Query 007286
Match_columns 609
No_of_seqs 658 out of 5438
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 21:57:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007286.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007286hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 2E-55 6.8E-60 445.3 19.6 259 284-563 26-304 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 5.5E-55 1.9E-59 440.1 16.4 259 283-563 12-287 (299)
3 4aoj_A High affinity nerve gro 100.0 2.7E-54 9.2E-59 441.1 19.9 258 284-563 41-317 (329)
4 3omv_A RAF proto-oncogene seri 100.0 1.5E-53 5.1E-58 429.8 21.7 262 280-563 32-298 (307)
5 4ase_A Vascular endothelial gr 100.0 1.9E-53 6.6E-58 438.3 15.1 270 274-563 54-345 (353)
6 4b9d_A Serine/threonine-protei 100.0 2.2E-52 7.4E-57 427.2 16.5 251 284-558 24-276 (350)
7 3uim_A Brassinosteroid insensi 100.0 2.1E-51 7.2E-56 422.5 21.4 320 259-578 5-324 (326)
8 3hmm_A TGF-beta receptor type- 100.0 1.4E-51 4.8E-56 417.9 19.3 265 284-563 3-295 (303)
9 4fih_A Serine/threonine-protei 100.0 6.8E-51 2.3E-55 415.5 23.1 249 284-558 74-323 (346)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.3E-51 7.9E-56 417.8 18.8 250 284-562 58-313 (336)
11 3fpq_A Serine/threonine-protei 100.0 2.3E-51 7.8E-56 410.9 18.0 247 287-558 29-282 (290)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 2E-51 6.8E-56 413.2 14.9 248 284-557 32-283 (311)
13 4fie_A Serine/threonine-protei 100.0 1.1E-49 3.8E-54 416.4 24.8 250 283-558 150-400 (423)
14 3hyh_A Carbon catabolite-derep 100.0 6.4E-50 2.2E-54 396.9 21.7 246 284-558 13-262 (275)
15 3ubd_A Ribosomal protein S6 ki 100.0 1.9E-50 6.4E-55 406.2 9.8 243 284-553 24-271 (304)
16 4g31_A Eukaryotic translation 100.0 1.6E-49 5.5E-54 400.9 15.8 251 284-558 5-279 (299)
17 2qkw_B Protein kinase; three-h 100.0 7.5E-46 2.6E-50 380.4 23.0 283 275-563 30-313 (321)
18 4b99_A Mitogen-activated prote 100.0 8.4E-46 2.9E-50 387.9 23.3 262 284-558 54-344 (398)
19 4f9c_A Cell division cycle 7-r 100.0 4E-46 1.4E-50 386.2 19.7 198 282-492 19-250 (361)
20 3v5w_A G-protein coupled recep 100.0 1.2E-44 4.3E-49 394.8 18.4 250 283-558 188-449 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 2.5E-44 8.4E-49 395.0 20.3 252 283-558 156-410 (573)
22 2psq_A Fibroblast growth facto 100.0 1.1E-43 3.9E-48 371.2 21.3 261 282-563 79-362 (370)
23 2nru_A Interleukin-1 receptor- 100.0 2.5E-42 8.6E-47 351.7 29.6 283 270-563 11-304 (307)
24 3s95_A LIMK-1, LIM domain kina 100.0 8E-43 2.7E-47 356.0 24.0 259 283-564 9-281 (310)
25 3kul_A Ephrin type-A receptor 100.0 2.2E-43 7.6E-48 362.5 18.5 257 283-563 48-311 (325)
26 3cbl_A C-FES, proto-oncogene t 100.0 5.8E-44 2E-48 374.6 13.4 259 281-563 111-372 (377)
27 3p86_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 361.1 15.8 264 277-563 30-296 (309)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.9E-43 2.4E-47 348.6 20.0 257 282-564 6-263 (268)
29 3zgw_A Maternal embryonic leuc 100.0 1E-42 3.5E-47 359.8 21.9 251 282-558 8-260 (347)
30 2qol_A Ephrin receptor; recept 100.0 2.3E-43 7.7E-48 369.2 17.0 258 282-563 43-307 (373)
31 1rjb_A FL cytokine receptor; k 100.0 2.4E-43 8.4E-48 365.2 16.9 266 279-564 40-333 (344)
32 3vhe_A Vascular endothelial gr 100.0 1.8E-43 6.1E-48 368.4 15.4 271 273-563 11-353 (359)
33 4hcu_A Tyrosine-protein kinase 100.0 4.2E-43 1.4E-47 350.4 17.4 256 282-563 8-264 (269)
34 3fxz_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47 352.1 20.8 250 283-558 19-269 (297)
35 3tt0_A Basic fibroblast growth 100.0 7.6E-43 2.6E-47 366.8 19.6 262 281-563 66-350 (382)
36 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-42 3.9E-47 377.4 20.5 259 281-564 217-477 (495)
37 3l9p_A Anaplastic lymphoma kin 100.0 5.2E-43 1.8E-47 365.9 17.1 260 283-563 70-343 (367)
38 4eqm_A Protein kinase; transfe 100.0 1.6E-42 5.3E-47 351.1 19.1 261 283-564 10-274 (294)
39 1luf_A Muscle-specific tyrosin 100.0 5.1E-43 1.7E-47 362.5 15.8 266 278-564 41-334 (343)
40 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-42 5.1E-47 354.3 18.9 262 281-563 20-309 (314)
41 4euu_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46 349.1 25.0 274 283-563 8-307 (319)
42 3poz_A Epidermal growth factor 100.0 1.1E-42 3.6E-47 357.9 17.4 256 283-563 14-276 (327)
43 2c30_A Serine/threonine-protei 100.0 1.9E-41 6.5E-46 347.5 26.5 262 272-559 23-295 (321)
44 1qcf_A Haematopoetic cell kina 100.0 5.6E-43 1.9E-47 376.1 15.6 259 280-564 184-443 (454)
45 3q4u_A Activin receptor type-1 100.0 2.5E-42 8.6E-47 350.4 19.5 260 283-563 7-300 (301)
46 3gen_A Tyrosine-protein kinase 100.0 1.5E-42 5.1E-47 349.1 17.6 257 281-563 21-278 (283)
47 1mp8_A Focal adhesion kinase 1 100.0 1.7E-42 5.9E-47 348.4 18.0 258 281-563 12-274 (281)
48 3fe3_A MAP/microtubule affinit 100.0 5.9E-42 2E-46 352.0 21.9 250 282-559 13-265 (328)
49 3tki_A Serine/threonine-protei 100.0 2.1E-42 7.2E-47 354.9 18.3 254 283-559 6-262 (323)
50 3soc_A Activin receptor type-2 100.0 2.2E-42 7.5E-47 354.7 18.3 269 282-563 22-316 (322)
51 1t46_A HOMO sapiens V-KIT hard 100.0 3.7E-42 1.2E-46 351.3 18.6 263 281-563 20-305 (313)
52 2izr_A Casein kinase I isoform 100.0 2.4E-41 8.2E-46 348.2 24.5 259 283-563 8-279 (330)
53 3kfa_A Tyrosine-protein kinase 100.0 1.2E-42 4.2E-47 350.6 14.3 260 279-563 8-269 (288)
54 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.4E-42 8.4E-47 370.8 17.2 258 281-564 181-439 (452)
55 3niz_A Rhodanese family protei 100.0 6.9E-42 2.4E-46 349.2 19.2 265 282-558 19-300 (311)
56 2i1m_A Macrophage colony-stimu 100.0 9.7E-43 3.3E-47 359.0 12.7 265 279-563 41-324 (333)
57 1k9a_A Carboxyl-terminal SRC k 100.0 1E-41 3.5E-46 365.8 20.9 252 281-563 190-443 (450)
58 1csn_A Casein kinase-1; phosph 100.0 3.5E-41 1.2E-45 341.5 23.6 261 282-563 8-281 (298)
59 2pvf_A Fibroblast growth facto 100.0 6.1E-42 2.1E-46 353.3 18.4 262 281-563 32-316 (334)
60 3qd2_B Eukaryotic translation 100.0 7.2E-42 2.5E-46 351.9 18.7 252 283-558 5-325 (332)
61 3ugc_A Tyrosine-protein kinase 100.0 3.6E-42 1.2E-46 348.5 15.9 266 282-563 8-289 (295)
62 4f0f_A Serine/threonine-protei 100.0 2.2E-41 7.6E-46 341.2 21.5 254 282-562 17-286 (287)
63 2yab_A Death-associated protei 100.0 1.3E-41 4.4E-46 353.7 19.9 252 283-558 11-272 (361)
64 3dtc_A Mitogen-activated prote 100.0 1E-41 3.4E-46 340.7 18.3 254 283-562 6-270 (271)
65 3lb7_A RAF proto-oncogene seri 100.0 3E-41 1E-45 343.8 22.1 261 281-563 33-298 (307)
66 3op5_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 355.3 19.4 267 282-563 33-327 (364)
67 1o6l_A RAC-beta serine/threoni 100.0 1E-41 3.5E-46 351.2 18.5 249 283-558 4-260 (337)
68 3t9t_A Tyrosine-protein kinase 100.0 6.5E-42 2.2E-46 341.2 16.4 256 282-563 6-262 (267)
69 2xir_A Vascular endothelial gr 100.0 7.1E-42 2.4E-46 349.6 17.1 270 274-563 17-308 (316)
70 3kex_A Receptor tyrosine-prote 100.0 2.5E-42 8.6E-47 354.8 13.8 257 283-564 12-275 (325)
71 4aw2_A Serine/threonine-protei 100.0 2.7E-42 9.3E-47 367.0 14.5 264 275-558 65-338 (437)
72 3c0i_A Peripheral plasma membr 100.0 4.4E-41 1.5E-45 349.2 23.0 256 283-558 23-286 (351)
73 4dc2_A Protein kinase C IOTA t 100.0 2.8E-41 9.5E-46 354.6 21.7 254 282-553 50-307 (396)
74 3cc6_A Protein tyrosine kinase 100.0 1.2E-41 4.1E-46 342.2 18.0 257 282-563 10-271 (281)
75 1p4o_A Insulin-like growth fac 100.0 5.5E-42 1.9E-46 351.6 15.8 267 276-563 17-297 (322)
76 1qpc_A LCK kinase; alpha beta 100.0 4.9E-42 1.7E-46 344.5 15.0 259 279-563 8-267 (279)
77 2y0a_A Death-associated protei 100.0 2E-41 6.7E-46 348.2 19.7 253 283-559 10-272 (326)
78 4e5w_A Tyrosine-protein kinase 100.0 4.5E-42 1.5E-46 348.9 14.6 264 283-562 20-299 (302)
79 3v8s_A RHO-associated protein 100.0 3.6E-42 1.2E-46 363.2 14.3 261 276-559 61-330 (410)
80 3lxp_A Non-receptor tyrosine-p 100.0 7.9E-42 2.7E-46 350.0 15.9 267 286-563 33-308 (318)
81 1tki_A Titin; serine kinase, m 100.0 8.2E-41 2.8E-45 342.7 23.3 251 283-558 4-257 (321)
82 2zv2_A Calcium/calmodulin-depe 100.0 2.3E-41 7.8E-46 343.2 18.9 250 283-558 12-292 (298)
83 1u59_A Tyrosine-protein kinase 100.0 2.8E-41 9.5E-46 340.6 19.2 256 283-563 8-270 (287)
84 3qup_A Tyrosine-protein kinase 100.0 1.5E-41 5E-46 348.6 17.4 264 279-563 18-296 (323)
85 3lzb_A Epidermal growth factor 100.0 2.3E-41 7.8E-46 347.9 18.8 256 283-563 14-276 (327)
86 2pmi_A Negative RE, cyclin-dep 100.0 6.9E-41 2.4E-45 342.8 22.1 266 283-558 4-293 (317)
87 1ob3_A PFPK5, cell division co 100.0 4.8E-41 1.6E-45 339.1 19.9 263 284-558 2-280 (288)
88 3a8x_A Protein kinase C IOTA t 100.0 6E-41 2.1E-45 346.9 20.9 253 283-553 8-264 (345)
89 1mqb_A Ephrin type-A receptor 100.0 4.5E-41 1.5E-45 346.6 19.6 257 283-563 43-307 (333)
90 3o0g_A Cell division protein k 100.0 5.7E-41 1.9E-45 339.2 20.0 263 284-558 2-282 (292)
91 2h8h_A Proto-oncogene tyrosine 100.0 9.4E-42 3.2E-46 373.6 15.0 261 278-564 261-522 (535)
92 3soa_A Calcium/calmodulin-depe 100.0 5.7E-41 2E-45 358.0 20.7 255 282-559 9-268 (444)
93 4hgt_A Casein kinase I isoform 100.0 2.1E-40 7.3E-45 335.3 23.9 261 282-563 7-278 (296)
94 3p1a_A MYT1 kinase, membrane-a 100.0 3.3E-41 1.1E-45 344.3 18.0 246 283-558 56-304 (311)
95 3kmu_A ILK, integrin-linked ki 100.0 1.5E-41 5.2E-46 339.0 15.2 252 283-563 9-268 (271)
96 3is5_A Calcium-dependent prote 100.0 9.7E-41 3.3E-45 336.4 21.1 254 283-558 21-278 (285)
97 3c1x_A Hepatocyte growth facto 100.0 2E-41 6.9E-46 354.2 16.7 255 285-563 90-353 (373)
98 2ozo_A Tyrosine-protein kinase 100.0 3.3E-41 1.1E-45 374.6 19.1 254 285-563 336-596 (613)
99 3h4j_B AMPK kdaid, SNF1-like p 100.0 3E-41 1E-45 347.5 17.4 246 284-558 9-258 (336)
100 3dbq_A Dual specificity protei 100.0 2.7E-41 9.1E-46 349.8 17.1 253 282-559 7-274 (343)
101 2eva_A TAK1 kinase - TAB1 chim 100.0 4.2E-41 1.4E-45 342.8 18.2 254 283-563 7-261 (307)
102 2bdw_A Hypothetical protein K1 100.0 1.4E-40 4.7E-45 346.7 22.4 254 282-559 27-285 (362)
103 4eut_A Serine/threonine-protei 100.0 6.6E-41 2.3E-45 353.7 20.1 274 283-563 8-307 (396)
104 2vd5_A DMPK protein; serine/th 100.0 1.5E-41 5.2E-46 358.7 15.1 263 275-558 52-327 (412)
105 2buj_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 344.2 17.9 264 282-565 27-306 (317)
106 4fr4_A YANK1, serine/threonine 100.0 8.2E-41 2.8E-45 349.8 20.4 251 283-558 14-271 (384)
107 3uc3_A Serine/threonine-protei 100.0 8.1E-41 2.8E-45 348.4 20.1 254 282-559 18-275 (361)
108 3hko_A Calcium/calmodulin-depe 100.0 1.6E-40 5.5E-45 344.1 22.2 262 279-558 21-330 (345)
109 3og7_A AKAP9-BRAF fusion prote 100.0 7E-41 2.4E-45 338.1 18.9 261 281-563 21-286 (289)
110 2wqm_A Serine/threonine-protei 100.0 5.4E-41 1.8E-45 342.4 18.2 262 283-563 31-295 (310)
111 3uzp_A CKI-delta, CKID, casein 100.0 4.1E-40 1.4E-44 333.3 24.4 260 283-563 8-278 (296)
112 1xbb_A Tyrosine-protein kinase 100.0 3.1E-41 1E-45 341.0 16.1 260 278-563 10-277 (291)
113 3pls_A Macrophage-stimulating 100.0 9.4E-41 3.2E-45 338.4 19.6 256 285-563 22-285 (298)
114 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-41 5.9E-46 351.8 14.4 246 281-553 20-269 (353)
115 1kob_A Twitchin; kinase, intra 100.0 2.7E-40 9.4E-45 346.8 23.4 253 283-559 50-305 (387)
116 3f66_A Hepatocyte growth facto 100.0 4.9E-41 1.7E-45 340.6 17.0 257 283-563 24-289 (298)
117 2v62_A Serine/threonine-protei 100.0 7.8E-41 2.7E-45 346.6 18.9 269 283-567 36-330 (345)
118 3gni_B Strad alpha; kinase fol 100.0 1.3E-40 4.6E-45 350.7 20.9 273 282-559 23-334 (389)
119 1fot_A TPK1 delta, CAMP-depend 100.0 3.1E-40 1.1E-44 337.6 22.9 246 283-558 5-258 (318)
120 2w4o_A Calcium/calmodulin-depe 100.0 7.5E-41 2.6E-45 347.1 18.4 252 282-559 51-306 (349)
121 2yex_A Serine/threonine-protei 100.0 1.4E-40 4.8E-45 333.2 19.8 253 283-558 6-261 (276)
122 3mdy_A Bone morphogenetic prot 100.0 2.9E-40 1E-44 340.8 22.8 272 274-563 27-329 (337)
123 3gxj_A TGF-beta receptor type- 100.0 2.6E-42 8.8E-47 350.6 7.2 258 283-565 2-297 (303)
124 2zmd_A Dual specificity protei 100.0 7.8E-41 2.7E-45 352.1 18.6 252 283-559 55-321 (390)
125 1fvr_A Tyrosine-protein kinase 100.0 5.2E-41 1.8E-45 345.3 16.8 257 284-563 25-298 (327)
126 1rdq_E PKA C-alpha, CAMP-depen 100.0 9E-41 3.1E-45 346.2 18.6 246 283-558 40-293 (350)
127 2h34_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 336.7 22.3 259 283-564 33-295 (309)
128 2yfx_A Tyrosine-protein kinase 100.0 8.5E-41 2.9E-45 343.7 17.9 261 282-563 28-302 (327)
129 2w5a_A Serine/threonine-protei 100.0 2.5E-41 8.5E-46 339.3 13.5 258 283-562 5-271 (279)
130 1b6c_B TGF-B superfamily recep 100.0 4.1E-40 1.4E-44 340.5 23.0 270 273-563 31-334 (342)
131 1xjd_A Protein kinase C, theta 100.0 2.5E-41 8.6E-46 349.3 13.7 251 280-557 13-268 (345)
132 3a62_A Ribosomal protein S6 ki 100.0 1.2E-40 4E-45 342.6 18.6 250 282-558 15-276 (327)
133 3lxl_A Tyrosine-protein kinase 100.0 2.6E-41 9E-46 347.5 13.7 272 283-564 22-302 (327)
134 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-40 5.8E-45 341.0 19.4 250 289-558 16-270 (325)
135 3brb_A Proto-oncogene tyrosine 100.0 1.4E-40 4.9E-45 339.7 18.6 265 278-563 28-306 (313)
136 3ork_A Serine/threonine protei 100.0 1.3E-40 4.6E-45 339.7 18.1 254 283-558 11-273 (311)
137 2a2a_A Death-associated protei 100.0 2.3E-40 7.8E-45 339.5 19.9 253 283-559 11-273 (321)
138 4agu_A Cyclin-dependent kinase 100.0 5.9E-40 2E-44 334.8 22.6 262 284-558 3-284 (311)
139 3a7i_A MST3 kinase, serine/thr 100.0 3.2E-40 1.1E-44 335.5 20.5 250 283-559 21-271 (303)
140 1u5q_A Serine/threonine protei 100.0 1.4E-40 4.6E-45 344.8 18.0 248 283-559 53-306 (348)
141 3kk8_A Calcium/calmodulin depe 100.0 3.7E-40 1.3E-44 331.6 20.7 252 283-558 5-261 (284)
142 3g2f_A Bone morphogenetic prot 100.0 7.9E-41 2.7E-45 345.1 16.1 268 282-563 11-316 (336)
143 3dls_A PAS domain-containing s 100.0 1.5E-40 5.2E-45 342.8 17.9 244 282-559 22-275 (335)
144 2jii_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45 346.0 17.3 261 283-563 41-334 (352)
145 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.4E-40 1.5E-44 343.7 21.1 254 280-563 61-337 (365)
146 3llt_A Serine/threonine kinase 100.0 1.6E-40 5.4E-45 346.3 17.6 210 271-492 22-262 (360)
147 2eue_A Carbon catabolite derep 100.0 9.6E-40 3.3E-44 327.2 22.5 246 284-558 13-262 (275)
148 2x4f_A Myosin light chain kina 100.0 2.1E-40 7.1E-45 346.6 18.3 246 289-558 94-342 (373)
149 4fvq_A Tyrosine-protein kinase 100.0 2.1E-40 7.3E-45 334.3 17.7 254 283-567 7-277 (289)
150 2i0e_A Protein kinase C-beta I 100.0 1.6E-40 5.5E-45 344.4 16.9 246 281-553 17-266 (353)
151 1byg_A CSK, protein (C-termina 100.0 1.4E-40 4.6E-45 333.9 15.8 251 282-563 19-271 (278)
152 3fdn_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 333.6 16.3 249 282-559 7-258 (279)
153 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-40 4E-45 346.5 15.6 256 283-560 53-323 (355)
154 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-40 6.1E-45 334.2 16.5 247 283-558 10-279 (289)
155 4fl3_A Tyrosine-protein kinase 100.0 1.7E-40 5.8E-45 369.8 17.8 247 290-562 375-628 (635)
156 2y94_A 5'-AMP-activated protei 100.0 3.5E-40 1.2E-44 354.3 19.6 248 283-558 15-266 (476)
157 1nxk_A MAP kinase-activated pr 100.0 9.8E-40 3.4E-44 344.8 22.5 252 284-559 61-322 (400)
158 3cok_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 330.7 18.3 250 283-558 10-262 (278)
159 4ejn_A RAC-alpha serine/threon 100.0 6.1E-41 2.1E-45 359.6 13.5 250 282-558 146-404 (446)
160 3g33_A Cell division protein k 100.0 4.9E-40 1.7E-44 335.0 19.4 265 281-558 6-296 (308)
161 3oz6_A Mitogen-activated prote 100.0 1.2E-39 4.3E-44 343.1 22.9 265 282-559 7-329 (388)
162 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.6E-40 1.6E-44 357.4 20.0 254 282-554 183-439 (543)
163 4aaa_A Cyclin-dependent kinase 100.0 8E-40 2.7E-44 337.0 20.8 264 283-558 24-306 (331)
164 2a19_B Interferon-induced, dou 100.0 2.4E-40 8.3E-45 332.8 16.4 248 282-564 9-273 (284)
165 3bhy_A Death-associated protei 100.0 4.9E-40 1.7E-44 330.6 18.4 252 283-558 4-265 (283)
166 3eqc_A Dual specificity mitoge 100.0 1.3E-40 4.6E-45 346.9 14.7 267 283-558 32-324 (360)
167 2r5t_A Serine/threonine-protei 100.0 1.5E-40 5E-45 347.1 14.8 258 283-567 37-298 (373)
168 1u46_A ACK-1, activated CDC42 100.0 2.1E-40 7E-45 334.6 15.4 258 283-564 17-283 (291)
169 3f3z_A Calcium/calmodulin-depe 100.0 7.7E-40 2.6E-44 328.2 19.4 250 283-558 8-261 (277)
170 2ac3_A MAP kinase-interacting 100.0 4E-40 1.4E-44 336.8 17.5 260 284-558 12-295 (316)
171 2w1i_A JAK2; chromosomal rearr 100.0 4.1E-40 1.4E-44 338.4 17.7 266 282-563 39-320 (326)
172 3fme_A Dual specificity mitoge 100.0 2.2E-40 7.4E-45 334.3 15.0 256 282-558 5-266 (290)
173 2acx_A G protein-coupled recep 100.0 6.7E-40 2.3E-44 356.9 19.8 255 282-558 182-444 (576)
174 3an0_A Dual specificity mitoge 100.0 2.1E-40 7.3E-45 342.6 15.1 257 281-558 48-310 (340)
175 3ttj_A Mitogen-activated prote 100.0 1.9E-39 6.5E-44 348.8 23.0 261 283-559 61-356 (464)
176 3byv_A Rhoptry kinase; malaria 100.0 1E-40 3.4E-45 350.1 12.5 244 283-558 72-359 (377)
177 3ll6_A Cyclin G-associated kin 100.0 2.1E-40 7.1E-45 341.7 14.5 256 281-563 25-306 (337)
178 3mtl_A Cell division protein k 100.0 2.1E-40 7.2E-45 340.3 14.4 262 284-558 2-281 (324)
179 3nsz_A CK II alpha, casein kin 100.0 3.7E-39 1.2E-43 331.8 23.3 256 283-558 35-319 (330)
180 2vwi_A Serine/threonine-protei 100.0 1.1E-40 3.6E-45 338.7 11.0 267 280-558 11-287 (303)
181 3rp9_A Mitogen-activated prote 100.0 2.9E-39 9.9E-44 347.9 22.8 195 283-485 52-280 (458)
182 1t4h_A Serine/threonine-protei 100.0 1E-39 3.5E-44 329.6 18.0 247 285-558 27-282 (290)
183 3lm5_A Serine/threonine-protei 100.0 9.6E-40 3.3E-44 335.8 17.7 259 278-558 22-287 (327)
184 2j0j_A Focal adhesion kinase 1 100.0 6.9E-40 2.4E-44 366.2 18.0 260 279-563 385-649 (656)
185 3eb0_A Putative uncharacterize 100.0 1.1E-39 3.6E-44 343.0 18.2 264 280-558 3-321 (383)
186 1cm8_A Phosphorylated MAP kina 100.0 3.8E-39 1.3E-43 336.5 22.2 258 283-558 24-307 (367)
187 2rku_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 326.2 21.5 249 283-558 14-265 (294)
188 2y7j_A Phosphorylase B kinase 100.0 1.1E-38 3.7E-43 332.9 25.6 259 276-558 86-359 (365)
189 3sv0_A Casein kinase I-like; t 100.0 5E-39 1.7E-43 345.9 23.7 261 283-564 6-277 (483)
190 2qr7_A Ribosomal protein S6 ki 100.0 5.2E-40 1.8E-44 339.5 15.3 252 282-558 20-277 (342)
191 3i6u_A CDS1, serine/threonine- 100.0 1.5E-39 5.1E-44 345.7 19.2 253 282-558 133-399 (419)
192 2vgo_A Serine/threonine-protei 100.0 1.5E-39 5.1E-44 327.4 18.2 247 283-558 13-262 (284)
193 2clq_A Mitogen-activated prote 100.0 3.1E-39 1.1E-43 326.7 19.9 252 285-558 23-278 (295)
194 3q60_A ROP5B; pseudokinase, tr 100.0 3.2E-40 1.1E-44 345.5 13.0 255 283-558 61-352 (371)
195 3pg1_A Mitogen-activated prote 100.0 9.4E-40 3.2E-44 340.8 16.5 270 275-558 13-316 (362)
196 3mi9_A Cell division protein k 100.0 5.5E-39 1.9E-43 333.5 22.1 264 283-558 16-311 (351)
197 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-39 5.7E-44 334.3 17.8 265 281-558 31-318 (329)
198 1ua2_A CAK, cell division prot 100.0 4.2E-39 1.4E-43 333.7 20.9 266 282-559 8-292 (346)
199 2owb_A Serine/threonine-protei 100.0 4.2E-39 1.5E-43 332.2 20.8 249 283-558 40-291 (335)
200 2jam_A Calcium/calmodulin-depe 100.0 2.6E-39 8.8E-44 329.0 18.9 251 282-558 7-261 (304)
201 3com_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 324.9 24.2 252 281-558 26-278 (314)
202 3qyz_A Mitogen-activated prote 100.0 9.3E-39 3.2E-43 333.5 23.1 262 283-558 26-313 (364)
203 2j7t_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 326.7 19.9 253 282-558 17-275 (302)
204 3mwu_A Calmodulin-domain prote 100.0 7.9E-39 2.7E-43 347.0 23.1 252 283-559 21-277 (486)
205 1wak_A Serine/threonine-protei 100.0 8.2E-39 2.8E-43 337.6 22.5 265 283-558 36-391 (397)
206 3q5i_A Protein kinase; CDPK, m 100.0 1.3E-38 4.5E-43 346.8 24.6 252 282-558 34-301 (504)
207 3n9x_A Phosphotransferase; mal 100.0 3E-39 1E-43 344.8 19.1 200 283-490 25-253 (432)
208 2pml_X PFPK7, Ser/Thr protein 100.0 1.9E-39 6.6E-44 336.4 17.0 259 283-558 30-322 (348)
209 3lij_A Calcium/calmodulin depe 100.0 1.3E-38 4.5E-43 345.9 24.1 251 283-558 36-291 (494)
210 2h6d_A 5'-AMP-activated protei 100.0 7.1E-39 2.4E-43 320.9 20.2 248 283-558 10-261 (276)
211 3nyv_A Calmodulin-domain prote 100.0 5.2E-39 1.8E-43 348.4 20.6 252 282-558 24-281 (484)
212 2x7f_A TRAF2 and NCK-interacti 100.0 9E-40 3.1E-44 335.7 13.6 261 277-562 17-292 (326)
213 2r3i_A Cell division protein k 100.0 8.8E-39 3E-43 324.1 20.5 264 284-558 3-283 (299)
214 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-38 4.6E-43 330.7 22.0 263 283-558 10-305 (353)
215 3pfq_A PKC-B, PKC-beta, protei 100.0 4E-39 1.4E-43 361.1 19.1 246 281-553 338-587 (674)
216 4e7w_A Glycogen synthase kinas 100.0 2.1E-39 7E-44 341.9 15.5 262 283-559 39-322 (394)
217 1j1b_A Glycogen synthase kinas 100.0 3.4E-39 1.2E-43 343.0 17.3 260 284-558 54-336 (420)
218 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-39 4.3E-44 333.5 13.0 262 277-564 26-301 (319)
219 3cek_A Dual specificity protei 100.0 6.4E-39 2.2E-43 327.5 18.2 254 280-558 24-292 (313)
220 2ycf_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 329.7 17.5 253 282-558 8-274 (322)
221 3e3p_A Protein kinase, putativ 100.0 1.1E-38 3.8E-43 332.3 20.0 270 277-558 16-314 (360)
222 2wtk_C Serine/threonine-protei 100.0 4.8E-38 1.7E-42 319.6 23.7 252 283-559 4-264 (305)
223 1blx_A Cyclin-dependent kinase 100.0 3.5E-39 1.2E-43 331.2 15.3 265 282-558 9-296 (326)
224 3rgf_A Cyclin-dependent kinase 100.0 1E-38 3.5E-43 338.1 19.3 268 284-558 20-333 (405)
225 3kvw_A DYRK2, dual specificity 100.0 1E-38 3.6E-43 340.1 19.2 198 283-492 96-302 (429)
226 1phk_A Phosphorylase kinase; g 100.0 1.5E-38 5.1E-43 322.2 19.4 253 282-558 15-283 (298)
227 2xrw_A Mitogen-activated prote 100.0 2.4E-38 8.3E-43 331.1 21.6 260 283-558 24-318 (371)
228 2fst_X Mitogen-activated prote 100.0 1.1E-38 3.7E-43 332.9 18.3 259 283-559 28-312 (367)
229 2rio_A Serine/threonine-protei 100.0 2.6E-38 9E-43 337.6 19.9 253 284-558 15-295 (434)
230 4exu_A Mitogen-activated prote 100.0 4.4E-38 1.5E-42 329.2 21.0 258 283-558 41-323 (371)
231 3aln_A Dual specificity mitoge 100.0 7.8E-39 2.7E-43 329.0 15.0 258 283-558 21-285 (327)
232 1z57_A Dual specificity protei 100.0 7.3E-38 2.5E-42 322.8 22.3 259 283-558 13-328 (339)
233 1q8y_A SR protein kinase; tran 100.0 5.4E-38 1.9E-42 328.6 21.4 265 283-558 18-333 (373)
234 1zy4_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 322.6 16.3 251 283-558 5-283 (303)
235 2wei_A Calmodulin-domain prote 100.0 7.4E-38 2.5E-42 315.5 21.1 252 282-558 20-276 (287)
236 2i6l_A Mitogen-activated prote 100.0 6.5E-38 2.2E-42 320.6 19.7 262 283-558 10-305 (320)
237 2vx3_A Dual specificity tyrosi 100.0 2.1E-37 7.3E-42 325.3 23.5 202 281-492 51-261 (382)
238 3fhr_A MAP kinase-activated pr 100.0 5E-38 1.7E-42 324.2 17.5 253 282-558 26-287 (336)
239 3coi_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 322.2 21.9 258 283-558 23-305 (353)
240 3a99_A Proto-oncogene serine/t 100.0 2.9E-38 9.8E-43 323.8 15.5 247 277-558 36-293 (320)
241 2iwi_A Serine/threonine-protei 100.0 9.1E-38 3.1E-42 318.7 18.7 248 277-559 24-284 (312)
242 2dyl_A Dual specificity mitoge 100.0 4.2E-37 1.4E-41 314.5 20.7 252 283-558 24-283 (318)
243 2eu9_A Dual specificity protei 100.0 5.7E-37 1.9E-41 318.3 21.9 259 283-558 18-333 (355)
244 3p23_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 331.4 16.2 250 282-558 22-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 7.1E-38 2.4E-42 344.3 13.2 260 283-555 13-294 (676)
246 2pzi_A Probable serine/threoni 100.0 2.7E-37 9.2E-42 348.3 16.2 239 283-562 79-325 (681)
247 3uqc_A Probable conserved tran 100.0 4.6E-36 1.6E-40 302.2 17.9 230 283-564 30-264 (286)
248 3dzo_A Rhoptry kinase domain; 100.0 2.2E-36 7.6E-41 320.6 14.1 244 283-558 77-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 3.8E-35 1.3E-39 297.6 19.9 226 284-558 17-256 (299)
250 2vuw_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 310.2 11.6 243 282-557 18-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.6E-34 278.0 5.9 185 292-488 242-437 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 4E-27 1.4E-31 240.0 10.7 174 21-196 2-187 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 6.2E-27 2.1E-31 255.4 9.7 187 285-489 337-538 (540)
254 3rgz_A Protein brassinosteroid 99.9 3.3E-24 1.1E-28 245.0 9.2 176 17-195 4-212 (768)
255 4ecn_A Leucine-rich repeat pro 99.9 1.9E-24 6.4E-29 246.6 6.9 172 20-196 264-561 (876)
256 1zar_A RIO2 kinase; serine kin 99.9 1.3E-23 4.3E-28 210.4 10.9 153 277-462 83-252 (282)
257 4eco_A Uncharacterized protein 99.9 1.3E-23 4.6E-28 234.7 8.9 174 21-196 26-318 (636)
258 3e6j_A Variable lymphocyte rec 99.8 2.2E-21 7.6E-26 188.1 11.1 148 52-200 16-176 (229)
259 4fcg_A Uncharacterized protein 99.8 3.6E-22 1.2E-26 204.6 5.0 172 21-196 23-219 (328)
260 2v9t_B SLIT homolog 2 protein 99.8 7.8E-21 2.7E-25 183.1 9.8 147 55-201 11-170 (220)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-20 5.6E-25 180.8 9.2 147 55-201 11-171 (220)
262 3rgz_A Protein brassinosteroid 99.8 2.2E-20 7.6E-25 213.3 8.6 124 86-210 628-753 (768)
263 2o6s_A Variable lymphocyte rec 99.8 9.3E-20 3.2E-24 173.9 11.3 147 54-200 6-165 (208)
264 1zth_A RIO1 serine protein kin 99.8 3.8E-19 1.3E-23 175.6 13.6 138 285-438 48-219 (258)
265 1w8a_A SLIT protein; signaling 99.8 4.2E-19 1.4E-23 167.1 10.8 146 55-200 8-166 (192)
266 3oja_A Leucine-rich immune mol 99.8 1.2E-20 4.2E-25 203.7 -1.7 141 55-199 109-253 (487)
267 1ogq_A PGIP-2, polygalacturona 99.7 5.7E-19 2E-23 179.6 5.7 136 67-205 175-312 (313)
268 3m19_A Variable lymphocyte rec 99.7 5.4E-18 1.9E-22 166.6 11.5 133 66-198 59-194 (251)
269 3m19_A Variable lymphocyte rec 99.7 5E-18 1.7E-22 166.9 10.5 130 67-196 36-168 (251)
270 1w8a_A SLIT protein; signaling 99.7 5.1E-18 1.7E-22 159.6 9.5 130 69-201 11-144 (192)
271 3rfs_A Internalin B, repeat mo 99.7 1.4E-17 4.9E-22 165.7 11.5 136 65-200 84-222 (272)
272 2o6r_A Variable lymphocyte rec 99.7 8.6E-18 3E-22 155.8 8.7 125 55-179 7-141 (177)
273 2wfh_A SLIT homolog 2 protein 99.7 1.4E-17 4.7E-22 156.7 9.7 129 69-201 13-144 (193)
274 1p9a_G Platelet glycoprotein I 99.7 2.3E-17 8E-22 165.7 11.3 134 65-200 76-212 (290)
275 2o6q_A Variable lymphocyte rec 99.7 4.4E-17 1.5E-21 162.0 11.6 135 66-200 85-222 (270)
276 2o6q_A Variable lymphocyte rec 99.7 3.3E-17 1.1E-21 162.9 10.6 129 67-195 38-169 (270)
277 4g8a_A TOLL-like receptor 4; l 99.7 3E-17 1E-21 183.0 9.8 158 40-197 9-187 (635)
278 1ozn_A Reticulon 4 receptor; N 99.7 4.1E-17 1.4E-21 163.5 8.9 134 67-200 106-242 (285)
279 4gyi_A RIO2 kinase; protein ki 99.7 4.4E-17 1.5E-21 167.3 9.0 143 283-438 94-265 (397)
280 2xot_A Amphoterin-induced prot 99.7 2E-17 6.9E-22 171.6 6.4 121 55-175 18-149 (361)
281 2wfh_A SLIT homolog 2 protein 99.7 7E-17 2.4E-21 151.9 8.5 123 55-178 10-142 (193)
282 2xot_A Amphoterin-induced prot 99.7 5.7E-17 1.9E-21 168.3 8.6 135 64-200 62-206 (361)
283 3v47_A TOLL-like receptor 5B a 99.7 6.5E-17 2.2E-21 173.2 8.8 135 66-200 275-412 (455)
284 2z66_A Variable lymphocyte rec 99.7 6.3E-17 2.2E-21 163.8 8.0 133 67-199 127-264 (306)
285 2v70_A SLIT-2, SLIT homolog 2 99.7 1.5E-16 5.1E-21 153.0 8.7 115 65-179 56-170 (220)
286 4fcg_A Uncharacterized protein 99.6 1.4E-16 4.7E-21 163.0 8.6 131 65-197 149-291 (328)
287 4g8a_A TOLL-like receptor 4; l 99.6 1.2E-16 4.2E-21 178.2 8.5 136 66-201 445-585 (635)
288 2o6r_A Variable lymphocyte rec 99.6 3.7E-16 1.3E-20 144.8 9.5 130 68-200 9-141 (177)
289 2ell_A Acidic leucine-rich nuc 99.6 1.5E-16 5.2E-21 146.0 6.7 128 66-196 24-160 (168)
290 2z62_A TOLL-like receptor 4, v 99.6 5.1E-16 1.8E-20 154.7 11.0 130 67-196 29-162 (276)
291 3vq2_A TLR4, TOLL-like recepto 99.6 1.8E-16 6.3E-21 176.1 7.9 135 66-201 424-563 (606)
292 3oja_B Anopheles plasmodium-re 99.6 5E-16 1.7E-20 172.2 10.5 153 43-196 8-184 (597)
293 3vq2_A TLR4, TOLL-like recepto 99.6 5.3E-16 1.8E-20 172.4 10.5 145 53-197 5-167 (606)
294 3v47_A TOLL-like receptor 5B a 99.6 3.1E-16 1.1E-20 167.9 8.1 144 53-196 6-167 (455)
295 2z81_A CD282 antigen, TOLL-lik 99.6 1.7E-16 5.8E-21 174.2 5.5 142 54-196 3-161 (549)
296 2je0_A Acidic leucine-rich nuc 99.6 1.7E-16 5.6E-21 142.7 4.2 120 66-187 17-141 (149)
297 4b8c_D Glucose-repressible alc 99.6 3.9E-16 1.3E-20 176.3 8.1 171 22-196 129-329 (727)
298 2xwt_C Thyrotropin receptor; s 99.6 3.9E-16 1.3E-20 152.1 7.0 129 66-196 31-169 (239)
299 2v9t_B SLIT homolog 2 protein 99.6 9.2E-16 3.1E-20 147.4 9.1 113 65-177 55-167 (220)
300 3zyj_A Leucine-rich repeat-con 99.6 9E-16 3.1E-20 163.7 10.0 134 66-201 136-297 (440)
301 2o6s_A Variable lymphocyte rec 99.6 1.9E-15 6.4E-20 143.9 11.2 115 65-179 51-165 (208)
302 2z80_A TOLL-like receptor 2, v 99.6 3.3E-16 1.1E-20 162.0 6.0 143 52-196 27-187 (353)
303 1ozn_A Reticulon 4 receptor; N 99.6 1.2E-15 4.1E-20 152.8 9.9 131 66-196 32-166 (285)
304 3rfs_A Internalin B, repeat mo 99.6 2.1E-15 7.3E-20 149.9 11.1 131 65-197 62-195 (272)
305 3j0a_A TOLL-like receptor 5; m 99.6 2.4E-16 8.3E-21 181.8 3.8 135 65-201 425-565 (844)
306 3zyi_A Leucine-rich repeat-con 99.6 1.5E-15 5E-20 162.6 9.4 135 65-201 146-308 (452)
307 2id5_A Lingo-1, leucine rich r 99.6 1.6E-15 5.6E-20 163.4 9.0 141 56-196 12-165 (477)
308 3g39_A Variable lymphocyte rec 99.6 2.4E-15 8.2E-20 138.3 8.7 108 69-179 12-119 (170)
309 2z62_A TOLL-like receptor 4, v 99.6 1.9E-15 6.4E-20 150.6 8.6 135 66-200 76-241 (276)
310 3t6q_A CD180 antigen; protein- 99.6 1.9E-15 6.6E-20 167.9 9.5 140 57-196 14-166 (606)
311 3o6n_A APL1; leucine-rich repe 99.6 1.5E-15 5.1E-20 159.2 8.0 151 44-196 3-178 (390)
312 1p9a_G Platelet glycoprotein I 99.6 3.9E-15 1.3E-19 149.4 10.5 106 67-175 32-137 (290)
313 3t6q_A CD180 antigen; protein- 99.6 1.6E-15 5.3E-20 168.6 8.4 134 66-200 425-564 (606)
314 3e6j_A Variable lymphocyte rec 99.6 3.4E-15 1.2E-19 144.4 9.6 114 65-179 63-176 (229)
315 3j0a_A TOLL-like receptor 5; m 99.6 1.7E-15 5.7E-20 174.8 8.7 141 55-196 14-161 (844)
316 3zyi_A Leucine-rich repeat-con 99.6 2.5E-15 8.7E-20 160.7 9.4 141 57-197 56-210 (452)
317 2r9u_A Variable lymphocyte rec 99.6 2.9E-15 1E-19 138.2 8.4 108 69-180 15-122 (174)
318 2z63_A TOLL-like receptor 4, v 99.6 2.5E-15 8.6E-20 165.5 8.6 135 66-200 396-535 (570)
319 1ziw_A TOLL-like receptor 3; i 99.6 3.2E-15 1.1E-19 168.5 9.6 136 66-201 480-627 (680)
320 3zyj_A Leucine-rich repeat-con 99.6 4.7E-15 1.6E-19 158.0 10.4 140 57-196 45-198 (440)
321 3o53_A Protein LRIM1, AGAP0063 99.6 2.1E-15 7.2E-20 153.5 6.6 138 57-198 111-252 (317)
322 4ezg_A Putative uncharacterize 99.6 2.2E-15 7.5E-20 142.2 6.2 123 67-194 67-192 (197)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 3.4E-15 1.2E-19 164.3 8.5 134 65-200 352-514 (562)
324 1dce_A Protein (RAB geranylger 99.6 3.2E-15 1.1E-19 163.8 7.9 108 67-179 442-550 (567)
325 2z7x_B TOLL-like receptor 1, v 99.6 2.4E-15 8E-20 164.0 6.6 135 64-199 322-484 (520)
326 2ft3_A Biglycan; proteoglycan, 99.6 6.5E-15 2.2E-19 150.8 9.6 139 55-196 33-185 (332)
327 2z66_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 149.7 8.7 130 66-196 78-212 (306)
328 4b8c_D Glucose-repressible alc 99.5 1.2E-15 4.1E-20 172.2 4.2 129 65-197 223-355 (727)
329 4eco_A Uncharacterized protein 99.5 1.1E-15 3.6E-20 170.7 3.5 130 65-196 205-366 (636)
330 1ziw_A TOLL-like receptor 3; i 99.5 7.3E-15 2.5E-19 165.5 10.2 131 66-196 25-158 (680)
331 3oja_B Anopheles plasmodium-re 99.5 2.1E-15 7.3E-20 167.1 5.6 130 66-199 232-361 (597)
332 1a9n_A U2A', U2A'; complex (nu 99.5 4.6E-15 1.6E-19 137.2 6.5 125 65-195 18-152 (176)
333 3o6n_A APL1; leucine-rich repe 99.5 1.2E-14 4.1E-19 152.3 10.1 131 66-196 69-199 (390)
334 1wwl_A Monocyte differentiatio 99.5 1.3E-15 4.3E-20 154.7 2.4 132 65-197 94-242 (312)
335 4ezg_A Putative uncharacterize 99.5 5E-15 1.7E-19 139.7 6.2 128 65-196 43-172 (197)
336 2id5_A Lingo-1, leucine rich r 99.5 7.5E-15 2.6E-19 158.2 7.7 134 68-201 202-338 (477)
337 3g39_A Variable lymphocyte rec 99.5 1.5E-14 5E-19 133.0 8.3 107 91-200 10-119 (170)
338 2z63_A TOLL-like receptor 4, v 99.5 1.6E-14 5.6E-19 159.0 10.1 131 66-196 28-162 (570)
339 2ifg_A High affinity nerve gro 99.5 1.1E-14 3.9E-19 150.0 8.2 133 55-201 8-146 (347)
340 4glp_A Monocyte differentiatio 99.5 7.7E-15 2.6E-19 148.8 6.8 131 65-197 144-286 (310)
341 3cvr_A Invasion plasmid antige 99.5 5E-15 1.7E-19 161.5 5.4 137 43-197 32-174 (571)
342 1wwl_A Monocyte differentiatio 99.5 3.8E-15 1.3E-19 151.2 4.0 131 65-196 120-266 (312)
343 1xku_A Decorin; proteoglycan, 99.5 1.6E-14 5.5E-19 147.7 8.3 140 54-196 30-184 (330)
344 1xku_A Decorin; proteoglycan, 99.5 2.5E-14 8.4E-19 146.4 9.4 129 65-197 144-277 (330)
345 4ecn_A Leucine-rich repeat pro 99.5 5.3E-15 1.8E-19 168.8 4.3 129 65-196 447-608 (876)
346 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1E-14 3.6E-19 160.5 6.4 127 66-195 52-181 (562)
347 4glp_A Monocyte differentiatio 99.5 1.2E-14 4E-19 147.4 5.9 131 65-196 116-264 (310)
348 2r9u_A Variable lymphocyte rec 99.5 3.7E-14 1.3E-18 130.8 8.4 106 92-200 14-122 (174)
349 2ell_A Acidic leucine-rich nuc 99.5 1.4E-14 4.8E-19 132.8 5.2 114 65-181 48-165 (168)
350 2z80_A TOLL-like receptor 2, v 99.5 1.8E-14 6.3E-19 148.8 6.0 130 65-195 75-210 (353)
351 2z7x_B TOLL-like receptor 1, v 99.5 9.4E-15 3.2E-19 159.2 3.8 127 66-195 21-150 (520)
352 2xwt_C Thyrotropin receptor; s 99.5 3E-14 1E-18 138.7 6.4 127 65-194 54-190 (239)
353 2ft3_A Biglycan; proteoglycan, 99.5 1.6E-13 5.5E-18 140.4 11.4 125 67-195 124-253 (332)
354 3oja_A Leucine-rich immune mol 99.5 2.1E-14 7.2E-19 154.9 4.5 34 322-355 320-353 (487)
355 2z81_A CD282 antigen, TOLL-lik 99.4 3.9E-14 1.3E-18 155.3 6.2 130 65-194 49-183 (549)
356 1h6t_A Internalin B; cell adhe 99.4 1.3E-13 4.4E-18 138.4 8.3 124 65-196 67-191 (291)
357 1xeu_A Internalin C; cellular 99.4 1.2E-13 4E-18 136.5 7.0 100 67-175 64-163 (263)
358 2je0_A Acidic leucine-rich nuc 99.4 3E-14 1E-18 127.8 2.2 105 65-171 41-149 (149)
359 1h6u_A Internalin H; cell adhe 99.4 9.8E-14 3.4E-18 140.4 6.2 127 64-198 83-210 (308)
360 2ifg_A High affinity nerve gro 99.4 1.2E-13 4.2E-18 142.2 6.3 106 93-200 11-120 (347)
361 1xeu_A Internalin C; cellular 99.4 3.3E-13 1.1E-17 133.3 8.9 124 65-198 40-165 (263)
362 1h6t_A Internalin B; cell adhe 99.4 1.9E-13 6.5E-18 137.2 7.2 125 64-197 88-214 (291)
363 1ds9_A Outer arm dynein; leuci 99.4 1E-15 3.6E-20 144.5 -9.2 86 85-175 43-128 (198)
364 1a9n_A U2A', U2A'; complex (nu 99.4 5.5E-14 1.9E-18 129.9 2.7 106 66-175 42-153 (176)
365 1h6u_A Internalin H; cell adhe 99.4 3.7E-13 1.3E-17 136.2 8.9 125 65-197 62-187 (308)
366 4fmz_A Internalin; leucine ric 99.4 2.6E-13 9E-18 139.6 6.5 124 66-197 199-325 (347)
367 1m9s_A Internalin B; cell inva 99.4 4.4E-13 1.5E-17 147.7 8.7 124 65-196 64-188 (605)
368 3o53_A Protein LRIM1, AGAP0063 99.4 1.8E-13 6.1E-18 139.1 4.0 125 65-193 143-272 (317)
369 3g06_A SSPH2 (leucine-rich rep 99.4 1.5E-13 5.3E-18 151.6 3.4 138 42-196 10-154 (622)
370 1m9s_A Internalin B; cell inva 99.4 7.2E-13 2.4E-17 146.0 8.1 125 64-197 85-211 (605)
371 4ay9_X Follicle-stimulating ho 99.3 8.7E-13 3E-17 136.0 8.1 141 55-196 9-167 (350)
372 3cvr_A Invasion plasmid antige 99.3 1.1E-12 3.7E-17 143.1 8.9 116 64-196 98-220 (571)
373 1dce_A Protein (RAB geranylger 99.3 1.6E-13 5.4E-18 150.3 1.2 103 91-198 442-548 (567)
374 1o6v_A Internalin A; bacterial 99.3 1E-12 3.4E-17 141.1 7.2 122 66-196 243-366 (466)
375 1ds9_A Outer arm dynein; leuci 99.3 9.3E-15 3.2E-19 137.9 -7.9 110 65-180 47-158 (198)
376 3bz5_A Internalin-J, INLJ; leu 99.3 2.7E-12 9.3E-17 137.1 9.5 123 65-196 169-299 (457)
377 3bz5_A Internalin-J, INLJ; leu 99.3 5.6E-12 1.9E-16 134.6 10.2 128 58-197 119-247 (457)
378 1jl5_A Outer protein YOPM; leu 99.3 3.4E-13 1.2E-17 144.0 0.2 122 67-196 35-186 (454)
379 1o6v_A Internalin A; bacterial 99.3 4.3E-12 1.5E-16 136.2 8.3 126 65-198 220-346 (466)
380 1jl5_A Outer protein YOPM; leu 99.3 7.6E-12 2.6E-16 133.5 10.0 118 66-196 131-250 (454)
381 3tm0_A Aminoglycoside 3'-phosp 99.3 2.5E-11 8.7E-16 119.5 13.0 146 281-437 11-213 (263)
382 2ast_B S-phase kinase-associat 99.2 1.4E-13 4.9E-18 140.9 -4.9 128 66-194 70-206 (336)
383 4fmz_A Internalin; leucine ric 99.2 6.8E-12 2.3E-16 129.0 7.7 121 66-195 177-299 (347)
384 2ca6_A RAN GTPase-activating p 99.2 2.5E-13 8.5E-18 142.1 -3.4 129 67-195 160-315 (386)
385 1nd4_A Aminoglycoside 3'-phosp 99.2 5E-11 1.7E-15 117.1 10.9 136 286-437 22-214 (264)
386 3goz_A Leucine-rich repeat-con 99.2 9.8E-13 3.4E-17 136.3 -1.4 129 67-195 23-179 (362)
387 2ast_B S-phase kinase-associat 99.2 6.5E-13 2.2E-17 135.9 -3.5 130 66-195 93-234 (336)
388 3g06_A SSPH2 (leucine-rich rep 99.2 3.7E-11 1.3E-15 132.6 9.5 113 66-195 61-173 (622)
389 2ca6_A RAN GTPase-activating p 99.2 7.1E-13 2.4E-17 138.6 -4.2 131 65-195 93-256 (386)
390 3goz_A Leucine-rich repeat-con 99.2 2E-12 7E-17 133.9 -1.3 127 70-196 2-151 (362)
391 3dxp_A Putative acyl-COA dehyd 99.1 4.5E-10 1.5E-14 116.0 12.6 144 288-438 42-249 (359)
392 4ay9_X Follicle-stimulating ho 99.0 4.5E-10 1.5E-14 115.6 8.0 124 68-194 82-234 (350)
393 1z7x_W Ribonuclease inhibitor; 99.0 8.9E-12 3E-16 133.3 -5.4 132 65-196 255-411 (461)
394 1z7x_W Ribonuclease inhibitor; 99.0 1E-11 3.4E-16 132.9 -6.7 132 65-196 226-383 (461)
395 3sg8_A APH(2'')-ID; antibiotic 98.9 9.8E-10 3.4E-14 110.7 8.1 185 289-489 25-287 (304)
396 3rw6_A Nuclear RNA export fact 98.9 3.7E-11 1.3E-15 117.4 -6.0 134 54-190 77-255 (267)
397 3un9_A NLR family member X1; l 98.8 9.2E-11 3.2E-15 121.5 -6.0 130 66-195 101-251 (372)
398 3rw6_A Nuclear RNA export fact 98.7 1.2E-09 4.2E-14 106.7 -0.7 80 87-168 167-257 (267)
399 3un9_A NLR family member X1; l 98.7 7.6E-10 2.6E-14 114.6 -3.4 117 66-182 126-259 (372)
400 3r70_A Aminoglycoside phosphot 98.6 2.3E-07 7.9E-12 93.9 13.5 137 285-438 38-238 (320)
401 3sb4_A Hypothetical leucine ri 98.6 6.8E-08 2.3E-12 98.3 7.6 127 66-196 101-310 (329)
402 3d1u_A Putative fructosamine-3 98.5 6.2E-07 2.1E-11 89.1 13.5 143 287-436 18-215 (288)
403 3sb4_A Hypothetical leucine ri 98.5 6.2E-08 2.1E-12 98.5 5.8 98 89-188 225-323 (329)
404 1io0_A Tropomodulin; LRR prote 98.5 6.2E-09 2.1E-13 96.6 -3.3 111 65-175 35-164 (185)
405 4gkh_A Aminoglycoside 3'-phosp 98.5 1.7E-06 5.7E-11 85.2 13.9 135 291-437 31-223 (272)
406 3ogk_B Coronatine-insensitive 98.4 3.8E-08 1.3E-12 108.5 0.0 102 68-170 140-251 (592)
407 3tdw_A Gentamicin resistance p 98.4 2.8E-06 9.6E-11 85.2 13.5 137 289-438 24-225 (306)
408 3ogk_B Coronatine-insensitive 98.3 7.2E-08 2.5E-12 106.2 0.6 127 66-194 164-304 (592)
409 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.1E-06 2.1E-10 84.8 12.6 145 287-438 44-244 (362)
410 2p1m_B Transport inhibitor res 98.2 1.6E-08 5.4E-13 111.6 -8.1 128 67-195 373-518 (594)
411 3ats_A Putative uncharacterize 98.2 3.7E-06 1.3E-10 86.3 9.8 81 289-369 25-121 (357)
412 1io0_A Tropomodulin; LRR prote 98.2 4.2E-08 1.4E-12 90.9 -5.1 117 79-195 25-163 (185)
413 2p1m_B Transport inhibitor res 98.1 1.3E-07 4.5E-12 104.1 -4.8 107 66-172 105-221 (594)
414 2ra8_A Uncharacterized protein 98.1 3.8E-07 1.3E-11 93.6 -1.2 127 65-194 171-318 (362)
415 2q83_A YTAA protein; 2635576, 98.0 2.5E-05 8.5E-10 79.3 11.3 141 290-436 38-251 (346)
416 2olc_A MTR kinase, methylthior 98.0 4.2E-05 1.4E-09 79.6 12.7 76 289-366 35-120 (397)
417 4fdw_A Leucine rich hypothetic 97.9 1E-05 3.4E-10 84.4 7.2 123 67-195 227-357 (401)
418 2ra8_A Uncharacterized protein 97.9 1.1E-06 3.9E-11 90.1 -0.5 128 65-195 138-291 (362)
419 2pyw_A Uncharacterized protein 97.9 4E-05 1.4E-09 80.5 10.8 79 406-486 231-313 (420)
420 3f7w_A Putative fructosamine-3 97.8 8.1E-05 2.8E-09 73.7 10.6 79 284-367 15-96 (288)
421 3jr1_A Putative fructosamine-3 97.8 0.00012 4.2E-09 73.2 11.7 140 288-433 40-232 (312)
422 4fdw_A Leucine rich hypothetic 97.7 5E-05 1.7E-09 79.1 7.1 121 67-194 158-282 (401)
423 3e4g_A ATP synthase subunit S, 97.5 8.8E-06 3E-10 73.7 -2.0 82 67-148 62-149 (176)
424 3e4g_A ATP synthase subunit S, 97.4 2E-05 7E-10 71.2 0.3 94 82-175 53-153 (176)
425 3csv_A Aminoglycoside phosphot 97.4 0.00078 2.7E-08 68.0 11.2 144 289-438 23-218 (333)
426 2ppq_A HSK, HK, homoserine kin 97.4 0.00065 2.2E-08 68.2 10.5 160 274-437 7-217 (322)
427 1nw1_A Choline kinase (49.2 KD 97.3 0.0009 3.1E-08 70.2 10.2 73 289-368 78-159 (429)
428 3rfe_A Platelet glycoprotein I 97.2 0.00023 7.9E-09 61.2 4.4 56 70-127 12-68 (130)
429 3dxq_A Choline/ethanolamine ki 97.2 0.0023 8E-08 63.5 12.1 139 289-437 23-202 (301)
430 1zyl_A Hypothetical protein YI 97.1 0.0042 1.4E-07 62.3 13.2 143 290-437 32-223 (328)
431 2qg7_A Ethanolamine kinase PV0 97.0 0.0069 2.4E-07 63.8 13.8 74 289-368 113-188 (458)
432 3feg_A Choline/ethanolamine ki 97.0 0.005 1.7E-07 63.2 12.3 143 289-437 55-254 (379)
433 3rfe_A Platelet glycoprotein I 96.9 0.00097 3.3E-08 57.3 5.5 57 93-151 11-68 (130)
434 1pgv_A TMD-1, tropomodulin TMD 96.9 6.1E-05 2.1E-09 69.5 -2.3 109 66-174 41-169 (197)
435 3c5i_A Choline kinase; choline 96.9 0.0031 1.1E-07 64.6 9.6 74 289-368 38-121 (369)
436 4gt6_A Cell surface protein; l 96.8 0.00094 3.2E-08 69.2 5.5 111 78-193 253-367 (394)
437 4h09_A Hypothetical leucine ri 96.7 0.0028 9.7E-08 65.1 8.1 102 67-171 218-319 (379)
438 3i1a_A Spectinomycin phosphotr 96.7 0.01 3.5E-07 59.9 11.6 32 407-438 206-237 (339)
439 4fs7_A Uncharacterized protein 96.5 0.002 6.7E-08 66.8 4.9 114 67-188 277-390 (394)
440 4fs7_A Uncharacterized protein 96.1 0.01 3.6E-07 61.2 7.9 57 66-124 71-127 (394)
441 4h09_A Hypothetical leucine ri 96.0 0.01 3.5E-07 60.9 7.3 102 67-171 241-342 (379)
442 2yle_A Protein spire homolog 1 96.0 0.033 1.1E-06 51.6 9.6 104 365-488 32-135 (229)
443 1pgv_A TMD-1, tropomodulin TMD 95.8 0.00069 2.4E-08 62.4 -2.4 90 84-173 35-137 (197)
444 3f2s_A CK, chetk-alpha, cholin 95.7 0.039 1.3E-06 56.8 10.0 144 290-437 58-280 (401)
445 4gt6_A Cell surface protein; l 95.6 0.014 4.8E-07 60.3 6.5 105 67-175 266-370 (394)
446 3mes_A Choline kinase; malaria 95.4 0.064 2.2E-06 55.7 10.5 74 289-368 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.9 0.25 8.6E-06 50.9 8.7 30 408-437 245-280 (401)
448 4ann_A ESSB; membrane protein, 90.9 0.67 2.3E-05 42.7 8.0 116 339-490 43-158 (215)
449 4ano_A ESSB; membrane protein, 86.9 1.5 5.2E-05 40.5 7.4 115 339-490 48-163 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 85.4 0.11 3.7E-06 54.8 -1.4 61 288-351 146-214 (463)
451 2ks1_B Epidermal growth factor 76.4 0.11 3.8E-06 34.5 -3.2 24 222-245 13-36 (44)
452 2l2t_A Receptor tyrosine-prote 67.2 0.14 4.9E-06 33.9 -4.3 22 222-243 12-33 (44)
453 2lz0_A Uncharacterized protein 40.1 23 0.00077 28.0 3.5 13 157-169 38-50 (100)
454 2lz0_A Uncharacterized protein 33.8 60 0.002 25.5 5.0 40 107-147 13-52 (100)
455 2k9y_A Ephrin type-A receptor 31.0 1.8 6.2E-05 28.2 -3.7 14 221-234 14-27 (41)
456 3ls8_A Phosphatidylinositol 3- 21.9 5.6E+02 0.019 27.3 11.3 46 384-436 454-501 (614)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2e-55 Score=445.30 Aligned_cols=259 Identities=22% Similarity=0.318 Sum_probs=213.2
Q ss_pred cCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++...+.||+|+||+||+|++. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34556788999999999999973 467899999986665666789999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCC------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007286 358 LVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 425 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 425 (609)
+|||||++|+|.++|....+. ...++|..+.+|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999999999754321 24589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCC-cceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007286 426 EAVVGDFGLAKLVDVRK-TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 426 ~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 503 (609)
.+||+|||+++...... ........||+.|||||++.++.|+.++|||||||++|||+| |+.||..... .
