll~~~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 378 AYLFFTNRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp CCBCCCCTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred eeEEecCccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 345566667788888876555433332 23466889999777666554 5678998887641 111111111112356
Q ss_pred EEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEec-CCCeEEEEeCCCCceeee
Q 007283 105 DLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCG-EDFLVNFYEGPPFKFKLS 183 (609)
Q Consensus 105 ~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~-~d~~i~~~~~~~~~~~~~ 183 (609)
.+++.+.+..|..+... ...+.+...+.......+.........++++|.+..++.+-. ..+.|...+.........
T Consensus 457 glavD~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp CEECCCSSSBCEECCTT--TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred eEEEEeeCCcEEEEecc--CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEE
Confidence 78888665555443222 223444444433222222222234567788886655444432 224555554322111111
Q ss_pred ccCcccceEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEEEEeCCCcEEEeec
Q 007283 184 HRGHSNFVNCVRFSPDGSKF-ISVSSDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVLTASADKSAKVWDI 262 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~dg~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~~i~iwd~ 262 (609)
........+.|+|+|++..| ++-+..+.|..++....... .+....+.-..-..|++..+ .++++....+.|..++.
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 11223345678999986544 44445678888887543221 22110011111233444433 34445556678888875
Q ss_pred c
Q 007283 263 S 263 (609)
Q Consensus 263 ~ 263 (609)
.
T Consensus 613 ~ 613 (699)
T 1n7d_A 613 L 613 (699)
T ss_dssp T
T ss_pred c
Confidence 3
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.72 E-value=0.38 Score=45.79 Aligned_cols=191 Identities=15% Similarity=0.170 Sum_probs=106.9
Q ss_pred EEeecCC---CCeEEEe-CCCEEEEEeCCCCccccccccCCCCcEEEEECCC----CCE--E-E-EEeC--CCcEEEEcC
Q 007283 21 LISGHPK---SNSILYT-NGRSVIILDLSNPLQVSIYGEHAYPATVARFSPN----GEW--I-A-SADV--SGTVRIWGA 86 (609)
Q Consensus 21 ~~~~~~~---~~~l~~~-~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~----g~~--l-a-s~~~--d~~i~vWd~ 86 (609)
++=.||. ...++.+ ....+.+||+ ++++++.+.. +.++.+.+-|+ |+. | + |-.. +.+|+++++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 5656664 2233333 4578999999 7777776653 45777766663 332 3 3 3334 578999977
Q ss_pred CCCceeeEEEee------c-ccceeEEEE--CCC-CCEEEEEECCCCcceEEEEEc-C--CC----CeeEEEecCCccEE
Q 007283 87 HNDHVLKKEFRV------L-SGRIDDLQW--SPD-GLRIVACGDGKGKSLVRAFMW-D--SG----TNVGEFDGHSRRVL 149 (609)
Q Consensus 87 ~~~~~~~~~~~~------~-~~~v~~~~~--spd-g~~l~~~~~~~~~~~~~~~~~-~--~~----~~~~~~~~h~~~v~ 149 (609)
+........... . ...+..+|+ +|+ ++..+.+.+..+ .+..|.. + .+ +.+..|.- ...+.
T Consensus 107 Dp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G--~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~E 183 (355)
T 3amr_A 107 DGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG--EFEQYELKADKNGYISGKKVRAFKM-NSQTE 183 (355)
T ss_dssp CTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS--EEEEEEEEECTTSCEEEEEEEEEEC-SSCEE
T ss_pred CCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC--eEEEEEEEeCCCCcccceEEEEecC-CCCcc
Confidence 422211222211 1 145677888 785 554455554332 2222222 1 12 23445543 34788
Q ss_pred EEEEeeCCCeEEEEecCCCeEEEEeCCC-----Cceeeec-cCcc-cceEEEEE--cCCCC-EEEEEe-CCCcEEEEeCC
Q 007283 150 SCAFKPSRPFRIATCGEDFLVNFYEGPP-----FKFKLSH-RGHS-NFVNCVRF--SPDGS-KFISVS-SDKKGIIYDGK 218 (609)
Q Consensus 150 ~~~~~p~~~~~i~t~~~d~~i~~~~~~~-----~~~~~~~-~~h~-~~v~~l~~--s~dg~-~l~s~~-~d~~i~iwd~~ 218 (609)
.|...+.... +..+-++.-|-.++.++ .+.+... .++. ..+..|++ .++|+ +|++++ .+.+..+||.+
T Consensus 184 gcvvDd~~g~-Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 184 GMAADDEYGR-LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEETTTTE-EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEcCCCCe-EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 9999987775 66677775544445432 2333332 2333 36888887 56666 565555 56789999865
No 302
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.39 E-value=1.2 Score=46.44 Aligned_cols=195 Identities=12% Similarity=0.029 Sum_probs=101.8
Q ss_pred CCeEEEeCCCEEEEEeCCCCccccccccCCCCc---------EEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEee
Q 007283 28 SNSILYTNGRSVIILDLSNPLQVSIYGEHAYPA---------TVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRV 98 (609)
Q Consensus 28 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v---------~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~ 98 (609)
+..++......++.+|..+++++-.+....... ..+++ .+..|..++.|+.+.-.|..+++.+-. +..
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~-~~~ 145 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWK-KKF 145 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEE-EEC
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEee-ecC
Confidence 333344443458888988888754443322110 11222 245566677899999999998875432 222
Q ss_pred ccc----ce-eEEEECC---CCCEEEEEECC----CCcceEEEEEcCCCCeeEEEecCCcc-------------------
Q 007283 99 LSG----RI-DDLQWSP---DGLRIVACGDG----KGKSLVRAFMWDSGTNVGEFDGHSRR------------------- 147 (609)
Q Consensus 99 ~~~----~v-~~~~~sp---dg~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~h~~~------------------- 147 (609)
... .+ ....... +|+.++.++.. .....+..++-.+++.+.........
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 110 11 1111111 24433333321 01223455555566666544321000
Q ss_pred ---------------------E-EEEEEeeCCCeEEEEecC-------------------C----CeEEEEeCCCCceee
Q 007283 148 ---------------------V-LSCAFKPSRPFRIATCGE-------------------D----FLVNFYEGPPFKFKL 182 (609)
Q Consensus 148 ---------------------v-~~~~~~p~~~~~i~t~~~-------------------d----~~i~~~~~~~~~~~~ 182 (609)
+ ...+++|....+++..+. | +.+.-+|..+++..-
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 0 124566666654443331 2 578888888887665
Q ss_pred ecc--Ccc--------cceEEEEEc-CCCC---EEEEEeCCCcEEEEeCCCCcccccc
Q 007283 183 SHR--GHS--------NFVNCVRFS-PDGS---KFISVSSDKKGIIYDGKTADKIGEL 226 (609)
Q Consensus 183 ~~~--~h~--------~~v~~l~~s-~dg~---~l~s~~~d~~i~iwd~~~~~~~~~~ 226 (609)
.+. .|. .++. +... .+|+ .++.++.+|.++++|..+++.+...
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 542 232 1221 1221 4674 6778899999999999998876543
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.38 E-value=0.2 Score=48.22 Aligned_cols=186 Identities=10% Similarity=0.098 Sum_probs=98.5
Q ss_pred EeecCCCCeEEEe-------------CCCEEEEEeCCCC--ccc-ccccc-----CCCCcEEEEECC--CCC--EEEEEe
Q 007283 22 ISGHPKSNSILYT-------------NGRSVIILDLSNP--LQV-SIYGE-----HAYPATVARFSP--NGE--WIASAD 76 (609)
Q Consensus 22 ~~~~~~~~~l~~~-------------~~~~~~i~~~~~~--~~~-~~~~~-----h~~~v~~~~~sp--~g~--~las~~ 76 (609)
+...|+|..++.+ ..+.|.++|+.++ +.. ..+.+ ..-.--.+.+.+ +|+ +++.-.
T Consensus 55 i~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh 134 (355)
T 3sre_A 55 LEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNH 134 (355)
T ss_dssp EEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEEC
T ss_pred eEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEEC
Confidence 3456777655554 3467889998743 211 11222 112333455544 454 444433
Q ss_pred C--CCcEEEEcCCCCc-ee--eEEEeec-ccceeEEEECCCCCEEEEEECCC------------CcceEEEEEcCCCCee
Q 007283 77 V--SGTVRIWGAHNDH-VL--KKEFRVL-SGRIDDLQWSPDGLRIVACGDGK------------GKSLVRAFMWDSGTNV 138 (609)
Q Consensus 77 ~--d~~i~vWd~~~~~-~~--~~~~~~~-~~~v~~~~~spdg~~l~~~~~~~------------~~~~~~~~~~~~~~~~ 138 (609)
. +.+|.||+++.+. .+ ...+... -.....+++.|+|..+++..-.. .....+++.++.++ +
T Consensus 135 ~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~ 213 (355)
T 3sre_A 135 PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-V 213 (355)
T ss_dssp STTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-C
T ss_pred CCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-E
Confidence 3 5789999887543 21 1222221 12467899999997666532110 11224555566543 2
Q ss_pred EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCC-CCcee--eeccCcccceEEEEEcC-CCCEEEEEeCC
Q 007283 139 GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGP-PFKFK--LSHRGHSNFVNCVRFSP-DGSKFISVSSD 209 (609)
Q Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~-~~~~~--~~~~~h~~~v~~l~~s~-dg~~l~s~~~d 209 (609)
..+...-..-+.++|+|++....++-+..+.|..|+.. .++.. ..+ ......-.+++.+ +|++.+++..+
T Consensus 214 ~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 214 RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 22323334567899999998766666667778877753 23221 122 1123345567777 47766555433
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.35 E-value=0.34 Score=48.77 Aligned_cols=155 Identities=12% Similarity=0.033 Sum_probs=88.7
Q ss_pred cEEEEECCC--CCEEEEEeCCCcEEEEcCCCCceeeEEEeec---ccceeEEEE-------CCCCCEEEEEECCCC----
Q 007283 60 ATVARFSPN--GEWIASADVSGTVRIWGAHNDHVLKKEFRVL---SGRIDDLQW-------SPDGLRIVACGDGKG---- 123 (609)
Q Consensus 60 v~~~~~sp~--g~~las~~~d~~i~vWd~~~~~~~~~~~~~~---~~~v~~~~~-------spdg~~l~~~~~~~~---- 123 (609)
-..++|+|. +++.++-...+.|++.|..++.+. ...... ......++| +++|++|++..+...
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 568899993 555555544567888888775532 222221 124789999 999997777665431
Q ss_pred cceEEEEEcCC-CCee-----EEEecCCccEEEEEEeeCCCeEEEEecCCCeEEEEeCC-------CCce----------
Q 007283 124 KSLVRAFMWDS-GTNV-----GEFDGHSRRVLSCAFKPSRPFRIATCGEDFLVNFYEGP-------PFKF---------- 180 (609)
Q Consensus 124 ~~~~~~~~~~~-~~~~-----~~~~~h~~~v~~~~~~p~~~~~i~t~~~d~~i~~~~~~-------~~~~---------- 180 (609)
..-+.+...+. +... ..+.. -.....++++|++..++++-..++.+..++.. +++.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 11122222222 1110 12211 11234678899766667777777888888765 3332
Q ss_pred ---eeeccCcccceEEEEEcCCCCEEEEE-eCCCcEEEEe
Q 007283 181 ---KLSHRGHSNFVNCVRFSPDGSKFISV-SSDKKGIIYD 216 (609)
Q Consensus 181 ---~~~~~~h~~~v~~l~~s~dg~~l~s~-~~d~~i~iwd 216 (609)
.....+....-..++|+|+|+.|..+ +....|+.++
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid 338 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD 338 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence 00111223345789999999954444 4567777754
No 305
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.00 E-value=1 Score=42.13 Aligned_cols=236 Identities=10% Similarity=0.082 Sum_probs=134.4
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec-
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL- 99 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~- 99 (609)
.+.-||..+.|+--+|..+.|+++++...+..+.- .++|.-=+|-.+. .|+-.. +..|.-|+++........|.-|
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 55569999999888899999999988766554433 3456655654333 333221 3569999887533222334333
Q ss_pred ---ccceeEEEECCCCCEEEEEE----CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEe--eCCCeEEE--EecC-C
Q 007283 100 ---SGRIDDLQWSPDGLRIVACG----DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFK--PSRPFRIA--TCGE-D 167 (609)
Q Consensus 100 ---~~~v~~~~~spdg~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--p~~~~~i~--t~~~-d 167 (609)
...|-..+-++|.++++.+| ++.-...++++..+.+. -..+.||......+.+. +....+++ .-+. .
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 34678889999999999877 33222334455544432 23456665544333221 11111222 2222 2
Q ss_pred CeEEEEeCCC---Cceee------ecc---CcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCccc
Q 007283 168 FLVNFYEGPP---FKFKL------SHR---GHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKGS 235 (609)
Q Consensus 168 ~~i~~~~~~~---~~~~~------~~~---~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~~ 235 (609)
+.+.+-+... +...+ .+. ...+.--++..++.-..+...+.-|.+.+||.+++.++..-.. ....
