BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007288
(609 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/594 (60%), Positives = 462/594 (77%), Gaps = 5/594 (0%)
Query: 18 IPPIIKQSLQSVKKSSIQSD--PPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPER 75
IP ++ SL++ S Q+ PP PK ILATNLI SYF++GL+EEAR+LFDEMP+R
Sbjct: 15 IPNFVRSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDR 74
Query: 76 DVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVH 135
DVV+WT MI GY S N + +AW F EMV+ +PN FTLSSVLK+C+ MK L+ ALVH
Sbjct: 75 DVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVH 134
Query: 136 GMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNG 195
G+ +K G+EGS+YV+N++M++YATC ++M+ A L+F D+K KNDV+WTTLITG+ H G+G
Sbjct: 135 GVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDG 194
Query: 196 YGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSI 255
GGL ++K+MLLE E+ PY +IAVRA AS V+ GK IHA+VIK GF SNLPVMNSI
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254
Query: 256 LDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSECLNMFSKMKSERFSPNCF 315
LD+YCR LS+A YF EM +KDLITWNT+I+ E+S SSE L MF + +S+ F PNC+
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCY 314
Query: 316 TFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEM 375
TFTS++AACA +AAL+CGQQ+H I RRG + N+ LANALIDMYAKCGNI DSQ++F E+
Sbjct: 315 TFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEI 374
Query: 376 SD-RDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEG 434
D R+LV+WTSMMIGYG+HG+G EA+ELFD+MV SG+RPDRIVFMAVL+AC HAGLV++G
Sbjct: 375 VDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKG 434
Query: 435 LKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACK 493
LKYF M ++Y +NP+++IY CVVDLLGRAG++ EAYEL++ MPFKPDES WG +LGACK
Sbjct: 435 LKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACK 494
Query: 494 EHRLPNL-GKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVG 552
H+ L +LAA +V++LKP M+GTY++LS IYAAEGKW +FA+ RK+MR MG+KKE G
Sbjct: 495 AHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAG 554
Query: 553 MSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLE 606
MSWI V ++V F +DKM + VY VL +LI E Y P++D L++D E
Sbjct: 555 MSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQE 608
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/553 (38%), Positives = 329/553 (59%), Gaps = 8/553 (1%)
Query: 59 EGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSV 118
E E A +FD+M E +VV+WT+MI +A F++MV + + FTLSSV
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 119 LKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI--SMDNARLVFNDMKW 176
AC +++LS +H AI+ GL VE SL+D+YA C S+D+ R VF+ M+
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 177 KNDVSWTTLITGYAHSGN-GYGGLGVFKEMLLEG-VEMNPYSFSIAVRACASTGWVSFGK 234
+ +SWT LITGY + N + +F EM+ +G VE N ++FS A +AC + GK
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 235 LIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG 294
+ K G SN V NS++ M+ + D + DA + F+ ++EK+L+++NT + G ++
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 295 SSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALAN 353
+ E + S++ + FTF S+++ A + ++ G+Q+H+ +V+ GL N + N
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 354 ALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRP 413
ALI MY+KCG+I + ++F+ M +R++++WTSM+ G+ HG +E F++M++ GV+P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 414 DRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYEL 472
+ + ++A+L+ACSH GLV EG ++F SM D+ + P E Y C+VDLL RAG + +A+E
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 473 IKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKW 532
I +MPF+ D VW LGAC+ H LGKLAA ++L+L PN YI LSNIYA GKW
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 533 EEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNET 592
EE + R+ M+ KE G SWIEV DK+ F D + +Y L+ LI +
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRC 753
Query: 593 AYEPDIDCLIHDL 605
Y PD D ++H L
Sbjct: 754 GYVPDTDLVLHKL 766
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 247/497 (49%), Gaps = 29/497 (5%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMP---ERDVVSWTVMIAGYTSFNCHNQAWTVFVE 102
S+L +LI Y G +A +F+ M +RDVVSW+ M+A Y + A VFVE
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 103 MVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEG-LEGSIYVENSLMDVYATCC 161
+ + PN + ++V++AC + + G +K G E + V SL+D++
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
S +NA VF+ M N V+WT +IT G + F +M+L G E + ++ S
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMY--CRFD-CLSDANQYFDEMTEK 278
ACA +S GK +H+ I+ G ++ S++DMY C D + D + FD M +
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 279 DLITWNTIIAGYEKSG--SSECLNMFSKMKSE-RFSPNCFTFTSIIAACATLAALSCGQQ 335
+++W +I GY K+ ++E +N+FS+M ++ PN FTF+S AC L+ G+Q
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 336 VHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGH 395
V +RGL N ++AN++I M+ K + D+Q+ F +S+++LV++ + + G + +
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 396 GKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGC 455
++A +L E+ + + F ++L+ ++ G + +G + + ++ N+ +
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 456 VVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLD----- 510
++ + + G + A + M + S W ++ +H A+RVL+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKHGF-------AIRVLETFNQM 566
Query: 511 ----LKPNMMGTYIILS 523
+KPN + ILS
Sbjct: 567 IEEGVKPNEVTYVAILS 583
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 214/415 (51%), Gaps = 19/415 (4%)
Query: 103 MVRNEVNP-NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
M R+ + P ++ T SS+LK+C + LVH I+ +E + NSL+ +Y+
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK-- 109
Query: 162 ISMDNARL--VFNDMKW---KNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYS 216
S D+A+ VF M+ ++ VSW+ ++ Y ++G + VF E L G+ N Y
Sbjct: 110 -SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC 168
Query: 217 FSIAVRACASTGWVSFGKLIHAAVIKHG-FGSNLPVMNSILDMYCRFD-CLSDANQYFDE 274
++ +RAC+++ +V G++ ++K G F S++ V S++DM+ + + +A + FD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 275 MTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCG 333
M+E +++TW +I + G E + F M F + FT +S+ +ACA L LS G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 334 QQVHAGIVRRGLDGNLALANALIDMYAKC---GNISDSQKIFSEMSDRDLVTWTSMMIGY 390
+Q+H+ +R GL ++ +L+DMYAKC G++ D +K+F M D +++WT+++ GY
Sbjct: 289 KQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 391 GAHGH-GKEAIELFDEMVKSG-VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNP 448
+ + EAI LF EM+ G V P+ F + AC + G + +
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 449 NKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKL 503
N + V+ + ++ R+++A +S+ K S L G C+ KL
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 130/249 (52%), Gaps = 7/249 (2%)
Query: 185 LITGYAHSGNGYGGLGVFKEMLLEGVE-MNPYSFSIAVRACASTGWVSFGKLIHAAVIKH 243
LI + ++G+ G + M +G+ M+ +FS +++C GKL+HA +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 244 GFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT---EKDLITWNTIIAGYEKSGSS-ECL 299
+ + NS++ +Y + + A F+ M ++D+++W+ ++A Y +G + +
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 300 NMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG-LDGNLALANALIDM 358
+F + PN + +T++I AC+ + G+ +++ G + ++ + +LIDM
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 359 YAKCGN-ISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIV 417
+ K N ++ K+F +MS+ ++VTWT M+ G +EAI F +MV SG D+
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 418 FMAVLTACS 426
+V +AC+
Sbjct: 272 LSSVFSACA 280
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 29/241 (12%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
LI Y G I+ A +F+ M R+V+SWT MI G+ + F +M+ V PN
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLE--GSIYVENSL---MDVYATCCIS--- 163
T ++L AC H + EG S+Y ++ + M+ YA C +
Sbjct: 575 EVTYVAILSACS-----------HVGLVSEGWRHFNSMYEDHKIKPKMEHYA-CMVDLLC 622
Query: 164 ----MDNARLVFNDMKWKNDV-SWTTLITG-YAHSGNGYGGLGVFKEMLLEGVEMNPYSF 217
+ +A N M ++ DV W T + HS G L K + L+ E Y
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 218 SIAVRACASTGWVSF---GKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDE 274
+ ACA S K+ ++K G S + V + I Y +A+Q +DE
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDE 742
Query: 275 M 275
+
Sbjct: 743 L 743
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 327/543 (60%), Gaps = 3/543 (0%)
Query: 62 IEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKA 121
+ EAR +FD MPERD+VSW ++AGY+ A + M + P+ T+ SVL A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 122 CKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVS 181
++ +S +HG A++ G + + + +L+D+YA C S++ AR +F+ M +N VS
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG-SLETARQLFDGMLERNVVS 304
Query: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241
W ++I Y + N + +F++ML EGV+ S A+ ACA G + G+ IH +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSS-ECLN 300
+ G N+ V+NS++ MYC+ + A F ++ + L++WN +I G+ ++G + LN
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 301 MFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYA 360
FS+M+S P+ FT+ S+I A A L+ + +H ++R LD N+ + AL+DMYA
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 361 KCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMA 420
KCG I ++ IF MS+R + TW +M+ GYG HG GK A+ELF+EM K ++P+ + F++
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 421 VLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
V++ACSH+GLV+ GLK F M + Y++ + + YG +VDLLGRAGR+ EA++ I MP K
Sbjct: 545 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
Query: 480 PDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFR 539
P +V+G +LGAC+ H+ N + AA R+ +L P+ G +++L+NIY A WE+ + R
Sbjct: 605 PAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVR 664
Query: 540 KIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDID 599
M G +K G S +E++++V F + ++ +Y LE LI H+ E Y PD +
Sbjct: 665 VSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTN 724
Query: 600 CLI 602
++
Sbjct: 725 LVL 727
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 232/472 (49%), Gaps = 13/472 (2%)
Query: 50 TNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVN 109
T L+ + G ++EA +F+ + + V + M+ G+ + ++A FV M ++V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 110 PNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARL 169
P + + +LK C L +HG+ +K G ++ L ++YA C ++ AR
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK-CRQVNEARK 191
Query: 170 VFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGW 229
VF+ M ++ VSW T++ GY+ +G L + K M E ++ + + + A ++
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 230 VSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAG 289
+S GK IH ++ GF S + + +++DMY + L A Q FD M E+++++WN++I
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 290 Y-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGN 348
Y + E + +F KM E P + + ACA L L G+ +H V GLD N
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 349 LALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVK 408
+++ N+LI MY KC + + +F ++ R LV+W +M++G+ +G +A+ F +M
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 409 SGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKE 468
V+PD +++V+TA + + + ++ N + +VD+ + G +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 469 AYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLD------LKPN 514
A LI M + + W ++ H GK AAL + + +KPN
Sbjct: 492 A-RLIFDMMSERHVTTWNAMIDGYGTH---GFGK-AALELFEEMQKGTIKPN 538
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 213/420 (50%), Gaps = 9/420 (2%)
Query: 105 RNEVNPNAFTLSS--VLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI 162
RN + N + + +L+ C +K L + + K GL + + L+ ++
Sbjct: 28 RNYIPANVYEHPAALLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYG- 83
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
S+D A VF + K +V + T++ G+A + L F M + VE Y+F+ ++
Sbjct: 84 SVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLK 143
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
C + GK IH ++K GF +L M + +MY + +++A + FD M E+DL++
Sbjct: 144 VCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVS 203
Query: 283 WNTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
WNTI+AGY ++G + L M M E P+ T S++ A + L +S G+++H +
Sbjct: 204 WNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM 263
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIE 401
R G D + ++ AL+DMYAKCG++ ++++F M +R++V+W SM+ Y + + KEA+
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 402 LFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLG 461
+F +M+ GV+P + M L AC+ G ++ G K + ++ N + ++ +
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 462 RAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHR-LPNLGKLAALRVLDLKPNMMGTYI 520
+ V A + + + S +LG + R + L + +R +KP+ TY+
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF-TYV 442
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 169/355 (47%), Gaps = 25/355 (7%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
++T L+ Y G +E AR LFD M ER+VVSW MI Y +A +F +M+
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
V P ++ L AC + L +H ++++ GL+ ++ V NSL+ +Y C +D A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCK-CKEVDTA 391
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
+F ++ + VSW +I G+A +G L F +M V+ + +++ + A A