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~ 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------Q 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------H
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------H
Confidence 99999999998765432 223345679999999999999999999999999999999999 8999864321 1
Q ss_pred HHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 504 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 504 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+.......... .+.+...+..+.+++.+||+.||++||||.||++.|+..
T Consensus 255 ~~~~~i~~~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEMIRNRQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHcCCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11222221111 112234456789999999999999999999999999864
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.5e-55 Score=440.15 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=212.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|...+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++..
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 356778899999999999999864 4788999999753 345567899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcC---------CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007286 357 LLVYPFMQNLSVAYRLREIK---------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 427 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 427 (609)
++|||||++|+|.++++... .....++|..+++|+.|||+||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997642 2235699999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHH
Q 007286 428 VVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 428 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 505 (609)
||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +.
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--------~~ 239 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EV 239 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 99999999876543322 2234569999999999999999999999999999999999 89999743211 11
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......... ..+...+.++.+++.+||+.||++||||.||++.|++.
T Consensus 240 ~~~i~~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 240 IECITQGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 2222211111 12223456889999999999999999999999999763
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-54 Score=441.12 Aligned_cols=258 Identities=25% Similarity=0.400 Sum_probs=206.1
Q ss_pred cCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
++|...+.||+|+||+||+|++. +++.||||+++. ......++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45677789999999999999874 478999999975 33455678999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCC-----------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007286 358 LVYPFMQNLSVAYRLREIKPG-----------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 426 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 426 (609)
+|||||++|+|.++++..... ...++|..+++|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 999999999999999864321 24589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHH
Q 007286 427 AVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLD 504 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~ 504 (609)
+||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||...... +
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--------~ 268 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--------E 268 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--------H
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--------H
Confidence 99999999987654332 23345679999999999999999999999999999999999 89999643221 1
Q ss_pred HHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 505 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 505 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.+.......++ ..+...+.++.+|+.+||+.||++||||.||++.|+.+
T Consensus 269 ~~~~i~~g~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 AIDCITQGREL----------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHTCCC----------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCC----------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 11222111111 12223456889999999999999999999999999874
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-53 Score=429.77 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=204.6
Q ss_pred HHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
++..+++...+.||+|+||+||+|+++ ..||||+++... +....+.|.+|++++++++|||||+++|++.+ +..++
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 344567888899999999999999975 369999987433 34456789999999999999999999998864 56899
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.++++.. ...+++..+.+|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+..
T Consensus 109 VmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 99999999999999753 23489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCC-cceeecccccccccCcccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 439 DVRK-TNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 439 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
.... ........||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ..+... .....
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~----~~~~~~---~~~~~- 254 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFM---VGRGY- 254 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHH---HHTTC-
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH----HHHHHH---HhcCC-
Confidence 5332 233445689999999999864 46899999999999999999999999643221 011111 11110
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..+.+ .......+..+.+++.+||+.||++||||.||++.|+.+
T Consensus 255 ----~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 255 ----ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ----CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred ----CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 11111 112234456889999999999999999999999998763
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-53 Score=438.25 Aligned_cols=270 Identities=26% Similarity=0.381 Sum_probs=221.0
Q ss_pred cCHHHHHHHhcCCCccCcccccCCceEEEEEeCC------CcEEEEEEeccCCCCchHHHHHHHHHHHHhccC-CCccee
Q 007286 274 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVH-RNLLRL 346 (609)
Q Consensus 274 ~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l 346 (609)
+...+++...++|+..+.||+|+||+||+|.+.. ++.||||+++........+.|.+|++++.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4556778888999999999999999999999642 468999999876555567789999999999975 899999
Q ss_pred eeEeeCC-CcceEEeecccCchhhhhhhhcCC------------CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007286 347 IGFCTTP-TERLLVYPFMQNLSVAYRLREIKP------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRD 413 (609)
Q Consensus 347 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 413 (609)
+|+|.++ +..++|||||++|+|.++|+.... ....+++..+..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 568999999999999999975321 134589999999999999999999999 999999
Q ss_pred CCCCcEEeCCCCcEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCC
Q 007286 414 VKAANVLLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDF 491 (609)
Q Consensus 414 lkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~ 491 (609)
|||+|||+++++.+||+|||+|+.+..... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999997654333 23445679999999999999999999999999999999998 8999975
Q ss_pred CccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 492 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..... .+.. ......++ ..+...+.++.+++.+||+.||++||||.||+++|+.+
T Consensus 291 ~~~~~----~~~~---~i~~g~~~----------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 291 VKIDE----EFCR---RLKEGTRM----------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CCCSH----HHHH---HHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHHH----HHHH---HHHcCCCC----------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 33211 1111 11111111 11223346789999999999999999999999998763
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-52 Score=427.22 Aligned_cols=251 Identities=20% Similarity=0.329 Sum_probs=203.3
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
++|++.+.||+|+||+||+|++. +|+.||||++.... .....+.|.+|++++++++|||||++++++.+++..++|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57899999999999999999975 69999999997533 33345789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++|+|.+++.... ...+++...+.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999997632 33478889999999999999999999 9999999999999999999999999999876432
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 521 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (609)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||...... +......... .
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~-~------ 242 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--------NLVLKIISGS-F------ 242 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTC-C------
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCC-C------
Confidence 12234567999999999999999999999999999999999999999753321 1111111111 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 522 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 522 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.......+.++.+|+.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 ---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0112233467899999999999999999999986
No 7
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-51 Score=422.54 Aligned_cols=320 Identities=71% Similarity=1.123 Sum_probs=270.1
Q ss_pred cccchhhhhcCcccccCHHHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc
Q 007286 259 AGEVDRRIAFGQLKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA 338 (609)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l 338 (609)
+.+..+....++...+++.+++...++|...+.||+|+||+||+|...+|+.||||++...........+.+|+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l 84 (326)
T 3uim_A 5 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA 84 (326)
T ss_dssp ----------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC
T ss_pred CcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc
Confidence 34445556667788999999999999999999999999999999998889999999997654444445789999999999
Q ss_pred cCCCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007286 339 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 418 (609)
Q Consensus 339 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 418 (609)
+||||+++++++......++||||+++|+|.+++.........+++..+..++.|++.||+|||+.+.++|+||||||+|
T Consensus 85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N 164 (326)
T 3uim_A 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164 (326)
T ss_dssp CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence 99999999999999999999999999999999998876666679999999999999999999999888899999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc
Q 007286 419 VLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED 498 (609)
Q Consensus 419 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~ 498 (609)
|+++.++.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||+||+.||+........
T Consensus 165 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 244 (326)
T 3uim_A 165 ILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244 (326)
T ss_dssp EEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS
T ss_pred EEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc
Confidence 99999999999999999987655555556667999999999998889999999999999999999999999755544555
Q ss_pred chhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccccchhhhhhhhh
Q 007286 499 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAERWEEWQHVEVT 578 (609)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~ 578 (609)
.....+++.............+..+........+..+.+++.+||+.||++|||+.||+++|++....+++++|+..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~~~~ 324 (326)
T 3uim_A 245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMF 324 (326)
T ss_dssp CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC--------
T ss_pred chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHHHhh
Confidence 56677777777777778888888888888899999999999999999999999999999999999999999887665543
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-51 Score=417.87 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=199.8
Q ss_pred cCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHH--HHHHHHHhccCCCcceeeeEeeCCC----cce
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQ--REVEMISVAVHRNLLRLIGFCTTPT----ERL 357 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~--~E~~~l~~l~H~niv~l~~~~~~~~----~~~ 357 (609)
++|...+.||+|+||+||+|++ +|+.||||++... ....+. .|+..+.+++|||||+++|+|.+++ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4567788999999999999998 5899999999642 233444 4555567889999999999997654 468
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEeCCCCcEEEccc
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-----NPKIIHRDVKAANVLLDEDFEAVVGDF 432 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~Df 432 (609)
+||||+++|+|.++++.. .++|..+.+++.|+++||+|||+++ .++||||||||+|||++.++++||+||
T Consensus 78 lV~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999863 3899999999999999999999863 558999999999999999999999999
Q ss_pred ccceeeccCCcce---eecccccccccCcccccCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCccccc------
Q 007286 433 GLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE------ 497 (609)
Q Consensus 433 Gla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~------ 497 (609)
|+|+......... ....+||+.|||||++.+. .++.++|||||||++|||+||+.|+........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 9999876443322 2345799999999999754 467899999999999999999988753221110
Q ss_pred -cchhHHHHHHHHhhhccchhhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 498 -DDVLLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 498 -~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..... .........+ ..++.+... ...+.+..+.+|+.+||+.||++||||.||++.|+.+
T Consensus 233 ~~~~~~-~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 233 PSDPSV-EEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp CSSCCH-HHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccchH-HHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 00011 1111111111 111211111 1235667899999999999999999999999999764
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.8e-51 Score=415.50 Aligned_cols=249 Identities=20% Similarity=0.264 Sum_probs=207.3
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeec
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
+.|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 56888999999999999999975 69999999996432 33456788999999999999999999999999999999999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 442 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 442 (609)
+++|+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999999752 389999999999999999999999 99999999999999999999999999999875432
Q ss_pred cceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhcccc
Q 007286 443 TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 522 (609)
Q Consensus 443 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 522 (609)
......+||+.|||||++.+..|+.++|||||||++|||+||+.||...... +......... .+.
T Consensus 225 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~~------~~~ 289 (346)
T 4fih_A 225 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDNL------PPR 289 (346)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSS------CCC
T ss_pred -CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCC------CCC
Confidence 2344568999999999999999999999999999999999999999643211 1111111110 000
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 523 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 523 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+ ......+.++.+++.+||+.||++|||+.|+++
T Consensus 290 ~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 290 L--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp C--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 111233467899999999999999999999875
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.3e-51 Score=417.76 Aligned_cols=250 Identities=22% Similarity=0.227 Sum_probs=203.6
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeec
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
+.|...++||+|+||+||+|++. +|+.||||+++.... +.+|+.++++++|||||++++++.+++..++||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 46777889999999999999975 699999999974321 24699999999999999999999999999999999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEcccccceeeccC
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKLVDVR 441 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~~~~~ 441 (609)
+++|+|.++++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999998643 389999999999999999999999 999999999999999987 6999999999987543
Q ss_pred Ccc----eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 442 KTN----VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 442 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||....... .. ..+.. .....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----~~-~~i~~--~~~~~-- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----LC-LKIAS--EPPPI-- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----CH-HHHHH--SCCGG--
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----HH-HHHHc--CCCCc--
Confidence 221 1234579999999999999999999999999999999999999997543221 11 11111 00000
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
...+...+..+.+++.+||+.||++|||+.|+++.|..
T Consensus 276 -------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 -------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 01223345678999999999999999999999998865
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-51 Score=410.86 Aligned_cols=247 Identities=23% Similarity=0.396 Sum_probs=196.0
Q ss_pred CccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeC----CCcceEEe
Q 007286 287 SEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTERLLVY 360 (609)
Q Consensus 287 ~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 360 (609)
...+.||+|+||+||+|.+. ++..||||++.... .....+.|.+|++++++++|||||++++++.+ ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45667999999999999975 68899999997433 33445779999999999999999999999854 34578999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeec
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVD 439 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~ 439 (609)
||+++|+|.++++... .+++..+..++.||+.||+|||++ +++|+||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999998643 489999999999999999999998 123999999999999984 7899999999998543
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ............ ...
T Consensus 184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-------~~~~~~i~~~~~-~~~- 250 (290)
T 3fpq_A 184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVK-PAS- 250 (290)
T ss_dssp T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCC-CGG-
T ss_pred C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------HHHHHHHHcCCC-CCC-
Confidence 2 23445689999999999864 6999999999999999999999999643211 111111111111 000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+....+.++.+++.+||+.||++|||+.|+++
T Consensus 251 -------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 -------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11112346889999999999999999999985
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2e-51 Score=413.25 Aligned_cols=248 Identities=21% Similarity=0.283 Sum_probs=208.5
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccC--CCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
++|++.+.||+|+||+||+|++. +|+.||||++.+. ......+.+.+|++++++++|||||++++++.+++..++||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999975 6999999999642 12344678999999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++|+|.+++.... .+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998643 389999999999999999999999 999999999999999999999999999998754
Q ss_pred CC-cceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RK-TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... +........ ..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~-~~---- 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------LIFAKIIKL-EY---- 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 33 23345678999999999999999999999999999999999999999743221 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVV 557 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl 557 (609)
.++...+.++.+++.+|++.||++|||++|++
T Consensus 252 ------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 ------DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ------CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11222346789999999999999999999874
No 13
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=416.44 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=208.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.+.|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 356999999999999999999975 69999999996433 3445678999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
||++|+|.++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 229 y~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 229 FLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp CCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 99999999999752 388999999999999999999999 9999999999999999999999999999977543
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 521 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (609)
. ......+||+.|||||++.+..|+.++|||||||++|||+||+.||...... +........ ..+
T Consensus 301 ~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------~~~~~i~~~------~~~ 365 (423)
T 4fie_A 301 V-PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMIRDN------LPP 365 (423)
T ss_dssp C-CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS------CCC
T ss_pred C-ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcC------CCC
Confidence 2 2344568999999999999999999999999999999999999999643211 111111111 001
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 522 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 522 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.+. .....+.++.+|+.+||+.||++|||+.|+++
T Consensus 366 ~~~--~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 RLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCS--CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11223467899999999999999999999886
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.4e-50 Score=396.87 Aligned_cols=246 Identities=22% Similarity=0.333 Sum_probs=191.1
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
++|++.+.||+|+||+||+|++. +|+.||||++.+.. .......+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999974 69999999996432 2334577999999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+ +|+|.+++... ..++......++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 67999988763 2489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ......... ..
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--------~~~~~i~~~-~~---- 229 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNG-VY---- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 2 22345679999999999988776 58999999999999999999999743221 111111111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.++...+.++.+++.+|++.||++|||+.|+++
T Consensus 230 ------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 ------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111223467899999999999999999999986
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.9e-50 Score=406.20 Aligned_cols=243 Identities=22% Similarity=0.275 Sum_probs=193.9
Q ss_pred cCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
++|++.+.||+|+||+||+|+.. +++.||||+++... .......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999863 47899999986432 12233468899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.+++.... .+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998643 389999999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... +........ ..
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~-~~--- 243 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMILKA-KL--- 243 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC---
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHHcC-CC---
Confidence 4322 2234567999999999999999999999999999999999999999753321 111111111 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
.++...+.++.+++.+||+.||++|||+
T Consensus 244 -------~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 -------GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -------CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1122234678999999999999999985
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.6e-49 Score=400.91 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=189.5
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC--------
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-------- 354 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 354 (609)
++|+..+.||+|+||+||+|++. +|+.||||+++........+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999975 699999999975554455678999999999999999999999886443
Q ss_pred ----cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEc
Q 007286 355 ----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG 430 (609)
Q Consensus 355 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 430 (609)
..++||||+++|+|.+++..... ....++...+.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 25899999999999999976432 22356677889999999999999999 99999999999999999999999
Q ss_pred ccccceeeccCCcc-----------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007286 431 DFGLAKLVDVRKTN-----------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 499 (609)
Q Consensus 431 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 499 (609)
|||+|+.+...... ..+..+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999877543211 1234579999999999999999999999999999999996 664211
Q ss_pred hhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 500 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.......... .... +.........+.+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~~-~~~~---------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDVR-NLKF---------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHHH-TTCC---------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHh-cCCC---------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0001111111 0000 0011233356788999999999999999999986
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.5e-46 Score=380.37 Aligned_cols=283 Identities=39% Similarity=0.640 Sum_probs=240.8
Q ss_pred CHHHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 275 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 275 ~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
++.++...+++|...+.||+|+||+||+|++++|+.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 334455678899999999999999999999988999999988653 3455778999999999999999999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++|+|.+++.........+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976554445689999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCC-cceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 435 AKLVDVRK-TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 435 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
++...... ........||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ......+.......+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~--~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE--MVNLAEWAVESHNNG 263 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS--CCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH--HHHHHHHhhhccccc
Confidence 98754322 222334568999999999988899999999999999999999999997544322 223344544555556
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.+...+++.+........+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 66677777777777889999999999999999999999999999999863
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-46 Score=387.90 Aligned_cols=262 Identities=18% Similarity=0.259 Sum_probs=200.3
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-CchHHHHHHHHHHHHhccCCCcceeeeEeeC------CCc
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTT------PTE 355 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 355 (609)
++|++.+.||+|+||+||+|++. +|+.||||+++.... ....+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 799999999975432 2345678899999999999999999998754 356
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||++ |+|.+++... ..+++..+..++.||+.||.|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 799999996 6788888653 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccC---CcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007286 436 KLVDVR---KTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 511 (609)
Q Consensus 436 ~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (609)
+.+... ........+||+.|||||++.+. .++.++||||+||++|||+||+.||...... .....+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-----~~l~~I~~~~g 280 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-----HQLQLIMMVLG 280 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-----HHHHHHHHHHC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHhcC
Confidence 876432 12234457899999999998775 5699999999999999999999999754321 11111111110
Q ss_pred hccch-----------hhccccc-cCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 512 EKRLD-----------AIVDRNL-NKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 512 ~~~~~-----------~~~d~~l-~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..... ..+.... .... .+..+.++.+|+.+||+.||++|||+.|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0000000 0000 0112357889999999999999999999986
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4e-46 Score=386.24 Aligned_cols=198 Identities=24% Similarity=0.377 Sum_probs=170.8
Q ss_pred HhcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcc
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 356 (609)
..++|++.+.||+|+||+||+|+.+ +++.||||++... .....+.+|++++..+ +|||||++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4678999999999999999999863 4678999998653 2356788999999988 699999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLA 435 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla 435 (609)
++||||+++|+|.+++.. +++.....++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 999999999999999853 78899999999999999999999 99999999999999877 79999999999
Q ss_pred eeeccCCc---------------------------ceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCC
Q 007286 436 KLVDVRKT---------------------------NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQR 487 (609)
Q Consensus 436 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~ 487 (609)
+....... ......+||+.|+|||++.+. .++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86643221 112335799999999999775 58999999999999999999999
Q ss_pred CCCCC
Q 007286 488 AIDFS 492 (609)
Q Consensus 488 p~~~~ 492 (609)
||...
T Consensus 246 Pf~~~ 250 (361)
T 4f9c_A 246 PFYKA 250 (361)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99643
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-44 Score=394.82 Aligned_cols=250 Identities=24% Similarity=0.295 Sum_probs=199.2
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHH---HHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQRE---VEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E---~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|++.++||+|+||+||+|+.. +|+.||||++.+.. .......+.+| +.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 468999999999999999999975 69999999996421 12223334444 5566677899999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||++||+|.+++.... .++......++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||+||+.||....... .......... ..
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~-~~- 410 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLT-MA- 410 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHH-CC-
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcC-CC-
Confidence 765432 334689999999999975 579999999999999999999999997432211 1111111110 00
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~evl~ 558 (609)
..++...+.++.+|+.+|++.||++|++ +.||.+
T Consensus 411 ---------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 ---------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ---------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1112233467899999999999999998 566653
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-44 Score=394.98 Aligned_cols=252 Identities=20% Similarity=0.279 Sum_probs=207.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|++.+.||+|+||.||+|.++ +|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+....++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 368999999999999999999975 69999999986432 3345678899999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC--CcEEEcccccceeec
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED--FEAVVGDFGLAKLVD 439 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DfGla~~~~ 439 (609)
||++|+|.+++... ...+++.....++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 235 ~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999988642 23489999999999999999999999 99999999999999854 899999999999875
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +..........
T Consensus 309 ~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------~~~~~i~~~~~----- 373 (573)
T 3uto_A 309 PKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------ETLRNVKSCDW----- 373 (573)
T ss_dssp TTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC-----
T ss_pred CCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHhCCC-----
Confidence 432 334567999999999999999999999999999999999999999743321 11111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.+........+.++.+|+.+||+.||++|||+.|+++
T Consensus 374 --~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 374 --NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001111123467889999999999999999999987
No 22
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-43 Score=371.18 Aligned_cols=261 Identities=28% Similarity=0.415 Sum_probs=213.3
Q ss_pred HhcCCCccCcccccCCceEEEEEeC--------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT 352 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 352 (609)
..++|.+.+.||+|+||.||+|++. ++..||||+++........+.+.+|+.+++++ +||||+++++++..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 3467888999999999999999862 35679999997654445567899999999999 89999999999999
Q ss_pred CCcceEEeecccCchhhhhhhhcCCC------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007286 353 PTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 420 (609)
Q Consensus 353 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 420 (609)
.+..++||||+++|+|.+++...... ...+++..++.++.||++||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 99999999999999999999864321 23488999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCcccccc
Q 007286 421 LDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEED 498 (609)
Q Consensus 421 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~ 498 (609)
++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-- 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999987654322 22233457889999999999999999999999999999999 999987533211
Q ss_pred chhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 499 DVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+. ....... ....+...+..+.+++.+||+.+|++||++.|+++.|+.+
T Consensus 314 ---~~---~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 314 ---LF---KLLKEGH----------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp ---HH---HHHHTTC----------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HH---HHHhcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11 1111111 1112223446789999999999999999999999999874
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.5e-42 Score=351.66 Aligned_cols=283 Identities=36% Similarity=0.653 Sum_probs=231.7
Q ss_pred cccccCHHHHHHHhcCCCcc------CcccccCCceEEEEEeCCCcEEEEEEeccCC---CCchHHHHHHHHHHHHhccC
Q 007286 270 QLKRYSWRELQLATDNFSEK------NVLGQGGFGKVYRGVLADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVH 340 (609)
Q Consensus 270 ~~~~~~~~el~~~~~~~~~~------~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H 340 (609)
....+++.++..++++|... +.||+|+||+||+|.+ +++.||||++.... .....+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678899999999999877 8999999999999997 58999999986432 23446789999999999999
Q ss_pred CCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007286 341 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 420 (609)
Q Consensus 341 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 420 (609)
|||+++++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999975332 34589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007286 421 LDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 499 (609)
Q Consensus 421 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 499 (609)
++.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||+||+.||........
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-- 242 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-- 242 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--
Confidence 999999999999999876543222 2334578999999998864 589999999999999999999999975443221
Q ss_pred hhHHHHHHHHhh-hccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 500 VLLLDHVKKLER-EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 500 ~~~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...+...... ...+...+++.+ .......+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 243 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 243 --LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp --TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred --HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1122222221 222334444433 335677888999999999999999999999999999874
No 24
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8e-43 Score=355.99 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=210.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||+||+|.+. +++.||+|++.. ......+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 467888999999999999999975 689999999854 334556789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHCC---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 999999999998632 3489999999999999999999999 9999999999999999999999999999876433
Q ss_pred Ccce-------------eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007286 442 KTNV-------------TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 508 (609)
Q Consensus 442 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 508 (609)
.... .....||+.|+|||++.+..++.++||||||+++|||++|..|+................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~--- 238 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG--- 238 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH---
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc---
Confidence 2211 114569999999999999999999999999999999999999986543322111111000
Q ss_pred HhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 509 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 509 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
..+.. .....+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 239 ---------~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 239 ---------FLDRY----CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---------HHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------ccccc----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00000 11122346889999999999999999999999998753
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=362.55 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=209.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
.++|.+.+.||+|+||+||+|.+. .+..||||+++........+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467888999999999999999974 3556999999765555566789999999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.++++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999999753 23489999999999999999999999 9999999999999999999999999999977
Q ss_pred ccCCcc--eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 439 DVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 439 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
...... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~~~~~~~-- 271 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVISSVEEGY-- 271 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHHHHHTTC--
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHcCC--
Confidence 543222 2223456788999999998899999999999999999999 99998643221 1111111111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus 272 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 272 --------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1112223446889999999999999999999999999874
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.8e-44 Score=374.61 Aligned_cols=259 Identities=27% Similarity=0.376 Sum_probs=210.9
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
...++|...+.||+|+||.||+|.+. +++.||||+++..........|.+|++++++++||||+++++++...+..++|
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 34567888999999999999999986 78999999997544444456788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.++++... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 191 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999997632 3488999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCccee-ecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 440 VRKTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 440 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
....... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... +.........+
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~~~~~~~~~~~--- 333 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------QTREFVEKGGR--- 333 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------HHHHHHHTTCC---
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC---
Confidence 3221111 12235778999999998899999999999999999999 99998643211 11111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...+...+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 334 -------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 334 -------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111222346789999999999999999999999999874
No 27
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.5e-43 Score=361.15 Aligned_cols=264 Identities=26% Similarity=0.401 Sum_probs=204.8
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 355 (609)
.+++...++|++.+.||+|+||+||+|++ +|+.||||++.... .....+.|.+|++++++++||||+++++++.....
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 44455667899999999999999999988 58999999987543 23345678999999999999999999999999999
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEcccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAVVGDFG 433 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfG 433 (609)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred eEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 9999999999999999975321 22388999999999999999999999 8 9999999999999999999999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
+++...... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... +.........
T Consensus 185 ~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~ 255 (309)
T 3p86_A 185 LSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------QVVAAVGFKC 255 (309)
T ss_dssp ------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHHHSC
T ss_pred CCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcC
Confidence 998654322 2233456999999999999999999999999999999999999999643221 1111111000
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
. ........+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 256 ~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 256 K---------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp C---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 0112223346789999999999999999999999999874
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.9e-43 Score=348.59 Aligned_cols=257 Identities=24% Similarity=0.370 Sum_probs=213.9
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
..++|...+.||+|+||.||+|.+.++..||||+++... ...+++.+|++++.+++||||+++++++......++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 457888999999999999999999888899999997532 345779999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|.+++.... ..+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 999999999997642 3488999999999999999999999 9999999999999999999999999999877654
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhcc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 520 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 520 (609)
.........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||+..... ...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~~------ 223 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--------EVVLKVSQGHR------ 223 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTCC------
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--------HHHHHHHcCCC------
Confidence 4444444567788999999998899999999999999999999 99998643321 11111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 521 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 521 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...+...+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus 224 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 224 ----LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp ----CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred ----CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0011122357899999999999999999999999998864
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=359.84 Aligned_cols=251 Identities=21% Similarity=0.271 Sum_probs=198.9
Q ss_pred HhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|.+.+.||+|+||+||+|.+ .+|+.||||++...........+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999997 4799999999976544444567899999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997643 389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
..........||+.|+|||.+.+..+ +.++|||||||++|||+||+.||+..... ......... ..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~---- 227 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--------ALYKKIMRG-KY---- 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-CC----
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 44334455679999999999988775 89999999999999999999999743221 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 ------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 011123356789999999999999999999986
No 30
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.3e-43 Score=369.24 Aligned_cols=258 Identities=26% Similarity=0.405 Sum_probs=200.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
..++|...+.||+|+||.||+|++. ++..||||+++........+.|.+|+.++++++||||+++++++......+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3467899999999999999999975 577899999976544555678999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|.++++.. ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999999753 23489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 438 VDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 438 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... +........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~~~~i~~~-- 266 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DVIKAVDEG-- 266 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HHHHHHHTT--
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcC--
Confidence 65432221 122345778999999999999999999999999999998 99998643211 111111111
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.........+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus 267 --------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 267 --------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp --------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 11112223456889999999999999999999999999875
No 31
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-43 Score=365.20 Aligned_cols=266 Identities=24% Similarity=0.376 Sum_probs=212.5
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEee
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 351 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 351 (609)
++...++|...+.||+|+||.||+|.+ .++..||||+++........+.+.+|+.++.++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345668899999999999999999996 246689999997654455567899999999999 8999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCC-------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPG-------------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHR 412 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 412 (609)
..+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999764321 13478999999999999999999999 99999
Q ss_pred CCCCCcEEeCCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCC
Q 007286 413 DVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAID 490 (609)
Q Consensus 413 Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~ 490 (609)
||||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543322 2334567889999999999999999999999999999998 999997
Q ss_pred CCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 491 FSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...... ..... .. .. .........+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 277 ~~~~~~----~~~~~---~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 277 GIPVDA----NFYKL---IQ-NG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp TCCCSH----HHHHH---HH-TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCcHH----HHHHH---Hh-cC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 543211 11111 11 11 111112223467899999999999999999999999998753
No 32
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.8e-43 Score=368.40 Aligned_cols=271 Identities=26% Similarity=0.382 Sum_probs=217.6
Q ss_pred ccCHHHHHHHhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcce
Q 007286 273 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLR 345 (609)
Q Consensus 273 ~~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~ 345 (609)
.+...+++...++|.+.+.||+|+||.||+|.+ .+++.||||+++........+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345667778889999999999999999999984 246889999997655555567899999999999 7999999
Q ss_pred eeeEeeCCCc-ceEEeecccCchhhhhhhhcCCC----------------------------------------------
Q 007286 346 LIGFCTTPTE-RLLVYPFMQNLSVAYRLREIKPG---------------------------------------------- 378 (609)
Q Consensus 346 l~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------- 378 (609)
+++++...+. .++||||+++|+|.++++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 88999999999999999764321
Q ss_pred ----------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007286 379 ----------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 442 (609)
Q Consensus 379 ----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 442 (609)
...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12288999999999999999999999 99999999999999999999999999998664332
Q ss_pred c-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhcc
Q 007286 443 T-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 520 (609)
Q Consensus 443 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 520 (609)
. .......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ..... ......
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----~~~~~---~~~~~~------ 314 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRR---LKEGTR------ 314 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----HHHHH---HHHTCC------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----HHHHH---HHcCCC------
Confidence 2 23344568999999999999999999999999999999999 999997543221 11111 111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 521 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 521 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......+..+.+++.+||+.||++|||+.|++++|+..
T Consensus 315 ----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 315 ----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 111122345789999999999999999999999999874
No 33
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.2e-43 Score=350.44 Aligned_cols=256 Identities=25% Similarity=0.395 Sum_probs=212.0
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
..++|...+.||+|+||+||+|.+.+++.||+|++... ....+++.+|++++++++||||+++++++.+....++|||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 34678889999999999999999988999999999743 2345789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHhcC---cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 999999999997532 3489999999999999999999999 9999999999999999999999999999866443
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhcc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 520 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 520 (609)
.........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--------~~~~~~~~~~------- 224 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGF------- 224 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTC-------
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHhcCc-------
Confidence 3333334557888999999998999999999999999999999 99998643221 1111111110
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 521 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 521 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
....+...+..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 225 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 225 ---RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 0111122346789999999999999999999999999874
No 34
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-42 Score=352.08 Aligned_cols=250 Identities=20% Similarity=0.301 Sum_probs=207.0
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46799999999999999999996 478999999986433 3346778999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999763 378899999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 521 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (609)
.. ......||+.|+|||.+.+..++.++|||||||++|||+||+.||...... ............ .
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~-~---- 235 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--------RALYLIATNGTP-E---- 235 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHHCSC-C----
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC-C----
Confidence 32 234457999999999999999999999999999999999999999643221 111111111110 0
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 522 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 522 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 ---LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ---CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0112233467899999999999999999999986
No 35
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-43 Score=366.84 Aligned_cols=262 Identities=29% Similarity=0.398 Sum_probs=214.8
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC--------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEee
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 351 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 351 (609)
...++|.+.+.||+|+||+||+|++. ++..||||+++..........+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34578888999999999999999962 34679999997655555567899999999999 8999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCC------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 419 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 419 (609)
..+..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 999999999999999999999875421 24589999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEE 497 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~ 497 (609)
|++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-- 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999987654322 22334567889999999999999999999999999999999 99998643221
Q ss_pred cchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 498 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+.......... .......+..+.+++.+||+.+|++|||+.||++.|+..
T Consensus 301 ------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 301 ------ELFKLLKEGHR----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp ------HHHHHHHTTCC----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HHHHHHHcCCC----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11111111111 111222346789999999999999999999999999875
No 36
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-42 Score=377.37 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=214.8
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCC-CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
...++|...+.||+|+||.||+|.+.. +..||||+++.. ....+.|.+|+.++++++||||++++++|......++|
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 345678889999999999999999864 889999999753 23467899999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.++++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 295 ~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999998643 23488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
...........+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... .+.. .....
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-----~~~~---~~~~~------ 435 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYE---LLEKD------ 435 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHH---HHHTT------
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH---HHHcC------
Confidence 433333334456789999999998999999999999999999999 99998653321 1111 11111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
.........+..+.+++.+||+.+|++|||+.+|++.|+...
T Consensus 436 ----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 436 ----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111122334468899999999999999999999999999864
No 37
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.2e-43 Score=365.87 Aligned_cols=260 Identities=27% Similarity=0.380 Sum_probs=211.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|...+.||+|+||+||+|.+. +++.||||+++..........+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999953 46789999997655556667899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCC---CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEc
Q 007286 357 LLVYPFMQNLSVAYRLREIKP---GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVG 430 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 430 (609)
++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999987542 224589999999999999999999999 999999999999999554 59999
Q ss_pred ccccceeeccC-CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHH
Q 007286 431 DFGLAKLVDVR-KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKK 508 (609)
Q Consensus 431 DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 508 (609)
|||+++..... .........||+.|+|||.+.+..++.++|||||||++|||+| |+.||...... +....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--------~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH
Confidence 99999865322 2222334568999999999999999999999999999999998 99998643221 11111
Q ss_pred HhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 509 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 509 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...... .......+..+.+++.+||+.+|++|||+.+|++.|+..
T Consensus 299 i~~~~~----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 299 VTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp HHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHcCCC----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111111 111223345789999999999999999999999999874
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-42 Score=351.12 Aligned_cols=261 Identities=22% Similarity=0.295 Sum_probs=206.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|++. +++.||+|++..... ....+.|.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467899999999999999999975 689999999864322 23346789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999997643 389999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
...........||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ......... ....
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~-~~~~-- 231 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV--------SIAIKHIQD-SVPN-- 231 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH--------HHHHHHHSS-CCCC--
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhhc-cCCC--
Confidence 44433444567999999999999999999999999999999999999999753321 111111110 0000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-AMSEVVRMLEGEG 564 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~evl~~L~~~~ 564 (609)
.........+..+.+++.+|++.||++|| +++++.+.|+...
T Consensus 232 ---~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 232 ---VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp ---HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred ---cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 00011222346789999999999999998 8999999998753
No 39
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-43 Score=362.53 Aligned_cols=266 Identities=24% Similarity=0.402 Sum_probs=215.8
Q ss_pred HHHHHhcCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee
Q 007286 278 ELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT 351 (609)
Q Consensus 278 el~~~~~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 351 (609)
.+....++|...+.||+|+||.||+|.+. +++.||||+++........+.|.+|+.++++++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34456788999999999999999999974 348899999976555555678999999999999999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCC--------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPG--------------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIH 411 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 411 (609)
..+..++||||+++|+|.+++...... ...+++..++.++.|+++||.|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999864321 24589999999999999999999999 9999
Q ss_pred cCCCCCcEEeCCCCcEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCC
Q 007286 412 RDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAI 489 (609)
Q Consensus 412 ~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~ 489 (609)
|||||+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999986643222 22334568899999999998999999999999999999999 99998
Q ss_pred CCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 490 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...... +........ .. ...+...+..+.+++.+||+.+|++||++.++++.|++..
T Consensus 278 ~~~~~~--------~~~~~~~~~-~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 278 YGMAHE--------EVIYYVRDG-NI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTSCHH--------HHHHHHHTT-CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCChH--------HHHHHHhCC-Cc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 643211 111111111 11 0112233467899999999999999999999999998853
No 40
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-42 Score=354.33 Aligned_cols=262 Identities=28% Similarity=0.398 Sum_probs=214.6
Q ss_pred HHhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
...++|...+.||+|+||.||+|.+ .+++.||||+++........+.+.+|++++++++||||+++++++...+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3467888999999999999999986 2458899999976555555678999999999999999999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCC--------------------CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKP--------------------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV 414 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 414 (609)
..++||||+++|+|.+++..... ....+++..++.++.|+++||.|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999986433 123488999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCC
Q 007286 415 KAANVLLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFS 492 (609)
Q Consensus 415 kp~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~ 492 (609)
||+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999877543322 2233457889999999998899999999999999999999 99998754
Q ss_pred ccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 493 RLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.... .... ..... ........+..+.+++.+||+.||++||++.++++.|++.
T Consensus 257 ~~~~-----~~~~---~~~~~----------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 257 PPER-----LFNL---LKTGH----------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CGGG-----HHHH---HHTTC----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHH-----HHHH---hhcCC----------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3211 1111 11110 1112223346789999999999999999999999999874
No 41
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=349.09 Aligned_cols=274 Identities=18% Similarity=0.216 Sum_probs=216.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC--cceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--ERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv 359 (609)
.++|.+.+.||+|+||+||+|.+. +|+.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367889999999999999999976 589999999976544455678899999999999999999999987665 67899
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEcccccc
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGLA 435 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla 435 (609)
|||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999986432 23389999999999999999999999 99999999999999 88889999999999
Q ss_pred eeeccCCcceeecccccccccCccccc--------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLS--------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
+....... .....||+.|+|||++. +..++.++|||||||++|||+||+.||..................
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 87654322 23456999999999986 578899999999999999999999999654333222222222211
Q ss_pred HHhhhccchhhc---------ccc--ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 508 KLEREKRLDAIV---------DRN--LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 508 ~~~~~~~~~~~~---------d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
. ........+. .+. ............+.+++.+||+.||++|||+.|+++...+.
T Consensus 242 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 G-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp H-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred C-CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1 1111100000 001 11234577888999999999999999999999999988774
No 42
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-42 Score=357.92 Aligned_cols=256 Identities=25% Similarity=0.399 Sum_probs=201.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCc----EEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++|+..+.||+|+||+||+|++. +|+ +||+|.++........+.|.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467888999999999999999964 344 468888876555566788999999999999999999999998754 78
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+|++|+++|+|.+++.... ..+++..++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 8999999999999998643 3489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 438 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 438 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
....... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||+...... .... ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~---~~~~--- 235 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSI---LEKG--- 235 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHH---HHTT---
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----HHHH---HHcC---
Confidence 6543322 2233457889999999999999999999999999999999 999997543211 1111 1111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.........+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 236 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 236 -------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp -------CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11112223446789999999999999999999999999875
No 43
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-41 Score=347.54 Aligned_cols=262 Identities=20% Similarity=0.259 Sum_probs=213.0
Q ss_pred cccCHHHHHHHhcC----------CCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccC
Q 007286 272 KRYSWRELQLATDN----------FSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH 340 (609)
Q Consensus 272 ~~~~~~el~~~~~~----------~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H 340 (609)
..++++++..+++. |...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 45677787777764 666778999999999999976 79999999986433 4456789999999999999
Q ss_pred CCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEE
Q 007286 341 RNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVL 420 (609)
Q Consensus 341 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 420 (609)
|||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999998864 2389999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007286 421 LDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 500 (609)
Q Consensus 421 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~ 500 (609)
++.++.+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||+||+.||......
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~----- 247 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV----- 247 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----
Confidence 99999999999999987654322 234457999999999999999999999999999999999999999643211
Q ss_pred hHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 501 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
+......... .+.+. .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ---~~~~~~~~~~------~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 ---QAMKRLRDSP------PPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ---HHHHHHHHSS------CCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---HHHHHHhcCC------CCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111110 00000 011234578899999999999999999999863
No 44
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.6e-43 Score=376.09 Aligned_cols=259 Identities=24% Similarity=0.388 Sum_probs=212.2
Q ss_pred HHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
+...++|...+.||+|+||+||+|.+.++..||||+++.. ....+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC--CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 4456788889999999999999999988999999999753 235788999999999999999999999986 5678999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.++++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 261 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp ECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999997532 12378889999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
...........+|+.|+|||++....++.++|||||||++|||+| |+.||...... +.........++
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~~--- 404 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIRALERGYRM--- 404 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHHTCCC---
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCC---
Confidence 322222233456789999999998999999999999999999999 99998643211 111222211111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
..+...+..+.+++.+||+.||++|||+.+|++.|++..
T Consensus 405 -------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 405 -------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 112234467899999999999999999999999999863
No 45
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-42 Score=350.44 Aligned_cols=260 Identities=24% Similarity=0.377 Sum_probs=203.1
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHh--ccCCCcceeeeEeeC----CCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFCTT----PTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~----~~~~ 356 (609)
.++|...+.||+|+||+||+|++ +|+.||||++.. .....+..|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 56899999999999999999998 689999999863 345667778888776 789999999998644 3457
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcEE
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 428 (609)
++||||+++|+|.++++. ..+++..+++++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 899999999999999964 24899999999999999999999 77 999999999999999999999
Q ss_pred EcccccceeeccCCcce---eecccccccccCcccccCC------CCCcchhhHHHHHHHHHHHhC----------CCCC
Q 007286 429 VGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTG----------QRAI 489 (609)
Q Consensus 429 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg----------~~p~ 489 (609)
|+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998765443322 2234799999999999876 456799999999999999999 7777
Q ss_pred CCCccccccchhHHHHHHHHhhhccchhhcccccc-CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 490 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLN-KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
......... ............. .+.+. .......+..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 234 ~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPS---FEDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCC---HHHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcc---hhhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 543222111 1111111111111 11111 112335678899999999999999999999999999863
No 46
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.5e-42 Score=349.09 Aligned_cols=257 Identities=20% Similarity=0.338 Sum_probs=209.4
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
...++|...+.||+|+||+||+|.+.++..||||+++.. ....+++.+|++++.+++||||+++++++.+.+..++||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 456788999999999999999999998889999999743 234578999999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 99 EYMANGCLLNYLREMR---HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCCTTCBHHHHHHCGG---GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999999997632 2389999999999999999999999 999999999999999999999999999986644
Q ss_pred CCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
..........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..........
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~------ 238 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAEHIAQGL------ 238 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--------HHHHHHHTTC------
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--------HHHHHHhccc------
Confidence 33223334457888999999998899999999999999999999 99998643321 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........+..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 239 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 239 ----RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp ----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 0111122236789999999999999999999999999874
No 47
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.7e-42 Score=348.38 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=199.1
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCC----CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
...++|...+.||+|+||.||+|.+.. +..||+|++.........+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 345788999999999999999999743 45799999876555555678999999999999999999999984 5678
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 89999999999999997632 3489999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
..............+|+.|+|||.+.+..++.++||||||+++|||+| |..||....... . .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-----~---~~~i~~~~~- 235 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-----V---IGRIENGER- 235 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----H---HHHHHTTCC-
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-----H---HHHHHcCCC-
Confidence 775443333344557889999999998999999999999999999997 999987533211 1 111111111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 236 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 236 ---------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999873
No 48
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.9e-42 Score=351.97 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=206.8
Q ss_pred HhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|...+.||+|+||.||+|.+ .+|+.||||++.... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346799999999999999999997 579999999996532 334456788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++.... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp ECCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999997643 388999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeecccccccccCcccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSS-ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.. .......||+.|+|||.+.+..+. .++|||||||++|||+||+.||+..... ......... .
T Consensus 166 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~-~---- 230 (328)
T 3fe3_A 166 VG--GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--------ELRERVLRG-K---- 230 (328)
T ss_dssp SS--CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-C----
T ss_pred CC--CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-C----
Confidence 32 223456799999999999888765 8999999999999999999999754321 111111111 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
. ..+...+..+.+++.+|++.||++|||+.|+++.
T Consensus 231 ----~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ----Y--RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----C--CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----C--CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0111234578899999999999999999999863
No 49
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-42 Score=354.91 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=203.2
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|++.+.||+|+||+||+|.+. +++.||||++.........+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999976 7899999998654444445778999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 99999999998652 3489999999999999999999999 9999999999999999999999999999876433
Q ss_pred Cc-ceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 442 KT-NVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 442 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. .......||+.|+|||++.+..+ +.++|||||||++|||+||+.||........ ....+ ......
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~~~----~~~~~~---- 227 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDW----KEKKTY---- 227 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH---HHHHH----HTTCTT----
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHH----hccccc----
Confidence 22 22335679999999999987775 7899999999999999999999975432211 11111 100000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.......+..+.+++.+|++.||++|||+.|+++.
T Consensus 228 -----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 -----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00112234578899999999999999999999863
No 50
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-42 Score=354.74 Aligned_cols=269 Identities=28% Similarity=0.306 Sum_probs=207.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc----ce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----RL 357 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~ 357 (609)
..++|+..+.||+|+||+||+|++. ++.||||++... ......+..|+.++++++||||+++++++..... .+
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 4568899999999999999999985 799999999642 2234556678888999999999999999976543 69
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCcEEeCCCCcEEEc
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-------NPKIIHRDVKAANVLLDEDFEAVVG 430 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~kl~ 430 (609)
+||||+++|+|.++++.. .+++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999762 3899999999999999999999862 3489999999999999999999999
Q ss_pred ccccceeeccCCcc-eeecccccccccCcccccCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch----
Q 007286 431 DFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTG-----KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV---- 500 (609)
Q Consensus 431 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~---- 500 (609)
|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 99999877543322 23345799999999999763 456789999999999999999999975433211100
Q ss_pred ----hHHHHHHHHhhhccchhhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 501 ----LLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 501 ----~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
......... ..... .+.+... .....+..+.+++.+||+.||++|||+.||++.|+.+
T Consensus 254 ~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 254 GQHPSLEDMQEVV-VHKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp CSSCCHHHHHHHH-TTSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCchhhhhhhh-hcccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011111111 01111 1111110 1234567799999999999999999999999999874
No 51
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.7e-42 Score=351.28 Aligned_cols=263 Identities=25% Similarity=0.374 Sum_probs=214.3
Q ss_pred HHhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCC
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTP 353 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 353 (609)
...++|...+.||+|+||+||+|.+ .+++.||||+++........+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 4457889999999999999999985 256889999997655445567899999999999 899999999999999
Q ss_pred CcceEEeecccCchhhhhhhhcCCC--------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPG--------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 419 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 419 (609)
+..++||||+++|+|.+++...... ...+++..++.++.|+++||.|||++ +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 9999999999999999999864321 23489999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEE 497 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~ 497 (609)
+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 9999999999999999876543322 2234557889999999999999999999999999999999 999986543211
Q ss_pred cchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 498 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
....... .. .........+..+.+++.+|++.||++|||+.|+++.|++.
T Consensus 256 ---~~~~~~~---~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 256 ---KFYKMIK---EG----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp ---HHHHHHH---HT----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHHHhc---cC----------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 1111111 00 01111222346789999999999999999999999999873
No 52
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.4e-41 Score=348.25 Aligned_cols=259 Identities=17% Similarity=0.168 Sum_probs=207.6
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|...+.||+|+||+||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 46788999999999999999996 4789999999864322 34688999999999 8999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEcccccc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-----AVVGDFGLA 435 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGla 435 (609)
||+ +++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 99999999864 23589999999999999999999999 9999999999999999887 999999999
Q ss_pred eeeccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007286 436 KLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 509 (609)
Q Consensus 436 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 509 (609)
+.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~~~i~~~ 235 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERYQKIGDT 235 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHHHHHHhh
Confidence 976543221 12356799999999999999999999999999999999999999975432211 1111111111
Q ss_pred hhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 510 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 510 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........ +. ...+ .+.+++..||+.+|++||++.+|.+.|++.
T Consensus 236 ~~~~~~~~-----~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 236 KRATPIEV-----LC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHSCHHH-----HT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccCCHHH-----Hh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 11111000 00 0112 789999999999999999999999999864
No 53
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-42 Score=350.55 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=216.6
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
++...++|...+.||+|+||+||+|.+. ++..||+|.+... ....+.+.+|++++++++||||+++++++......+
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC--STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 3446678999999999999999999986 4889999999642 345678999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 86 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 9999999999999997643 24489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
.............+|+.|+|||.+.+..++.++||||||+++|+|+| |..||....... ... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----~~~---~~~~----- 227 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----VYE---LLEK----- 227 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HHH---HHHT-----
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHH---HHhc-----
Confidence 76554444455567889999999998999999999999999999999 999986533211 111 1111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..........+..+.+++.+|++.||++|||+.++++.|+..
T Consensus 228 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 228 -----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp -----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 111112223346789999999999999999999999999874
No 54
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.4e-42 Score=370.79 Aligned_cols=258 Identities=26% Similarity=0.383 Sum_probs=205.8
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
...++|...+.||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.. +..++||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 3456788899999999999999999888899999997532 345789999999999999999999999876 6789999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999997532 23478999999999999999999999 999999999999999999999999999987654
Q ss_pred CCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
..........+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... +.........+
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~----- 399 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYR----- 399 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC-----
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC-----
Confidence 33333334557889999999999999999999999999999999 99998643211 11112211111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...+...+..+.+++.+||+.+|++|||+.+|++.|++..
T Consensus 400 -----~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 400 -----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1122334568899999999999999999999999998853
No 55
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.9e-42 Score=349.23 Aligned_cols=265 Identities=23% Similarity=0.302 Sum_probs=202.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|+..+.||+|+||+||+|.+.+|+.||+|++.... .......+.+|++++++++||||+++++++.+....++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346889999999999999999999889999999996432 2334577899999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++ +|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 777777653 23488999999999999999999999 999999999999999999999999999987653
Q ss_pred CCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--ccchh
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--KRLDA 517 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 517 (609)
... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........ +.......... .....
T Consensus 172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ----LPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH----HHHHHHHHCCCCTTTSGG
T ss_pred Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHHHHCCCChHHhhh
Confidence 322 2334568999999999876 5689999999999999999999999975432211 11111111000 00000
Q ss_pred ------hcccccc--CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 ------IVDRNLN--KN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ------~~d~~l~--~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..+.... .. ..+....++.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 00 01123357889999999999999999999986
No 56
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=9.7e-43 Score=359.02 Aligned_cols=265 Identities=25% Similarity=0.362 Sum_probs=213.4
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeCC------CcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEee
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 351 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 351 (609)
++...++|...+.||+|+||+||+|.+.. +..||+|.+.........+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 44566889999999999999999999742 3489999997655555667899999999999 8999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCC----------CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKP----------GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 421 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 421 (609)
..+..++||||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999975321 123478999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccc
Q 007286 422 DEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDD 499 (609)
Q Consensus 422 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~ 499 (609)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||.......
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 274 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--- 274 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---
Confidence 99999999999999876443322 2334557889999999999999999999999999999999 899986433211
Q ss_pred hhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 500 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
....... .. .........+..+.+++.+||+.+|++|||+.+|++.|+..
T Consensus 275 -~~~~~~~----~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 275 -KFYKLVK----DG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp -HHHHHHH----HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHHHh----cC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 1111111 11 00111122246789999999999999999999999999873
No 57
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1e-41 Score=365.78 Aligned_cols=252 Identities=28% Similarity=0.388 Sum_probs=207.2
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC-cceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-ERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv 359 (609)
...++|...+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|++++++++||||+++++++.... ..++|
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 34567888999999999999999985 7899999997532 4578999999999999999999999987665 68999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.++++... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 266 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999998643 23478899999999999999999999 99999999999999999999999999998543
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.. .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... . ........+
T Consensus 341 ~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-----~---~~~i~~~~~---- 404 (450)
T 1k9a_A 341 ST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----V---VPRVEKGYK---- 404 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-----H---HHHHHTTCC----
T ss_pred cc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----H---HHHHHcCCC----
Confidence 22 122357889999999999999999999999999999999 999987543211 1 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 405 ------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 405 ------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 112233456889999999999999999999999999874
No 58
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.5e-41 Score=341.55 Aligned_cols=261 Identities=15% Similarity=0.176 Sum_probs=209.3
Q ss_pred HhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.++..+ +|+|++++++++......++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 346789999999999999999996 579999999986433 234678899999999 799999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-----EEEccccc
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-----AVVGDFGL 434 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DfGl 434 (609)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEec-CCCHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 9999 999999998642 3489999999999999999999999 9999999999999987776 99999999
Q ss_pred ceeeccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007286 435 AKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 508 (609)
Q Consensus 435 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 508 (609)
++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||........ ......+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 235 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN--KQKYERIGE 235 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH--HHHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc--HHHHHHHHh
Confidence 9877543321 23445799999999999999999999999999999999999999975432211 111111111
Q ss_pred HhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 509 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 509 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......... ....+..+.+++.+||+.+|++||++.+|++.|++.
T Consensus 236 ~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 236 KKQSTPLREL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp HHHHSCHHHH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred hccCccHHHH---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 1111111111 112236789999999999999999999999999873
No 59
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.1e-42 Score=353.28 Aligned_cols=262 Identities=27% Similarity=0.411 Sum_probs=212.8
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC--------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEee
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCT 351 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~ 351 (609)
...++|...+.||+|+||.||+|.+. ++..||||+++........+.+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 35678999999999999999999863 46789999997655555567899999999999 8999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCC------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 419 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 419 (609)
..+..++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 999999999999999999999864321 23488999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEE 497 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~ 497 (609)
+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 9999999999999999877543322 2233457889999999988889999999999999999999 99998643221
Q ss_pred cchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 498 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+.......... .......+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 267 ------~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 267 ------ELFKLLKEGHR----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp ------HHHHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------HHHHHHhcCCC----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111111110 111223346789999999999999999999999999875
No 60
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=7.2e-42 Score=351.85 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=200.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE------ 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 355 (609)
.++|+..+.||+|+||.||+|++. +|+.||||+++........+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999986 7999999999765555667889999999999999999999998854432
Q ss_pred ---------------------------------------------------ceEEeecccCchhhhhhhhcCCCCCCccH
Q 007286 356 ---------------------------------------------------RLLVYPFMQNLSVAYRLREIKPGEPVLDW 384 (609)
Q Consensus 356 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 384 (609)
.++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 6899999999999999986432 233567
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc-----------ceeecccccc
Q 007286 385 VTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT-----------NVTTQVRGTM 453 (609)
Q Consensus 385 ~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 453 (609)
..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77899999999999999999 999999999999999999999999999988754321 1223456999
Q ss_pred cccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHH
Q 007286 454 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVE 533 (609)
Q Consensus 454 ~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 533 (609)
.|+|||.+.+..++.++|||||||++|||+||..|+.. ......... .... +........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~~~~~-~~~~---------~~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRIITDVR-NLKF---------PLLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHHHHHH-TTCC---------CHHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHHHHhh-ccCC---------CcccccCCh
Confidence 99999999999999999999999999999998766420 000111110 0000 011223446
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 534 TMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 534 ~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.+.+++.+||+.||++|||+.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 7789999999999999999999986
No 61
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.6e-42 Score=348.53 Aligned_cols=266 Identities=23% Similarity=0.361 Sum_probs=205.1
Q ss_pred HhcCCCccCcccccCCceEEEEEe-----CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC--C
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--T 354 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~ 354 (609)
..++|+..+.||+|+||+||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 356788999999999999999985 26889999999643 334457899999999999999999999998543 5
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 5899999999999999997642 3488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCc--ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc-------ccchhHHHH
Q 007286 435 AKLVDVRKT--NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE-------EDDVLLLDH 505 (609)
Q Consensus 435 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 505 (609)
++....... .......++..|+|||.+.+..++.++||||||+++|||+||..|+....... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 12233457788999999999999999999999999999999999986432110 000000000
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.. +.+............+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 241 ~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 241 LI---------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HH---------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HH---------HHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 00 11111111122334457899999999999999999999999999874
No 62
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.2e-41 Score=341.23 Aligned_cols=254 Identities=28% Similarity=0.484 Sum_probs=203.3
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchH------HHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGD------AAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
..++|...+.||+|+||+||+|.+. +++.||||++......... +.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3467888999999999999999974 7899999998643322221 67899999999999999999999986554
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCc-----E
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFE-----A 427 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~ 427 (609)
++||||+++|+|.+.+... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +
T Consensus 97 --~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~ 168 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCA 168 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred --eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeE
Confidence 7999999999998888653 23589999999999999999999999 8 999999999999988776 9
Q ss_pred EEcccccceeeccCCcceeecccccccccCcccc--cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 428 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL--STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 428 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
||+|||+++.... ......||+.|+|||.+ ....++.++||||||+++|||+||+.||....... . ..
T Consensus 169 kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~---~~ 238 (287)
T 4f0f_A 169 KVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---I---KF 238 (287)
T ss_dssp EECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---H---HH
T ss_pred EeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---H---HH
Confidence 9999999975432 23445789999999998 34567899999999999999999999997433211 0 11
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
...... ...........+..+.+++.+||+.||++|||+.++++.|++
T Consensus 239 ~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 239 INMIRE---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHH---------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHhc---------cCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111111 111112223345688999999999999999999999999976
No 63
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-41 Score=353.73 Aligned_cols=252 Identities=20% Similarity=0.247 Sum_probs=205.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-----chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.+.|.+.+.||+|+||.||+|... +|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999976 6899999999754322 2357899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 432 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 432 (609)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999753 3489999999999999999999999 999999999999998877 7999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .........
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--------~~~~~i~~~ 233 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITAV 233 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTT
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhc
Confidence 9998765432 234457999999999999989999999999999999999999999643211 111111110
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. . -.++.. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~-~--~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 S-Y--DFDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp C-C--CCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred C-C--CCCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 0 000000 0122357889999999999999999999885
No 64
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1e-41 Score=340.67 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=195.9
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCC---CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES---PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|+..+.||+|+||.||+|.+. |+.||||+++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999985 89999999864322 23357889999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--------CCcEEEcc
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--------DFEAVVGD 431 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~D 431 (609)
|||+++++|.+++.. ..+++..++.++.|++.||.|||++...+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999998853 24889999999999999999999992112999999999999986 77899999
Q ss_pred cccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007286 432 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 511 (609)
Q Consensus 432 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (609)
||+++...... .....||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~- 227 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL--------AVAYGVA- 227 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHHHHH-
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHhhh-
Confidence 99998654322 22346899999999999999999999999999999999999999643211 0111111
Q ss_pred hccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 512 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 512 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
............+..+.+++.+||+.+|++|||+.|+++.|+.
T Consensus 228 --------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 228 --------MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp --------TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred --------cCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111111223344678999999999999999999999999975
No 65
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3e-41 Score=343.77 Aligned_cols=261 Identities=28% Similarity=0.442 Sum_probs=202.3
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
...++|...+.||+|+||+||+|.+. ..+|+|.++... .....+.|.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 34578899999999999999999874 469999887533 2334578999999999999999999999875 4568899
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999999753 33489999999999999999999999 99999999999999999999999999998654
Q ss_pred cC-CcceeecccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 440 VR-KTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 440 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
.. .........||+.|+|||.+. +..++.++|||||||++|||+||+.||....... .....+. ....
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~~~---~~~~- 255 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVG---RGYA- 255 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHH---HTCC-
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHHHh---cCCC-
Confidence 32 222333457999999999986 6678999999999999999999999997433211 1111111 1100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.+.+ .......+..+.+++.+||+.+|++||++.||++.|+..
T Consensus 256 ----~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 256 ----SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp ----CCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred ----Ccch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 0110 011123346789999999999999999999999999874
No 66
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.2e-41 Score=355.31 Aligned_cols=267 Identities=16% Similarity=0.187 Sum_probs=203.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeCC------CcEEEEEEeccCCCCc----------hHHHHHHHHHHHHhccCCCcce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLAD------GTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLLR 345 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~ 345 (609)
..++|.+.+.||+|+||+||+|.+.+ ++.||||++....... ....+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999999864 4789999986432100 0112334555566778999999
Q ss_pred eeeEeeCC----CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe
Q 007286 346 LIGFCTTP----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL 421 (609)
Q Consensus 346 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 421 (609)
+++++... ...++||||+ +++|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998664 3479999999 99999999763 23489999999999999999999999 99999999999999
Q ss_pred C--CCCcEEEcccccceeeccCCcce------eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCc
Q 007286 422 D--EDFEAVVGDFGLAKLVDVRKTNV------TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSR 493 (609)
Q Consensus 422 ~--~~~~~kl~DfGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~ 493 (609)
+ .++.+||+|||+++.+....... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 88999999999998765332211 133459999999999999999999999999999999999999997422
Q ss_pred cccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 494 LEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.. ........ ......+..++++.+... ..+..+.+++..||+.+|++||++.+|++.|++.
T Consensus 266 ~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 266 KD----PKYVRDSK-IRYRENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp TC----HHHHHHHH-HHHHHCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cC----HHHHHHHH-HHhhhhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 21 11111111 111223334444433211 2235789999999999999999999999999874
No 67
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-41 Score=351.25 Aligned_cols=249 Identities=22% Similarity=0.259 Sum_probs=205.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|+..+.||+|+||+||+|+.. +|+.||||++++.. .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367889999999999999999975 68999999996421 233467789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999997633 388999999999999999999999 99999999999999999999999999998643
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. ........||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......... ..
T Consensus 157 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~---- 222 (337)
T 1o6l_A 157 SD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILME-EI---- 222 (337)
T ss_dssp CT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC----
T ss_pred cC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 22 22334567999999999999999999999999999999999999999643211 111111111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~ 558 (609)
.++...+..+.+++.+|++.||++|| ++.|+++
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11222346789999999999999999 8888875
No 68
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.5e-42 Score=341.17 Aligned_cols=256 Identities=26% Similarity=0.391 Sum_probs=210.9
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
..++|...+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 346788899999999999999999889999999997533 235789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|.+++.... ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 999999999997632 3478999999999999999999999 9999999999999999999999999999866432
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhcc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 520 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 520 (609)
.........+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~i~~~~~------ 223 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--------EVVEDISTGFR------ 223 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC------
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--------HHHHHHhcCCc------
Confidence 2222233457889999999998899999999999999999999 89998643211 11111111100
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 521 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 521 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...+...+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 224 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 224 ----LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011122346789999999999999999999999999874
No 69
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.1e-42 Score=349.62 Aligned_cols=270 Identities=26% Similarity=0.393 Sum_probs=217.3
Q ss_pred cCHHHHHHHhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCccee
Q 007286 274 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRL 346 (609)
Q Consensus 274 ~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l 346 (609)
+...+++...++|.+.+.||+|+||+||+|.+ .+++.||||+++........+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44566667788999999999999999999984 356899999997655545567899999999999 69999999
Q ss_pred eeEeeCCC-cceEEeecccCchhhhhhhhcCCC------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007286 347 IGFCTTPT-ERLLVYPFMQNLSVAYRLREIKPG------------EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRD 413 (609)
Q Consensus 347 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 413 (609)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987655 489999999999999999864331 22388999999999999999999999 999999
Q ss_pred CCCCcEEeCCCCcEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCC
Q 007286 414 VKAANVLLDEDFEAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDF 491 (609)
Q Consensus 414 lkp~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~ 491 (609)
|||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654332 22334567899999999999999999999999999999998 9999865
Q ss_pred CccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 492 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..... .. ......... .......+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 254 ~~~~~----~~---~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKIDE----EF---CRRLKEGTR----------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCCSH----HH---HHHHHHTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhH----HH---HHHhccCcc----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 43211 11 111111111 011122345789999999999999999999999999874
No 70
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.5e-42 Score=354.78 Aligned_cols=257 Identities=27% Similarity=0.401 Sum_probs=203.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCc----EEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++|...+.||+|+||+||+|.+. +++ +||+|.+...........+.+|+.++++++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888999999999999999974 344 388888865444444567889999999999999999999886 45688
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+|+||+++|+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999999753 23488889999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 438 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 438 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
....... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ... ........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~~~---~~~~~~~~ 236 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-----VPD---LLEKGERL 236 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-----HHH---HHHTTCBC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-----HHH---HHHcCCCC
Confidence 6543322 2344567889999999999999999999999999999999 999997543211 111 11111110
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
......+..+.+++.+||+.+|++||++.++++.|+...