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI---S~d~ 303 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGET 303 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSSC
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc---CCCc
Confidence 3566665421 11110 011 1234445777888777788888999999999999988754321 2334
Q ss_pred eEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 236 VYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 236 V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
|...+-+....-++.....|.|.--.++
T Consensus 304 iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 304 IFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred eEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 5444444444445555566666555444
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.93 E-value=0.39 Score=45.25 Aligned_cols=155 Identities=11% Similarity=0.122 Sum_probs=95.9
Q ss_pred eeEEEEcCCCCEEEEEe-CCCcEEEEEecCCeeeeeEEEecC------CCceEEEEE---CCCCCEEEEEeC--------
Q 007283 450 VTASAIAPDGSEAIIGS-QDGKLRVYSIRGDTLTEEAVLEKH------RGAVSVIRY---SPDVSMFASGDV-------- 511 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs-~dg~i~iw~~~~~~~~~~~~~~~h------~~~i~~v~~---s~~~~~l~s~s~-------- 511 (609)
..+.++.+....+..++ ..++|..|+...+..... .+.+- ...+..|.+ .|+++++++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34567766444555554 799999998765543322 22221 114578999 688888886442
Q ss_pred -----CCeEEEEEcc---CCceE-EeeecCC-----------CCceEEEEECCCCcEEEEEeCC-CeEEEEEcCCCCCcc
Q 007283 512 -----NREAIVWDRV---SREVK-LKNMLYH-----------TARINCLAWSPNNSMVATGSLD-TCVIIYEIDKPASSR 570 (609)
Q Consensus 512 -----d~~v~iwd~~---~~~~~-~~~~~~h-----------~~~i~~l~~s~d~~~l~s~s~D-~~v~vw~~~~~~~~~ 570 (609)
+..+..||+. +++.. ...+... ......++..++|+..++++.- +.|...+.+ +...
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd--G~~~ 171 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD--GKTV 171 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT--SCCE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC--CCEE
Confidence 6789999987 44332 2222111 1248899999999999998888 765554433 2121
Q ss_pred eeEe-----ccccCCeEEEEEc-CCCeEEEEeCCCcEEEEEcc
Q 007283 571 MTIK-----GAHLGGVYGLAFT-DEHSVVSSGEDACVRVWRLT 607 (609)
Q Consensus 571 ~~~~-----~~h~~~v~~~~~s-~~~~l~s~s~D~~i~~W~~~ 607 (609)
.... .......+.+++. ++..|+....++.+..+++.
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 1111 1122346789999 67777766558888887764
No 307
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.77 E-value=1.3 Score=41.53 Aligned_cols=211 Identities=7% Similarity=0.018 Sum_probs=110.9
Q ss_pred cCCCCeEEEeC---CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeC-C-------------CcEEEEcCC
Q 007283 25 HPKSNSILYTN---GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADV-S-------------GTVRIWGAH 87 (609)
Q Consensus 25 ~~~~~~l~~~~---~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~-d-------------~~i~vWd~~ 87 (609)
.++|..|++.+ +..++..+...... ..+.. -.+--++|+|.+|.-+.. + ..|+..+.+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~----~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSN----DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSC-EEEEE----EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCC-EEccC----CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 45778888875 46666666544333 33432 234557899999985543 2 356666665
Q ss_pred CCceeeEEEeecccceeEEEECCCCCEEEEEE-CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEecC
Q 007283 88 NDHVLKKEFRVLSGRIDDLQWSPDGLRIVACG-DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATCGE 166 (609)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~~~ 166 (609)
..+. ..+.. -....|+|++++|.-+. +..+...+.....+. +....+..+.. .+++|++..+.-+...
T Consensus 97 g~~~--~~l~~----~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 97 GHGS--TVLDP----DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp SCCC--EEEEC----SCEEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----CCSEEETTEEEEECTT
T ss_pred CCcc--eEeec----CCccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----eEeeEECCEEEEEeCC
Confidence 5431 12221 12347889999988775 111222344444443 33334444432 4567888875555443
Q ss_pred CCeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCccccccCcCCCCccceEEEEECCC
Q 007283 167 DFLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDK--KGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPD 244 (609)
Q Consensus 167 d~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd 244 (609)
...|..-+.........+.+. .. ..+.|++.+|+-...+. .|..-+..... ...+. ...+ ..|+|+
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~~---~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-----~~~~--~~~~~~ 233 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDCN---CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-----EANI--EHYNVY 233 (302)
T ss_dssp TCCEEEEETTTTEEEEEECSC---EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-----CSCE--EEEEEE
T ss_pred CceEEEEECCCCCEEEEeCCC---cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-----CCCc--ceEEEC
Confidence 455665555444333333321 11 23568888877665432 44444444333 22221 1223 347888
Q ss_pred CCeEEEEeC--CCcEEEeecc
Q 007283 245 GKQVLTASA--DKSAKVWDIS 263 (609)
Q Consensus 245 ~~~l~s~s~--d~~i~iwd~~ 263 (609)
+.+|..+.. .+.|..-++.
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETT
T ss_pred CCEEEEEECCCCcEEEEEECC
Confidence 888876532 3445555544
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.72 E-value=0.59 Score=44.04 Aligned_cols=158 Identities=10% Similarity=0.087 Sum_probs=92.9
Q ss_pred EEEEECC-CCCEEEEEeCCCcEEEEcCCCCceeeEEEeecc------cceeEEEE---CCCCCEEEEEECC---------
Q 007283 61 TVARFSP-NGEWIASADVSGTVRIWGAHNDHVLKKEFRVLS------GRIDDLQW---SPDGLRIVACGDG--------- 121 (609)
Q Consensus 61 ~~~~~sp-~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~------~~v~~~~~---spdg~~l~~~~~~--------- 121 (609)
.+++|++ +|++.++.-..++|-.|+...+......+.... ..+..+.| .|+|+.++++..+
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4678977 555556655799999999875543222222211 13578999 6887655543210
Q ss_pred -CCcceEEEEEcC---CCCeeEEEe--cC-----------CccEEEEEEeeCCCeEEEEecCC-CeEEEEeCCCCceee-
Q 007283 122 -KGKSLVRAFMWD---SGTNVGEFD--GH-----------SRRVLSCAFKPSRPFRIATCGED-FLVNFYEGPPFKFKL- 182 (609)
Q Consensus 122 -~~~~~~~~~~~~---~~~~~~~~~--~h-----------~~~v~~~~~~p~~~~~i~t~~~d-~~i~~~~~~~~~~~~- 182 (609)
.+...+..++.+ +++.+.... .. ......++..++|.. .++++.. ..|...+..-.....
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-YVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-YVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-EEEEEESSCEEEEECTTSCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE-EEeCCCCCCeEEEEeCCCCEEeee
Confidence 112335556666 555544332 21 124778999999874 5656555 544444322111110
Q ss_pred --ec--cCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 007283 183 --SH--RGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKT 219 (609)
Q Consensus 183 --~~--~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~ 219 (609)
.. .......+.++++|+|+.|++...++.+..+|...
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 11 12233467899999999888887799999999774
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.54 E-value=1.8 Score=42.14 Aligned_cols=66 Identities=6% Similarity=-0.001 Sum_probs=47.4
Q ss_pred EeecCCCCeEEEeCCCEEEEEeCCCCccccccccC----CCCcEEEEECCCCCEEEEEeCCCcEEEEcCCC
Q 007283 22 ISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEH----AYPATVARFSPNGEWIASADVSGTVRIWGAHN 88 (609)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h----~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~ 88 (609)
....-+|.-|+...|+.++..++.+....+.+.-- -+.|..+..||+|++||..+ +.+|.|=.+..
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~ 95 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPW 95 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCT
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecC
Confidence 34445678888888999999998754433333321 13588899999999999774 56888887763
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.50 E-value=1.9 Score=41.43 Aligned_cols=197 Identities=18% Similarity=0.165 Sum_probs=110.3
Q ss_pred EEEEECCCCCEEEEE------------eCCCcEEEEcCCCC--ceeeEEEee--c---ccceeEEEECC--CCC-EEEEE
Q 007283 61 TVARFSPNGEWIASA------------DVSGTVRIWGAHND--HVLKKEFRV--L---SGRIDDLQWSP--DGL-RIVAC 118 (609)
Q Consensus 61 ~~~~~sp~g~~las~------------~~d~~i~vWd~~~~--~~~~~~~~~--~---~~~v~~~~~sp--dg~-~l~~~ 118 (609)
..+++.|+|..+.++ ..+|.|-++|..+. +.....++. . .-..-.+.+.+ ||. +|+++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 345678888766665 26888999998742 322222332 1 12345566655 454 67777
Q ss_pred ECCCCcceEEEEEcCCCCe----eEEEecC-CccEEEEEEeeCCCeEEEEec-----------------CCCeEEEEeCC
Q 007283 119 GDGKGKSLVRAFMWDSGTN----VGEFDGH-SRRVLSCAFKPSRPFRIATCG-----------------EDFLVNFYEGP 176 (609)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~----~~~~~~h-~~~v~~~~~~p~~~~~i~t~~-----------------~d~~i~~~~~~ 176 (609)
...+....+.++.++.+.. +..+.+. -...+.+.+.|+|.+ .++.. ..+.+..++.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f-yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF-YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE-EEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE-EecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 7665556677777775432 2234333 245789999999874 44432 1133444443
Q ss_pred CCceeeeccCcccceEEEEEcCCCCEEEEEe-CCCcEEEEeCCCCccccccCcCCCCccceEEEEECC-CCCeEEEEeCC
Q 007283 177 PFKFKLSHRGHSNFVNCVRFSPDGSKFISVS-SDKKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSP-DGKQVLTASAD 254 (609)
Q Consensus 177 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~sp-d~~~l~s~s~d 254 (609)
.+... .......-+.++|+||++.|..+. ..+.|..|+......+...... ...+..-.+++.+ +|.+.+++..+
T Consensus 211 -~~~~~-~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 -NDVRV-VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -TCCEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred -CeEEE-eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 22222 122234568899999998766654 5678888887532212111001 1134456788888 58877766533
Q ss_pred -CcEEEeec
Q 007283 255 -KSAKVWDI 262 (609)
Q Consensus 255 -~~i~iwd~ 262 (609)
+.|..|+.
T Consensus 288 g~~v~~~~P 296 (355)
T 3sre_A 288 GMRIFFYDA 296 (355)
T ss_dssp HHHHHSCCT
T ss_pred ceEEEEECC
Confidence 34444443
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.42 E-value=0.56 Score=41.16 Aligned_cols=103 Identities=9% Similarity=0.079 Sum_probs=61.5
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEEecCCee----eeeEEEe--cCCCceEEEEECCCCCEEEEEeCCCeEEEEEccC
Q 007283 449 PVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTL----TEEAVLE--KHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVS 522 (609)
Q Consensus 449 ~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~----~~~~~~~--~h~~~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~ 522 (609)
.+..++++|+|.+.++ .+|.|+-.+..+... .....+. +-. .-.++.|.|+|.+.++ .|+.++-++.-+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 4678999999998777 677654444322110 0001110 111 1378899999999998 669888776422
Q ss_pred Cce-EE--eeecCCC---CceEEEEECCCCcEEEEEeCCCeE
Q 007283 523 REV-KL--KNMLYHT---ARINCLAWSPNNSMVATGSLDTCV 558 (609)
Q Consensus 523 ~~~-~~--~~~~~h~---~~i~~l~~s~d~~~l~s~s~D~~v 558 (609)
... .. ...+..+ ..+..|.|.|+|.+.+.. |+.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 111 00 0000011 467999999999987766 7764
No 312
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.39 E-value=2.2 Score=41.66 Aligned_cols=235 Identities=11% Similarity=0.102 Sum_probs=138.1
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEE-CCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARF-SPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~-sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
.+.-||..+.|+--+|..+.||++++...+..+.-. ++|.-=+| +|+ .|+-. .+..|.-|+++........|.-|
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~-e~VvfWkWis~~--~l~lV-T~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLN--TVALV-TDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECS-SCCCEEEEEETT--EEEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecC-CCceEEEecCCC--eEEEE-cCCeeEEecccCCCCchhheecc
Confidence 566899999999888999999999887665544433 34544444 343 34333 24579999987533222334333
Q ss_pred ----ccceeEEEECCCCCEEEEEE----CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeC--CCeEEEEecC---
Q 007283 100 ----SGRIDDLQWSPDGLRIVACG----DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPS--RPFRIATCGE--- 166 (609)
Q Consensus 100 ----~~~v~~~~~spdg~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~i~t~~~--- 166 (609)
+..|-..+-++|.++++.+| ++.-...+.++..+.+. -..+.||......+.+.-+ ...+++-+.+
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 34688899999999999877 33233344555555433 2345677654443333211 1122332222
Q ss_pred CCeEEEEeCCC-------C-ceeee-c---cCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCcc
Q 007283 167 DFLVNFYEGPP-------F-KFKLS-H---RGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKG 234 (609)
Q Consensus 167 d~~i~~~~~~~-------~-~~~~~-~---~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~ 234 (609)
.+.+.+-+... + +.... + ....+.--++..++.-..+...+.-|.+.+||.+++.++..-.. ...