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
K IH V++ N+ V +++DMY + + A FD M+E+ + TWN +I
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 288 AGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL- 345
GY G L +F +M+ PN TF S+I+AC+ H+G+V GL
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACS-----------HSGLVEAGLK 560
Query: 346 -----------DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIG 389
+ ++ A++D+ + G ++++ +M + V M+G
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/552 (36%), Positives = 328/552 (59%), Gaps = 4/552 (0%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ +L+ Y ++ AR +FDEM ERDV+SW +I GY S + +VFV+M+ +
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
+ + T+ SV C + +S VH + +K N+L+D+Y+ C +D+A
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG-DLDSA 350
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
+ VF +M ++ VS+T++I GYA G + +F+EM EG+ + Y+ + + CA
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ GK +H + ++ G ++ V N+++DMY + + +A F EM KD+I+WNTII
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 288 AGYEKSG-SSECLNMFSKMKSE-RFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
GY K+ ++E L++F+ + E RFSP+ T ++ ACA+L+A G+++H I+R G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
+ +AN+L+DMYAKCG + + +F +++ +DLV+WT M+ GYG HG GKEAI LF++
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAG 464
M ++G+ D I F+++L ACSH+GLVDEG ++F M ++ + P E Y C+VD+L R G
Sbjct: 591 MRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTG 650
Query: 465 RVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSN 524
+ +AY I++MP PD ++WG LL C+ H L + A +V +L+P G Y++++N
Sbjct: 651 DLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMAN 710
Query: 525 IYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEM 584
IYA KWE+ + RK + G +K G SWIE++ +V F+A D T+ + L
Sbjct: 711 IYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRK 770
Query: 585 LIRHMNETAYEP 596
+ M E Y P
Sbjct: 771 VRARMIEEGYSP 782
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 233/436 (53%), Gaps = 3/436 (0%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
S L + L Y + G ++EA +FDE+ + W +++ + + +F +M+
Sbjct: 129 SNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
+ V +++T S V K+ ++S+ +HG +K G V NSL+ Y +D
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK-NQRVD 247
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
+AR VF++M ++ +SW ++I GY +G GL VF +ML+ G+E++ + CA
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
+ +S G+ +H+ +K F N++LDMY + L A F EM+++ ++++ +
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 286 IIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
+IAGY + G + E + +F +M+ E SP+ +T T+++ CA L G++VH I
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
L ++ ++NAL+DMYAKCG++ +++ +FSEM +D+++W +++ GY + + EA+ LF+
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 405 EMVKSG-VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
+++ PD VL AC+ D+G + + ++ + +VD+ +
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 464 GRVKEAYELIKSMPFK 479
G + A+ L + K
Sbjct: 548 GALLLAHMLFDDIASK 563
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 215/390 (55%), Gaps = 13/390 (3%)
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENS----LMDVYATCCI 162
+++P TL SVL+ C KSL + G + + G+ +V +S + + T C
Sbjct: 91 DIDPR--TLCSVLQLCADSKSLKD-----GKEVDNFIRGNGFVIDSNLGSKLSLMYTNCG 143
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
+ A VF+++K + + W L+ A SG+ G +G+FK+M+ GVEM+ Y+FS +
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
+ +S V G+ +H ++K GFG V NS++ Y + + A + FDEMTE+D+I+
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 283 WNTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
WN+II GY +G +E L++F +M + T S+ A CA +S G+ VH+ V
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIE 401
+ N L+DMY+KCG++ ++ +F EMSDR +V++TSM+ GY G EA++
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 402 LFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLG 461
LF+EM + G+ PD AVL C+ L+DEG + + + + ++ + + ++D+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 462 RAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
+ G ++EA EL+ S D W ++G
Sbjct: 444 KCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 170/368 (46%), Gaps = 52/368 (14%)
Query: 211 EMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQ 270
+++P + ++ CA + + GK + + +GF + + + + MY L +A++
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 271 YFDEMTEKDLITWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAA 329
FDE+ + + WN ++ KSG S + +F KM S + +TF+ + + ++L +
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 330 LSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIG 389
+ G+Q+H I++ G ++ N+L+ Y K + ++K+F EM++RD+++W S++ G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 390 YGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLV------------------ 431
Y ++G ++ + +F +M+ SG+ D ++V C+ + L+
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 432 -----------------DEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIK 474
D F+ M+D +V Y ++ R G EA +L +
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS----YTSMIAGYAREGLAGEAVKLFE 386
Query: 475 SMP---FKPDESVWGPLLGACKEHRLPNLGKLAALRVLD-LKPNMMGTYIILSN----IY 526
M PD +L C +RL + GK RV + +K N +G I +SN +Y
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGK----RVHEWIKENDLGFDIFVSNALMDMY 442
Query: 527 AAEGKWEE 534
A G +E
Sbjct: 443 AKCGSMQE 450
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 332/582 (57%), Gaps = 41/582 (7%)
Query: 60 GLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVL 119
G ++EA +LF MPERD +W M++G+ + +A F M + N ++ +SVL
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 120 KACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKND 179
AC G+ ++ VH + K +Y+ ++L+D+Y+ C ++++A+ VF++M +N
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG-NVNDAQRVFDEMGDRNV 218
Query: 180 VSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAA 239
VSW +LIT + +G L VF+ ML VE + + + + ACAS + G+ +H
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 240 VIKHG-FGSNLPVMNSILDMYCRFDCLSDANQYFD------------------------- 273
V+K+ +++ + N+ +DMY + + +A FD
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 274 ------EMTEKDLITWNTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACAT 326
+M E+++++WN +IAGY ++G +E L++F +K E P ++F +I+ ACA
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 327 LAALSCGQQVHAGIVRRGL------DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDL 380
LA L G Q H +++ G + ++ + N+LIDMY KCG + + +F +M +RD
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 381 VTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKS 440
V+W +M+IG+ +G+G EA+ELF EM++SG +PD I + VL+AC HAG V+EG YF S
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 441 MN-DYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPN 499
M D+ V P ++ Y C+VDLLGRAG ++EA +I+ MP +PD +WG LL ACK HR
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 500 LGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVR 559
LGK A ++L+++P+ G Y++LSN+YA GKWE+ RK MR G K+ G SWI+++
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 560 DKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCL 601
F+ DK + ++ +L++LI M +I L
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSL 680
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 192/421 (45%), Gaps = 47/421 (11%)
Query: 40 LIPKGPSI----LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQ 95
LI K P + + + L+ Y G + +A+ +FDEM +R+VVSW +I + +
Sbjct: 177 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVE 236
Query: 96 AWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIK-EGLEGSIYVENSLM 154
A VF M+ + V P+ TL+SV+ AC + ++ VHG +K + L I + N+ +
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 155 DVYATC------------------------------CISMDNARLVFNDMKWKNDVSWTT 184
D+YA C S ARL+F M +N VSW
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 185 LITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHG 244
LI GY +G L +F + E V YSF+ ++ACA + G H V+KHG
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 245 FG------SNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSE 297
F ++ V NS++DMY + C+ + F +M E+D ++WN +I G+ ++G +E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 298 CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR-GLDGNLALANALI 356
L +F +M P+ T +++AC + G+ + + R G+ ++
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 357 DMYAKCGNISDSQKIFSEMS-DRDLVTWTSMMIGYGAHGH---GKEAIELFDEMVKSGVR 412
D+ + G + +++ + EM D V W S++ H + GK E E+ S
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596
Query: 413 P 413
P
Sbjct: 597 P 597
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 151/281 (53%), Gaps = 33/281 (11%)
Query: 232 FGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYE 291
+ + +HA+VIK GF + + + N ++D Y + L D Q FD+M ++++ TWN+++ G
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 292 KSG--------------------------------SSECLNMFSKMKSERFSPNCFTFTS 319
K G E L F+ M E F N ++F S
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 320 IIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRD 379
+++AC+ L ++ G QVH+ I + ++ + +AL+DMY+KCGN++D+Q++F EM DR+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 380 LVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLK-YF 438
+V+W S++ + +G EA+++F M++S V PD + +V++AC+ + G + +
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 439 KSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
+ + + + + + VD+ + R+KEA + SMP +
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 41/247 (16%)
Query: 317 FTSIIAAC--ATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSE 374
F ++ +C + L+A+ + VHA +++ G + + N LID Y+KCG++ D +++F +
Sbjct: 22 FAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDK 80
Query: 375 -------------------------------MSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
M +RD TW SM+ G+ H +EA+ F
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
M K G + F +VL+ACS +++G++ + + I +VD+ +
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 464 GRVKEAYELIKSMPFKPDESV--WGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYII 521
G V +A + M D +V W L+ C E P + L +++ L+ + +
Sbjct: 201 GNVNDAQRVFDEM---GDRNVVSWNSLI-TCFEQNGPAVEALDVFQMM-LESRVEPDEVT 255
Query: 522 LSNIYAA 528
L+++ +A
Sbjct: 256 LASVISA 262
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/639 (34%), Positives = 339/639 (53%), Gaps = 72/639 (11%)
Query: 41 IPKGPSILATNLIKSYFDEGLIEEARTLFDEMP--ERDVVSWTVMIAGYTSFNCHNQAWT 98
I + I T ++ Y G I AR +F++ P RD V + MI G++ N A
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 99 VFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAAL-VHGMAIKEGLEGSIYVENSLMDVY 157
+F +M P+ FT +SVL + + H A+K G V N+L+ VY
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 158 ATCCIS---MDNARLVFNDMKWKNDVSWTTLITGYAHSG--------------------- 193
+ C S + +AR VF+++ K++ SWTT++TGY +G
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 194 ----NGYGGLGVFKE-------MLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIK 242
+GY G ++E M+ G+E++ +++ +RACA+ G + GK +HA V++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 243 HGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-------- 294
S NS++ +Y + +A F++M KDL++WN +++GY SG
Sbjct: 315 REDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 295 ------------------------SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAAL 330
E L +FS MK E F P + F+ I +CA L A
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 331 SCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGY 390
GQQ HA +++ G D +L+ NALI MYAKCG + +++++F M D V+W +++
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 391 GAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPN 449
G HGHG EA+++++EM+K G+RPDRI + VLTACSHAGLVD+G KYF SM Y + P
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 450 KEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVL 509
+ Y ++DLL R+G+ +A +I+S+PFKP +W LL C+ H LG +AA ++
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 510 DLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIAND 569
L P GTY++LSN++AA G+WEE A+ RK+MR G KKEV SWIE+ +V F+ +D
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 570 KMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
+ VY L+ L + M Y PD ++HD+E +
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESD 712
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 206/485 (42%), Gaps = 115/485 (23%)
Query: 119 LKACKGMK--SLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKW 176
L+ C ++ SL A VHG I G + ++ N L+DVY ++ AR +F+++
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS-ELNYARQLFDEISE 77
Query: 177 KNDVSWTT---------------------------------LITGYAHSGNGYGGLGVFK 203
+ ++ TT +ITG++H+ +GY + +F
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 204 EMLLEGVEMNPYSFS-----IAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDM 258
+M EG + + ++F+ +A+ A V F HAA +K G G V N+++ +
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF----HAAALKSGAGYITSVSNALVSV 193
Query: 259 YCRF----DCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-------------------- 294
Y + L A + FDE+ EKD +W T++ GY K+G
Sbjct: 194 YSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVA 253
Query: 295 -------------SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
E L M +M S + FT+ S+I ACAT L G+QVHA ++
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGH------ 395
RR D + N+L+ +Y KCG +++ IF +M +DLV+W +++ GY + GH