T Consensus 237 ----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 237 ----------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111112346788999999999999999999999998753
No 71
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.7e-42 Score=366.95 Aligned_cols=264 Identities=19% Similarity=0.239 Sum_probs=211.6
Q ss_pred CHHHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEee
Q 007286 275 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 351 (609)
Q Consensus 275 ~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 351 (609)
.++++....++|+..++||+|+||+||+|++. +++.||||++.+.. .......+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34566677889999999999999999999986 47899999986421 1222345889999999999999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 431 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 431 (609)
+.+..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999763 23489999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeecccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007286 432 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 506 (609)
Q Consensus 432 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 506 (609)
||+++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||...... +..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--------~~~ 290 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------ETY 290 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHH
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--------HHH
Confidence 9999877655444445568999999999987 567899999999999999999999999753321 111
Q ss_pred HHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHH
Q 007286 507 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVR 558 (609)
Q Consensus 507 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~evl~ 558 (609)
........ ...-+ ......+..+.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~--~~~~p----~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKE--RFQFP----TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHH--HCCCC----SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred Hhhhhccc--cccCC----cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11111000 00000 011123467889999999998888 999999875
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.4e-41 Score=349.20 Aligned_cols=256 Identities=21% Similarity=0.293 Sum_probs=206.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccC----CCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF----ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.+.|.+.+.||+|+||+||+|... +|+.||||++... ......+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467899999999999999999975 6899999998531 12234678999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccc
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGL 434 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGl 434 (609)
+||||+++|+|.+.+.........+++..+..++.||+.||.|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988876544445589999999999999999999999 9999999999999987654 99999999
Q ss_pred ceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..........
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~- 248 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGK- 248 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTC-
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCC-
Confidence 987754322 23345799999999999999999999999999999999999999964311 1111111100
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. ..+... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YK--MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CC--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 000000 112367899999999999999999999985
No 73
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.8e-41 Score=354.57 Aligned_cols=254 Identities=22% Similarity=0.259 Sum_probs=200.3
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 357 (609)
..++|+..++||+|+||+||+|+.+ +++.||||++++.. .......+..|..++.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 4568999999999999999999976 57899999997532 223345678899999877 8999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 130 lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999997643 389999999999999999999999 999999999999999999999999999985
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
.... .......+||+.|+|||++.+..++.++|||||||++|||+||+.||..........................
T Consensus 203 ~~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-- 279 (396)
T 4dc2_A 203 GLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 279 (396)
T ss_dssp CCCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--
T ss_pred cccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--
Confidence 3222 2234456799999999999999999999999999999999999999974332211111111111111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
.++...+..+.+++.+||+.||++||++
T Consensus 280 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 280 --------RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred --------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1122334678999999999999999996
No 74
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.2e-41 Score=342.17 Aligned_cols=257 Identities=21% Similarity=0.359 Sum_probs=205.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeCC----CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
..++|...+.||+|+||+||+|.+.+ +..||||.+.........+.+.+|+.++++++||||+++++++.. +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45788899999999999999999642 346999999765455567889999999999999999999999865 4568
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 9999999999999997632 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
.............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ..... ......
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~-----~~~~~---~~~~~~- 233 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD-----VIGVL---EKGDRL- 233 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG-----HHHHH---HHTCCC-
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH-----HHHHH---hcCCCC-
Confidence 65443333344567889999999998899999999999999999999 999986433211 11111 111110
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
......+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 234 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 234 ---------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 11122346789999999999999999999999999874
No 75
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.5e-42 Score=351.57 Aligned_cols=267 Identities=24% Similarity=0.384 Sum_probs=216.0
Q ss_pred HHHHHHHhcCCCccCcccccCCceEEEEEeC------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeE
Q 007286 276 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGF 349 (609)
Q Consensus 276 ~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 349 (609)
.++++...++|...+.||+|+||.||+|.+. +++.||||.+...........+.+|+++++.++||||++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 3455667789999999999999999999864 3778999999765544556779999999999999999999999
Q ss_pred eeCCCcceEEeecccCchhhhhhhhcC------CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 007286 350 CTTPTERLLVYPFMQNLSVAYRLREIK------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE 423 (609)
Q Consensus 350 ~~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 423 (609)
+...+..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 999999999999999999999997532 1123478899999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccceeeccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchh
Q 007286 424 DFEAVVGDFGLAKLVDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVL 501 (609)
Q Consensus 424 ~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~ 501 (609)
++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------ 247 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------ 247 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------
Confidence 999999999999865433221 1223457889999999998999999999999999999999 88888643211
Q ss_pred HHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 502 LLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+......... . .......+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 248 --~~~~~~~~~~-~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 248 --QVLRFVMEGG-L---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp --HHHHHHHTTC-C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred --HHHHHHHcCC-c---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 1111111111 0 011223346789999999999999999999999999885
No 76
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.9e-42 Score=344.52 Aligned_cols=259 Identities=28% Similarity=0.418 Sum_probs=211.3
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
++...++|...+.||+|+||.||+|.+.++..||||.++... ...+.+.+|++++++++||||+++++++. .+..++
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI 84 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence 344567899999999999999999999888899999996432 34678999999999999999999999986 456899
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +|+||||||+||++++++.+||+|||+++..
T Consensus 85 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp EEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 999999999999997532 12488999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
............+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~~~~~~~~--- 228 (279)
T 1qpc_A 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQNLERGYR--- 228 (279)
T ss_dssp SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC---
T ss_pred cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHHHHhcccC---
Confidence 6543333344557889999999988889999999999999999999 89998643211 11111111110
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......+..+.+++.+|++.+|++|||+.++++.|++.
T Consensus 229 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 229 -------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999873
No 77
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=348.22 Aligned_cols=253 Identities=19% Similarity=0.243 Sum_probs=205.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-----chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|...+.||+|+||.||+|... +|+.||+|.+...... ...+.+.+|+.+++.++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456888999999999999999975 6899999998753321 2467899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 432 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 432 (609)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 9999999999999999753 3489999999999999999999999 999999999999999887 8999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .........
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHhc
Confidence 9998765332 233456999999999999899999999999999999999999999643211 111111110
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.. . ..... ....+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~--~-~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 NY--E-FEDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC--C-CCHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC--C-cCccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 0 00000 01123578899999999999999999999873
No 78
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.5e-42 Score=348.88 Aligned_cols=264 Identities=24% Similarity=0.360 Sum_probs=207.5
Q ss_pred hcCCCccCcccccCCceEEEEEe-----CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC--Cc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~ 355 (609)
.+.|+..+.||+|+||.||+|++ .+++.||||+++........+.+.+|+++++.++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35678889999999999999994 368999999998655555678899999999999999999999999876 56
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 789999999999999996532 3389999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc-------cccchhHHHHH
Q 007286 436 KLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE-------EEDDVLLLDHV 506 (609)
Q Consensus 436 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~-------~~~~~~~~~~~ 506 (609)
+........ ......||..|+|||.+.+..++.++||||||+++|||+||+.|+...... ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 887644322 233456888999999999999999999999999999999999986422100 00000011111
Q ss_pred HHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 507 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 507 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
... ............+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 254 ~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 254 NTL----------KEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHH----------HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHH----------hccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 111 1111112233445689999999999999999999999999976
No 79
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.6e-42 Score=363.25 Aligned_cols=261 Identities=20% Similarity=0.254 Sum_probs=209.8
Q ss_pred HHHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeC
Q 007286 276 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 352 (609)
Q Consensus 276 ~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 352 (609)
.+++....++|...+.||+|+||+||+|++. +++.||+|++++.. .......+.+|+.+++.++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455667789999999999999999999976 58899999986411 12223457899999999999999999999999
Q ss_pred CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007286 353 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 432 (609)
Q Consensus 353 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 432 (609)
....++||||+++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999999753 278889999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK----SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 508 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 508 (609)
|+++.............+||+.|+|||++.+.. ++.++|||||||++|||+||+.||...... .....
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~ 284 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSK 284 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHH
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hHHHH
Confidence 999877654443445678999999999997655 789999999999999999999999743321 11111
Q ss_pred HhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHH
Q 007286 509 LEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPED--RPAMSEVVRM 559 (609)
Q Consensus 509 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~--RPs~~evl~~ 559 (609)
...... . +.-......+..+.+++.+|++.+|++ ||++.||+++
T Consensus 285 i~~~~~--~-----~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 285 IMNHKN--S-----LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHTHHH--H-----CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHhccc--c-----ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111000 0 000001122367899999999999988 9999998863
No 80
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=7.9e-42 Score=349.99 Aligned_cols=267 Identities=25% Similarity=0.340 Sum_probs=208.7
Q ss_pred CCccCcccccCCceEEEEEeC-----CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC--CcceE
Q 007286 286 FSEKNVLGQGGFGKVYRGVLA-----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLL 358 (609)
Q Consensus 286 ~~~~~~LG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 358 (609)
|...+.||+|+||+||++.+. +|+.||||+++........+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999998753 68899999998655555567899999999999999999999999764 56789
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.+++... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999753 288999999999999999999999 9999999999999999999999999999987
Q ss_pred ccCCcc--eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 439 DVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 439 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
...... ......+|..|+|||.+.+..++.++||||||+++|||+||+.||......... ...+...........
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE---LIGIAQGQMTVLRLT 261 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH---HHCSCCHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh---hhcccccchhHHHHH
Confidence 543322 223456788999999999989999999999999999999999998642211000 000000000001111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..+............+..+.+++.+||+.||++|||+.|+++.|+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 12222222223334457899999999999999999999999999873
No 81
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.2e-41 Score=342.67 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=205.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|.+.+.||+|+||+||+|.+. +|+.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC--cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467889999999999999999975 6889999998632 3345678899999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--CCcEEEcccccceeec
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVD 439 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~ 439 (609)
|+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+++...
T Consensus 82 ~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999999653 23489999999999999999999999 9999999999999987 7899999999998775
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +........... .
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~---~ 222 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIENIMNAEYT---F 222 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCC---C
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHHHHHcCCCC---C
Confidence 432 234457899999999999888999999999999999999999999643221 111111111000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+... ....+.++.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 DEEA----FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHHH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Chhh----hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 0122467899999999999999999999987
No 82
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=343.17 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=195.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-------------------------chHHHHHHHHHHHH
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-------------------------GGDAAFQREVEMIS 336 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-------------------------~~~~~~~~E~~~l~ 336 (609)
.++|...+.||+|+||.||+|... +|+.||||++...... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467889999999999999999975 6899999998643211 12356889999999
Q ss_pred hccCCCcceeeeEeeC--CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 007286 337 VAVHRNLLRLIGFCTT--PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDV 414 (609)
Q Consensus 337 ~l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 414 (609)
+++||||+++++++.. ....++||||+++++|.+++.. ..+++..+..++.|+++||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999976 4578999999999999876532 3489999999999999999999999 9999999
Q ss_pred CCCcEEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCC
Q 007286 415 KAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDF 491 (609)
Q Consensus 415 kp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~elltg~~p~~~ 491 (609)
||+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||+||+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654322 234457999999999997765 47899999999999999999999964
Q ss_pred CccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 492 SRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.... ........ ... ........+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~--------~~~~~~~~-~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERIM--------CLHSKIKS-QAL--------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSHH--------HHHHHHHH-CCC--------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHH--------HHHHHHhc-ccC--------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 3211 11111111 110 00011123467899999999999999999999874
No 83
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-41 Score=340.62 Aligned_cols=256 Identities=25% Similarity=0.343 Sum_probs=208.1
Q ss_pred hcCCCccC-cccccCCceEEEEEeC---CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 283 TDNFSEKN-VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 283 ~~~~~~~~-~LG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
.++|.+.+ .||+|+||.||+|.+. ++..||||+++........+.+.+|++++++++||||+++++++. .+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEE
Confidence 34565665 8999999999999864 578899999986555556778999999999999999999999994 556899
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++++|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 99999999999999642 33489999999999999999999999 9999999999999999999999999999877
Q ss_pred ccCCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 439 DVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 439 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
....... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~i~~~~-- 230 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGK-- 230 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHHHHHTTC--
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHhcCC--
Confidence 5433222 223456889999999988889999999999999999999 99999643321 1111111111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 231 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 231 --------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp --------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1112233456889999999999999999999999999874
No 84
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=348.64 Aligned_cols=264 Identities=25% Similarity=0.365 Sum_probs=196.9
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeCC-C---cEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLAD-G---TKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 353 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 353 (609)
+....++|...+.||+|+||+||+|.+.. + ..||||+++... .....+.+.+|++++++++||||+++++++...
T Consensus 18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 33456789999999999999999999754 3 279999987532 344567899999999999999999999999877
Q ss_pred Ccc------eEEeecccCchhhhhhhhcCC--CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007286 354 TER------LLVYPFMQNLSVAYRLREIKP--GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 425 (609)
Q Consensus 354 ~~~------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 425 (609)
... ++|+||+++|+|.+++..... ....+++..++.++.|++.||.|||++ +|+||||||+||+++.++
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~ 174 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDM 174 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTS
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCC
Confidence 655 899999999999999975432 223589999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007286 426 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 426 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 503 (609)
.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... .
T Consensus 175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~- 248 (323)
T 3qup_A 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-----I- 248 (323)
T ss_dssp CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----H-
T ss_pred CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-----H-
Confidence 999999999987643322 12233457889999999999999999999999999999999 899987533211 1
Q ss_pred HHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 504 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 504 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
......... .......+..+.+++.+||+.||++|||+.++++.|++.
T Consensus 249 --~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 249 --YNYLIGGNR----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp --HHHHHTTCC----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHhcCCC----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111111110 111223346789999999999999999999999999874
No 85
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=347.89 Aligned_cols=256 Identities=25% Similarity=0.394 Sum_probs=202.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCc----EEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGT----KVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++|...+.||+|+||+||+|.+. +++ +||+|.+.........+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467889999999999999999964 344 468888876556667889999999999999999999999998754 78
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+|++|+++|+|.+++.... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 8999999999999998643 3488999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc-eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 438 VDVRKTN-VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 438 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
....... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....... .... ....
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----~~~~---~~~~--- 235 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----ISSI---LEKG--- 235 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----HHHH---HHTT---
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----HHHH---HHcC---
Confidence 6533222 2233457889999999999999999999999999999999 999997543221 1111 1111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.........+..+.+++.+||+.||++||++.|+++.|+..
T Consensus 236 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 236 -------ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp -------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111223346789999999999999999999999999875
No 86
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=6.9e-41 Score=342.80 Aligned_cols=266 Identities=23% Similarity=0.328 Sum_probs=192.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||+||+|... +|+.||||+++..........+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467888999999999999999975 6899999999755444556788999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcC--CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 362 FMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|++ |+|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 58988886532 2223488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc---cc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK---RL 515 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 515 (609)
.... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+....... ..
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-----QLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCSCCTTTC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHhCCCChhHh
Confidence 3222 2334568999999999976 468999999999999999999999997543211 111111110000 00
Q ss_pred hhh-----ccccc------------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAI-----VDRNL------------NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~-----~d~~l------------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..+ ..+.. ........+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 00000 00001123357899999999999999999999885
No 87
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.8e-41 Score=339.09 Aligned_cols=263 Identities=22% Similarity=0.333 Sum_probs=199.8
Q ss_pred cCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeec
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
++|...+.||+|+||+||+|...+|+.||||++.... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4788899999999999999999889999999986432 223347788999999999999999999999999999999999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 442 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 442 (609)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 8888887532 3488899999999999999999999 99999999999999999999999999998664322
Q ss_pred cceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc--cchh--
Q 007286 443 TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK--RLDA-- 517 (609)
Q Consensus 443 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 517 (609)
.......||+.|+|||.+.+. .++.++|||||||++|||+||+.||....... .+........... ....
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T 1ob3_A 155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD----QLMRIFRILGTPNSKNWPNVT 229 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCCTTTSTTGG
T ss_pred -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHHCCCChhhchhhh
Confidence 122344689999999999764 58999999999999999999999997533211 1111111110000 0000
Q ss_pred ---hcccccc-------CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 ---IVDRNLN-------KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ---~~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..++... .......+..+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0011223467889999999999999999999985
No 88
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6e-41 Score=346.93 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=200.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 358 (609)
.++|...+.||+|+||.||+|++. +|+.||||+++... .....+.+.+|..++.++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357888999999999999999976 58899999997533 223346688999999887 89999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|..++.... .+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999999864
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
... ........||+.|+|||.+.+..++.++|||||||++|||+||+.||..........................
T Consensus 161 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--- 236 (345)
T 3a8x_A 161 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--- 236 (345)
T ss_dssp CCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---
T ss_pred cCC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---
Confidence 322 2233456799999999999999999999999999999999999999964322111100000111111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
.++...+..+.+++.+||+.||++||++
T Consensus 237 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 -------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1122334678999999999999999996
No 89
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-41 Score=346.65 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=202.7
Q ss_pred hcCCCccCcccccCCceEEEEEeCC-----CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLAD-----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++|...+.||+|+||+||+|.+.. +..||||+++..........+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999999652 24699999976554555678999999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|.+++... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999999763 23489999999999999999999999 999999999999999999999999999987
Q ss_pred eccCCcc--eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 438 VDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 438 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
....... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +..........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHHHHHHCCCc
Confidence 6543221 1223346789999999999999999999999999999999 99998643211 11111111111
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 269 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 269 ----------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp ----------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ----------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999874
No 90
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.7e-41 Score=339.24 Aligned_cols=263 Identities=20% Similarity=0.246 Sum_probs=200.8
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
++|+..+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57888999999999999999975 68999999997543 33345788999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|++++.+ ..+... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~l~-~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQDLK-KYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSEEHH-HHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCCCHH-HHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9987544 444332 23489999999999999999999999 9999999999999999999999999999876533
Q ss_pred CcceeecccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc-----
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL----- 515 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 515 (609)
. .......||+.|+|||.+.+.. ++.++|||||||++|||+||+.|+...... ......+.........
T Consensus 155 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~----~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV----DDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH----HHHHHHHHHHHCCCCTTTCTT
T ss_pred c-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH----HHHHHHHHHHhCCCChhhhhh
Confidence 2 2234456899999999997765 799999999999999999998886432211 1111111111100000
Q ss_pred -hhhcc---------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 -DAIVD---------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 -~~~~d---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
....+ ...........+..+.+++.+|++.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000 00000112234567889999999999999999999985
No 91
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.4e-42 Score=373.58 Aligned_cols=261 Identities=26% Similarity=0.380 Sum_probs=212.8
Q ss_pred HHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 278 ELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 278 el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.++...++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|++++++++||||+++++++.. +..+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 3445667888899999999999999999888899999997533 345789999999999999999999999876 6789
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|.++++... ...+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 338 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred EeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 9999999999999997532 13378999999999999999999999 999999999999999999999999999986
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
.............++..|+|||.+.+..++.++|||||||++|||+| |+.||...... +.........+
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~~i~~~~~-- 482 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERGYR-- 482 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHHHHHTTCC--
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC--
Confidence 64322222233457789999999999999999999999999999999 89998643211 11122211111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
.......+..+.+++.+||+.+|++|||+.+|++.|+...
T Consensus 483 --------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 483 --------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1112234467899999999999999999999999998853
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.7e-41 Score=358.00 Aligned_cols=255 Identities=18% Similarity=0.228 Sum_probs=205.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|...+.||+|+||+||+|... +|+.||+|++..... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567999999999999999999974 789999999875332 23456789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEcccccce
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAK 436 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~ 436 (609)
|||+++|+|.+.+... ..+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999763 2389999999999999999999999 999999999999998 56789999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ......... ...
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~~-~~~ 231 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--------RLYQQIKAG-AYD 231 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHT-CCC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhC-CCC
Confidence 7654322 233467999999999999999999999999999999999999999643211 111111111 000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.........+..+.+++.+|++.||++|||+.|+++.
T Consensus 232 ------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 ------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0011112234678999999999999999999999863
No 93
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.1e-40 Score=335.29 Aligned_cols=261 Identities=18% Similarity=0.241 Sum_probs=202.6
Q ss_pred HhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEe-eCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC-TTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv 359 (609)
..++|...+.||+|+||+||+|.+ .+++.||||++..... ...+.+|+++++.++|++++..++++ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999996 5789999998754322 24578899999999998888777666 556678999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccce
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAK 436 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~ 436 (609)
|||+ +++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 999999997532 3489999999999999999999999 99999999999999 788999999999998
Q ss_pred eeccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007286 437 LVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 510 (609)
Q Consensus 437 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 510 (609)
........ ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~ 234 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK--YERISEKK 234 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH--HHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh--hhhhhccc
Confidence 77543321 22345789999999999999999999999999999999999999975433222111 11111111
Q ss_pred hhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 511 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 511 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........ ....+..+.+++.+||+.+|++|||+.+|++.|++.
T Consensus 235 ~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 235 MSTPIEVL---------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHSCHHHH---------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred ccchhhhh---------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 11111000 011235789999999999999999999999999874
No 94
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=344.26 Aligned_cols=246 Identities=22% Similarity=0.231 Sum_probs=193.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-CchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|+..+.||+|+||+||+|.+. +|+.||||++..... ......+..|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 467999999999999999999986 799999999864322 23334556666666555 899999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 668888887643 3489999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ........ ..
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~~~~~~~-~~---- 269 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GWQQLRQG-YL---- 269 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HHHHHTTT-CC----
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHhcc-CC----
Confidence 332 2334569999999999875 79999999999999999999977654211 01111110 00
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.+.+ ....+..+.+++.+|++.||++|||+.|+++
T Consensus 270 ~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 PPEF----TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cccc----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0001 1122467899999999999999999999986
No 95
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-41 Score=339.00 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=204.5
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC--CcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP--TERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 359 (609)
.++|...+.||+|+||+||+|++. |+.||||+++... .....+.|.+|+.++++++||||+++++++... ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999985 8999999997543 334456799999999999999999999999877 678999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
|||+++|+|.+++.... ...+++..++.++.|++.||.|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 99999999999998632 23589999999999999999999998 7 99999999999999999999999988754
Q ss_pred eccCCcceeecccccccccCcccccCCCCCc---chhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSE---RTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
... ....||+.|+|||.+.+..++. ++||||||+++|||+||+.||...... .........
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~-- 226 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--------EIGMKVALE-- 226 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--------HHHHHHHHS--
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--------HHHHHHHhc--
Confidence 321 2345899999999998765544 899999999999999999999643221 111111111
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
......+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 227 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 227 -------GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp -------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 111112223446789999999999999999999999999874
No 96
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.7e-41 Score=336.37 Aligned_cols=254 Identities=21% Similarity=0.282 Sum_probs=201.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||+||++... +|..||+|++.........+.+.+|++++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 367888999999999999999975 6899999999765555567889999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccceee
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~ 438 (609)
|+++|+|.+.+.........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999876433345589999999999999999999999 99999999999999 45678999999999866
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.... ......||+.|+|||.+. ..++.++||||||+++|||+||+.||...... ...........
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~---- 242 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--------EVQQKATYKEP---- 242 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCC----
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--------HHHhhhccCCc----
Confidence 4322 233456899999999985 57899999999999999999999999743321 11111111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 243 ---~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 243 ---NYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00012357889999999999999999999985
No 97
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-41 Score=354.20 Aligned_cols=255 Identities=29% Similarity=0.428 Sum_probs=195.2
Q ss_pred CCCccCcccccCCceEEEEEeC--CC--cEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeC-CCcceEE
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLA--DG--TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-PTERLLV 359 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~--~g--~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv 359 (609)
.|...+.||+|+||+||+|.+. ++ ..||||.++........+.|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999964 22 36899998765556667889999999999999999999998754 4578999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.++++.. ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999753 23478899999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcc---eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 440 VRKTN---VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 440 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
..... ......+|+.|+|||.+.+..++.++|||||||++|||+| |.+||....... .... .......
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-----~~~~---~~~~~~~ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----ITVY---LLQGRRL 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-----HHHH---HHTTCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-----HHHH---HHcCCCC
Confidence 32211 2233457889999999999999999999999999999999 677775432211 1111 1111110
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
..+...+..+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 316 ----------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 316 ----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01122346789999999999999999999999999874
No 98
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-41 Score=374.59 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=202.9
Q ss_pred CCCccC-cccccCCceEEEEEeC---CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 285 NFSEKN-VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 285 ~~~~~~-~LG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
++...+ .||+|+||.||+|.+. ++..||||+++........+.|.+|++++++++|||||++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333344 7999999999999874 4668999999865555667899999999999999999999999976 5689999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 415 E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp ECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999999753 34489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 441 RKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 441 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
..... .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... +.........+
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~--- 557 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMAFIEQGKR--- 557 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HHHHHHHTTCC---
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HHHHHHHcCCC---
Confidence 32221 222345789999999999999999999999999999998 99999753321 11111211111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...+...+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus 558 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 558 -------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp -------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred -------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 112233456899999999999999999999999999873
No 99
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-41 Score=347.51 Aligned_cols=246 Identities=23% Similarity=0.317 Sum_probs=201.7
Q ss_pred cCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
++|.+.+.||+|+||+||+|.+ .+|+.||||++.... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999997 478999999986321 1223467899999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+ +|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 678888886633 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. ......||+.|+|||.+.+..+ +.++|||||||++|||+||+.||+........ ..+.
T Consensus 161 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------~~i~ 221 (336)
T 3h4j_B 161 GN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------KKVN 221 (336)
T ss_dssp SB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------CCCC
T ss_pred Cc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------HHHH
Confidence 22 2334579999999999988776 78999999999999999999999754322110 0011
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
... ...+...+..+.+++.+|++.||++|||+.|+++
T Consensus 222 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000 0112223467889999999999999999999985
No 100
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=349.81 Aligned_cols=253 Identities=22% Similarity=0.315 Sum_probs=198.1
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccC--CCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVH--RNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~l 358 (609)
..++|++.+.||+|+||.||++...+++.||||++.... .....+.+.+|+.++.+++| |||+++++++......++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 356788999999999999999999889999999986433 23345778999999999986 999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||| +.+|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++ ++.+||+|||+++..
T Consensus 87 v~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEC-CCSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEe-CCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 999 5688999999863 2488999999999999999999999 999999999999997 578999999999876
Q ss_pred ccCCcc-eeecccccccccCcccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007286 439 DVRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 506 (609)
Q Consensus 439 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 506 (609)
...... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... . ..
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~-~~- 229 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------I-SK- 229 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------H-HH-
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH------H-HH-
Confidence 543322 2334579999999999864 67899999999999999999999999632210 0 11
Q ss_pred HHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 507 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 507 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
+..++++.....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 230 --------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp --------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111122221122222223578899999999999999999999864
No 101
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=342.78 Aligned_cols=254 Identities=26% Similarity=0.400 Sum_probs=197.6
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeec
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
.++|++.+.||+|+||+||+|.+. ++.||||++.. ....+.|.+|++++++++||||+++++++. +..++||||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 357888899999999999999985 78999999853 345678999999999999999999999886 458999999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc-EEEcccccceeeccC
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-AVVGDFGLAKLVDVR 441 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DfGla~~~~~~ 441 (609)
+++|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999976332 234788899999999999999999932228999999999999988876 799999999765432
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 521 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (609)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||+...... ............
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~------- 222 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA------FRIMWAVHNGTR------- 222 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH------HHHHHHHHTTCC-------
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH------HHHHHHHhcCCC-------
Confidence 223458999999999999999999999999999999999999997432211 011111111110
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 522 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 522 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 223 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 223 ---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp ---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 111122345788999999999999999999999999875
No 102
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.4e-40 Score=346.70 Aligned_cols=254 Identities=20% Similarity=0.260 Sum_probs=205.5
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|.+.+.||+|+||.||+|.+. +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999975 68999999997533 233456788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccce
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAK 436 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 436 (609)
|||+++|+|.+.+... ..+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 9999999999988753 3488999999999999999999999 99999999999999865 459999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... . ......... ...
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~---~~~~~i~~~-~~~ 248 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----H---RLYAQIKAG-AYD 248 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----H---HHHHHHHHT-CCC
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----H---HHHHHHHhC-CCC
Confidence 765322 23345799999999999998999999999999999999999999864321 1 111111111 000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.........+..+.+++.+||+.||++|||+.++++.
T Consensus 249 ------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 ------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000011234678999999999999999999999864
No 103
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=353.70 Aligned_cols=274 Identities=18% Similarity=0.213 Sum_probs=214.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC--cceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT--ERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv 359 (609)
.++|.+.+.||+|+||+||+|++. +|+.||||++.........+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467889999999999999999976 589999999976544455678899999999999999999999997665 67999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEEEcccccc
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAVVGDFGLA 435 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DfGla 435 (609)
|||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999976432 22389999999999999999999999 99999999999999 78888999999999
Q ss_pred eeeccCCcceeecccccccccCcccccC--------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLST--------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
+...... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||............+.....
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 8765432 2234569999999999865 56788999999999999999999999643332222111111111
Q ss_pred HHhhhccchhh---c------ccc--ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 508 KLEREKRLDAI---V------DRN--LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 508 ~~~~~~~~~~~---~------d~~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
. ........+ . ... ............+.+++.+||+.||++||++.++++.++++
T Consensus 242 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 242 G-KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp S-CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred C-CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 1 100000000 0 001 11233577888999999999999999999999999998875
No 104
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=358.70 Aligned_cols=263 Identities=19% Similarity=0.228 Sum_probs=208.9
Q ss_pred CHHHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEee
Q 007286 275 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 351 (609)
Q Consensus 275 ~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 351 (609)
.+++.....++|+..+.||+|+||+||+++.+ +|+.||||++++.. .......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34566667889999999999999999999985 69999999996421 1122345789999999999999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 431 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 431 (609)
+.+..++||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 9999999999999999999997642 2488999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeecccccccccCccccc-------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007286 432 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 504 (609)
Q Consensus 432 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 504 (609)
||+++.............+||+.|+|||++. ...++.++|||||||++|||+||+.||...... +
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~ 277 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--------E 277 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------H
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--------H
Confidence 9999887654443344567999999999987 356899999999999999999999999753321 1
Q ss_pred HHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCC---CCHHHHHH
Q 007286 505 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR---PAMSEVVR 558 (609)
Q Consensus 505 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R---Ps~~evl~ 558 (609)
.......... ...- +......+.++.+++.+|+. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~--~~~~----p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKE--HLSL----PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHH--HCCC----C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhccc--CcCC----CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 1111111000 0000 00112234678999999999 99998 58888864
No 105
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=344.19 Aligned_cols=264 Identities=25% Similarity=0.340 Sum_probs=207.3
Q ss_pred HhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee----CCCcc
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT----TPTER 356 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----~~~~~ 356 (609)
..++|...+.||+|+||.||++.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++. .....
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 456899999999999999999997 57999999998642 3345678899999999999999999999986 34467
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++|+||+++|+|.+++.........+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 899999999999999987555556689999999999999999999999 99999999999999999999999999987
Q ss_pred eeccCCcc--------eeecccccccccCcccccCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 437 LVDVRKTN--------VTTQVRGTMGHIAPEYLSTGK---SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 437 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
........ ......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||+....... .....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~ 259 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---SVALA 259 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS---CHHHH
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc---hhhHH
Confidence 65321111 012345799999999987554 68999999999999999999999853111100 00000
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGL 565 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~~ 565 (609)
. . ...........+..+.+++.+||+.||++|||+.++++.|+....
T Consensus 260 ~---~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 260 V---Q----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp H---H----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred h---h----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 0 001111122334678999999999999999999999999998653
No 106
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=349.80 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=204.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||++... +|+.||+|++.... .......+.+|+.+++.++|||||++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467889999999999999999975 58899999986421 233457889999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|..++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999999753 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
.. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...........
T Consensus 167 ~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-----~~~~~~~~~~~--- 236 (384)
T 4fr4_A 167 RE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-----KEIVHTFETTV--- 236 (384)
T ss_dssp TT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-----HHHHHHHHHCC---
T ss_pred CC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-----HHHHHHHhhcc---
Confidence 33 23345679999999999964 4589999999999999999999999974332111 11111111100
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVVR 558 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~evl~ 558 (609)
..++...+..+.+++.+||+.+|++||+ +.+|.+
T Consensus 237 --------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 --------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1112233467899999999999999998 666653
No 107
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.1e-41 Score=348.40 Aligned_cols=254 Identities=21% Similarity=0.243 Sum_probs=195.3
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|...+.||+|+||+||+++.. +|+.||||++.... ...+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 3467999999999999999999976 78999999997533 23467889999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEcccccceee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--AVVGDFGLAKLV 438 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~ 438 (609)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 96 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 96 EYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999999997643 389999999999999999999999 9999999999999987765 999999999754
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSER-TDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
... .......||+.|+|||++.+..++.+ +|||||||++|||+||+.||........ ...........
T Consensus 169 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~~~~~~~~~----- 237 (361)
T 3uc3_A 169 VLH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD----YRKTIQRILSV----- 237 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC----HHHHHHHHHTT-----
T ss_pred ccc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH----HHHHHHHHhcC-----
Confidence 322 22234569999999999988887665 8999999999999999999975432211 11111111111
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
..........+..+.+++.+||+.+|++|||+.|+++.
T Consensus 238 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 238 ----KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00000111223678899999999999999999999863
No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.6e-40 Score=344.07 Aligned_cols=262 Identities=20% Similarity=0.208 Sum_probs=203.4
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccC----CCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF----ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 353 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~----~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 353 (609)
+....++|...+.||+|+||.||+|... +++.||+|++... ......+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456778999999999999999999974 6889999998642 2345567899999999999999999999999999
Q ss_pred CcceEEeecccCchhhhhhhhcCCC------------------------------------CCCccHHHHHHHHHHHHHH
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPG------------------------------------EPVLDWVTRKRVALGAARG 397 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~ 397 (609)
+..++||||+++|+|.+++...... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999998632111 2234677788999999999
Q ss_pred HHHHHhcCCCCeEecCCCCCcEEeCCCC--cEEEcccccceeeccCCcc---eeecccccccccCcccccC--CCCCcch
Q 007286 398 LEYLHEHCNPKIIHRDVKAANVLLDEDF--EAVVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLST--GKSSERT 470 (609)
Q Consensus 398 L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~ 470 (609)
|+|||++ +|+||||||+||+++.++ .+||+|||+++.+...... ......||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 8999999999876432221 2345579999999999865 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCC
Q 007286 471 DVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR 550 (609)
Q Consensus 471 Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R 550 (609)
|||||||++|||+||+.||...... +........... ...+ .....+..+.+++.+|++.+|++|
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~li~~~l~~~p~~R 322 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLC--FENP-----NYNVLSPLARDLLSNLLNRNVDER 322 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC--TTSG-----GGGGSCHHHHHHHHHHSCSCTTTS
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccc--cCCc-----ccccCCHHHHHHHHHHcCCChhHC
Confidence 9999999999999999999643321 111111111100 0000 011234678999999999999999
Q ss_pred CCHHHHHH
Q 007286 551 PAMSEVVR 558 (609)
Q Consensus 551 Ps~~evl~ 558 (609)
|++.++++
T Consensus 323 ps~~~~l~ 330 (345)
T 3hko_A 323 FDAMRALQ 330 (345)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhc
Confidence 99999986
No 109
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7e-41 Score=338.07 Aligned_cols=261 Identities=28% Similarity=0.454 Sum_probs=197.0
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
+..++|.+.+.||+|+||+||+|++. ..||||+++... .....+.|.+|++++++++||||+++++++ .....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 34678999999999999999999874 369999997433 334457899999999999999999999965 45568999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++... ...+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 9999999999999653 24489999999999999999999999 99999999999999999999999999998654
Q ss_pred cCC-cceeecccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 440 VRK-TNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 440 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
... ........||+.|+|||.+. +..++.++||||||+++|||+||+.||...... ......+. ....
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~----~~~~ 243 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVG----RGSL 243 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH----HHHHHHHH----HTSC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH----HHHHHHhc----cccc
Confidence 322 22233456899999999986 567899999999999999999999999643221 11111111 1111
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.. .+ .......+..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 244 ~~----~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l 286 (289)
T 3og7_A 244 SP----DL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286 (289)
T ss_dssp CC----CT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred Cc----ch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 10 00 111223446899999999999999999999999999875
No 110
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.4e-41 Score=342.38 Aligned_cols=262 Identities=22% Similarity=0.362 Sum_probs=200.9
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++... .......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788999999999999999997 479999999997432 233457789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++.........++...++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976544455689999999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.... ......|++.|+|||.+.+..++.++||||||+++|||+||+.||...... ............ .
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~-~---- 255 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCD-Y---- 255 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC------HHHHHHHHHTTC-S----
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh------HHHHHHHhhccc-C----
Confidence 3222 223446899999999999999999999999999999999999998643211 111111111111 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........+..+.+++.+||+.||++|||+.+|++.|+.+
T Consensus 256 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 256 ----PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp ----CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 0001122346789999999999999999999999999875
No 111
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.1e-40 Score=333.30 Aligned_cols=260 Identities=19% Similarity=0.242 Sum_probs=205.3
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEe-eCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFC-TTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 360 (609)
.++|...+.||+|+||.||+|++ .+|+.||||++.... ..+.+.+|+.+++.++|++++..+.++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46899999999999999999997 579999999986432 234688999999999998877777666 5566779999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 437 (609)
||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 899999997532 3489999999999999999999999 99999999999999 4888999999999987
Q ss_pred eccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007286 438 VDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 511 (609)
Q Consensus 438 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (609)
....... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........... . ..+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~-~~~~~~~~ 235 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-Y-ERISEKKM 235 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH-H-HHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh-h-hhhccccc
Confidence 7543321 12345799999999999999999999999999999999999999975433222111 1 11111111
Q ss_pred hccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 512 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 512 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...... + ....+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus 236 ~~~~~~-----~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 236 STPIEV-----L----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HSCHHH-----H----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred CCchHH-----H----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 111000 0 011235789999999999999999999999999873
No 112
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.1e-41 Score=341.04 Aligned_cols=260 Identities=24% Similarity=0.344 Sum_probs=206.0
Q ss_pred HHHHHhcCCCccC-cccccCCceEEEEEeC---CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeC
Q 007286 278 ELQLATDNFSEKN-VLGQGGFGKVYRGVLA---DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 352 (609)
Q Consensus 278 el~~~~~~~~~~~-~LG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 352 (609)
++....++|.+.+ .||+|+||+||+|.+. +++.||||+++... .....+.+.+|+++++.++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 3344556788777 9999999999999652 47889999997543 233467899999999999999999999999 5
Q ss_pred CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007286 353 PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 432 (609)
Q Consensus 353 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 432 (609)
.+..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df 161 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF 161 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccC
Confidence 56788999999999999999863 2388999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHH
Q 007286 433 GLAKLVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKL 509 (609)
Q Consensus 433 Gla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 509 (609)
|+++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~ 233 (291)
T 1xbb_A 162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAML 233 (291)
T ss_dssp TTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHH
T ss_pred CcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHH
Confidence 9998775443322 222346789999999988889999999999999999999 99998643221 111111
Q ss_pred hhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 510 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 510 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.... ........+..+.+++.+||+.||++||++.++++.|+..
T Consensus 234 ~~~~----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 234 EKGE----------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HTTC----------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HcCC----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111 1112223446789999999999999999999999999873
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-41 Score=338.36 Aligned_cols=256 Identities=29% Similarity=0.374 Sum_probs=203.4
Q ss_pred CCCccCcccccCCceEEEEEeCC----CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc-eEE
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER-LLV 359 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv 359 (609)
.|...+.||+|+||+||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45566899999999999999632 2379999997655555667899999999999999999999999776655 899
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
+||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999762 23478999999999999999999999 99999999999999999999999999998654
Q ss_pred cCC---cceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 440 VRK---TNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 440 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
... ........+|+.|+|||.+.+..++.++||||||+++|||+||+.|+...... ....... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~----~~~~~~~---~~~~--- 245 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP----FDLTHFL---AQGR--- 245 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG----GGHHHHH---HTTC---
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH----HHHHHHh---hcCC---
Confidence 321 12223456789999999999999999999999999999999966654322111 1111111 1111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
........+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 246 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 246 -------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0111222346789999999999999999999999999874
No 114
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=351.83 Aligned_cols=246 Identities=26% Similarity=0.333 Sum_probs=196.9
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcc
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 356 (609)
...++|+..+.||+|+||+||+|++. +|+.||||+++... .......+..|..++..+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999996421 223456788999999988 699999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||+++|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999997643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
..... .......+||+.|+|||++.+..++.++|||||||++|||+||+.||...... +........
T Consensus 173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~---- 239 (353)
T 3txo_A 173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILND---- 239 (353)
T ss_dssp CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC----
T ss_pred ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--------HHHHHHHcC----
Confidence 54322 22334567999999999999888999999999999999999999999753321 111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
.. .++...+..+.+++.+|++.+|++||++
T Consensus 240 -----~~--~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 240 -----EV--VYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp -----CC--CCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred -----CC--CCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 00 1122234678899999999999999998
No 115
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-40 Score=346.82 Aligned_cols=253 Identities=19% Similarity=0.257 Sum_probs=205.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|.+.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+++++.++||||+++++++.+....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 467999999999999999999975 68999999986432 3345678999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC--CCcEEEcccccceeec
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVD 439 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~ 439 (609)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999988752 23489999999999999999999999 9999999999999974 5779999999998775
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ...........
T Consensus 203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~i~~~~~----- 267 (387)
T 1kob_A 203 PDE--IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKRCDW----- 267 (387)
T ss_dssp TTS--CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHCCC-----
T ss_pred CCc--ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCC-----
Confidence 432 233446999999999999999999999999999999999999999743211 11111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
..........+..+.+++.+||+.||++|||+.|+++.
T Consensus 268 --~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 268 --EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 00111112334678999999999999999999999864
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.9e-41 Score=340.62 Aligned_cols=257 Identities=28% Similarity=0.398 Sum_probs=202.4
Q ss_pred hcCCCccCcccccCCceEEEEEeCC----CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee-CCCcce
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLAD----GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT-TPTERL 357 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~ 357 (609)
..+|...+.||+|+||+||+|.+.+ +..||+|.+.........+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467888999999999999999643 23689999976555556678999999999999999999999864 456789
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999999752 23478899999999999999999999 999999999999999999999999999987
Q ss_pred eccCCc---ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 438 VDVRKT---NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTG-QRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 438 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
...... .......+|+.|+|||.+.+..++.++||||||+++|||+|| .+||....... ... ......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-----~~~---~~~~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-----ITV---YLLQGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-----HHH---HHHTTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-----HHH---HHhcCC
Confidence 643221 122345678899999999999999999999999999999995 55554322111 111 111110
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
. .......+..+.+++.+||+.+|++|||+.|+++.|++.
T Consensus 250 ~----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 289 (298)
T 3f66_A 250 R----------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289 (298)
T ss_dssp C----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 001112235789999999999999999999999999874
No 117
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=346.60 Aligned_cols=269 Identities=17% Similarity=0.195 Sum_probs=201.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCCCCc----------hHHHHHHHHHHHHhccCCCcceeee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLLRLIG 348 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l~~ 348 (609)
.++|...+.||+|+||+||+|.+. ++..||||+........ ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467889999999999999999985 57889999987532211 1234667888899999999999999
Q ss_pred EeeC----CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007286 349 FCTT----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 424 (609)
Q Consensus 349 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 424 (609)
++.. ....++||||+ +++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9877 67789999999 999999997643 589999999999999999999999 99999999999999988
Q ss_pred C--cEEEcccccceeeccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc
Q 007286 425 F--EAVVGDFGLAKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE 496 (609)
Q Consensus 425 ~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~ 496 (609)
+ .+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876432211 1134579999999999999999999999999999999999999995321111
Q ss_pred ccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007286 497 EDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 567 (609)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~~~~ 567 (609)
... ......... .....+..... ....+..+.+++.+||+.+|++||++.+|++.|+...+..
T Consensus 268 ---~~~-~~~~~~~~~-~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 268 ---VAV-QTAKTNLLD-ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp ---HHH-HHHHHHHHH-TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred ---HHH-HHHHHhhcc-cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 111 111111111 11111110000 0123357899999999999999999999999999865543
No 118
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-40 Score=350.67 Aligned_cols=273 Identities=18% Similarity=0.198 Sum_probs=204.8
Q ss_pred HhcCCCccCccccc--CCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 282 ATDNFSEKNVLGQG--GFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 282 ~~~~~~~~~~LG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
..++|++.+.||+| +||+||+|++. +|+.||||++.... .....+.+.+|+.+++.++|||||++++++...+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35678999999999 99999999986 69999999997533 2334567888999999999999999999999999999
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999976422 3389999999999999999999999 999999999999999999999999999875
Q ss_pred eccCCc------ceeecccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007286 438 VDVRKT------NVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 509 (609)
Q Consensus 438 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 509 (609)
...... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 532211 11223468999999999987 5799999999999999999999999975332211000000000000
Q ss_pred hhh-----c-------------cchhhcc---------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 510 ERE-----K-------------RLDAIVD---------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 510 ~~~-----~-------------~~~~~~d---------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
... . ....... ...........+..+.+++.+||+.||++|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 0 0000000 000001123345678999999999999999999999853
No 119
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=337.64 Aligned_cols=246 Identities=25% Similarity=0.294 Sum_probs=204.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||+||+++.. +|+.||+|+++... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367889999999999999999975 69999999986421 123456788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999999863 2388999999999999999999999 99999999999999999999999999998754
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. .....||+.|+|||.+.+..++.++|||||||++|||+||+.||...... .........
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~------- 218 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNA------- 218 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHC-------
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-------
Confidence 32 23457999999999999999999999999999999999999999643211 111111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~ 558 (609)
.+ .++...+.++.+++.+|++.||++|| +++++++
T Consensus 219 --~~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 219 --EL--RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CC--CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CC--CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 00 11222346789999999999999999 7888774
No 120
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=347.11 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=190.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|.+.+.||+|+||+||+|++. +++.||||+++... ..+.+.+|++++++++||||+++++++......++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 4567899999999999999999986 58899999997532 3467889999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 437 (609)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 999999999998753 3488999999999999999999999 9999999999999975 88999999999986
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
.... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ... .........
T Consensus 201 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~---~~~i~~~~~--- 268 (349)
T 2w4o_A 201 VEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----QFM---FRRILNCEY--- 268 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----HHH---HHHHHTTCC---
T ss_pred cCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----HHH---HHHHHhCCC---
Confidence 6432 2233456899999999999999999999999999999999999998643221 001 111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
..........+..+.+++.+|++.||++|||+.|+++.
T Consensus 269 ----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 269 ----YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111122334678999999999999999999999873
No 121
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-40 Score=333.17 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=206.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|+..+.||+|+||.||+|... +|+.||||++.........+.+.+|+.+++.++||||+++++++...+..++|+|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999975 6899999999755445566889999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 99999999988642 3488999999999999999999999 9999999999999999999999999999876432
Q ss_pred Cc-ceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 442 KT-NVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 442 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. .......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||........ ....+ ...... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~----~~~~~~---~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ---EYSDW----KEKKTY---L 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH---HHHHH----HTTCTT---S
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH---HHHHh----hhcccc---c
Confidence 21 22334568999999999987765 7899999999999999999999975432111 11111 110000 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
......+..+.+++.+|++.||++|||+.|+++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001123457889999999999999999999875
No 122
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-40 Score=340.82 Aligned_cols=272 Identities=23% Similarity=0.327 Sum_probs=205.1
Q ss_pred cCHHHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc--cCCCcceeeeEee
Q 007286 274 YSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA--VHRNLLRLIGFCT 351 (609)
Q Consensus 274 ~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~ 351 (609)
.+........++|.+.+.||+|+||.||+|++. |+.||||++.. .....+..|.+++... +||||+++++++.
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~ 101 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT----TEEASWFRETEIYQTVLMRHENILGFIAADI 101 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec----cccchhhhHHHHHHHHhhcCCCeeeEEEEEc
Confidence 344444556788999999999999999999985 89999999853 2345566666666554 8999999999987
Q ss_pred CC----CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCcEEeC
Q 007286 352 TP----TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-----NPKIIHRDVKAANVLLD 422 (609)
Q Consensus 352 ~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~ 422 (609)
.. ...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+++ .++|+||||||+||+++
T Consensus 102 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~ 176 (337)
T 3mdy_A 102 KGTGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176 (337)
T ss_dssp ESCGGGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC
T ss_pred cCCCCCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC
Confidence 76 6789999999999999999753 3899999999999999999999762 34899999999999999
Q ss_pred CCCcEEEcccccceeeccCCcce---eecccccccccCcccccCCCCCcc------hhhHHHHHHHHHHHhC--------
Q 007286 423 EDFEAVVGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTGKSSER------TDVFGYGIMLLELVTG-------- 485 (609)
Q Consensus 423 ~~~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~Gv~l~elltg-------- 485 (609)
.++.+||+|||+++......... .....||+.|+|||.+.+...+.+ +|||||||++|||+||
T Consensus 177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999999998764332221 124569999999999987766654 9999999999999999
Q ss_pred --CCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 486 --QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 486 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
+.||......... . ............ .+..... .....+..+.+++.+||+.||++|||+.+|++.|+.
T Consensus 257 ~~~~p~~~~~~~~~~---~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPS---Y-EDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCCCTTTTTSCSSCC---H-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccccHhhhcCCCCc---h-hhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 5555432221111 1 111111111111 1111111 123677889999999999999999999999999987
Q ss_pred C
Q 007286 563 E 563 (609)
Q Consensus 563 ~ 563 (609)
.
T Consensus 329 l 329 (337)
T 3mdy_A 329 M 329 (337)
T ss_dssp H
T ss_pred H
Confidence 4
No 123
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-42 Score=350.62 Aligned_cols=258 Identities=24% Similarity=0.345 Sum_probs=189.6
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHh--ccCCCcceeeeEeeCCC----cc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFCTTPT----ER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~ 356 (609)
.++|...+.||+|+||.||+|++. |+.||||++.. .....+.+|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 367899999999999999999875 89999999853 245678888888877 78999999999997766 67
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCcEEeCCCCcEE
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 428 (609)
++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 9999999999999999753 3788889999999999999999 77 999999999999999999999
Q ss_pred EcccccceeeccCCcce---eecccccccccCcccccCC------CCCcchhhHHHHHHHHHHHhC----------CCCC
Q 007286 429 VGDFGLAKLVDVRKTNV---TTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTG----------QRAI 489 (609)
Q Consensus 429 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg----------~~p~ 489 (609)
|+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| ..||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 99999998765433321 2234699999999999776 445789999999999999999 5555
Q ss_pred CCCccccccchhHHHHHHHHhhhccchhhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 490 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
............. ...+....+.... ....+..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 229 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 229 YDLVPSDPSVEEM------------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTCC-CCCCC-C------------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred cccCCCCccHHHH------------HHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 4322111110000 0111111122222 2366678999999999999999999999999999865
Q ss_pred c
Q 007286 565 L 565 (609)
Q Consensus 565 ~ 565 (609)
.
T Consensus 297 ~ 297 (303)
T 3gxj_A 297 Q 297 (303)
T ss_dssp C
T ss_pred h
Confidence 3
No 124
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.8e-41 Score=352.11 Aligned_cols=252 Identities=22% Similarity=0.314 Sum_probs=198.4
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhcc--CCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv 359 (609)
..+|.+.+.||+|+||.||+|...+++.||||++.... .....+.+.+|+.++.++. ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 35699999999999999999998889999999986433 3334578999999999997 59999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|| +.+++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.+.
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 67889999998643 478889999999999999999999 999999999999996 5789999999998765
Q ss_pred cCCcc-eeecccccccccCcccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 440 VRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 440 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
..... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... ....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~- 277 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKL- 277 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHH-
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHHH-
Confidence 43222 2344579999999999865 46899999999999999999999999642210 0111
Q ss_pred HHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 508 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 508 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
..++++.....++...+..+.+++.+||+.||++|||+.|+++.
T Consensus 278 --------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 --------HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --------HHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------HHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11122211111122224578999999999999999999999864
No 125
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.2e-41 Score=345.27 Aligned_cols=257 Identities=25% Similarity=0.432 Sum_probs=204.6
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcE--EEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEE
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTK--VAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 359 (609)
++|...+.||+|+||.||+|.+. +|.. ||+|+++........+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67888999999999999999965 5664 4999997655555667899999999999 899999999999999999999
Q ss_pred eecccCchhhhhhhhcC------------CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007286 360 YPFMQNLSVAYRLREIK------------PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 427 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 427 (609)
|||+++|+|.+++.... .....+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997643 2234589999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHH
Q 007286 428 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHV 506 (609)
Q Consensus 428 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 506 (609)
||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ...
T Consensus 182 kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELY 251 (327)
T ss_dssp EECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHH
T ss_pred EEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------HHH
Confidence 99999999743321 11223457889999999988889999999999999999998 99999643221 111
Q ss_pred HHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 507 KKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 507 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
...... .........+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 252 ~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 252 EKLPQG----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHGGGT----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhhcC----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111111 11111223346789999999999999999999999999874
No 126
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9e-41 Score=346.18 Aligned_cols=246 Identities=21% Similarity=0.251 Sum_probs=204.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367889999999999999999975 68999999986421 233457788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++.... .++...++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 99999999999998643 388999999999999999999999 99999999999999999999999999998764
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. .....||+.|+|||++.+..++.++|||||||++|||+||+.||...... +........ ..
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~~---- 255 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIVSG-KV---- 255 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CC----
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--------HHHHHHHcC-CC----
Confidence 32 23457999999999999999999999999999999999999999643211 111111111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-----MSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-----~~evl~ 558 (609)
.++...+..+.+++.+|++.||++||+ +.||++
T Consensus 256 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 ------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112223467899999999999999998 677654
No 127
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-40 Score=336.72 Aligned_cols=259 Identities=20% Similarity=0.228 Sum_probs=199.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999975 688999999874322 22347789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
+||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998643 388999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
...........||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .............
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~--- 254 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--------VMGAHINQAIPRP--- 254 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------HHHHHHHSCCCCG---
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------HHHHHhccCCCCc---
Confidence 44333344557899999999999999999999999999999999999999743211 0111111100000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHHhcCC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRP-AMSEVVRMLEGEG 564 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-s~~evl~~L~~~~ 564 (609)
.......+..+.+++.+||+.||++|| +++++++.|+...
T Consensus 255 -----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 255 -----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 011222335788999999999999999 9999999998753
No 128
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.5e-41 Score=343.66 Aligned_cols=261 Identities=27% Similarity=0.384 Sum_probs=207.5
Q ss_pred HhcCCCccCcccccCCceEEEEEe------CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL------ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 355 (609)
..++|...+.||+|+||.||+|.+ .++..||||++...........+.+|+.++++++||||+++++++.....
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 457899999999999999999984 25778999999765555566789999999999999999999999999999
Q ss_pred ceEEeecccCchhhhhhhhcCCC---CCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEE
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPG---EPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVV 429 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl 429 (609)
.++||||+++|+|.+++...... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999875422 24488999999999999999999999 9999999999999984 456999
Q ss_pred cccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHH
Q 007286 430 GDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 430 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~ 256 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLE 256 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HHHH
Confidence 99999976543221 22334567899999999998999999999999999999999 99998643211 1111
Q ss_pred HHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 508 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 508 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
....... .......+..+.+++.+||+.||++||++.++++.|+..
T Consensus 257 ~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 257 FVTSGGR----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHTTCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCCC----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 1111111 111223346789999999999999999999999999763
No 129
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.5e-41 Score=339.32 Aligned_cols=258 Identities=20% Similarity=0.282 Sum_probs=206.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEee--CCCcceE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTERLL 358 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~l 358 (609)
.++|...+.||+|+||.||++... +|+.||+|.+.... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467888999999999999999975 68999999997533 2334577899999999999999999999874 4567899
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCcEEeCCCCcEEEcccc
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK-----IIHRDVKAANVLLDEDFEAVVGDFG 433 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~DfG 433 (609)
||||+++++|.+++.........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999987544455689999999999999999999998 7 9999999999999999999999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
+++....... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +....... +
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~i~~-~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--------ELAGKIRE-G 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-T
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--------HHHHHHhh-c
Confidence 9986643221 223356899999999999989999999999999999999999998743211 11111111 1
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
.. .......+..+.+++.+||+.+|++||++.||++.+..
T Consensus 232 ~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 KF---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cc---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 11 01122334678999999999999999999999987654
No 130
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.1e-40 Score=340.54 Aligned_cols=270 Identities=23% Similarity=0.323 Sum_probs=211.7
Q ss_pred ccCHHHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHh--ccCCCcceeeeEe
Q 007286 273 RYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISV--AVHRNLLRLIGFC 350 (609)
Q Consensus 273 ~~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~ 350 (609)
..++.......++|...+.||+|+||+||+|++ +|+.||||++.. .....+.+|.+++.. ++||||+++++++
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~ 105 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAAD 105 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc----hhHHHHHHHHHHHHHhhcCCCcEEEEEeee
Confidence 344444556678999999999999999999998 589999999863 345678889999887 7899999999999
Q ss_pred eCCC----cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCc
Q 007286 351 TTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--------EHCNPKIIHRDVKAAN 418 (609)
Q Consensus 351 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~N 418 (609)
.... ..++||||+++|+|.+++... .+++..++.++.|++.||.||| +. +|+||||||+|
T Consensus 106 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~N 177 (342)
T 1b6c_B 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKN 177 (342)
T ss_dssp ECCCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGG
T ss_pred cccCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHH
Confidence 8776 789999999999999999753 3899999999999999999999 77 99999999999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcc---eeecccccccccCcccccCC------CCCcchhhHHHHHHHHHHHhC----
Q 007286 419 VLLDEDFEAVVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLSTG------KSSERTDVFGYGIMLLELVTG---- 485 (609)
Q Consensus 419 Ill~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~Gv~l~elltg---- 485 (609)
|+++.++.+||+|||+++........ ......||+.|+|||.+.+. .++.++|||||||++|||+||
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~ 257 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence 99999999999999999877544332 12345699999999999765 234789999999999999999
Q ss_pred ------CCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCC-CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 486 ------QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKN-YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 486 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..||......... ...+..... ... ..+.+... .....+..+.+++.+||+.||++|||+.+|++
T Consensus 258 ~~~~~~~~p~~~~~~~~~~---~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 258 GIHEDYQLPYYDLVPSDPS---VEEMRKVVC-EQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 329 (342)
T ss_dssp TBCCCCCCTTTTTSCSSCC---HHHHHHHHT-TSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CcccccccCccccCcCccc---HHHHHHHHH-HHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 6676543221111 111111111 111 11111111 12356778999999999999999999999999
Q ss_pred HHhcC
Q 007286 559 MLEGE 563 (609)
Q Consensus 559 ~L~~~ 563 (609)
.|+.+
T Consensus 330 ~L~~i 334 (342)
T 1b6c_B 330 TLSQL 334 (342)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
No 131
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-41 Score=349.34 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=203.5
Q ss_pred HHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCc
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 355 (609)
....++|...+.||+|+||+||+|+++ +|+.||||+++... .......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 456688999999999999999999985 68999999997421 123456788899999876 89999999999999999
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999997643 388999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
+...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ..........
T Consensus 166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~-- 234 (345)
T 1xjd_A 166 KENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDN-- 234 (345)
T ss_dssp BCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCC--
T ss_pred hhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCC--
Confidence 8643222 2234567999999999999999999999999999999999999999743221 1111111110
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH-HHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS-EVV 557 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~-evl 557 (609)
. .++...+..+.+++.+|++.||++||++. ++.
T Consensus 235 -----~----~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -----P----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----C----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----C----CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 11122346789999999999999999987 543
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.2e-40 Score=342.56 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=194.5
Q ss_pred HhcCCCccCcccccCCceEEEEEe----CCCcEEEEEEeccCC---CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
..++|...+.||+|+||.||+++. .+|+.||+|+++... .......+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 356899999999999999999997 478999999997532 1233456789999999999999999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++|+|.+++.... .++...+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 9999999999999999997633 378889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .........
T Consensus 168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~-- 236 (327)
T 3a62_A 168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--------KTIDKILKC-- 236 (327)
T ss_dssp C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHT--
T ss_pred ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhC--
Confidence 97543221 2233457999999999999989999999999999999999999999743221 111111110
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 558 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~ 558 (609)
. ...+...+..+.+++.+||+.+|++|| ++.|+++
T Consensus 237 -------~--~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 -------K--LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -------C--CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -------C--CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 011122346789999999999999999 6777765
No 133
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.6e-41 Score=347.47 Aligned_cols=272 Identities=25% Similarity=0.314 Sum_probs=210.6
Q ss_pred hcCCCccCcccccCCceEEEEEe-----CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee--CCCc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~ 355 (609)
.++|...+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. ....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 46788899999999999999994 36889999999653 3444567999999999999999999999886 4456
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 889999999999999997632 2389999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCcc--eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 436 KLVDVRKTN--VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 436 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
+........ ......||+.|+|||.+.+..++.++||||||+++|||+||+.||............ .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~---~~~~~~~~~ 251 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG---CERDVPALS 251 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-------CCHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc---cccccccHH
Confidence 977543322 223345888899999999889999999999999999999999998532211000000 000000000
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
.....+............+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111111122223344578999999999999999999999999998853
No 134
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-40 Score=341.01 Aligned_cols=250 Identities=19% Similarity=0.269 Sum_probs=180.6
Q ss_pred cCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCCcceeeeEeeCCCcceEEeecccCc
Q 007286 289 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQNL 366 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 366 (609)
.+.||+|+||+||+|.+. +|+.||||++.. .....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 689999999964 24577889999999997 999999999999999999999999999
Q ss_pred hhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---cEEEcccccceeeccCCc
Q 007286 367 SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---EAVVGDFGLAKLVDVRKT 443 (609)
Q Consensus 367 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DfGla~~~~~~~~ 443 (609)
+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++......