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI---s~~ 301 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGE 301 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC---CSS
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc---cCC
Confidence 24566665421 1 11001 1 11234445788888877888889999999999999988764321 234
Q ss_pred ceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 235 SVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 235 ~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.|...+-+....-++.....|.|.--.++
T Consensus 302 ~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 302 TIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred ceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 45555555555556666667766655554
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.97 E-value=2 Score=43.05 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=58.8
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEEec------CCCceEEEEECCC----CCEEEEEeC--------
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEK------HRGAVSVIRYSPD----VSMFASGDV-------- 511 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~~~------h~~~i~~v~~s~~----~~~l~s~s~-------- 511 (609)
...+++.|||+++++-...+.|++++...+.......+.. -.+.+..|+|+|| +.+.++-+.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 5688999999977765444568877654333322112211 2456789999994 555554432
Q ss_pred ----CCeEEEEEccCC-------ceEEeeec-CCCCceEEEEECCCCcEEEEEe
Q 007283 512 ----NREAIVWDRVSR-------EVKLKNML-YHTARINCLAWSPNNSMVATGS 553 (609)
Q Consensus 512 ----d~~v~iwd~~~~-------~~~~~~~~-~h~~~i~~l~~s~d~~~l~s~s 553 (609)
...|.-++.... +..+..+. ...+....++|.|||++.++-+
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555543321 11111111 1224578999999999777643
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.89 E-value=0.88 Score=43.92 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=59.7
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeeeeEEE---ecCCCceEEEEECCC----CCEEEEEeCC-----CeEEE
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVL---EKHRGAVSVIRYSPD----VSMFASGDVN-----REAIV 517 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~~~~~---~~h~~~i~~v~~s~~----~~~l~s~s~d-----~~v~i 517 (609)
...+++.|||+++++ ..+|.|++++ .+.......+ ..-......|+|+|+ +.+.++-... ..|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 567899999996555 5679999988 3332211111 112356889999998 4444444332 56777
Q ss_pred EEccCCce-----EEeeec---CCCCceEEEEECCCCcEEEEE
Q 007283 518 WDRVSREV-----KLKNML---YHTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 518 wd~~~~~~-----~~~~~~---~h~~~i~~l~~s~d~~~l~s~ 552 (609)
++...... .+..+. ........++|.|||.+.++-
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 77654311 111121 111234689999999876664
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.87 E-value=1.1 Score=42.76 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=36.4
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceee-EEE----eecccceeEEEECCC
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVLK-KEF----RVLSGRIDDLQWSPD 111 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~-~~~----~~~~~~v~~~~~spd 111 (609)
.-..++|.|||+++++-...|.|++++..+++... ..+ ....+....++|+||
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 46789999999988887668999998765443211 111 112345788999996
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.79 E-value=2.7 Score=42.01 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=60.8
Q ss_pred ceeEEeecCCCCeEEEeCC-CEEEEEeCCCCcccc--ccc------cCCCCcEEEEECCC----CCEEEEEeC------C
Q 007283 18 RGILISGHPKSNSILYTNG-RSVIILDLSNPLQVS--IYG------EHAYPATVARFSPN----GEWIASADV------S 78 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~-~~~~i~~~~~~~~~~--~~~------~h~~~v~~~~~sp~----g~~las~~~------d 78 (609)
.|..+++.|+|..++.-.. ..|++++..++.... .+. ...+....++|+|| |.+.++-+. +
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 6779999999998887754 578887765443321 111 12345778999994 544444322 1
Q ss_pred ------CcEEEEcCCCC--c-----eeeEEEee-cccceeEEEECCCCCEEEEEECC
Q 007283 79 ------GTVRIWGAHND--H-----VLKKEFRV-LSGRIDDLQWSPDGLRIVACGDG 121 (609)
Q Consensus 79 ------~~i~vWd~~~~--~-----~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~ 121 (609)
..|.-++...+ + .+...+.. ..+....++|.|||..++++|+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~ 164 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQ 164 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCT
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCC
Confidence 13333443221 1 11111211 12346889999999999998874
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.45 E-value=3.7 Score=39.49 Aligned_cols=186 Identities=14% Similarity=0.119 Sum_probs=88.8
Q ss_pred CceeEEeecCC----CCeEEEeC----C----CEEEEEeCCCCc-----cccc---cc-cCCCCcEEEEECCCCCEEEEE
Q 007283 17 GRGILISGHPK----SNSILYTN----G----RSVIILDLSNPL-----QVSI---YG-EHAYPATVARFSPNGEWIASA 75 (609)
Q Consensus 17 ~~~~~~~~~~~----~~~l~~~~----~----~~~~i~~~~~~~-----~~~~---~~-~h~~~v~~~~~sp~g~~las~ 75 (609)
+.+..|+++|+ +...++-. . ..|..++..... .... +. +....-..++|.|||++.++.
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence 45788999997 44333322 1 567777765431 1111 11 111234678999999987764
Q ss_pred eCC-------------CcEEEEcCCCCce-------eeEEEeecccceeEEEECC-CCCEEEEEECCCCcceEEEEEcCC
Q 007283 76 DVS-------------GTVRIWGAHNDHV-------LKKEFRVLSGRIDDLQWSP-DGLRIVACGDGKGKSLVRAFMWDS 134 (609)
Q Consensus 76 ~~d-------------~~i~vWd~~~~~~-------~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~ 134 (609)
+.. |.|.-.+.+.. . ....+..--.....++|+| +|+.+++ -.+... .-.+.....
T Consensus 153 G~~~~~~~~~d~~~~~G~I~ri~~dG~-~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~-d~g~~~-~dei~~i~~ 229 (354)
T 3a9g_A 153 GDAADPRLAQDLSSLAGKILRVDEEGR-PPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVAT-EHGPVG-HDEVNIILK 229 (354)
T ss_dssp CCTTCGGGGTCTTCCSSEEEEECTTSC-CCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEE-ECCSSS-CCEEEEECT
T ss_pred CCCCCCccccCCCCCCeEEEEEcCCCC-CCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEE-ecCCCC-CcEEEEecC
Confidence 321 33433333221 0 0011111123456899999 5654444 322211 001111111
Q ss_pred CC------------------eeEEEecCCccEEEEEEe-------eCCCeEEEEecCCCeEEEEeCCCC-cee--ee-cc
Q 007283 135 GT------------------NVGEFDGHSRRVLSCAFK-------PSRPFRIATCGEDFLVNFYEGPPF-KFK--LS-HR 185 (609)
Q Consensus 135 ~~------------------~~~~~~~h~~~v~~~~~~-------p~~~~~i~t~~~d~~i~~~~~~~~-~~~--~~-~~ 185 (609)
+. .+..+.........++|. .++. .+++.-..+.|...+.... +.. .. +.
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~ 308 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDNMEVRKISTFFK 308 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGGGCEEEEEEECT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCCCcccceeeecc
Confidence 11 122221112346677773 3453 3555555555555554321 211 12 22
Q ss_pred CcccceEEEEEcCCCCEEEEE
Q 007283 186 GHSNFVNCVRFSPDGSKFISV 206 (609)
Q Consensus 186 ~h~~~v~~l~~s~dg~~l~s~ 206 (609)
+....+..+++.|||.++++.
T Consensus 309 ~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 309 NVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp TTSCCEEEEEECTTSCEEEEE
T ss_pred CCCCCeeEEEECCCCcEEEEE
Confidence 324467889999999766554
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.13 E-value=0.51 Score=46.00 Aligned_cols=98 Identities=16% Similarity=0.263 Sum_probs=66.1
Q ss_pred eEEeecCCCCeEEEeCCCEEEEEeCCCCccc------------cccc-c-----CCCCcEEEEECCCC---CEEEEEeCC
Q 007283 20 ILISGHPKSNSILYTNGRSVIILDLSNPLQV------------SIYG-E-----HAYPATVARFSPNG---EWIASADVS 78 (609)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~------------~~~~-~-----h~~~v~~~~~sp~g---~~las~~~d 78 (609)
..+..+|+|+.|+..+...+.|..+..+... +.|. + .+.+|..+.|+|-| .-|+.--.|
T Consensus 69 ~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 69 FHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred eEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC
Confidence 3689999999999888889999988743211 1121 1 24679999999954 568888889
Q ss_pred CcEEEEcCCCCc--e--eeEEEee-----cccceeEEEECCCCCEEEE
Q 007283 79 GTVRIWGAHNDH--V--LKKEFRV-----LSGRIDDLQWSPDGLRIVA 117 (609)
Q Consensus 79 ~~i~vWd~~~~~--~--~~~~~~~-----~~~~v~~~~~spdg~~l~~ 117 (609)
++||+||+.... . +...... ....|.+++|+++|..|-+
T Consensus 149 ~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 149 DTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp SCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred CEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 999999997522 1 1111111 1256788899987754443
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.99 E-value=1 Score=39.52 Aligned_cols=97 Identities=12% Similarity=0.032 Sum_probs=56.1
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCc--------EEEEECCCCCEEEEEeCCCcEEEEcCCCCce-
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPA--------TVARFSPNGEWIASADVSGTVRIWGAHNDHV- 91 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v--------~~~~~sp~g~~las~~~d~~i~vWd~~~~~~- 91 (609)
.+++||+|...+. ....++-.+..+.....-+.. ...| .++.|.|+|.+.|+ .||.|.=|+-.+...
T Consensus 45 ~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 45 FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred eEEECCCccEEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 7999999985554 334444444433111111111 2223 68899999999988 459887777643221
Q ss_pred --ee--EEE-eecccceeEEEECCCCCEEEEEECCC
Q 007283 92 --LK--KEF-RVLSGRIDDLQWSPDGLRIVACGDGK 122 (609)
Q Consensus 92 --~~--~~~-~~~~~~v~~~~~spdg~~l~~~~~~~ 122 (609)
+. ..+ +.-=..+..|.|.|+|...++. +++
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ 155 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQ 155 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred ceeccccEeccCCCCceEEEEECCCceEEEEe-CCc
Confidence 00 011 0011357999999999766665 543
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.92 E-value=1.6 Score=40.94 Aligned_cols=166 Identities=8% Similarity=-0.025 Sum_probs=84.4
Q ss_pred EeecCCCCeEEEeCC---------------CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEe--CCCcEEEE
Q 007283 22 ISGHPKSNSILYTNG---------------RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASAD--VSGTVRIW 84 (609)
Q Consensus 22 ~~~~~~~~~l~~~~~---------------~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~--~d~~i~vW 84 (609)
-.++++|++|+|.+. ..|+..++....... +.. + ...+|+|+|++|+-.+ .++.-+|+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--D--PCIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--S--CEEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--C--CccEEEEeCCEEEEEeecCCCCceEE
Confidence 346789999999842 356677776655433 321 1 1237889999998665 45555555
Q ss_pred cCCCCceeeEEEeecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEeeCCCeEEEEe
Q 007283 85 GAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPSRPFRIATC 164 (609)
Q Consensus 85 d~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~i~t~ 164 (609)
...........+..+ .+ .+|+|+|+.|.-+.++.. .+.....+.+.....+.+ ... ..++|++..++-+-
T Consensus 133 ~~~~dGs~~~~lt~~--~~--~~~~~~g~~iy~t~~g~~--~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 133 RIRIDGEEKKKIKNH--YL--FTCNTSDRYFYYNNPKNG--QLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp EEETTSCCCEEEESS--CC--CCSEEETTEEEEECTTTC--CEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEE
T ss_pred EEECCCCCeEEEeCC--Cc--eEeeEECCEEEEEeCCCc--eEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEE
Confidence 443222112223322 22 567889999998876332 344444443322222222 122 24568887654443
Q ss_pred cCC-CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEe
Q 007283 165 GED-FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVS 207 (609)
Q Consensus 165 ~~d-~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 207 (609)
..+ ..|..-+..... ...+.. ..+ ..|+|++++|.-+.
T Consensus 203 ~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 203 VNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp GGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEE
T ss_pred cCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEE
Confidence 222 233222222111 112211 122 34777888776553
No 321
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.57 E-value=5.2 Score=38.02 Aligned_cols=76 Identities=11% Similarity=0.122 Sum_probs=45.7
Q ss_pred eccCCceeEEEEcCCCCEEEEEeCCCcEEEEEecCC--e---eeeeEEE--ecCCCceEEEEE--CCCCC-EEEEEe-CC
Q 007283 444 INLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGD--T---LTEEAVL--EKHRGAVSVIRY--SPDVS-MFASGD-VN 512 (609)
Q Consensus 444 ~~~~~~~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~--~---~~~~~~~--~~h~~~i~~v~~--s~~~~-~l~s~s-~d 512 (609)
+.....+..+++.+....|.++-+|.- ||.+... . ....... ......+..|++ .++++ +++++| .+
T Consensus 176 f~lgsq~EgcvvDd~~g~Lyv~eEd~G--Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~ 253 (355)
T 3amr_A 176 FKMNSQTEGMAADDEYGRLYIAEEDEA--IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN 253 (355)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTTE--EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG
T ss_pred ecCCCCcceEEEcCCCCeEEEecccce--EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC
Confidence 333345667778888888999988855 5555422 1 1111111 122246777777 56666 555555 56
Q ss_pred CeEEEEEcc
Q 007283 513 REAIVWDRV 521 (609)
Q Consensus 513 ~~v~iwd~~ 521 (609)
.+..+||..
T Consensus 254 ~s~~Vydr~ 262 (355)
T 3amr_A 254 SSYAIYDRQ 262 (355)
T ss_dssp TEEEEEESS
T ss_pred CEEEEEECC
Confidence 799999986
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.56 E-value=4.7 Score=37.48 Aligned_cols=215 Identities=11% Similarity=0.007 Sum_probs=94.3
Q ss_pred CEEEEEeCCCCccccc--cccCCCCcEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCcee-eEEEeeccc---ceeE
Q 007283 37 RSVIILDLSNPLQVSI--YGEHAYPATVARFSPNGEWIASADVS-----GTVRIWGAHNDHVL-KKEFRVLSG---RIDD 105 (609)
Q Consensus 37 ~~~~i~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~las~~~d-----~~i~vWd~~~~~~~-~~~~~~~~~---~v~~ 105 (609)
+.+.+||..+.+.... +...+..-.++. -++++++.|+.+ ..+.++|..+.+.. -..+..... ....
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 3677888877653221 111122222222 357777777654 36888888765410 111211111 1122
Q ss_pred EEECCCCCEEEEEECCCCcceEEEEEcCCCCee----EEEecCCccEEEEEEeeCCCeEEEEecCC-----CeEEEEeCC
Q 007283 106 LQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNV----GEFDGHSRRVLSCAFKPSRPFRIATCGED-----FLVNFYEGP 176 (609)
Q Consensus 106 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~~~~~p~~~~~i~t~~~d-----~~i~~~~~~ 176 (609)
+.+ +++.++..|.......-.++.++..... ..+......- ++.. -++ .+++.||.+ ..+..||..