Sbjct: 314 RRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 396 -------------------------GKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGL 430
G+E ++LF M + G P F + +C+ G
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 431 VDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLG 490
G +Y + + + ++ + + G V+EA ++ ++MP D W L+
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIA 491
Query: 491 ACKEH 495
A +H
Sbjct: 492 ALGQH 496
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 213/492 (43%), Gaps = 74/492 (15%)
Query: 23 KQSLQSVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTV 82
KQ +Q ++++S I + L + K L+ AR +FDE+ E+D SWT
Sbjct: 166 KQCVQ-FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTT 224
Query: 83 --------------------------------MIAGYTSFNCHNQAWTVFVEMVRNEVNP 110
MI+GY + + +A + MV + +
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 111 NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLV 170
+ FT SV++AC L VH ++ + S + +NSL+ +Y C D AR +
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCG-KFDEARAI 342
Query: 171 FNDMKWKNDVSWTTLITGYAHSG-----------------------------NGYG--GL 199
F M K+ VSW L++GY SG NG+G GL
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 200 GVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMY 259
+F M EG E Y+FS A+++CA G G+ HA ++K GF S+L N+++ MY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 260 CRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFT 318
+ + +A Q F M D ++WN +IA + G +E ++++ +M + P+ T
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 319 SIIAACATLAALSCGQQVHAGI--VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMS 376
+++ AC+ + G++ + V R G A LID+ + G SD++ + +
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR-LIDLLCRSGKFSDAESVIESLP 581
Query: 377 DRDLV-TWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRI-VFMAVLTACSHAGLVDEG 434
+ W +++ G HG+ + I D++ G+ P+ +M + + G +E
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 435 LKYFKSMNDYNV 446
+ K M D V
Sbjct: 640 ARVRKLMRDRGV 651
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 321/565 (56%), Gaps = 4/565 (0%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
L T LI + G I AR +FD++P + W +I GY+ N A ++ M
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
V+P++FT +LKAC G+ L VH + G + ++V+N L+ +YA C + +
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKC-RRLGS 172
Query: 167 ARLVFNDMKW--KNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
AR VF + + VSWT +++ YA +G L +F +M V+ + + + A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
+ G+ IHA+V+K G ++ S+ MY + ++ A FD+M +LI WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 285 TIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
+I+GY K+G + E ++MF +M ++ P+ + TS I+ACA + +L + ++ + R
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
++ +++ALIDM+AKCG++ ++ +F DRD+V W++M++GYG HG +EAI L+
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
M + GV P+ + F+ +L AC+H+G+V EG +F M D+ +NP ++ Y CV+DLLGRA
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILS 523
G + +AYE+IK MP +P +VWG LL ACK+HR LG+ AA ++ + P+ G Y+ LS
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLS 532
Query: 524 NIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLE 583
N+YAA W+ A+ R M+ G K+VG SW+EVR ++ F DK + + +E
Sbjct: 533 NLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVE 592
Query: 584 MLIRHMNETAYEPDIDCLIHDLEGE 608
+ + E + + D +HDL E
Sbjct: 593 WIESRLKEGGFVANKDASLHDLNDE 617
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 134/259 (51%), Gaps = 4/259 (1%)
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
K IHA ++ G + ++ ++ F ++ A Q FD++ + WN II GY ++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 294 GS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALA 352
+ L M+S M+ R SP+ FTF ++ AC+ L+ L G+ VHA + R G D ++ +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 353 NALIDMYAKCGNISDSQKIFS--EMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSG 410
N LI +YAKC + ++ +F + +R +V+WT+++ Y +G EA+E+F +M K
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 411 VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAY 470
V+PD + ++VL A + + +G S+ + ++ + + + G+V A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 471 ELIKSMPFKPDESVWGPLL 489
L M P+ +W ++
Sbjct: 278 ILFDKMK-SPNLILWNAMI 295
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 104/213 (48%), Gaps = 12/213 (5%)
Query: 317 FTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMS 376
+ S+I + A L +Q+HA ++ GL + L LI + G+I+ ++++F ++
Sbjct: 24 YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 377 DRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLK 436
+ W +++ GY + H ++A+ ++ M + V PD F +L ACS GL +
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS--GLSHLQMG 138
Query: 437 YFKSMNDYNVNPNKEIY--GCVVDLLGRAGRVKEAYELIKSMPFKPDESV--WGPLLGAC 492
F + + + +++ ++ L + R+ A + + +P P+ ++ W ++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAY 197
Query: 493 KEHRLP--NLGKLAALRVLDLKPNMMGTYIILS 523
++ P L + +R +D+KP+ + +L+
Sbjct: 198 AQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/600 (34%), Positives = 337/600 (56%), Gaps = 36/600 (6%)
Query: 41 IPKGPSILA-TNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTV 99
IP+ P++ + NL+ +Y GLI E + F+++P+RD V+W V+I GY+ A
Sbjct: 67 IPQ-PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 100 FVEMVRN-EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYA 158
+ M+R+ N TL ++LK +S +HG IK G E + V + L+ +YA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 159 TC-CIS-----------------------------MDNARLVFNDMKWKNDVSWTTLITG 188
CIS +++A +F M+ K+ VSW +I G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKG 244
Query: 189 YAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSN 248
A +G + F+EM ++G++M+ Y F + AC G ++ GK IHA +I+ F +
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 249 LPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKS 307
+ V ++++DMYC+ CL A FD M +K++++W ++ GY ++G + E + +F M+
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 308 ERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISD 367
P+ +T I+ACA +++L G Q H + GL + ++N+L+ +Y KCG+I D
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 368 SQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSH 427
S ++F+EM+ RD V+WT+M+ Y G E I+LFD+MV+ G++PD + V++ACS
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484
Query: 428 AGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWG 486
AGLV++G +YFK M ++Y + P+ Y C++DL R+GR++EA I MPF PD W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 487 PLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMG 546
LL AC+ +GK AA +++L P+ Y +LS+IYA++GKW+ A+ R+ MR
Sbjct: 545 TLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKN 604
Query: 547 SKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLE 606
KKE G SWI+ + K+ F A+D+ + +Y LE L + + Y+PD + HD+E
Sbjct: 605 VKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVE 664
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 211/449 (46%), Gaps = 45/449 (10%)
Query: 80 WTVMIAGYTSFNCHNQAWTVFVEMVRNEV-----NPNAFTLSSVLKACKGMKSLSNAALV 134
++V I NQ + +V+M+ + P F ++++ A MKS + A V
Sbjct: 6 YSVQIKQCIGLGARNQ--SRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 135 HGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGN 194
+ L + N+L+ Y+ + + F + ++ V+W LI GY+ SG
Sbjct: 64 FDRIPQPNL----FSWNNLLLAYSKAGL-ISEMESTFEKLPDRDGVTWNVLIEGYSLSGL 118
Query: 195 GYGGLGVFKEMLLE-GVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMN 253
+ + M+ + + + ++ +S G VS GK IH VIK GF S L V +
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 254 SILDMYCRFDCLSDANQYF----DEMT--------------------------EKDLITW 283
+L MY C+SDA + F D T EKD ++W
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSW 238
Query: 284 NTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
+I G ++G + E + F +MK + + + F S++ AC L A++ G+Q+HA I+R
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR 298
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
++ + +ALIDMY KC + ++ +F M +++V+WT+M++GYG G +EA+++
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358
Query: 403 FDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGR 462
F +M +SG+ PD ++AC++ ++EG ++ + + +V L G+
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGA 491
G + ++ L M + D W ++ A
Sbjct: 419 CGDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/626 (34%), Positives = 340/626 (54%), Gaps = 69/626 (11%)
Query: 51 NLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNP 110
++ +Y G ++ FD++P+RD VSWT MI GY + +++A V +MV+ + P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 111 NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC---------- 160
FTL++VL + + + VH +K GL G++ V NSL+++YA C
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 161 --------------------CISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLG 200
MD A F M ++ V+W ++I+G+ G L
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 201 VFKEMLLEGVEMNPYSFSIA--VRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDM 258
+F +ML + + ++P F++A + ACA+ + GK IH+ ++ GF + V+N+++ M
Sbjct: 265 IFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 259 YCR------------------------------FDCLSDANQ---YFDEMTEKDLITWNT 285
Y R + L D NQ F + ++D++ W
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 286 IIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
+I GYE+ GS E +N+F M PN +T ++++ ++LA+LS G+Q+H V+ G
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMS-DRDLVTWTSMMIGYGAHGHGKEAIELF 403
+++++NALI MYAK GNI+ + + F + +RD V+WTSM+I HGH +EA+ELF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYN-VNPNKEIYGCVVDLLGR 462
+ M+ G+RPD I ++ V +AC+HAGLV++G +YF M D + + P Y C+VDL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIIL 522
AG ++EA E I+ MP +PD WG LL AC+ H+ +LGK+AA R+L L+P G Y L
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Query: 523 SNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVL 582
+N+Y+A GKWEE AK RK M+ KKE G SWIEV+ KV F D +Y +
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Query: 583 EMLIRHMNETAYEPDIDCLIHDLEGE 608
+ + + + Y PD ++HDLE E
Sbjct: 684 KKIWDEIKKMGYVPDTASVLHDLEEE 709
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 151/571 (26%), Positives = 255/571 (44%), Gaps = 143/571 (25%)
Query: 110 PNAFTLSSVLKACKGM--KSLS------NAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
P +LS++L+ C + KS++ A LVH IK GL S+Y+ N+LM+VY+
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 162 ISMDNARLVFNDM------KW-------------------------KNDVSWTTLITGYA 190
++ +AR +F++M W ++ VSWTT+I GY
Sbjct: 64 YAL-HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 191 HSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLP 250
+ G + + V +M+ EG+E ++ + + + A+T + GK +H+ ++K G N+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 251 VMNSILDMYCR----------FD--CLSDANQY-------------------FDEMTEKD 279
V NS+L+MY + FD + D + + F++M E+D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 280 LITWNTIIAGYEKSGSS-ECLNMFSKM-KSERFSPNCFTFTSIIAACATLAALSCGQQVH 337
++TWN++I+G+ + G L++FSKM + SP+ FT S+++ACA L L G+Q+H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQK--------------------------- 370
+ IV G D + + NALI MY++CG + +++
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 371 ------IFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTA 424
IF + DRD+V WT+M++GY HG EAI LF MV G RP+ A+L+
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 425 CS-----------HAGLVDEG------------LKYFKSMNDYNVNPNKEIYGCVVDL-- 459
S H V G Y K+ N + + ++ C D
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 460 -------LGRAGRVKEAYELIKSM---PFKPDESVWGPLLGACKEHRLPNLGK--LAALR 507
L + G +EA EL ++M +PD + + AC L N G+ ++
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 508 VLDLKPNMMGTYIILSNIYAAEGKWEEFAKF 538
+D + Y + +++ G +E +F
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 132/245 (53%), Gaps = 8/245 (3%)
Query: 50 TNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVN 109
T L+ Y G + +A+ +F + +RDVV+WT MI GY + +A +F MV
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 110 PNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARL 169
PN++TL+++L + SLS+ +HG A+K G S+ V N+L+ +YA ++ +A
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG-NITSASR 469
Query: 170 VFNDMKWKND-VSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTG 228
F+ ++ + D VSWT++I A G+ L +F+ ML+EG+ + ++ AC G
Sbjct: 470 AFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAG 529
Query: 229 WVSFGKLIHAAVIKHGFGSNLPVMNS---ILDMYCRFDCLSDANQYFDEM-TEKDLITWN 284
V+ G+ + +P ++ ++D++ R L +A ++ ++M E D++TW
Sbjct: 530 LVNQGRQYFDMM--KDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 285 TIIAG 289
++++
Sbjct: 588 SLLSA 592
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 314/540 (58%), Gaps = 7/540 (1%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
LI SY G + A LF+ MP ++++SWT +++GY H +A +F M + + P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMDNARLV 170
+ SS+L +C + +L VH IK L YV NSL+D+YA C C++ +AR V
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT--DARKV 407
Query: 171 FNDMKWKNDVSWTTLITGYAHSGNGYG---GLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
F+ + V + +I GY+ G + L +F++M + + +F +RA AS
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ K IH + K+G ++ ++++D+Y CL D+ FDEM KDL+ WN++
Sbjct: 468 TSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 288 AGY-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLD 346