T Consensus 92 ~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 163 (325)
T 3kn6_A 92 ELFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN- 163 (325)
T ss_dssp BHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence 999999863 3489999999999999999999999 999999999999997665 89999999998764332
Q ss_pred ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccc
Q 007286 444 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNL 523 (609)
Q Consensus 444 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 523 (609)
.......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......... ...+........ .. ..
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~~~~~~~~i~~~-~~------~~ 235 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT-SAVEIMKKIKKG-DF------SF 235 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC-CHHHHHHHHTTT-CC------CC
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc-cHHHHHHHHHcC-CC------CC
Confidence 22334568999999999999999999999999999999999999997533211110 111111111111 00 00
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 524 NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 524 ~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........+..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00001223468899999999999999999999874
No 135
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.4e-40 Score=339.74 Aligned_cols=265 Identities=26% Similarity=0.391 Sum_probs=200.4
Q ss_pred HHHHHhcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeC
Q 007286 278 ELQLATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT 352 (609)
Q Consensus 278 el~~~~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 352 (609)
++....++|...+.||+|+||.||+|.+. ++..||||+++... .....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 34456678999999999999999999864 34589999987433 23345778999999999999999999999977
Q ss_pred CCc-----ceEEeecccCchhhhhhhhcC--CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC
Q 007286 353 PTE-----RLLVYPFMQNLSVAYRLREIK--PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF 425 (609)
Q Consensus 353 ~~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 425 (609)
... .++||||+++|+|.+++.... .....+++..++.++.|+++||.|||++ +|+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCC
Confidence 653 489999999999999985432 2345689999999999999999999999 999999999999999999
Q ss_pred cEEEcccccceeeccCCc-ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHH
Q 007286 426 EAVVGDFGLAKLVDVRKT-NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 426 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~ 503 (609)
.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||+| |..||....... ..
T Consensus 185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~ 259 (313)
T 3brb_A 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-----MY 259 (313)
T ss_dssp CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----HH
T ss_pred cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-----HH
Confidence 999999999987643322 12233457889999999999999999999999999999999 888886433211 11
Q ss_pred HHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 504 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 504 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
. ....... .......+..+.+++.+||+.+|++|||+.++++.|+..
T Consensus 260 ~---~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 260 D---YLLHGHR----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp H---HHHTTCC----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---HHHcCCC----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 1111110 111223346789999999999999999999999999873
No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-40 Score=339.72 Aligned_cols=254 Identities=23% Similarity=0.300 Sum_probs=194.5
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc---
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER--- 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~--- 356 (609)
.++|.+.+.||+|+||.||+|.+ .+++.||||+++.... ......+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46789999999999999999997 5789999999975332 22346788999999999999999999998765544
Q ss_pred -eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 357 -LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 357 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
++||||+++|+|.++++... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 89999999999999997643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc--ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 436 KLVDVRKT--NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 436 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
+....... .......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ..........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--------~~~~~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--------SVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCC
Confidence 87654322 2223456899999999999999999999999999999999999999653321 1111111111
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.... .. .....+..+.+++.+||+.||++||++.+++.
T Consensus 236 ~~~~---~~----~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPP---SA----RHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCH---HH----HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCc---cc----ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1000 00 01113467899999999999999997766654
No 137
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.3e-40 Score=339.55 Aligned_cols=253 Identities=20% Similarity=0.244 Sum_probs=206.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-----chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|.+.+.||+|+||.||+|... +|+.||||.+...... ...+.+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467889999999999999999975 6899999998753322 1367899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 432 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 432 (609)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 9999999999999999753 3489999999999999999999999 999999999999999888 7999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +........
T Consensus 164 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSV 233 (321)
T ss_dssp TTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTT
T ss_pred ccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhc
Confidence 9998765432 223456899999999999999999999999999999999999999643211 111111110
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
. ...++... ...+..+.+++.+|++.||++|||+.|+++.
T Consensus 234 ~---~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 S---YDFDEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C---CCCCHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c---cccChhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00000000 1123578999999999999999999999863
No 138
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=334.76 Aligned_cols=262 Identities=19% Similarity=0.258 Sum_probs=198.8
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
++|...+.||+|+||+||+|.+. +|+.||||++...... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57889999999999999999985 5899999998654322 235678899999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 99999999988653 3388999999999999999999999 9999999999999999999999999999876533
Q ss_pred CcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH-----------
Q 007286 442 KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL----------- 509 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 509 (609)
.. ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||........ .......
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-----LYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----HHHHHHHHCSCCHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHHHhcccccccccc
Confidence 22 2334568999999999876 6789999999999999999999999975432211 0111100
Q ss_pred -hhhccchhhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 510 -EREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 510 -~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...........+...... .+..+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000000000000000 0123457899999999999999999999986
No 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.2e-40 Score=335.47 Aligned_cols=250 Identities=24% Similarity=0.340 Sum_probs=208.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.+.|...+.||+|+||.||+|... +++.||||++.........+.+.+|+.+++.++||||+++++++......++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456888999999999999999964 6899999999765555667889999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 9999999999864 2488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccc
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDR 521 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (609)
.. ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ......... . .+
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~-~-----~~ 237 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLFLIPKN-N-----PP 237 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHS-C-----CC
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--------HHHHHhhcC-C-----CC
Confidence 22 233456899999999999999999999999999999999999998643211 111111110 0 01
Q ss_pred cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 522 NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 522 ~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
......+..+.+++.+||+.+|++|||+.++++.
T Consensus 238 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 ----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1112234578999999999999999999999864
No 140
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-40 Score=344.83 Aligned_cols=248 Identities=27% Similarity=0.358 Sum_probs=199.7
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.+.|...+.||+|+||+||+|+. .+|+.||||++..... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588889999999999999996 5789999999864322 22346788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||++ |++.+.+.... ..+++..+..++.|+++||.|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 133 ~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp EECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred EecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 99998 57777775432 3489999999999999999999999 99999999999999999999999999998654
Q ss_pred cCCcceeecccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
.. ....||+.|+|||++. ...++.++|||||||++|||+||+.||...... ...........
T Consensus 206 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--------~~~~~~~~~~~-- 270 (348)
T 1u5q_A 206 PA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNES-- 270 (348)
T ss_dssp SB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSCC--
T ss_pred CC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhcCC--
Confidence 32 2346899999999984 567899999999999999999999998643211 11111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
+.. .....+..+.+++.+||+.+|++|||+.++++.
T Consensus 271 ----~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 271 ----PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ----CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ----CCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 001 111234578899999999999999999999864
No 141
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.7e-40 Score=331.63 Aligned_cols=252 Identities=21% Similarity=0.270 Sum_probs=204.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++.... .....+.+.+|+.++++++||||+++++++......++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999975 68999999986433 3334577889999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~ 437 (609)
||+++++|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999998887642 388999999999999999999999 9999999999999986655 99999999987
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
..... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... .......... ..
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~-~~- 225 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQIKAGA-YD- 225 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTC-CC-
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHHHHhcc-cc-
Confidence 65332 223456899999999999999999999999999999999999999643211 1111111110 00
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.........+..+.+++.+|++.||++|||+.|+++
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 226 -----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000011223467899999999999999999999986
No 142
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=345.10 Aligned_cols=268 Identities=26% Similarity=0.367 Sum_probs=198.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHH--HhccCCCcceeeeEee-----CCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMI--SVAVHRNLLRLIGFCT-----TPT 354 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l--~~l~H~niv~l~~~~~-----~~~ 354 (609)
..++|...+.||+|+||+||+|++ +++.||||++... ....+..|.++. ..++||||+++++.+. ...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 356889999999999999999987 6899999998632 344555555554 4589999999998553 223
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCcEEeCCCCcEE
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC------NPKIIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~k 428 (609)
..++||||+++|+|.+++.... .++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 5689999999999999997632 588889999999999999999873 33899999999999999999999
Q ss_pred EcccccceeeccCC-------cceeecccccccccCcccccC-------CCCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007286 429 VGDFGLAKLVDVRK-------TNVTTQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVTGQRAIDFSRL 494 (609)
Q Consensus 429 l~DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~ 494 (609)
|+|||+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.|+.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765322 112224569999999999976 3567899999999999999999877643322
Q ss_pred ccccchhHHH---------HHHHHhhhccchhhccccccCC--CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 495 EEEDDVLLLD---------HVKKLEREKRLDAIVDRNLNKN--YNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 495 ~~~~~~~~~~---------~~~~~~~~~~~~~~~d~~l~~~--~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.......... .......... ..+.+... .....+..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 2111111110 0011110000 01111111 1234667899999999999999999999999999874
No 143
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=342.79 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=202.6
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-------chHHHHHHHHHHHHhccCCCcceeeeEeeCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-------GGDAAFQREVEMISVAVHRNLLRLIGFCTTP 353 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 353 (609)
..++|...+.||+|+||+||+|.+. +|+.||||++...... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4568999999999999999999964 6899999999753311 1234677899999999999999999999999
Q ss_pred CcceEEeecccCc-hhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007286 354 TERLLVYPFMQNL-SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 432 (609)
Q Consensus 354 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 432 (609)
+..++||||+.+| +|..++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999987632 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 511 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (609)
|+++....... .....||+.|+|||.+.+..+ +.++|||||||++|||+||+.||.....
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------------- 235 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------------- 235 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------------
Confidence 99987654322 334569999999999988877 8899999999999999999999963211
Q ss_pred hccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 512 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 512 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
........ +...+..+.+++.+||+.||++|||+.++++.
T Consensus 236 ------~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ------TVEAAIHP--PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ------GTTTCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ------HHhhccCC--CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 11123578999999999999999999999874
No 144
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=345.98 Aligned_cols=261 Identities=18% Similarity=0.214 Sum_probs=203.4
Q ss_pred hcCCCccCcccccCCceEEEEEeCC---------CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcce--------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLAD---------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLR-------- 345 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~-------- 345 (609)
.++|.+.+.||+|+||.||+|++.. ++.||||++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3678999999999999999999763 789999998643 46889999999999999998
Q ss_pred -------eeeEeeC-CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007286 346 -------LIGFCTT-PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAA 417 (609)
Q Consensus 346 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~ 417 (609)
+++++.. ....++||||+ +++|.+++.... ...+++..++.++.|++.||.|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5666655 67789999999 999999998642 23489999999999999999999999 9999999999
Q ss_pred cEEeCCCC--cEEEcccccceeeccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 007286 418 NVLLDEDF--EAVVGDFGLAKLVDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 489 (609)
Q Consensus 418 NIll~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~ 489 (609)
||+++.++ .+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 8999999999876532211 123347999999999999999999999999999999999999999
Q ss_pred CCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 490 DFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
....... ..+........ .......+.... ....+..+.+++.+||+.||++|||+.+|++.|+..
T Consensus 269 ~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 269 TNCLPNT---EDIMKQKQKFV--DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp GGGTTCH---HHHHHHHHHHH--HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccCCcCH---HHHHHHHHhcc--CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 7433111 11111111111 111111111100 011236789999999999999999999999999873
No 145
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=343.69 Aligned_cols=254 Identities=17% Similarity=0.163 Sum_probs=206.4
Q ss_pred HHHhcCCCccCcccccCCceEEEEE------eCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc---CCCcceeeeEe
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGV------LADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFC 350 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~ 350 (609)
+...++|.+.+.||+|+||+||+|. ..+++.||||++.. ....++..|++++..++ |+||+++++++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP----ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS----CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC----CChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 3456788999999999999999994 34688999999964 23567888898888887 99999999999
Q ss_pred eCCCcceEEeecccCchhhhhhhhcCC-CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC------
Q 007286 351 TTPTERLLVYPFMQNLSVAYRLREIKP-GEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE------ 423 (609)
Q Consensus 351 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 423 (609)
...+..++||||+++|+|.+++..... ....+++..++.++.|+++||+|||++ +|+||||||+|||++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 999999999999999999999976432 245599999999999999999999999 9999999999999998
Q ss_pred -----CCcEEEcccccceeeccC-CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007286 424 -----DFEAVVGDFGLAKLVDVR-KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE 497 (609)
Q Consensus 424 -----~~~~kl~DfGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 497 (609)
++.+||+|||+++.+... .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~- 292 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE- 292 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-
Confidence 899999999999876432 2334455679999999999999999999999999999999999999985322110
Q ss_pred cchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHHhcC
Q 007286 498 DDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDR-PAMSEVVRMLEGE 563 (609)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~R-Ps~~evl~~L~~~ 563 (609)
... ...+.... ....+.+++..|++.+|.+| |++.++.+.|++.
T Consensus 293 ---------------~~~----~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 293 ---------------CKP----EGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---------------EEE----CSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---------------eee----chhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 001 11111111 23567788899999999998 6788888888764
No 146
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.6e-40 Score=346.33 Aligned_cols=210 Identities=20% Similarity=0.263 Sum_probs=183.2
Q ss_pred ccccCHHHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-----CCCcc
Q 007286 271 LKRYSWRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-----HRNLL 344 (609)
Q Consensus 271 ~~~~~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-----H~niv 344 (609)
...+++++.+...++|.+.+.||+|+||+||+|++. +++.||||+++. .......+..|+.+++.+. ||||+
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 455667777778899999999999999999999974 689999999963 2334567788999999986 99999
Q ss_pred eeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-
Q 007286 345 RLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE- 423 (609)
Q Consensus 345 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 423 (609)
++++++...+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999999999999 8999999986432 3488999999999999999999999 9999999999999975
Q ss_pred ------------------------CCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHH
Q 007286 424 ------------------------DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIML 479 (609)
Q Consensus 424 ------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l 479 (609)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 789999999999865432 2345689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC
Q 007286 480 LELVTGQRAIDFS 492 (609)
Q Consensus 480 ~elltg~~p~~~~ 492 (609)
|||+||+.||...
T Consensus 250 ~ell~g~~pf~~~ 262 (360)
T 3llt_A 250 AELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHSSCSCCCS
T ss_pred HHHHHCCCCCCCC
Confidence 9999999999753
No 147
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-40 Score=327.17 Aligned_cols=246 Identities=21% Similarity=0.318 Sum_probs=180.1
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
++|++.+.||+|+||.||+|.+. +|+.||+|++.... .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57899999999999999999964 68999999986532 2334678899999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+ ++++.+.+... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 93 e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 66777777653 3389999999999999999999999 999999999999999999999999999986643
Q ss_pred CCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||...... ......... .
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~-~----- 228 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--------VLFKNISNG-V----- 228 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHT-C-----
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhC-C-----
Confidence 22 2234468999999999987765 78999999999999999999999743321 111111111 0
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...+...+..+.+++.+|++.||++|||+.|+++
T Consensus 229 -----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 -----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0111223457889999999999999999999975
No 148
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=346.62 Aligned_cols=246 Identities=20% Similarity=0.231 Sum_probs=195.0
Q ss_pred cCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeecccCch
Q 007286 289 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLS 367 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 367 (609)
.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 568999999999999974 68999999997532 3456789999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe--CCCCcEEEcccccceeeccCCcce
Q 007286 368 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL--DEDFEAVVGDFGLAKLVDVRKTNV 445 (609)
Q Consensus 368 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DfGla~~~~~~~~~~ 445 (609)
|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 99988652 23488999999999999999999999 99999999999999 6778999999999997754322
Q ss_pred eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccccC
Q 007286 446 TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNK 525 (609)
Q Consensus 446 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 525 (609)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...... +.......... ....
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~--~~~~----- 309 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRW--DLED----- 309 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCC--CSCS-----
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccC--CCCh-----
Confidence 23346999999999999889999999999999999999999999643221 11111111100 0000
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 526 NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 526 ~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
......+..+.+++.+|++.||++|||+.|+++
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 001123467899999999999999999999986
No 149
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.1e-40 Score=334.28 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=202.1
Q ss_pred hcCCCccCcccccCCceEEEEEeCC-C-------cEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLAD-G-------TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~-g-------~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
.++|...+.||+|+||+||+|.+.. + ..||+|++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 4678889999999999999999653 3 57999998643 2345678999999999999999999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--------
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE-------- 426 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-------- 426 (609)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999863 23388999999999999999999999 9999999999999998887
Q ss_pred EEEcccccceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 427 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
+||+|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||+||..|+...... ...
T Consensus 160 ~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------~~~ 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------QRK 227 (289)
T ss_dssp EEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-------HHH
T ss_pred eeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-------HHH
Confidence 99999999865432 123458899999999987 67899999999999999999965554322111 011
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 567 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~~~~ 567 (609)
.......... ....+..+.+++.+||+.||++|||+.++++.|++.....
T Consensus 228 ~~~~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 228 LQFYEDRHQL------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHHHHTTCCC------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred HHHhhccCCC------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111111111 1111246789999999999999999999999999875433
No 150
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-40 Score=344.37 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=200.6
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcc
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 356 (609)
...++|...+.||+|+||+||+|+.. +|+.||||+++... .....+.+..|..++..+ +||||+++++++.+.+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 34578999999999999999999986 47899999997421 223456788999999887 799999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999998643 388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 170 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~---- 236 (353)
T 2i0e_A 170 ENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIMEH---- 236 (353)
T ss_dssp CCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC----
T ss_pred ccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhC----
Confidence 64322 22234567999999999999999999999999999999999999999743211 111111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
.+ .++...+..+.+++.+|++.||++||++
T Consensus 237 -----~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 237 -----NV--AYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -----CC--CCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred -----CC--CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00 1122334678999999999999999964
No 151
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.4e-40 Score=333.91 Aligned_cols=251 Identities=27% Similarity=0.381 Sum_probs=198.5
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-CcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-TERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ 360 (609)
..++|...+.||+|+||+||+|.+. |+.||||+++.. ...+.+.+|++++++++||||+++++++... +..++||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3567889999999999999999984 899999998643 3467899999999999999999999987554 4789999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 9999999999997532 12368888999999999999999999 999999999999999999999999999986543
Q ss_pred CCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
. .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||....... . .......
T Consensus 170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-----~---~~~~~~~------- 230 (278)
T 1byg_A 170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----V---VPRVEKG------- 230 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----H---HHHHTTT-------
T ss_pred c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----H---HHHHhcC-------
Confidence 2 122357889999999998999999999999999999999 999987533211 1 1111111
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.........+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 231 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 231 ---YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 11112223346789999999999999999999999999874
No 152
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.6e-40 Score=333.57 Aligned_cols=249 Identities=25% Similarity=0.397 Sum_probs=201.9
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
+.++|.+.+.||+|+||+||+|.+. ++..||||++.... .......+.+|+.++++++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578899999999999999999975 57799999985421 12235678899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999997643 388999999999999999999999 9999999999999999999999999998654
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..........
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~----- 223 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--------ETYKRISRVE----- 223 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC-----
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------HHHHHHHhCC-----
Confidence 322 223456899999999999999999999999999999999999999743221 1111111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
...+...+..+.+++.+|++.+|++|||+.|+++.
T Consensus 224 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 ------FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 01112234578899999999999999999999963
No 153
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=346.54 Aligned_cols=256 Identities=21% Similarity=0.271 Sum_probs=204.6
Q ss_pred hcCCCccCcccccCCceEEEEEe----CCCcEEEEEEeccCC---CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCC
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL----ADGTKVAVKRLTDFE---SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPT 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 354 (609)
.++|.+.+.||+|+||+||+++. .+|+.||||+++... .......+.+|++++..+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46789999999999999999997 368999999986422 122345677899999999 5999999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999997643 388999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
++..............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ ...........
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----QAEISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----HHHHHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----HHHHHHHHhcc
Confidence 98765444444455679999999999985 3478999999999999999999999974332211 11111111110
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVRML 560 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~~L 560 (609)
. ..+....+..+.+++.+||+.||++|| ++.|+++..
T Consensus 282 -------~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 -------E----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------C----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0 112223346788999999999999999 888888643
No 154
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-40 Score=334.20 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=200.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||+||+|.+. +++.||||++.... .......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999986 79999999997532 344567888999999998 899999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---------------
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED--------------- 424 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--------------- 424 (609)
|||+++|+|.+++.........+++..++.++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999986533334589999999999999999999999 99999999999999844
Q ss_pred ----CcEEEcccccceeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccc
Q 007286 425 ----FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDD 499 (609)
Q Consensus 425 ----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~ 499 (609)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|||++|.+++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999999766 56789999999999999999987754211
Q ss_pred hhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 500 VLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...... .... + ..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 236 -----~~~~~~-~~~~-----~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 -----QWHEIR-QGRL-----P----RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -----HHHHHH-TTCC-----C----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHH-cCCC-----C----CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 001111 1111 1 111223467899999999999999999999985
No 155
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.7e-40 Score=369.79 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=198.0
Q ss_pred CcccccCCceEEEEEeC---CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeecccC
Q 007286 290 NVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQN 365 (609)
Q Consensus 290 ~~LG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 365 (609)
+.||+|+||+||+|.+. +++.||||+++... .....++|.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 46789999997532 33446789999999999999999999999964 458899999999
Q ss_pred chhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCc--
Q 007286 366 LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKT-- 443 (609)
Q Consensus 366 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~-- 443 (609)
|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 9999999753 3488999999999999999999999 999999999999999999999999999987654322
Q ss_pred ceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhccchhhcccc
Q 007286 444 NVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRN 522 (609)
Q Consensus 444 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 522 (609)
.......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...... +..........
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~~~~i~~~~~-------- 590 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVTAMLEKGER-------- 590 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHHHHHTTCC--------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCC--------
Confidence 22233457889999999999999999999999999999999 99999643321 11111111111
Q ss_pred ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhc
Q 007286 523 LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEG 562 (609)
Q Consensus 523 l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~ 562 (609)
.......+.++.+++..||+.||++||++.+|++.|++
T Consensus 591 --~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 591 --MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11222345688999999999999999999999999986
No 156
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.5e-40 Score=354.28 Aligned_cols=248 Identities=25% Similarity=0.367 Sum_probs=204.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 357888999999999999999976 79999999986421 223456789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999998752 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
... ......||+.|+|||.+.+..+ +.++|||||||++|||+||+.||+..... .........
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--------~~~~~i~~~------ 231 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--------TLFKKICDG------ 231 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--------HHHHHHHTT------
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcC------
Confidence 432 2334579999999999988765 78999999999999999999999743321 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
... .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 232 ---~~~--~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 232 ---IFY--TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---CCC--CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---CcC--CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 000 11122357889999999999999999999986
No 157
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.8e-40 Score=344.79 Aligned_cols=252 Identities=21% Similarity=0.259 Sum_probs=191.5
Q ss_pred cCCCcc-CcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHH-hccCCCcceeeeEeeC----CCcc
Q 007286 284 DNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMIS-VAVHRNLLRLIGFCTT----PTER 356 (609)
Q Consensus 284 ~~~~~~-~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~----~~~~ 356 (609)
++|... +.||+|+||+||+|.+. +|+.||||++.. ...+.+|+.++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 455554 68999999999999975 689999999963 246778888874 5589999999998864 5568
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEcccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFG 433 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 433 (609)
++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 99999999999999997632 34589999999999999999999999 9999999999999997 7899999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
+++..... .......||+.|+|||++.+..++.++|||||||++|||+||+.||........... ....+. .+
T Consensus 210 ~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~i~----~~ 282 (400)
T 1nxk_A 210 FAKETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-MKTRIR----MG 282 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-HHHHHH----HT
T ss_pred cccccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-HHHHHH----cC
Confidence 99865432 223355789999999999999999999999999999999999999975432211111 111111 00
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
... .........+.++.+++.+||+.||++|||+.|+++.
T Consensus 283 ~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYE------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCC------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000112234678999999999999999999999974
No 158
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=330.71 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=184.3
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788899999999999999997 479999999986321 122357789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++... ...+++..++.++.|+++||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999999753 23489999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||......... ..+.
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----------------~~~~ 225 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL-----------------NKVV 225 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CC
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH-----------------HHHh
Confidence 3322 223456899999999999889999999999999999999999999754322110 0000
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.... ..+...+..+.+++.+|++.||++|||+.++++
T Consensus 226 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 226 LADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000 111223467889999999999999999999985
No 159
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.1e-41 Score=359.62 Aligned_cols=250 Identities=21% Similarity=0.243 Sum_probs=195.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccC--CCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDF--ESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
..++|+..+.||+|+||.||+|... +|+.||||++... ........+.+|+.+++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999975 6899999999742 233345678899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+ + +|+||||||+|||++.++.+||+|||+++.
T Consensus 226 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp EECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EEeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 999999999999997643 38999999999999999999998 7 999999999999999999999999999985
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
.... ........||+.|+|||++.+..++.++|||||||++|||+||+.||...... ......... .
T Consensus 299 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~-~--- 365 (446)
T 4ejn_A 299 GIKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILME-E--- 365 (446)
T ss_dssp TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-C---
T ss_pred ccCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhC-C---
Confidence 4322 22234567999999999999999999999999999999999999999643221 111111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 558 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~ 558 (609)
..++...+..+.+++.+||+.||++|| ++.|+++
T Consensus 366 -------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 366 -------IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 011222346789999999999999999 9998875
No 160
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=334.97 Aligned_cols=265 Identities=24% Similarity=0.300 Sum_probs=199.2
Q ss_pred HHhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC----CCchHHHHHHHHHHHHhcc---CCCcceeeeEeeC
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE----SPGGDAAFQREVEMISVAV---HRNLLRLIGFCTT 352 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 352 (609)
...++|+..+.||+|+||+||+|++ .+|+.||||++.... .......+.+|+++++.++ ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3567899999999999999999996 478999999986322 1222456778888877665 9999999999976
Q ss_pred CC-----cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcE
Q 007286 353 PT-----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEA 427 (609)
Q Consensus 353 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 427 (609)
.. ..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 54 4789999997 599999876432 3389999999999999999999999 99999999999999999999
Q ss_pred EEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 428 VVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 428 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
||+|||+++..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||....... .......
T Consensus 160 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----~~~~i~~ 233 (308)
T 3g33_A 160 KLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD----QLGKIFD 233 (308)
T ss_dssp EECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH----HHHHHHH
T ss_pred EEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHH
Confidence 99999999865432 22345678999999999999999999999999999999999999996533211 1111111
Q ss_pred HHhhhccchhh------ccccccC-------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 508 KLEREKRLDAI------VDRNLNK-------NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 508 ~~~~~~~~~~~------~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..... ..... ....+.. ...+..+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLP-PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCC-CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCC-ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11000 00000 0000000 001123467899999999999999999999985
No 161
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.2e-39 Score=343.13 Aligned_cols=265 Identities=22% Similarity=0.341 Sum_probs=191.7
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhcc-CCCcceeeeEeeCCC--cc
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPT--ER 356 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~ 356 (609)
..++|...+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999974 68999999986432 2334567889999999997 999999999997544 67
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||++ |+|...+... .++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999998 5888888752 388899999999999999999999 99999999999999999999999999998
Q ss_pred eeccC--------------------CcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccc
Q 007286 437 LVDVR--------------------KTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 495 (609)
Q Consensus 437 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~ 495 (609)
.+... .........||+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 76321 1112334579999999999976 67899999999999999999999999754321
Q ss_pred cccchhHHHHHHHHhhh--ccchhhc------------------cccccCCC------------CHHHHHHHHHHHHhcc
Q 007286 496 EEDDVLLLDHVKKLERE--KRLDAIV------------------DRNLNKNY------------NIQEVETMIQVALLCT 543 (609)
Q Consensus 496 ~~~~~~~~~~~~~~~~~--~~~~~~~------------------d~~l~~~~------------~~~~~~~l~~l~~~Cl 543 (609)
.. +.........+ ..+..+. .......+ ....+..+.+++.+||
T Consensus 238 ~~----~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 238 NQ----LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp HH----HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred HH----HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 11 11111000000 0000000 00000000 0022457899999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 007286 544 QASPEDRPAMSEVVRM 559 (609)
Q Consensus 544 ~~~P~~RPs~~evl~~ 559 (609)
+.||++|||+.|+++.
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999865
No 162
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.6e-40 Score=357.39 Aligned_cols=254 Identities=26% Similarity=0.330 Sum_probs=207.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
..++|...+.||+|+||.||+|++. +|+.||||++.... .......+..|+.++++++||||+++++++.+....++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3467888999999999999999985 69999999996421 12345678899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|..++.........+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.+
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999987654455689999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ ........... .
T Consensus 340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~----~~~~~~~i~~~-~---- 409 (543)
T 3c4z_A 340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRVLEQ-A---- 409 (543)
T ss_dssp CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC----HHHHHHHHHHC-C----
T ss_pred cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh----HHHHHHHHhhc-c----
Confidence 54322 23345799999999999999999999999999999999999999975432111 11111111110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMS 554 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~ 554 (609)
..++...+..+.+++.+|++.||++||++.
T Consensus 410 ------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 410 ------VTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ------cCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 011223346789999999999999999763
No 163
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8e-40 Score=337.02 Aligned_cols=264 Identities=21% Similarity=0.347 Sum_probs=200.1
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|...+.||+|+||.||+|... +|+.||||++...... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357888999999999999999976 5899999998654322 23466789999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++++|.++.... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999998886542 2389999999999999999999999 999999999999999999999999999986643
Q ss_pred CCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH-----------
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK----------- 508 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~----------- 508 (609)
.. .......||+.|+|||.+.+. .++.++|||||||++|||+||+.||........ .......
T Consensus 177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ----LYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHHHCSCCHHHHHH
T ss_pred Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH----HHHHHHHhCCCChhhhhH
Confidence 22 223345689999999999775 789999999999999999999999975432111 1111100
Q ss_pred HhhhccchhhccccccCCC-----CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 509 LEREKRLDAIVDRNLNKNY-----NIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 509 ~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
............+...... .+..+..+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000111111111111111 1123568999999999999999999999985
No 164
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.4e-40 Score=332.77 Aligned_cols=248 Identities=24% Similarity=0.373 Sum_probs=203.1
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeC--------
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT-------- 352 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------- 352 (609)
...+|+..+.||+|+||.||+|.+. +|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 3467889999999999999999986 79999999996432 357789999999999999999998753
Q ss_pred --------CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC
Q 007286 353 --------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED 424 (609)
Q Consensus 353 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 424 (609)
....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 344789999999999999997642 23488999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007286 425 FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 504 (609)
Q Consensus 425 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 504 (609)
+.+||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||+||..|+... ..
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~ 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SK 226 (284)
T ss_dssp TEEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HH
T ss_pred CCEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HH
Confidence 999999999998765432 223446899999999999999999999999999999999999886310 01
Q ss_pred HHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 505 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 505 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...... +..+.. ..+..+.+++.+||+.||++|||+.|+++.|+...
T Consensus 227 ~~~~~~---------~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 227 FFTDLR---------DGIISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHHH---------TTCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred HHHHhh---------cccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 111111 111111 12356889999999999999999999999998753
No 165
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.9e-40 Score=330.59 Aligned_cols=252 Identities=19% Similarity=0.253 Sum_probs=202.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-----CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-----PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|...+.||+|+||+||+|... +|+.||+|.++.... ....+.+.+|+.++++++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357889999999999999999986 689999999874321 12467899999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----cEEEccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF----EAVVGDF 432 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Df 432 (609)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 9999999999999999763 2389999999999999999999999 999999999999999877 8999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|++....... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~ 226 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------ETLTNISAV 226 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTT
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--------HHHHHhHhc
Confidence 9998764322 223456899999999999999999999999999999999999999643211 111111100
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. . ...... ....+..+.+++.+|++.||++|||+.++++
T Consensus 227 ~-~--~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 227 N-Y--DFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C-C--CCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-c--CCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 0 000000 0112357899999999999999999999986
No 166
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-40 Score=346.92 Aligned_cols=267 Identities=22% Similarity=0.273 Sum_probs=205.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||+||+|.+. +|..||+|++.........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467899999999999999999976 6899999999765555556789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|+++|+|.+++.... .+++..+..++.|++.||.|||+++ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999997643 3889999999999999999999832 7999999999999999999999999999755322
Q ss_pred CcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH-----------------
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD----------------- 504 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~----------------- 504 (609)
......||+.|+|||++.+..++.++|||||||++|||+||+.||...............
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 223456899999999999999999999999999999999999999753321100000000
Q ss_pred ----HHHHHhhhcc----chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 505 ----HVKKLEREKR----LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 505 ----~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+......... ...+.............+..+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000000 00000000001111123467899999999999999999999985
No 167
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.5e-40 Score=347.14 Aligned_cols=258 Identities=21% Similarity=0.233 Sum_probs=199.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHH-HHhccCCCcceeeeEeeCCCcceE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEM-ISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
.++|...+.||+|+||.||+|+.+ +++.||||++++.. .......+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467899999999999999999976 58899999997532 22334556677776 567899999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.+++.... .++...++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999997633 378889999999999999999999 9999999999999999999999999999854
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +........
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~------ 254 (373)
T 2r5t_A 190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNK------ 254 (373)
T ss_dssp BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHHS------
T ss_pred ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhc------
Confidence 322 22344567999999999999999999999999999999999999999643221 111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCccc
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEGLAE 567 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~~~~ 567 (609)
.+ .+....+..+.+++.+|++.||++||++.+.++.+....+..
T Consensus 255 ---~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~ 298 (373)
T 2r5t_A 255 ---PL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFS 298 (373)
T ss_dssp ---CC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGT
T ss_pred ---cc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcccc
Confidence 00 111223457899999999999999999977776776665443
No 168
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.1e-40 Score=334.64 Aligned_cols=258 Identities=29% Similarity=0.383 Sum_probs=198.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC--CCc--EEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA--DGT--KVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
.++|...+.||+|+||+||+|.+. +++ .||||+++... .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467889999999999999999863 333 68999886432 3345678999999999999999999999997755 8
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++|+||+++++|.+++.... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 89999999999999997632 3488999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 437 LVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 437 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~~~ 241 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--------QILHKIDKEG 241 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHTSC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--------HHHHHHHccC
Confidence 775433221 223457889999999988889999999999999999999 99998643211 1111111111
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
.........+..+.+++.+||+.+|++|||+.++++.|++..
T Consensus 242 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 242 ---------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ---------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 011112234467899999999999999999999999998754
No 169
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.7e-40 Score=328.18 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=202.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
.++|...+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|++++++++||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 467889999999999999999976 57799999987533 2346789999999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccceee
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~~ 438 (609)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999887633 388999999999999999999999 99999999999999 78899999999999876
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.... ......||+.|+|||.+.+ .++.++||||||+++|||+||+.||...... +........ ... .
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~-~~~-~ 226 (277)
T 3f3z_A 160 KPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREG-TFT-F 226 (277)
T ss_dssp CTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHC-CCC-C
T ss_pred cCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhC-CCC-C
Confidence 5432 2334568999999999865 4999999999999999999999999643221 111111111 000 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
... . ....+..+.+++.+|++.||++|||+.++++
T Consensus 227 ~~~-~----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 PEK-D----WLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHH-H----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Cch-h----hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0 0012467899999999999999999999975
No 170
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4e-40 Score=336.78 Aligned_cols=260 Identities=20% Similarity=0.263 Sum_probs=196.2
Q ss_pred cCCCcc-CcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~-~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 360 (609)
+.|.+. +.||+|+||+||+|... +++.||||++... .......+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 567764 78999999999999964 7899999999654 334567899999999884 7999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DfGla~~ 437 (609)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 9999999999997643 388999999999999999999999 9999999999999998776 99999999986
Q ss_pred eccCCc------ceeecccccccccCcccccC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch------
Q 007286 438 VDVRKT------NVTTQVRGTMGHIAPEYLST-----GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV------ 500 (609)
Q Consensus 438 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~------ 500 (609)
...... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 11223469999999999875 4588999999999999999999999975432210000
Q ss_pred -hHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 501 -LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 501 -~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........... .... ..... ....+..+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~i~~-~~~~-~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQE-GKYE-FPDKD-----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHH-CCCC-CCHHH-----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhc-cCcc-cCchh-----cccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00001111110 0000 00000 0112467899999999999999999999986
No 171
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=338.41 Aligned_cols=266 Identities=23% Similarity=0.356 Sum_probs=208.2
Q ss_pred HhcCCCccCcccccCCceEEEEEe-----CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC--
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL-----ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT-- 354 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-- 354 (609)
..++|...+.||+|+||.||+|++ .+|+.||||++.. ......+.+.+|++++++++||||+++++++...+
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 356788899999999999999984 3688999999975 33445678999999999999999999999986654
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 6889999999999999998642 3488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcce--eecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccc-------ccchhHHHH
Q 007286 435 AKLVDVRKTNV--TTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEE-------EDDVLLLDH 505 (609)
Q Consensus 435 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~-------~~~~~~~~~ 505 (609)
++......... .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... .........
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 98775433221 223457788999999998889999999999999999999999875321100 000000000
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
+.+.+............+..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 272 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 272 ---------LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp ---------HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011111111112233456889999999999999999999999999874
No 172
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.2e-40 Score=334.31 Aligned_cols=256 Identities=19% Similarity=0.243 Sum_probs=189.0
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHH-HHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAA-FQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~-~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|+..+.||+|+||+||+|... +|+.||||+++.......... +.++...++.++||||+++++++...+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 4578999999999999999999974 789999999975433333333 34444457888999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||++ |+|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 4888877654444456899999999999999999999853 89999999999999999999999999998764
Q ss_pred cCCcceeecccccccccCcccc----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYL----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
.... .....||+.|+|||.+ .+..++.++||||||+++|||+||+.||+...... ...........
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~- 231 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-------QQLKQVVEEPS- 231 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-------HHHHHHHHSCC-
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-------HHHHHHhccCC-
Confidence 3322 2334689999999996 56678999999999999999999999996422110 11111111110
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........+..+.+++.+|++.+|++|||+.|+++
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 --------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 01111223467899999999999999999999986
No 173
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.7e-40 Score=356.94 Aligned_cols=255 Identities=23% Similarity=0.311 Sum_probs=207.7
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
..++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|+.+++.++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4567999999999999999999975 69999999986421 23345678899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 262 VmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999997643 23489999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
.... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........ .......... .
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~-~----- 404 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKE-V----- 404 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHH-C-----
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhc-c-----
Confidence 5332 23345799999999999998999999999999999999999999975432111 0111111110 0
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRP-----AMSEVVR 558 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP-----s~~evl~ 558 (609)
...+....+..+.+++.+|++.||++|| ++.||++
T Consensus 405 -----~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 405 -----PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -----cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0112223346789999999999999999 6788774
No 174
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.1e-40 Score=342.55 Aligned_cols=257 Identities=19% Similarity=0.271 Sum_probs=202.5
Q ss_pred HHhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHH-HHhccCCCcceeeeEeeCCCcceE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEM-ISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
...++|...+.||+|+||+||+|.. .+|+.||||+++..........+..|..+ ++.++||||+++++++...+..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 4557788899999999999999997 47899999999765545555666667766 778899999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||+++ +|.+++.........+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999985 898888754334456899999999999999999999742 8999999999999999999999999999866
Q ss_pred ccCCcceeecccccccccCccccc----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 439 DVRKTNVTTQVRGTMGHIAPEYLS----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 439 ~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
... .......||+.|+|||++. ...++.++|||||||++|||+||+.||+...... ...........
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~ 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-------QQLKQVVEEPS 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-------HHHHHHHHSCC
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-------HHHHHHhcCCC
Confidence 422 1222346999999999964 3478999999999999999999999997432110 11111111110
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+ .......+..+.+++.+||+.||++|||+.|+++
T Consensus 276 ------~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 ------P---QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ------C---CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------C---CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 0011123467899999999999999999999986
No 175
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.9e-39 Score=348.82 Aligned_cols=261 Identities=20% Similarity=0.233 Sum_probs=194.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 354 (609)
.++|+..+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467899999999999999999965 68999999996432 2334577889999999999999999999996553
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||++++ +...+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 469999999875 4444432 278899999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE-- 512 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 512 (609)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ +...+.....+
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~----~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ----WNKVIEQLGTPCP 284 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHHHCSCCH
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhcCCCCH
Confidence 9876432 233456799999999999999999999999999999999999999975432110 11111100000
Q ss_pred -------ccc---------------hhhccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 513 -------KRL---------------DAIVDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 513 -------~~~---------------~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
... .......+.... .......+.+++.+||+.||++|||+.|+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000000000000 11235678999999999999999999999863
No 176
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-40 Score=350.10 Aligned_cols=244 Identities=14% Similarity=0.111 Sum_probs=192.2
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccC--CCCchHHHHHHHHH---HHHhccCCCcceee-------eE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDF--ESPGGDAAFQREVE---MISVAVHRNLLRLI-------GF 349 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~~E~~---~l~~l~H~niv~l~-------~~ 349 (609)
.++|...+.||+|+||+||+|++ .+|+.||||++... ......+.+.+|++ ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999999743 23445688999995 55566899999998 55
Q ss_pred eeCCCc-----------------ceEEeecccCchhhhhhhhcC---CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007286 350 CTTPTE-----------------RLLVYPFMQNLSVAYRLREIK---PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 409 (609)
Q Consensus 350 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 409 (609)
+...+. .++||||+ +|+|.+++.... .....+++..++.|+.|++.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 554432 78999999 689999997532 1223466788899999999999999999 99
Q ss_pred EecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCC-----------CCCcchhhHHHHHH
Q 007286 410 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-----------KSSERTDVFGYGIM 478 (609)
Q Consensus 410 vH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~Gv~ 478 (609)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 3344567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 479 LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 479 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+|||+||+.||........ ...+... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~-----------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGG-----------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CC-----------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccc-----------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999964322111 1111110 0112357899999999999999999999985
No 177
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=341.69 Aligned_cols=256 Identities=23% Similarity=0.290 Sum_probs=187.4
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCCcceeeeEee-------
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCT------- 351 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~------- 351 (609)
....+|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+.++.++. ||||+++++++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 34568899999999999999999975 6899999998543 2344577899999999996 999999999983
Q ss_pred -CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeCCCCcEE
Q 007286 352 -TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 352 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~k 428 (609)
.....++|+||+. |+|.+++..... ...+++..++.++.|++.||.|||+. + |+||||||+||+++.++.+|
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 3334789999996 789888875332 23489999999999999999999998 7 99999999999999999999
Q ss_pred EcccccceeeccCCcce-----------eecccccccccCcccc---cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007286 429 VGDFGLAKLVDVRKTNV-----------TTQVRGTMGHIAPEYL---STGKSSERTDVFGYGIMLLELVTGQRAIDFSRL 494 (609)
Q Consensus 429 l~DfGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~ 494 (609)
|+|||+++......... .....||+.|+|||.+ .+..++.++|||||||++|||+||+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765332211 1134589999999998 566789999999999999999999999864221
Q ss_pred ccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 495 EEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.. +................+.+++.+||+.+|++|||+.|+++.|+..
T Consensus 259 ~~---------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 259 LR---------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ----------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HH---------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 10 0000000011111224578999999999999999999999999875
No 178
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=340.29 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=194.8
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeec
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
++|...+.||+|+||+||+|... +++.||||++...........+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999976 78999999996543333333456799999999999999999999999999999999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCC
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRK 442 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~ 442 (609)
++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 98 5888888763 23488999999999999999999999 99999999999999999999999999998654322
Q ss_pred cceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh---ccchhh
Q 007286 443 TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE---KRLDAI 518 (609)
Q Consensus 443 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 518 (609)
.......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+...... ......
T Consensus 155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-----QLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCCCCTTTSTTG
T ss_pred -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCCChHhchhh
Confidence 22334468999999999876 568999999999999999999999997543211 11111111100 000000
Q ss_pred cc---------ccccCC----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 519 VD---------RNLNKN----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 519 ~d---------~~l~~~----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. +..... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 000000 01123467889999999999999999999986
No 179
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.7e-39 Score=331.76 Aligned_cols=256 Identities=19% Similarity=0.261 Sum_probs=200.2
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCCcceeeeEeeC--CCcceE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTT--PTERLL 358 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~l 358 (609)
.++|+..+.||+|+||+||+|.. .+++.||||++.. ...+.+.+|++++++++ ||||+++++++.. ....++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 36788999999999999999996 4789999999863 33578999999999997 9999999999987 566899
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC-cEEEccccccee
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF-EAVVGDFGLAKL 437 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DfGla~~ 437 (609)
||||+++++|..++.. ++...+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++.
T Consensus 111 v~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 9999999999998864 78889999999999999999999 999999999999999776 899999999987
Q ss_pred eccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
...... .....||..|+|||.+.+ ..++.++|||||||++|||+||+.||........ .+........ .....
T Consensus 181 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~---~l~~~~~~~~-~~~~~ 254 (330)
T 3nsz_A 181 YHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVRIAKVLG-TEDLY 254 (330)
T ss_dssp CCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH---HHHHHHHHHC-HHHHH
T ss_pred cCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH---HHHHHHHhcC-Cchhh
Confidence 654322 334568999999999877 6789999999999999999999999854322111 1111111100 00000
Q ss_pred hhcc-----------------------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 517 AIVD-----------------------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 517 ~~~d-----------------------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..++ ...........+..+.+++.+|++.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 00001111123568899999999999999999999986
No 180
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-40 Score=338.67 Aligned_cols=267 Identities=27% Similarity=0.368 Sum_probs=187.6
Q ss_pred HHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
....++|...+.||+|+||.||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 445678999999999999999999964 6899999998654444456778899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcC----CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 359 VYPFMQNLSVAYRLREIK----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
||||+++++|.+++.... .....+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 999999999999987521 1234589999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCC----cceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHH
Q 007286 435 AKLVDVRK----TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKL 509 (609)
Q Consensus 435 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 509 (609)
+....... ........||+.|+|||.+.+ ..++.++||||||+++|||+||+.||........ . ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~---~~~~ 240 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV----L---MLTL 240 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH----H---HHHH
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH----H---HHHh
Confidence 87654321 112234568999999999865 5689999999999999999999999975432110 0 0010
Q ss_pred hhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 510 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 510 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ...................+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 Q--NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp T--SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c--cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0 0000000000001111223357889999999999999999999985
No 181
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-39 Score=347.92 Aligned_cols=195 Identities=24% Similarity=0.349 Sum_probs=154.2
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-----Cc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 355 (609)
.++|.+.+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|+++++.++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999975 68999999986532 233457789999999999999999999998433 56
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||+. |+|..++... ..+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 899999985 6888888652 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc--------------------------ceeecccccccccCcccc-cCCCCCcchhhHHHHHHHHHHHhC
Q 007286 436 KLVDVRKT--------------------------NVTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTG 485 (609)
Q Consensus 436 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~elltg 485 (609)
+....... ......+||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643211 123445789999999986 456799999999999999999994
No 182
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1e-39 Score=329.61 Aligned_cols=247 Identities=23% Similarity=0.380 Sum_probs=196.7
Q ss_pred CCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeC----CCcceE
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTERLL 358 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~l 358 (609)
.|...+.||+|+||+||+|.+. ++..||+|.+.... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677788999999999999975 68899999987533 33445778999999999999999999998754 345789
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCcEEeC-CCCcEEEcccccc
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPK--IIHRDVKAANVLLD-EDFEAVVGDFGLA 435 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~DfGla 435 (609)
||||+++|+|.+++.... .+++..++.++.|++.||.|||+. + |+||||||+||+++ .++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 999999999999997643 388999999999999999999998 7 99999999999998 7899999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
...... ......||+.|+|||.+. +.++.++||||||+++|+|+||+.||...... .............
T Consensus 180 ~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 180 TLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA-------AQIYRRVTSGVKP 248 (290)
T ss_dssp GGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------HHHHHHHTTTCCC
T ss_pred cccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-------HHHHHHHhccCCc
Confidence 754332 233456899999999886 46999999999999999999999999643221 1111111111110
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. .....+..+.+++.+||+.||++|||+.|+++
T Consensus 249 -~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 -AS--------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -GG--------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cc--------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 11112257899999999999999999999986
No 183
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.6e-40 Score=335.83 Aligned_cols=259 Identities=18% Similarity=0.226 Sum_probs=203.9
Q ss_pred HHHHHhcCCCcc-CcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhcc-CCCcceeeeEeeCC
Q 007286 278 ELQLATDNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTP 353 (609)
Q Consensus 278 el~~~~~~~~~~-~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~ 353 (609)
..+...++|.+. +.||+|+||.||+|... +|+.||||++.... .......+.+|+.++..+. ||||+++++++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 344556677776 88999999999999976 68999999987532 2334678999999999985 69999999999999
Q ss_pred CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEc
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVG 430 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 430 (609)
...++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred CeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 9999999999999999998642 234589999999999999999999999 9999999999999998 7899999
Q ss_pred ccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007286 431 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 510 (609)
Q Consensus 431 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 510 (609)
|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......
T Consensus 177 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~ 246 (327)
T 3lm5_A 177 DFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--------ETYLNIS 246 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH
T ss_pred eCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHHHHH
Confidence 999998765322 223456999999999999999999999999999999999999999643321 1111111
Q ss_pred hhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 511 REKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 511 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. ............+..+.+++.+|++.||++|||+.++++
T Consensus 247 ~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 247 QV-------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HT-------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hc-------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00 000111112233467899999999999999999999985
No 184
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.9e-40 Score=366.19 Aligned_cols=260 Identities=21% Similarity=0.338 Sum_probs=207.5
Q ss_pred HHHHhcCCCccCcccccCCceEEEEEeC----CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC
Q 007286 279 LQLATDNFSEKNVLGQGGFGKVYRGVLA----DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT 354 (609)
Q Consensus 279 l~~~~~~~~~~~~LG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 354 (609)
.+...++|...+.||+|+||+||+|.+. .+..||||+++........+.|.+|+.++++++||||+++++++. .+
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~ 463 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 463 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence 3445577888999999999999999974 256799999876555555678999999999999999999999985 45
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 689999999999999999763 23488999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
++..............+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... +.........
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~~i~~~~ 609 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGRIENGE 609 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHHHHHHTC
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCC
Confidence 98775443333344567889999999998999999999999999999997 99998643221 1111111111
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcC
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGE 563 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~ 563 (609)
.. ..+...+..+.+++.+||+.||++|||+.++++.|+..
T Consensus 610 ~~----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 610 RL----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp CC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CC----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 11223346789999999999999999999999999873
No 185
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-39 Score=343.01 Aligned_cols=264 Identities=18% Similarity=0.229 Sum_probs=197.4
Q ss_pred HHHhcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-----
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----- 353 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 353 (609)
+...++|...+.||+|+||+||+|.+ .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 45677899999999999999999997 4799999999864322 224799999999999999999988432
Q ss_pred ---------------------------------CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHH
Q 007286 354 ---------------------------------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEY 400 (609)
Q Consensus 354 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~ 400 (609)
...++||||++ |+|.+.+.........+++..+..++.|+++||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 23779999998 58888777544445568999999999999999999
Q ss_pred HHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccceeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHH
Q 007286 401 LHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIM 478 (609)
Q Consensus 401 LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~ 478 (609)
||++ +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||.+.+. .++.++||||+||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999997 68899999999998764332 23345689999999998765 48999999999999
Q ss_pred HHHHHhCCCCCCCCccccccchhHHHHHHHHhhh---------ccchh-----hccccccCCCCHHHHHHHHHHHHhccC
Q 007286 479 LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE---------KRLDA-----IVDRNLNKNYNIQEVETMIQVALLCTQ 544 (609)
Q Consensus 479 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~d~~l~~~~~~~~~~~l~~l~~~Cl~ 544 (609)
+|||++|+.||....... .+...+.....+ ....+ .....+...+....+..+.+++.+||+
T Consensus 232 l~ell~g~~pf~~~~~~~----~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 232 FGELILGKPLFSGETSID----QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHhCCCCCCCCChHH----HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 999999999997533211 111111111000 00000 000001111122344678999999999
Q ss_pred CCCCCCCCHHHHHH
Q 007286 545 ASPEDRPAMSEVVR 558 (609)
Q Consensus 545 ~~P~~RPs~~evl~ 558 (609)
.||++|||+.|+++
T Consensus 308 ~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 308 YEPDLRINPYEAMA 321 (383)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999984
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=336.52 Aligned_cols=258 Identities=24% Similarity=0.317 Sum_probs=194.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 354 (609)
.++|...+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467888999999999999999974 69999999986432 2333567889999999999999999999997653
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+ +++|.+++... .++...+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 88999998752 378899999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 512 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 512 (609)
++..... .....||+.|+|||.+.+ ..++.++||||+||++|||+||+.||........ +..........
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----l~~i~~~~g~~~ 246 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ----LKEIMKVTGTPP 246 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHHHCCCC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhcCCCC
Confidence 9876432 334578999999999877 6799999999999999999999999975432110 11111000000
Q ss_pred -c---------------cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 -K---------------RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 -~---------------~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. .+.......+. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 00000000000 111233467899999999999999999999987
No 187
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.7e-39 Score=326.15 Aligned_cols=249 Identities=24% Similarity=0.360 Sum_probs=205.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||.||++.+. +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999986 58899999986432 233457788999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999887632 388999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +.........
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~------ 231 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNE------ 231 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTTC------
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhhcc------
Confidence 3222 233456899999999999889999999999999999999999999753321 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ......+..+.+++.+|++.||++|||+.|+++
T Consensus 232 ---~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 232 ---Y--SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ---C--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ---C--CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 011123357889999999999999999999986
No 188
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.1e-38 Score=332.91 Aligned_cols=259 Identities=22% Similarity=0.341 Sum_probs=205.9
Q ss_pred HHHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-------chHHHHHHHHHHHHhc-cCCCccee
Q 007286 276 WRELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-------GGDAAFQREVEMISVA-VHRNLLRL 346 (609)
Q Consensus 276 ~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-------~~~~~~~~E~~~l~~l-~H~niv~l 346 (609)
+.......++|.+.+.||+|+||.||+|.+. +|+.||||+++..... ...+.+.+|+.++.++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999985 7999999998643321 1135678999999999 79999999
Q ss_pred eeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc
Q 007286 347 IGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE 426 (609)
Q Consensus 347 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 426 (609)
++++......++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 99999999999999999999999999763 2389999999999999999999999 9999999999999999999
Q ss_pred EEEcccccceeeccCCcceeecccccccccCcccccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccch
Q 007286 427 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDV 500 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~ 500 (609)
+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... .
T Consensus 239 ikl~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~ 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-----I 311 (365)
T ss_dssp EEECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----H
T ss_pred EEEEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-----H
Confidence 9999999998765432 2334579999999999863 3588999999999999999999999964321 1
Q ss_pred hHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 501 LLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
......... ... ...+.. ...+..+.+++.+|++.||++|||+.++++
T Consensus 312 ---~~~~~i~~~-~~~-~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 ---LMLRMIMEG-QYQ-FSSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ---HHHHHHHHT-CCC-CCHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---HHHHHHHhC-CCC-CCCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111110 000 000000 012356899999999999999999999986
No 189
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5e-39 Score=345.89 Aligned_cols=261 Identities=18% Similarity=0.221 Sum_probs=205.3
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC-CcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR-NLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 360 (609)
.++|.+.+.||+|+||.||+|.+ .+++.||||++..... ...+..|++++..+.|+ ++..+..++......++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46899999999999999999997 4689999998864332 34578999999999874 5555566667778889999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 437 (609)
||+ +++|.+++.... ..+++..++.|+.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 83 e~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999 999999997532 3489999999999999999999999 99999999999999 6889999999999998
Q ss_pred eccCCcc------eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhh
Q 007286 438 VDVRKTN------VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLER 511 (609)
Q Consensus 438 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 511 (609)
+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ......+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~ 233 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKV 233 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhccc
Confidence 7543322 12256799999999999999999999999999999999999999975433211 111111111111
Q ss_pred hccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 512 EKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 512 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
...+..+.. ..+.++.+++..||+.+|++||++.+|++.|++..
T Consensus 234 ~~~~~~l~~---------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 234 ATSIEALCR---------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HSCHHHHHT---------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cccHHHHhc---------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111111111 12357899999999999999999999999998763
No 190
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.2e-40 Score=339.47 Aligned_cols=252 Identities=19% Similarity=0.290 Sum_probs=200.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|...+.||+|+||.||+|..+ +|+.||||++..... .+.+|++++.++ +||||+++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567999999999999999999976 689999999965332 235688888877 799999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC----CcEEEcccccc
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED----FEAVVGDFGLA 435 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla 435 (609)
|||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||+.++ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 9999999999998753 3489999999999999999999999 99999999999998543 35999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+........ ..
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~~~~i~~~-~~ 240 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT-----PEEILARIGSG-KF 240 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC-----HHHHHHHHHHC-CC
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC-----HHHHHHHHccC-Cc
Confidence 87654322 2334578999999999988889999999999999999999999997432111 11111111111 11
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.+........+..+.+++.+|++.||++|||+.++++
T Consensus 241 ------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 ------SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ------CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ------ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111112234467899999999999999999999985
No 191
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-39 Score=345.65 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=190.9
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-------CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-------SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 353 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 353 (609)
..++|...+.||+|+||+||+|... +++.||||++.... .......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4678999999999999999999975 68999999986421 11122358899999999999999999999864
Q ss_pred CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEc
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVG 430 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 430 (609)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.+ ..+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 4578999999999999888653 3489999999999999999999999 99999999999999754 459999
Q ss_pred ccccceeeccCCcceeecccccccccCcccccC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 431 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST---GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 431 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ +...+.
T Consensus 285 DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~----~~~~i~ 358 (419)
T 3i6u_A 285 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----LKDQIT 358 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC----HHHHHH
T ss_pred ecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH----HHHHHh
Confidence 99999876432 22345679999999999853 5788999999999999999999999974332111 111111
Q ss_pred HHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 508 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 508 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ..... .+.. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 359 ~----~~~~~--~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 S----GKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp T----TCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred c----CCCCC--Cchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0 00000 0000 0112467899999999999999999999986
No 192
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-39 Score=327.40 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=204.2
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||.||+|... +++.||||++.... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467889999999999999999976 57899999986421 123356789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++|+|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999997643 388999999999999999999999 99999999999999999999999999997654
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
... .....|++.|+|||.+.+..++.++||||||+++|||+||+.||...... .........
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~------- 227 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--------ETHRRIVNV------- 227 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHTT-------
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------HHHHHHhcc-------
Confidence 322 23456899999999999999999999999999999999999999743221 111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+. .++...+..+.+++.+|++.+|++||++.++++
T Consensus 228 ~~----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 228 DL----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 00 112223467899999999999999999999985
No 193
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=326.67 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=197.6
Q ss_pred CCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEeecc
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFM 363 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 363 (609)
.|....+||+|+||.||+|.+. +++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3445568999999999999974 68899999987533 345678999999999999999999999999999999999999
Q ss_pred cCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-CCcEEEcccccceeeccCC
Q 007286 364 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-DFEAVVGDFGLAKLVDVRK 442 (609)
Q Consensus 364 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DfGla~~~~~~~ 442 (609)
++++|.+++.... ....+++..+..++.|++.||.|||++ +|+||||||+||+++. ++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 9999999997642 233467888999999999999999999 9999999999999987 8999999999998764322
Q ss_pred cceeecccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhcc
Q 007286 443 TNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVD 520 (609)
Q Consensus 443 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 520 (609)
.......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||....... . ..... ...
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~-~~~-------- 241 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ---A---AMFKV-GMF-------- 241 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH---H---HHHHH-HHH--------
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh---H---HHHhh-ccc--------
Confidence 1223456899999999987643 8899999999999999999999985321110 0 00000 000
Q ss_pred ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 521 RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 521 ~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..........+..+.+++.+||+.||++||++.++++
T Consensus 242 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 242 -KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0011122233467899999999999999999999985
No 194
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.2e-40 Score=345.53 Aligned_cols=255 Identities=10% Similarity=0.014 Sum_probs=182.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhc--cCCCcceee-------eEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVA--VHRNLLRLI-------GFC 350 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l--~H~niv~l~-------~~~ 350 (609)
...|...+.||+|+||+||+|.+. +|+.||||++..... ....+.+.+|+.++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999975 789999999976432 23346677886655555 599988754 344
Q ss_pred eCC-----------------CcceEEeecccCchhhhhhhhcCCCCCCccHHHH------HHHHHHHHHHHHHHHhcCCC
Q 007286 351 TTP-----------------TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTR------KRVALGAARGLEYLHEHCNP 407 (609)
Q Consensus 351 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~ 407 (609)
..+ ...++||||++ |+|.+++..... .+++..+ ..++.|++.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 322 23799999999 899999986421 2344455 77889999999999999
Q ss_pred CeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhC
Q 007286 408 KIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTG 485 (609)
Q Consensus 408 ~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg 485 (609)
+|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986542 1224457799999999987 6799999999999999999999
Q ss_pred CCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 486 QRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 486 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+.||........... .....................+..+.+++.+||+.||++|||+.++++
T Consensus 290 ~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKGSW----------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTTCC----------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCcccccch----------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999975432211000 000000000111111111234568899999999999999999999974
No 195
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.4e-40 Score=340.76 Aligned_cols=270 Identities=20% Similarity=0.267 Sum_probs=199.6
Q ss_pred CHHHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCc----------hHHHHHHHHHHHHhccCCCcc
Q 007286 275 SWRELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG----------GDAAFQREVEMISVAVHRNLL 344 (609)
Q Consensus 275 ~~~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------~~~~~~~E~~~l~~l~H~niv 344 (609)
...++....++|...+.||+|+||.||+|...+|+.||||++....... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567888899999999999999999999998889999999986433221 137889999999999999999
Q ss_pred eeeeEeeC-----CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007286 345 RLIGFCTT-----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 419 (609)
Q Consensus 345 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 419 (609)
++++++.. ....++||||++ |+|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999843 235789999998 5777777642 33589999999999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED 498 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~ 498 (609)
+++.++.+||+|||+++..... .......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~- 242 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ- 242 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-
T ss_pred EEcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH-
Confidence 9999999999999999854332 22334568999999999876 6789999999999999999999999975432111
Q ss_pred chhHHHHHHHHhhhcc-----------chhhccccccC-------CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 499 DVLLLDHVKKLEREKR-----------LDAIVDRNLNK-------NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 499 ~~~~~~~~~~~~~~~~-----------~~~~~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ..+........ ........... .........+.+++.+|++.||++|||+.|+++
T Consensus 243 ---~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 243 ---L-NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp ---H-HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---H-HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1 11111000000 00000000000 001122467899999999999999999999986
No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.5e-39 Score=333.50 Aligned_cols=264 Identities=25% Similarity=0.339 Sum_probs=199.5
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------- 353 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------- 353 (609)
.++|...+.||+|+||+||+|++ .+|+.||||++.... .......+.+|+++++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999997 478999999986433 233456788999999999999999999998763
Q ss_pred -CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccc
Q 007286 354 -TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDF 432 (609)
Q Consensus 354 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 432 (609)
+..++||||+++ +|...+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 457899999986 6666665432 3389999999999999999999999 9999999999999999999999999
Q ss_pred ccceeeccCC---cceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH
Q 007286 433 GLAKLVDVRK---TNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK 508 (609)
Q Consensus 433 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 508 (609)
|+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...... .....+..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~ 243 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-----HQLALISQ 243 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHHHHH
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHH
Confidence 9998765322 222334568999999999876 45899999999999999999999999753321 11111111
Q ss_pred Hhhhcc---chhhccccc-------c-CCCC-HH------HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 509 LEREKR---LDAIVDRNL-------N-KNYN-IQ------EVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 509 ~~~~~~---~~~~~d~~l-------~-~~~~-~~------~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...... ......... . .... .. ....+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 244 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111000 000000000 0 0000 00 1356889999999999999999999986
No 197
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.7e-39 Score=334.32 Aligned_cols=265 Identities=19% Similarity=0.269 Sum_probs=193.2
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
...++|...+.||+|+||+||+|... +|+.||||+++.... ......+.+|++++++++||||+++++++......++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34578999999999999999999965 789999999964332 2234667899999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-----CCCCcEEEcccc
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL-----DEDFEAVVGDFG 433 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DfG 433 (609)
||||+++ +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||
T Consensus 111 v~e~~~~-~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCSE-EHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCCC-CHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999984 9999887633 388999999999999999999999 99999999999999 455669999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
+++...... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... ..+..........