T Consensus 109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~~~~~~~~~~~~~d~~ 183 (301)
T 2vpj_A 109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGA-GLVV-ASG-VIYCLGGYDGLNILNSVEKYDPH 183 (301)
T ss_dssp EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC-EEEE-ETT-EEEEECCBCSSCBCCCEEEEETT
T ss_pred EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccc-eEEE-ECC-EEEEECCCCCCcccceEEEEeCC
Confidence 222 5544444432222112223444432221 1111111111 1111 234 356667654 346777876
Q ss_pred CCceeee--ccCcccceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeEE
Q 007283 177 PFKFKLS--HRGHSNFVNCVRFSPDGSKFISVSSD-----KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQVL 249 (609)
Q Consensus 177 ~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l~ 249 (609)
+.+.... +......-.++.+ ++.+++.|+.+ ..+.+||..+.+-. .+............+.+ +++.++
T Consensus 184 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~--~~~i~v 258 (301)
T 2vpj_A 184 TGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT-TVTSMTTPRCYVGATVL--RGRLYA 258 (301)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE--TTEEEE
T ss_pred CCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE-ECCCCCCcccceeEEEE--CCEEEE
Confidence 6554332 1111111222222 56677777654 46888998765422 22111111111122222 566777
Q ss_pred EEeCC-----CcEEEeecc
Q 007283 250 TASAD-----KSAKVWDIS 263 (609)
Q Consensus 250 s~s~d-----~~i~iwd~~ 263 (609)
.|+.+ ..+.+||+.
T Consensus 259 ~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp ECCBCSSSBEEEEEEEETT
T ss_pred EcCcCCCcccccEEEEcCC
Confidence 77655 345666665
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.37 E-value=8.9 Score=43.69 Aligned_cols=235 Identities=10% Similarity=0.074 Sum_probs=126.6
Q ss_pred EEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEE-CCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 21 LISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARF-SPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~-sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
.+.-||..+.|+--+|..+.||++++...+..+.- ..+|.-=+| +|+-=-|+| +..|.-|++.........|.-|
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred hhccCCCcceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcc
Confidence 45578999988888899999999977655443332 234555454 343322333 3569999986422111112222
Q ss_pred ----ccceeEEEECCCCCEEEEEE----CCCCcceEEEEEcCCCCeeEEEecCCccEEEEEEe--eCCCeEEEEec---C
Q 007283 100 ----SGRIDDLQWSPDGLRIVACG----DGKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFK--PSRPFRIATCG---E 166 (609)
Q Consensus 100 ----~~~v~~~~~spdg~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--p~~~~~i~t~~---~ 166 (609)
+..|...+-++|.++++.+| ++.-...+.++..+.+.. ..+.||......+... +....+++-+. .
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~ 224 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCC
Confidence 45688889999999999887 233333455555544321 1234554333222221 11111222111 1
Q ss_pred CCeEEEEeCCC---Cceee------eccC---cccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcCCCCcc
Q 007283 167 DFLVNFYEGPP---FKFKL------SHRG---HSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPEDGHKG 234 (609)
Q Consensus 167 d~~i~~~~~~~---~~~~~------~~~~---h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~h~~ 234 (609)
.+.+.+-++.. +...+ .+.. -.+.-.++..++.-..+...+.-|.+.+||..++.++..-.. ...
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri---s~~ 301 (1630)
T 1xi4_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI---SGE 301 (1630)
T ss_pred CceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc---cCC
Confidence 13455554321 11110 0111 123334677777766777888999999999999988764321 223
Q ss_pred ceEEEEECCCCCeEEEEeCCCcEEEeecc
Q 007283 235 SVYAVSWSPDGKQVLTASADKSAKVWDIS 263 (609)
Q Consensus 235 ~V~~l~~spd~~~l~s~s~d~~i~iwd~~ 263 (609)
.|.-.+-++...-++.....|.|.--.++
T Consensus 302 ~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 302 TIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred ceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 44444444433345555566665554443
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.09 E-value=4.2 Score=37.84 Aligned_cols=144 Identities=13% Similarity=0.168 Sum_probs=73.5
Q ss_pred CCCEEEEEeCCC-----cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCC-----CeEEEEEccCCceEE
Q 007283 458 DGSEAIIGSQDG-----KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVN-----REAIVWDRVSREVKL 527 (609)
Q Consensus 458 ~g~~l~~gs~dg-----~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 527 (609)
+++.++.|+.++ .+.+||..++.......+......-.++.+ ++++++.|+.+ ..+.+||..+.+...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 566666666543 577888776654332222211111222222 67788887765 458889987766543
Q ss_pred ee-ecCCCCceEEEEECCCCcEEEEEeCC-----CeEEEEEcCCCCCcceeEeccccCCe-EEEEEcCCCeEEEEeCCC-
Q 007283 528 KN-MLYHTARINCLAWSPNNSMVATGSLD-----TCVIIYEIDKPASSRMTIKGAHLGGV-YGLAFTDEHSVVSSGEDA- 599 (609)
Q Consensus 528 ~~-~~~h~~~i~~l~~s~d~~~l~s~s~D-----~~v~vw~~~~~~~~~~~~~~~h~~~v-~~~~~s~~~~l~s~s~D~- 599 (609)
.. +........++.+ ++++++.|+.+ ..+.+||..+..-..+. .....+. .++...+++.++.||.++
T Consensus 190 ~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT--SMTTPRCYVGATVLRGRLYAIAGYDGN 265 (301)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred CCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECC--CCCCcccceeEEEECCEEEEEcCcCCC
Confidence 21 1111111223333 67888888765 46888887653211111 1111111 122233667777777653
Q ss_pred ----cEEEEEcc
Q 007283 600 ----CVRVWRLT 607 (609)
Q Consensus 600 ----~i~~W~~~ 607 (609)
.+.++|+.
T Consensus 266 ~~~~~v~~yd~~ 277 (301)
T 2vpj_A 266 SLLSSIECYDPI 277 (301)
T ss_dssp SBEEEEEEEETT
T ss_pred cccccEEEEcCC
Confidence 45555553
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.16 E-value=4.1 Score=38.02 Aligned_cols=145 Identities=12% Similarity=0.123 Sum_probs=72.3
Q ss_pred CCCEEEEEeCC------CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeC---------CCeEEEEEccC
Q 007283 458 DGSEAIIGSQD------GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDV---------NREAIVWDRVS 522 (609)
Q Consensus 458 ~g~~l~~gs~d------g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~---------d~~v~iwd~~~ 522 (609)
+++.++.|+.+ ..+.+||..++.......+......-.++. -++++++.|+. -..+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 56667777655 458888877665432211111111112222 26677777764 34578899887
Q ss_pred CceEEeeecC-CCCceEEEEECCCCcEEEEEeCC-----CeEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEe
Q 007283 523 REVKLKNMLY-HTARINCLAWSPNNSMVATGSLD-----TCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSG 596 (609)
Q Consensus 523 ~~~~~~~~~~-h~~~i~~l~~s~d~~~l~s~s~D-----~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s 596 (609)
.......... ....-.++.+ ++++++.|+.+ ..+.+||..+..-..+.... ....-.++...++..++.||
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP-WKGVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCS-CCBSCCEEEEETTEEEEEEC
T ss_pred CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC-CCccceeEEEECCEEEEEeC
Confidence 7654321111 1111222223 67777777654 35788887653211111111 11111223333667777788
Q ss_pred CC-----CcEEEEEcc
Q 007283 597 ED-----ACVRVWRLT 607 (609)
Q Consensus 597 ~D-----~~i~~W~~~ 607 (609)
.+ ..+..+|+.
T Consensus 256 ~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 256 FQGVGRLGHILEYNTE 271 (306)
T ss_dssp BCSSSBCCEEEEEETT
T ss_pred cCCCeeeeeEEEEcCC
Confidence 54 345666654
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.71 E-value=4.2 Score=39.07 Aligned_cols=102 Identities=17% Similarity=0.132 Sum_probs=56.1
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEEecCCeeee-eE----EEecCCCceEEEEECCC----CCEEEEEeC-------CC
Q 007283 450 VTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTE-EA----VLEKHRGAVSVIRYSPD----VSMFASGDV-------NR 513 (609)
Q Consensus 450 ~~~~~~sp~g~~l~~gs~dg~i~iw~~~~~~~~~-~~----~~~~h~~~i~~v~~s~~----~~~l~s~s~-------d~ 513 (609)
...+++.|+|+++.++...|.|++++.. +.... .. +...-.+....|+++|+ +.+.++-.. ..
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 5778999999933445567999888743 22210 00 11112346789999995 555555332 23
Q ss_pred eEEEEEccCCc--e-----EEeeec---CCCCceEEEEECCCCcEEEEE
Q 007283 514 EAIVWDRVSRE--V-----KLKNML---YHTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 514 ~v~iwd~~~~~--~-----~~~~~~---~h~~~i~~l~~s~d~~~l~s~ 552 (609)
.|..|+..... . .+..+. .....-..++|.|||.++++-
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 45555543221 1 111111 111224679999999766654
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=90.69 E-value=10 Score=35.06 Aligned_cols=213 Identities=14% Similarity=0.108 Sum_probs=95.4
Q ss_pred CEEEEEeCCCCccccc--cccCCCCcEEEEECCCCCEEEEEeCC-----CcEEEEcCCCCceeeEEEeeccc---ceeEE
Q 007283 37 RSVIILDLSNPLQVSI--YGEHAYPATVARFSPNGEWIASADVS-----GTVRIWGAHNDHVLKKEFRVLSG---RIDDL 106 (609)
Q Consensus 37 ~~~~i~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~las~~~d-----~~i~vWd~~~~~~~~~~~~~~~~---~v~~~ 106 (609)
+.+.+||..+...... +...+..-..+.+ ++++++.|+.+ .++.++|..+.+- ..+..... ....+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQW--TSVANMRDRRSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEE--EEECCCSSCCBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCce--eeCCCCCccccceEEE
Confidence 4577888876653221 1111111222222 67777777654 3577888776541 11221111 12222
Q ss_pred EECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEE----ecCCccEEEEEEeeCCCeEEEEecCC-------CeEEEEeC
Q 007283 107 QWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEF----DGHSRRVLSCAFKPSRPFRIATCGED-------FLVNFYEG 175 (609)
Q Consensus 107 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~~i~t~~~d-------~~i~~~~~ 175 (609)
.+ +++.++..|.+.....-.++.++........ ......- +++. -++ .+++.||.+ ..+..||.
T Consensus 106 ~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~ 180 (302)
T 2xn4_A 106 VL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGG-LLYAVGGYDVASRQCLSTVECYNA 180 (302)
T ss_dssp EE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETT-EEEEECCEETTTTEECCCEEEEET
T ss_pred EE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECC-EEEEEeCCCCCCCccccEEEEEeC
Confidence 22 5555555553333323345555543322211 1111111 1121 233 356666543 23667787
Q ss_pred CCCceeee--ccCcccceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCCeE
Q 007283 176 PPFKFKLS--HRGHSNFVNCVRFSPDGSKFISVSSD-----KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGKQV 248 (609)
Q Consensus 176 ~~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~~l 248 (609)
.+.+.... +........++.+ ++.+++.|+.+ ..+.+||..+.+-. .+............+. -+++.+
T Consensus 181 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~--~~~~i~ 255 (302)
T 2xn4_A 181 TTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCA--VNGLLY 255 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEE--ETTEEE
T ss_pred CCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeEEE--ECCEEE
Confidence 66544322 2111111222222 56777777654 36888998765422 2211111111111222 256677
Q ss_pred EEEeCCC-----cEEEeecc
Q 007283 249 LTASADK-----SAKVWDIS 263 (609)
Q Consensus 249 ~s~s~d~-----~i~iwd~~ 263 (609)
+.|+.++ .+.+||+.
T Consensus 256 v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 256 VVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EECCBCSSSBCCCEEEEETT
T ss_pred EECCcCCCcccccEEEEcCC
Confidence 7776543 36777765
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.96 E-value=6.6 Score=36.48 Aligned_cols=145 Identities=19% Similarity=0.237 Sum_probs=72.1
Q ss_pred CCCEEEEEeCCC-----cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCC-------CeEEEEEccCCce
Q 007283 458 DGSEAIIGSQDG-----KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVN-------REAIVWDRVSREV 525 (609)
Q Consensus 458 ~g~~l~~gs~dg-----~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d-------~~v~iwd~~~~~~ 525 (609)
+++.++.|+.++ .+.+||..++.......+......-.++.+ ++++++.|+.+ ..+.+||..+...
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566667776553 467777766554322212111111122222 66777777643 3578899877665
Q ss_pred EEee-ecCCCCceEEEEECCCCcEEEEEeCCC-----eEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEeCCC
Q 007283 526 KLKN-MLYHTARINCLAWSPNNSMVATGSLDT-----CVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSGEDA 599 (609)
Q Consensus 526 ~~~~-~~~h~~~i~~l~~s~d~~~l~s~s~D~-----~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~D~ 599 (609)
.... +........++.+ ++++++.|+.++ .+.+||..+..-..+.... ....-.++...++..++-||.++
T Consensus 186 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~~~~i~v~GG~~~ 262 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN-MCRRNAGVCAVNGLLYVVGGDDG 262 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETTEEEEECCBCS
T ss_pred EECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-CccccCeEEEECCEEEEECCcCC
Confidence 4321 1111111222333 678888887653 6888887653211111000 11111123333667777777654
Q ss_pred -----cEEEEEcc
Q 007283 600 -----CVRVWRLT 607 (609)
Q Consensus 600 -----~i~~W~~~ 607 (609)
.+.++|+.