AGY ++S + E LN+F +++ R P+ FTF +++ A LA++ GQ+ H +++RGL+
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 347 GNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM 406
N + NAL+DMYAKCG+ D+ K F + RD+V W S++ Y HG GK+A+++ ++M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 407 VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRV 466
+ G+ P+ I F+ VL+ACSHAGLV++GLK F+ M + + P E Y C+V LLGRAGR+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRL 707
Query: 467 KEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIY 526
+A ELI+ MP KP VW LL C + L + AA + P G++ +LSNIY
Sbjct: 708 NKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIY 767
Query: 527 AAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLI 586
A++G W E K R+ M+ G KE G SWI + +V F++ DK +Y VL+ L+
Sbjct: 768 ASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 238/452 (52%), Gaps = 6/452 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ T LI Y +G I+ AR +FD +PE+ V+WT MI+G + +F +++ +
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
V P+ + LS+VL AC + L +H ++ GLE + N L+D Y C +
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
+L FN M KN +SWTTL++GY + + +F M G++ + Y+ S + +CAS
Sbjct: 305 KL-FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ FG +HA IK G++ V NS++DMY + DCL+DA + FD D++ +N +I
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 288 AGYEKSGSS----ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
GY + G+ E LN+F M+ P+ TF S++ A A+L +L +Q+H + +
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKY 483
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
GL+ ++ +ALID+Y+ C + DS+ +F EM +DLV W SM GY +EA+ LF
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
E+ S RPD F ++TA + V G ++ + + N I ++D+ +
Sbjct: 544 LELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKC 603
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
G ++A++ S + D W ++ + H
Sbjct: 604 GSPEDAHKAFDSAASR-DVVCWNSVISSYANH 634
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 243/454 (53%), Gaps = 13/454 (2%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
+ L+ LI Y G + AR +F++MPER++VSW+ M++ + ++ VF+E R
Sbjct: 79 TYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWR 138
Query: 106 NEVN-PNAFTLSSVLKACKGMKSLSNAAL--VHGMAIKEGLEGSIYVENSLMDVYATCCI 162
+ PN + LSS ++AC G+ + + +K G + +YV L+D Y
Sbjct: 139 TRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDG- 197
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
++D ARLVF+ + K+ V+WTT+I+G G Y L +F +++ + V + Y S +
Sbjct: 198 NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLS 257
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
AC+ ++ GK IHA ++++G + +MN ++D Y + + A++ F+ M K++I+
Sbjct: 258 ACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS 317
Query: 283 WNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
W T+++GY+++ E + +F+ M P+ + +SI+ +CA+L AL G QVHA +
Sbjct: 318 WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTI 377
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGY---GAHGHGKE 398
+ L + + N+LIDMYAKC ++D++K+F + D+V + +M+ GY G E
Sbjct: 378 KANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHE 437
Query: 399 AIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGL--KYFKSMNDYNVNPNKEIYGCV 456
A+ +F +M +RP + F+++L A A L GL + M Y +N + +
Sbjct: 438 ALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSAL 495
Query: 457 VDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLG 490
+D+ +K++ + M K D +W +
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFA 528
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 183/343 (53%), Gaps = 9/343 (2%)
Query: 133 LVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHS 192
+VHG I GLE Y+ N L+++Y+ M AR VF M +N VSW+T+++ H
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAG-GMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 193 GNGYGGLGVFKEMLLEGVEM-NPYSFSIAVRACASTG----WVSFGKLIHAAVIKHGFGS 247
G L VF E + N Y S ++AC+ W+ F + + ++K GF
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ--LQSFLVKSGFDR 181
Query: 248 NLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSEC-LNMFSKMK 306
++ V ++D Y + + A FD + EK +TW T+I+G K G S L +F ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 307 SERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNIS 366
+ P+ + +++++AC+ L L G+Q+HA I+R GL+ + +L N LID Y KCG +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 367 DSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACS 426
+ K+F+ M ++++++WT+++ GY + KEA+ELF M K G++PD ++LT+C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 427 HAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEA 469
+ G + N+ + + ++D+ + + +A
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDA 404
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 184/374 (49%), Gaps = 10/374 (2%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCH---NQAWTVFVE 102
S + +LI Y + +AR +FD DVV + MI GY+ ++A +F +
Sbjct: 385 SYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRD 444
Query: 103 MVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI 162
M + P+ T S+L+A + SL + +HG+ K GL I+ ++L+DVY+ C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN-CY 503
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
+ ++RLVF++MK K+ V W ++ GY L +F E+ L + ++F+ V
Sbjct: 504 CLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVT 563
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
A + V G+ H ++K G N + N++LDMY + DA++ FD +D++
Sbjct: 564 AAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVC 623
Query: 283 WNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
WN++I+ Y G + L M KM SE PN TF +++AC+ + G + ++
Sbjct: 624 WNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML 683
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRD-LVTWTSMMIGYGAHGHGKEAI 400
R G++ ++ + + G ++ ++++ +M + + W S++ G G+ +
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN----V 739
Query: 401 ELFDEMVKSGVRPD 414
EL + + + D
Sbjct: 740 ELAEHAAEMAILSD 753
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 159/314 (50%), Gaps = 7/314 (2%)
Query: 217 FSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT 276
F+ ++ AS + + ++H +I G + + N ++++Y R + A + F++M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 277 EKDLITWNTIIAGYEKSG-SSECLNMFSKM-KSERFSPNCFTFTSIIAACATLAALSCGQ 334
E++L++W+T+++ G E L +F + ++ + SPN + +S I AC+ L
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 335 --QVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGA 392
Q+ + +V+ G D ++ + LID Y K GNI ++ +F + ++ VTWT+M+ G
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 393 HGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEI 452
G +++LF ++++ V PD + VL+ACS ++ G + + Y + + +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 453 YGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPN--LGKLAALRVLD 510
++D + GRV A++L MP K S W LL K++ L + ++
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS-WTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 511 LKPNMMGTYIILSN 524
LKP+M IL++
Sbjct: 346 LKPDMYACSSILTS 359
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 325/598 (54%), Gaps = 53/598 (8%)
Query: 62 IEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEV--NPNAFTLSSVL 119
+ +AR +FDEM DVVSW +I Y A +F M NE P+ TL +VL
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT-NEFGCRPDNITLVNVL 236
Query: 120 KACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKND 179
C + + S +H A+ + +++V N L+D+YA C + MD A VF++M K+
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM-MDEANTVFSNMSVKDV 295
Query: 180 VSWTTL-----------------------------------ITGYAHSGNGYGGLGVFKE 204
VSW + I+GYA G GY LGV ++
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 205 MLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKH-------GFGSNLPVMNSILD 257
ML G++ N + + CAS G + GK IH IK+ G G V+N ++D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 258 MYCRFDCLSDANQYFDEMT--EKDLITWNTIIAGYEKSG-SSECLNMFSKMKSE--RFSP 312
MY + + A FD ++ E+D++TW +I GY + G +++ L + S+M E + P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 313 NCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDG-NLALANALIDMYAKCGNISDSQKI 371
N FT + + ACA+LAAL G+Q+HA +R + L ++N LIDMYAKCG+ISD++ +
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLV 535
Query: 372 FSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLV 431
F M ++ VTWTS+M GYG HG+G+EA+ +FDEM + G + D + + VL ACSH+G++
Sbjct: 536 FDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMI 595
Query: 432 DEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLG 490
D+G++YF M + V+P E Y C+VDLLGRAGR+ A LI+ MP +P VW L
Sbjct: 596 DQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
Query: 491 ACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKE 550
C+ H LG+ AA ++ +L N G+Y +LSN+YA G+W++ + R +MR G KK
Sbjct: 656 CCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKR 715
Query: 551 VGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
G SW+E F DK H + +Y VL ++ + + Y P+ +HD++ E
Sbjct: 716 PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDE 773
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 248/558 (44%), Gaps = 81/558 (14%)
Query: 4 KRLLSYAATFHCHKIPPIIKQSLQSVKKSSIQSDPPLIPKGPSI---------------- 47
+RLL A H+ IK SL S I PP I K +I
Sbjct: 3 RRLLIPNAAAKSHQY---IKVSLFSTSAPEIT--PPFIHKCKTISQVKLIHQKLLSFGIL 57
Query: 48 ---LATNLIKSYFDEGLIEEARTLFDEMPERD--VVSWTVMIAGYTSFNCHNQAWTVFVE 102
L ++LI +Y G + A +L P D V W +I Y C N+ +F
Sbjct: 58 TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGL 117
Query: 103 MVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI 162
M P+ +T V KAC + S+ H +++ G +++V N+L+ +Y+ C
Sbjct: 118 MHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSR-CR 176
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLE-GVEMNPYSFSIAV 221
S+ +AR VF++M + VSW ++I YA G L +F M E G + + +
Sbjct: 177 SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
CAS G S GK +H + N+ V N ++DMY + + +AN F M+ KD++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 282 TWNTIIAGYEKSGSSE-CLNMFSKMKSER------------------------------- 309
+WN ++AGY + G E + +F KM+ E+
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 310 ----FSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL--------DGNLALANALID 357
PN T S+++ CA++ AL G+++H ++ + D N+ + N LID
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVI-NQLID 415
Query: 358 MYAKCGNISDSQKIFSEMS--DRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSG--VRP 413
MYAKC + ++ +F +S +RD+VTWT M+ GY HG +A+EL EM + RP
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 414 DRIVFMAVLTACSHAGLVDEG--LKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYE 471
+ L AC+ + G + + N N P + C++D+ + G + +A
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARL 534
Query: 472 LIKSMPFKPDESVWGPLL 489
+ +M K +E W L+
Sbjct: 535 VFDNMMAK-NEVTWTSLM 551
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 45 PSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMV 104
P ++ LI Y G I +AR +FD M ++ V+WT ++ GY +A +F EM
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 105 RNEVNPNAFTLSSVLKAC-------KGMKSLSNAALVHGMA 138
R + TL VL AC +GM+ + V G++
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 309/549 (56%), Gaps = 3/549 (0%)
Query: 62 IEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKA 121
IE A F E +VV W VM+ Y + ++ +F +M E+ PN +T S+LK
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 122 CKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVS 181
C + L +H IK + + YV + L+D+YA +D A + K+ VS
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG-KLDTAWDILIRFAGKDVVS 558
Query: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241
WTT+I GY L F++ML G+ + + AV ACA + G+ IHA
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSE-CLN 300
GF S+LP N+++ +Y R + ++ F++ D I WN +++G+++SG++E L
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 301 MFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYA 360
+F +M E N FTF S + A + A + G+QVHA I + G D + NALI MYA
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 361 KCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMA 420
KCG+ISD++K F E+S ++ V+W +++ Y HG G EA++ FD+M+ S VRP+ + +
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 421 VLTACSHAGLVDEGLKYFKSMN-DYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
VL+ACSH GLVD+G+ YF+SMN +Y ++P E Y CVVD+L RAG + A E I+ MP K
Sbjct: 799 VLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIK 858
Query: 480 PDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFR 539
PD VW LL AC H+ +G+ AA +L+L+P TY++LSN+YA KW+ R
Sbjct: 859 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTR 918
Query: 540 KIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDID 599
+ M+ G KKE G SWIEV++ + F D+ ++ + L + +E Y D
Sbjct: 919 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Query: 600 CLIHDLEGE 608
L+++L+ E
Sbjct: 979 SLLNELQHE 987
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 229/453 (50%), Gaps = 3/453 (0%)
Query: 43 KGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVE 102
+ +++ LI Y G ++ AR +FD + +D SW MI+G + C +A +F +
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 103 MVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI 162
M + P + SSVL ACK ++SL +HG+ +K G YV N+L+ +Y
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG- 337
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
++ +A +F++M ++ V++ TLI G + G G + +FK M L+G+E + + + V
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
AC++ G + G+ +HA K GF SN + ++L++Y + + A YF E ++++