T Consensus 183 ~a~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~ 257 (329)
T 3gbz_A 183 LARAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI----DQLFKIFEVLGLP 257 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCC
T ss_pred CccccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH----HHHHHHHHHhCCC
Confidence 998764322 223345689999999999874 4899999999999999999999999753321 1111111111000
Q ss_pred c--cchhhc-----ccc---ccCC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 K--RLDAIV-----DRN---LNKN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 ~--~~~~~~-----d~~---l~~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ...... ... .... ........+.+++.+|++.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 000000 000 0000 00113367889999999999999999999986
No 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=333.71 Aligned_cols=266 Identities=24% Similarity=0.286 Sum_probs=197.0
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC----chHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP----GGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 356 (609)
..++|...+.||+|+||.||+|.+. +|+.||||++...... ...+.+.+|+++++.++||||+++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999975 6899999998643211 1234688999999999999999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||+++ +|...+... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 787777652 23478889999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--c
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE--K 513 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 513 (609)
...... .......||+.|+|||.+.+. .++.++|||||||++|||++|.+||...... ..+.......... .
T Consensus 161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~----~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL----DQLTRIFETLGTPTEE 235 (346)
T ss_dssp TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCTT
T ss_pred eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----HHHHHHHHHcCCCChh
Confidence 764322 223345689999999999764 5899999999999999999999998653321 1111111111000 0
Q ss_pred cchh---hccc---cccCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 514 RLDA---IVDR---NLNKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 514 ~~~~---~~d~---~l~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.... ..+. ....... ...+..+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 0000 0000001 2234688999999999999999999999864
No 199
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.2e-39 Score=332.16 Aligned_cols=249 Identities=24% Similarity=0.358 Sum_probs=205.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|...+.||+|+||.||++.+. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999976 57899999986432 233457789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++.... .+++..++.++.|+++||.|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999887632 388999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... +.........
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~------ 257 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--------ETYLRIKKNE------ 257 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTC------
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHhcCC------
Confidence 3222 233456899999999999989999999999999999999999999743321 1111111110
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. ........+.+++.+||+.||++|||+.|+++
T Consensus 258 -~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 258 -YS----IPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -CC----CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CC----CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 11122357889999999999999999999986
No 200
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.6e-39 Score=329.03 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=202.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|...+.||+|+||+||+++.. +|+.||+|.+.... ......+.+|+.++++++||||+++++++......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 3467889999999999999999975 79999999997432 233467889999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla~~ 437 (609)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 86 QLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp CCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EcCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 9999999999987643 388999999999999999999999 99999999999999 7889999999999975
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... .......... .
T Consensus 159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~-~-- 224 (304)
T 2jam_A 159 EQNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGY-Y-- 224 (304)
T ss_dssp CCCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCC-C--
T ss_pred cCCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCC-C--
Confidence 4322 223446899999999999999999999999999999999999998643211 1111111110 0
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..........+..+.+++.+|++.||++|||+.|+++
T Consensus 225 ----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 225 ----EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0011112233467899999999999999999999986
No 201
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=324.86 Aligned_cols=252 Identities=22% Similarity=0.307 Sum_probs=200.0
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
...++|...+.||+|+||.||+|.+. +|+.||||.+... .....+.+|+.++..++||||+++++++......++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34578999999999999999999976 5899999999753 2356789999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 103 MEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred eecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 9999999999998742 23488999999999999999999999 99999999999999999999999999998765
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
.... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ...........
T Consensus 177 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~----- 242 (314)
T 3com_A 177 DTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------RAIFMIPTNPP----- 242 (314)
T ss_dssp TTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSCC-----
T ss_pred hhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHhcCCC-----
Confidence 3322 233456899999999999999999999999999999999999999643211 11111111100
Q ss_pred cccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 520 DRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 520 d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+.. ......+..+.+++.+||+.||++|||+.++++
T Consensus 243 -~~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 243 -PTF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -CCC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -ccc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 011123467899999999999999999999985
No 202
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.3e-39 Score=333.52 Aligned_cols=262 Identities=19% Similarity=0.307 Sum_probs=201.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-----Ccc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 356 (609)
.++|...+.||+|+||.||+|... +++.||||++...........+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999975 68899999997554444557899999999999999999999998654 357
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++|+||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 89999998 5898888652 388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcce--eecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 437 LVDVRKTNV--TTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 437 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
......... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ + ..+.......
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~-~~i~~~~~~~ 251 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ----L-NHILGILGSP 251 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGH----H-HHHHHHHCSC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHH----H-HHHHHHhCCC
Confidence 765432221 234579999999998754 4589999999999999999999999975432211 1 1111100000
Q ss_pred cc---h------------hhcccccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 514 RL---D------------AIVDRNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 514 ~~---~------------~~~d~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. . ....+... .......+..+.+++.+|++.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0 00000000 0001123467899999999999999999999986
No 203
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.5e-39 Score=326.71 Aligned_cols=253 Identities=21% Similarity=0.284 Sum_probs=199.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
..++|++.+.||+|+||.||+|.+. +|+.||+|++... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3567889999999999999999986 5899999998643 3445678999999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 96 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp ECCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999987632 3388999999999999999999999 999999999999999999999999998764321
Q ss_pred CCcceeecccccccccCcccc-----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 441 RKTNVTTQVRGTMGHIAPEYL-----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
. ........||+.|+|||.+ .+..++.++||||||+++|||+||+.||...... ............
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 240 (302)
T 2j7t_A 170 T-LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------RVLLKIAKSDPP 240 (302)
T ss_dssp H-HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHSCCC
T ss_pred c-ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHHHHhccCCc
Confidence 1 1112334689999999998 4667899999999999999999999998743221 111111111100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. ......+..+.+++.+||+.||++|||+.++++
T Consensus 241 -~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 -TL-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CC-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cc-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 011223467899999999999999999999985
No 204
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=7.9e-39 Score=347.03 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=202.5
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|.+.+.||+|+||+||+|... +|+.||||++.... .......+.+|++++++++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999975 78999999986421 2334678999999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC---CCCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---EDFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DfGla~~ 437 (609)
||+++|+|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999887643 389999999999999999999999 999999999999995 556799999999986
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
.... .......||+.|+|||++.+ .++.++||||+||++|+|+||+.||...... +.............
T Consensus 174 ~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 174 FQQN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFD 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSC
T ss_pred CCCC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 5432 22334579999999999875 5999999999999999999999999643221 11111111110000
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.......+..+.+++.+||+.+|++|||+.++++.
T Consensus 243 -------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 -------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00011234678999999999999999999999974
No 205
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.2e-39 Score=337.60 Aligned_cols=265 Identities=20% Similarity=0.236 Sum_probs=201.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc--------CCCcceeeeEee--
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV--------HRNLLRLIGFCT-- 351 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~-- 351 (609)
.++|.+.+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 478999999999999999999964 6889999999632 334577889999999886 788999999987
Q ss_pred --CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC----
Q 007286 352 --TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF---- 425 (609)
Q Consensus 352 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 425 (609)
.....++||||+.+ ++.+.+.... ...+++..++.++.||+.||.|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVLGH-HLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCCCC-BHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEeccCc-cHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 55678999999955 5545444322 234899999999999999999999864 799999999999999775
Q ss_pred ---------------------------------------------cEEEcccccceeeccCCcceeecccccccccCccc
Q 007286 426 ---------------------------------------------EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEY 460 (609)
Q Consensus 426 ---------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 460 (609)
.+||+|||+++..... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999876432 233468999999999
Q ss_pred ccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc-chhHHHHHHHHhhhc---------cchhhcccc--------
Q 007286 461 LSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED-DVLLLDHVKKLEREK---------RLDAIVDRN-------- 522 (609)
Q Consensus 461 ~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~d~~-------- 522 (609)
+.+..++.++|||||||++|||+||+.||......... ............... .........
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99999999999999999999999999999754432211 111111111110000 000000000
Q ss_pred -----------ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 523 -----------LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 523 -----------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
-........+..+.+++.+||+.||++|||+.|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001235677788999999999999999999999985
No 206
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.3e-38 Score=346.82 Aligned_cols=252 Identities=22% Similarity=0.294 Sum_probs=201.1
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC------------chHHHHHHHHHHHHhccCCCcceeee
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP------------GGDAAFQREVEMISVAVHRNLLRLIG 348 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~ 348 (609)
..++|.+.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999975 5889999998753211 34577899999999999999999999
Q ss_pred EeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCC---
Q 007286 349 FCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDF--- 425 (609)
Q Consensus 349 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 425 (609)
++.+....++||||+++|+|.+.+.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999987643 389999999999999999999999 999999999999998775
Q ss_pred cEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 426 EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 426 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
.+||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... +.
T Consensus 187 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~ 255 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DI 255 (504)
T ss_dssp SEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HH
T ss_pred cEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence 69999999998765432 233456999999999986 56999999999999999999999999753321 11
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.......... .+... ....+..+.+++.+|++.||++|||+.|+++
T Consensus 256 ~~~i~~~~~~---~~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 256 IKKVEKGKYY---FDFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHHCCCC---CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCC---CCccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111111100 00000 0112367899999999999999999999985
No 207
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3e-39 Score=344.85 Aligned_cols=200 Identities=25% Similarity=0.334 Sum_probs=167.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-----Cc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 355 (609)
.++|.+.+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999975 58899999997532 233457889999999999999999999999765 56
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||++ |+|.+++... ..+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999987 5999988752 3489999999999999999999999 9999999999999999999999999999
Q ss_pred eeeccCCc---------------------ceeecccccccccCcccc-cCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007286 436 KLVDVRKT---------------------NVTTQVRGTMGHIAPEYL-STGKSSERTDVFGYGIMLLELVTGQRAID 490 (609)
Q Consensus 436 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~elltg~~p~~ 490 (609)
+....... ......+||+.|+|||++ ....++.++|||||||++|||+||..|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 97653321 123456799999999986 55679999999999999999999766554
No 208
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.9e-39 Score=336.39 Aligned_cols=259 Identities=21% Similarity=0.299 Sum_probs=203.9
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCc----------------hHHHHHHHHHHHHhccCCCccee
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG----------------GDAAFQREVEMISVAVHRNLLRL 346 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~----------------~~~~~~~E~~~l~~l~H~niv~l 346 (609)
.++|.+.+.||+|+||.||+|.. +|+.||||++....... ..+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 89999999986422111 11789999999999999999999
Q ss_pred eeEeeCCCcceEEeecccCchhhhh------hhhcCCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcE
Q 007286 347 IGFCTTPTERLLVYPFMQNLSVAYR------LREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANV 419 (609)
Q Consensus 347 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NI 419 (609)
++++...+..++||||+++|+|.++ +.. .....+++..++.++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 433 123558999999999999999999999 8 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCC-CCCc-chhhHHHHHHHHHHHhCCCCCCCCccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSE-RTDVFGYGIMLLELVTGQRAIDFSRLEEE 497 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~Gv~l~elltg~~p~~~~~~~~~ 497 (609)
+++.++.+||+|||.+...... ......||+.|+|||.+.+. .++. ++||||||+++|||+||+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--
Confidence 9999999999999999876433 33455789999999999877 6666 999999999999999999999754321
Q ss_pred cchhHHHHHHHHhhhccchhhccc--cc-------cCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 498 DDVLLLDHVKKLEREKRLDAIVDR--NL-------NKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~d~--~l-------~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ......... ......+. .. ........+..+.+++.+||+.||++|||+.|+++
T Consensus 259 --~---~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 --V---ELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --H---HHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --H---HHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 111111111 10000000 00 00001334568899999999999999999999986
No 209
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-38 Score=345.89 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=198.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|...+.||+|+||+||+|+.. ++..||||++.... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999975 68999999997533 2334678899999999999999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccccccee
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFGLAKL 437 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfGla~~ 437 (609)
||+++|+|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999887643 388999999999999999999999 9999999999999976 45599999999987
Q ss_pred eccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh
Q 007286 438 VDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA 517 (609)
Q Consensus 438 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (609)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... +...........
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~-- 255 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYT-- 255 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCC--
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCC--
Confidence 65432 233457999999999986 57999999999999999999999999743321 111111111100
Q ss_pred hccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 IVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...+. ....+..+.+++.+||+.+|++|||+.|+++
T Consensus 256 ~~~~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 256 FDSPE-----WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCSGG-----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchh-----cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 00000 1123457889999999999999999999985
No 210
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7.1e-39 Score=320.90 Aligned_cols=248 Identities=23% Similarity=0.365 Sum_probs=196.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467889999999999999999986 79999999986421 233456889999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.+++.... .+++..+..++.|++.||.|||++ +|+|+||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999997643 378899999999999999999999 99999999999999999999999999998664
Q ss_pred cCCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhh
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAI 518 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (609)
... ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||...... ........ ...
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~-~~~--- 228 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--------TLFKKIRG-GVF--- 228 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHH-CCC---
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------HHHHHhhc-Ccc---
Confidence 322 2234468999999999987765 68999999999999999999999643211 11111111 100
Q ss_pred ccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 519 VDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 519 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..+...+..+.+++.+|++.||++|||+.|+++
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 011122357889999999999999999999987
No 211
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.2e-39 Score=348.43 Aligned_cols=252 Identities=25% Similarity=0.323 Sum_probs=205.2
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLL 358 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 358 (609)
..++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|+.++++++||||+++++++......++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467889999999999999999976 78999999986432 23456789999999999999999999999999999999
Q ss_pred EeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe---CCCCcEEEcccccc
Q 007286 359 VYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL---DEDFEAVVGDFGLA 435 (609)
Q Consensus 359 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DfGla 435 (609)
|+||+++|+|.+.+... ..+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 99999999999988753 3489999999999999999999999 99999999999999 56789999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|+||+.||...... +...........
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~ 245 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYT 245 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCC
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCC
Confidence 8765332 2334569999999999865 7999999999999999999999999753221 111111111100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. .......+..+.+++.+|++.+|++|||+.|+++
T Consensus 246 ~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FE-------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CC-------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 0001123467899999999999999999999985
No 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=335.73 Aligned_cols=261 Identities=24% Similarity=0.343 Sum_probs=200.1
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeC--
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTT-- 352 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-- 352 (609)
.++....++|...+.||+|+||.||+|.+. +|+.||||++... ......+.+|+.++.++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--cccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 344456788999999999999999999974 7899999998643 23457889999999998 79999999999865
Q ss_pred ----CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007286 353 ----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 353 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 428 (609)
....++||||+++|+|.+++.... ...++...+..++.|++.||.|||+. +|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence 457899999999999999998642 23488889999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCCcceeecccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007286 429 VGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 429 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 503 (609)
|+|||++....... .......||+.|+|||.+. +..++.++|||||||++|||+||+.||......
T Consensus 170 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------- 240 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------- 240 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--------
T ss_pred EeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--------
Confidence 99999998664322 1223456899999999986 567899999999999999999999998643211
Q ss_pred HHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH--HHhc
Q 007286 504 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR--MLEG 562 (609)
Q Consensus 504 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~--~L~~ 562 (609)
........... +.. .....+..+.+++.+||+.||++||++.++++ .+++
T Consensus 241 ~~~~~~~~~~~------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 241 RALFLIPRNPA------PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp HHHHHHHHSCC------CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred HHHHHhhcCcc------ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 11111111100 000 11122357899999999999999999999986 4444
No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.8e-39 Score=324.09 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=200.5
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEEee
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYP 361 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 361 (609)
++|+..+.||+|+||.||+|... +|+.||||+++... .......+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999976 68999999986432 22334778899999999999999999999999999999999
Q ss_pred cccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccC
Q 007286 362 FMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVR 441 (609)
Q Consensus 362 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~ 441 (609)
|++ ++|.+++..... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 998 699998876432 3378889999999999999999999 9999999999999999999999999999866432
Q ss_pred CcceeecccccccccCcccccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc--hh-
Q 007286 442 KTNVTTQVRGTMGHIAPEYLSTGK-SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL--DA- 517 (609)
Q Consensus 442 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 517 (609)
. .......||+.|+|||.+.+.. ++.++||||||+++|||+||+.||...... ................ ..
T Consensus 157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 V-RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp S-BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCCCCTTTSTTG
T ss_pred c-cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHHHHhCCCchhhhhHh
Confidence 2 1223346899999999998765 799999999999999999999999753321 1111111111100000 00
Q ss_pred ----hccccccC----CC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 518 ----IVDRNLNK----NY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 518 ----~~d~~l~~----~~---~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...+.... .+ ....+..+.+++.+|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00 1123467899999999999999999999986
No 214
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-38 Score=330.72 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=199.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC-----Ccc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP-----TER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 356 (609)
.++|...+.||+|+||.||+|.+. +|+.||||++...........+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468899999999999999999975 68999999997544444567788999999999999999999988654 668
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++|+||++ |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 5898888752 388999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcc---------eeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHH
Q 007286 437 LVDVRKTN---------VTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHV 506 (609)
Q Consensus 437 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~ 506 (609)
........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~ 236 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH----QLLLIF 236 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH----HHHHHH
Confidence 76532211 1223468999999998764 678999999999999999999999997543211 000000
Q ss_pred HHHhhhc---c--------chhhcccc--ccC----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 507 KKLEREK---R--------LDAIVDRN--LNK----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 507 ~~~~~~~---~--------~~~~~d~~--l~~----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
....... . ..+..... ... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 0 00000000 000 001123467889999999999999999999986
No 215
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4e-39 Score=361.11 Aligned_cols=246 Identities=22% Similarity=0.275 Sum_probs=202.2
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC--CCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcc
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE--SPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTER 356 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 356 (609)
...++|...+.||+|+||.||+|++. +++.||||+++... .....+.+..|..++..+ +||||+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34568999999999999999999975 58899999987421 233456788899999887 699999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||+++|+|..+++... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceee
Confidence 99999999999999998643 389999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... +......
T Consensus 491 ~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~------ 555 (674)
T 3pfq_A 491 ENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQSIM------ 555 (674)
T ss_dssp ECCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH------
T ss_pred ccccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--------HHHHHHH------
Confidence 643222 2344567999999999999999999999999999999999999999753221 1111111
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAM 553 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~ 553 (609)
...+ .++...+.++.+|+.+||+.||++||++
T Consensus 556 ---~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 556 ---EHNV--AYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ---SSCC--CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ---hCCC--CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 1111 1222345678999999999999999997
No 216
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-39 Score=341.88 Aligned_cols=262 Identities=21% Similarity=0.287 Sum_probs=194.6
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc------c
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE------R 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~ 356 (609)
..+|...+.||+|+||+||+|++.++..||+|++...... ..+|+++++.++||||+++++++..... .
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3568889999999999999999987778999988643221 2369999999999999999999854332 6
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCcEEEcccccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFEAVVGDFGLA 435 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DfGla 435 (609)
++||||++++.+..... .......+++..++.++.|+++||+|||++ +|+||||||+|||++ .++.+||+|||++
T Consensus 114 ~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEECCSEEHHHHHHH-HHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeeccCccHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 79999999865544332 222234588999999999999999999999 999999999999999 7999999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc-
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK- 513 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 513 (609)
+....... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||....... .+.........+.
T Consensus 190 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~----~l~~i~~~~g~p~~ 263 (394)
T 4e7w_A 190 KILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID----QLVEIIKVLGTPSR 263 (394)
T ss_dssp EECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHHHCCCCH
T ss_pred ccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCCH
Confidence 87643322 3345689999999998765 58999999999999999999999997543211 1111111110000
Q ss_pred -cch----hhcccc--------ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 514 -RLD----AIVDRN--------LNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 514 -~~~----~~~d~~--------l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.+. ...... +...+....+.++.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000 000000 0001112244689999999999999999999999863
No 217
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.4e-39 Score=343.01 Aligned_cols=260 Identities=24% Similarity=0.293 Sum_probs=193.5
Q ss_pred cCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCC----C--cc
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP----T--ER 356 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~ 356 (609)
.+|...+.||+|+||.||+|++. +|+.||||++.... ..+.+|+++++.++|||||++++++... + ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 45788899999999999999985 68999999986432 1234799999999999999999988432 1 25
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-CcEEEcccccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-FEAVVGDFGLA 435 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DfGla 435 (609)
++||||+++ ++...+.........+++..++.++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 689999986 56565554333345589999999999999999999999 99999999999999965 67899999999
Q ss_pred eeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh--
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE-- 512 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 512 (609)
+.+.... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... ..+...+.....+
T Consensus 205 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~----~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 205 KQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV----DQLVEIIKVLGTPTR 278 (420)
T ss_dssp EECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCSCCH
T ss_pred hhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCH
Confidence 8764332 22345789999999998764 7899999999999999999999999753321 1111222111100
Q ss_pred ccc-------hhhccccccC-----CCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 KRL-------DAIVDRNLNK-----NYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 ~~~-------~~~~d~~l~~-----~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..+ .+...+.+.. .+....+.++.+|+.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000 0000000000 011233468899999999999999999999985
No 218
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=333.51 Aligned_cols=262 Identities=25% Similarity=0.431 Sum_probs=202.7
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 355 (609)
++++...++|...+.||+|+||.||+|.+.+ .||+|+++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3444556789999999999999999999853 59999986432 23344667889999999999999999999999999
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++|+||+++++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||++
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred eEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCc
Confidence 99999999999999999753 23488999999999999999999999 999999999999998 679999999998
Q ss_pred eeeccCC----cceeecccccccccCcccccC---------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhH
Q 007286 436 KLVDVRK----TNVTTQVRGTMGHIAPEYLST---------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLL 502 (609)
Q Consensus 436 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~ 502 (609)
+...... ........||+.|+|||.+.+ ..++.++||||||+++|||+||+.||......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------- 249 (319)
T 2y4i_B 177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------- 249 (319)
T ss_dssp C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-------
T ss_pred cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------
Confidence 7653211 112233458999999999864 45789999999999999999999999643321
Q ss_pred HHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 503 LDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 503 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
.......... .+... ....+..+.+++.+||+.+|++|||+.++++.|+...
T Consensus 250 -~~~~~~~~~~------~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 250 -AIIWQMGTGM------KPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp -HHHHHHHTTC------CCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred -HHHHHhccCC------CCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 1111111111 11110 1112346889999999999999999999999999864
No 219
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.4e-39 Score=327.52 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=197.7
Q ss_pred HHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhcc--CCCcceeeeEeeCCCcc
Q 007286 280 QLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTPTER 356 (609)
Q Consensus 280 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~ 356 (609)
....++|.+.+.||+|+||.||++...+|+.||||++.... .....+.+.+|++++.+++ ||||+++++++...+..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 34567899999999999999999999889999999986432 2334578899999999997 59999999999999999
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||| +.+++|.+++.... .+++..+..++.|+++||.|||++ +|+||||||+||++++ +.+||+|||+++
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~ 174 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIAN 174 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSC
T ss_pred EEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccc
Confidence 99999 67889999998632 478899999999999999999999 9999999999999965 799999999998
Q ss_pred eeccCCcc-eeecccccccccCcccccC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007286 437 LVDVRKTN-VTTQVRGTMGHIAPEYLST-----------GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 504 (609)
Q Consensus 437 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 504 (609)
........ ......||+.|+|||.+.+ ..++.++||||||+++|||+||+.||...... . .
T Consensus 175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------~-~ 247 (313)
T 3cek_A 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ------I-S 247 (313)
T ss_dssp C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH------H-H
T ss_pred cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH------H-H
Confidence 76543222 2234568999999999865 47889999999999999999999999643211 0 1
Q ss_pred HHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 505 HVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 505 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
... ...++.....+....+..+.+++.+||+.||++||++.|+++
T Consensus 248 ~~~---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 248 KLH---------AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHH---------HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHH---------HHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111 111111111122222457899999999999999999999986
No 220
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.1e-39 Score=329.68 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=196.3
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC-------CchHHHHHHHHHHHHhccCCCcceeeeEeeCC
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES-------PGGDAAFQREVEMISVAVHRNLLRLIGFCTTP 353 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 353 (609)
..++|.+.+.||+|+||.||+|.+. +++.||||.+..... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999975 588999999864321 12234588999999999999999999998765
Q ss_pred CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEc
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVG 430 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 430 (609)
. .++||||+++++|.+++... ..+++.....++.|++.||.|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 89999999999999988652 3488999999999999999999999 9999999999999987654 9999
Q ss_pred ccccceeeccCCcceeecccccccccCccccc---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHH
Q 007286 431 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVK 507 (609)
Q Consensus 431 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 507 (609)
|||+++..... .......||+.|+|||.+. ...++.++|||||||++|||+||+.||........ +...+.
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~ 233 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----LKDQIT 233 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC----HHHHHH
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH----HHHHHH
Confidence 99999876432 2223456899999999974 56789999999999999999999999974332211 111111
Q ss_pred HHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 508 KLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 508 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. +... ..+... ...+..+.+++.+||+.||++||++.++++
T Consensus 234 ~----~~~~--~~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 S----GKYN--FIPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H----TCCC--CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h----Cccc--cCchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 0000 000000 112367899999999999999999999985
No 221
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-38 Score=332.26 Aligned_cols=270 Identities=20% Similarity=0.228 Sum_probs=191.3
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 355 (609)
.+.....++|.+.+.||+|+||+||+|.+. +|+.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345566789999999999999999999975 68999999986432 233456788888999999999999999865333
Q ss_pred -------ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCcEEeCC-CC
Q 007286 356 -------RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH--EHCNPKIIHRDVKAANVLLDE-DF 425 (609)
Q Consensus 356 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~~ 425 (609)
.++||||++++ |...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 68999999874 44444433333455888999999999999999999 87 9999999999999997 89
Q ss_pred cEEEcccccceeeccCCcceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHH
Q 007286 426 EAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLD 504 (609)
Q Consensus 426 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~ 504 (609)
.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||....... .+..
T Consensus 170 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~----~~~~ 243 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG----QLHE 243 (360)
T ss_dssp EEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHH
T ss_pred cEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH----HHHH
Confidence 99999999998765432 23345689999999998665 48999999999999999999999997543211 1111
Q ss_pred HHHHHhhh-----------ccchhhcc------ccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 505 HVKKLERE-----------KRLDAIVD------RNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 505 ~~~~~~~~-----------~~~~~~~d------~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........ .......+ ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11110000 00000000 00011112224678999999999999999999999985
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=319.58 Aligned_cols=252 Identities=18% Similarity=0.286 Sum_probs=198.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC---CCchHHHHHHHHHHHHhccCCCcceeeeEee--CCCcc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE---SPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTER 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 356 (609)
.++|.+.+.||+|+||.||++... +++.||+|+++... .......+.+|++++++++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 68999999986421 2345678999999999999999999999984 44578
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
++||||++++ +.+.+.... ...+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999987 666665532 23589999999999999999999999 99999999999999999999999999998
Q ss_pred eeccCC-cceeecccccccccCcccccCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 437 LVDVRK-TNVTTQVRGTMGHIAPEYLSTGK--SSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 437 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
...... ........||+.|+|||.+.+.. ++.++||||||+++|||+||+.||..... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i~~~- 228 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--------YKLFENIGKG- 228 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHC-
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--------HHHHHHHhcC-
Confidence 765322 22233456899999999997644 37899999999999999999999974321 1111111111
Q ss_pred cchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 514 RLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.. ......+..+.+++.+|++.||++|||+.|+++.
T Consensus 229 ~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 229 SY----------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CC----------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CC----------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 1112234578899999999999999999999963
No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-39 Score=331.20 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=201.1
Q ss_pred HhcCCCccCcccccCCceEEEEEe--CCCcEEEEEEeccCC-CCchHHHHHHHHHHHHhc---cCCCcceeeeEee----
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVL--ADGTKVAVKRLTDFE-SPGGDAAFQREVEMISVA---VHRNLLRLIGFCT---- 351 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 351 (609)
..++|...+.||+|+||.||+|.+ .+|+.||||+++... .......+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 368899999986432 222234567788877766 8999999999986
Q ss_pred -CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEc
Q 007286 352 -TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVG 430 (609)
Q Consensus 352 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 430 (609)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 699999876432 3488999999999999999999999 99999999999999999999999
Q ss_pred ccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHh
Q 007286 431 DFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLE 510 (609)
Q Consensus 431 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 510 (609)
|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... ..........
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~i~~~~~ 236 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD----QLGKILDVIG 236 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHC
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHHHcC
Confidence 999998664322 2334568999999999999999999999999999999999999997543211 1111111110
Q ss_pred hh--ccc-hh------hccc---cccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 511 RE--KRL-DA------IVDR---NLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 511 ~~--~~~-~~------~~d~---~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. ... .. .... ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000 00 0000 0000112234467889999999999999999999985
No 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=338.05 Aligned_cols=268 Identities=19% Similarity=0.265 Sum_probs=182.2
Q ss_pred cCCCc-cCcccccCCceEEEEEeC---CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee--CCCcce
Q 007286 284 DNFSE-KNVLGQGGFGKVYRGVLA---DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT--TPTERL 357 (609)
Q Consensus 284 ~~~~~-~~~LG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~ 357 (609)
+.|.. +++||+|+||+||+|++. +++.||||++.... ....+.+|+.++++++||||+++++++. .....+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34554 568999999999999975 57899999996432 3457889999999999999999999994 466789
Q ss_pred EEeecccCchhhhhhhhcC-----CCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe----CCCCcEE
Q 007286 358 LVYPFMQNLSVAYRLREIK-----PGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL----DEDFEAV 428 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~k 428 (609)
+||||+++ +|.+.+.... .....+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999975 6777665321 1123489999999999999999999999 99999999999999 7788999
Q ss_pred EcccccceeeccCCc--ceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCccccc-----cch
Q 007286 429 VGDFGLAKLVDVRKT--NVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRLEEE-----DDV 500 (609)
Q Consensus 429 l~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~-----~~~ 500 (609)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987653221 223446789999999999874 589999999999999999999999975432110 001
Q ss_pred hHHHHHHHHhhhc--cchhh------------ccccccCCCC---------HHHHHHHHHHHHhccCCCCCCCCCHHHHH
Q 007286 501 LLLDHVKKLEREK--RLDAI------------VDRNLNKNYN---------IQEVETMIQVALLCTQASPEDRPAMSEVV 557 (609)
Q Consensus 501 ~~~~~~~~~~~~~--~~~~~------------~d~~l~~~~~---------~~~~~~l~~l~~~Cl~~~P~~RPs~~evl 557 (609)
.+.........+. ....+ .......... ......+.+|+.+||+.||++|||+.|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1111111110000 00000 0000000000 00135788999999999999999999998
Q ss_pred H
Q 007286 558 R 558 (609)
Q Consensus 558 ~ 558 (609)
+
T Consensus 333 ~ 333 (405)
T 3rgf_A 333 Q 333 (405)
T ss_dssp T
T ss_pred c
Confidence 6
No 225
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1e-38 Score=340.07 Aligned_cols=198 Identities=20% Similarity=0.252 Sum_probs=171.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhc------cCCCcceeeeEeeCCCc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVA------VHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~ 355 (609)
..+|++.+.||+|+||+||+|.+. +++.||||+++.. ......+.+|++++..+ .|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457889999999999999999975 5899999999642 23356788899988877 46799999999999999
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc--EEEcccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE--AVVGDFG 433 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DfG 433 (609)
.++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999997 588888876432 3389999999999999999999999 9999999999999999887 9999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 492 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 492 (609)
+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99765422 23457899999999999999999999999999999999999999754
No 226
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.5e-38 Score=322.25 Aligned_cols=253 Identities=21% Similarity=0.275 Sum_probs=203.5
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC--------chHHHHHHHHHHHHhcc-CCCcceeeeEee
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP--------GGDAAFQREVEMISVAV-HRNLLRLIGFCT 351 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~ 351 (609)
..++|...+.||+|+||.||+|.+. +|+.||||++...... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999999975 6899999998643211 12356789999999996 999999999999
Q ss_pred CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcc
Q 007286 352 TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD 431 (609)
Q Consensus 352 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 431 (609)
.....++||||+++++|.+++... ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 999999999999999999999763 2388999999999999999999999 999999999999999999999999
Q ss_pred cccceeeccCCcceeecccccccccCccccc------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 432 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS------TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 432 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
||++....... ......||+.|+|||.+. ...++.++||||||+++|||++|+.||...... ..
T Consensus 168 fg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~ 237 (298)
T 1phk_A 168 FGFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LM 237 (298)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HH
T ss_pred ccchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--------HH
Confidence 99998765332 233456899999999885 456899999999999999999999998643211 11
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........ .. .........+..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~-~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGN-YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTC-CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCC-cc------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 11111110 00 000111233467899999999999999999999985
No 227
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.4e-38 Score=331.15 Aligned_cols=260 Identities=19% Similarity=0.239 Sum_probs=191.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCC------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPT------ 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 354 (609)
.++|...+.||+|+||.||+|... +|+.||||++.... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367888999999999999999975 68999999997532 2334567889999999999999999999997654
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999985 67777752 278889999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHH------
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKK------ 508 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~------ 508 (609)
++..... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ .......
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ----WNKVIEQLGTPCP 247 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHC-CCCCCH
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHHhCCCCH
Confidence 9865432 223345789999999999999999999999999999999999999975432110 0000000
Q ss_pred ------------H-hhhc-----cchhhccccccCCC---CHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 509 ------------L-EREK-----RLDAIVDRNLNKNY---NIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 509 ------------~-~~~~-----~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. .... ...........+.. ....+..+.+++.+|++.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000 00000000000000 1233678999999999999999999999986
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-38 Score=332.88 Aligned_cols=259 Identities=22% Similarity=0.287 Sum_probs=182.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCC------C
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTP------T 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 354 (609)
.++|...+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 467889999999999999999964 68999999986432 233456788999999999999999999998654 5
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 578999998 6899888864 2489999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... ....+.......
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~l~~i~~~~g~p 249 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-----QLKLILRLVGTP 249 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHHHHHHCSC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHHHhCCC
Confidence 9865432 334578999999999877 678999999999999999999999997543211 111111100000
Q ss_pred ---cch--------hhccccc-cCCCC-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 514 ---RLD--------AIVDRNL-NKNYN-----IQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 514 ---~~~--------~~~d~~l-~~~~~-----~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
... ..+.... ..... ......+.+|+.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 0000000 00000 1123578999999999999999999999863
No 229
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.6e-38 Score=337.63 Aligned_cols=253 Identities=22% Similarity=0.278 Sum_probs=188.5
Q ss_pred cCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEEeec
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVYPF 362 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 362 (609)
+.|...+.||+|+||+||.+...+|+.||||++.. ...+.+.+|++++.++ +|||||++++++.+.+..++||||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH----HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34555688999999999877667899999999864 2345678999999876 899999999999999999999999
Q ss_pred ccCchhhhhhhhcCCCCCC---ccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC-------------Cc
Q 007286 363 MQNLSVAYRLREIKPGEPV---LDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED-------------FE 426 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~ 426 (609)
++ |+|.+++......... .++..++.++.||+.||+|||++ +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 6999999764332211 23345678999999999999999 99999999999999654 58
Q ss_pred EEEcccccceeeccCCcc---eeecccccccccCcccccC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCccc
Q 007286 427 AVVGDFGLAKLVDVRKTN---VTTQVRGTMGHIAPEYLST-------GKSSERTDVFGYGIMLLELVT-GQRAIDFSRLE 495 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~ 495 (609)
+||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||......
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999987543322 1234579999999999965 678999999999999999999 99998643211
Q ss_pred cccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 496 EEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. .... ...... +..........+.++.+++.+||+.||++|||+.+|++
T Consensus 247 ~------~~i~---~~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 E------SNII---RGIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H------HHHH---HTCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H------HHHh---cCCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0 0000 000000 11111224566788999999999999999999999985
No 230
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.4e-38 Score=329.19 Aligned_cols=258 Identities=21% Similarity=0.294 Sum_probs=194.8
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcc----
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTER---- 356 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~---- 356 (609)
.++|...+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467888999999999999999975 68999999997533 223357788999999999999999999999877654
Q ss_pred --eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 357 --LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 357 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
++||||++ ++|...+.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 577776632 288999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 512 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 512 (609)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+..........
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~ 262 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPG 262 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH----HHHHHHHHHCCCC
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHHHhCCCc
Confidence 9865432 234568999999999877 688999999999999999999999997533211 011111100000
Q ss_pred -ccc--------hhh---ccccccCC---CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 -KRL--------DAI---VDRNLNKN---YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 -~~~--------~~~---~d~~l~~~---~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
... ... +....... .....+..+.+++.+|++.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000 000 00000000 01123468899999999999999999999985
No 231
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.8e-39 Score=328.98 Aligned_cols=258 Identities=22% Similarity=0.311 Sum_probs=180.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHH-HHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVE-MISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|...+.||+|+||.||+|... +|+.||||+++..........+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467888999999999999999985 689999999976544444556666776 677789999999999999999999999
Q ss_pred ecccCchhhhhhhhc-CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 361 PFMQNLSVAYRLREI-KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 361 e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
||+++ +|.+++... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 777766532 112345889999999999999999999852 79999999999999999999999999998664
Q ss_pred cCCcceeecccccccccCcccc----cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYL----STGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
... ......||+.|+|||.+ .+..++.++||||||+++|||+||+.||........ . . ...
T Consensus 178 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~---~---~~~ 242 (327)
T 3aln_A 178 DSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-------Q---L---TQV 242 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------------CCC
T ss_pred ccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-------H---H---HHH
Confidence 322 22234689999999998 456789999999999999999999999964221100 0 0 000
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.....+.+........+..+.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 243 VKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000011111111223467899999999999999999999985
No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.3e-38 Score=322.75 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=202.6
Q ss_pred hcCCCccCcccccCCceEEEEEe-C-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCC------cceeeeEeeCCC
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-A-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN------LLRLIGFCTTPT 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 354 (609)
.++|.+.+.||+|+||+||+|.+ . +|+.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 46889999999999999999997 3 6889999999642 234577889999999988765 999999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----------
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE----------- 423 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~----------- 423 (609)
..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 889999987632 23488999999999999999999999 9999999999999987
Q ss_pred --------CCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc
Q 007286 424 --------DFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 495 (609)
Q Consensus 424 --------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~ 495 (609)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 668999999999865432 23456899999999999999999999999999999999999999754321
Q ss_pred cccchhHHHHHHHHhhhcc--------c---------------------hhhcccc-ccCCCCHHHHHHHHHHHHhccCC
Q 007286 496 EEDDVLLLDHVKKLEREKR--------L---------------------DAIVDRN-LNKNYNIQEVETMIQVALLCTQA 545 (609)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~--------~---------------------~~~~d~~-l~~~~~~~~~~~l~~l~~~Cl~~ 545 (609)
. ............. . .....+. -........+..+.+++.+||+.
T Consensus 241 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 315 (339)
T 1z57_A 241 E-----HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315 (339)
T ss_dssp H-----HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence 1 1111111100000 0 0000000 00112345567899999999999
Q ss_pred CCCCCCCHHHHHH
Q 007286 546 SPEDRPAMSEVVR 558 (609)
Q Consensus 546 ~P~~RPs~~evl~ 558 (609)
||++|||+.|+++
T Consensus 316 dP~~Rpt~~ell~ 328 (339)
T 1z57_A 316 DPAKRITLREALK 328 (339)
T ss_dssp STTTSCCHHHHTT
T ss_pred CcccccCHHHHhc
Confidence 9999999999985
No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.4e-38 Score=328.62 Aligned_cols=265 Identities=19% Similarity=0.271 Sum_probs=199.5
Q ss_pred hcCCCccCcccccCCceEEEEEe-CCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-----------CCCcceeeeEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVL-ADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-----------HRNLLRLIGFC 350 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~ 350 (609)
.++|.+.+.||+|+||+||+|.+ .+|+.||||++.. .......+.+|++++.++. ||||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 46789999999999999999997 4789999999863 2234567889999998876 89999999998
Q ss_pred eCCC----cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC----
Q 007286 351 TTPT----ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD---- 422 (609)
Q Consensus 351 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---- 422 (609)
.... ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7543 678999999 8899999986432 33889999999999999999999953 899999999999994
Q ss_pred --CCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCcccccc--
Q 007286 423 --EDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEED-- 498 (609)
Q Consensus 423 --~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~-- 498 (609)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999876432 23346899999999999999999999999999999999999999754321110
Q ss_pred chhHHHHHHHHhh--------hccchhhccc-------------------cccCCCCHHHHHHHHHHHHhccCCCCCCCC
Q 007286 499 DVLLLDHVKKLER--------EKRLDAIVDR-------------------NLNKNYNIQEVETMIQVALLCTQASPEDRP 551 (609)
Q Consensus 499 ~~~~~~~~~~~~~--------~~~~~~~~d~-------------------~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RP 551 (609)
...+......... .......++. .-...+....+..+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0111111110000 0000000000 001124567788999999999999999999
Q ss_pred CHHHHHH
Q 007286 552 AMSEVVR 558 (609)
Q Consensus 552 s~~evl~ 558 (609)
|+.|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999986
No 234
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-38 Score=322.59 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=192.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeC---------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT--------- 352 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 352 (609)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467889999999999999999975 7999999998642 3345778999999999999999999998754
Q ss_pred ----CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEE
Q 007286 353 ----PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAV 428 (609)
Q Consensus 353 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 428 (609)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 34578999999999999999863 23477888999999999999999999 999999999999999999999
Q ss_pred EcccccceeeccCC-------------cceeecccccccccCcccccCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCcc
Q 007286 429 VGDFGLAKLVDVRK-------------TNVTTQVRGTMGHIAPEYLSTG-KSSERTDVFGYGIMLLELVTGQRAIDFSRL 494 (609)
Q Consensus 429 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~ 494 (609)
|+|||+++...... ........||+.|+|||.+.+. .++.++|||||||++|||+| ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 99999998654221 1122345689999999999764 78999999999999999998 443110
Q ss_pred ccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 495 EEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........... ....+...+....+..+.+++.+||+.||++|||+.++++
T Consensus 233 ------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ------ERVNILKKLRS-------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ------HHHHHHHHHHS-------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ------hHHHHHHhccc-------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 00111111111 0111222233444567899999999999999999999986
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.4e-38 Score=315.52 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=202.4
Q ss_pred HhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
..++|.+.+.||+|+||.||+|... +++.||||++.... .......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999976 68999999986432 344567899999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCC---CcEEEcccccce
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDED---FEAVVGDFGLAK 436 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DfGla~ 436 (609)
+||+++++|.+.+.... .+++..++.++.|++.||.|||++ +++||||||+||+++.+ +.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999887643 388999999999999999999999 99999999999999754 479999999998
Q ss_pred eeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccch
Q 007286 437 LVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLD 516 (609)
Q Consensus 437 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (609)
...... ......||+.|+|||.+.+ .++.++||||||+++|+|+||+.||...... +............
T Consensus 173 ~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 241 (287)
T 2wei_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAF 241 (287)
T ss_dssp TBCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCC
T ss_pred eecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCC
Confidence 654322 1233458999999999865 5899999999999999999999998643211 1111111111000
Q ss_pred hhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 517 AIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 517 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.. + .....+..+.+++.+|++.+|++|||+.|+++
T Consensus 242 ~~--~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL--P-----QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS--G-----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc--h-----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 0 00122457899999999999999999999986
No 236
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.5e-38 Score=320.57 Aligned_cols=262 Identities=21% Similarity=0.306 Sum_probs=191.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEee----------
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCT---------- 351 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~---------- 351 (609)
.++|...+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467888999999999999999986 4899999998643 3445678899999999999999999999874
Q ss_pred ----CCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCc
Q 007286 352 ----TPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFE 426 (609)
Q Consensus 352 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 426 (609)
.....++||||++ |+|.+++.. ..++...++.++.|++.||+|||++ +|+||||||+||+++ +++.
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3356789999998 699998864 2378899999999999999999999 999999999999997 5679
Q ss_pred EEEcccccceeeccCCc--ceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007286 427 AVVGDFGLAKLVDVRKT--NVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 503 (609)
+||+|||+++....... .......+|..|+|||.+.+ ..++.++||||||+++|||+||+.||........ ..
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~----~~ 235 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ----MQ 235 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH----HH
Confidence 99999999987643221 12234467999999998865 6789999999999999999999999975432110 00
Q ss_pred HHHHHHhh---------hccchhhcccccc-CC-----CCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 504 DHVKKLER---------EKRLDAIVDRNLN-KN-----YNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 504 ~~~~~~~~---------~~~~~~~~d~~l~-~~-----~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
........ ...+......... .. .....+..+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 11000000 0000000000000 00 01123467899999999999999999999985
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.1e-37 Score=325.34 Aligned_cols=202 Identities=21% Similarity=0.237 Sum_probs=170.9
Q ss_pred HHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CC-----CcceeeeEeeCC
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HR-----NLLRLIGFCTTP 353 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~ 353 (609)
...++|.+.+.||+|+||+||+|... +++.||||+++.. ......+..|+.++..++ |+ +|+++++++...
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34678999999999999999999975 6889999999632 233567788999988885 55 499999999999
Q ss_pred CcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC--CCCcEEEcc
Q 007286 354 TERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD--EDFEAVVGD 431 (609)
Q Consensus 354 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~D 431 (609)
+..++||||+++ +|.+++..... ..+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCCC-CHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999964 99999876432 3388999999999999999999952 12899999999999994 578899999
Q ss_pred cccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 007286 432 FGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFS 492 (609)
Q Consensus 432 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~ 492 (609)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876432 23456899999999999999999999999999999999999999754
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5e-38 Score=324.19 Aligned_cols=253 Identities=21% Similarity=0.254 Sum_probs=173.5
Q ss_pred HhcCCCcc-CcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeC----CCc
Q 007286 282 ATDNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT----PTE 355 (609)
Q Consensus 282 ~~~~~~~~-~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~ 355 (609)
..++|.+. ++||+|+||+||+|.+. +|+.||||++... ..........+..+.||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 35678874 46999999999999986 6999999998642 2222223334677889999999999865 344
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDF 432 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Df 432 (609)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||++ +|+||||||+||+++. ++.+||+||
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 789999999999999998643 24589999999999999999999999 9999999999999976 455999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|+++..... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||.......... ....... .
T Consensus 176 g~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~-~ 247 (336)
T 3fhr_A 176 GFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP----GMKRRIR-L 247 (336)
T ss_dssp TTCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred ccceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh----hHHHhhh-c
Confidence 999865432 2234568999999999988889999999999999999999999996433211100 0000000 0
Q ss_pred ccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 KRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
. ............+..+.+++.+|++.||++|||+.|+++
T Consensus 248 ~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 248 G------QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred c------ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 000011111233467899999999999999999999997
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=322.23 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=195.3
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc-----
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 355 (609)
.++|...+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999975 68999999996533 22335678899999999999999999999977654
Q ss_pred -ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccc
Q 007286 356 -RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGL 434 (609)
Q Consensus 356 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGl 434 (609)
.++||||++ ++|.+.+.. .+++..+..++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 588776642 288999999999999999999999 999999999999999999999999999
Q ss_pred ceeeccCCcceeecccccccccCcccccC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh-
Q 007286 435 AKLVDVRKTNVTTQVRGTMGHIAPEYLST-GKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE- 512 (609)
Q Consensus 435 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 512 (609)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+.........+
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~----~~~~i~~~~~~~~ 244 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD----QLTQILKVTGVPG 244 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH----HHHHHHHHHCBCC
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHHhCCCC
Confidence 9865422 234568999999999877 678999999999999999999999997543211 011111100000
Q ss_pred -ccchh--------h---cccccc---CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 513 -KRLDA--------I---VDRNLN---KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 513 -~~~~~--------~---~d~~l~---~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
..... . +..... .......+..+.+++.+|++.||++|||+.++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 0 000000 1112234578899999999999999999999985
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.9e-38 Score=323.79 Aligned_cols=247 Identities=22% Similarity=0.360 Sum_probs=199.5
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-----chHHHHHHHHHHHHhcc--CCCcceeee
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVAV--HRNLLRLIG 348 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l~--H~niv~l~~ 348 (609)
.+.+...++|.+.+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++++++ |+||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344456678999999999999999999964 6899999998753221 12345678999999996 599999999
Q ss_pred EeeCCCcceEEeecccC-chhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CCCc
Q 007286 349 FCTTPTERLLVYPFMQN-LSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-EDFE 426 (609)
Q Consensus 349 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 426 (609)
++...+..++|+|++.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 99999999999999976 89999997632 388999999999999999999999 999999999999999 7899
Q ss_pred EEEcccccceeeccCCcceeecccccccccCcccccCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHH
Q 007286 427 AVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKS-SERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDH 505 (609)
Q Consensus 427 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~ 505 (609)
+||+|||+++..... ......||+.|+|||.+.+..+ +.++||||||+++|||+||+.||.....
T Consensus 189 ~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------- 254 (320)
T 3a99_A 189 LKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------- 254 (320)
T ss_dssp EEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------
T ss_pred EEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----------
Confidence 999999999876532 2234568999999999987766 7889999999999999999999863210
Q ss_pred HHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 506 VKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 506 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
.... .. . .....+..+.+++.+||+.||++|||+.|+++
T Consensus 255 ---~~~~-~~------~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 ---IIRG-QV------F----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---HHHC-CC------C----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---hhcc-cc------c----ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 0 11122357889999999999999999999986
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.1e-38 Score=318.75 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=191.6
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCC-----chHHHHHHHHHHHHhc----cCCCccee
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESP-----GGDAAFQREVEMISVA----VHRNLLRL 346 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~~E~~~l~~l----~H~niv~l 346 (609)
.+.+...++|...+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.++.++ +||||+++
T Consensus 24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~ 103 (312)
T 2iwi_A 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL 103 (312)
T ss_dssp ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence 344556788999999999999999999964 6899999999643221 1223456799999988 89999999
Q ss_pred eeEeeCCCcceEEeec-ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeC-CC
Q 007286 347 IGFCTTPTERLLVYPF-MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLD-ED 424 (609)
Q Consensus 347 ~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~ 424 (609)
++++...+..++|+|| +.+++|.+++.... .+++..++.++.|++.||.|||+. +|+||||||+||+++ .+
T Consensus 104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 176 (312)
T 2iwi_A 104 LDWFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRR 176 (312)
T ss_dssp EEEC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTT
T ss_pred EEEEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCC
Confidence 9999999999999999 78999999998643 389999999999999999999999 999999999999999 88
Q ss_pred CcEEEcccccceeeccCCcceeecccccccccCcccccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCccccccchhHH
Q 007286 425 FEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSS-ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLL 503 (609)
Q Consensus 425 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~ 503 (609)
+.+||+|||+++...... .....||..|+|||++.+..+. .++||||||+++|||+||+.||....
T Consensus 177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------- 243 (312)
T 2iwi_A 177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---------- 243 (312)
T ss_dssp TEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------
T ss_pred CeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------
Confidence 999999999998765432 2345689999999999877664 58999999999999999999986311
Q ss_pred HHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 007286 504 DHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRM 559 (609)
Q Consensus 504 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~ 559 (609)
.. .. .. ..+....+..+.+++.+||+.+|++|||+.|+++.
T Consensus 244 ~~---~~--~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 244 EI---LE--AE----------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HH---HH--TC----------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HH---hh--hc----------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00 00 01112234578899999999999999999999863
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=314.50 Aligned_cols=252 Identities=21% Similarity=0.321 Sum_probs=179.0
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHH-HHHHHHHHhccCCCcceeeeEeeCCCcceEEe
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAF-QREVEMISVAVHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~-~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.++|...+.||+|+||.||+|.+. +|+.||||++...........+ ..+..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888899999999999999985 6899999999754433333333 44445678889999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
||+ ++.+....... ...+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 45555554432 2348899999999999999999998 6 89999999999999999999999999997664
Q ss_pred cCCcceeecccccccccCccccc-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhcc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLS-----TGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKR 514 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (609)
... ......||+.|+|||.+. ...++.++||||||+++|||+||+.||...... ............
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCC
Confidence 322 223446899999999984 557899999999999999999999999642211 011111111110
Q ss_pred chhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 515 LDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 515 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
+.+.. ....+..+.+++.+||+.||++||++.++++
T Consensus 248 ------~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 ------PLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ------CCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------CCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00000 1123357889999999999999999999985
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.7e-37 Score=318.33 Aligned_cols=259 Identities=18% Similarity=0.228 Sum_probs=198.4
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CC-cEEEEEEeccCCCCchHHHHHHHHHHHHhccCCC------cceeeeEeeCCC
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DG-TKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN------LLRLIGFCTTPT 354 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 354 (609)
.++|.+.+.||+|+||+||+|... ++ +.||||+++.. ......+.+|+.+++.++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 468999999999999999999975 34 68999999642 334577889999999998776 899999999999
Q ss_pred cceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEe-------------
Q 007286 355 ERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLL------------- 421 (609)
Q Consensus 355 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll------------- 421 (609)
..++||||+. +++.+.+.... ...+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 96 ~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELLG-KNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEeccC-CChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 9999999995 55656665422 23489999999999999999999999 99999999999999
Q ss_pred ------CCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccc
Q 007286 422 ------DEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLE 495 (609)
Q Consensus 422 ------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~ 495 (609)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999864432 23456899999999999999999999999999999999999999753321
Q ss_pred cccchhHHHHHHHHhhhc---------cc--------------------hhhccc-cccCCCCHHHHHHHHHHHHhccCC
Q 007286 496 EEDDVLLLDHVKKLEREK---------RL--------------------DAIVDR-NLNKNYNIQEVETMIQVALLCTQA 545 (609)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~---------~~--------------------~~~~d~-~l~~~~~~~~~~~l~~l~~~Cl~~ 545 (609)
. ............ .. .....+ .............+.+++.+||+.
T Consensus 246 ~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 246 E-----HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp H-----HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred H-----HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 1 111111110000 00 000000 000011234566899999999999
Q ss_pred CCCCCCCHHHHHH
Q 007286 546 SPEDRPAMSEVVR 558 (609)
Q Consensus 546 ~P~~RPs~~evl~ 558 (609)
||++|||+.|+++
T Consensus 321 dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 321 DPAQRITLAEALL 333 (355)
T ss_dssp STTTSCCHHHHTT
T ss_pred ChhhCcCHHHHhc
Confidence 9999999999974
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=331.38 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=186.7
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEEe
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 360 (609)
...+|...+.||+|+||+||.....+|+.||||++.... ...+.+|+++++.+ +|||||++++++.+....++||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT----EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 445688889999999999765555679999999986422 22356899999998 7999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC-----CCcEEEcccccc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE-----DFEAVVGDFGLA 435 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DfGla 435 (609)
||++ |+|.+++..... ......+..++.||+.||.|||+. +|+||||||+|||++. ...+||+|||++
T Consensus 98 E~~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp ECCS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred ECCC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 9997 599999876432 234445678999999999999999 9999999999999953 346889999999
Q ss_pred eeeccCCc--ceeecccccccccCccccc---CCCCCcchhhHHHHHHHHHHHh-CCCCCCCCccccccchhHHHHHHHH
Q 007286 436 KLVDVRKT--NVTTQVRGTMGHIAPEYLS---TGKSSERTDVFGYGIMLLELVT-GQRAIDFSRLEEEDDVLLLDHVKKL 509 (609)
Q Consensus 436 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 509 (609)
+....... .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... .....
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---------~~~~~ 241 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---------QANIL 241 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---------HHHHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---------HHHHH
Confidence 87653321 2234467999999999997 4567889999999999999999 88888532211 01111
Q ss_pred hhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 510 EREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 510 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
...... . . ..........+.+++.+||+.||++|||+.+|++
T Consensus 242 ~~~~~~-~----~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSL-D----C--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCC-T----T--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCc-c----c--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 110000 0 0 0112344566889999999999999999999984
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.1e-38 Score=344.30 Aligned_cols=260 Identities=22% Similarity=0.256 Sum_probs=199.6
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeC------CCc
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTT------PTE 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 355 (609)
.++|.+.+.||+|+||+||+|.+. +|+.||||+++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999974 6899999998765555566789999999999999999999998755 667
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCc---EEEccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFE---AVVGDF 432 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Df 432 (609)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999986432 23488889999999999999999999 9999999999999997664 999999
Q ss_pred ccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhh
Q 007286 433 GLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLERE 512 (609)
Q Consensus 433 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 512 (609)
|+++...... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .|.......
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-------~~~~~i~~~ 239 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-------QWHGKVREK 239 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-------HSSTTCC--
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-------hhhhhhhcc
Confidence 9998765332 2334579999999999999999999999999999999999999996432110 000000000
Q ss_pred c----cchhhccc------c--ccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 007286 513 K----RLDAIVDR------N--LNKNYNIQEVETMIQVALLCTQASPEDRPAMSE 555 (609)
Q Consensus 513 ~----~~~~~~d~------~--l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~e 555 (609)
. ........ . .........+..+.+++..|++.||++|||+.+
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 0 00000000 0 011234556788999999999999999999866
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-37 Score=348.29 Aligned_cols=239 Identities=20% Similarity=0.303 Sum_probs=193.7
Q ss_pred hcCCCccCcccccCCceEEEEEeC--CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc-----
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA--DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE----- 355 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~--~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 355 (609)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 6899999998765444556788999999999999999999999977655
Q ss_pred ceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccc
Q 007286 356 RLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 435 (609)
Q Consensus 356 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla 435 (609)
.++||||+++++|.+++.. .+++..++.++.||+.||.|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999887653 489999999999999999999999 99999999999999986 8999999999
Q ss_pred eeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccc
Q 007286 436 KLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRL 515 (609)
Q Consensus 436 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (609)
+..... ....||+.|+|||++.+.. +.++|||||||++|||++|..|+........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~------------------ 284 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL------------------ 284 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc------------------
Confidence 876432 3456999999999987654 8999999999999999999988753211100
Q ss_pred hhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHHhc
Q 007286 516 DAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPA-MSEVVRMLEG 562 (609)
Q Consensus 516 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs-~~evl~~L~~ 562 (609)
. ...........+.+++.+||+.||++||+ ++++.+.|.+
T Consensus 285 ---~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 ---P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 00001123357889999999999999995 5556665554
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.6e-36 Score=302.15 Aligned_cols=230 Identities=11% Similarity=0.028 Sum_probs=182.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCcceEE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 359 (609)
.++|.+.+.||+|+||.||+|.+. +|+.||||++..... ....+.|.+|+.++.+++||||+++++++...+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999986 589999999975433 22347899999999999999999999999999999999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeec
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVD 439 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~ 439 (609)
|||+++++|.++++.. .......+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999998541 23446788999999999999999 99999999999999999999998543
Q ss_pred cCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhc
Q 007286 440 VRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIV 519 (609)
Q Consensus 440 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (609)
|++ .++.++|||||||++|||+||+.||........... .....
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~ 218 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDT 218 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCT
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHh
Confidence 333 368899999999999999999999975443211000 00000
Q ss_pred ccccc--CCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Q 007286 520 DRNLN--KNYNIQEVETMIQVALLCTQASPEDRPAMSEVVRMLEGEG 564 (609)
Q Consensus 520 d~~l~--~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~~L~~~~ 564 (609)
..... .......+..+.+++.+||+.||++| |+.|+++.|+...
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 00000 00112234678999999999999999 9999999998753
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=320.62 Aligned_cols=244 Identities=14% Similarity=0.094 Sum_probs=181.9
Q ss_pred hcCCCccCcccccCCceEEEEEeC-CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccC-CCccee---------eeE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVH-RNLLRL---------IGF 349 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H-~niv~l---------~~~ 349 (609)
+..|...++||+|+||+||+|.+. +|+.||||+++.... ....+.|.+|+.+++.+.| +|.... ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345677889999999999999964 799999999873322 2235789999999999987 322111 111
Q ss_pred e------------eC-----CCcceEEeecccCchhhhhhhhc---CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007286 350 C------------TT-----PTERLLVYPFMQNLSVAYRLREI---KPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKI 409 (609)
Q Consensus 350 ~------------~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 409 (609)
. .. ....+++|++ .+++|.++++.. ......+++..++.++.|+++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1 11 1224555554 467999888532 23345588999999999999999999999 99
Q ss_pred EecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccc----------cCCCCCcchhhHHHHHHH
Q 007286 410 IHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYL----------STGKSSERTDVFGYGIML 479 (609)
Q Consensus 410 vH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~Gv~l 479 (609)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 344567 999999999 555689999999999999
Q ss_pred HHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchhhccccccCCCCHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 480 LELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 480 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
|||+||+.||........ ...++... . ..+..+.+++.+||+.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~-----------------~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----------------SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----------------SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhh-----------------HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999975432211 11111111 1 12367899999999999999999988864
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.8e-35 Score=297.57 Aligned_cols=226 Identities=21% Similarity=0.277 Sum_probs=178.0
Q ss_pred cCCCcc-CcccccCCceEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHH-HhccCCCcceeeeEeeC----CCcc
Q 007286 284 DNFSEK-NVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMI-SVAVHRNLLRLIGFCTT----PTER 356 (609)
Q Consensus 284 ~~~~~~-~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 356 (609)
++|.+. +.||+|+||.||+|... +|+.||||++.. ...+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 78999999999999974 689999999863 34677899887 66689999999999876 5678
Q ss_pred eEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC---CCcEEEcccc
Q 007286 357 LLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE---DFEAVVGDFG 433 (609)
Q Consensus 357 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DfG 433 (609)
++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999998743 23589999999999999999999999 9999999999999998 7899999999
Q ss_pred cceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCccccccchhHHHHHHHHhhhc
Q 007286 434 LAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREK 513 (609)
Q Consensus 434 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (609)
++.... +..++.++|||||||++|||+||+.||......... ..