T Consensus 263 ~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 263 SCNLASVEYYNPT 275 (302)
T ss_dssp SSBCCCEEEEETT
T ss_pred CcccccEEEEcCC
Confidence 36666654
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.39 E-value=25 Score=40.24 Aligned_cols=215 Identities=15% Similarity=0.206 Sum_probs=120.6
Q ss_pred CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEE
Q 007283 36 GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRI 115 (609)
Q Consensus 36 ~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 115 (609)
+..++|.|+.++..+..- .=.--+...+|..+.||--. ..+++|++++++..++. + ...++|..=.|-.+. .|
T Consensus 47 ~~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks-~-~~~e~VvfWkWis~~-~l 119 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA-H-TMTDDVTFWKWISLN-TV 119 (1630)
T ss_pred CceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcc-c-ccCCCceEEEecCCC-ee
Confidence 358999999987765321 11123456899999888653 78999999998764442 2 234566666666554 44
Q ss_pred EEEECCCCcceEEEEEcCCC---CeeEEEecC----CccEEEEEEeeCCCeEEEEec------CCCeEEEEeCCCCceee
Q 007283 116 VACGDGKGKSLVRAFMWDSG---TNVGEFDGH----SRRVLSCAFKPSRPFRIATCG------EDFLVNFYEGPPFKFKL 182 (609)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~h----~~~v~~~~~~p~~~~~i~t~~------~d~~i~~~~~~~~~~~~ 182 (609)
+.+++. .++-|+.. .+...|..| ...|..-..+++..+.+++|= -.|.+.+|..+. +..+
T Consensus 120 ~lVT~~------aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ 192 (1630)
T 1xi4_A 120 ALVTDN------AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQ 192 (1630)
T ss_pred EEEcCC------eEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccch
Confidence 444432 25666642 233344444 345666677888887666652 236788887653 2334
Q ss_pred eccCcccceEEEEEc---CCCCEEEEEeC---CCcEEEEeCCCC-cccccc--------CcCCCCccceEEEEECCCCCe
Q 007283 183 SHRGHSNFVNCVRFS---PDGSKFISVSS---DKKGIIYDGKTA-DKIGEL--------SPEDGHKGSVYAVSWSPDGKQ 247 (609)
Q Consensus 183 ~~~~h~~~v~~l~~s---~dg~~l~s~~~---d~~i~iwd~~~~-~~~~~~--------~~~~~h~~~V~~l~~spd~~~ 247 (609)
.+.||......+... +....++.+.. .+.+.|-++... .....+ .+......-=.++..++.-..
T Consensus 193 ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 455665443333321 11223333322 256666665332 100011 001111222345666666667
Q ss_pred EEEEeCCCcEEEeeccc
Q 007283 248 VLTASADKSAKVWDISE 264 (609)
Q Consensus 248 l~s~s~d~~i~iwd~~~ 264 (609)
+...+.-|.+.++|+.+
T Consensus 273 iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLET 289 (1630)
T ss_pred EEEEecCceEEEEeccc
Confidence 77788889999999874
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.14 E-value=6.2 Score=36.83 Aligned_cols=145 Identities=18% Similarity=0.226 Sum_probs=71.8
Q ss_pred CCCEEEEEeCC-----CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCC-----CeEEEEEccCCceEE
Q 007283 458 DGSEAIIGSQD-----GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVN-----REAIVWDRVSREVKL 527 (609)
Q Consensus 458 ~g~~l~~gs~d-----g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 527 (609)
+++.++.|+.+ ..+.+||..++.......+......-.++.+ ++.+++.|+.+ ..+.+||..+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 45556665543 3577888766654322111111111222223 67777877764 458889987765532
Q ss_pred ee-ecCCCCceEEEEECCCCcEEEEEeCC-----CeEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEeCCC--
Q 007283 528 KN-MLYHTARINCLAWSPNNSMVATGSLD-----TCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSGEDA-- 599 (609)
Q Consensus 528 ~~-~~~h~~~i~~l~~s~d~~~l~s~s~D-----~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~D~-- 599 (609)
.. +......-.++.+ ++++++.|+.+ ..+.+||+....-..+.... ....-.++...+++.++-||.++
T Consensus 199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK-HRRSALGITVHQGRIYVLGGYDGHT 275 (308)
T ss_dssp CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCSSC
T ss_pred CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC-CCccceEEEEECCEEEEEcCcCCCc
Confidence 21 1111111223333 77888888765 45888887653211111001 11111233334667777777543
Q ss_pred ---cEEEEEcc
Q 007283 600 ---CVRVWRLT 607 (609)
Q Consensus 600 ---~i~~W~~~ 607 (609)
.+.++|+.
T Consensus 276 ~~~~v~~yd~~ 286 (308)
T 1zgk_A 276 FLDSVECYDPD 286 (308)
T ss_dssp BCCEEEEEETT
T ss_pred ccceEEEEcCC
Confidence 34555553
No 331
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.97 E-value=20 Score=35.78 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=60.9
Q ss_pred ceeEEeecCCCC--eEEEeCCCEEEEEeCCCCcc---cc----cc-cc----CCCCcEEEEECCC----CCEEEEEe--C
Q 007283 18 RGILISGHPKSN--SILYTNGRSVIILDLSNPLQ---VS----IY-GE----HAYPATVARFSPN----GEWIASAD--V 77 (609)
Q Consensus 18 ~~~~~~~~~~~~--~l~~~~~~~~~i~~~~~~~~---~~----~~-~~----h~~~v~~~~~sp~----g~~las~~--~ 77 (609)
.|..+++.|||. .+|.-..+.|++++...... +. .+ .+ ..+....++|+|+ |.+.++-+ .
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 567899999996 77777667888887532211 11 11 11 1345788999996 55444322 1
Q ss_pred CC--------cEEE--EcCCC----------CceeeEEE-eecccceeEEEECCCCCEEEEEECCC
Q 007283 78 SG--------TVRI--WGAHN----------DHVLKKEF-RVLSGRIDDLQWSPDGLRIVACGDGK 122 (609)
Q Consensus 78 d~--------~i~v--Wd~~~----------~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~~~~ 122 (609)
++ ..+| |.+.. .+.+.... ......-..|+|.|||...+++||..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 11 1333 44321 11222111 11234567899999999999999764
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.21 E-value=6 Score=36.93 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=64.4
Q ss_pred CcEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCC-----CeEEEEEccCCceEEee-ecCCCCceEEEEE
Q 007283 469 GKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVN-----REAIVWDRVSREVKLKN-MLYHTARINCLAW 542 (609)
Q Consensus 469 g~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~-~~~h~~~i~~l~~ 542 (609)
..+.+||..++.......+......-.++.+ ++++++.|+.+ ..+.+||..+.+..... +......-.++.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 4577787766554322212111111222222 67777777643 35788888776543221 1111111223333
Q ss_pred CCCCcEEEEEeCC-----CeEEEEEcCCCCCcceeEeccccCCeEEEEEcCCCeEEEEeCC-----CcEEEEEcc
Q 007283 543 SPNNSMVATGSLD-----TCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDEHSVVSSGED-----ACVRVWRLT 607 (609)
Q Consensus 543 s~d~~~l~s~s~D-----~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~D-----~~i~~W~~~ 607 (609)
++++++.|+.+ ..+.+||.....-..+.... ..+.-.++...++..++-||.+ ..+.++|+.
T Consensus 168 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 168 --NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN-TIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp --TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS-SCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred --CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC-CccccceEEEECCEEEEEeCCCCCCccceEEEEeCC
Confidence 67888877765 45788887643211111111 1111112223366677777765 346666654
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.37 E-value=18 Score=33.45 Aligned_cols=214 Identities=10% Similarity=-0.059 Sum_probs=95.4
Q ss_pred CEEEEEeCCCCccccc--cccCCCCcEEEEECCCCCEEEEEeCC----CcEEEEcCCCCceeeEEEeeccc---ceeEEE
Q 007283 37 RSVIILDLSNPLQVSI--YGEHAYPATVARFSPNGEWIASADVS----GTVRIWGAHNDHVLKKEFRVLSG---RIDDLQ 107 (609)
Q Consensus 37 ~~~~i~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~las~~~d----~~i~vWd~~~~~~~~~~~~~~~~---~v~~~~ 107 (609)
+.+.+||..+.+.... +...+..-.++. -++++++.|+.+ .++.++|..+.+- ..+..... ....+.
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~ 99 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSW--YSKLGPPTPRDSLAACA 99 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEE--EEEECCSSCCBSCEEEE
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeE--EECCCCCccccceeEEE
Confidence 4788888877654321 111122222333 367777777654 5677788776541 11221111 122222
Q ss_pred ECCCCCEEEEEECC-CCcceEEEEEcCCCCeeEEE----ecCCccEEEEEEeeCCCeEEEEecCC---------CeEEEE
Q 007283 108 WSPDGLRIVACGDG-KGKSLVRAFMWDSGTNVGEF----DGHSRRVLSCAFKPSRPFRIATCGED---------FLVNFY 173 (609)
Q Consensus 108 ~spdg~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~~i~t~~~d---------~~i~~~ 173 (609)
+ +++.++..|.+ .....-.++.++........ ......- ++.. -++ .+++.||.+ ..+..|
T Consensus 100 ~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~y 174 (306)
T 3ii7_A 100 A--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVE-ANG-LIYVCGGSLGNNVSGRVLNSCEVY 174 (306)
T ss_dssp E--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETT-EEEEECCEESCTTTCEECCCEEEE
T ss_pred E--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEE-ECC-EEEEECCCCCCCCcccccceEEEe
Confidence 2 55444444422 11111123333332221111 1111111 1111 233 346666532 336677
Q ss_pred eCCCCceeee--ccCcccceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCccccccCcCCCCccceEEEEECCCCC
Q 007283 174 EGPPFKFKLS--HRGHSNFVNCVRFSPDGSKFISVSSD-----KKGIIYDGKTADKIGELSPEDGHKGSVYAVSWSPDGK 246 (609)
Q Consensus 174 ~~~~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~h~~~V~~l~~spd~~ 246 (609)
|..+.+.... +......-..+.+ ++++++.|+.+ ..+.+||..+.+- ..+............+.+ +++
T Consensus 175 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~ 249 (306)
T 3ii7_A 175 DPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEW-KMVSPMPWKGVTVKCAAV--GSI 249 (306)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEE-EECCCCSCCBSCCEEEEE--TTE
T ss_pred CCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcE-EECCCCCCCccceeEEEE--CCE
Confidence 7766544332 1111111222222 66677777653 3578888876542 222111111111222333 667
Q ss_pred eEEEEeCC-----CcEEEeeccc
Q 007283 247 QVLTASAD-----KSAKVWDISE 264 (609)
Q Consensus 247 ~l~s~s~d-----~~i~iwd~~~ 264 (609)
+++.|+.+ ..+..||+..
T Consensus 250 i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 250 VYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EEEEECBCSSSBCCEEEEEETTT
T ss_pred EEEEeCcCCCeeeeeEEEEcCCC
Confidence 77777754 4577888764
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=84.72 E-value=19 Score=33.60 Aligned_cols=139 Identities=12% Similarity=0.164 Sum_probs=64.9
Q ss_pred EcCCCCEEEEEeC----CC-------cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCC-------CeEE
Q 007283 455 IAPDGSEAIIGSQ----DG-------KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVN-------REAI 516 (609)
Q Consensus 455 ~sp~g~~l~~gs~----dg-------~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d-------~~v~ 516 (609)
+..++..++.|+. ++ .+..||..+........+......-.++.+ ++.+++.|+.+ ..+.
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 3456777777763 12 166677665543322111111111122222 67777777754 3577
Q ss_pred EEEccCCceEEee-ecCCCCceEEEEECCCCcEEEEEeCC------CeEEEEEcCCCCCcceeEeccccCCeEEEEEcCC
Q 007283 517 VWDRVSREVKLKN-MLYHTARINCLAWSPNNSMVATGSLD------TCVIIYEIDKPASSRMTIKGAHLGGVYGLAFTDE 589 (609)
Q Consensus 517 iwd~~~~~~~~~~-~~~h~~~i~~l~~s~d~~~l~s~s~D------~~v~vw~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 589 (609)
+||..+.+..... +......-.++. .++++++.|+.+ ..+.+||..+..-..+.... ....-.++...++
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~ 207 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK-TPRSMFGVAIHKG 207 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEEETT
T ss_pred EEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC-CCcccceEEEECC
Confidence 8888776554221 110001111222 477777777642 35888887653211111111 1111122333366
Q ss_pred CeEEEEeCC
Q 007283 590 HSVVSSGED 598 (609)
Q Consensus 590 ~~l~s~s~D 598 (609)
..++.||.+
T Consensus 208 ~iyv~GG~~ 216 (318)
T 2woz_A 208 KIVIAGGVT 216 (318)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEcCcC
Confidence 777777754
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.36 E-value=16 Score=38.80 Aligned_cols=109 Identities=15% Similarity=0.204 Sum_probs=62.0
Q ss_pred CCCEEEEEeCCC------cEEEEEecCCeeeeeEEEecCCCceEEEEECCCCCEEEEEeCCC--eEEEEEccCCceEEee
Q 007283 458 DGSEAIIGSQDG------KLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNR--EAIVWDRVSREVKLKN 529 (609)
Q Consensus 458 ~g~~l~~gs~dg------~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~--~v~iwd~~~~~~~~~~ 529 (609)
+++.++.|+.++ .+.+||..++.......+...... .+...-.++.+++.|+.++ .+.+||..+.......
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 777888887543 477888776554322111111111 1222224888888888655 6899998877654322
Q ss_pred e----cCCCCceEEEEECCC-CcEEEEEeC--C-----CeEEEEEcCCCC
Q 007283 530 M----LYHTARINCLAWSPN-NSMVATGSL--D-----TCVIIYEIDKPA 567 (609)
Q Consensus 530 ~----~~h~~~i~~l~~s~d-~~~l~s~s~--D-----~~v~vw~~~~~~ 567 (609)
. ......-.++.+..+ +++++.|+. + ..+.+||+....