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 283 WNTIIAGYE-KSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
WN ++ Y +F +M+ E PN +T+ SI+ C L L G+Q+H+ I+
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIE 401
+ N + + LIDMYAK G + + I + +D+V+WT+M+ GY + +A+
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 402 LFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLG 461
F +M+ G+R D + ++AC+ + EG + + + +V L
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 462 RAGRVKEAYELIKSMPFKPDESVWGPLLGACKE 494
R G+++E+Y L D W L+ ++
Sbjct: 638 RCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQ 669
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 229/465 (49%), Gaps = 4/465 (0%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
L+ L Y +G + A +FDEMPER + +W MI S N + + +FV MV
Sbjct: 122 LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN 181
Query: 108 VNPNAFTLSSVLKACKGMK-SLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
V PN T S VL+AC+G + +H + +GL S V N L+D+Y+ +D
Sbjct: 182 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGF-VDL 240
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
AR VF+ ++ K+ SW +I+G + + + +F +M + G+ PY+FS + AC
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
+ G+ +H V+K GF S+ V N+++ +Y L A F M+++D +T+NT+
Sbjct: 301 IESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTL 360
Query: 287 IAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
I G + G E + +F +M + P+ T S++ AC+ L GQQ+HA + G
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF 420
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
N + AL+++YAKC +I + F E ++V W M++ YG + + +F +
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGR 465
M + P++ + ++L C G ++ G + + N N + ++D+ + G+
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 466 VKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLD 510
+ A++++ K D W ++ ++ + ++LD
Sbjct: 541 LDTAWDILIRFAGK-DVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 9/377 (2%)
Query: 101 VEMVRNE-VNPNAFTLSSVLKAC-KGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYA 158
++ V N + PN TL +L+ C K SL +H +K GL+ + + L D Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 159 TCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGL-GVFKEMLLEGVEMNPYSF 217
+ A VF++M + +W +I A S N G + G+F M+ E V N +F
Sbjct: 132 FKG-DLYGAFKVFDEMPERTIFTWNKMIKELA-SRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 218 SIAVRACASTGWVSFG--KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEM 275
S + AC G V+F + IHA ++ G + V N ++D+Y R + A + FD +
Sbjct: 190 SGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 276 TEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQ 334
KD +W +I+G K+ +E + +F M P + F+S+++AC + +L G+
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 335 QVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHG 394
Q+H +++ G + + NAL+ +Y GN+ ++ IFS MS RD VT+ +++ G G
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 395 HGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYG 454
+G++A+ELF M G+ PD +++ ACS G + G + N +I G
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 455 CVVDLLGRAGRVKEAYE 471
+++L + ++ A +
Sbjct: 429 ALLNLYAKCADIETALD 445
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
L+ Y G IEE+ F++ D ++W +++G+ + +A VFV M R ++ N
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVF 171
FT S +KA ++ VH + K G + V N+L+ +YA C S+ +A F
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG-SISDAEKQF 750
Query: 172 NDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS 231
++ KN+VSW +I Y+ G G L F +M+ V N + + AC+ G V
Sbjct: 751 LEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 810
Query: 232 FG-KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEK-DLITWNTIIAG 289
G + ++G ++DM R LS A ++ EM K D + W T+++
Sbjct: 811 KGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 316/565 (55%), Gaps = 36/565 (6%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
S L L+++Y + AR +FDE+PER+V+ VMI Y + + + VF M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG 133
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
V P+ +T VLKAC ++ +HG A K GL +++V N L+ +Y C +
Sbjct: 134 CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGF-LS 192
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
ARLV ++M ++ VSW +L+ GYA + L V +EM E V+++ + ++A
Sbjct: 193 EARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM--ESVKISHDAGTMA----- 245
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
L+ A SN N MY + F +M +K L++WN
Sbjct: 246 --------SLLPAV-------SNTTTENV---MYVK--------DMFFKMGKKSLVSWNV 279
Query: 286 IIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
+I Y K+ E + ++S+M+++ F P+ + TS++ AC +ALS G+++H I R+
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
L NL L NALIDMYAKCG + ++ +F M RD+V+WT+M+ YG G G +A+ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 405 EMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRA 463
++ SG+ PD I F+ L ACSHAGL++EG FK M D Y + P E C+VDLLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILS 523
G+VKEAY I+ M +P+E VWG LLGAC+ H ++G LAA ++ L P G Y++LS
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Query: 524 NIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLE 583
NIYA G+WEE R IM+ G KK G S +EV + F+ D+ + +Y L+
Sbjct: 520 NIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELD 579
Query: 584 MLIRHMNETAYEPDIDCLIHDLEGE 608
+L++ M E Y PD + +HD+E E
Sbjct: 580 VLVKKMKELGYVPDSESALHDVEEE 604
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 39/392 (9%)
Query: 101 VEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC 160
+E+ + F L VL +++L VH I E L + + LM YA+
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTLRT---VHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 161 CISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIA 220
+ +AR VF+++ +N + +I Y ++G G+ VF M V + Y+F
Sbjct: 88 -KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCV 146
Query: 221 VRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDL 280
++AC+ +G + G+ IH + K G S L V N ++ MY + LS+A DEM+ +D+
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 281 ITWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAG 339
++WN+++ GY ++ + L + +M+S + S + T S++ A +
Sbjct: 207 VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS-------------- 252
Query: 340 IVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEA 399
N N MY K +F +M + LV+W M+ Y + EA
Sbjct: 253 --------NTTTENV---MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 400 IELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDL 459
+EL+ M G PD + +VL AC + G K + + PN + ++D+
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 460 LGRAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
+ G +++A ++ ++M + D W ++ A
Sbjct: 354 YAKCGCLEKARDVFENMKSR-DVVSWTAMISA 384
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 153/328 (46%), Gaps = 14/328 (4%)
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
+ +H+ +I N + ++ Y ++ A + FDE+ E+++I N +I Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 294 G-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALA 352
G E + +F M P+ +TF ++ AC+ + G+++H + GL L +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 353 NALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVR 412
N L+ MY KCG +S+++ + EMS RD+V+W S+++GY + +A+E+ EM +
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 413 PDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYEL 472
D ++L A S+ E + Y K M + + ++ + + EA EL
Sbjct: 239 HDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 473 IKSMP---FKPDESVWGPLLGACKEHRLPNLGKL--AALRVLDLKPNMMGTYIILSNIYA 527
M F+PD +L AC + +LGK + L PN++ ++ ++YA
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI-DMYA 355
Query: 528 AEGKWEEFAKFRKIMRGMGSKKEVGMSW 555
G E K R + M S+ V SW
Sbjct: 356 KCGCLE---KARDVFENMKSRDVV--SW 378
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 313/536 (58%), Gaps = 4/536 (0%)
Query: 64 EARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACK 123
+AR +FDEM RD VS+ MI GY ++ +F+E + ++ P+ T+SSVL+AC
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACG 318
Query: 124 GMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWT 183
++ LS A ++ +K G V N L+DVYA C M AR VFN M+ K+ VSW
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG-DMITARDVFNSMECKDTVSWN 377
Query: 184 TLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKH 243
++I+GY SG+ + +FK M++ + + ++ + + + FGK +H+ IK
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 244 GFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECLNMF 302
G +L V N+++DMY + + D+ + F M D +TWNT+I+ + G + L +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 303 SKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKC 362
++M+ P+ TF + CA+LAA G+++H ++R G + L + NALI+MY+KC
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 363 GNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVL 422
G + +S ++F MS RD+VTWT M+ YG +G G++A+E F +M KSG+ PD +VF+A++
Sbjct: 558 GCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 423 TACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPD 481
ACSH+GLVDEGL F+ M Y ++P E Y CVVDLL R+ ++ +A E I++MP KPD
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD 677
Query: 482 ESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKI 541
S+W +L AC+ + + R+++L P+ G I+ SN YAA KW++ + RK
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 542 MRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPD 597
++ K G SWIEV V F + D ++ +Y LE+L M + Y PD
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 228/441 (51%), Gaps = 4/441 (0%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
L+ Y GL+ AR +FDEMP RD+VSW +I+GY+S + +A ++ E+ + + P+
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVF 171
+FT+SSVL A + + +HG A+K G+ + V N L+ +Y D AR VF
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD-ARRVF 265
Query: 172 NDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS 231
++M ++ VS+ T+I GY + +F E L+ + + + S +RAC +S
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRACGHLRDLS 324
Query: 232 FGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYE 291
K I+ ++K GF V N ++D+Y + + A F+ M KD ++WN+II+GY
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 292 KSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLA 350
+SG E + +F M + T+ +I+ LA L G+ +H+ ++ G+ +L+
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 351 LANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSG 410
++NALIDMYAKCG + DS KIFS M D VTW +++ G +++ +M KS
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 411 VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAY 470
V PD F+ L C+ G + + + +I ++++ + G ++ +
Sbjct: 505 VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSS 564
Query: 471 ELIKSMPFKPDESVWGPLLGA 491
+ + M + D W ++ A
Sbjct: 565 RVFERMS-RRDVVTWTGMIYA 584
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 224/425 (52%), Gaps = 12/425 (2%)
Query: 73 PERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAA 132
P ++V W +I ++ +A + ++ ++V+P+ +T SV+KAC G+
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 133 LVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHS 192
LV+ + G E ++V N+L+D+Y+ + + AR VF++M ++ VSW +LI+GY+
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGL-LTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 193 GNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVM 252
G L ++ E+ + + ++ S + A + V G+ +H +K G S + V
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 253 NSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEK-SGSSECLNMFSKMKSERFS 311
N ++ MY +F +DA + FDEM +D +++NT+I GY K E + MF + ++F
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFK 304
Query: 312 PNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKI 371
P+ T +S++ AC L LS + ++ +++ G + N LID+YAKCG++ ++ +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 372 FSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLV 431
F+ M +D V+W S++ GY G EA++LF M+ + D I ++ +++ + L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR--LA 422
Query: 432 DEGLKYFKSMNDYNVNP----NKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGP 487
D LK+ K ++ + + + ++D+ + G V ++ ++ SM D W
Sbjct: 423 D--LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNT 479
Query: 488 LLGAC 492
++ AC
Sbjct: 480 VISAC 484
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 181/371 (48%), Gaps = 3/371 (0%)
Query: 120 KACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKND 179
+A +L+ +H + I GL+ S + L+D Y+ + + KN
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 180 VSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAA 239
W ++I ++ +G L + ++ V + Y+F ++ACA G L++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 240 VIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSEC 298
++ GF S+L V N+++DMY R L+ A Q FDEM +DL++WN++I+GY G E
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 299 LNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDM 358
L ++ ++K+ P+ FT +S++ A L + GQ +H ++ G++ + + N L+ M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 359 YAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVF 418
Y K +D++++F EM RD V++ +M+ GY +E++ +F E + +PD +
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTV 310
Query: 419 MAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPF 478
+VL AC H + + M + ++D+ + G + A ++ SM
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 479 KPDESVWGPLL 489
K D W ++