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~~ 209 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------PG 209 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------HH
Confidence 987543 234678999999999999999999999643221100 00
Q ss_pred cchhhccccccCCCC----HHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 007286 514 RLDAIVDRNLNKNYN----IQEVETMIQVALLCTQASPEDRPAMSEVVR 558 (609)
Q Consensus 514 ~~~~~~d~~l~~~~~----~~~~~~l~~l~~~Cl~~~P~~RPs~~evl~ 558 (609)
....+..... ... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 MKTRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCCSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000000 011 123467899999999999999999999996
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.8e-36 Score=310.20 Aligned_cols=243 Identities=15% Similarity=0.119 Sum_probs=184.1
Q ss_pred HhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCC-------CCchHHHHHHHHHHHHhcc---------CCCcce
Q 007286 282 ATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFE-------SPGGDAAFQREVEMISVAV---------HRNLLR 345 (609)
Q Consensus 282 ~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------~~~~~~~~~~E~~~l~~l~---------H~niv~ 345 (609)
..++|...+.||+|+||+||+|++ +|+.||||++.... .....+.+.+|+.+++.++ |||||+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346788899999999999999998 68999999997542 2334478999999999886 666666
Q ss_pred eeeEe-----------------eC-------------CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHH
Q 007286 346 LIGFC-----------------TT-------------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAA 395 (609)
Q Consensus 346 l~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia 395 (609)
+.+.+ .+ ....++||||+++|++.+.+.. ..+++..++.++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 66543 22 6788999999999977666643 3378999999999999
Q ss_pred HHHHHHH-hcCCCCeEecCCCCCcEEeCCCC--------------------cEEEcccccceeeccCCcceeeccccccc
Q 007286 396 RGLEYLH-EHCNPKIIHRDVKAANVLLDEDF--------------------EAVVGDFGLAKLVDVRKTNVTTQVRGTMG 454 (609)
Q Consensus 396 ~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 454 (609)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+++..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 8999999999876532 3369999
Q ss_pred ccCcccccCCCCCcchhhHHHHHH-HHHHHhCCCCCCCCccccccchhHHHHHHHHhhhccchh-hccccccCCCCHHHH
Q 007286 455 HIAPEYLSTGKSSERTDVFGYGIM-LLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDA-IVDRNLNKNYNIQEV 532 (609)
Q Consensus 455 y~aPE~~~~~~~~~~~Dv~s~Gv~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~ 532 (609)
|+|||++.+.. +.++||||+|++ .+++++|..||... .|....... .... ..............+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s 309 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV-----------LWLHYLTDK-MLKQMTFKTKCNTPAMKQIK 309 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH-----------HHHHHHHHH-HHHTCCCSSCCCSHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch-----------hhhhHHHHh-hhhhhccCcccchhhhhhcC
Confidence 99999998666 899999998777 78888899887310 111111000 0000 001111111234577
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHH
Q 007286 533 ETMIQVALLCTQASPEDRPAMSEVV 557 (609)
Q Consensus 533 ~~l~~l~~~Cl~~~P~~RPs~~evl 557 (609)
.++.+++.+|++.| |+.|++
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHHhccC-----CHHHHH
Confidence 89999999999866 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=278.00 Aligned_cols=185 Identities=14% Similarity=0.049 Sum_probs=129.6
Q ss_pred ccccCCceEEEEE-eCCCcEEEEEEeccCCC---------CchHHHHHHHHHHHHhc-cCCCcceeeeEeeCCCcceEEe
Q 007286 292 LGQGGFGKVYRGV-LADGTKVAVKRLTDFES---------PGGDAAFQREVEMISVA-VHRNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 292 LG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~---------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 360 (609)
.+.|++|.+..++ .-.|+.||||.+..... ....++|.+|+++|+++ .|+||+++++++.++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555544 23588999999864321 12345799999999999 6999999999999999999999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeecc
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDV 440 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~ 440 (609)
||++|++|.+.+....+ ++. .+|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~~~~----l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE----IDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHTTCC----CCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHhCCC----CCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999986432 443 35899999999999999 999999999999999999999999999987654
Q ss_pred CCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007286 441 RKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 488 (609)
Q Consensus 441 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p 488 (609)
.. ......+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 392 ~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 32 23445679999999999965 567789999999998887665443
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=4e-27 Score=240.02 Aligned_cols=174 Identities=29% Similarity=0.541 Sum_probs=160.0
Q ss_pred hcCchhHHHHHHHHHhCCCCCCCcCCCCCCCCCCCC--cceeEEcCC---CCeEEEEecCCCccc--ccCccccCCCCCC
Q 007286 21 ALSDYQGDALFALRTSLRVPNNQLRDWNQNQVNPCT--WSNVICDNS---NNVASVTLSSMNFSG--TLSPRIGVLRTLS 93 (609)
Q Consensus 21 ~~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~~---~~l~~L~L~~n~l~~--~~~~~~~~l~~L~ 93 (609)
.|.+.|.+||++||+++.+|. .+.+|+. +.+||. |.||+|+.. ++|+.|+|++|+++| .+|..|.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 367789999999999998886 7889976 458998 999999864 699999999999999 9999999999999
Q ss_pred EEEccC-CCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCC
Q 007286 94 TLTLKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSN 172 (609)
Q Consensus 94 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 172 (609)
+|+|++ |.+.+.+|..|+++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..+..+++|++|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccc----cCCcccCCCCCCC
Q 007286 173 NLSGQIPVHLF----QIPKYNFTGNNLN 196 (609)
Q Consensus 173 ~l~~~ip~~l~----~l~~l~~~~n~~~ 196 (609)
+++|.+|..+. +++.|++++|...
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~ 187 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLT 187 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeee
Confidence 99999998775 4556888888653
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=6.2e-27 Score=255.43 Aligned_cols=187 Identities=14% Similarity=0.188 Sum_probs=146.6
Q ss_pred CCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCc-------hHHHHHHHHHHHHhccCCCcceeeeEeeCCCcce
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPG-------GDAAFQREVEMISVAVHRNLLRLIGFCTTPTERL 357 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 357 (609)
.+...+.||+|+||+||+|.. .++.+|+|+........ ..+.|.+|++++++++||||+++..++...+..+
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp -----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred cCCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence 334567999999999999965 57889999875422111 1345899999999999999997766776778889
Q ss_pred EEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 358 LVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 358 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.
T Consensus 416 lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp EEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred EEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 99999999999999875 457899999999999999 9999999999999999 999999999998
Q ss_pred eccCCcce------eecccccccccCcccccC--CCCCcchhhHHHHHHHHHHHhCCCCC
Q 007286 438 VDVRKTNV------TTQVRGTMGHIAPEYLST--GKSSERTDVFGYGIMLLELVTGQRAI 489 (609)
Q Consensus 438 ~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~elltg~~p~ 489 (609)
........ .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.++
T Consensus 479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 75432211 235679999999999976 56788899999999988888877665
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=3.3e-24 Score=245.03 Aligned_cols=176 Identities=26% Similarity=0.350 Sum_probs=117.6
Q ss_pred HhhhhcCchhHHHHHHHHHhCCCCCCCcCCCCCCCCCCCCcceeEEcCCCCeEEEEecCCCcccc---cCc---------
Q 007286 17 LHYLALSDYQGDALFALRTSLRVPNNQLRDWNQNQVNPCTWSNVICDNSNNVASVTLSSMNFSGT---LSP--------- 84 (609)
Q Consensus 17 ~~~~~~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~l~~L~L~~n~l~~~---~~~--------- 84 (609)
++++++.+.|++||++||+++.||. .+++|+. +.+||.|.||+|+ .++|+.|+|+++++.|. +|+
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 3344456779999999999999998 8999974 4699999999999 68999999999999987 554
Q ss_pred --------------cccCCCCCCEEEccCCCcCCCCCc--cccccccccccccccccccccCCccc-cCcccchhhhccC
Q 007286 85 --------------RIGVLRTLSTLTLKGNGITGEIPE--ELGNLSSLTSLDLDNNRLVGKIPPSL-GNLKKLQFLTLSQ 147 (609)
Q Consensus 85 --------------~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~l~~ 147 (609)
.|+.+++|++|+|++|.++|.+|. .+++|++|++|+|++|++++.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 555566666666666666666666 66666666666666666666666554 5566666666666
Q ss_pred CcCCCCcCCC---cCcccccccccCCCCcccccCC-cccccCCcccCCCCCC
Q 007286 148 NNFSGTIPDS---LTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNL 195 (609)
Q Consensus 148 N~l~~~~p~~---~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~ 195 (609)
|++++..|.. +.++++|++|++++|.+++.+| ..+.+|+.|++++|..
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l 212 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNF 212 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCC
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcC
Confidence 6665554443 4445555555555555554444 2334455555555544
No 255
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.9e-24 Score=246.58 Aligned_cols=172 Identities=24% Similarity=0.295 Sum_probs=153.6
Q ss_pred hhcCchhHHHHHHHHHhCCCCCCCcCCCCCCC----CCC--CCc------------ceeEEcCCCCeEEEEecCCCcccc
Q 007286 20 LALSDYQGDALFALRTSLRVPNNQLRDWNQNQ----VNP--CTW------------SNVICDNSNNVASVTLSSMNFSGT 81 (609)
Q Consensus 20 ~~~~~~~~~~l~~~k~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~L~L~~n~l~~~ 81 (609)
++....|.+||++||+++.+| +|+.++ .+| |+| .||+|+..++|+.|+|++|++.|.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 344567899999999999887 786654 456 999 999999888999999999999999
Q ss_pred cCccccCCCCCCEEEc-cCCCcCCC-------------------------------------------------------
Q 007286 82 LSPRIGVLRTLSTLTL-KGNGITGE------------------------------------------------------- 105 (609)
Q Consensus 82 ~~~~~~~l~~L~~L~L-~~N~l~~~------------------------------------------------------- 105 (609)
+|+.|++|++|+.|+| ++|.++|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 77766554
Q ss_pred ---------------------CCccccccccccccccccccccc-----------------cCCcccc--Ccccchhhhc
Q 007286 106 ---------------------IPEELGNLSSLTSLDLDNNRLVG-----------------KIPPSLG--NLKKLQFLTL 145 (609)
Q Consensus 106 ---------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~l 145 (609)
+|..|++|++|++|+|++|+|+| .+|..++ +|++|+.|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 88899999999999999999998 4999988 9999999999
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCc-ccc-cCCcccc----------cCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNN-LSG-QIPVHLF----------QIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~ip~~l~----------~l~~l~~~~n~~~ 196 (609)
++|++.|.+|..|.++++|+.|+|++|+ ++| .+|..+. +|..|++++|...
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 9999999999999999999999999998 998 8886554 6778899999876
No 256
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.3e-23 Score=210.35 Aligned_cols=153 Identities=13% Similarity=0.035 Sum_probs=122.6
Q ss_pred HHHHHHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCC-----------------chHHHHHHHHHHHHhcc
Q 007286 277 RELQLATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESP-----------------GGDAAFQREVEMISVAV 339 (609)
Q Consensus 277 ~el~~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-----------------~~~~~~~~E~~~l~~l~ 339 (609)
..+......|...+.||+|+||.||+|.+.+|+.||||.++..... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3444555667788999999999999999977999999998632211 13457899999999999
Q ss_pred CCCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcE
Q 007286 340 HRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANV 419 (609)
Q Consensus 340 H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 419 (609)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 4 666665533 56799999999999988 421 12346999999999999999 999999999999
Q ss_pred EeCCCCcEEEcccccceeeccCCcceeecccccccccCccccc
Q 007286 420 LLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLS 462 (609)
Q Consensus 420 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 462 (609)
|++ ++.+||+|||+++. +..|+|||++.
T Consensus 225 Ll~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 999 99999999999973 44578899874
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=1.3e-23 Score=234.69 Aligned_cols=174 Identities=25% Similarity=0.292 Sum_probs=155.4
Q ss_pred hcCchhHHHHHHHHHhCCCCCCC--------cCCCCCCCCCCCCc---ceeEEcCCCCeEEEEecCCCcccccCccccCC
Q 007286 21 ALSDYQGDALFALRTSLRVPNNQ--------LRDWNQNQVNPCTW---SNVICDNSNNVASVTLSSMNFSGTLSPRIGVL 89 (609)
Q Consensus 21 ~~~~~~~~~l~~~k~~~~~~~~~--------l~~w~~~~~~~c~w---~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l 89 (609)
+....|.+||.+||.++.+++.. ..+|+.+ .+||.| .||+|+..++|+.|+|++|+++|.+|+.|++|
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcC
Confidence 33446888999999999876533 2369864 699999 99999888899999999999999999999999
Q ss_pred CCCCEEEccCCC--------------------------------------------------------------------
Q 007286 90 RTLSTLTLKGNG-------------------------------------------------------------------- 101 (609)
Q Consensus 90 ~~L~~L~L~~N~-------------------------------------------------------------------- 101 (609)
++|++|+|++|.
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~ 184 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCC
T ss_pred ccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchh
Confidence 999999999984
Q ss_pred ----------cCCCCCcccccccccccccccccccccc-----------------CCcccc--CcccchhhhccCCcCCC
Q 007286 102 ----------ITGEIPEELGNLSSLTSLDLDNNRLVGK-----------------IPPSLG--NLKKLQFLTLSQNNFSG 152 (609)
Q Consensus 102 ----------l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~ 152 (609)
|+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++|++.|
T Consensus 185 ~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~ 263 (636)
T 4eco_A 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLT 263 (636)
T ss_dssp TTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCS
T ss_pred hhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCc
Confidence 445 899999999999999999999986 999999 99999999999999999
Q ss_pred CcCCCcCcccccccccCCCCc-ccc-cCCccc---------ccCCcccCCCCCCC
Q 007286 153 TIPDSLTTLSSLISIQLDSNN-LSG-QIPVHL---------FQIPKYNFTGNNLN 196 (609)
Q Consensus 153 ~~p~~~~~l~~L~~L~l~~N~-l~~-~ip~~l---------~~l~~l~~~~n~~~ 196 (609)
.+|..+.++++|++|+|++|+ ++| .+|..+ .+|+.|++++|...
T Consensus 264 ~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 264 KLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp SCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred cChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999999999999999998 998 899755 56788899999876
No 258
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=2.2e-21 Score=188.11 Aligned_cols=148 Identities=22% Similarity=0.275 Sum_probs=132.4
Q ss_pred CCCCCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccc
Q 007286 52 VNPCTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDL 121 (609)
Q Consensus 52 ~~~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 121 (609)
...|+|++|.|++. .+|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|
T Consensus 16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEEC
Confidence 47899999999762 37999999999999999999999999999999999998666677899999999999
Q ss_pred ccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCC
Q 007286 122 DNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCG 198 (609)
Q Consensus 122 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~ 198 (609)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+ .+|..|++.+|++.|.
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999777777899999999999999999 899999999999999999999995544444 5677789999999998
Q ss_pred CC
Q 007286 199 KT 200 (609)
Q Consensus 199 ~~ 200 (609)
++
T Consensus 175 c~ 176 (229)
T 3e6j_A 175 CR 176 (229)
T ss_dssp BG
T ss_pred cc
Confidence 74
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=3.6e-22 Score=204.61 Aligned_cols=172 Identities=19% Similarity=0.306 Sum_probs=149.4
Q ss_pred hcCchhHHHHHHHHHhC-CCCCCCcCCCC---CCCCCCCCcceeEEcC---------CCCeEEEEecCCCcccccCcccc
Q 007286 21 ALSDYQGDALFALRTSL-RVPNNQLRDWN---QNQVNPCTWSNVICDN---------SNNVASVTLSSMNFSGTLSPRIG 87 (609)
Q Consensus 21 ~~~~~~~~~l~~~k~~~-~~~~~~l~~w~---~~~~~~c~w~gv~c~~---------~~~l~~L~L~~n~l~~~~~~~~~ 87 (609)
+....+.+||++||.++ .+|.+.+.+|. ....++|.|.|+.|.. ..+|+.|+|++|+++ .+|..++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 44567889999999998 47777788894 4456899999999952 368999999999999 8888899
Q ss_pred CCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCc-------
Q 007286 88 VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTT------- 160 (609)
Q Consensus 88 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------- 160 (609)
.+++|++|+|++|.|+ .+|..++++++|++|+|++|+|+ .+|..|+++++|+.|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999999 88999999999999999999998899988765
Q ss_pred --ccccccccCCCCcccccCCcccc---cCCcccCCCCCCC
Q 007286 161 --LSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 161 --l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~ 196 (609)
+++|++|+|++|.++ .+|..+. +|..|++++|...
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 899999999999998 7887655 5566788888765
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=7.8e-21 Score=183.06 Aligned_cols=147 Identities=22% Similarity=0.281 Sum_probs=131.7
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 124 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 124 (609)
|.|..|.|.+. .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67999999752 37999999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCCCCCC
Q 007286 125 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 125 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c~~~~ 201 (609)
+|+...+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..+. ++..|++++|++.|+|..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99965556689999999999999999988899999999999999999999976665454 567789999999998753
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=180.77 Aligned_cols=147 Identities=24% Similarity=0.290 Sum_probs=131.5
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccC-ccccCCCCCCEEEccCCCcCCCCCcccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLS-PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 123 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 123 (609)
|.|..+.|++. ..++.|+|++|+|++..+ ..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 67888998752 268899999999998865 4589999999999999999988888999999999999999
Q ss_pred ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCCCCC
Q 007286 124 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 124 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c~~~ 200 (609)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|. +|..|++++|++.|+++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999987788899999999999999999988899999999999999999999987787665 56678999999999876
Q ss_pred C
Q 007286 201 L 201 (609)
Q Consensus 201 ~ 201 (609)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.80 E-value=2.2e-20 Score=213.31 Aligned_cols=124 Identities=35% Similarity=0.630 Sum_probs=115.0
Q ss_pred ccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccc
Q 007286 86 IGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLI 165 (609)
Q Consensus 86 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 165 (609)
++.+++|+.|||++|+|+|.+|..|++|++|+.|+|++|+|+|.+|..|++|++|+.|||++|+++|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcccccCCc--ccccCCcccCCCCCCCCCCCCCCCCCCCCC
Q 007286 166 SIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNCGKTLPHSCESSSN 210 (609)
Q Consensus 166 ~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~c~~~~~~~c~~~~~ 210 (609)
+|+|++|+|+|.||. .+..++.+.+.||++.||.+++ +|.....
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~~ 753 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSNA 753 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC-
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCcc
Confidence 999999999999995 4778889999999999999887 8875443
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.80 E-value=9.3e-20 Score=173.87 Aligned_cols=147 Identities=21% Similarity=0.266 Sum_probs=128.5
Q ss_pred CCCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccc
Q 007286 54 PCTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 123 (609)
Q Consensus 54 ~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 123 (609)
.|.|.+|.|+.. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999753 3699999999999987777889999999999999999976666789999999999999
Q ss_pred ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCCCCC
Q 007286 124 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 124 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c~~~ 200 (609)
|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|++|+|++|++++..+.. +.+|..|++++|++.|.++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9999766677899999999999999999766777899999999999999999655543 4567778999999988764
No 264
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=3.8e-19 Score=175.55 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=106.9
Q ss_pred CCCccCcccccCCceEEEEEe-CCCcE--EEEEEeccCCCC-----------------------chHHHHHHHHHHHHhc
Q 007286 285 NFSEKNVLGQGGFGKVYRGVL-ADGTK--VAVKRLTDFESP-----------------------GGDAAFQREVEMISVA 338 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~~-----------------------~~~~~~~~E~~~l~~l 338 (609)
-|.+.+.||+|+||.||+|.+ .+|+. ||||+++..... .....+.+|+.++.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999998 68999 999987532111 0113678999999999
Q ss_pred cCCCc--ceeeeEeeCCCcceEEeecccC-c----hhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCeE
Q 007286 339 VHRNL--LRLIGFCTTPTERLLVYPFMQN-L----SVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLH-EHCNPKII 410 (609)
Q Consensus 339 ~H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~iv 410 (609)
.|+++ ..++++ ...++||||+.+ | +|.+.... .+......++.|++.||.||| +. +|+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 98864 334432 367899999953 4 55544332 234466789999999999999 88 999
Q ss_pred ecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 411 HRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 411 H~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999998 9999999999754
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=4.2e-19 Score=167.06 Aligned_cols=146 Identities=26% Similarity=0.376 Sum_probs=111.0
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCc-cccCCCCCCEEEccCCCcCCCCCcccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSP-RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 123 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 123 (609)
|.|+.+.|++. .+++.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888642 2788888888888866654 478888888888888888877788888888888888888
Q ss_pred ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCc-ccc-cCCcccCCCCCCCCCCC
Q 007286 124 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV-HLF-QIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 124 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~-~l~-~l~~l~~~~n~~~c~~~ 200 (609)
|+|++..|..|.++++|+.|+|++|+|++..|..+..+++|++|+|++|++++..+. .+. .+....+.++...|..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 888877777788888888888888888877788888888888888888888877662 121 12333445555555543
No 266
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=1.2e-20 Score=203.74 Aligned_cols=141 Identities=23% Similarity=0.277 Sum_probs=109.8
Q ss_pred CCcceeEEcCCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccc-ccccccccccccccccccCCcc
Q 007286 55 CTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG-NLSSLTSLDLDNNRLVGKIPPS 133 (609)
Q Consensus 55 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~ 133 (609)
|.+.++.|....+|+.|+|++|.+++..|..++.+++|+.|+|++|.|++.+|..+. ++++|+.|+|++|+|++. | .
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~ 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-G 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-C
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-c
Confidence 556777777777888888888888888888888888888888888888887777776 688888888888888855 3 2
Q ss_pred ccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCC
Q 007286 134 LGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGK 199 (609)
Q Consensus 134 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~ 199 (609)
+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.|++ +|..+ .++..|++++|++.|++
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 3458888888888888884 55557888888888888888884 67554 45566788888887754
No 267
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.74 E-value=5.7e-19 Score=179.57 Aligned_cols=136 Identities=30% Similarity=0.482 Sum_probs=104.3
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+|+.|+|++|.+++.+|..+..++ |+.|+|++|++++.+|..|.++++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 455666666666666666665555 66666666666666666777777777777777777765554 7778888888888
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCCc--ccccCCcccCCCCCCCCCCCCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNCGKTLPHSC 205 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~c~~~~~~~c 205 (609)
+|+|++.+|..+..+++|++|+|++|+++|.+|. .+.+|..+++.+|++.|+.|.+ .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 8998888999999999999999999999999995 4667788899999999998765 45
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.74 E-value=5.4e-18 Score=166.62 Aligned_cols=133 Identities=20% Similarity=0.265 Sum_probs=80.9
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 35666666666666555555666666666666666666555555666666666666666666444445566666666666
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCG 198 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~ 198 (609)
++|+|++..|..|..+++|++|+|++|+|++..|..+ .+|..|++++|++.|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 6666664444456666666666666666664444333 3445566666666664
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=5e-18 Score=166.88 Aligned_cols=130 Identities=20% Similarity=0.251 Sum_probs=115.4
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 68999999999999888899999999999999999998888889999999999999999997777889999999999999
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~ 196 (609)
+|+|++..+..|..+++|+.|+|++|+|++..|..+ .+|..|++++|...
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 999996666678899999999999999996555444 56777889999765
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=5.1e-18 Score=159.62 Aligned_cols=130 Identities=22% Similarity=0.348 Sum_probs=115.9
Q ss_pred EEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCc-cccccccccccccccccccccCCccccCcccchhhhccC
Q 007286 69 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPE-ELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 147 (609)
Q Consensus 69 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 147 (609)
+.|++++|+++ .+|..+.. +|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999997 77776643 999999999999966664 489999999999999999998899999999999999999
Q ss_pred CcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCCCCCC
Q 007286 148 NNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 148 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c~~~~ 201 (609)
|+|++..|..|..+++|++|+|++|+|++.+|..+. +|..|++++|++.|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 999988888899999999999999999988887665 566789999999998753
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.72 E-value=1.4e-17 Score=165.68 Aligned_cols=136 Identities=20% Similarity=0.206 Sum_probs=110.4
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|+++++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 35788888888888877777788888888888888888877777788888888888888888876666778888888888
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
|++|++++..|..+..+++|+.|++++|++++..|..+ .+|..|++++|++.|.++
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 88888887666677888888899999988887666443 456677888888887654
No 272
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.72 E-value=8.6e-18 Score=155.83 Aligned_cols=125 Identities=23% Similarity=0.309 Sum_probs=84.9
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 124 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 124 (609)
|.|.+|.|++. .+++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 67998888652 25677777777777655556667777777777777777555555667777777777777
Q ss_pred cccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCC
Q 007286 125 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 125 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
+|++..+..|.++++|+.|+|++|+|++..+..+..+++|++|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7775555556777777777777777774444445667777777777777776554
No 273
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=156.74 Aligned_cols=129 Identities=29% Similarity=0.381 Sum_probs=111.3
Q ss_pred EEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCC
Q 007286 69 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 148 (609)
Q Consensus 69 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 148 (609)
+.+++++|+++ .+|..+ .++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35777888888 667655 368999999999999 88899999999999999999999877888999999999999999
Q ss_pred cCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCCC
Q 007286 149 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 149 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~~ 201 (609)
+|++..|..|..+++|++|+|++|+|++..+..| .++..|++++|++.|+|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l 144 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM 144 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC
Confidence 9997777889999999999999999995444434 4677789999999998753
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.71 E-value=2.3e-17 Score=165.66 Aligned_cols=134 Identities=27% Similarity=0.288 Sum_probs=107.2
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 347788888888887 6677788888888888888888866667788888888888888888866666788888888888
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c~~~ 200 (609)
|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+. +++.+++.+|++.|.|.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc
Confidence 8888888544455678888888899888888 6776554 46667889999988764
No 275
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.70 E-value=4.4e-17 Score=161.97 Aligned_cols=135 Identities=20% Similarity=0.251 Sum_probs=92.2
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 35666777777766555556666777777777777777666666677777777777777777554555777777777777
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
++|++++..+..|..+++|++|+|++|++++..+..+ .+|..|++++|++.|++.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7777775555567777777777777777774333333 355667778888777764
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.70 E-value=3.3e-17 Score=162.87 Aligned_cols=129 Identities=21% Similarity=0.221 Sum_probs=79.2
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|+.|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45666666666665555566666666666666666664444445666666666666666665445556666666666666
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNL 195 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~ 195 (609)
+|++++..|..|..+++|++|+|++|.+++..+..+ .+|..|++++|..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 666665555556666666666666666664333222 3455556666643
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.69 E-value=3e-17 Score=183.04 Aligned_cols=158 Identities=18% Similarity=0.198 Sum_probs=124.7
Q ss_pred CCCCcCCCCCC---CCCCCCc----ceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCc
Q 007286 40 PNNQLRDWNQN---QVNPCTW----SNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGI 102 (609)
Q Consensus 40 ~~~~l~~w~~~---~~~~c~w----~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 102 (609)
+...+.+|+.+ ..+||.+ ..|.|.+. .+++.|+|++|+|+++.+..|.++++|++|+|++|+|
T Consensus 9 ~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i 88 (635)
T 4g8a_A 9 DDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI 88 (635)
T ss_dssp ----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcC
Confidence 33445555432 1245643 35778642 3799999999999988888999999999999999999
Q ss_pred CCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccc-cCCcc
Q 007286 103 TGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVH 181 (609)
Q Consensus 103 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ip~~ 181 (609)
++..|..|.+|++|++|+|++|+|++..+..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|.+++ .+|..
T Consensus 89 ~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~ 168 (635)
T 4g8a_A 89 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchh
Confidence 97778889999999999999999997666789999999999999999997666789999999999999999975 35655
Q ss_pred c---ccCCcccCCCCCCCC
Q 007286 182 L---FQIPKYNFTGNNLNC 197 (609)
Q Consensus 182 l---~~l~~l~~~~n~~~c 197 (609)
+ .+|..|++++|....
T Consensus 169 ~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 169 FSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp GGGCTTCCEEECCSSCCCE
T ss_pred hccchhhhhhcccCccccc
Confidence 4 466778899987654
No 278
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.68 E-value=4.1e-17 Score=163.50 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=75.6
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+|+.|+|++|.+++..|..+..+++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 185 (285)
T 1ozn_A 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH 185 (285)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC
Confidence 45555555555555555555555555555555555554444445555666666666666654444445556666666666
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c~~~ 200 (609)
+|++++..|..+..+++|+.|++++|++++..|.. +.+|..|++++|++.|+++
T Consensus 186 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 186 QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 66666555556666666666666666666433322 2344456666666666553
No 279
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=4.4e-17 Score=167.25 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=101.0
Q ss_pred hcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCC-------------CchHHHHHHHHHHHHhccCCCcceeeeE
Q 007286 283 TDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFES-------------PGGDAAFQREVEMISVAVHRNLLRLIGF 349 (609)
Q Consensus 283 ~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-------------~~~~~~~~~E~~~l~~l~H~niv~l~~~ 349 (609)
..-|++.+.||+|+||.||+|...+|+.||||+++.... .........++++.+...|+|+++++..
T Consensus 94 g~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~ 173 (397)
T 4gyi_A 94 KDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE 173 (397)
T ss_dssp TSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 334889999999999999999999999999998753110 1112233333333333344444444322
Q ss_pred eeC------CCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCC
Q 007286 350 CTT------PTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDE 423 (609)
Q Consensus 350 ~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 423 (609)
... ....++||||+++++|...... .....++.|++.+|.|||+. +||||||||.|||+++
T Consensus 174 gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 174 GFPVPEPIAQSRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp TCSCCCEEEEETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCCeeeeccCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 111 1234799999999888654321 12356789999999999999 9999999999999987
Q ss_pred CC----------cEEEcccccceee
Q 007286 424 DF----------EAVVGDFGLAKLV 438 (609)
Q Consensus 424 ~~----------~~kl~DfGla~~~ 438 (609)
++ .+.|+||+-+-..
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999987644
No 280
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.68 E-value=2e-17 Score=171.64 Aligned_cols=121 Identities=23% Similarity=0.259 Sum_probs=75.3
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCcccc-CCCCCCEEEccCCCcCCCCCcccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 123 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 123 (609)
|.+..|.|.+. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45666666541 2466667777766666555555 666666666666666655555666666666666666
Q ss_pred ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCccc
Q 007286 124 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 124 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 175 (609)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 6666555555666666666666666666555556666666666666666665
No 281
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=7e-17 Score=151.89 Aligned_cols=123 Identities=25% Similarity=0.380 Sum_probs=110.7
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 124 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 124 (609)
|.|..|.|++. .+++.|+|++|+|+ .+|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56788888652 37999999999999 77889999999999999999999888888999999999999999
Q ss_pred cccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccC
Q 007286 125 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQI 178 (609)
Q Consensus 125 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~i 178 (609)
+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++...-
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888889999999999999999999555567899999999999999998543
No 282
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.67 E-value=5.7e-17 Score=168.25 Aligned_cols=135 Identities=27% Similarity=0.301 Sum_probs=118.2
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
+..+|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 44689999999999998888899999999999999999997777789999999999999999998889999999999999
Q ss_pred hccCCcCCCCcCCC-c---CcccccccccCCCCcccccCC-cccccC-----CcccCCCCCCCCCCC
Q 007286 144 TLSQNNFSGTIPDS-L---TTLSSLISIQLDSNNLSGQIP-VHLFQI-----PKYNFTGNNLNCGKT 200 (609)
Q Consensus 144 ~l~~N~l~~~~p~~-~---~~l~~L~~L~l~~N~l~~~ip-~~l~~l-----~~l~~~~n~~~c~~~ 200 (609)
+|++|+|+ .+|.. + ..+++|+.|+|++|+|++ +| ..+..+ ..|++.+|++.|+|.
T Consensus 142 ~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 142 YLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLKK-LPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp ECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCCC-CCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred ECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCCc-cCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 99999999 56554 4 579999999999999994 55 455554 458999999999875
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=6.5e-17 Score=173.17 Aligned_cols=135 Identities=26% Similarity=0.258 Sum_probs=124.8
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|+|++|.+++..|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|+.|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999888999999999999999999999888899999999999999
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c~~~ 200 (609)
++|++++..|..+..+++|++|+|++|+|++..+.. +.+|..|++++|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999888999999999999999999999644433 4567788999999999886
No 284
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.66 E-value=6.3e-17 Score=163.83 Aligned_cols=133 Identities=25% Similarity=0.325 Sum_probs=67.4
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCC-CCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG-EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
+|+.|+|++|.+.+..+..+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 44555555555554444445555555555555555543 34445555555555555555555444555555555555555
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc----cCCcccCCCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF----QIPKYNFTGNNLNCGK 199 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~----~l~~l~~~~n~~~c~~ 199 (609)
++|++++..+..+..+++|++|+|++|++++..|..+. ++..|++++|++.|++
T Consensus 207 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp TTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 55555533333445555555555555555554444332 3334555555555544
No 285
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.65 E-value=1.5e-16 Score=153.00 Aligned_cols=115 Identities=19% Similarity=0.228 Sum_probs=109.1
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 45899999999999988888999999999999999999988888899999999999999999988899999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999997766
No 286
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.65 E-value=1.4e-16 Score=163.01 Aligned_cols=131 Identities=22% Similarity=0.307 Sum_probs=116.5
Q ss_pred CCCeEEEEecCCCcccccCccccC---------CCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCcccc
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGV---------LRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLG 135 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 135 (609)
..+|+.|+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..++++++|++|+|++|+++ .+|..|+
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc
Confidence 358999999999999999988765 999999999999999 88999999999999999999999 5777899
Q ss_pred CcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCC
Q 007286 136 NLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 197 (609)
Q Consensus 136 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c 197 (609)
++++|+.|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+. +|..|++++|+...
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS 291 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh
Confidence 999999999999999999999999999999999999999999997665 45667889887654
No 287
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.65 E-value=1.2e-16 Score=178.16 Aligned_cols=136 Identities=24% Similarity=0.316 Sum_probs=124.4
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCc-CCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGI-TGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+++.++++.|.+.+..+..+..+++|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.+|++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 4789999999999999999999999999999999985 446788999999999999999999999999999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc----cCCcccCCCCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF----QIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~----~l~~l~~~~n~~~c~~~~ 201 (609)
|++|+|++..|..|..+++|++|+|++|+|++..|..+. +|..|++++|+|.|+|..
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 999999987788899999999999999999988887764 566799999999999863
No 288
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=3.7e-16 Score=144.76 Aligned_cols=130 Identities=21% Similarity=0.268 Sum_probs=111.4
Q ss_pred eEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccC
Q 007286 68 VASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 147 (609)
Q Consensus 68 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 147 (609)
.+.+++++|+++ .+|..+ .++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 468999999998 556544 47999999999999977777789999999999999999976667789999999999999
Q ss_pred CcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCCCCC
Q 007286 148 NNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 148 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c~~~ 200 (609)
|+|++..+..+..+++|++|+|++|++++..+.. +.+|..|++++|++.|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999777777899999999999999999544433 3567788999999998764
No 289
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=1.5e-16 Score=146.03 Aligned_cols=128 Identities=23% Similarity=0.277 Sum_probs=111.6
Q ss_pred CCeEEEEecCCCcc-cccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 47999999999998 88898899999999999999999965 7799999999999999999987888888899999999
Q ss_pred ccCCcCCCCcC--CCcCcccccccccCCCCcccccCC---cc---cccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIP--DSLTTLSSLISIQLDSNNLSGQIP---VH---LFQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~ip---~~---l~~l~~l~~~~n~~~ 196 (609)
|++|+|++ +| ..+..+++|++|++++|++++..+ .. +.+|..|++.+|...
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 99999994 44 788999999999999999995444 23 446666788877653
No 290
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.64 E-value=5.1e-16 Score=154.66 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=114.1
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|+.|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 69999999999998888899999999999999999997777789999999999999999998888889999999999999
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccc-cCCcccc---cCCcccCCCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ip~~l~---~l~~l~~~~n~~~ 196 (609)
+|++++..+..+..+++|++|++++|.+++ .+|..+. +|..|++++|...
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 999997666689999999999999999986 3676654 5666788888653
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.63 E-value=1.8e-16 Score=176.11 Aligned_cols=135 Identities=23% Similarity=0.248 Sum_probs=113.3
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCC-CCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG-EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+|+.|+|++|.+++..|..+..+++|++|+|++|++++ .+|..+.++++|+.|+|++|++++..|..|+++++|+.|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 478888888888888888888888888888888888887 3788888888899999999988888888888899999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc----cCCcccCCCCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF----QIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~----~l~~l~~~~n~~~c~~~~ 201 (609)
|++|++++.+|..+..+++|+.|+|++|+|+ .+|..+. ++..+++++|++.|+|+.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999998877888888899999999999988 6776554 356688999999988764
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.63 E-value=5e-16 Score=172.21 Aligned_cols=153 Identities=16% Similarity=0.183 Sum_probs=111.5
Q ss_pred CcCCCCCCCCCCCC----cceeEEcC-----------------CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCC
Q 007286 43 QLRDWNQNQVNPCT----WSNVICDN-----------------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG 101 (609)
Q Consensus 43 ~l~~w~~~~~~~c~----w~gv~c~~-----------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 101 (609)
.+++|.+. ++||. |.++.|+. ..+++.|++++|.+....+..+..+++|++|+|++|.
T Consensus 8 ~l~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~ 86 (597)
T 3oja_B 8 NVKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQ 86 (597)
T ss_dssp ---CCCSE-ECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSC
T ss_pred cccCCCCC-CcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCC
Confidence 46788764 46663 77666641 1357788888888886666667778888888888888
Q ss_pred cCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc
Q 007286 102 ITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH 181 (609)
Q Consensus 102 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~ 181 (609)
|++..|..|+++++|++|+|++|.|++..|..|+++++|+.|+|++|.|++..+..|..+++|++|+|++|.+++..|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 88777778888888888888888888777777888888888888888888444445678888888888888888766655
Q ss_pred cc---cCCcccCCCCCCC
Q 007286 182 LF---QIPKYNFTGNNLN 196 (609)
Q Consensus 182 l~---~l~~l~~~~n~~~ 196 (609)
+. +|..|++++|...
T Consensus 167 ~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp TTTCTTCCEEECTTSCCS
T ss_pred hhcCCcCcEEECcCCCCC
Confidence 44 4556777777654
No 293
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.62 E-value=5.3e-16 Score=172.36 Aligned_cols=145 Identities=18% Similarity=0.212 Sum_probs=121.5
Q ss_pred CCCCc----ceeEEcC----------CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccc
Q 007286 53 NPCTW----SNVICDN----------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTS 118 (609)
Q Consensus 53 ~~c~w----~gv~c~~----------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 118 (609)
+||.+ ..|.|.+ ..+++.|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 55654 3567754 247999999999999888889999999999999999999888888999999999
Q ss_pred cccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccc-cCCcccc---cCCcccCCCCC
Q 007286 119 LDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGNN 194 (609)
Q Consensus 119 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ip~~l~---~l~~l~~~~n~ 194 (609)
|+|++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|.+++ .+|..+. +|+.|++++|.
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999998889999999999999999999997666889999999999999999985 6787665 55567788886
Q ss_pred CCC
Q 007286 195 LNC 197 (609)
Q Consensus 195 ~~c 197 (609)
...
T Consensus 165 l~~ 167 (606)
T 3vq2_A 165 IQT 167 (606)
T ss_dssp CCE
T ss_pred cee
Confidence 543
No 294
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.62 E-value=3.1e-16 Score=167.88 Aligned_cols=144 Identities=26% Similarity=0.324 Sum_probs=125.1
Q ss_pred CCCCcce--eEEcCC---------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCC-Cccccccccccccc
Q 007286 53 NPCTWSN--VICDNS---------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEI-PEELGNLSSLTSLD 120 (609)
Q Consensus 53 ~~c~w~g--v~c~~~---------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 120 (609)
..|.|.+ |.|++. .+|+.|+|++|++++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4466555 788653 47999999999999999999999999999999999998666 56799999999999
Q ss_pred cccccccccCCccccCcccchhhhccCCcCCCCcCCC--cCcccccccccCCCCcccccCCcc-c---ccCCcccCCCCC
Q 007286 121 LDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDS--LTTLSSLISIQLDSNNLSGQIPVH-L---FQIPKYNFTGNN 194 (609)
Q Consensus 121 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~ip~~-l---~~l~~l~~~~n~ 194 (609)
|++|++++..|..|+++++|++|+|++|++++.+|.. +..+++|++|+|++|++++..|.. + .+|..|++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866554 899999999999999999877864 3 566778899987
Q ss_pred CC
Q 007286 195 LN 196 (609)
Q Consensus 195 ~~ 196 (609)
..
T Consensus 166 l~ 167 (455)
T 3v47_A 166 VK 167 (455)
T ss_dssp BS
T ss_pred cc
Confidence 64
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.62 E-value=1.7e-16 Score=174.16 Aligned_cols=142 Identities=22% Similarity=0.323 Sum_probs=122.9
Q ss_pred CCCcceeEEcCC------------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccc
Q 007286 54 PCTWSNVICDNS------------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDL 121 (609)
Q Consensus 54 ~c~w~gv~c~~~------------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 121 (609)
.|.|.|+ |+.. .+|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899998 8642 37999999999999998999999999999999999999888889999999999999
Q ss_pred ccccccccCCccccCcccchhhhccCCcCCC-CcCCCcCcccccccccCCCCcccccCC-cccc---cCCcccCCCCCCC
Q 007286 122 DNNRLVGKIPPSLGNLKKLQFLTLSQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIP-VHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 122 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~---~l~~l~~~~n~~~ 196 (609)
++|++++..|..|+++++|++|+|++|++++ .+|..+.++++|++|++++|.+.+.+| ..+. +|..|++++|...
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999997777779999999999999999996 367889999999999999999666776 3444 5566778887654
No 296
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1.7e-16 Score=142.66 Aligned_cols=120 Identities=23% Similarity=0.293 Sum_probs=105.8
Q ss_pred CCeEEEEecCCCcc-cccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+++.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..++++++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47999999999999 88999999999999999999999965 6799999999999999999987998888999999999
Q ss_pred ccCCcCCCC-cCCCcCcccccccccCCCCcccccCC---cccccCCc
Q 007286 145 LSQNNFSGT-IPDSLTTLSSLISIQLDSNNLSGQIP---VHLFQIPK 187 (609)
Q Consensus 145 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~ip---~~l~~l~~ 187 (609)
|++|++++. .|..+..+++|++|++++|++++..+ ..+..+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~ 141 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQ 141 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCC
Confidence 999999953 34889999999999999999996544 34544444
No 297
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.61 E-value=3.9e-16 Score=176.27 Aligned_cols=171 Identities=20% Similarity=0.235 Sum_probs=85.1
Q ss_pred cCchhHHHHHHHHHhCCCCC-CCcCCCCCCCCCCCCcceeEEcCC-----------------CCeEEEEecCCCccc---
Q 007286 22 LSDYQGDALFALRTSLRVPN-NQLRDWNQNQVNPCTWSNVICDNS-----------------NNVASVTLSSMNFSG--- 80 (609)
Q Consensus 22 ~~~~~~~~l~~~k~~~~~~~-~~l~~w~~~~~~~c~w~gv~c~~~-----------------~~l~~L~L~~n~l~~--- 80 (609)
..+.++++|+++..++..+. ..-..|......+++|.+++++.. ..+..++|++|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecCCccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 34667788999887764322 222346554455567777666542 012333333333332
Q ss_pred ------ccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCc
Q 007286 81 ------TLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTI 154 (609)
Q Consensus 81 ------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 154 (609)
..+..+..+++|+.|+|++|.|. .+|..+.+|++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 22455666677777777777776 66666667777777777777777 66777777777777777777777 66
Q ss_pred CCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCC
Q 007286 155 PDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 155 p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~ 196 (609)
|..|..|++|++|+|++|.|+ .+|..|. +|..|++++|+..
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 777777777777777777776 6665443 3445666666654
No 298
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.61 E-value=3.9e-16 Score=152.06 Aligned_cols=129 Identities=18% Similarity=0.209 Sum_probs=111.6
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCC-cCCCCCcccccccccccccccc-ccccccCCccccCcccchhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG-ITGEIPEELGNLSSLTSLDLDN-NRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L 143 (609)
.+++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999998888899999999999999997 8866666899999999999999 99997777889999999999
Q ss_pred hccCCcCCCCcCCCcCcccccc---cccCCCC-cccccCCcccc---cCC-cccCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLI---SIQLDSN-NLSGQIPVHLF---QIP-KYNFTGNNLN 196 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~ip~~l~---~l~-~l~~~~n~~~ 196 (609)
+|++|++++ +|. +..+++|+ +|++++| .+++..+..|. ++. .|++++|...
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999994 887 88888888 9999999 99854444454 555 7888888754
No 299
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=9.2e-16 Score=147.44 Aligned_cols=113 Identities=23% Similarity=0.284 Sum_probs=104.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 35899999999999999999999999999999999999966566689999999999999999988899999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCccccc
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQ 177 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 177 (609)
|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999999977777899999999999999999753
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.61 E-value=9e-16 Score=163.65 Aligned_cols=134 Identities=27% Similarity=0.304 Sum_probs=106.6
Q ss_pred CCeEEEEecCCCcccccCc-------------------------cccCCCCCCEEEccCCCcCCCCCccccccccccccc
Q 007286 66 NNVASVTLSSMNFSGTLSP-------------------------RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLD 120 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 120 (609)
.+|+.|+|++|.+++..+. .|.++++|++|+|++|+|+ .+|. +..+++|+.|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEE
Confidence 4677777777776654433 4556677777777777777 5664 77888888889
Q ss_pred cccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCC
Q 007286 121 LDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNC 197 (609)
Q Consensus 121 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c 197 (609)
|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.. +.+|..|++++|++.|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 9999998888889999999999999999999888888999999999999999999555544 3567778999999999
Q ss_pred CCCC
Q 007286 198 GKTL 201 (609)
Q Consensus 198 ~~~~ 201 (609)
+|..
T Consensus 294 dC~l 297 (440)
T 3zyj_A 294 NCDI 297 (440)
T ss_dssp SSTT
T ss_pred CCCc
Confidence 8853
No 301
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.61 E-value=1.9e-15 Score=143.86 Aligned_cols=115 Identities=22% Similarity=0.240 Sum_probs=103.7
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 35899999999999977777789999999999999999977777789999999999999999977777799999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999997666678999999999999999987665
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.3e-16 Score=161.97 Aligned_cols=143 Identities=22% Similarity=0.320 Sum_probs=119.9
Q ss_pred CCCCCcceeEEcCC------------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccc
Q 007286 52 VNPCTWSNVICDNS------------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSL 119 (609)
Q Consensus 52 ~~~c~w~gv~c~~~------------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 119 (609)
..+|.|.|+ |+.. .+|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 367889887 6532 379999999999998777799999999999999999998888889999999999
Q ss_pred ccccccccccCCccccCcccchhhhccCCcCCCCcCC--CcCcccccccccCCCCc-ccccCCcccc---cCCcccCCCC
Q 007286 120 DLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNN-LSGQIPVHLF---QIPKYNFTGN 193 (609)
Q Consensus 120 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~ip~~l~---~l~~l~~~~n 193 (609)
+|++|+|++..+..|+++++|++|+|++|+++ .+|. .+..+++|++|++++|+ +++..|..+. +|..|++++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 99999999544445999999999999999999 5665 78899999999999995 6644455554 5566788888
Q ss_pred CCC
Q 007286 194 NLN 196 (609)
Q Consensus 194 ~~~ 196 (609)
...
T Consensus 185 ~l~ 187 (353)
T 2z80_A 185 DLQ 187 (353)
T ss_dssp TCC
T ss_pred CcC
Confidence 653
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.61 E-value=1.2e-15 Score=152.77 Aligned_cols=131 Identities=21% Similarity=0.238 Sum_probs=112.9
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccc-ccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR-LVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ 144 (609)
.+++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+ ++...|..|..+++|+.|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 478999999999998888889999999999999999998778899999999999999997 8766688899999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~ 196 (609)
|++|++++..|..+..+++|++|++++|.+++..+..+ .+|..|++++|...
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 99999997778889999999999999999986554444 46677888888654
No 304
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.60 E-value=2.1e-15 Score=149.88 Aligned_cols=131 Identities=22% Similarity=0.274 Sum_probs=115.4
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++. +.+..+++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|+++++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 45899999999999964 4789999999999999999988888889999999999999999987777899999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLNC 197 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~c 197 (609)
|++|++++..|..+..+++|+.|++++|++++..|.. +.+|..|++++|....
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 9999999777777899999999999999999766644 4567778899987653
No 305
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.59 E-value=2.4e-16 Score=181.80 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=116.8
Q ss_pred CCCeEEEEecCCCcccccCc-cccCCCCCCEEEccCCCcC-----CCCCccccccccccccccccccccccCCccccCcc
Q 007286 65 SNNVASVTLSSMNFSGTLSP-RIGVLRTLSTLTLKGNGIT-----GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLK 138 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 138 (609)
..+|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|.+++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 35788888888888865443 4566888999999999987 44556788999999999999999988888999999
Q ss_pred cchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCCCCCCCC
Q 007286 139 KLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 139 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~~c~~~~ 201 (609)
+|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+.++..+++++|++.|+|+.
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 999999999999966666655 8999999999999999999999999999999999998763
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.59 E-value=1.5e-15 Score=162.61 Aligned_cols=135 Identities=23% Similarity=0.251 Sum_probs=109.2
Q ss_pred CCCeEEEEecCCCcccccCc-------------------------cccCCCCCCEEEccCCCcCCCCCcccccccccccc
Q 007286 65 SNNVASVTLSSMNFSGTLSP-------------------------RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSL 119 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 119 (609)
..+|+.|+|++|.+++..+. .|..+++|+.|+|++|+|+ .+| .+..+++|+.|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEE
Confidence 34788888888887754443 3556677777777777777 445 37788889999
Q ss_pred ccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCCCC
Q 007286 120 DLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNNLN 196 (609)
Q Consensus 120 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~~~ 196 (609)
+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+.. +.+|..|++++|++.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999888889999999999999999999888889999999999999999999554444 356777899999999
Q ss_pred CCCCC
Q 007286 197 CGKTL 201 (609)
Q Consensus 197 c~~~~ 201 (609)
|+|..
T Consensus 304 CdC~~ 308 (452)
T 3zyi_A 304 CDCDI 308 (452)
T ss_dssp CSTTT
T ss_pred CCCCc
Confidence 99863
No 307
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.58 E-value=1.6e-15 Score=163.39 Aligned_cols=141 Identities=20% Similarity=0.213 Sum_probs=121.8
Q ss_pred CcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccc
Q 007286 56 TWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 125 (609)
Q Consensus 56 ~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 125 (609)
.|..|.|.+. .+++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3677888642 378999999999998888999999999999999999998889999999999999999999
Q ss_pred ccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCC
Q 007286 126 LVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 126 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~ 196 (609)
|++..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|.+++..|..|. +|..|++++|...
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 9966566789999999999999999988888999999999999999999977675554 5666788888654
No 308
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=2.4e-15 Score=138.30 Aligned_cols=108 Identities=29% Similarity=0.312 Sum_probs=95.8
Q ss_pred EEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCC
Q 007286 69 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 148 (609)
Q Consensus 69 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 148 (609)
+.|++++|+++ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 46788889998 567666 489999999999999888999999999999999999999777777899999999999999
Q ss_pred cCCCCcCCCcCcccccccccCCCCcccccCC
Q 007286 149 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 149 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
+|++..|..|..+++|++|+|++|+++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999986544
No 309
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.58 E-value=1.9e-15 Score=150.59 Aligned_cols=135 Identities=20% Similarity=0.259 Sum_probs=91.5
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccccc-CCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK-IPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 144 (609)
.+|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++. +|..|.++++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 4677788888877777767777777777777777777765555677777777777777777652 567777777777777
Q ss_pred ccCCcCCCCcCCCcCc---------------------------ccccccccCCCCcccccCCcc---cccCCcccCCCCC
Q 007286 145 LSQNNFSGTIPDSLTT---------------------------LSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNN 194 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~---------------------------l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~ 194 (609)
|++|++++..+..+.. ..+|+.|+|++|++++..+.. +.++..|++++|+
T Consensus 156 Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 235 (276)
T 2z62_A 156 LSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNP 235 (276)
T ss_dssp CCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSC
T ss_pred CCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCc
Confidence 7777776443333332 235677777777777433333 3455667788888
Q ss_pred CCCCCC
Q 007286 195 LNCGKT 200 (609)
Q Consensus 195 ~~c~~~ 200 (609)
+.|+++
T Consensus 236 ~~c~c~ 241 (276)
T 2z62_A 236 WDCSCP 241 (276)
T ss_dssp BCCCTT
T ss_pred ccccCC
Confidence 877764
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.58 E-value=1.9e-15 Score=167.87 Aligned_cols=140 Identities=21% Similarity=0.208 Sum_probs=123.3
Q ss_pred cceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccc
Q 007286 57 WSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 126 (609)
Q Consensus 57 w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 126 (609)
+..|.|.+. .+++.|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456778652 4799999999999999899999999999999999999988899999999999999999999
Q ss_pred cccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccc-cCCcc--cccCCcccCCCCCCC
Q 007286 127 VGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVH--LFQIPKYNFTGNNLN 196 (609)
Q Consensus 127 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ip~~--l~~l~~l~~~~n~~~ 196 (609)
++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|.+++ .+|.. +.+|..|++++|...
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 166 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH 166 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc
Confidence 98889999999999999999999997668889999999999999999996 33532 457778888888764
No 311
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.58 E-value=1.5e-15 Score=159.25 Aligned_cols=151 Identities=17% Similarity=0.220 Sum_probs=118.1
Q ss_pred cCCCCCCCCCCCC----cceeEEcC-----------------CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCc
Q 007286 44 LRDWNQNQVNPCT----WSNVICDN-----------------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGI 102 (609)
Q Consensus 44 l~~w~~~~~~~c~----w~gv~c~~-----------------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 102 (609)
+++|... .+||. |.++.|+. ..+++.|++++|.++...+..+..+++|++|+|++|.+
T Consensus 3 ~~~~~~~-~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i 81 (390)
T 3o6n_A 3 VKPRQPE-YKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81 (390)
T ss_dssp ----CCE-ECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cCCCCCc-cceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcc
Confidence 5678754 56664 55555541 14789999999999866556678899999999999999
Q ss_pred CCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCC-CcCcccccccccCCCCcccccCCcc
Q 007286 103 TGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPD-SLTTLSSLISIQLDSNNLSGQIPVH 181 (609)
Q Consensus 103 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~ip~~ 181 (609)
++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|. .|..+++|++|++++|.+++..|..
T Consensus 82 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 160 (390)
T 3o6n_A 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160 (390)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred cccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhh
Confidence 9777778999999999999999999877888999999999999999999 5554 4688999999999999999766655
Q ss_pred c---ccCCcccCCCCCCC
Q 007286 182 L---FQIPKYNFTGNNLN 196 (609)
Q Consensus 182 l---~~l~~l~~~~n~~~ 196 (609)
+ .+|..|++++|...
T Consensus 161 ~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 161 FQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp TSSCTTCCEEECCSSCCS
T ss_pred ccCCCCCCEEECCCCcCC
Confidence 5 45667888888754
No 312
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=3.9e-15 Score=149.41 Aligned_cols=106 Identities=25% Similarity=0.290 Sum_probs=55.4
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+++.|+|++|.+++..+..|..+++|+.|+|++|.|++ +|.. +.+++|++|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 32 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~ 108 (290)
T 1p9a_G 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (290)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECC
Confidence 45666666666665555555555555555555555552 2221 44555555555555554 444445555555555555
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCccc
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 175 (609)
+|+|++..|..|..+++|++|+|++|+|+
T Consensus 109 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 109 FNRLTSLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred CCcCcccCHHHHcCCCCCCEEECCCCCCC
Confidence 55555333344555555555555555555
No 313
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.58 E-value=1.6e-15 Score=168.59 Aligned_cols=134 Identities=24% Similarity=0.279 Sum_probs=100.5
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCC---CCccccccccccccccccccccccCCccccCcccchh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE---IPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQF 142 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 142 (609)
.+|+.|+|++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..|.++++|+.
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 504 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCE
Confidence 4677777777777776777777777777777777777652 2355777777788888888877777777888888888
Q ss_pred hhccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 143 LTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 143 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
|+|++|++++..|..+..+++| +|++++|++++.+|..+ .++..+++++|++.|+|+
T Consensus 505 L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 8888888887777778888888 88888888886666543 466778888888888765
No 314
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.58 E-value=3.4e-15 Score=144.42 Aligned_cols=114 Identities=24% Similarity=0.234 Sum_probs=104.7
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 458999999999998777777899999999999999999777777899999999999999999 8999999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
|++|+|++..+..+..+++|+.|+|++|++++..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999996666789999999999999999997655
No 315
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.58 E-value=1.7e-15 Score=174.77 Aligned_cols=141 Identities=21% Similarity=0.235 Sum_probs=109.0
Q ss_pred CCcceeEEcCCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCC-CccccccccccccccccccccccCCcc
Q 007286 55 CTWSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEI-PEELGNLSSLTSLDLDNNRLVGKIPPS 133 (609)
Q Consensus 55 c~w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~ 133 (609)
|+|+.|.+ ...+++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.+|++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 56777777 5678889999999998888888888888888888888666566 677888888888888888888777888
Q ss_pred ccCcccchhhhccCCcCCCCcCCC--cCcccccccccCCCCcccccCC-ccc---ccCCcccCCCCCCC
Q 007286 134 LGNLKKLQFLTLSQNNFSGTIPDS--LTTLSSLISIQLDSNNLSGQIP-VHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 134 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~ip-~~l---~~l~~l~~~~n~~~ 196 (609)
|++|++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..+ .+|+.|++++|...
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 888888888888888888766654 7788888888888888876544 233 45555667776543
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.57 E-value=2.5e-15 Score=160.74 Aligned_cols=141 Identities=23% Similarity=0.251 Sum_probs=122.2
Q ss_pred cceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccc
Q 007286 57 WSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 126 (609)
Q Consensus 57 w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 126 (609)
|..|.|.+. .+++.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 677888652 3799999999999999999999999999999999999988889999999999999999999
Q ss_pred cccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCc----ccccCCcccCCCCCCCC
Q 007286 127 VGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 127 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~----~l~~l~~l~~~~n~~~c 197 (609)
++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|++++|+..+.+|. .+.+|..|++++|....
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 977777799999999999999999955566889999999999999655556764 34567778898887653
No 317
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.57 E-value=2.9e-15 Score=138.24 Aligned_cols=108 Identities=22% Similarity=0.247 Sum_probs=95.8
Q ss_pred EEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCC
Q 007286 69 ASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQN 148 (609)
Q Consensus 69 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 148 (609)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67999999997 7777664 89999999999999888999999999999999999999766666899999999999999
Q ss_pred cCCCCcCCCcCcccccccccCCCCcccccCCc
Q 007286 149 NFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV 180 (609)
Q Consensus 149 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~ 180 (609)
+|++..+..|..+++|++|+|++|++.. .|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT-TBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc-ccc
Confidence 9996555669999999999999999984 444
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.5e-15 Score=165.51 Aligned_cols=135 Identities=22% Similarity=0.284 Sum_probs=101.2
Q ss_pred CCeEEEEecCCCcccccC-ccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccc-ccCCccccCcccchhh
Q 007286 66 NNVASVTLSSMNFSGTLS-PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV-GKIPPSLGNLKKLQFL 143 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L 143 (609)
.+|+.|+|++|.+.+..| ..+..+++|++|+|++|.+++.+|..+.++++|++|+|++|+++ +.+|..|..+++|+.|
T Consensus 396 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L 475 (570)
T 2z63_A 396 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 475 (570)
T ss_dssp TTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEE
Confidence 355666666666665544 45677777777777777777777777888888888888888876 5678888888888888
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
+|++|++++..|..+..+++|++|++++|++++..|..+ .+|..|++++|++.|.++
T Consensus 476 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 476 DLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 888888887778888888888888888888886666544 355667788888887765
No 319
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.56 E-value=3.2e-15 Score=168.46 Aligned_cols=136 Identities=21% Similarity=0.223 Sum_probs=112.3
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCC--------ccccccccccccccccccccccCCccccCc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP--------EELGNLSSLTSLDLDNNRLVGKIPPSLGNL 137 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 137 (609)
.+|+.|+|++|++++..+..|..+++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 478888999999887777778889999999999998885321 237888999999999999994334468999
Q ss_pred ccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCc----ccccCCcccCCCCCCCCCCCC
Q 007286 138 KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 138 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~----~l~~l~~l~~~~n~~~c~~~~ 201 (609)
++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|. .+.++..+++++|++.|+|+.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999999966566678999999999999999976665 456788899999999999863
No 320
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.56 E-value=4.7e-15 Score=158.05 Aligned_cols=140 Identities=24% Similarity=0.229 Sum_probs=119.4
Q ss_pred cceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccc
Q 007286 57 WSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRL 126 (609)
Q Consensus 57 w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 126 (609)
|..|.|.+. .+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 677888652 4789999999999999889999999999999999999987788999999999999999999
Q ss_pred cccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCc----ccccCCcccCCCCCCC
Q 007286 127 VGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV----HLFQIPKYNFTGNNLN 196 (609)
Q Consensus 127 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~----~l~~l~~l~~~~n~~~ 196 (609)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+..+.+|. .+.+|..|++++|...
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 966666899999999999999999966666888999999999998655556664 2456677888888765
No 321
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.56 E-value=2.1e-15 Score=153.47 Aligned_cols=138 Identities=23% Similarity=0.295 Sum_probs=100.8
Q ss_pred cceeEEcCCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccc-ccccccccccccccccccCCcccc
Q 007286 57 WSNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG-NLSSLTSLDLDNNRLVGKIPPSLG 135 (609)
Q Consensus 57 w~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~ 135 (609)
..++.+....+|+.|+|++|.+++..+..+..+++|++|+|++|.|++..|..+. .+++|++|+|++|+|++. |. ..