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1 111122234555555 777777766 2 458888886543
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.06 E-value=12 Score=37.89 Aligned_cols=75 Identities=11% Similarity=0.084 Sum_probs=50.8
Q ss_pred CceeEEEEcCCCCEEEEEeC-CCcEEEEEecCC------ee-eee--EEEe-cCCCceEEEEECCCCCEEEEEeCCCeEE
Q 007283 448 FPVTASAIAPDGSEAIIGSQ-DGKLRVYSIRGD------TL-TEE--AVLE-KHRGAVSVIRYSPDVSMFASGDVNREAI 516 (609)
Q Consensus 448 ~~~~~~~~sp~g~~l~~gs~-dg~i~iw~~~~~------~~-~~~--~~~~-~h~~~i~~v~~s~~~~~l~s~s~d~~v~ 516 (609)
.....+.++|||++++++++ +.++.+++++.- .+ ..+ ..-+ .-.-...-.+|.++|....|-..|..|-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 33455778999999877655 789999998631 11 000 0101 1123456788999997777888999999
Q ss_pred EEEccC
Q 007283 517 VWDRVS 522 (609)
Q Consensus 517 iwd~~~ 522 (609)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999754
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=81.95 E-value=17 Score=34.61 Aligned_cols=96 Identities=9% Similarity=0.056 Sum_probs=47.5
Q ss_pred CCCEEEEEeCC-CcEEEEEecC--CeeeeeEEEe-cCCCceEEEEECCCCCEEEEEeC-C---------CeEEEEEccCC
Q 007283 458 DGSEAIIGSQD-GKLRVYSIRG--DTLTEEAVLE-KHRGAVSVIRYSPDVSMFASGDV-N---------REAIVWDRVSR 523 (609)
Q Consensus 458 ~g~~l~~gs~d-g~i~iw~~~~--~~~~~~~~~~-~h~~~i~~v~~s~~~~~l~s~s~-d---------~~v~iwd~~~~ 523 (609)
++..++.|+.+ ..+..||... ........+. .....-.++.+ ++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666776544 4677777753 2222111111 01111122222 6777777776 2 45788998777
Q ss_pred ceEEeeecCCCCceEEEEECCCCcEEEEEeCC
Q 007283 524 EVKLKNMLYHTARINCLAWSPNNSMVATGSLD 555 (609)
Q Consensus 524 ~~~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D 555 (609)
+................+...++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 65432111111121111122478888888765
No 338
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=81.40 E-value=36 Score=31.99 Aligned_cols=214 Identities=16% Similarity=0.213 Sum_probs=126.9
Q ss_pred CEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEEE
Q 007283 37 RSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRIV 116 (609)
Q Consensus 37 ~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 116 (609)
..++|.|+.++.....-. =.-.+...+|..+.||--. ..+++|++++++..++. + ...+.|..=.|-.+. .|+
T Consensus 49 ~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks-~-~~~e~VvfWkWis~~-~L~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA-H-TMTDDVTFWKWISLN-TVA 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEE-E-ECSSCEEEEEECSSS-EEE
T ss_pred CEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcc-e-ecCCccEEEEecCCC-eEE
Confidence 589999999877653211 1123456899999988654 68999999999765542 2 235667776777665 555
Q ss_pred EEECCCCcceEEEEEcCC---CCeeEEEecCC----ccEEEEEEeeCCCeEEEEec--C----CCeEEEEeCCCCceeee
Q 007283 117 ACGDGKGKSLVRAFMWDS---GTNVGEFDGHS----RRVLSCAFKPSRPFRIATCG--E----DFLVNFYEGPPFKFKLS 183 (609)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~----~~v~~~~~~p~~~~~i~t~~--~----d~~i~~~~~~~~~~~~~ 183 (609)
.+.+.. ++-|+. ..+...|..|. ..|..-..+++....+++|= . .|.+++|..+. +..+.
T Consensus 122 lVT~ta------VyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ 194 (365)
T 2xzh_A 122 LVTDNA------VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQP 194 (365)
T ss_dssp EEESSE------EEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEE
T ss_pred EEcCCc------EEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccce
Confidence 554422 556643 24566676664 45666777888887666652 1 25678888764 44556
Q ss_pred ccCcccceEEEEEcCC---CCEEEEEeCC---CcEEEEeCCCC-cccccc--------CcCCCCccceEEEEECCCCCeE
Q 007283 184 HRGHSNFVNCVRFSPD---GSKFISVSSD---KKGIIYDGKTA-DKIGEL--------SPEDGHKGSVYAVSWSPDGKQV 248 (609)
Q Consensus 184 ~~~h~~~v~~l~~s~d---g~~l~s~~~d---~~i~iwd~~~~-~~~~~~--------~~~~~h~~~V~~l~~spd~~~l 248 (609)
+.||......+.+..+ ...++.+... +.+.|-++... .....+ .+.+...+-=.++..|+.-..+
T Consensus 195 ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygvi 274 (365)
T 2xzh_A 195 IEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVV 274 (365)
T ss_dssp ECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEE
T ss_pred eeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEE
Confidence 6777654433322211 1234444332 46777765332 111111 0111223333456666666678
Q ss_pred EEEeCCCcEEEeeccc
Q 007283 249 LTASADKSAKVWDISE 264 (609)
Q Consensus 249 ~s~s~d~~i~iwd~~~ 264 (609)
...+.-|.+.+||+..
T Consensus 275 yviTK~G~ihlyDleT 290 (365)
T 2xzh_A 275 FLITKYGYIHLYDLET 290 (365)
T ss_dssp EEEETTSEEEEEETTT
T ss_pred EEEeCCcEEEEEEccc
Confidence 8888899999999973
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.19 E-value=37 Score=36.01 Aligned_cols=109 Identities=14% Similarity=0.263 Sum_probs=61.0
Q ss_pred CCCCEEEEEeCC----CcEEEEEecCCeeeeeE-E-----EecCCCceEEEEECCCCCEEEEEeCCC------eEEEEEc
Q 007283 457 PDGSEAIIGSQD----GKLRVYSIRGDTLTEEA-V-----LEKHRGAVSVIRYSPDVSMFASGDVNR------EAIVWDR 520 (609)
Q Consensus 457 p~g~~l~~gs~d----g~i~iw~~~~~~~~~~~-~-----~~~h~~~i~~v~~s~~~~~l~s~s~d~------~v~iwd~ 520 (609)
.++..++.|+.+ ..+.+||..++...... . +......-.++.++.++..++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567788888754 46888888776543222 1 111111223333433788888887543 4778888
Q ss_pred cCCceEEeeecCCCCce-EEEEECCCCcEEEEEeCCC--eEEEEEcCCC
Q 007283 521 VSREVKLKNMLYHTARI-NCLAWSPNNSMVATGSLDT--CVIIYEIDKP 566 (609)
Q Consensus 521 ~~~~~~~~~~~~h~~~i-~~l~~s~d~~~l~s~s~D~--~v~vw~~~~~ 566 (609)
.+......... ..... .+++.-.++++++.|+.++ .+.+||..+.
T Consensus 476 ~t~~W~~~~~~-p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 476 KTREWSMIKSL-SHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp TTTEEEECCCC-SBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred CCCcEEECCCC-CCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence 77655322111 11111 1223324788888887665 6888887653
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=78.95 E-value=62 Score=35.72 Aligned_cols=33 Identities=6% Similarity=0.107 Sum_probs=28.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q 007283 493 AVSVIRYSPDVSMFASGDVNREAIVWDRVSREV 525 (609)
Q Consensus 493 ~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~ 525 (609)
.+.++...++..++.+-+.|+++|+|++.+++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 567888888999999999999999999887754
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=77.47 E-value=57 Score=32.04 Aligned_cols=215 Identities=16% Similarity=0.205 Sum_probs=129.7
Q ss_pred CCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeecccceeEEEECCCCCEE
Q 007283 36 GRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVLSGRIDDLQWSPDGLRI 115 (609)
Q Consensus 36 ~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 115 (609)
+..++|.|+.++..+..-. =.-.+...+|..+.||--. ..+++|++++++..++. +. ..+.|..=.|-.+. .|
T Consensus 47 ~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks-~~-~~e~VvfWkWis~~-~l 119 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKA-HT-MTDDVTFWKWISLN-TV 119 (494)
T ss_dssp CCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEE-EE-CSSCCCEEEEEETT-EE
T ss_pred CCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcc-ee-cCCCceEEEecCCC-eE
Confidence 3589999999877653211 1123556899999888654 78999999998765542 22 34566665665554 55
Q ss_pred EEEECCCCcceEEEEEcCC---CCeeEEEecCC----ccEEEEEEeeCCCeEEEEec------CCCeEEEEeCCCCceee
Q 007283 116 VACGDGKGKSLVRAFMWDS---GTNVGEFDGHS----RRVLSCAFKPSRPFRIATCG------EDFLVNFYEGPPFKFKL 182 (609)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~h~----~~v~~~~~~p~~~~~i~t~~------~d~~i~~~~~~~~~~~~ 182 (609)
+.+.+.. ++-|+. ..+...|..|. ..|..-..+++..+.+++|= -.|.+.+|..+. +..+
T Consensus 120 ~lVT~ta------VyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ 192 (494)
T 1bpo_A 120 ALVTDNA------VYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQ 192 (494)
T ss_dssp EEECSSE------EEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEE
T ss_pred EEEcCCe------eEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccc
Confidence 5554322 555653 24566676663 45777777888887666652 125678888764 3445
Q ss_pred eccCcccceEEEEEcCC---CCEEEEEeCC---CcEEEEeCCCC-ccccc--------cCcCCCCccceEEEEECCCCCe
Q 007283 183 SHRGHSNFVNCVRFSPD---GSKFISVSSD---KKGIIYDGKTA-DKIGE--------LSPEDGHKGSVYAVSWSPDGKQ 247 (609)
Q Consensus 183 ~~~~h~~~v~~l~~s~d---g~~l~s~~~d---~~i~iwd~~~~-~~~~~--------~~~~~~h~~~V~~l~~spd~~~ 247 (609)
.+.||......+.+..+ ...++.+... +.+.|-++... ..... +.+.+...+-=.++..++.-..
T Consensus 193 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygv 272 (494)
T 1bpo_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (494)
T ss_dssp EECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTE
T ss_pred hheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCE
Confidence 66778665444333211 1244555442 57777776432 00001 1111122333456777777778
Q ss_pred EEEEeCCCcEEEeeccc
Q 007283 248 VLTASADKSAKVWDISE 264 (609)
Q Consensus 248 l~s~s~d~~i~iwd~~~ 264 (609)
+...+.-|.+.++|+..
T Consensus 273 iyviTK~G~i~lyDleT 289 (494)
T 1bpo_A 273 VFLITKYGYIHLYDLET 289 (494)
T ss_dssp EEEEETTSEEEEEETTT
T ss_pred EEEEecCceEEEEeccc
Confidence 88888999999999974
No 342
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=77.43 E-value=14 Score=35.28 Aligned_cols=50 Identities=4% Similarity=-0.014 Sum_probs=26.4
Q ss_pred CeEEEEEccCCceEEeeecCCCCce-EEEEECCCCcEEEEEeCC------CeEEEEEc
Q 007283 513 REAIVWDRVSREVKLKNMLYHTARI-NCLAWSPNNSMVATGSLD------TCVIIYEI 563 (609)
Q Consensus 513 ~~v~iwd~~~~~~~~~~~~~h~~~i-~~l~~s~d~~~l~s~s~D------~~v~vw~~ 563 (609)
..+.+||..+.+............- .+++.. ++++++.|+.+ ..+.+|++
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEe
Confidence 5788999887765432211111111 122222 67777776642 35667776
No 343
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.73 E-value=36 Score=33.85 Aligned_cols=105 Identities=13% Similarity=0.174 Sum_probs=57.6
Q ss_pred eeEEEEcCCCC-EEEEEeCCCcEEEEEecCCeee-eeE-----EEec----CCCceEEEEECCC----CCEEEEEeC--C
Q 007283 450 VTASAIAPDGS-EAIIGSQDGKLRVYSIRGDTLT-EEA-----VLEK----HRGAVSVIRYSPD----VSMFASGDV--N 512 (609)
Q Consensus 450 ~~~~~~sp~g~-~l~~gs~dg~i~iw~~~~~~~~-~~~-----~~~~----h~~~i~~v~~s~~----~~~l~s~s~--d 512 (609)
...+++.|||. .+.++.+.|.|++++-...... ... ...+ -.+.+..|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 56789999996 4555678899999964322110 001 1111 1456788999997 444444332 1
Q ss_pred ----------CeEEEEEccC----------CceEEeee-cCCCCceEEEEECCCCcEEEEEeC
Q 007283 513 ----------REAIVWDRVS----------REVKLKNM-LYHTARINCLAWSPNNSMVATGSL 554 (609)
Q Consensus 513 ----------~~v~iwd~~~----------~~~~~~~~-~~h~~~i~~l~~s~d~~~l~s~s~ 554 (609)
..|.-|.+.. .+..+... ......-..|+|.|||++.++-+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1333344421 11111111 122334678999999987766544
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=75.50 E-value=90 Score=33.30 Aligned_cols=223 Identities=9% Similarity=0.035 Sum_probs=115.5
Q ss_pred eeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEe-
Q 007283 19 GILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFR- 97 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~- 97 (609)
...|...++|..-+.+. ..+..||..+..-..........|.++.. .+|.+.+.. .+ -+..++..+++.. .+.