Sbjct: 371 K-DTVSWNSII 380
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 334/577 (57%), Gaps = 17/577 (2%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
S + L+ Y G + ++ L RD+V+W +++ +A EMV
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEG-LEGSIYVENSLMDVYATCCISM 164
V P+ FT+SSVL AC ++ L +H A+K G L+ + +V ++L+D+Y C +
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLE-GVEMNPYSFSIAVRA 223
+ R VF+ M + W +I GY+ + + L +F M G+ N + + V A
Sbjct: 356 -SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
C +G S + IH V+K G + V N+++DMY R + A + F +M ++DL+TW
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 284 NTIIAGYEKSGSSE-CLNMFSKMKS-ER----------FSPNCFTFTSIIAACATLAALS 331
NT+I GY S E L + KM++ ER PN T +I+ +CA L+AL+
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 332 CGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYG 391
G+++HA ++ L ++A+ +AL+DMYAKCG + S+K+F ++ ++++TW +++ YG
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 392 AHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMN-DYNVNPNK 450
HG+G+EAI+L M+ GV+P+ + F++V ACSH+G+VDEGL+ F M DY V P+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 451 EIYGCVVDLLGRAGRVKEAYELIKSMPFKPDES-VWGPLLGACKEHRLPNLGKLAALRVL 509
+ Y CVVDLLGRAGR+KEAY+L+ MP +++ W LLGA + H +G++AA ++
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 510 DLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIAND 569
L+PN+ Y++L+NIY++ G W++ + R+ M+ G +KE G SWIE D+V F+A D
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 570 KMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLE 606
++ + G LE L M + Y PD C++H++E
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVE 811
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 224/449 (49%), Gaps = 19/449 (4%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+A L+ Y G +FD + ER+ VSW +I+ SF A F M+
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194
Query: 108 VNPNAFTLSSVLKACKGM---KSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISM 164
V P++FTL SV+ AC + + L VH +++G E + ++ N+L+ +Y +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLG-KL 252
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
+++++ ++ V+W T+++ + L +EM+LEGVE + ++ S + AC
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPAC 312
Query: 225 ASTGWVSFGKLIHAAVIKHG-FGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
+ + GK +HA +K+G N V ++++DMYC + + FD M ++ + W
Sbjct: 313 SHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLW 372
Query: 284 NTIIAGYEKS-GSSECLNMFSKM-KSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIV 341
N +IAGY ++ E L +F M +S N T ++ AC A S + +H +V
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIE 401
+RGLD + + N L+DMY++ G I + +IF +M DRDLVTW +M+ GY H ++A+
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 402 LFDEM-----------VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNK 450
L +M + ++P+ I M +L +C+ + +G + N+ +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 451 EIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
+ +VD+ + G ++ + ++ +P K
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 232/508 (45%), Gaps = 29/508 (5%)
Query: 80 WTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAI 139
W ++ N +A +V+M+ + P+ + ++LKA ++ + +H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 140 KEGLE-GSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGG 198
K G S+ V N+L+++Y C VF+ + +N VSW +LI+
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 199 LGVFKEMLLEGVEMNPYSFSIAVRACASTGW---VSFGKLIHAAVIKHGFGSNLPVMNSI 255
L F+ ML E VE + ++ V AC++ + GK +HA ++ G N ++N++
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 256 LDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGY-EKSGSSECLNMFSKMKSERFSPNC 314
+ MY + L+ + +DL+TWNT+++ + E L +M E P+
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 315 FTFTSIIAACATLAALSCGQQVHAGIVRRG-LDGNLALANALIDMYAKCGNISDSQKIFS 373
FT +S++ AC+ L L G+++HA ++ G LD N + +AL+DMY C + +++F
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 374 EMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKS-GVRPDRIVFMAVLTACSHAGLVD 432
M DR + W +M+ GY + H KEA+ LF M +S G+ + V+ AC +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFS 422
Query: 433 EGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLL--- 489
+ ++ ++ + ++D+ R G++ A + M + D W ++
Sbjct: 423 RKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITGY 481
Query: 490 --------GACKEHRLPNLGK---LAALRVLDLKPNMMGTYIILSNIYA--AEGKWEEFA 536
H++ NL + A RV LKPN + IL + A A K +E
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRV-SLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 537 KFRKIMRGMGSKKEVGMSWIEVRDKVCG 564
+ I + + VG + +++ K CG
Sbjct: 541 AY-AIKNNLATDVAVGSALVDMYAK-CG 566
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/599 (35%), Positives = 335/599 (55%), Gaps = 41/599 (6%)
Query: 49 ATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEV 108
A+ +I Y + L+ EA LF + V++W +I +T + ++A FVEM +
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 109 NPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYA---------- 158
P+ SVLK+C M L VHG ++ G++ +Y N+LM++YA
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 159 -----------------------TCCI--SMDNARLVFNDMKWKNDVSWTTLITGYAHSG 193
TC + +D+ R VF M K+ VS+ T+I GYA SG
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 194 NGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSF--GKLIHAAVIKHGFGSNLPV 251
L + +EM ++ P SF+++ + +V GK IH VI+ G S++ +
Sbjct: 222 MYEDALRMVREM--GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 252 MNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECLNMFSKMKSERF 310
+S++DMY + + D+ + F + +D I+WN+++AGY ++G +E L +F +M + +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 311 SPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQK 370
P F+S+I ACA LA L G+Q+H ++R G N+ +A+AL+DMY+KCGNI ++K
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 371 IFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGL 430
IF M+ D V+WT++++G+ HGHG EA+ LF+EM + GV+P+++ F+AVLTACSH GL
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 431 VDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLL 489
VDE YF SM Y +N E Y V DLLGRAG+++EAY I M +P SVW LL
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLL 519
Query: 490 GACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKK 549
+C H+ L + A ++ + MG Y+++ N+YA+ G+W+E AK R MR G +K
Sbjct: 520 SSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRK 579
Query: 550 EVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
+ SWIE+++K GF++ D+ + L+ ++ M + Y D ++HD++ E
Sbjct: 580 KPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEE 638
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 214/469 (45%), Gaps = 45/469 (9%)
Query: 115 LSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDM 174
+ +++K +KS S A +H I+ + + S++ T + A L+F +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTL 65
Query: 175 KWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGK 234
K ++W ++I + L F EM G + F +++C + FG+
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 235 LIHAAVIKHGFGSNLPVMNSILDMYCR-------------FD------------------ 263
+H +++ G +L N++++MY + FD
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 264 C-----LSDANQYFDEMTEKDLITWNTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTF 317
C + + F+ M KD++++NTIIAGY +SG E L M +M + P+ FT
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 318 TSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSD 377
+S++ + + G+++H ++R+G+D ++ + ++L+DMYAK I DS+++FS +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC 305
Query: 378 RDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKY 437
RD ++W S++ GY +G EA+ LF +MV + V+P + F +V+ AC+H + G +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 438 FKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLL--GACKEH 495
+ N I +VD+ + G +K A ++ M DE W ++ A H
Sbjct: 366 HGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGH 424
Query: 496 RLPNLGKLAALRVLDLKPNMMGTYIIL---SNIYAAEGKWEEFAKFRKI 541
+ ++ +KPN + +L S++ + W F K+
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 473
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 12 TFHCHKIPPIIKQSLQSVKKSSIQSDPPLIPKGPS---ILATNLIKSYFDEGLIEEARTL 68
+F + PI + + +K I +I KG + ++L+ Y IE++ +
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHG--YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 69 FDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSL 128
F + RD +SW ++AGY +N+A +F +MV +V P A SSV+ AC + +L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 129 SNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITG 188
+HG ++ G +I++ ++L+D+Y+ C ++ AR +F+ M ++VSWT +I G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG-NIKAARKIFDRMNVLDEVSWTAIIMG 418
Query: 189 YAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIK-HGFGS 247
+A G+G+ + +F+EM +GV+ N +F + AC+ G V ++ K +G
Sbjct: 419 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQ 478
Query: 248 NLPVMNSILDMYCRFDCLSDANQYFDEM-TEKDLITWNTIIA 288
L ++ D+ R L +A + +M E W+T+++
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 372 bits (954), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 319/564 (56%), Gaps = 7/564 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
++ +LI Y G + +AR LFD+ + VV+W MI+GY + +A +F M N
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
V + + +SV+K C +K L +H +K G + +LM Y+ C +D
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
RL N VSWT +I+G+ + + +F EM +GV N +++S+ + A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP-- 408
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
V +HA V+K + + V ++LD Y + + +A + F + +KD++ W+ ++
Sbjct: 409 --VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 288 AGYEKSGSSEC-LNMFSKMKSERFSPNCFTFTSIIAACA-TLAALSCGQQVHAGIVRRGL 345
AGY ++G +E + MF ++ PN FTF+SI+ CA T A++ G+Q H ++ L
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
D +L +++AL+ MYAK GNI ++++F ++DLV+W SM+ GY HG +A+++F E
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAG 464
M K V+ D + F+ V AC+HAGLV+EG KYF M D + P KE C+VDL RAG
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 465 RVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSN 524
++++A ++I++MP ++W +L AC+ H+ LG+LAA +++ +KP Y++LSN
Sbjct: 647 QLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSN 706
Query: 525 IYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEM 584
+YA G W+E AK RK+M KKE G SWIEV++K F+A D+ +Y LE
Sbjct: 707 MYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLED 766
Query: 585 LIRHMNETAYEPDIDCLIHDLEGE 608
L + + YEPD ++ D++ E
Sbjct: 767 LSTRLKDLGYEPDTSYVLQDIDDE 790
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 248/451 (54%), Gaps = 9/451 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ T+L+ +Y ++ R +FDEM ER+VV+WT +I+GY + +++ T+F+ M
Sbjct: 130 VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
PN+FT ++ L VH + +K GL+ +I V NSL+++Y C ++ A
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCG-NVRKA 248
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
R++F+ + K+ V+W ++I+GYA +G LG+F M L V ++ SF+ ++ CA+
Sbjct: 249 RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEM-TEKDLITWNTI 286
+ F + +H +V+K+GF + + +++ Y + + DA + F E+ ++++W +
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 287 IAGY-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
I+G+ + G E +++FS+MK + PN FT++ I+ A ++ +VHA +V+
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNY 424
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
+ + + AL+D Y K G + ++ K+FS + D+D+V W++M+ GY G + AI++F E
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGL-VDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAG 464
+ K G++P+ F ++L C+ + +G ++ ++ + + ++ + + G
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG 544
Query: 465 RVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
++ A E+ K K D W ++ +H
Sbjct: 545 NIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 217/428 (50%), Gaps = 8/428 (1%)
Query: 65 ARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKG 124
A LFD+ P RD S+ ++ G++ +A +F+ + R + + SSVLK
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 125 MKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTT 184
+ +H IK G + V SL+D Y + + R VF++MK +N V+WTT
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS-NFKDGRKVFDEMKERNVVTWTT 164
Query: 185 LITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHG 244
LI+GYA + L +F M EG + N ++F+ A+ A G G +H V+K+G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 245 FGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFS 303
+PV NS++++Y + + A FD+ K ++TWN++I+GY +G E L MF
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 304 KMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCG 363
M+ + +F S+I CA L L +Q+H +V+ G + + AL+ Y+KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 364 NISDSQKIFSEMS-DRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVL 422
+ D+ ++F E+ ++V+WT+M+ G+ + +EA++LF EM + GVRP+ + +L
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 423 TACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDE 482
TA + + K+ N + + ++D + G+V+EA ++ + K D
Sbjct: 405 TALPVISPSEVHAQVVKT----NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DI 459
Query: 483 SVWGPLLG 490
W +L
Sbjct: 460 VAWSAMLA 467
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 146/263 (55%), Gaps = 1/263 (0%)
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
NA +F+ ++ S+ +L+ G++ G +F + G+EM+ FS ++ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