T Consensus 111 l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~ 188 (317)
T 3o53_A 111 ISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QV 188 (317)
T ss_dssp CSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CC
T ss_pred cCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-cc
Confidence 3444455555677888888888877777777788888888888888866666663 678888888888888744 32 33
Q ss_pred CcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCC
Q 007286 136 NLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCG 198 (609)
Q Consensus 136 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~ 198 (609)
.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+ .+|..+ .++..|++++|++.|+
T Consensus 189 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 189 VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 4788888888888888 55556778888888888888888 567554 4566677888888765
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.56 E-value=2.2e-15 Score=142.15 Aligned_cols=123 Identities=22% Similarity=0.305 Sum_probs=58.2
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+|+.|+|++|.++ .++.+..+++|++|+|++|++++..|..++++++|++|+|++|++++..|..|+.+++|+.|+|+
T Consensus 67 ~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 67 NIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp TCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 4555555555333 11244445555555555555554444445555555555555555554444445555555555555
Q ss_pred CCc-CCCCcCCCcCcccccccccCCCCcccccCC--cccccCCcccCCCCC
Q 007286 147 QNN-FSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNN 194 (609)
Q Consensus 147 ~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip--~~l~~l~~l~~~~n~ 194 (609)
+|+ ++ .+| .+..+++|+.|++++|++++ +| ..+.+|..|++++|+
T Consensus 145 ~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 145 YNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp SCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred CCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 554 33 333 34455555555555555542 22 122334444444444
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.56 E-value=3.4e-15 Score=164.35 Aligned_cols=134 Identities=23% Similarity=0.344 Sum_probs=86.4
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCC--CCCccccccccccccccccccccccCCcc-ccCc----
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG--EIPEELGNLSSLTSLDLDNNRLVGKIPPS-LGNL---- 137 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l---- 137 (609)
..+++.|+|++|.+++.+|..+..+++|++|+|++|+|++ .+|..+.++++|++|+|++|++++.+|.. +..+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 4466777777777776666666666666666666666664 22345666666666666666666534432 3333
Q ss_pred ------------------ccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcc-c---ccCCcccCCCCCC
Q 007286 138 ------------------KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVH-L---FQIPKYNFTGNNL 195 (609)
Q Consensus 138 ------------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~-l---~~l~~l~~~~n~~ 195 (609)
++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. + .++..|++++|++
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCB
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCc
Confidence 46666666666666 66666667777888888888887 56654 3 3455677788888
Q ss_pred CCCCC
Q 007286 196 NCGKT 200 (609)
Q Consensus 196 ~c~~~ 200 (609)
.|+|+
T Consensus 510 ~c~c~ 514 (562)
T 3a79_B 510 DCTCP 514 (562)
T ss_dssp CCCHH
T ss_pred CCCcc
Confidence 77664
No 324
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=3.2e-15 Score=163.78 Aligned_cols=108 Identities=24% Similarity=0.361 Sum_probs=100.5
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
.|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|++|++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999996 565 999999999999999999 899999999999999999999996 77 89999999999999
Q ss_pred CCcCCCCc-CCCcCcccccccccCCCCcccccCC
Q 007286 147 QNNFSGTI-PDSLTTLSSLISIQLDSNNLSGQIP 179 (609)
Q Consensus 147 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~ip 179 (609)
+|+|++.. |..+..+++|+.|+|++|+|++.+|
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 99999776 9999999999999999999997655
No 325
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.55 E-value=2.4e-15 Score=163.96 Aligned_cols=135 Identities=24% Similarity=0.312 Sum_probs=83.3
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCC--CCCccccccccccccccccccccccCCcc-ccCcccc
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITG--EIPEELGNLSSLTSLDLDNNRLVGKIPPS-LGNLKKL 140 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 140 (609)
...+++.|+|++|.+++.+|..++.+++|++|+|++|+|++ .+|..+.++++|++|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 34567777777777777777777777777777777777775 45566777777777777777777645543 5555555
Q ss_pred hhhhccCCcCCC---------------------CcCCCcCcccccccccCCCCcccccCCcc-c---ccCCcccCCCCCC
Q 007286 141 QFLTLSQNNFSG---------------------TIPDSLTTLSSLISIQLDSNNLSGQIPVH-L---FQIPKYNFTGNNL 195 (609)
Q Consensus 141 ~~L~l~~N~l~~---------------------~~p~~~~~l~~L~~L~l~~N~l~~~ip~~-l---~~l~~l~~~~n~~ 195 (609)
+.|+|++|++++ .+|..+..+++|++|+|++|+|+ .+|.. + .++..|++++|++
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCC
Confidence 555555555544 44544445555566666666655 34432 2 2344455666666
Q ss_pred CCCC
Q 007286 196 NCGK 199 (609)
Q Consensus 196 ~c~~ 199 (609)
.|+|
T Consensus 481 ~c~c 484 (520)
T 2z7x_B 481 DCSC 484 (520)
T ss_dssp CCCH
T ss_pred cccC
Confidence 5554
No 326
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.55 E-value=6.5e-15 Score=150.84 Aligned_cols=139 Identities=22% Similarity=0.314 Sum_probs=120.4
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 124 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 124 (609)
|.|+.+.|++. .+++.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999752 37999999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCccc--ccCCcccc--cCCcccCCCCCCC
Q 007286 125 RLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS--GQIPVHLF--QIPKYNFTGNNLN 196 (609)
Q Consensus 125 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~ip~~l~--~l~~l~~~~n~~~ 196 (609)
+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|++++|.++ +..|..+. ++..|++++|...
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT 185 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCS
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCC
Confidence 999 7787765 89999999999999655567899999999999999996 35565554 6777888888754
No 327
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.55 E-value=5.2e-15 Score=149.70 Aligned_cols=130 Identities=21% Similarity=0.263 Sum_probs=79.4
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCC-ccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP-EELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+|+.|+|++|.++ .+|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|++++..|..|.++++|+.|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 46677777777666 345556666666666666666664433 3566666666666666666666666666666666666
Q ss_pred ccCCcCCC-CcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCC
Q 007286 145 LSQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~ 196 (609)
|++|.+++ .+|..+..+++|++|++++|.+++..|..+. +|..|++++|...
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 66666664 3566666666666666666666654454433 3444556666543
No 328
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.55 E-value=1.2e-15 Score=172.24 Aligned_cols=129 Identities=29% Similarity=0.413 Sum_probs=116.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 458999999999999 78888889999999999999999 99999999999999999999999 8899999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCC----cccCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIP----KYNFTGNNLNC 197 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~----~l~~~~n~~~c 197 (609)
|++|.|+ .+|..|..|++|+.|+|++|.|++.+|..+..+. .+++.+|....
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 9999998 8999999999999999999999999998775432 25677776643
No 329
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.55 E-value=1.1e-15 Score=170.74 Aligned_cols=130 Identities=19% Similarity=0.343 Sum_probs=118.6
Q ss_pred CCCeEEEEecCCCcccc-----------------cCcccc--CCCCCCEEEccCCCcCCCCCcccccccccccccccccc
Q 007286 65 SNNVASVTLSSMNFSGT-----------------LSPRIG--VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 125 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 125 (609)
..+|+.|+|++|.++|. +|..++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999986 999999 99999999999999999999999999999999999998
Q ss_pred -ccc-cCCccccCc------ccchhhhccCCcCCCCcCC--CcCcccccccccCCCCcccccCCccc---ccCCcccCCC
Q 007286 126 -LVG-KIPPSLGNL------KKLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTG 192 (609)
Q Consensus 126 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~ 192 (609)
++| .+|..++++ ++|+.|+|++|+++ .+|. .+.++++|++|++++|+++|.+| .+ .+|..|++++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 998 899988887 99999999999999 8998 89999999999999999999999 55 4566788888
Q ss_pred CCCC
Q 007286 193 NNLN 196 (609)
Q Consensus 193 n~~~ 196 (609)
|...
T Consensus 363 N~l~ 366 (636)
T 4eco_A 363 NQIT 366 (636)
T ss_dssp SEEE
T ss_pred Cccc
Confidence 8654
No 330
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.54 E-value=7.3e-15 Score=165.51 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=102.0
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 37888888888888777777888888888888888888777888888888888888888888544446888888888888
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~ 196 (609)
++|++++..|..|.++++|++|++++|.+++..|..+ .+|..|++++|...
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc
Confidence 8888886666778888888888888888887666544 35556677777543
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=2.1e-15 Score=167.12 Aligned_cols=130 Identities=18% Similarity=0.245 Sum_probs=113.8
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|++++. +.+..+++|+.|+|++|.|++.+|..|+++++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 232 ~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 232 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp SCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 4688888888888863 678889999999999999998889999999999999999999995 6778888999999999
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLNCGK 199 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~~c~~ 199 (609)
++|.++ .+|..+..+++|++|+|++|.|++..+..+.+|..|++++|++.|.+
T Consensus 309 s~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 309 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcCCCCEEEeeCCCCCChh
Confidence 999999 78888889999999999999998665577788899999999998865
No 332
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=4.6e-15 Score=137.22 Aligned_cols=125 Identities=19% Similarity=0.219 Sum_probs=103.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCC-CCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLR-TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
..+++.|+|++|+++. +|. +..+. +|+.|+|++|.|++. ..|.++++|++|+|++|+|++..|..|..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3489999999999994 454 55555 999999999999964 579999999999999999996544556999999999
Q ss_pred hccCCcCCCCcCC--CcCcccccccccCCCCcccccCCcc----c---ccCCcccCCCCCC
Q 007286 144 TLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVH----L---FQIPKYNFTGNNL 195 (609)
Q Consensus 144 ~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~ip~~----l---~~l~~l~~~~n~~ 195 (609)
+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. + .++..|++++|..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 99999997 7776 8899999999999999998 67763 4 4555667776653
No 333
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=1.2e-14 Score=152.33 Aligned_cols=131 Identities=24% Similarity=0.215 Sum_probs=117.7
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.+++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 58999999999999888889999999999999999999888888999999999999999999444445799999999999
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~~ 196 (609)
++|++++..|..+..+++|++|++++|.+++.-...+.++..|++++|...
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccc
Confidence 999999777888999999999999999999654467788888999888653
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.53 E-value=1.3e-15 Score=154.75 Aligned_cols=132 Identities=18% Similarity=0.238 Sum_probs=106.2
Q ss_pred CCCeEEEEecCCCcccccCccc--cCCCCCCEEEccCCCcCCCCCcccccc-----ccccccccccccccccCCccccCc
Q 007286 65 SNNVASVTLSSMNFSGTLSPRI--GVLRTLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGKIPPSLGNL 137 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l 137 (609)
..+|+.|+|++|++++.+|..+ ..+++|++|+|++|+|++. |..++.+ ++|++|+|++|+|++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4578999999999998888876 8899999999999999866 8888887 889999999999987777889999
Q ss_pred ccchhhhccCCcCCCC--cCCCc--CcccccccccCCCCcccc--cCCc----ccccCCcccCCCCCCCC
Q 007286 138 KKLQFLTLSQNNFSGT--IPDSL--TTLSSLISIQLDSNNLSG--QIPV----HLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 138 ~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~--~ip~----~l~~l~~l~~~~n~~~c 197 (609)
++|+.|+|++|++.|. +|..+ ..+++|++|+|++|+|++ .++. .+.+|..|++++|....
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRD 242 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCS
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCc
Confidence 9999999999998765 33344 788889999999999883 2332 23578888888887643
No 335
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.53 E-value=5e-15 Score=139.69 Aligned_cols=128 Identities=23% Similarity=0.327 Sum_probs=111.5
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|+++ .+| .+..+++|++|+|++|.++ .+ ..+..+++|++|+|++|++++..|..|+.+++|+.|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 348999999999999 666 6999999999999999876 44 4799999999999999999988899999999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCc--ccccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~ 196 (609)
|++|++++..|..+..+++|++|++++|.+.+.+|. .+.+|..|++++|...
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCC
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCc
Confidence 999999987888999999999999999983336772 3456777889888754
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.52 E-value=7.5e-15 Score=158.19 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=101.8
Q ss_pred eEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccC
Q 007286 68 VASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 147 (609)
Q Consensus 68 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 147 (609)
|+.|+|++|.+.+.+|..+....+|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 33344444333333333333344566666667777743335688899999999999999988888899999999999999
Q ss_pred CcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCCCCCC
Q 007286 148 NNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 148 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~~ 201 (609)
|++++..|..|..+++|+.|+|++|+|++..+..| .+|..|++++|++.|+|..
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 99998889999999999999999999996444444 4677899999999998753
No 337
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=1.5e-14 Score=133.03 Aligned_cols=107 Identities=18% Similarity=0.280 Sum_probs=93.9
Q ss_pred CCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCC
Q 007286 91 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 170 (609)
Q Consensus 91 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 170 (609)
..+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3579999999999 6887774 899999999999998889999999999999999999997666778999999999999
Q ss_pred CCcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 171 SNNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 171 ~N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
+|+|++..|..| .+|..|++++|++.|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999996555444 567778999999999874
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=158.98 Aligned_cols=131 Identities=18% Similarity=0.171 Sum_probs=103.0
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 36888888888888777778888888888888888888766777888888888888888888777778888888888888
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccc-cCCcccc---cCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSG-QIPVHLF---QIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~ip~~l~---~l~~l~~~~n~~~ 196 (609)
++|++++..+..+.++++|++|++++|.+++ .+|..+. +|+.|++++|...
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 8888885444468888888888888888875 4676554 4556777777653
No 339
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.52 E-value=1.1e-14 Score=150.00 Aligned_cols=133 Identities=19% Similarity=0.161 Sum_probs=105.0
Q ss_pred CCcceeEEcCCCCeEEEEecCC-CcccccCccccCCCCCCEEEccC-CCcCCCCCccccccccccccccccccccccCCc
Q 007286 55 CTWSNVICDNSNNVASVTLSSM-NFSGTLSPRIGVLRTLSTLTLKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP 132 (609)
Q Consensus 55 c~w~gv~c~~~~~l~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 132 (609)
|.|.+|.|+ ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 888877775 34 677 4777 99999999999996 999987778999999999999999999999999
Q ss_pred cccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCC-ccccc---CCcccCCCCCCCCCCCC
Q 007286 133 SLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQ---IPKYNFTGNNLNCGKTL 201 (609)
Q Consensus 133 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~---l~~l~~~~n~~~c~~~~ 201 (609)
.|.+|++|+.|+|++|+|++..|..+..++ |+.|+|++|+|...-. ..|.. .....+..+...|..+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999999999999999999965555566555 9999999999984332 12221 22233445666676543
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.52 E-value=7.7e-15 Score=148.77 Aligned_cols=131 Identities=20% Similarity=0.240 Sum_probs=109.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCC--C--CccccccccccccccccccccccCCc----cccC
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE--I--PEELGNLSSLTSLDLDNNRLVGKIPP----SLGN 136 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 136 (609)
..+|+.|+|++|.+.+..+..|..+++|++|+|++|++.+. + +..+.++++|++|+|++|+|+ .+|. .+++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 45899999999999988889999999999999999998753 2 233478999999999999997 4444 3578
Q ss_pred cccchhhhccCCcCCCCcCCCcCcc---cccccccCCCCcccccCCccc-ccCCcccCCCCCCCC
Q 007286 137 LKKLQFLTLSQNNFSGTIPDSLTTL---SSLISIQLDSNNLSGQIPVHL-FQIPKYNFTGNNLNC 197 (609)
Q Consensus 137 l~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~ip~~l-~~l~~l~~~~n~~~c 197 (609)
+++|++|+|++|+|++.+|..+..+ ++|++|+|++|+|+ .+|..+ .+|..|++++|....
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 8999999999999998878877777 69999999999999 678654 578889999998653
No 341
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.52 E-value=5e-15 Score=161.52 Aligned_cols=137 Identities=25% Similarity=0.385 Sum_probs=114.1
Q ss_pred CcCCCCCCCCCCC-----Cccee-EEcCCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccc
Q 007286 43 QLRDWNQNQVNPC-----TWSNV-ICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSL 116 (609)
Q Consensus 43 ~l~~w~~~~~~~c-----~w~gv-~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 116 (609)
.+.+|.. +.+|| .|.|+ .|.. ++|+.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| ..+++|
T Consensus 32 ~l~~W~~-~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEK-QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHT-TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhc-cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCC
Confidence 3567865 45778 69999 7864 489999999999997 77766 488999999999999 788 457899
Q ss_pred cccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCCC
Q 007286 117 TSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 117 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~~ 196 (609)
++|+|++|+|++ +|. |.+ +|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|..+.+|..|++++|...
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLT 173 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCC
Confidence 999999999996 787 766 99999999999995 777 67899999999999985 8877778888999998765
Q ss_pred C
Q 007286 197 C 197 (609)
Q Consensus 197 c 197 (609)
.
T Consensus 174 ~ 174 (571)
T 3cvr_A 174 F 174 (571)
T ss_dssp C
T ss_pred C
Confidence 4
No 342
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.51 E-value=3.8e-15 Score=151.17 Aligned_cols=131 Identities=18% Similarity=0.235 Sum_probs=90.9
Q ss_pred CCCeEEEEecCCCcccccCccccCC-----CCCCEEEccCCCcCCCCCcccccccccccccccccccccc--CCccc--c
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVL-----RTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK--IPPSL--G 135 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 135 (609)
..+|+.|+|++|.+++. |..++.+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.|. +|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 35788888888888866 7777766 7888888888888877777788888888888888887655 23333 6
Q ss_pred CcccchhhhccCCcCCC--CcC-CCcCcccccccccCCCCcccccCCc-c---cccCCcccCCCCCCC
Q 007286 136 NLKKLQFLTLSQNNFSG--TIP-DSLTTLSSLISIQLDSNNLSGQIPV-H---LFQIPKYNFTGNNLN 196 (609)
Q Consensus 136 ~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~ip~-~---l~~l~~l~~~~n~~~ 196 (609)
++++|+.|+|++|+|++ .++ ..+..+++|++|+|++|++++.+|. . +.+|..|++++|...
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 77777777777777772 122 2234567777777777777765542 2 346666777777654
No 343
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.51 E-value=1.6e-14 Score=147.74 Aligned_cols=140 Identities=22% Similarity=0.320 Sum_probs=119.2
Q ss_pred CCCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccc
Q 007286 54 PCTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDN 123 (609)
Q Consensus 54 ~c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 123 (609)
.|.|+.+.|++. .+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 357999999742 3789999999999988888999999999999999999988899999999999999999
Q ss_pred ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccc--cCCccc---ccCCcccCCCCCCC
Q 007286 124 NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSG--QIPVHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 124 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~ip~~l---~~l~~l~~~~n~~~ 196 (609)
|+|+ .+|..+. ++|+.|++++|++++..+..+.++++|+.|++++|.++. ..|..+ .+|..|++++|...
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 9999 7787665 799999999999996666778899999999999999963 555554 45666778887654
No 344
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.51 E-value=2.5e-14 Score=146.37 Aligned_cols=129 Identities=29% Similarity=0.368 Sum_probs=97.4
Q ss_pred CCCeEEEEecCCCcc--cccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchh
Q 007286 65 SNNVASVTLSSMNFS--GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQF 142 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 142 (609)
..+|+.|+|++|.+. +..+..+..+++|+.|+|++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|+.
T Consensus 144 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 457888889888886 366777888888888888888887 5665554 67888888888888777777888888888
Q ss_pred hhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccc---cCCcccCCCCCCCC
Q 007286 143 LTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFTGNNLNC 197 (609)
Q Consensus 143 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~~n~~~c 197 (609)
|+|++|++++..|..+..+++|++|+|++|+++ .+|..+. +|..|++++|+...
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCc
Confidence 888888887666667777888888888888887 6776554 45556777776543
No 345
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=5.3e-15 Score=168.81 Aligned_cols=129 Identities=18% Similarity=0.290 Sum_probs=114.8
Q ss_pred CCCeEEEEecCCCccc-----------------ccCcccc--CCCCCCEEEccCCCcCCCCCcccccccccccccccccc
Q 007286 65 SNNVASVTLSSMNFSG-----------------TLSPRIG--VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR 125 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 125 (609)
..+|+.|+|++|+|+| .+|..++ ++++|+.|+|++|++.|.+|..|++|++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4689999999999998 4899988 99999999999999999999999999999999999998
Q ss_pred -ccc-cCCccccCcc-------cchhhhccCCcCCCCcCC--CcCcccccccccCCCCcccccCCcccc---cCCcccCC
Q 007286 126 -LVG-KIPPSLGNLK-------KLQFLTLSQNNFSGTIPD--SLTTLSSLISIQLDSNNLSGQIPVHLF---QIPKYNFT 191 (609)
Q Consensus 126 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~ip~~l~---~l~~l~~~ 191 (609)
|+| .+|..|++++ +|+.|+|++|+|+ .+|. .+.++++|+.|+|++|+++ .+| .+. +|..|+++
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 998 8998777776 9999999999999 8998 8999999999999999998 888 554 55667888
Q ss_pred CCCCC
Q 007286 192 GNNLN 196 (609)
Q Consensus 192 ~n~~~ 196 (609)
+|...
T Consensus 604 ~N~l~ 608 (876)
T 4ecn_A 604 YNQIE 608 (876)
T ss_dssp SSCCS
T ss_pred CCccc
Confidence 88765
No 346
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.50 E-value=1e-14 Score=160.47 Aligned_cols=127 Identities=21% Similarity=0.199 Sum_probs=109.6
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 58999999999999888889999999999999999999888889999999999999999999 67776 8999999999
Q ss_pred cCCcCCC-CcCCCcCcccccccccCCCCcccccCCcccccC--CcccCCCCCC
Q 007286 146 SQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNL 195 (609)
Q Consensus 146 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l--~~l~~~~n~~ 195 (609)
++|++++ .+|..|.++++|++|++++|++++.....+.++ +.|++++|..
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccc
Confidence 9999985 346789999999999999999986444555566 7788888865
No 347
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=147.45 Aligned_cols=131 Identities=18% Similarity=0.183 Sum_probs=108.9
Q ss_pred CCCeEEEEecCCCcccccC----ccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccccc--C--CccccC
Q 007286 65 SNNVASVTLSSMNFSGTLS----PRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK--I--PPSLGN 136 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~ 136 (609)
..+|+.|+|++|.+++..+ ..+..+++|++|+|++|+|++..|..|+++++|++|+|++|++.+. + +..++.
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 4589999999999997655 4456799999999999999988888999999999999999998752 2 234578
Q ss_pred cccchhhhccCCcCCCCcCC----CcCcccccccccCCCCcccccCCccc------ccCCcccCCCCCCC
Q 007286 137 LKKLQFLTLSQNNFSGTIPD----SLTTLSSLISIQLDSNNLSGQIPVHL------FQIPKYNFTGNNLN 196 (609)
Q Consensus 137 l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~ip~~l------~~l~~l~~~~n~~~ 196 (609)
+++|++|+|++|+++ .+|. .+..+++|++|+|++|+|++.+|..+ .+|..|++++|...
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC
Confidence 999999999999998 5544 24678999999999999998877544 36778899999876
No 348
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=3.7e-14 Score=130.80 Aligned_cols=106 Identities=17% Similarity=0.262 Sum_probs=92.2
Q ss_pred CCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCC
Q 007286 92 LSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDS 171 (609)
Q Consensus 92 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 171 (609)
-+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999998 8888775 8999999999999988899999999999999999999965556678999999999999
Q ss_pred CcccccCCccc---ccCCcccCCCCCCCCCCC
Q 007286 172 NNLSGQIPVHL---FQIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 172 N~l~~~ip~~l---~~l~~l~~~~n~~~c~~~ 200 (609)
|+|++..+..| .+|..|++++|++.|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99995444434 567778999999998764
No 349
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.49 E-value=1.4e-14 Score=132.77 Aligned_cols=114 Identities=21% Similarity=0.208 Sum_probs=100.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccC-CccccCcccchhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKI-PPSLGNLKKLQFL 143 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L 143 (609)
..+|+.|+|++|.+++. ..+..+++|++|+|++|+|++.+|..+.++++|++|+|++|+|++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 35899999999999976 78999999999999999999888988888999999999999999532 2789999999999
Q ss_pred hccCCcCCCCcC---CCcCcccccccccCCCCcccccCCcc
Q 007286 144 TLSQNNFSGTIP---DSLTTLSSLISIQLDSNNLSGQIPVH 181 (609)
Q Consensus 144 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~ip~~ 181 (609)
+|++|.+++..+ ..+..+++|++|++++|.+. .+|..
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 999999994433 37899999999999999998 67753
No 350
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.48 E-value=1.8e-14 Score=148.79 Aligned_cols=130 Identities=22% Similarity=0.244 Sum_probs=112.9
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCc--cccCcccchh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP--SLGNLKKLQF 142 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~ 142 (609)
..+|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++ .+|. .|.++++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 458999999999999988899999999999999999999555555999999999999999999 5665 7999999999
Q ss_pred hhccCCc-CCCCcCCCcCcccccccccCCCCcccccCCccccc---CCcccCCCCCC
Q 007286 143 LTLSQNN-FSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQ---IPKYNFTGNNL 195 (609)
Q Consensus 143 L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~---l~~l~~~~n~~ 195 (609)
|+|++|+ +++..|..+.++++|+.|++++|.+++..|..+.+ |..|++++|..
T Consensus 154 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 154 LRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred EECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 9999994 77555778999999999999999999888877654 45577887764
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.48 E-value=9.4e-15 Score=159.19 Aligned_cols=127 Identities=23% Similarity=0.209 Sum_probs=112.1
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|+|++|.+++..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999888889999999999999999999888999999999999999999999 67766 8999999999
Q ss_pred cCCcCCC-CcCCCcCcccccccccCCCCcccccCCcccccC--CcccCCCCCC
Q 007286 146 SQNNFSG-TIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI--PKYNFTGNNL 195 (609)
Q Consensus 146 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l--~~l~~~~n~~ 195 (609)
++|++++ .+|..+.++++|++|++++|.+++.....+.++ ..|++++|..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccc
Confidence 9999996 478899999999999999999987544556666 7788888876
No 352
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.47 E-value=3e-14 Score=138.66 Aligned_cols=127 Identities=16% Similarity=0.194 Sum_probs=108.6
Q ss_pred CCCeEEEEecCCC-cccccCccccCCCCCCEEEccC-CCcCCCCCccccccccccccccccccccccCCccccCcccch-
Q 007286 65 SNNVASVTLSSMN-FSGTLSPRIGVLRTLSTLTLKG-NGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQ- 141 (609)
Q Consensus 65 ~~~l~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~- 141 (609)
..+|+.|+|++|. +++..+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3589999999997 8877777899999999999998 99996667789999999999999999995 776 88888888
Q ss_pred --hhhccCC-cCCCCcCCCcCcccccc-cccCCCCcccccCCccc---ccCCcccCCCCC
Q 007286 142 --FLTLSQN-NFSGTIPDSLTTLSSLI-SIQLDSNNLSGQIPVHL---FQIPKYNFTGNN 194 (609)
Q Consensus 142 --~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~ 194 (609)
.|+|++| ++++..+..|..+++|+ .|++++|+++ .+|... .++..|++++|+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99855556789999999 9999999998 677543 356778888885
No 353
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.46 E-value=1.6e-13 Score=140.40 Aligned_cols=125 Identities=20% Similarity=0.290 Sum_probs=60.5
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcC--CCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGIT--GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
+|+.|+|++|.+++..+..|..+++|+.|+|++|.++ +..|..+..+ +|++|+|++|+++ .+|..+. ++|+.|+
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~-~l~~~~~--~~L~~L~ 199 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT-GIPKDLP--ETLNELH 199 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS-SCCSSSC--SSCSCCB
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC-ccCcccc--CCCCEEE
Confidence 4455555555555444444566666666666666664 2444444444 3333333333333 1222221 3455555
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNL 195 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~ 195 (609)
|++|++++..|..+..+++|+.|+|++|++++..|..+ .+|..|++++|..
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 253 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcC
Confidence 55555554444555555555555555555554333333 2334445555543
No 354
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.45 E-value=2.1e-14 Score=154.87 Aligned_cols=34 Identities=21% Similarity=0.088 Sum_probs=26.8
Q ss_pred CchHHHHHHHHHHHHhccCCCcceeeeEeeCCCc
Q 007286 322 PGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTE 355 (609)
Q Consensus 322 ~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 355 (609)
....++|..|++++.+++|+|+|+++|||.+...
T Consensus 320 ~~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~~ 353 (487)
T 3oja_A 320 GQGSETERLECERENQARQREIDALKEQYRTVID 353 (487)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred cccHHHHHHHHHHHhcccccchhhHHHHhcChHH
Confidence 3456789999999999999999999999977653
No 355
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.45 E-value=3.9e-14 Score=155.30 Aligned_cols=130 Identities=22% Similarity=0.209 Sum_probs=111.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccc-cCCccccCcccchhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVG-KIPPSLGNLKKLQFL 143 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L 143 (609)
..+|++|+|++|.+++..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|++++ .+|..|+++++|+.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 4589999999999999988999999999999999999998777779999999999999999986 467789999999999
Q ss_pred hccCCcCCCCcC-CCcCcccccccccCCCCcccccCCcccccC---CcccCCCCC
Q 007286 144 TLSQNNFSGTIP-DSLTTLSSLISIQLDSNNLSGQIPVHLFQI---PKYNFTGNN 194 (609)
Q Consensus 144 ~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l---~~l~~~~n~ 194 (609)
+|++|++.+.+| ..+.++++|++|++++|.+++.+|..+.++ ..|++.+|.
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 183 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSE 183 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSB
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCc
Confidence 999999655776 579999999999999999998888765443 334555443
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.43 E-value=1.3e-13 Score=138.37 Aligned_cols=124 Identities=25% Similarity=0.401 Sum_probs=99.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++..+ +..+++|+.|+|++|+|++ +|. +.++++|++|+|++|+|++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 3589999999999986554 8889999999999999984 554 8889999999999999985 4 4688899999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~ 196 (609)
|++|++++. ..+..+++|+.|++++|++++..| ..+.+|..|++++|...
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCC
Confidence 999999854 568888999999999999986544 23456677888888654
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.42 E-value=1.2e-13 Score=136.50 Aligned_cols=100 Identities=29% Similarity=0.397 Sum_probs=47.1
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+|+.|+|++|.+++..+ +..+++|+.|+|++|+|++ +|. +.. ++|+.|+|++|+|++ +| .+.++++|+.|+|+
T Consensus 64 ~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECT
T ss_pred CCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECC
Confidence 45555555555553322 4455555555555555542 332 111 455555555555552 22 34455555555555
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCccc
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 175 (609)
+|+|+ .+| .+..+++|+.|+|++|+++
T Consensus 137 ~N~i~-~~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 137 NNKLK-SIV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp TSCCC-BCG-GGGGCTTCCEEECTTSCCC
T ss_pred CCcCC-CCh-HHccCCCCCEEECCCCcCc
Confidence 55554 223 3444555555555555554
No 358
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.42 E-value=3e-14 Score=127.76 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=93.9
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccccc-CCccccCcccchhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGK-IPPSLGNLKKLQFL 143 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 143 (609)
..+++.|+|++|.+++. ..+..+++|++|+|++|.|++.+|..+.++++|++|+|++|++++. .|..++.+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 46899999999999976 7899999999999999999987999888899999999999999963 34889999999999
Q ss_pred hccCCcCCCCcC---CCcCcccccccccCCC
Q 007286 144 TLSQNNFSGTIP---DSLTTLSSLISIQLDS 171 (609)
Q Consensus 144 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 171 (609)
++++|++++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999995444 3788999999999874
No 359
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.42 E-value=9.8e-14 Score=140.44 Aligned_cols=127 Identities=28% Similarity=0.432 Sum_probs=106.3
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
...+|+.|+|++|.+++. + .+..+++|+.|+|++|+|++ +|. +..+++|++|+|++|++++. +. +..+++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L 156 (308)
T 1h6u_A 83 NLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYL 156 (308)
T ss_dssp TCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEE
T ss_pred cCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEE
Confidence 346899999999999964 3 68999999999999999995 554 99999999999999999954 43 8999999999
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNCG 198 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~c~ 198 (609)
+|++|++++ +|. +..+++|+.|++++|.+++..| ..+.+|..|++++|+....
T Consensus 157 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 157 SIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBC
T ss_pred EccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcc
Confidence 999999995 444 8899999999999999995443 3456777889999986543
No 360
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=1.2e-13 Score=142.17 Aligned_cols=106 Identities=22% Similarity=0.277 Sum_probs=94.1
Q ss_pred CEEEccCC-CcCCCCCcccccccccccccccc-ccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCC
Q 007286 93 STLTLKGN-GITGEIPEELGNLSSLTSLDLDN-NRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 170 (609)
Q Consensus 93 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 170 (609)
..+++++| +|+ .+|. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 899 6898 99999999999996 99998777899999999999999999998888899999999999999
Q ss_pred CCcccccCCcccc--cCCcccCCCCCCCCCCC
Q 007286 171 SNNLSGQIPVHLF--QIPKYNFTGNNLNCGKT 200 (609)
Q Consensus 171 ~N~l~~~ip~~l~--~l~~l~~~~n~~~c~~~ 200 (609)
+|+|++..|..+. .|..|++.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999954444443 37889999999999875
No 361
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.41 E-value=3.3e-13 Score=133.29 Aligned_cols=124 Identities=23% Similarity=0.325 Sum_probs=104.7
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|+++ .++ .+..+++|+.|+|++|+|++ +|. +.++++|++|+|++|+|++ +|... . ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 358999999999999 455 78999999999999999995 444 9999999999999999995 55433 3 9999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC--cccccCCcccCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLNCG 198 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip--~~l~~l~~l~~~~n~~~c~ 198 (609)
|++|++++ +| .+..+++|+.|+|++|++++ +| ..+.+|..|++++|+....
T Consensus 113 L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IVMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CGGGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCC-Ch-hhcCcccccEEECCCCcCCC-ChHHccCCCCCEEECCCCcCcch
Confidence 99999994 55 58999999999999999995 55 2456777889999987544
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.41 E-value=1.9e-13 Score=137.15 Aligned_cols=125 Identities=30% Similarity=0.409 Sum_probs=107.1
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
...+|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 161 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (291)
T ss_dssp TCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE
Confidence 34689999999999996 33 49999999999999999995 4 4699999999999999999954 689999999999
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCcccccCCc--ccccCCcccCCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~c 197 (609)
+|++|++++..| +..+++|+.|++++|.+++ +|. .+.+|..|++++|+..+
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEEC
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccC
Confidence 999999996555 8999999999999999994 663 34567778899887543
No 363
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.40 E-value=1e-15 Score=144.49 Aligned_cols=86 Identities=23% Similarity=0.332 Sum_probs=41.7
Q ss_pred cccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCccccc
Q 007286 85 RIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSL 164 (609)
Q Consensus 85 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 164 (609)
.+..+++|++|+|++|.|++ +| .+.++++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 44445555555555555542 44 4444555555555555554 344444444555555555555542 33 34444455
Q ss_pred ccccCCCCccc
Q 007286 165 ISIQLDSNNLS 175 (609)
Q Consensus 165 ~~L~l~~N~l~ 175 (609)
++|++++|+++
T Consensus 118 ~~L~l~~N~i~ 128 (198)
T 1ds9_A 118 RVLYMSNNKIT 128 (198)
T ss_dssp SEEEESEEECC
T ss_pred CEEECCCCcCC
Confidence 55555555554
No 364
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=5.5e-14 Score=129.94 Aligned_cols=106 Identities=23% Similarity=0.284 Sum_probs=95.9
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCc--cccCcccchhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPP--SLGNLKKLQFL 143 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L 143 (609)
.+|+.|+|++|.|++. +.+..+++|++|+|++|+|++..|..+..+++|++|+|++|+|+ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999976 68999999999999999999654455699999999999999997 6776 89999999999
Q ss_pred hccCCcCCCCcCCC----cCcccccccccCCCCccc
Q 007286 144 TLSQNNFSGTIPDS----LTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 144 ~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 175 (609)
+|++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999 77875 889999999999999986
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.40 E-value=3.7e-13 Score=136.21 Aligned_cols=125 Identities=23% Similarity=0.425 Sum_probs=106.4
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++..+ +..+++|++|+|++|+|++ +| .+..+++|++|+|++|++++ +|. +..+++|+.|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEE
Confidence 4689999999999996554 9999999999999999995 55 69999999999999999995 553 99999999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~c 197 (609)
|++|++++..+ +..+++|++|++++|.+++..+ ..+.+|..|++++|....
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISD 187 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCc
Confidence 99999995443 8899999999999999995333 344577788999987654
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.38 E-value=2.6e-13 Score=139.61 Aligned_cols=124 Identities=25% Similarity=0.360 Sum_probs=69.6
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+++.|++++|.+.+..+ +..+++|++|+|++|++++ +|. +..+++|++|+|++|++++ + +.+..+++|+.|+|
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l 272 (347)
T 4fmz_A 199 TSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNV 272 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEEC
T ss_pred CccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEc
Confidence 356666666666664433 5556666666666666663 332 5566666666666666653 2 34556666666666
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCccc---ccCCcccCCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHL---FQIPKYNFTGNNLNC 197 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l---~~l~~l~~~~n~~~c 197 (609)
++|++++ +| .+..+++|+.|++++|++++..|..+ .+|..|++++|+...
T Consensus 273 ~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 273 GSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred cCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 6666653 32 35556666666666666655444332 344445566665443
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.38 E-value=4.4e-13 Score=147.68 Aligned_cols=124 Identities=26% Similarity=0.399 Sum_probs=84.1
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.|++..| +..+++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++ + +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEE
Confidence 3577888888888776544 7777777777777777773 44 57777777777777777774 3 3467777777777
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~ 196 (609)
|++|+|++. ..+..+++|+.|+|++|.|++..| ..+.+|..|++++|...
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCC
Confidence 777777743 456677777777777777775544 22345555666666543
No 368
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.36 E-value=1.8e-13 Score=139.12 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=106.9
Q ss_pred CCCeEEEEecCCCcccccCcccc-CCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
..+|+.|+|++|.+++..+..+. .+++|++|+|++|+|++. |. ...+++|++|+|++|+|+ .+|..|..+++|+.|
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L 219 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWI 219 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC-cchhhhcccCcccEE
Confidence 35899999999999988887774 799999999999999954 44 445999999999999999 566679999999999
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCccc-ccCCcccccCC---cccCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLS-GQIPVHLFQIP---KYNFTGN 193 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~ip~~l~~l~---~l~~~~n 193 (609)
+|++|+|+ .+|..+..+++|+.|++++|+++ +.+|..+..++ .+++.+|
T Consensus 220 ~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~ 272 (317)
T 3o53_A 220 SLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (317)
T ss_dssp ECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCc
Confidence 99999999 78999999999999999999999 77776665554 4555544
No 369
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.36 E-value=1.5e-13 Score=151.57 Aligned_cols=138 Identities=20% Similarity=0.290 Sum_probs=97.8
Q ss_pred CCcCCCCCCCCCCCCcceeEEcC-------CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccc
Q 007286 42 NQLRDWNQNQVNPCTWSNVICDN-------SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLS 114 (609)
Q Consensus 42 ~~l~~w~~~~~~~c~w~gv~c~~-------~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 114 (609)
..+++|.. ..+||.|+|..|.. ..+++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .++
T Consensus 10 ~~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 34567765 34788886643211 135888888888888 6676664 78888888888888 6666 567
Q ss_pred cccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCC
Q 007286 115 SLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNN 194 (609)
Q Consensus 115 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~ 194 (609)
+|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|. .+++|+.|++++|+|+ .+|..+.+|..|++++|.
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~-~lp~~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLT-SLPVLPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCC-cCCCCCCCCCEEECcCCc
Confidence 8888888888888 5665 6678888888888887 4555 4566777777777777 466666777777777775
Q ss_pred CC
Q 007286 195 LN 196 (609)
Q Consensus 195 ~~ 196 (609)
..
T Consensus 153 l~ 154 (622)
T 3g06_A 153 LA 154 (622)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 370
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.35 E-value=7.2e-13 Score=146.02 Aligned_cols=125 Identities=30% Similarity=0.407 Sum_probs=108.2
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
...+|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ +| .+..|++|+.|+|++|+|++. ..|..|++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 34689999999999996 33 79999999999999999995 44 599999999999999999964 689999999999
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCcccccCCc--ccccCCcccCCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~c 197 (609)
+|++|+|++..| +..+++|+.|+|++|+|++ +|. .+.+|..|++++|+...
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEEEEC
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCcCcC
Confidence 999999997766 8999999999999999995 552 45677778899987643
No 371
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.35 E-value=8.7e-13 Score=135.99 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=110.3
Q ss_pred CCcceeEEcCC----------CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCc-cccccccccc-cccc
Q 007286 55 CTWSNVICDNS----------NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPE-ELGNLSSLTS-LDLD 122 (609)
Q Consensus 55 c~w~gv~c~~~----------~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~L~ 122 (609)
|+|..|.|++. .+++.|+|++|+|+.+.+..|.+|++|++|+|++|++.+.+|. .|.+|++|+. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 68999999752 3789999999999966667899999999999999998777764 5788888765 6777
Q ss_pred cccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCCC-CcccccCC-cccc----cCCcccCCCCCCC
Q 007286 123 NNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDS-NNLSGQIP-VHLF----QIPKYNFTGNNLN 196 (609)
Q Consensus 123 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~ip-~~l~----~l~~l~~~~n~~~ 196 (609)
+|+|+...|..|.++++|+.|++++|+|++..+..+....++..|++.+ |++. .+| ..+. .+..|++++|...
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc
Confidence 8999977788899999999999999999966566666777788888865 5666 455 3343 3445777777653
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.34 E-value=1.1e-12 Score=143.07 Aligned_cols=116 Identities=22% Similarity=0.334 Sum_probs=83.5
Q ss_pred CCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhh
Q 007286 64 NSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFL 143 (609)
Q Consensus 64 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 143 (609)
...+|+.|+|++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|
T Consensus 98 ~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L 165 (571)
T 3cvr_A 98 LPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVL 165 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred ccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEE
Confidence 34678888888888886 666 554 88888888888885 666 57788888888888884 665 56778888
Q ss_pred hccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccC-------CcccCCCCCCC
Q 007286 144 TLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQI-------PKYNFTGNNLN 196 (609)
Q Consensus 144 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l-------~~l~~~~n~~~ 196 (609)
+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|....+| ..|++++|...
T Consensus 166 ~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 166 SVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp ECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCC
T ss_pred ECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcce
Confidence 888888874 666 54 77777777777777 566622355 66777777655
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.33 E-value=1.6e-13 Score=150.29 Aligned_cols=103 Identities=29% Similarity=0.406 Sum_probs=92.6
Q ss_pred CCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCCcCcccccccccCC
Q 007286 91 TLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 170 (609)
Q Consensus 91 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 170 (609)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58999999999995 787 999999999999999999 899999999999999999999995 78 89999999999999
Q ss_pred CCcccccC-Ccccc---cCCcccCCCCCCCCC
Q 007286 171 SNNLSGQI-PVHLF---QIPKYNFTGNNLNCG 198 (609)
Q Consensus 171 ~N~l~~~i-p~~l~---~l~~l~~~~n~~~c~ 198 (609)
+|+|++.+ |..+. +|..|++++|+....
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 99999776 87665 556688999986543
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.33 E-value=1e-12 Score=141.11 Aligned_cols=122 Identities=30% Similarity=0.442 Sum_probs=75.2
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.+++..+ +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| ++.+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467777777777775544 6667777777777777764333 6666677777777777664333 666666666666
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCC--cccccCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip--~~l~~l~~l~~~~n~~~ 196 (609)
++|++++..| +..+++|+.|++++|++++. + ..+.+|..|++++|+..
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccC
Confidence 6666665544 55666666666666666643 3 12334455556665543
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.32 E-value=9.3e-15 Score=137.93 Aligned_cols=110 Identities=23% Similarity=0.290 Sum_probs=99.4
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++ +| .+..+++|+.|+|++|.|+ .+|..+..+++|++|+|++|+|++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4589999999999997 66 8999999999999999999 789888889999999999999995 56 699999999999
Q ss_pred ccCCcCCCCcC--CCcCcccccccccCCCCcccccCCc
Q 007286 145 LSQNNFSGTIP--DSLTTLSSLISIQLDSNNLSGQIPV 180 (609)
Q Consensus 145 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~ip~ 180 (609)
|++|+++ .+| ..+..+++|++|++++|++++.+|.
T Consensus 122 l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCC-chhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999999 444 4788999999999999999987765
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.31 E-value=2.7e-12 Score=137.10 Aligned_cols=123 Identities=23% Similarity=0.258 Sum_probs=99.1
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|++++ +| +..+++|+.|+|++|+|++. .++.+++|++|+|++|+|++ +| ++.+++|+.|+
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 4579999999999997 44 78889999999999999864 38888999999999999996 66 88899999999
Q ss_pred ccCCcCCCCcCCCcCccc-------ccccccCCCCcccccCCc-ccccCCcccCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLS-------SLISIQLDSNNLSGQIPV-HLFQIPKYNFTGNNLN 196 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~-------~L~~L~l~~N~l~~~ip~-~l~~l~~l~~~~n~~~ 196 (609)
|++|++++..+..+.++. +|+.|++++|.+.|.+|. .+.+|..|++++|+..
T Consensus 240 l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l 299 (457)
T 3bz5_A 240 CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQL 299 (457)
T ss_dssp CCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTC
T ss_pred eeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCccc
Confidence 999999976655666555 567788888888777773 4567788888888754
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.29 E-value=5.6e-12 Score=134.65 Aligned_cols=128 Identities=18% Similarity=0.205 Sum_probs=90.6
Q ss_pred ceeEEcCCCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCc
Q 007286 58 SNVICDNSNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNL 137 (609)
Q Consensus 58 ~gv~c~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 137 (609)
.++.-....+|+.|+|++|++++. + ++.+++|++|++++|+..+.+ .+..+++|++|+|++|+|++ +| ++.+
T Consensus 119 ~~l~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l 190 (457)
T 3bz5_A 119 TKLDVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQN 190 (457)
T ss_dssp SCCCCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTC
T ss_pred CeecCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccC
Confidence 333333445788899999888874 2 777888888888888655566 37777888888888888875 55 7777
Q ss_pred ccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCCC
Q 007286 138 KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNC 197 (609)
Q Consensus 138 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~c 197 (609)
++|+.|++++|++++. .+..+++|+.|++++|++++ +| ..+.+|..|++++|+...
T Consensus 191 ~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 191 KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-IDVTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CCCTTCTTCSEEECCSSCCSC
T ss_pred CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cCccccCCCCEEEeeCCcCCC
Confidence 7788888888887743 36777777788888887775 55 334556667777776543
No 378
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.28 E-value=3.4e-13 Score=143.97 Aligned_cols=122 Identities=25% Similarity=0.310 Sum_probs=71.0
Q ss_pred CeEEEEecCCCcccccCccccCCCCC-------------CEEEccCCCcCCCCCccccccccccccccccccccccCCcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTL-------------STLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPS 133 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 133 (609)
+++.|+|++|.+.|.+|..++++++| +.|++++|.+++ +|.. .++|++|+|++|++++ +|..
T Consensus 35 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~ 109 (454)
T 1jl5_A 35 SKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL 109 (454)
T ss_dssp CHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC
T ss_pred chhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc
Confidence 45555555555555555555555443 555555555553 3321 1355666666666664 4433
Q ss_pred ccC----------------c-ccchhhhccCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCCC
Q 007286 134 LGN----------------L-KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNLN 196 (609)
Q Consensus 134 ~~~----------------l-~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~~ 196 (609)
+.+ + ++|++|+|++|++++ +| .+.++++|++|++++|++++ +|..+.+++.|++++|...
T Consensus 110 ~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L~~n~l~ 186 (454)
T 1jl5_A 110 PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQLE 186 (454)
T ss_dssp CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS
T ss_pred cCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCcccccEEECcCCcCC
Confidence 211 1 356666667777663 66 46777777777777777773 6666667777777776544
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.27 E-value=4.3e-12 Score=136.16 Aligned_cols=126 Identities=27% Similarity=0.403 Sum_probs=103.6
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
..+|+.|+|++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 35799999999998864 468889999999999999986554 8889999999999999995444 88899999999
Q ss_pred ccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccccCCcccCCCCCCCCC
Q 007286 145 LSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNNLNCG 198 (609)
Q Consensus 145 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~~~c~ 198 (609)
|++|++++..| +..+++|+.|++++|++++..| ..+.+|..|++++|+....
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 99999996544 7889999999999999997666 3456777888988876543
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.27 E-value=7.6e-12 Score=133.53 Aligned_cols=118 Identities=24% Similarity=0.286 Sum_probs=75.4
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .|+++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 366777777777775 55 47777777777777777773 55433 367777777777774 55 5777777777777
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCc--ccccCCcccCCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPV--HLFQIPKYNFTGNNLN 196 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~--~l~~l~~l~~~~n~~~ 196 (609)
++|++++ +|... ++|++|++++|.++ .+|. .+.++..|++++|...
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCC
Confidence 7777773 44432 35666666666666 5663 2334555667776554
No 381
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=2.5e-11 Score=119.54 Aligned_cols=146 Identities=12% Similarity=0.068 Sum_probs=113.1
Q ss_pred HHhcCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCCcceeeeEeeCCCcceEE
Q 007286 281 LATDNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLV 359 (609)
Q Consensus 281 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 359 (609)
.....|.....++.|+.+.||++... |+.+++|+...... .....+.+|+++++.+. |..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 33456877788888999999999864 78999999864211 12345889999999885 67788899999888889999
Q ss_pred eecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhc-----------------------------------
Q 007286 360 YPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH----------------------------------- 404 (609)
Q Consensus 360 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~----------------------------------- 404 (609)
|||++|.++...+.. ......++.+++++|..||+.
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999998775321 112346788999999999981
Q ss_pred ---------------------CCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 405 ---------------------CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 405 ---------------------~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
..+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013689999999999998766677999998763
No 382
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=1.4e-13 Score=140.87 Aligned_cols=128 Identities=22% Similarity=0.236 Sum_probs=87.9
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCC-CCccccccccccccccccccccccCCccccCcccchhhh
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGE-IPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLT 144 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 144 (609)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..|+.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677777777777765554 45677777777777777655 666677777777777777777777777777777777777
Q ss_pred ccCC-cCCCC-cCCCcCcccccccccCCCC-ccccc-CCc---ccc-cCCcccCCCCC
Q 007286 145 LSQN-NFSGT-IPDSLTTLSSLISIQLDSN-NLSGQ-IPV---HLF-QIPKYNFTGNN 194 (609)
Q Consensus 145 l~~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-ip~---~l~-~l~~l~~~~n~ 194 (609)
|++| .+++. +|..+..+++|++|++++| .+++. +|. .+. +|..|++++|.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 7777 56642 5555667777777777777 77643 343 234 56666777664
No 383
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.24 E-value=6.8e-12 Score=128.96 Aligned_cols=121 Identities=28% Similarity=0.453 Sum_probs=71.6
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEEC
Confidence 356666666666664332 5666666666666666663333 6666666666666666663 332 666666666666
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCC--cccccCCcccCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP--VHLFQIPKYNFTGNNL 195 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip--~~l~~l~~l~~~~n~~ 195 (609)
++|.+++ + ..+..+++|++|++++|++++ +| ..+.++..|++++|+.
T Consensus 251 ~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 251 GTNQISD-I-NAVKDLTKLKMLNVGSNQISD-ISVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp CSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCC
T ss_pred CCCccCC-C-hhHhcCCCcCEEEccCCccCC-ChhhcCCCCCCEEECcCCcC
Confidence 6666663 3 245666666666666666663 33 2334555566666654
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.24 E-value=2.5e-13 Score=142.09 Aligned_cols=129 Identities=21% Similarity=0.303 Sum_probs=63.3
Q ss_pred CeEEEEecCCCcc-cccC---ccccCCCCCCEEEccCCCcC--C---CCCcccccccccccccccccccc----ccCCcc
Q 007286 67 NVASVTLSSMNFS-GTLS---PRIGVLRTLSTLTLKGNGIT--G---EIPEELGNLSSLTSLDLDNNRLV----GKIPPS 133 (609)
Q Consensus 67 ~l~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~ 133 (609)
+|+.|+|++|+++ +.++ ..+..+++|++|+|++|+|+ | .+|..+.++++|+.|+|++|+|+ +.+|..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~ 239 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHH
Confidence 4455555555544 2222 23444555555555555554 1 23334555555555555555553 345555
Q ss_pred ccCcccchhhhccCCcCCCC----cCCCc--CcccccccccCCCCcccc----cCCccc----ccCCcccCCCCCC
Q 007286 134 LGNLKKLQFLTLSQNNFSGT----IPDSL--TTLSSLISIQLDSNNLSG----QIPVHL----FQIPKYNFTGNNL 195 (609)
Q Consensus 134 ~~~l~~L~~L~l~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~ip~~l----~~l~~l~~~~n~~ 195 (609)
+..+++|+.|+|++|+|++. +|..+ ..+++|++|+|++|.+++ .+|..+ .+|..|++++|+.
T Consensus 240 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 55555555555555555533 33333 225555555555555554 244332 3444555555543
No 385
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.20 E-value=5e-11 Score=117.06 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=100.3
Q ss_pred CCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc--ceeeeEeeCCCcceEEeecc
Q 007286 286 FSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL--LRLIGFCTTPTERLLVYPFM 363 (609)
Q Consensus 286 ~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~~~~lv~e~~ 363 (609)
+....+.+.|..+.||++...+|..+++|..... ....+..|+++++.+.+.++ .+++++....+..++||||+
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 3333333456669999998877889999987542 22457889999998876554 45888888777889999999
Q ss_pred cCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 007286 364 QNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC-------------------------------------- 405 (609)
Q Consensus 364 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 405 (609)
+|.++. ... . ....++.++++.|..||+..
T Consensus 98 ~G~~l~--~~~-------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 98 PGQDLL--SSH-------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SSEETT--TSC-------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCcccC--cCc-------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 998884 211 1 12356777888888888641
Q ss_pred -----------------CCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 406 -----------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 406 -----------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
.+.++|+|++|.||+++++..+.|+|||.+..
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999999864
No 386
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.20 E-value=9.8e-13 Score=136.29 Aligned_cols=129 Identities=27% Similarity=0.348 Sum_probs=77.7
Q ss_pred CeEEEEecCCCcccccC----ccccCCC-CCCEEEccCCCcCCCCCcccccc-----ccccccccccccccccCCccccC
Q 007286 67 NVASVTLSSMNFSGTLS----PRIGVLR-TLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGKIPPSLGN 136 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 136 (609)
+|+.|+|++|.+++..+ ..+..++ +|++|+|++|+|++..+..+..+ ++|++|+|++|+|++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47777777777765555 5566666 67777777777776656666654 67777777777776555543333
Q ss_pred ----c-ccchhhhccCCcCCCCcCCCcC----c-ccccccccCCCCcccccCCccc--------ccCCcccCCCCCC
Q 007286 137 ----L-KKLQFLTLSQNNFSGTIPDSLT----T-LSSLISIQLDSNNLSGQIPVHL--------FQIPKYNFTGNNL 195 (609)
Q Consensus 137 ----l-~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~ip~~l--------~~l~~l~~~~n~~ 195 (609)
+ ++|+.|+|++|+|++..+..+. . .++|++|+|++|.+++..+..+ .++..|++++|..
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCC
Confidence 3 6677777777777644333322 2 2467777777777764332221 2566666666654
No 387
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.19 E-value=6.5e-13 Score=135.95 Aligned_cols=130 Identities=18% Similarity=0.268 Sum_probs=103.7
Q ss_pred CCeEEEEecCCCcccc-cCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc-ccccc-CCccccCcccchh
Q 007286 66 NNVASVTLSSMNFSGT-LSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN-RLVGK-IPPSLGNLKKLQF 142 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~ 142 (609)
.+|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++. +|..+.++++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 5789999999988866 7778888999999999999988888888888999999999998 67753 6777888889999
Q ss_pred hhccCC-cCCCC-cCCCcCccc-ccccccCCCC--ccc-ccCCc---ccccCCcccCCCCCC
Q 007286 143 LTLSQN-NFSGT-IPDSLTTLS-SLISIQLDSN--NLS-GQIPV---HLFQIPKYNFTGNNL 195 (609)
Q Consensus 143 L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~ip~---~l~~l~~l~~~~n~~ 195 (609)
|+|++| .+++. +|..+..++ +|++|++++| .++ +.+|. .+.+|..|++++|..
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 999988 88754 566677888 8888888888 454 34554 345677788888873
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.17 E-value=3.7e-11 Score=132.59 Aligned_cols=113 Identities=22% Similarity=0.324 Sum_probs=69.1
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTL 145 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 145 (609)
.+|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEEC
Confidence 36777777777777 4444 4677777777777777 4555 5567777777777777 3444 4556666666
Q ss_pred cCCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcccCCCCCC
Q 007286 146 SQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKYNFTGNNL 195 (609)
Q Consensus 146 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l~~~~n~~ 195 (609)
++|+|+ .+|.. +++|++|+|++|+++ .+|..+.++..|++++|..
T Consensus 129 ~~N~l~-~lp~~---l~~L~~L~Ls~N~l~-~l~~~~~~L~~L~L~~N~l 173 (622)
T 3g06_A 129 FGNQLT-SLPVL---PPGLQELSVSDNQLA-SLPALPSELCKLWAYNNQL 173 (622)
T ss_dssp CSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCC
T ss_pred CCCCCC-cCCCC---CCCCCEEECcCCcCC-CcCCccCCCCEEECCCCCC
Confidence 666666 35543 255666666666665 3454445555555555443
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.17 E-value=7.1e-13 Score=138.60 Aligned_cols=131 Identities=21% Similarity=0.316 Sum_probs=89.4
Q ss_pred CCCeEEEEecCCCccc----ccCccccCCCCCCEEEccCCCcCCCCCcccc----cc---------cccccccccccccc
Q 007286 65 SNNVASVTLSSMNFSG----TLSPRIGVLRTLSTLTLKGNGITGEIPEELG----NL---------SSLTSLDLDNNRLV 127 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~ 127 (609)
..+|+.|+|++|.+++ .+|..+..+++|++|+|++|.|++..+..+. .+ ++|++|+|++|+|+
T Consensus 93 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp CTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 3578888888888876 4666777788888888888887644333333 33 77888888888776
Q ss_pred -ccCC---ccccCcccchhhhccCCcCC--C---CcCCCcCcccccccccCCCCccc----ccCCccc---ccCCcccCC
Q 007286 128 -GKIP---PSLGNLKKLQFLTLSQNNFS--G---TIPDSLTTLSSLISIQLDSNNLS----GQIPVHL---FQIPKYNFT 191 (609)
Q Consensus 128 -~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~ip~~l---~~l~~l~~~ 191 (609)
+.+| ..|..+++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.++ +.+|..+ .+|..|+++
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 4444 35667777888888888776 2 34556777777788888887775 4566443 355566777
Q ss_pred CCCC
Q 007286 192 GNNL 195 (609)
Q Consensus 192 ~n~~ 195 (609)
+|..
T Consensus 253 ~n~i 256 (386)
T 2ca6_A 253 DCLL 256 (386)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 7764
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.16 E-value=2e-12 Score=133.89 Aligned_cols=127 Identities=24% Similarity=0.250 Sum_probs=107.7
Q ss_pred EEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCC----ccccccc-cccccccccccccccCCccccCc-----cc
Q 007286 70 SVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIP----EELGNLS-SLTSLDLDNNRLVGKIPPSLGNL-----KK 139 (609)
Q Consensus 70 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 139 (609)
.++|+.|+++|.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999997666 6788888 99999999999998878888776 99
Q ss_pred chhhhccCCcCCCCcCCCcCcc-----cccccccCCCCcccccCCccc--------ccCCcccCCCCCCC
Q 007286 140 LQFLTLSQNNFSGTIPDSLTTL-----SSLISIQLDSNNLSGQIPVHL--------FQIPKYNFTGNNLN 196 (609)
Q Consensus 140 L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~ip~~l--------~~l~~l~~~~n~~~ 196 (609)
|+.|+|++|++++..+..+... ++|++|+|++|.+++..+..+ .+|+.|++++|...
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 9999999999997666654443 899999999999986555332 37888999998754
No 391
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.09 E-value=4.5e-10 Score=116.02 Aligned_cols=144 Identities=14% Similarity=0.184 Sum_probs=106.4
Q ss_pred ccCcccccCCceEEEEEeCCCcEEEEEEec--cCCCCchHHHHHHHHHHHHhcc--CCCcceeeeEeeCC---CcceEEe
Q 007286 288 EKNVLGQGGFGKVYRGVLADGTKVAVKRLT--DFESPGGDAAFQREVEMISVAV--HRNLLRLIGFCTTP---TERLLVY 360 (609)
Q Consensus 288 ~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ 360 (609)
..+.|+.|.++.||+.... +..+++|+.. ..........+.+|+++++.+. +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 3567899999999999875 4688888775 3222223457888999999887 45578888888766 4488999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC----------------------------------- 405 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 405 (609)
||++|..+.+... ..++...+..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 9999977643211 12567788889999999999999731
Q ss_pred --------------------CCCeEecCCCCCcEEeCCCCc--EEEcccccceee
Q 007286 406 --------------------NPKIIHRDVKAANVLLDEDFE--AVVGDFGLAKLV 438 (609)
Q Consensus 406 --------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DfGla~~~ 438 (609)
.+.++|+|+++.||+++.++. +.|+||+.+..-
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999997753 689999998753
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.00 E-value=4.5e-10 Score=115.60 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=75.5
Q ss_pred eEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccc--------------------------cccccc
Q 007286 68 VASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSS--------------------------LTSLDL 121 (609)
Q Consensus 68 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--------------------------L~~L~L 121 (609)
++.+.+++|+|++..|..|..+++|++|++++|+|++..+..+....+ |+.|+|
T Consensus 82 ~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L 161 (350)
T 4ay9_X 82 HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWL 161 (350)
T ss_dssp CEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEEC
T ss_pred hhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcc
Confidence 445677788888777888888888888888888887544433333333 455566
Q ss_pred ccccccccCCccccCcccchhhhccC-CcCCCCcC-CCcCcccccccccCCCCcccccCC-cccccCCcccCCCCC
Q 007286 122 DNNRLVGKIPPSLGNLKKLQFLTLSQ-NNFSGTIP-DSLTTLSSLISIQLDSNNLSGQIP-VHLFQIPKYNFTGNN 194 (609)
Q Consensus 122 ~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~ip-~~l~~l~~l~~~~n~ 194 (609)
++|+|+ .+|.......+|+.|++++ |.++ .+| +.|..+++|++|+|++|+|+ .+| ..+.++++|...++.