T Consensus 65 i~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~lWigt-~~-Gl~~~~~~~~~~~--~~~~ 138 (758)
T 3ott_A 65 IYCGVIIDNTYLYMGTD-NGILVYNYRADRYEQPETDFPTDVRTMAL-QGDTLWLGA-LN-GLYTYQLQSRKLT--SFDT 138 (758)
T ss_dssp EEEEEEETTTEEEEEET-TEEEEEETTTTEECCCSCCCCSCEEEEEE-ETTEEEEEE-TT-EEEEEETTTCCEE--EECH
T ss_pred EEEEEEcCCCcEEEEeC-CCeEEEeCCCCEEECcccCCCceEEEEEe-cCCcEEEEc-CC-cceeEeCCCCeEE--Eecc
Confidence 34566666665444443 45788998664322211112235777655 467655543 34 5777787655422 221
Q ss_pred ----ecccceeEEEECCCCCEEEEEECCCCcceEEEEEcCCCCeeEEEe--c----CCccEEEEEEeeCCCeEEEEecCC
Q 007283 98 ----VLSGRIDDLQWSPDGLRIVACGDGKGKSLVRAFMWDSGTNVGEFD--G----HSRRVLSCAFKPSRPFRIATCGED 167 (609)
Q Consensus 98 ----~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----h~~~v~~~~~~p~~~~~i~t~~~d 167 (609)
.....|.++...++|...+.+.. + +. .++-..+. ...+. . ....|.++...+++..+.+ |..
T Consensus 139 ~~~~l~~~~i~~i~~d~~g~lWigt~~--G--l~-~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt~- 210 (758)
T 3ott_A 139 RRNGLPNNTIYSIIRTKDNQIYVGTYN--G--LC-RYIPSNGK-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GTE- 210 (758)
T ss_dssp HHHCCSCSCEEEEEECTTCCEEEEETT--E--EE-EEETTTTE-EEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EEE-
T ss_pred CCCCcCCCeEEEEEEcCCCCEEEEeCC--C--Hh-hCccCCCc-eEEecCCCccccccceeEEEEEECCCCEEEE-EEC-
Confidence 11245788888888887775431 1 11 22222221 11111 1 1224778877776553222 222
Q ss_pred CeEEEEeCCCCceeeeccCcccceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccCcC-----CCCccceEEEEEC
Q 007283 168 FLVNFYEGPPFKFKLSHRGHSNFVNCVRFSPDGSKFISVSSDKKGIIYDGKTADKIGELSPE-----DGHKGSVYAVSWS 242 (609)
Q Consensus 168 ~~i~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~h~~~V~~l~~s 242 (609)
+-+..++....+......-....|.++...++|.+.+ |+. +-+.+++..+++.. .+... .-....|.++...
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D 287 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFAD 287 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEEC
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEc
Confidence 3466677655443221111234588888888887544 554 45778887665421 11100 0123468999888
Q ss_pred CCCCeEEEEeCCCcEEEe
Q 007283 243 PDGKQVLTASADKSAKVW 260 (609)
Q Consensus 243 pd~~~l~s~s~d~~i~iw 260 (609)
.+|.+-+ |+..| +.+.
T Consensus 288 ~~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 288 QEHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp TTCCEEE-EESSS-EEEE
T ss_pred CCCCEEE-EeCCc-cccc
Confidence 8776544 33445 5444
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=69.61 E-value=70 Score=29.49 Aligned_cols=60 Identities=5% Similarity=0.046 Sum_probs=33.4
Q ss_pred EEEeCCCEEEEEeCCCCcccc-ccccCCCCcEEEEECCCCCEEEEEeC-----C--C----cEEEEcCCCCc
Q 007283 31 ILYTNGRSVIILDLSNPLQVS-IYGEHAYPATVARFSPNGEWIASADV-----S--G----TVRIWGAHNDH 90 (609)
Q Consensus 31 l~~~~~~~~~i~~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~las~~~-----d--~----~i~vWd~~~~~ 90 (609)
|+...|..+.+||..+++... .+........+.+...++++++.|+. . . .+.++|..+.+
T Consensus 7 l~~~GG~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (315)
T 4asc_A 7 IFMISEEGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE 78 (315)
T ss_dssp EEEEETTEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred EEEEcCCceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence 444455788899988776432 11111223344455568888777763 1 1 25666776643
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=67.90 E-value=76 Score=29.28 Aligned_cols=185 Identities=12% Similarity=0.011 Sum_probs=83.1
Q ss_pred eEEEeCCCEEEEEeCCCCccccc-cccCCCCcEEEEECCCCCEEEEEeC----CC-------cEEEEcCCCCceeeEEEe
Q 007283 30 SILYTNGRSVIILDLSNPLQVSI-YGEHAYPATVARFSPNGEWIASADV----SG-------TVRIWGAHNDHVLKKEFR 97 (609)
Q Consensus 30 ~l~~~~~~~~~i~~~~~~~~~~~-~~~h~~~v~~~~~sp~g~~las~~~----d~-------~i~vWd~~~~~~~~~~~~ 97 (609)
.|+..+|..+.+||..+.+.... +........+.+...++++++.|+. ++ .+.++|..+.+- ..+.
T Consensus 17 ~i~~~GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 94 (318)
T 2woz_A 17 LILLVNDTAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW--VGLP 94 (318)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE--EECS
T ss_pred hhhhccccceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE--EECC
Confidence 34445566788999887764331 1111122334445667888887763 12 155667665431 1111
Q ss_pred eccc---ceeEEEECCCCCEEEEEECC--CCcceEEEEEcCCCCeeEEEec-CCccEE-EEEEeeCCCeEEEEecCC---
Q 007283 98 VLSG---RIDDLQWSPDGLRIVACGDG--KGKSLVRAFMWDSGTNVGEFDG-HSRRVL-SCAFKPSRPFRIATCGED--- 167 (609)
Q Consensus 98 ~~~~---~v~~~~~spdg~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-h~~~v~-~~~~~p~~~~~i~t~~~d--- 167 (609)
.... ....+.+ +++.++..|.. .....-.++.++.......... -..+.. ..+...++ .+++.||.+
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~ 171 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNG-MIYCLGGKTDDK 171 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETT-EEEEECCEESSS
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECC-EEEEEcCCCCCC
Confidence 1111 1122223 55555555532 2222334555554332222111 011111 11112344 356666642
Q ss_pred ---CeEEEEeCCCCceeee--ccCcccceEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCc
Q 007283 168 ---FLVNFYEGPPFKFKLS--HRGHSNFVNCVRFSPDGSKFISVSSD-----KKGIIYDGKTAD 221 (609)
Q Consensus 168 ---~~i~~~~~~~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~d-----~~i~iwd~~~~~ 221 (609)
..+..||..+.+.... +........++.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 172 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2467778766554332 1111111222222 66777777654 246678877654
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=64.84 E-value=12 Score=35.40 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=52.1
Q ss_pred EEEEEeCCCcEEEEEecCCeeeeeEEEecCCCceEEEEE--C-CCCCEEEEE-eCCCeEEEEEccCCceEEeeecC---C
Q 007283 461 EAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRY--S-PDVSMFASG-DVNREAIVWDRVSREVKLKNMLY---H 533 (609)
Q Consensus 461 ~l~~gs~dg~i~iw~~~~~~~~~~~~~~~h~~~i~~v~~--s-~~~~~l~s~-s~d~~v~iwd~~~~~~~~~~~~~---h 533 (609)
.+++++.||.|+-+|..++...-..... ...++....- . .++..++.. ..||.+..++..++..+...-.. .
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 5777888888888887766643222111 1112221110 0 133444443 58999999997766443321110 1
Q ss_pred CCceEE---EEE-----CCCCcEEEEEeCCCeEEEEEcCCC
Q 007283 534 TARINC---LAW-----SPNNSMVATGSLDTCVIIYEIDKP 566 (609)
Q Consensus 534 ~~~i~~---l~~-----s~d~~~l~s~s~D~~v~vw~~~~~ 566 (609)
..++.. ..+ +..+..+.+|+.++.+...|+.++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC
Confidence 112211 000 013445677777777777776553
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.44 E-value=21 Score=36.78 Aligned_cols=56 Identities=13% Similarity=0.005 Sum_probs=41.1
Q ss_pred eeEEeecCCCCeEEEeCC-------------CEEEEEeCCCCccccccccCCC-CcEEEEECCCCCEEEE
Q 007283 19 GILISGHPKSNSILYTNG-------------RSVIILDLSNPLQVSIYGEHAY-PATVARFSPNGEWIAS 74 (609)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~-------------~~~~i~~~~~~~~~~~~~~h~~-~v~~~~~sp~g~~las 74 (609)
|=+|.++|+|+.++...+ +.+.+.+..+++..+++.++.+ .++.++|+|||+.|..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 348999999997776653 2456666666777666766654 5899999999987754
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.97 E-value=38 Score=34.43 Aligned_cols=72 Identities=8% Similarity=-0.027 Sum_probs=49.4
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEEccCCce-----------EEeeecCCCCceEEEEECCCCcEEEEEeCCCeEEEE
Q 007283 494 VSVIRYSPDVSMFASGD-VNREAIVWDRVSREV-----------KLKNMLYHTARINCLAWSPNNSMVATGSLDTCVIIY 561 (609)
Q Consensus 494 i~~v~~s~~~~~l~s~s-~d~~v~iwd~~~~~~-----------~~~~~~~h~~~i~~l~~s~d~~~l~s~s~D~~v~vw 561 (609)
...+.++|||++++.++ .+.++.++|+..-.. .+.....---.....+|.++|.-..|--.|..|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 34577899999887765 688899999763110 000011123456789999999655566699999999
Q ss_pred EcCC
Q 007283 562 EIDK 565 (609)
Q Consensus 562 ~~~~ 565 (609)
+++.
T Consensus 405 ni~~ 408 (638)
T 3sbq_A 405 NMEE 408 (638)
T ss_dssp EHHH
T ss_pred eccH
Confidence 9863
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.55 E-value=38 Score=34.81 Aligned_cols=60 Identities=10% Similarity=0.175 Sum_probs=38.6
Q ss_pred ceEEEEECCCCCEEEEEeCC------------CeEEEEEccCCceEEeeecCCCCceEEEEECCCCcEEEEE
Q 007283 493 AVSVIRYSPDVSMFASGDVN------------REAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 493 ~i~~v~~s~~~~~l~s~s~d------------~~v~iwd~~~~~~~~~~~~~h~~~i~~l~~s~d~~~l~s~ 552 (609)
..-.|.|+|+|.+++.-+.+ ..+.+.+..+++...-....-..+++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34668899999877764432 2345555544544322222345789999999999988755
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.23 E-value=39 Score=34.40 Aligned_cols=58 Identities=12% Similarity=0.027 Sum_probs=40.1
Q ss_pred ceeEEeecCCCCeEEEeCC-------------CEEEEEeCCCCccccccccCC-CCcEEEEECCCCCEEEEE
Q 007283 18 RGILISGHPKSNSILYTNG-------------RSVIILDLSNPLQVSIYGEHA-YPATVARFSPNGEWIASA 75 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~-------------~~~~i~~~~~~~~~~~~~~h~-~~v~~~~~sp~g~~las~ 75 (609)
.|-.|.++++|++.+...+ +.++.++..+++....+.+.. ..++.++||||++.|..+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4568999999986663432 256667766666655554432 458999999999988654
No 352
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=53.36 E-value=2.2e+02 Score=29.91 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=25.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q 007283 493 AVSVIRYSPDVSMFASGDVNREAIVWDRVSREV 525 (609)
Q Consensus 493 ~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~ 525 (609)
.|.++.+ +..++++-+.|+++|+||+.+.+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCce
Confidence 4666555 478999999999999999988764
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.84 E-value=73 Score=32.45 Aligned_cols=60 Identities=13% Similarity=0.243 Sum_probs=39.3
Q ss_pred CceEEEEECCCCCEEEEEeC------------CCeEEEEEccCCceEEeeecC-CCCceEEEEECCCCcEEEEE
Q 007283 492 GAVSVIRYSPDVSMFASGDV------------NREAIVWDRVSREVKLKNMLY-HTARINCLAWSPNNSMVATG 552 (609)
Q Consensus 492 ~~i~~v~~s~~~~~l~s~s~------------d~~v~iwd~~~~~~~~~~~~~-h~~~i~~l~~s~d~~~l~s~ 552 (609)
.....|.|.++|.+.+.-+. ...+..++..+++.... +.. ....++.++||||++.|..+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~f-l~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF-MVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEE-EECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEE-EeCCCCccccCCEECCCCCEEEEE
Confidence 45678999999988773322 12566666555554322 222 24679999999999988765
No 354
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=50.99 E-value=1.5e+02 Score=27.16 Aligned_cols=102 Identities=21% Similarity=0.198 Sum_probs=49.7
Q ss_pred CeEEEEecCC--------CeEEEEeCCCCceeee--ccCcccceEEEEEcCCCCEEEEEeC-C-----CcEEEEeCCCCc
Q 007283 158 PFRIATCGED--------FLVNFYEGPPFKFKLS--HRGHSNFVNCVRFSPDGSKFISVSS-D-----KKGIIYDGKTAD 221 (609)
Q Consensus 158 ~~~i~t~~~d--------~~i~~~~~~~~~~~~~--~~~h~~~v~~l~~s~dg~~l~s~~~-d-----~~i~iwd~~~~~ 221 (609)
..+++.||.+ ..+..||..+.+.... +......-.++. -+++.++.|+. + ..+.+||..+.+
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 3456667632 2466777765544322 111111112222 35667777765 2 457888877654
Q ss_pred cccccCcCCCCccceEEEEECCCCCeEEEEeCCC-----cEEEeeccc
Q 007283 222 KIGELSPEDGHKGSVYAVSWSPDGKQVLTASADK-----SAKVWDISE 264 (609)
Q Consensus 222 ~~~~~~~~~~h~~~V~~l~~spd~~~l~s~s~d~-----~i~iwd~~~ 264 (609)
-. .+.........-..+.+ ++++++.|+.++ .+.+||+..