+ FG+ +H IK GF ++ V S++D Y + D + FDEM E++++TW T
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 286 IIAGYEK-SGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
+I+GY + S + E L +F +M++E PN FTF + + A G QVH +V+ G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
LD + ++N+LI++Y KCGN+ ++ +F + + +VTW SM+ GY A+G EA+ +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 405 EMVKSGVRPDRIVFMAVLTACSH 427
M + VR F +V+ C++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 4/247 (1%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
S + T L+ +Y G +EEA +F + ++D+V+W+ M+AGY A +F E+ +
Sbjct: 428 STVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Query: 106 NEVNPNAFTLSSVLKACKGMK-SLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISM 164
+ PN FT SS+L C S+ HG AIK L+ S+ V ++L+ +YA ++
Sbjct: 488 GGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKG-NI 546
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
++A VF + K+ VSW ++I+GYA G L VFKEM V+M+ +F AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNS-ILDMYCRFDCLSDANQYFDEMTEKDLIT- 282
G V G+ +++ + NS ++D+Y R L A + + M T
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 283 WNTIIAG 289
W TI+A
Sbjct: 667 WRTILAA 673
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/566 (33%), Positives = 323/566 (57%), Gaps = 9/566 (1%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
+L +N++K YF +E+AR +FD MPE+D + W MI+GY + ++ VF +++
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 107 E-VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC-ISM 164
+ TL +L A ++ L +H +A K G YV + +Y+ C I M
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
+A +F + + + V++ +I GY +G L +FKE++L G + S V
Sbjct: 275 GSA--LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---STLVSLV 329
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
+G + IH +K F S+ V ++ +Y + + + A + FDE EK L +WN
Sbjct: 330 PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 285 TIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
+I+GY ++G +E +++F +M+ FSPN T T I++ACA L ALS G+ VH +
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRST 449
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
+ ++ ++ ALI MYAKCG+I++++++F M+ ++ VTW +M+ GYG HG G+EA+ +F
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIF 509
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGR 462
EM+ SG+ P + F+ VL ACSHAGLV EG + F SM + Y P+ + Y C+VD+LGR
Sbjct: 510 YEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGR 569
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIIL 522
AG ++ A + I++M +P SVW LLGAC+ H+ NL + + ++ +L P+ +G +++L
Sbjct: 570 AGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLL 629
Query: 523 SNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVL 582
SNI++A+ + + A R+ + K G + IE+ + F + D+ + +Y L
Sbjct: 630 SNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKL 689
Query: 583 EMLIRHMNETAYEPDIDCLIHDLEGE 608
E L M E Y+P+ + +HD+E E
Sbjct: 690 EKLEGKMREAGYQPETELALHDVEEE 715
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 212/451 (47%), Gaps = 8/451 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN- 106
L T L + D G I AR +F + DV + V++ G++ + + +VF + ++
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKST 113
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
++ PN+ T + + A G + ++HG A+ +G + + + ++++ +Y +++
Sbjct: 114 DLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFW-RVED 172
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEG-VEMNPYSFSIAVRACA 225
AR VF+ M K+ + W T+I+GY + + VF++++ E ++ + + A A
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
+ G IH+ K G S+ V+ + +Y + + + F E + D++ +N
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 286 IIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
+I GY +G +E L++F ++ T S++ L + +H ++
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSN 349
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
+ +++ AL +Y+K I ++K+F E ++ L +W +M+ GY +G ++AI LF
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 405 EMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAG 464
EM KS P+ + +L+AC+ G + G + + + + ++ + + G
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 465 RVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
+ EA L M K +E W ++ H
Sbjct: 470 SIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 208/466 (44%), Gaps = 43/466 (9%)
Query: 123 KGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSW 182
K S+S+ A H I G I + L + ++ AR +F ++ + +
Sbjct: 28 KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLG-AIYYARDIFLSVQRPDVFLF 86
Query: 183 TTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS--FGKLIHAAV 240
L+ G++ + + + L VF L + ++ P S + A A++G+ G++IH
Sbjct: 87 NVLMRGFSVNESPHSSLSVFAH-LRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 241 IKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECL 299
+ G S L + ++I+ MY +F + DA + FD M EKD I WNT+I+GY K+ E +
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 300 NMFSKMKSERFSP-NCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDM 358
+F + +E + + T I+ A A L L G Q+H+ + G + + I +
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 359 YAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVF 418
Y+KCG I +F E D+V + +M+ GY ++G + ++ LF E++ SG R
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 419 MAVLTAC-------------------SHAGLVDEGLKYFKSMND-------YNVNPNKEI 452
++++ SHA + + +N+ ++ +P K +
Sbjct: 326 VSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSL 385
Query: 453 --YGCVVDLLGRAGRVKEAYELIKSMP---FKPDESVWGPLLGACKEHRLPNLGKLA--A 505
+ ++ + G ++A L + M F P+ +L AC + +LGK
Sbjct: 386 PSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDL 445
Query: 506 LRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEV 551
+R D + ++ + ++ +YA G A+ R++ M K EV
Sbjct: 446 VRSTDFESSIYVSTALI-GMYAKCGS---IAEARRLFDLMTKKNEV 487
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/622 (33%), Positives = 345/622 (55%), Gaps = 42/622 (6%)
Query: 22 IKQSLQSVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWT 81
+KQ+ + ++ SDP K + A + S+ +E AR +FDE+P+ + +W
Sbjct: 46 LKQTHGHMIRTGTFSDPYSASK---LFAMAALSSF---ASLEYARKVFDEIPKPNSFAWN 99
Query: 82 VMIAGYTSFNCHNQAWTVFVEMV-RNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIK 140
+I Y S + F++MV ++ PN +T ++KA + SLS +HGMA+K
Sbjct: 100 TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 141 EGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLG 200
+ ++V NSL+ Y +C +D+A VF +K K+ VSW ++I G+ G+ L
Sbjct: 160 SAVGSDVFVANSLIHCYFSCG-DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 201 VFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYC 260
+FK+M E V+ + + + ACA + FG+ + + + ++ NL + N++LDMY
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 261 RFDCLSDANQYFDEMTEKD-------------------------------LITWNTIIAG 289
+ + DA + FD M EKD ++ WN +I+
Sbjct: 279 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISA 338
Query: 290 YEKSGS-SECLNMFSKMKSER-FSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDG 347
YE++G +E L +F +++ ++ N T S ++ACA + AL G+ +H+ I + G+
Sbjct: 339 YEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM 398
Query: 348 NLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMV 407
N + +ALI MY+KCG++ S+++F+ + RD+ W++M+ G HG G EA+++F +M
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 408 KSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRV 466
++ V+P+ + F V ACSH GLVDE F M ++Y + P ++ Y C+VD+LGR+G +
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYL 518
Query: 467 KEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIY 526
++A + I++MP P SVWG LLGACK H NL ++A R+L+L+P G +++LSNIY
Sbjct: 519 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIY 578
Query: 527 AAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLI 586
A GKWE ++ RK MR G KKE G S IE+ + F++ D ++ VYG L ++
Sbjct: 579 AKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVM 638
Query: 587 RHMNETAYEPDIDCLIHDLEGE 608
+ YEP+I ++ +E E
Sbjct: 639 EKLKSNGYEPEISQVLQIIEEE 660
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 229/469 (48%), Gaps = 56/469 (11%)
Query: 106 NEVNPNAFTLS-------SVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYA 158
N NPN T + S+++ C ++ L HG I+ G Y + L + A
Sbjct: 17 NFSNPNQPTTNNERSRHISLIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAA 73
Query: 159 TCCI-SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEG-VEMNPYS 216
S++ AR VF+++ N +W TLI YA + + F +M+ E N Y+
Sbjct: 74 LSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 217 FSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDC--LSDANQYFDE 274
F ++A A +S G+ +H +K GS++ V NS++ +C F C L A + F
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI--HCYFSCGDLDSACKVFTT 191
Query: 275 MTEKDLITWNTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCG 333
+ EKD+++WN++I G+ + GS + L +F KM+SE + T +++ACA + L G
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG 251
Query: 334 QQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYG-- 391
+QV + I ++ NL LANA++DMY KCG+I D++++F M ++D VTWT+M+ GY
Sbjct: 252 RQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAIS 311
Query: 392 -----------------------------AHGHGKEAIELFDEM-VKSGVRPDRIVFMAV 421
+G EA+ +F E+ ++ ++ ++I ++
Sbjct: 312 EDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVST 371
Query: 422 LTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPD 481
L+AC+ G ++ G + + + N + ++ + + G ++++ E+ S+ K D
Sbjct: 372 LSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRD 430
Query: 482 ESVWGPLLGACKEHRLPN--LGKLAALRVLDLKPNMMGTYIILSNIYAA 528
VW ++G H N + ++ ++KPN + +N++ A
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG----VTFTNVFCA 475
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 363 bits (933), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 309/543 (56%), Gaps = 4/543 (0%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
LI Y G ++ AR LFD MP RD++SW MI+GY ++ +F M V+P+
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVF 171
TL+SV+ AC+ + +H I G I V NSL +Y S A +F
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAG-SWREAEKLF 355
Query: 172 NDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS 231
+ M+ K+ VSWTT+I+GY ++ + ++ M + V+ + + + + ACA+ G +
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 232 FGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYE 291
G +H IK S + V N++++MY + C+ A F + K++I+W +IIAG
Sbjct: 416 TGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 292 KSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLA 350
+ E L +MK PN T T+ +AACA + AL CG+++HA ++R G+ +
Sbjct: 476 LNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDF 534
Query: 351 LANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSG 410
L NAL+DMY +CG ++ + F+ +D+ +W ++ GY G G +ELFD MVKS
Sbjct: 535 LPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR 593
Query: 411 VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAY 470
VRPD I F+++L CS + +V +GL YF M DY V PN + Y CVVDLLGRAG ++EA+
Sbjct: 594 VRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 471 ELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEG 530
+ I+ MP PD +VWG LL AC+ H +LG+L+A + +L +G YI+L N+YA G
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 531 KWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMN 590
KW E AK R++M+ G + G SW+EV+ KV F+++DK T+ + VLE M+
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Query: 591 ETA 593
E
Sbjct: 774 EVG 776
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 227/450 (50%), Gaps = 6/450 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMV-RN 106
L + + G + +A +F +M ER++ SW V++ GY ++A ++ M+
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
V P+ +T VL+ C G+ L+ VH ++ G E I V N+L+ +Y C + +
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG-DVKS 249
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
ARL+F+ M ++ +SW +I+GY +G + GL +F M V+ + + + + AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
G G+ IHA VI GF ++ V NS+ MY +A + F M KD+++W T+
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 287 IAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
I+GYE + + ++ + M + P+ T ++++ACATL L G ++H ++ L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
+ +AN LI+MY+KC I + IF + +++++WTS++ G + EA+ +F
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLR 488
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGR 465
+K ++P+ I A L AC+ G + G + + V + + ++D+ R GR
Sbjct: 489 QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGR 548
Query: 466 VKEAYELIKSMPFKPDESVWGPLLGACKEH 495
+ A+ S K D + W LL E
Sbjct: 549 MNTAWSQFNSQ--KKDVTSWNILLTGYSER 576
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 187/341 (54%), Gaps = 5/341 (1%)
Query: 101 VEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC 160
++ +R V+ + F ++++ C+ ++ + V+ +A+ + + N+ + ++
Sbjct: 85 MQELRVAVDEDVFV--ALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRF 142
Query: 161 CISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEML-LEGVEMNPYSFSI 219
+D A VF M +N SW L+ GYA G + ++ ML + GV+ + Y+F
Sbjct: 143 GNLVD-AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 220 AVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKD 279
+R C ++ GK +H V+++G+ ++ V+N+++ MY + + A FD M +D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 280 LITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHA 338
+I+WN +I+GY ++G E L +F M+ P+ T TS+I+AC L G+ +HA