T Consensus 162 ~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 162 NKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp CSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCT
T ss_pred cccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCC
Confidence 666665 3444444455566666653 4444 444 34566666666666666666 344 345566666555443
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.99 E-value=8.9e-12 Score=133.29 Aligned_cols=132 Identities=19% Similarity=0.216 Sum_probs=96.2
Q ss_pred CCCeEEEEecCCCcccc----cCccccCCCCCCEEEccCCCcCCCCCcccccc-----cccccccccccccccc----CC
Q 007286 65 SNNVASVTLSSMNFSGT----LSPRIGVLRTLSTLTLKGNGITGEIPEELGNL-----SSLTSLDLDNNRLVGK----IP 131 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p 131 (609)
..+++.|+|++|++++. ++..+..+++|++|+|++|.|++..+..+... ++|++|+|++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 35789999999988864 56777778889999999998875544444432 6888888888888755 45
Q ss_pred ccccCcccchhhhccCCcCCCCcCCCcCc-----ccccccccCCCCcccc----cCCccc---ccCCcccCCCCCCC
Q 007286 132 PSLGNLKKLQFLTLSQNNFSGTIPDSLTT-----LSSLISIQLDSNNLSG----QIPVHL---FQIPKYNFTGNNLN 196 (609)
Q Consensus 132 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~ip~~l---~~l~~l~~~~n~~~ 196 (609)
..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|.+++ .+|..+ .+|..|++++|+..
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 66777788888888888887544443332 5688888888888875 566543 56667788888654
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.95 E-value=1e-11 Score=132.88 Aligned_cols=132 Identities=18% Similarity=0.148 Sum_probs=106.0
Q ss_pred CCCeEEEEecCCCccccc-----CccccCCCCCCEEEccCCCcCCC----CCccccccccccccccccccccccCCcccc
Q 007286 65 SNNVASVTLSSMNFSGTL-----SPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLVGKIPPSLG 135 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 135 (609)
..+|+.|+|++|.+++.. +..+..+++|+.|+|++|.|++. ++..+.++++|++|+|++|++++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 358999999999998643 33334689999999999999954 677888899999999999999865554454
Q ss_pred Cc-----ccchhhhccCCcCCCC----cCCCcCcccccccccCCCCcccccCCcc--------cccCCcccCCCCCCC
Q 007286 136 NL-----KKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQIPVH--------LFQIPKYNFTGNNLN 196 (609)
Q Consensus 136 ~l-----~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ip~~--------l~~l~~l~~~~n~~~ 196 (609)
.. ++|+.|+|++|.+++. +|..+..+++|++|++++|.+++..+.. ..++..|++++|...
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 33 7999999999999865 5667778899999999999998654433 237888999999754
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.95 E-value=9.8e-10 Score=110.65 Aligned_cols=185 Identities=16% Similarity=0.184 Sum_probs=120.3
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCC--cceeeeEeeCCC---cceEEeec
Q 007286 289 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRN--LLRLIGFCTTPT---ERLLVYPF 362 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~ 362 (609)
.+.++.|....||+.. ..+++|+... ......+.+|.++++.+. +.. +.+++....... ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4668999999999863 5688898642 234567889999998874 333 334455443333 35789999
Q ss_pred ccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 007286 363 MQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH-------------------------------------- 404 (609)
Q Consensus 363 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------- 404 (609)
++|.++...... .++...+..++.++++.++.||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999888653321 145566677777888877777751
Q ss_pred -----------------CCCCeEecCCCCCcEEeCC--CCcEEEcccccceeeccCCcceeec--------------ccc
Q 007286 405 -----------------CNPKIIHRDVKAANVLLDE--DFEAVVGDFGLAKLVDVRKTNVTTQ--------------VRG 451 (609)
Q Consensus 405 -----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~--------------~~g 451 (609)
..+.++|+|++|.||++++ +..+.|+||+.+....... ..... ...
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHH
Confidence 1246899999999999998 5568899999987643210 00000 000
Q ss_pred cccccC-cccccCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 007286 452 TMGHIA-PEYLSTGKSSERTDVFGYGIMLLELVTGQRAI 489 (609)
Q Consensus 452 t~~y~a-PE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~ 489 (609)
..++.. |+.... .....+.|++|.++|++.+|..++
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 011112 222211 123368999999999999998764
No 396
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.86 E-value=3.7e-11 Score=117.42 Aligned_cols=134 Identities=23% Similarity=0.243 Sum_probs=88.6
Q ss_pred CCCcceeEEcCCC-CeEEEEecC---CCcccccCc------------------------cccCCCCCCE--EEccCCCcC
Q 007286 54 PCTWSNVICDNSN-NVASVTLSS---MNFSGTLSP------------------------RIGVLRTLST--LTLKGNGIT 103 (609)
Q Consensus 54 ~c~w~gv~c~~~~-~l~~L~L~~---n~l~~~~~~------------------------~~~~l~~L~~--L~L~~N~l~ 103 (609)
.|.|.|+.|+..+ ++..+...+ ..+.+.+++ .|...+.|.. ++++.|+..
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~ 156 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS 156 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH
Confidence 5789999998643 555554443 222222221 1223334444 666777543
Q ss_pred CCCCc----cccccccccccccccccccc--cCCccccCcccchhhhccCCcCCCCcCCCcCccc--ccccccCCCCccc
Q 007286 104 GEIPE----ELGNLSSLTSLDLDNNRLVG--KIPPSLGNLKKLQFLTLSQNNFSGTIPDSLTTLS--SLISIQLDSNNLS 175 (609)
Q Consensus 104 ~~~p~----~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~ 175 (609)
.++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|+++
T Consensus 157 -~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 157 -CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp -HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTG
T ss_pred -HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCc
Confidence 3332 22468899999999999997 5567788999999999999999954 3345555 8999999999999
Q ss_pred ccCCc-------ccccCCcccC
Q 007286 176 GQIPV-------HLFQIPKYNF 190 (609)
Q Consensus 176 ~~ip~-------~l~~l~~l~~ 190 (609)
+.+|. .+..+++|..
T Consensus 234 ~~~~~~~~y~~~il~~~P~L~~ 255 (267)
T 3rw6_A 234 DTFRDQSTYISAIRERFPKLLR 255 (267)
T ss_dssp GGCSSHHHHHHHHHHHCTTCCE
T ss_pred cccCcchhHHHHHHHHCcccCe
Confidence 87773 2445555543
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.79 E-value=9.2e-11 Score=121.52 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=91.1
Q ss_pred CCeEEEEecCCCcccccCccc-cCCCCCCEEEccCCCcCCCCCccc-----cccccccccccccccccc----cCCcccc
Q 007286 66 NNVASVTLSSMNFSGTLSPRI-GVLRTLSTLTLKGNGITGEIPEEL-----GNLSSLTSLDLDNNRLVG----KIPPSLG 135 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 135 (609)
.+|+.|+|++|.++......+ ..+++|+.|+|++|.|+......+ ...++|+.|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478888888888875433333 346788888898888875433333 235778899999998863 2444557
Q ss_pred CcccchhhhccCCcCCCC----cCCCcCcccccccccCCCCccccc----CCccc---ccCCcccCCCCCC
Q 007286 136 NLKKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQ----IPVHL---FQIPKYNFTGNNL 195 (609)
Q Consensus 136 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----ip~~l---~~l~~l~~~~n~~ 195 (609)
.+++|++|+|++|.|+.. ++..+...++|+.|+|++|.|+.. ++..+ .+|..|++++|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 788899999999988742 345566777899999999988742 22222 5677888888864
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.71 E-value=1.2e-09 Score=106.67 Aligned_cols=80 Identities=24% Similarity=0.344 Sum_probs=67.2
Q ss_pred cCCCCCCEEEccCCCcCC--CCCccccccccccccccccccccccCCccccCcc--cchhhhccCCcCCCCcCC------
Q 007286 87 GVLRTLSTLTLKGNGITG--EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLK--KLQFLTLSQNNFSGTIPD------ 156 (609)
Q Consensus 87 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 156 (609)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 5567788999999999999999964 4456666 999999999999987774
Q ss_pred -CcCccccccccc
Q 007286 157 -SLTTLSSLISIQ 168 (609)
Q Consensus 157 -~~~~l~~L~~L~ 168 (609)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 366788888886
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.68 E-value=7.6e-10 Score=114.59 Aligned_cols=117 Identities=22% Similarity=0.197 Sum_probs=91.7
Q ss_pred CCeEEEEecCCCcccccCccc-----cCCCCCCEEEccCCCcCC----CCCcccccccccccccccccccccc----CCc
Q 007286 66 NNVASVTLSSMNFSGTLSPRI-----GVLRTLSTLTLKGNGITG----EIPEELGNLSSLTSLDLDNNRLVGK----IPP 132 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 132 (609)
.+++.|+|++|+|+......+ ...++|++|+|++|.|+. .++..+..+++|++|+|++|+|+.. ++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 379999999999986544444 346889999999999974 2455567789999999999999842 356
Q ss_pred cccCcccchhhhccCCcCCCC----cCCCcCcccccccccCCCCcccccCCccc
Q 007286 133 SLGNLKKLQFLTLSQNNFSGT----IPDSLTTLSSLISIQLDSNNLSGQIPVHL 182 (609)
Q Consensus 133 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ip~~l 182 (609)
.+..+++|+.|+|++|.|+.. ++..+...++|++|+|++|.|+..-...+
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 677889999999999999842 33445567899999999999985443333
No 400
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.63 E-value=2.3e-07 Score=93.93 Aligned_cols=137 Identities=18% Similarity=0.223 Sum_probs=98.5
Q ss_pred CCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccC----CCcceeeeEeeCCCcceEEe
Q 007286 285 NFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVH----RNLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 285 ~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lv~ 360 (609)
.+...+.++.|....||+. |..+++|+... ......+..|.+++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~---~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR---DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc---HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4556678999999999998 67788897642 2224568899999988876 123444554 5678999
Q ss_pred ecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 007286 361 PFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC----------------------------------- 405 (609)
Q Consensus 361 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------- 405 (609)
||++|.++...... .++...+..++.++++.++.||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999887633211 1345555666677777777777431
Q ss_pred -------------------------CCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 406 -------------------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 406 -------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
.+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234699999999999999766799999998754
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=6.8e-08 Score=98.26 Aligned_cols=127 Identities=16% Similarity=0.211 Sum_probs=90.4
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccc----------------------------------
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG---------------------------------- 111 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~---------------------------------- 111 (609)
.+|+.|+|.+ +++.+-+..|.++++|+.|+|++|.+....+..|.
T Consensus 101 ~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~ 179 (329)
T 3sb4_A 101 QTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLE 179 (329)
T ss_dssp TTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCE
T ss_pred CCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccc
Confidence 4788888888 88877777888888888888888875311111000
Q ss_pred --------------------------------------------ccccccccccccccccccCCccccCcccchhhhccC
Q 007286 112 --------------------------------------------NLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 147 (609)
Q Consensus 112 --------------------------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 147 (609)
.+++|+.|+|++|+++...+..|.+|++|+.|+|++
T Consensus 180 ~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~ 259 (329)
T 3sb4_A 180 TTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPH 259 (329)
T ss_dssp EEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCT
T ss_pred eeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCc
Confidence 267888999999888855555789999999999988
Q ss_pred CcCCCCcCCCcCcccccc-cccCCCCcccccCC-ccccc---CCcccCCCCCCC
Q 007286 148 NNFSGTIPDSLTTLSSLI-SIQLDSNNLSGQIP-VHLFQ---IPKYNFTGNNLN 196 (609)
Q Consensus 148 N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~ip-~~l~~---l~~l~~~~n~~~ 196 (609)
| ++..-+.+|.++++|+ .|++.+ .++ .|+ ..|.+ |+.+++.+|...
T Consensus 260 n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 260 N-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKIT 310 (329)
T ss_dssp T-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCC
T ss_pred c-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccC
Confidence 8 7744456788899998 999988 676 454 45544 455666666543
No 402
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.55 E-value=6.2e-07 Score=89.13 Aligned_cols=143 Identities=26% Similarity=0.284 Sum_probs=94.3
Q ss_pred CccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC---CcceeeeEeeCCCcceEEeecc
Q 007286 287 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCTTPTERLLVYPFM 363 (609)
Q Consensus 287 ~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~ 363 (609)
...+.|+.|.++.||++...+|+.++||+.... .+.....|..|++.++.+.+. .+.+++++. ..++||||+
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC-CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 345789999999999999989999999986532 233346789999999999875 477777764 478999999
Q ss_pred cCchhhh-----------hhhhcCCCC-----------------CCccHHHHH---HH-----------------HHHHH
Q 007286 364 QNLSVAY-----------RLREIKPGE-----------------PVLDWVTRK---RV-----------------ALGAA 395 (609)
Q Consensus 364 ~~gsL~~-----------~l~~~~~~~-----------------~~l~~~~~~---~i-----------------~~~ia 395 (609)
+++++.. .+|...... ..-+|.... ++ ...+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9876431 123321110 001232211 00 11111
Q ss_pred HHHHHHH----hcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 396 RGLEYLH----EHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 396 ~~L~~LH----~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
+.++.+. ....+.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 2222332 2235689999999999999884 5889999 665
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=6.2e-08 Score=98.52 Aligned_cols=98 Identities=12% Similarity=0.031 Sum_probs=62.7
Q ss_pred CCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccch-hhhccCCcCCCCcCCCcCcccccccc
Q 007286 89 LRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQ-FLTLSQNNFSGTIPDSLTTLSSLISI 167 (609)
Q Consensus 89 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~L 167 (609)
+++|+.|+|++|+++...+..|.+|++|+.|+|++| ++..-+..|.+|++|+ .|+|.+ +++..-+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 667777777777777444445777777777777776 6644445677777777 777766 5653334667777777777
Q ss_pred cCCCCcccccCCcccccCCcc
Q 007286 168 QLDSNNLSGQIPVHLFQIPKY 188 (609)
Q Consensus 168 ~l~~N~l~~~ip~~l~~l~~l 188 (609)
++++|+++..-+..|.++++|
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCC
T ss_pred EeCCCccCccchhhhcCCcch
Confidence 777777763223355544443
No 404
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=6.2e-09 Score=96.58 Aligned_cols=111 Identities=15% Similarity=0.243 Sum_probs=84.9
Q ss_pred CCCeEEEEecCC-Ccccc----cCccccCCCCCCEEEccCCCcCCC----CCcccccccccccccccccccccc----CC
Q 007286 65 SNNVASVTLSSM-NFSGT----LSPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLVGK----IP 131 (609)
Q Consensus 65 ~~~l~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 131 (609)
..+|+.|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|+|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 347999999999 88742 445566778999999999999742 344455668899999999999843 45
Q ss_pred ccccCcccchhhhc--cCCcCCCC----cCCCcCcccccccccCCCCccc
Q 007286 132 PSLGNLKKLQFLTL--SQNNFSGT----IPDSLTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 132 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 175 (609)
..+...++|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66777889999999 88998843 3344555688999999999885
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.46 E-value=1.7e-06 Score=85.15 Aligned_cols=135 Identities=18% Similarity=0.128 Sum_probs=95.5
Q ss_pred cccccCCc-eEEEEEeC-CCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc-CCCcceeeeEeeCCCcceEEeecccCch
Q 007286 291 VLGQGGFG-KVYRGVLA-DGTKVAVKRLTDFESPGGDAAFQREVEMISVAV-HRNLLRLIGFCTTPTERLLVYPFMQNLS 367 (609)
Q Consensus 291 ~LG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gs 367 (609)
.+..|..| .||+.... ++..+++|+-. ......+..|...++.+. +--+.++++++.+.+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~----~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGK----GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEE----THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECC----CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556655 68998764 56789999864 234567888999998775 3336678888888888999999999988
Q ss_pred hhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 007286 368 VAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHC------------------------------------------ 405 (609)
Q Consensus 368 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------ 405 (609)
+.+..... ......+..++++.|..||...
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 76654321 1122334455555555555421
Q ss_pred -------------CCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 406 -------------NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 406 -------------~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12488999999999999887778999998864
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.39 E-value=3.8e-08 Score=108.47 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=49.2
Q ss_pred eEEEEecCCC-ccc-ccCccccCCCCCCEEEccCCCcCCC----CCcccccccccccccccccccc----ccCCccccCc
Q 007286 68 VASVTLSSMN-FSG-TLSPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLV----GKIPPSLGNL 137 (609)
Q Consensus 68 l~~L~L~~n~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l 137 (609)
|+.|+|+++. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|+.|+|++|+++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 6666666554 111 1122223455666666666655543 2223344555566666665554 2233334455
Q ss_pred ccchhhhccCCcCCCCcCCCcCcccccccccCC
Q 007286 138 KKLQFLTLSQNNFSGTIPDSLTTLSSLISIQLD 170 (609)
Q Consensus 138 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 170 (609)
++|+.|+|++|.+. .+|..+..+++|+.|+++
T Consensus 220 ~~L~~L~L~~~~~~-~l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 220 RSLVSVKVGDFEIL-ELVGFFKAAANLEEFCGG 251 (592)
T ss_dssp TTCCEEECSSCBGG-GGHHHHHHCTTCCEEEEC
T ss_pred CCCcEEeccCccHH-HHHHHHhhhhHHHhhccc
Confidence 55566666555555 234444444444444443
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.38 E-value=2.8e-06 Score=85.25 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=91.3
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC---CcceeeeEee-CCCcceEEeeccc
Q 007286 289 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCT-TPTERLLVYPFMQ 364 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~ 364 (609)
.+.++.|....||+. |..+++|+-.. ......+..|.+++..+.+. .+.+++.++. ..+..++||+|++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 456888888899998 57788887532 23456788999999998753 2456666664 4456789999999
Q ss_pred CchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 007286 365 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEH---------------------------------------- 404 (609)
Q Consensus 365 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------------------------------------- 404 (609)
|.++...... .++...+..++.++++.|..||+.
T Consensus 97 G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 9887653111 022223333333344333333321
Q ss_pred -----------------CCCCeEecCCCCCcEEeCC---CCc-EEEcccccceee
Q 007286 405 -----------------CNPKIIHRDVKAANVLLDE---DFE-AVVGDFGLAKLV 438 (609)
Q Consensus 405 -----------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DfGla~~~ 438 (609)
..+.++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2346799999999999997 345 589999988753
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.33 E-value=7.2e-08 Score=106.25 Aligned_cols=127 Identities=14% Similarity=0.101 Sum_probs=92.5
Q ss_pred CCeEEEEecCCCcccc----cCccccCCCCCCEEEccCCCcCC----CCCccccccccccccccccccccccCCccccCc
Q 007286 66 NNVASVTLSSMNFSGT----LSPRIGVLRTLSTLTLKGNGITG----EIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNL 137 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 137 (609)
.+|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++ .++..+.++++|+.|+|++|.+.+ +|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 5899999999988765 44456678999999999999973 345556678999999999999884 77788888
Q ss_pred ccchhhhccCCcCC---CCcCCCcCcccccccccCCCCcccccCCcc---cccCCcccCCCCC
Q 007286 138 KKLQFLTLSQNNFS---GTIPDSLTTLSSLISIQLDSNNLSGQIPVH---LFQIPKYNFTGNN 194 (609)
Q Consensus 138 ~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~---l~~l~~l~~~~n~ 194 (609)
++|+.|+++++... +..+..+..+++|+.|+++++... .+|.. +.+|+.|++++|.
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~ 304 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYAL 304 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCc
Confidence 88888888764332 233455667777777777775433 45543 3466667777766
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.24 E-value=6.1e-06 Score=84.83 Aligned_cols=145 Identities=12% Similarity=0.104 Sum_probs=92.6
Q ss_pred CccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCC--cceeeeEeeCC-CcceEEeecc
Q 007286 287 SEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN--LLRLIGFCTTP-TERLLVYPFM 363 (609)
Q Consensus 287 ~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~ 363 (609)
...+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.++++++... ...++||||+
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 3456789999999999886 5889999987421 35889999999887544 45677776654 5678999999
Q ss_pred cCchhhhh------------------hhhcCCCC-CC------------ccHHHH---------------------HHHH
Q 007286 364 QNLSVAYR------------------LREIKPGE-PV------------LDWVTR---------------------KRVA 391 (609)
Q Consensus 364 ~~gsL~~~------------------l~~~~~~~-~~------------l~~~~~---------------------~~i~ 391 (609)
++.++.+. |+...... .. -.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98665421 12111100 00 001111 1111
Q ss_pred HHHHHHHHHHHhc-CCCCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 392 LGAARGLEYLHEH-CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 392 ~~ia~~L~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
..+...+.++... ..+.++|+|+++.||+++++..+.|+||+.+..-
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 2222233333221 1257899999999999988777889999998754
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.22 E-value=1.6e-08 Score=111.59 Aligned_cols=128 Identities=15% Similarity=0.140 Sum_probs=71.3
Q ss_pred CeEEEEecCCCcccccCcccc-CCCCCCEEEcc--C----CCcCCC-----CCccccccccccccccccccccccCCccc
Q 007286 67 NVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLK--G----NGITGE-----IPEELGNLSSLTSLDLDNNRLVGKIPPSL 134 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 134 (609)
+|+.|.++.|++++.....+. .+++|+.|+|+ + |.+++. ++..+.++++|+.|+|++ .+++..+..+
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l 451 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYI 451 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHH
Confidence 455555555555554444443 36666666666 3 444421 111244566666666655 5554444444
Q ss_pred cC-cccchhhhccCCcCCCCcCCCc-CcccccccccCCCCcccccCC----cccccCCcccCCCCCC
Q 007286 135 GN-LKKLQFLTLSQNNFSGTIPDSL-TTLSSLISIQLDSNNLSGQIP----VHLFQIPKYNFTGNNL 195 (609)
Q Consensus 135 ~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~ip----~~l~~l~~l~~~~n~~ 195 (609)
+. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+ ..+.+|+.|++++|+.
T Consensus 452 ~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 452 GTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 44 6677777777777664433333 456777777777777753322 2345666666766653
No 411
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.20 E-value=3.7e-06 Score=86.32 Aligned_cols=81 Identities=10% Similarity=0.027 Sum_probs=55.3
Q ss_pred cCcc-cccCCceEEEEEeC-------CCcEEEEEEeccCCC--CchHHHHHHHHHHHHhccC---CCcceeeeEeeCC--
Q 007286 289 KNVL-GQGGFGKVYRGVLA-------DGTKVAVKRLTDFES--PGGDAAFQREVEMISVAVH---RNLLRLIGFCTTP-- 353 (609)
Q Consensus 289 ~~~L-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~~--~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~-- 353 (609)
.+.| +.|....+|+.... ++..+++|+...... ......+..|+.+++.+.. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998764 267889987643210 0012457788888887753 3466788877655
Q ss_pred -CcceEEeecccCchhh
Q 007286 354 -TERLLVYPFMQNLSVA 369 (609)
Q Consensus 354 -~~~~lv~e~~~~gsL~ 369 (609)
...++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.17 E-value=4.2e-08 Score=90.87 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=88.3
Q ss_pred ccccCccccCCCCCCEEEccCC-CcCCC----CCcccccccccccccccccccccc----CCccccCcccchhhhccCCc
Q 007286 79 SGTLSPRIGVLRTLSTLTLKGN-GITGE----IPEELGNLSSLTSLDLDNNRLVGK----IPPSLGNLKKLQFLTLSQNN 149 (609)
Q Consensus 79 ~~~~~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~ 149 (609)
...+...+...++|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|+.|+|++|.
T Consensus 25 ~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 25 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 3345556778899999999999 88742 445566778999999999999742 34455667899999999999
Q ss_pred CCCC----cCCCcCcccccccccC--CCCcccccCC----ccc---ccCCcccCCCCCC
Q 007286 150 FSGT----IPDSLTTLSSLISIQL--DSNNLSGQIP----VHL---FQIPKYNFTGNNL 195 (609)
Q Consensus 150 l~~~----~p~~~~~l~~L~~L~l--~~N~l~~~ip----~~l---~~l~~l~~~~n~~ 195 (609)
|+.. +...+...++|++|+| ++|.|...-. ..+ .+|..|++++|..
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 9843 4566777889999999 8899974322 222 4677888888753
No 413
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.06 E-value=1.3e-07 Score=104.14 Aligned_cols=107 Identities=18% Similarity=0.197 Sum_probs=61.0
Q ss_pred CCeEEEEecCCCcccccCcccc-CCCCCCEEEccCC-CcCCC-CCccccccccccccccccccccccCCcccc----Ccc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIG-VLRTLSTLTLKGN-GITGE-IPEELGNLSSLTSLDLDNNRLVGKIPPSLG----NLK 138 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~----~l~ 138 (609)
.+|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3667777777766665555554 4667777777766 44422 333344667777777777776654333332 455
Q ss_pred cchhhhccCCc--CCC-CcCCCcCcccccccccCCCC
Q 007286 139 KLQFLTLSQNN--FSG-TIPDSLTTLSSLISIQLDSN 172 (609)
Q Consensus 139 ~L~~L~l~~N~--l~~-~~p~~~~~l~~L~~L~l~~N 172 (609)
+|+.|+|++|. ++. .++..+..+++|++|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 77777777665 110 01111233567777777766
No 414
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.05 E-value=3.8e-07 Score=93.58 Aligned_cols=127 Identities=14% Similarity=0.214 Sum_probs=86.8
Q ss_pred CCCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccc--cccccccccccc--cccccc-----CCccc-
Q 007286 65 SNNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELG--NLSSLTSLDLDN--NRLVGK-----IPPSL- 134 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~~- 134 (609)
.++|+.|+|++|.-. .+++ + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 468999999887311 2333 4 389999999999888744333444 689999999863 322211 11122
Q ss_pred -cCcccchhhhccCCcCCCCcCCCcC---cccccccccCCCCccccc----CCcc---cccCCcccCCCCC
Q 007286 135 -GNLKKLQFLTLSQNNFSGTIPDSLT---TLSSLISIQLDSNNLSGQ----IPVH---LFQIPKYNFTGNN 194 (609)
Q Consensus 135 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----ip~~---l~~l~~l~~~~n~ 194 (609)
..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++. ++.. +.+|..|++++|.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 3578999999999998754333332 578999999999999863 3333 4677888888774
No 415
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.00 E-value=2.5e-05 Score=79.34 Aligned_cols=141 Identities=15% Similarity=0.217 Sum_probs=80.0
Q ss_pred CcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC--Ccceeee------EeeCCCcceEEee
Q 007286 290 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR--NLLRLIG------FCTTPTERLLVYP 361 (609)
Q Consensus 290 ~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~------~~~~~~~~~lv~e 361 (609)
+.|+.|..+.||+....+| .+++|+... ....+..|..++..+... .+.+++. +....+..+++++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR-----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS-----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC-----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 4566677899999987654 589998864 123444566665555321 2333332 1123456789999
Q ss_pred cccCchhh--------------hhhhhcCC-----CC-----CCccHHHH------------------------------
Q 007286 362 FMQNLSVA--------------YRLREIKP-----GE-----PVLDWVTR------------------------------ 387 (609)
Q Consensus 362 ~~~~gsL~--------------~~l~~~~~-----~~-----~~l~~~~~------------------------------ 387 (609)
|++|..+. ..+|.... .. ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986442 11222111 00 01122211
Q ss_pred -HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 388 -KRVALGAARGLEYLHE----------HCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 388 -~~i~~~ia~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
..+...+.+++.+|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111123445666763 124589999999999999888889999999875
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.98 E-value=4.2e-05 Score=79.61 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=50.3
Q ss_pred cCcccccCCceEEEEEeC-CCcEEEEEEeccCCC------CchHHHHHHHHHHHHhccC--CCcc-eeeeEeeCCCcceE
Q 007286 289 KNVLGQGGFGKVYRGVLA-DGTKVAVKRLTDFES------PGGDAAFQREVEMISVAVH--RNLL-RLIGFCTTPTERLL 358 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~l 358 (609)
.+.||.|.++.||++... +++.++||....... +.....+..|.+++..+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999764 478999998653211 1223456789999887753 4444 45544 3445789
Q ss_pred EeecccCc
Q 007286 359 VYPFMQNL 366 (609)
Q Consensus 359 v~e~~~~g 366 (609)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.95 E-value=1e-05 Score=84.42 Aligned_cols=123 Identities=14% Similarity=0.126 Sum_probs=85.7
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccc-----ccCCccccCcccch
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV-----GKIPPSLGNLKKLQ 141 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~ 141 (609)
+|+.|+|.+| ++.+-...|.+ .+|+.+.| .|+++..-+..|.++++|+.++|.+|.+. ..-+..|.+|++|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 6788888763 66555666766 78888888 45566455667888888888888887765 34456788888888
Q ss_pred hhhccCCcCCCCcCCCcCcccccccccCCCCcccccCC-cccc--cCCcccCCCCCC
Q 007286 142 FLTLSQNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLF--QIPKYNFTGNNL 195 (609)
Q Consensus 142 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~--~l~~l~~~~n~~ 195 (609)
.++|. |+++..-..+|.+|++|+.|.|.+| ++ .|+ ..|. +|..+.+.+|..
T Consensus 304 ~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~~ 357 (401)
T 4fdw_A 304 RFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTTP 357 (401)
T ss_dssp EECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTTSSSSSCCCEEEECCSSC
T ss_pred eEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCCC
Confidence 88888 4477344567788888888888655 55 344 3333 566677777643
No 418
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.92 E-value=1.1e-06 Score=90.06 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=85.8
Q ss_pred CCCeEEEEecCCCcc---------cccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCcccc
Q 007286 65 SNNVASVTLSSMNFS---------GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLG 135 (609)
Q Consensus 65 ~~~l~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 135 (609)
..+|+.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++......++
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 358999988765432 124455677899999999988411 3443 4 388999999998887644433444
Q ss_pred --CcccchhhhccC--CcCCCC-----cCCCc--CcccccccccCCCCcccccCCc------ccccCCcccCCCCCC
Q 007286 136 --NLKKLQFLTLSQ--NNFSGT-----IPDSL--TTLSSLISIQLDSNNLSGQIPV------HLFQIPKYNFTGNNL 195 (609)
Q Consensus 136 --~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~ip~------~l~~l~~l~~~~n~~ 195 (609)
.+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.+....+. .+.+|..|+++.|..
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 789999999863 332221 11122 3578999999999998754432 356788899988764
No 419
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.89 E-value=4e-05 Score=80.48 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=49.3
Q ss_pred CCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcceeecc-cccccccCcccccCC---CCCcchhhHHHHHHHHH
Q 007286 406 NPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQV-RGTMGHIAPEYLSTG---KSSERTDVFGYGIMLLE 481 (609)
Q Consensus 406 ~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gv~l~e 481 (609)
.+.++|+|++|.||+++.++ ++|+||+.+..-.... ...... .-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 9999999987543210 000000 012345666554311 12234566688888888
Q ss_pred HHhCC
Q 007286 482 LVTGQ 486 (609)
Q Consensus 482 lltg~ 486 (609)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 420
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.80 E-value=8.1e-05 Score=73.74 Aligned_cols=79 Identities=24% Similarity=0.283 Sum_probs=57.0
Q ss_pred cCCCccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC---CcceeeeEeeCCCcceEEe
Q 007286 284 DNFSEKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR---NLLRLIGFCTTPTERLLVY 360 (609)
Q Consensus 284 ~~~~~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~ 360 (609)
......+.+|.|..+.||+.+..||+.|+||+-.... ......|..|.+.|+.+... -+.+++++. ..++||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 3455567899999999999999999999999865322 33345688999999887522 244455542 357899
Q ss_pred ecccCch
Q 007286 361 PFMQNLS 367 (609)
Q Consensus 361 e~~~~gs 367 (609)
||++.+.
T Consensus 90 e~l~~~~ 96 (288)
T 3f7w_A 90 EWVDERP 96 (288)
T ss_dssp ECCCCCC
T ss_pred EeecccC
Confidence 9987653
No 421
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.79 E-value=0.00012 Score=73.16 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=93.0
Q ss_pred ccCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhcc---CCCcceeeeEeeCCCcceEEeeccc
Q 007286 288 EKNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAV---HRNLLRLIGFCTTPTERLLVYPFMQ 364 (609)
Q Consensus 288 ~~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~ 364 (609)
..+.|+.|....+|+... ++..+++|+... .....|..|.+.++.+. ...+.++++++...+..++||||++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINER----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEG----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCc----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 346789999999999986 477899998753 23567889999988875 2567788888887888999999999
Q ss_pred Cchhhh-----------hhhhcCC-CC-----------------CCccHHHHH---HHHH----------------HHHH
Q 007286 365 NLSVAY-----------RLREIKP-GE-----------------PVLDWVTRK---RVAL----------------GAAR 396 (609)
Q Consensus 365 ~gsL~~-----------~l~~~~~-~~-----------------~~l~~~~~~---~i~~----------------~ia~ 396 (609)
+..+.. .++.... .. ..-+|.... ++.. .+..
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 875421 2333221 00 011344321 1111 1111
Q ss_pred H-HHHHHh-cCCCCeEecCCCCCcEEeCCCCcEEEcccc
Q 007286 397 G-LEYLHE-HCNPKIIHRDVKAANVLLDEDFEAVVGDFG 433 (609)
Q Consensus 397 ~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DfG 433 (609)
. ...|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 223321 2356899999999999999887 8899984
No 422
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.67 E-value=5e-05 Score=79.08 Aligned_cols=121 Identities=14% Similarity=0.198 Sum_probs=73.3
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+|+.+.|.+ ++..+-+..|.++++|+.++|++|+++ .+|...-.+++|+.+.|.+| ++..-...|.+|++|+.++|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 477777765 666566677888888888888888887 44443333577777777744 664445567778888888777
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCC-cccc---cCCcccCCCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIP-VHLF---QIPKYNFTGNN 194 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip-~~l~---~l~~l~~~~n~ 194 (609)
+| ++..-..+|.+ .+|+.+.+ .|.++ .|+ ..|. +|+.+.+.+|.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGST 282 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSC
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCcc
Confidence 64 44222334444 56666666 33444 343 3333 34444554443
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.45 E-value=8.8e-06 Score=73.65 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=43.3
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCC-cCCCCCcccccc----cccccccccccc-ccccCCccccCcccc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNG-ITGEIPEELGNL----SSLTSLDLDNNR-LVGKIPPSLGNLKKL 140 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 140 (609)
+|+.|||+++.++..--..+..+++|+.|+|+++. |+..--..++.+ ++|++|+|+++. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57777777776664433445666677777776664 543222223332 356666666653 542222234455555
Q ss_pred hhhhccCC
Q 007286 141 QFLTLSQN 148 (609)
Q Consensus 141 ~~L~l~~N 148 (609)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.45 E-value=2e-05 Score=71.24 Aligned_cols=94 Identities=11% Similarity=0.033 Sum_probs=69.9
Q ss_pred cCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccc-ccccCCccccCc----ccchhhhccCCc-CCCCcC
Q 007286 82 LSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNR-LVGKIPPSLGNL----KKLQFLTLSQNN-FSGTIP 155 (609)
Q Consensus 82 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p 155 (609)
+|.....-.+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..-=..++.+ ++|+.|+|+++. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 34433333579999999999986655668899999999999995 774333345554 479999999975 773322
Q ss_pred CCcCcccccccccCCCCc-cc
Q 007286 156 DSLTTLSSLISIQLDSNN-LS 175 (609)
Q Consensus 156 ~~~~~l~~L~~L~l~~N~-l~ 175 (609)
..+..+++|++|+|+++. ++
T Consensus 133 ~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHGGGCTTCCEEEEESCTTCC
T ss_pred HHHhcCCCCCEEECCCCCCCC
Confidence 357789999999999986 44
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.38 E-value=0.00078 Score=68.03 Aligned_cols=144 Identities=17% Similarity=0.067 Sum_probs=73.3
Q ss_pred cCcccccCCce-EEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCC--CcceeeeEeeCCCcceEEeecccC
Q 007286 289 KNVLGQGGFGK-VYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHR--NLLRLIGFCTTPTERLLVYPFMQN 365 (609)
Q Consensus 289 ~~~LG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~~~~lv~e~~~~ 365 (609)
.+.|+.|+... +|+....+|..+++|...... ...+..|+.++..+... .+.+++.+.... .+++||++.+
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~ 96 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGD 96 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCS
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCC
Confidence 34566565554 677766447778887654321 12334566766666422 245566654332 3789999877
Q ss_pred chhhhhhhh---------------------cCCC-CCCccHHHHH-------H-------------HHHHHHHHHHHHHh
Q 007286 366 LSVAYRLRE---------------------IKPG-EPVLDWVTRK-------R-------------VALGAARGLEYLHE 403 (609)
Q Consensus 366 gsL~~~l~~---------------------~~~~-~~~l~~~~~~-------~-------------i~~~ia~~L~~LH~ 403 (609)
.++...+.. .... -..++..... . ....+.+.++.+.+
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 655433321 1100 0111111000 0 00111222233311
Q ss_pred ---cCCCCeEecCCCCCcEEeCCC----CcEEEcccccceee
Q 007286 404 ---HCNPKIIHRDVKAANVLLDED----FEAVVGDFGLAKLV 438 (609)
Q Consensus 404 ---~~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~~ 438 (609)
...+.++|||+.+.||+++.+ ..+.|+||+.+..-
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 123479999999999999875 67999999998753
No 426
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.38 E-value=0.00065 Score=68.22 Aligned_cols=160 Identities=12% Similarity=0.067 Sum_probs=88.1
Q ss_pred cCHHHHHHHhcCCCc-----cCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc--cee
Q 007286 274 YSWRELQLATDNFSE-----KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL--LRL 346 (609)
Q Consensus 274 ~~~~el~~~~~~~~~-----~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l 346 (609)
.+.+++......|.. .+.|+.|....+|+....+| .+++|...... ....+..|+.++..+....+ .++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 344555554455654 23466788899999987655 68899876421 12345567777776653222 333
Q ss_pred eeEe------eCCCcceEEeecccCchhhh--------------hhhhcCC----CC----CCccHHHHHH---------
Q 007286 347 IGFC------TTPTERLLVYPFMQNLSVAY--------------RLREIKP----GE----PVLDWVTRKR--------- 389 (609)
Q Consensus 347 ~~~~------~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~----~~----~~l~~~~~~~--------- 389 (609)
+... ...+..+++++|++|..+.. .++.... .. ....|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 3211 12345688999998754321 1222111 00 0112322110
Q ss_pred ---HHHHHHHHHHHHHhc----CCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 390 ---VALGAARGLEYLHEH----CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 390 ---i~~~ia~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
+...+.+.++++++. ...+++|+|+.+.||+++++..+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455666532 234799999999999999876668999998763
No 427
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.25 E-value=0.0009 Score=70.17 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=50.9
Q ss_pred cCcccccCCceEEEEEeCC--------CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc-ceeeeEeeCCCcceEE
Q 007286 289 KNVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 359 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 359 (609)
.+.|+.|....+|+....+ +..+++|+.... .....+..|..+++.+...++ .++++.+.. .+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 4568888899999998753 578999987431 122566689999888864444 456665532 389
Q ss_pred eecccCchh
Q 007286 360 YPFMQNLSV 368 (609)
Q Consensus 360 ~e~~~~gsL 368 (609)
+||+++.++
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999986444
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.23 E-value=0.00023 Score=61.21 Aligned_cols=56 Identities=23% Similarity=0.275 Sum_probs=35.6
Q ss_pred EEEecCCCcc-cccCccccCCCCCCEEEccCCCcCCCCCcccccccccccccccccccc
Q 007286 70 SVTLSSMNFS-GTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLV 127 (609)
Q Consensus 70 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 127 (609)
.++.++++|+ ..+|..+ .++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5667777776 3455433 345777777777777444455666777777777777654
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.20 E-value=0.0023 Score=63.51 Aligned_cols=139 Identities=12% Similarity=0.046 Sum_probs=76.3
Q ss_pred cCcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCcc-eeeeEeeCCCcceEEeecc-cCc
Q 007286 289 KNVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLL-RLIGFCTTPTERLLVYPFM-QNL 366 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~-~~g 366 (609)
.+.|+.|....+|+. ..+++|+....... ..+...|+.+++.+...++. +++++ ..+..++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 577889999999998 56888877542111 11235688888777543443 45544 344457899999 654
Q ss_pred hhhh------------------hhhhcCCC-CCCccHHH-HHHHHH--------------HHHHHHH----HHHh-cCCC
Q 007286 367 SVAY------------------RLREIKPG-EPVLDWVT-RKRVAL--------------GAARGLE----YLHE-HCNP 407 (609)
Q Consensus 367 sL~~------------------~l~~~~~~-~~~l~~~~-~~~i~~--------------~ia~~L~----~LH~-~~~~ 407 (609)
++.. .+|..... ....+... ...+.. .+.+.+. .+.. ...+
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 4431 11111110 00011111 111100 1111111 1211 1234
Q ss_pred CeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 408 KIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 408 ~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
.++|+|+.+.||+ ..++.+.++||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 6899999999999 5566789999998864
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.12 E-value=0.0042 Score=62.33 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=82.3
Q ss_pred CcccccCCceEEEEEeCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCC--cceeeeE-----eeCCCcceEEeec
Q 007286 290 NVLGQGGFGKVYRGVLADGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRN--LLRLIGF-----CTTPTERLLVYPF 362 (609)
Q Consensus 290 ~~LG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~-----~~~~~~~~lv~e~ 362 (609)
..++ |....||+....+|+.+++|...... .....+..|..++..+.... +.+++.. ....+..+++++|
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 3466 88889999887778889999986321 13456777888887775322 3444443 1113345679999
Q ss_pred ccCchhhh--------------hhhhcCC-----CCCCccHHHH----HHH---------------HHHHHHHHHHHHhc
Q 007286 363 MQNLSVAY--------------RLREIKP-----GEPVLDWVTR----KRV---------------ALGAARGLEYLHEH 404 (609)
Q Consensus 363 ~~~gsL~~--------------~l~~~~~-----~~~~l~~~~~----~~i---------------~~~ia~~L~~LH~~ 404 (609)
++|..+.. .+|.... ....+++... ..+ ...+.+.++.+...
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 98754321 1121111 0111222111 000 11111223333221
Q ss_pred ----CCCCeEecCCCCCcEEeCCCCcEEEccccccee
Q 007286 405 ----CNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKL 437 (609)
Q Consensus 405 ----~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~ 437 (609)
..+.++|+|+++.||+++ + .+.|+||+.+..
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999998764
No 431
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.99 E-value=0.0069 Score=63.83 Aligned_cols=74 Identities=12% Similarity=0.109 Sum_probs=48.3
Q ss_pred cCcccccCCceEEEEEeCC-CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc-ceeeeEeeCCCcceEEeecccCc
Q 007286 289 KNVLGQGGFGKVYRGVLAD-GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLVYPFMQNL 366 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~g 366 (609)
.+.|+.|-...+|+....+ +..+++|+..... .. .-+...|..++..+...++ .++++++. + ..|+||+++.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence 4568888899999999865 5788888764321 11 1112578889988875555 45666662 2 3599999875
Q ss_pred hh
Q 007286 367 SV 368 (609)
Q Consensus 367 sL 368 (609)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 432
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.98 E-value=0.005 Score=63.17 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=83.4
Q ss_pred cCcccccCCceEEEEEeC--------CCcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc-ceeeeEeeCCCcceEE
Q 007286 289 KNVLGQGGFGKVYRGVLA--------DGTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 359 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 359 (609)
.+.|..|-...+|+.... +++.+++|+.... ......+.+|.++++.+...++ .++++++.. .+|
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 356777888999999875 2578999985321 2235667789999988763333 456666543 289
Q ss_pred eecccCchhhhh-----------------hhhcCC-CCCCc--cHHHHHHHHHHHH-------------------HHHHH
Q 007286 360 YPFMQNLSVAYR-----------------LREIKP-GEPVL--DWVTRKRVALGAA-------------------RGLEY 400 (609)
Q Consensus 360 ~e~~~~gsL~~~-----------------l~~~~~-~~~~l--~~~~~~~i~~~ia-------------------~~L~~ 400 (609)
+||++|.++... +|.... ..... -+.+..++..++. ..+.+
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999998655311 121111 11111 2333344433321 12333
Q ss_pred HH----hc-CCCCeEecCCCCCcEEeCCC----CcEEEccccccee
Q 007286 401 LH----EH-CNPKIIHRDVKAANVLLDED----FEAVVGDFGLAKL 437 (609)
Q Consensus 401 LH----~~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DfGla~~ 437 (609)
|. .. ....++|+|+.+.||+++.+ +.+.|+||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 32 21 23368999999999999876 7899999998864
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.93 E-value=0.00097 Score=57.27 Aligned_cols=57 Identities=25% Similarity=0.325 Sum_probs=47.9
Q ss_pred CEEEccCCCcC-CCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCC
Q 007286 93 STLTLKGNGIT-GEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFS 151 (609)
Q Consensus 93 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 151 (609)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999997 46776554 57999999999999655667899999999999999886
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.92 E-value=6.1e-05 Score=69.47 Aligned_cols=109 Identities=14% Similarity=0.192 Sum_probs=63.9
Q ss_pred CCeEEEEecCC-Cccc----ccCccccCCCCCCEEEccCCCcCCC----CCcccccccccccccccccccccc----CCc
Q 007286 66 NNVASVTLSSM-NFSG----TLSPRIGVLRTLSTLTLKGNGITGE----IPEELGNLSSLTSLDLDNNRLVGK----IPP 132 (609)
Q Consensus 66 ~~l~~L~L~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~ 132 (609)
..|+.|+|++| +|.. .+...+..-+.|+.|+|++|.|... +...+..-+.|+.|+|++|+|+.. +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46888888875 6653 2344555567788888888888732 233344456788888888887632 122
Q ss_pred cccCcccchhhhccCCcC---CC----CcCCCcCcccccccccCCCCcc
Q 007286 133 SLGNLKKLQFLTLSQNNF---SG----TIPDSLTTLSSLISIQLDSNNL 174 (609)
Q Consensus 133 ~~~~l~~L~~L~l~~N~l---~~----~~p~~~~~l~~L~~L~l~~N~l 174 (609)
.+..-+.|+.|+|++|.. .. .+-..+..-+.|+.|+++.|.+
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 344445677777775532 21 1222333445666677766654
No 435
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.85 E-value=0.0031 Score=64.57 Aligned_cols=74 Identities=9% Similarity=0.033 Sum_probs=44.6
Q ss_pred cCcccccCCceEEEEEeCC---------CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc-ceeeeEeeCCCcceE
Q 007286 289 KNVLGQGGFGKVYRGVLAD---------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLL 358 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~l 358 (609)
.+.|+.|....+|+....+ +..+++|+..... ....+...|.+++..+...++ .++++.. ...+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~ 111 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNTF----NGGR 111 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEec----CCcE
Confidence 3567888889999998754 2688888764321 111124678888887764444 3566544 2468
Q ss_pred EeecccCchh
Q 007286 359 VYPFMQNLSV 368 (609)
Q Consensus 359 v~e~~~~gsL 368 (609)
||+|++|.++
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987543
No 436
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.82 E-value=0.00094 Score=69.21 Aligned_cols=111 Identities=11% Similarity=0.225 Sum_probs=62.4
Q ss_pred cccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhccCCcCCCCcCCC
Q 007286 78 FSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQNNFSGTIPDS 157 (609)
Q Consensus 78 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 157 (609)
+..+-...|.++.+|+.+.+.++..+ .-...|.++++|+.+.+. +.++..-...|.+|.+|+.++|..| ++..-..+
T Consensus 253 v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 329 (394)
T 4gt6_A 253 VARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDA 329 (394)
T ss_dssp EEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhH
Confidence 33344455666777777777655443 444556667777777765 3444333445667777777777644 44223446
Q ss_pred cCcccccccccCCCCcccccCC-cccc---cCCcccCCCC
Q 007286 158 LTTLSSLISIQLDSNNLSGQIP-VHLF---QIPKYNFTGN 193 (609)
Q Consensus 158 ~~~l~~L~~L~l~~N~l~~~ip-~~l~---~l~~l~~~~n 193 (609)
|.++.+|+.+.+..+ ++ .|+ ..|. +|+.+.+.+|
T Consensus 330 F~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 330 FAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred hhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 666777777776543 44 344 2343 3444455554
No 437
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.71 E-value=0.0028 Score=65.10 Aligned_cols=102 Identities=15% Similarity=0.127 Sum_probs=49.3
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
+++.+.+..+ +..+....+.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|++|+.+.+.
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~ 294 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMD 294 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEEC
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccccccccc
Confidence 3444444332 33344445555556666655544 33233344555555555555433 332223345555555555555
Q ss_pred CCcCCCCcCCCcCcccccccccCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDS 171 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~ 171 (609)
+|.++..-+.+|.++.+|+.+.|..
T Consensus 295 ~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 295 NSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccccceehhhhhcCCCCCCEEEcCc
Confidence 5555522234455555555555543
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.66 E-value=0.01 Score=59.93 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=28.2
Q ss_pred CCeEecCCCCCcEEeCCCCcEEEcccccceee
Q 007286 407 PKIIHRDVKAANVLLDEDFEAVVGDFGLAKLV 438 (609)
Q Consensus 407 ~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~ 438 (609)
..++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887643
No 439
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.47 E-value=0.002 Score=66.79 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=81.3
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
.++.+.+..+. +....|..+.+|+.+.+..| ++..-...|.++++|+.++|.++ ++..-...|.+|++|+.++|.
T Consensus 277 ~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 277 GLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred ccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 45555554432 23456788999999999765 66445667999999999999755 764445689999999999998
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCcccccCCcccccCCcc
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLSGQIPVHLFQIPKY 188 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ip~~l~~l~~l 188 (609)
.| ++..-..+|.++++|+.+++..| ++ .+...|.+.++|
T Consensus 352 ~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L 390 (394)
T 4fs7_A 352 LS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKF 390 (394)
T ss_dssp TT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEE
T ss_pred cc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCC
Confidence 77 77344568999999999998754 33 344445544443
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.09 E-value=0.01 Score=61.21 Aligned_cols=57 Identities=11% Similarity=0.020 Sum_probs=39.2
Q ss_pred CCeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccc
Q 007286 66 NNVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNN 124 (609)
Q Consensus 66 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 124 (609)
.+|+.+.|.+ +++.+-...|.++++|+.++|.+| ++..-...|.++++|+.+.+..+
T Consensus 71 ~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~ 127 (394)
T 4fs7_A 71 RKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM 127 (394)
T ss_dssp TTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred CCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc
Confidence 3688888864 466566677888888888888654 55333456777777777776544
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.00 E-value=0.01 Score=60.87 Aligned_cols=102 Identities=16% Similarity=0.110 Sum_probs=55.0
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
.|+.+.+..+ ++.+-...|.++.+|+.+.+..+ ++..-...|.++++|+.++|.+|.++..-...|.+|.+|+.+.|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 4555555543 44344455566666666666433 432333455666666666666666653334456666666666665
Q ss_pred CCcCCCCcCCCcCcccccccccCCC
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDS 171 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~ 171 (609)
.| ++..-..+|.++++|+.+.+..
T Consensus 319 ~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 319 TA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cc-ccEEHHHHhhCCCCCCEEEECC
Confidence 43 4412234566666666665543
No 442
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.95 E-value=0.033 Score=51.59 Aligned_cols=104 Identities=16% Similarity=0.096 Sum_probs=67.2
Q ss_pred CchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccceeeccCCcc
Q 007286 365 NLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTN 444 (609)
Q Consensus 365 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 444 (609)
.-+|.+.|.... .+++..+++.++.|.+.+|.-+-.+..+ ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 32 ~vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 32 ALSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred cccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc--------
Confidence 347888887643 4599999999999999998776221111 1233457889999999888763 1110
Q ss_pred eeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCC
Q 007286 445 VTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRA 488 (609)
Q Consensus 445 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p 488 (609)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888763 3557889999999999998865544
No 443
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.77 E-value=0.00069 Score=62.36 Aligned_cols=90 Identities=13% Similarity=0.159 Sum_probs=64.2
Q ss_pred ccccCCCCCCEEEccCC-CcCCC----CCccccccccccccccccccccccCC----ccccCcccchhhhccCCcCCCC-
Q 007286 84 PRIGVLRTLSTLTLKGN-GITGE----IPEELGNLSSLTSLDLDNNRLVGKIP----PSLGNLKKLQFLTLSQNNFSGT- 153 (609)
Q Consensus 84 ~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~- 153 (609)
..+.+-+.|+.|+|++| .|... +-..+..-+.|+.|+|++|+|...-- ..+..-+.|+.|+|++|.|+..
T Consensus 35 ~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G 114 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL 114 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH
T ss_pred HHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH
Confidence 34455688999999986 77632 34445666889999999999983322 3344568899999999999842
Q ss_pred ---cCCCcCcccccccccCCCCc
Q 007286 154 ---IPDSLTTLSSLISIQLDSNN 173 (609)
Q Consensus 154 ---~p~~~~~l~~L~~L~l~~N~ 173 (609)
+-..+..-+.|+.|+|++|.
T Consensus 115 a~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 115 LARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHhhCCceeEEECCCCc
Confidence 22345555679999998763
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.68 E-value=0.039 Score=56.81 Aligned_cols=144 Identities=19% Similarity=0.218 Sum_probs=82.1
Q ss_pred CcccccCCceEEEEEeCC--------CcEEEEEEeccCCCC----------ch-------HHHHHHHHHHHHhccCCCc-
Q 007286 290 NVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESP----------GG-------DAAFQREVEMISVAVHRNL- 343 (609)
Q Consensus 290 ~~LG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~----------~~-------~~~~~~E~~~l~~l~H~ni- 343 (609)
+.|..|-...+|+....+ ++.|.+++.-..... .. .+....|..+++.+...++
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999998754 367888876432110 00 1123358888888864444
Q ss_pred ceeeeEeeCCCcceEEeecccCchhhhh-----------------hhhcC-CCCCCcc--HHHHHHHHHHHH--------
Q 007286 344 LRLIGFCTTPTERLLVYPFMQNLSVAYR-----------------LREIK-PGEPVLD--WVTRKRVALGAA-------- 395 (609)
Q Consensus 344 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~-~~~~~l~--~~~~~~i~~~ia-------- 395 (609)
.++++++.. .+|+||+++-+|... +|... +...... +....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 456666542 289999987544321 11111 1111122 223333332221
Q ss_pred --------------HHHH----HHHhc-CCCCeEecCCCCCcEEeCCC------CcEEEccccccee
Q 007286 396 --------------RGLE----YLHEH-CNPKIIHRDVKAANVLLDED------FEAVVGDFGLAKL 437 (609)
Q Consensus 396 --------------~~L~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DfGla~~ 437 (609)
.-+. +|... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 23222 23368899999999999876 7899999998863
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.62 E-value=0.014 Score=60.25 Aligned_cols=105 Identities=13% Similarity=0.169 Sum_probs=71.1
Q ss_pred CeEEEEecCCCcccccCccccCCCCCCEEEccCCCcCCCCCccccccccccccccccccccccCCccccCcccchhhhcc
Q 007286 67 NVASVTLSSMNFSGTLSPRIGVLRTLSTLTLKGNGITGEIPEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLS 146 (609)
Q Consensus 67 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 146 (609)
.|+.+.+.++... +-...|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++..-...|.+|++|+.+.|.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 4566666544332 555667778888888885 4555344556888888888888765 553445578888888888886
Q ss_pred CCcCCCCcCCCcCcccccccccCCCCccc
Q 007286 147 QNNFSGTIPDSLTTLSSLISIQLDSNNLS 175 (609)
Q Consensus 147 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 175 (609)
.+ ++..-..+|.++++|+.+++.+|...
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 54 66233457888888888888877543
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.40 E-value=0.064 Score=55.69 Aligned_cols=74 Identities=7% Similarity=0.034 Sum_probs=48.5
Q ss_pred cCcccccCCceEEEEEeCC--------CcEEEEEEeccCCCCchHHHHHHHHHHHHhccCCCc-ceeeeEeeCCCcceEE
Q 007286 289 KNVLGQGGFGKVYRGVLAD--------GTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNL-LRLIGFCTTPTERLLV 359 (609)
Q Consensus 289 ~~~LG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv 359 (609)
.+.+..|-...+|+....+ +..+++|+..... . ..-+..+|.++++.+...++ .++++.+ ....|
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~-~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I 148 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-G-KFYDSKVELDVFRYLSNINIAPNIIADF----PEGRI 148 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-c-hhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEE
Confidence 4567778889999999753 5789999864321 1 11223578888887764344 3455533 23789
Q ss_pred eecccCchh
Q 007286 360 YPFMQNLSV 368 (609)
Q Consensus 360 ~e~~~~gsL 368 (609)
++|++|.++
T Consensus 149 ~efI~G~~l 157 (424)
T 3mes_A 149 EEFIDGEPL 157 (424)
T ss_dssp EECCCSEEC
T ss_pred EEEeCCccC
Confidence 999998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.92 E-value=0.25 Score=50.87 Aligned_cols=30 Identities=27% Similarity=0.436 Sum_probs=25.4
Q ss_pred CeEecCCCCCcEEe------CCCCcEEEccccccee
Q 007286 408 KIIHRDVKAANVLL------DEDFEAVVGDFGLAKL 437 (609)
Q Consensus 408 ~ivH~Dlkp~NIll------~~~~~~kl~DfGla~~ 437 (609)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.93 E-value=0.67 Score=42.75 Aligned_cols=116 Identities=12% Similarity=0.098 Sum_probs=79.8
Q ss_pred cCCCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007286 339 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLEYLHEHCNPKIIHRDVKAAN 418 (609)
Q Consensus 339 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 418 (609)
.||++++. .+-.+.+...+.|+.-+.+.=...++. ++...+++++.+|+..-.+++.. +|--++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 57888866 455566666666665543222222333 78889999999999988777655 788899999
Q ss_pred EEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007286 419 VLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 490 (609)
Q Consensus 419 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~ 490 (609)
++++.++.+++.=.|+...+ +|. ..+...=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999866654322 222 11222234478889999999998774
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.95 E-value=1.5 Score=40.50 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=78.4
Q ss_pred cCCCcceeeeEeeCCCcceEEeecccCchhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 007286 339 VHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGEPVLDWVTRKRVALGAARGLE-YLHEHCNPKIIHRDVKAA 417 (609)
Q Consensus 339 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlkp~ 417 (609)
.||++ -..+-.+.+...+.|+.-+++.=...++. ++...+++++.+++.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57777 33444666777777766544433334433 788899999999988777 66654 78889999
Q ss_pred cEEeCCCCcEEEcccccceeeccCCcceeecccccccccCcccccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 007286 418 NVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 490 (609)
Q Consensus 418 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~elltg~~p~~ 490 (609)
|+++|.++.+++.-.|+-.. ++|.-+ +..-=.-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999986665432 333321 111223378888899999887764
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.43 E-value=0.11 Score=54.78 Aligned_cols=61 Identities=10% Similarity=0.005 Sum_probs=17.9
Q ss_pred ccCcccccCCceEEEEEeCC-CcEEEE------EEeccCC-CCchHHHHHHHHHHHHhccCCCcceeeeEee
Q 007286 288 EKNVLGQGGFGKVYRGVLAD-GTKVAV------KRLTDFE-SPGGDAAFQREVEMISVAVHRNLLRLIGFCT 351 (609)
Q Consensus 288 ~~~~LG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 351 (609)
..+.|| ||.||+|.+.. ..+||| |..+... +......|.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345676 99999999864 467899 7765422 2233457888999999999999999988764
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=76.43 E-value=0.11 Score=34.47 Aligned_cols=24 Identities=33% Similarity=0.426 Sum_probs=12.0
Q ss_pred EEEeeeechhhhhhccceeeeecc
Q 007286 222 IIVGIVGGLIVLISGGLLFFLCKG 245 (609)
Q Consensus 222 ii~~~~~~~~~l~~~~~~~~~~~~ 245 (609)
++.|+++|+++++++++.++++.|
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~R 36 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMR 36 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHHHHHHHhh
Confidence 445666666655544444333333
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=67.23 E-value=0.14 Score=33.85 Aligned_cols=22 Identities=41% Similarity=0.828 Sum_probs=11.4
Q ss_pred EEEeeeechhhhhhccceeeee
Q 007286 222 IIVGIVGGLIVLISGGLLFFLC 243 (609)
Q Consensus 222 ii~~~~~~~~~l~~~~~~~~~~ 243 (609)
++.|+++|+++++++++.++++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~ 33 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVY 33 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeehHHHHHHHHHHHHHHHH
Confidence 4446666666555444443333
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.12 E-value=23 Score=28.03 Aligned_cols=13 Identities=15% Similarity=0.217 Sum_probs=5.6
Q ss_pred CcCcccccccccC
Q 007286 157 SLTTLSSLISIQL 169 (609)
Q Consensus 157 ~~~~l~~L~~L~l 169 (609)
+|.++.+|+.+.+
T Consensus 38 aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 38 MFSGCTALEKLIL 50 (100)
T ss_dssp SSTTCTTCCCEEE
T ss_pred HHhccCCccEEEE
Confidence 3444444444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.77 E-value=60 Score=25.50 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=19.4
Q ss_pred CccccccccccccccccccccccCCccccCcccchhhhccC
Q 007286 107 PEELGNLSSLTSLDLDNNRLVGKIPPSLGNLKKLQFLTLSQ 147 (609)
Q Consensus 107 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 147 (609)
...|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 334555555555555443 2212233455555555555543
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=31.02 E-value=1.8 Score=28.16 Aligned_cols=14 Identities=29% Similarity=0.736 Sum_probs=7.0
Q ss_pred eEEEeeeechhhhh
Q 007286 221 GIIVGIVGGLIVLI 234 (609)
Q Consensus 221 ~ii~~~~~~~~~l~ 234 (609)
.++.++++|+++++
T Consensus 14 ~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 14 AVIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred EEEeehhHHHHHHH
Confidence 33445555555544
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.90 E-value=5.6e+02 Score=27.33 Aligned_cols=46 Identities=20% Similarity=0.117 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCcEEeCCCCcEEEcccccce
Q 007286 384 WVTRKRVALGAA--RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAK 436 (609)
Q Consensus 384 ~~~~~~i~~~ia--~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DfGla~ 436 (609)
+..+..++..+| ..+.|+=.- +|=.++|||++.+|++.=+|||..-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445555555544 345566433 5778999999999999999999874
Done!