T Consensus 177 W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 177 WK-ELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp EE-ECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred EE-ECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 21 22111111111112222 667777777654 467788763
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.12 E-value=82 Score=34.77 Aligned_cols=34 Identities=3% Similarity=0.053 Sum_probs=29.3
Q ss_pred CcEEEEECCCCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 59 PATVARFSPNGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 59 ~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
.+.+++..++..++.+-+.|+++|+|++.+++++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeE
Confidence 3577778889999999999999999999988754
No 356
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.41 E-value=1.1e+02 Score=32.24 Aligned_cols=82 Identities=12% Similarity=0.202 Sum_probs=47.0
Q ss_pred ecCCCccCcCceeEEeecCCCCeEEEeC-CCEEEEEeCCCCcc-c-------------cccccC---CCC--cEEEEECC
Q 007283 8 YTCVPSTERGRGILISGHPKSNSILYTN-GRSVIILDLSNPLQ-V-------------SIYGEH---AYP--ATVARFSP 67 (609)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~i~~~~~~~~-~-------------~~~~~h---~~~--v~~~~~sp 67 (609)
+.+-+++-|-.+...+.+++. .+|+-. |+-+.+-.-..... . ..+.+. +.+ |.++.+
T Consensus 153 ~~Py~F~~R~Ph~L~avs~~~-liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~-- 229 (729)
T 3f7f_A 153 QNPYDFTVRVPHFLFYVSPQF-SVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF-- 229 (729)
T ss_dssp CCCSCTTTSCEEEEEECSSSB-EEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE--
T ss_pred ecCCcccccCCcEEEEECCCe-EEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc--
Confidence 444566667666677777654 666654 44444432211110 0 012211 122 444444
Q ss_pred CCCEEEEEeCCCcEEEEcCCCCcee
Q 007283 68 NGEWIASADVSGTVRIWGAHNDHVL 92 (609)
Q Consensus 68 ~g~~las~~~d~~i~vWd~~~~~~~ 92 (609)
+.++|++-+.|+++|+|++.+++++
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv 254 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLI 254 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceE
Confidence 4789999999999999999987643
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=39.85 E-value=3.6e+02 Score=28.42 Aligned_cols=198 Identities=10% Similarity=0.073 Sum_probs=95.0
Q ss_pred cEEEE-ECCCCCEEEE-Ee----CCCcEEEEcCCCCceeeEEEe-eccc------ceeEEEECCCCCEEEEEECCCC---
Q 007283 60 ATVAR-FSPNGEWIAS-AD----VSGTVRIWGAHNDHVLKKEFR-VLSG------RIDDLQWSPDGLRIVACGDGKG--- 123 (609)
Q Consensus 60 v~~~~-~sp~g~~las-~~----~d~~i~vWd~~~~~~~~~~~~-~~~~------~v~~~~~spdg~~l~~~~~~~~--- 123 (609)
...+. ++|||+++|- -| ...++|++|+.+++.+.-.+. ..+. ....++|-.+...+++...+.+
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34455 8999999873 22 234799999999865432222 0000 1234577633333333211110
Q ss_pred --cceEEEEEcCCCCee----EEEecCCccE-EEEEEeeCCCe----EEEEecCC---CeEEEEeCC--CCceeeeccCc
Q 007283 124 --KSLVRAFMWDSGTNV----GEFDGHSRRV-LSCAFKPSRPF----RIATCGED---FLVNFYEGP--PFKFKLSHRGH 187 (609)
Q Consensus 124 --~~~~~~~~~~~~~~~----~~~~~h~~~v-~~~~~~p~~~~----~i~t~~~d---~~i~~~~~~--~~~~~~~~~~h 187 (609)
..--+++.|..|+.+ ..+.+....+ .+...++++.+ .+++.+.+ ..+.+.+.. .++........
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 011356777766542 2354443333 34455666653 34443322 223333432 23322211111
Q ss_pred ccceEEEEEcCCCCEEEEE----------eCCCcEEEEeCCCCc-------cccc-cCcCCCCccceEEEEECCCCCeEE
Q 007283 188 SNFVNCVRFSPDGSKFISV----------SSDKKGIIYDGKTAD-------KIGE-LSPEDGHKGSVYAVSWSPDGKQVL 249 (609)
Q Consensus 188 ~~~v~~l~~s~dg~~l~s~----------~~d~~i~iwd~~~~~-------~~~~-~~~~~~h~~~V~~l~~spd~~~l~ 249 (609)
... +..++++.+++.. ...+.+...+..++. .... +. ......+..+.+.++ .+++
T Consensus 291 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 291 DAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT--PTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp TCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC--CCTTEEEEEEEECSS-CEEE
T ss_pred cce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC--CCCCCeEEEEEEECC-EEEE
Confidence 111 2233455444422 245678888876532 1222 21 123456888899876 5666
Q ss_pred EEeCCCc--EEEeecc
Q 007283 250 TASADKS--AKVWDIS 263 (609)
Q Consensus 250 s~s~d~~--i~iwd~~ 263 (609)
+...++. +.++++.
T Consensus 365 ~~~~~~~~~l~~~~~~ 380 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLE 380 (711)
T ss_dssp EEEETTEEEEEEECEE
T ss_pred EEEECCEEEEEEEECC
Confidence 7666765 5566654
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=34.01 E-value=61 Score=36.66 Aligned_cols=34 Identities=3% Similarity=0.064 Sum_probs=27.9
Q ss_pred cEEEEECCCCCEEEEEeCCCcEEEEcCCCCceee
Q 007283 60 ATVARFSPNGEWIASADVSGTVRIWGAHNDHVLK 93 (609)
Q Consensus 60 v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~ 93 (609)
+.+++..++.++|.+-+.|+++|||++.+++++.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 4455667888999999999999999999987543
No 359
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=32.32 E-value=1.1e+02 Score=28.73 Aligned_cols=61 Identities=8% Similarity=0.002 Sum_probs=31.8
Q ss_pred EEEEEeCCCeEEEEEccCCceEEeeecCCCCceEEEE---ECCCCcEEEEE-eCCCeEEEEEcCC
Q 007283 505 MFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLA---WSPNNSMVATG-SLDTCVIIYEIDK 565 (609)
Q Consensus 505 ~l~s~s~d~~v~iwd~~~~~~~~~~~~~h~~~i~~l~---~s~d~~~l~s~-s~D~~v~vw~~~~ 565 (609)
++..++.||.++-.|..+++...+.......++.... ...++..++.. +.||.|..++...
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC
Confidence 5667788888888887777665543221112221111 00122333333 5677777777543
No 360
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=30.53 E-value=1.7e+02 Score=21.95 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=45.4
Q ss_pred eEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 20 ILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
..+.+..||+..+|..+. +|...+... ..-..+.+..+|++++... ++.+-+|...+.. ..
T Consensus 22 ~~L~~q~dGnLvl~~~~~---vW~snt~~~--------~~~~~l~l~~dGNLVl~~~-~~~~~vW~S~t~~-------~~ 82 (111)
T 3mez_A 22 AAFVMQGDCNLVLYNEAG---GFQSNTHGR--------GVDCTLRLNNRGQLEIHSA-NSNTPVWVYPRSV-------NT 82 (111)
T ss_dssp EEEEECTTSCEEEECSSC---CEECCCTTS--------CSSCEEEECTTSCEEEECS-SCSSCSEEESSSC-------CC
T ss_pred EEEEEccCCeEEEECCCC---EEECCcccC--------CcCEEEEEcCCCcEEEEeC-CCCEEEEEecccc-------CC
Confidence 467777888887776544 787644211 1123567899999888643 3444478654310 01
Q ss_pred ccceeEEEECCCCCEEEE
Q 007283 100 SGRIDDLQWSPDGLRIVA 117 (609)
Q Consensus 100 ~~~v~~~~~spdg~~l~~ 117 (609)
......+.+-+||...+-
T Consensus 83 ~~~~~~l~Lq~dGNlvly 100 (111)
T 3mez_A 83 VRGNYAATLGPDQHVTIY 100 (111)
T ss_dssp CSSCCEEEECTTSCEEEE
T ss_pred CCcCEEEEECCCCeEEEe
Confidence 112345667777765443
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.52 E-value=1.8e+02 Score=32.91 Aligned_cols=33 Identities=6% Similarity=0.107 Sum_probs=27.2
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccCCce
Q 007283 493 AVSVIRYSPDVSMFASGDVNREAIVWDRVSREV 525 (609)
Q Consensus 493 ~i~~v~~s~~~~~l~s~s~d~~v~iwd~~~~~~ 525 (609)
.+.+++..++..++.+-+.|+++|+||+.+++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 445566678889999999999999999887754
No 362
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=27.72 E-value=2e+02 Score=21.70 Aligned_cols=78 Identities=13% Similarity=0.078 Sum_probs=46.3
Q ss_pred eEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEEeCCCcEEEEcCCCCceeeEEEeec
Q 007283 20 ILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASADVSGTVRIWGAHNDHVLKKEFRVL 99 (609)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~~~d~~i~vWd~~~~~~~~~~~~~~ 99 (609)
..+.+..||+..+|..+..-.+|...+.. .+.-..+.+..+|++++... ++.+ +|...+...
T Consensus 26 ~~L~~q~dGNLvL~~~~~~~~vWssnt~~--------~~~~~~l~l~~dGNLVl~d~-~~~~-iW~S~t~~~-------- 87 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKTNIVWESGTSG--------RGQHCFMRLGHSGELDITDD-RLNT-VFVSNTVGQ-------- 87 (113)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECCCTT--------SCSSCEEEECTTSCEEEECT-TSCE-EEECSCCCS--------
T ss_pred EEEEEcCCCEEEEEECCCCEEEEECCccc--------CCcCEEEEEeCCCcEEEECC-CCCE-EEECCCcCC--------
Confidence 46777788988888653234578764421 11224578999999988643 4554 898655210
Q ss_pred ccceeEEEECCCCCEEE
Q 007283 100 SGRIDDLQWSPDGLRIV 116 (609)
Q Consensus 100 ~~~v~~~~~spdg~~l~ 116 (609)
.....+.+-+||...+
T Consensus 88 -~~~~~~~L~~dGnlvl 103 (113)
T 3mez_B 88 -EGDYVLILQINGQAVV 103 (113)
T ss_dssp -SSCCEEEECTTSCEEE
T ss_pred -CCCEEEEEcCCceEEE
Confidence 1123455667775444
No 363
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=26.18 E-value=3.6e+02 Score=24.25 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=32.1
Q ss_pred CCeEEEEEecCCCCEEEEEecCCcEEEEecCcc-ccceeccccccceeEeeeeCCcEEEEeccceEEEEecc
Q 007283 325 KNVTALTVLNIDPKVILSSSYDGLIVKWIQGIG-YGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQ 395 (609)
Q Consensus 325 ~~v~~~~~~~~~~~~~~t~s~dg~i~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 395 (609)
..|..++.-. ...++- . ||.+..|=.+.. +.. ........+..++.-....+... +++++.|...
T Consensus 24 ~~i~~ia~G~--~h~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n 89 (282)
T 3qhy_B 24 SGVDAIAGGY--FHGLAL-K-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGN 89 (282)
T ss_dssp SSCCEEEECS--SEEEEE-E-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECC
T ss_pred CCCcEEEeCC--CeEEEE-E-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCC
Confidence 3566666432 123333 4 999999944321 111 11112234555555444333334 7888888643
No 364
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=25.41 E-value=3.1e+02 Score=28.62 Aligned_cols=62 Identities=26% Similarity=0.355 Sum_probs=38.9
Q ss_pred cCCCC--EEEEEeCCCcE-EEEEecCCe-------eeeeEEEecCCCceEEEEECCCCCEEEEEeCCCeEEE
Q 007283 456 APDGS--EAIIGSQDGKL-RVYSIRGDT-------LTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIV 517 (609)
Q Consensus 456 sp~g~--~l~~gs~dg~i-~iw~~~~~~-------~~~~~~~~~h~~~i~~v~~s~~~~~l~s~s~d~~v~i 517 (609)
.++|+ .+..|+.+|.| ++....... +..+...-....+|..+.++++..+|.+++.++-+++
T Consensus 424 ~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 424 AEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp CSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 34554 47789999987 454432221 1111112234568999999999999999888776654
No 365
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=23.88 E-value=1.1e+02 Score=23.14 Aligned_cols=52 Identities=4% Similarity=-0.033 Sum_probs=28.1
Q ss_pred ceeEEeecCCCCeEEEeCCCEEEEEeCCCCccccccccCCCCcEEEEECCCCCEEEEE
Q 007283 18 RGILISGHPKSNSILYTNGRSVIILDLSNPLQVSIYGEHAYPATVARFSPNGEWIASA 75 (609)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~las~ 75 (609)
.++.+.+.++|+..+|...+...+|...+. .........+.+.+||++++-.
T Consensus 50 ~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~------~~~~~~~~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 50 VDCTLRLNNRGQLEIHSANSNTPVWVYPRS------VNTVRGNYAATLGPDQHVTIYG 101 (111)
T ss_dssp SSCEEEECTTSCEEEECSSCSSCSEEESSS------CCCCSSCCEEEECTTSCEEEEC
T ss_pred cCEEEEEcCCCcEEEEeCCCCEEEEEeccc------cCCCCcCEEEEECCCCeEEEec
Confidence 346778888888777754333346643221 1111123445666777766653
Done!