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 339 GIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKE 398
++ G ++++ N+L MY G+ +++K+FS M +D+V+WT+M+ GY + +
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 399 AIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFK 439
AI+ + M + V+PD I AVL+AC+ G +D G++ K
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 179/343 (52%), Gaps = 7/343 (2%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ +L + Y + G EA LF M +D+VSWT MI+GY ++A + M ++
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMDN 166
V P+ T+++VL AC + L +H +AIK L + V N+L+++Y+ C CI D
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI--DK 451
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A +F+++ KN +SWT++I G + + L ++M + ++ N + + A+ ACA
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACAR 510
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
G + GK IHA V++ G G + + N++LDMY R ++ A F+ +KD+ +WN +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNIL 569
Query: 287 IAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
+ GY + G S + +F +M R P+ TF S++ C+ + G + + G+
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGV 629
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMS-DRDLVTWTSMM 387
NL ++D+ + G + ++ K +M D W +++
Sbjct: 630 TPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 151/312 (48%), Gaps = 7/312 (2%)
Query: 217 FSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT 276
F VR C G +++ + + + N+ L M+ RF L DA F +M+
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 277 EKDLITWNTIIAGYEKSGS-SECLNMFSKMK-SERFSPNCFTFTSIIAACATLAALSCGQ 334
E++L +WN ++ GY K G E + ++ +M P+ +TF ++ C + L+ G+
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 335 QVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHG 394
+VH +VR G + ++ + NALI MY KCG++ ++ +F M RD+++W +M+ GY +G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 395 HGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYG 454
E +ELF M V PD + +V++AC G G + + +
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 455 CVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLD---L 511
+ + AG +EA +L M + D W ++ + + LP+ + R++D +
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPD-KAIDTYRMMDQDSV 394
Query: 512 KPNMMGTYIILS 523
KP+ + +LS
Sbjct: 395 KPDEITVAAVLS 406
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 121/242 (50%), Gaps = 4/242 (1%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
I+A NLI Y I++A +F +P ++V+SWT +IAG N +A +F+ ++
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA-LIFLRQMKM 492
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+ PNA TL++ L AC + +L +H ++ G+ ++ N+L+D+Y C M+
Sbjct: 493 TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG-RMNT 551
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A FN K K+ SW L+TGY+ G G + +F M+ V + +F + C+
Sbjct: 552 AWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEM-TEKDLITWNT 285
+ V G + + + +G NL ++D+ R L +A+++ +M D W
Sbjct: 611 SQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 286 II 287
++
Sbjct: 671 LL 672
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 12/234 (5%)
Query: 297 ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALI 356
E + + + M+ R + + F +++ C A G +V++ + + L NA +
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 357 DMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMV-KSGVRPDR 415
M+ + GN+ D+ +F +MS+R+L +W ++ GY G+ EA+ L+ M+ GV+PD
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 416 IVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKS 475
F VL C + G + + Y + ++ ++ + + G VK A L
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 476 MPFKPDESVWGPLL------GACKEHRLPNLGKLAALRVLDLKPNMMGTYIILS 523
MP + D W ++ G C E L A+R L + P++M ++S
Sbjct: 257 MP-RRDIISWNAMISGYFENGMCHE----GLELFFAMRGLSVDPDLMTLTSVIS 305
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 306/541 (56%), Gaps = 3/541 (0%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ ++L+ Y G I+++ +F EMP R+ V+WT +I G + + T F EM R+E
Sbjct: 145 VGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE 204
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
+ +T + LKAC G++ + +H I G ++ V NSL +Y T C M +
Sbjct: 205 ELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY-TECGEMQDG 263
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
+F +M ++ VSWT+LI Y G + F +M V N +F+ ACAS
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ +G+ +H V+ G +L V NS++ MY L A+ F M +D+I+W+TII
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 288 AGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLD 346
GY ++G E FS M+ P F S+++ +A + G+QVHA + GL+
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE 443
Query: 347 GNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM 406
N + ++LI+MY+KCG+I ++ IF E D+V+ T+M+ GY HG KEAI+LF++
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKS 503
Query: 407 VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGR 465
+K G RPD + F++VLTAC+H+G +D G YF M + YN+ P KE YGC+VDLL RAGR
Sbjct: 504 LKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGR 563
Query: 466 VKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNI 525
+ +A ++I M +K D+ VW LL ACK G+ AA R+L+L P + L+NI
Sbjct: 564 LSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI 623
Query: 526 YAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEML 585
Y++ G EE A RK M+ G KE G S I+++D V F++ D+ ++ +Y +LE+
Sbjct: 624 YSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELA 683
Query: 586 I 586
+
Sbjct: 684 V 684
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 241/420 (57%), Gaps = 4/420 (0%)
Query: 53 IKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEM--VRNEVNP 110
++S + G + AR +FD+MP D+VSWT +I Y + N ++A +F M V + V+P
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 111 NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLV 170
+ LS VLKAC +++ +H A+K L S+YV +SL+D+Y +D + V
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG-KIDKSCRV 165
Query: 171 FNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWV 230
F++M ++N V+WT +ITG H+G GL F EM + Y+F+IA++ACA V
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 231 SFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGY 290
+GK IH VI GF + L V NS+ MY + D F+ M+E+D+++W ++I Y
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 291 EKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNL 349
++ G + + F KM++ + PN TF S+ +ACA+L+ L G+Q+H ++ GL+ +L
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 350 ALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKS 409
+++N+++ MY+ CGN+ + +F M RD+++W++++ GY G G+E + F M +S
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 410 GVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEA 469
G +P ++L+ + +++ G + + + N + ++++ + G +KEA
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 168/327 (51%), Gaps = 4/327 (1%)
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYS--FSIAVRAC 224
AR VF+ M + VSWT++I Y + N L +F M + ++P + S+ ++AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
+ +++G+ +HA +K S++ V +S+LDMY R + + + F EM ++ +TW
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 285 TIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
II G +G E L FS+M + +TF + ACA L + G+ +H ++ R
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
G L +AN+L MY +CG + D +F MS+RD+V+WTS+++ Y G +A+E F
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
+M S V P+ F ++ +AC+ + G + ++ +N + + ++ +
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLG 490
G + A L + M + D W ++G
Sbjct: 359 GNLVSASVLFQGMRCR-DIISWSTIIG 384
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 265 LSDANQYFDEMTEKDLITWNTIIAGY-EKSGSSECLNMFSKMK--SERFSPNCFTFTSII 321
L A Q FD+M D+++W +II Y + S E L +FS M+ SP+ + ++
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 322 AACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLV 381
AC + ++ G+ +HA V+ L ++ + ++L+DMY + G I S ++FSEM R+ V
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 382 TWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM 441
TWT+++ G G KE + F EM +S D F L AC AGL +KY K++
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC--AGL--RQVKYGKAI 231
Query: 442 NDYNVNPNKEIYGCVVDLLG----RAGRVKEAYELIKSMPFKPDESVWGPLLGACKE--H 495
+ + + CV + L G +++ L ++M + D W L+ A K
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQ 290
Query: 496 RLPNLGKLAALRVLDLKPN 514
+ + +R + PN
Sbjct: 291 EVKAVETFIKMRNSQVPPN 309
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 363 GNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM--VKSGVRPDRIVFMA 420
GN+ ++++F +M D+V+WTS++ Y + EA+ LF M V V PD V
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 421 VLTACSHAGLVDEGLKYFKSMNDYNVNPN--KEIY--GCVVDLLGRAGRVKEAYELIKSM 476
VL AC + + Y +S++ Y V + +Y ++D+ R G++ ++ + M
Sbjct: 114 VLKACGQS----SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 477 PFK 479
PF+
Sbjct: 170 PFR 172
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
S + ++LI Y G I+EA +F E D+VS T MI GY +A +F + ++
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISM 164
P++ T SVL AC L M ++E E+ V C +
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNM-MQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 165 DNARLVFNDMKW-KNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNP 214
+A + N+M W K+DV WTTL+ G+ G + +L E++P
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL----ELDP 611
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 192/549 (34%), Positives = 317/549 (57%), Gaps = 9/549 (1%)
Query: 65 ARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKG 124
ART+FD M ERD++SW +IAG +A +F++++R + P+ +T++SVLKA
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 125 M-KSLSNAALVHGMAIKEGLEGSIYVENSLMDVYAT--CCISMDNARLVFNDMKWKNDVS 181
+ + LS + VH AIK +V +L+D Y+ C M A ++F + + V+
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC---MKEAEILFERHNF-DLVA 484
Query: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241
W ++ GY S +G+ L +F M +G + ++ + + C ++ GK +HA I
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSE-CLN 300
K G+ +L V + ILDMY + +S A FD + D + W T+I+G ++G E +
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 301 MFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYA 360
+FS+M+ P+ FT ++ A + L AL G+Q+HA ++ + + +L+DMYA
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 361 KCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMA 420
KCG+I D+ +F + ++ W +M++G HG GKE ++LF +M G++PD++ F+
Sbjct: 665 KCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIG 724
Query: 421 VLTACSHAGLVDEGLKYFKSMN-DYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
VL+ACSH+GLV E K+ +SM+ DY + P E Y C+ D LGRAG VK+A LI+SM +
Sbjct: 725 VLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSME 784
Query: 480 PDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFR 539
S++ LL AC+ GK A ++L+L+P Y++LSN+YAA KW+E R
Sbjct: 785 ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLAR 844
Query: 540 KIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDID 599
+M+G KK+ G SWIEV++K+ F+ +D+ T+ +Y ++ +IR + + Y P+ D
Sbjct: 845 TMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETD 904
Query: 600 CLIHDLEGE 608
+ D+E E
Sbjct: 905 FTLVDVEEE 913
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 228/457 (49%), Gaps = 9/457 (1%)
Query: 100 FVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYAT 159
F +MV ++V + T +L + SL+ VH MA+K GL+ + V NSL+++Y
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 160 CCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSI 219
AR VF++M ++ +SW ++I G A +G + +F ++L G++ + Y+ +
Sbjct: 363 -LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTS 421
Query: 220 AVRACAS-TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEK 278
++A +S +S K +H IK S+ V +++D Y R C+ +A F E
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNF 480
Query: 279 DLITWNTIIAGYEKS-GSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVH 337
DL+ WN ++AGY +S + L +F+ M + + FT ++ C L A++ G+QVH
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGK 397
A ++ G D +L +++ ++DMY KCG++S +Q F + D V WT+M+ G +G +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 398 EAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVV 457
A +F +M GV PD + A S +++G + + N + + +V
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 458 DLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEH--RLPNLGKLAALRVLDLKPNM 515
D+ + G + +AY L K + + + W +L +H L ++ L +KP+
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDK 719
Query: 516 MGTYIILSNIYAAEGKWEEFAKFRKIMRG-MGSKKEV 551
+ T+I + + + G E K + M G G K E+
Sbjct: 720 V-TFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 208/458 (45%), Gaps = 45/458 (9%)
Query: 44 GPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEM 103
G +A L+ Y G ++E + LF+EMP RDVV W +M+ Y +A +
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 104 VRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCIS 163
+ +NPN TL +L G S +A V A G + S E
Sbjct: 238 HSSGLNPNEITLR-LLARISGDDS--DAGQVKSFA--NGNDASSVSE------------- 279
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRA 223
++F + ++ Y HSG L F +M+ VE + +F + +
Sbjct: 280 -----IIFRNKG----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
++ G+ +H +K G L V NS+++MYC+ A FD M+E+DLI+W
Sbjct: 325 AVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 284 NTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLA-ALSCGQQVHAGIV 341
N++IAG ++G E + +F ++ P+ +T TS++ A ++L LS +QVH +
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIE 401
+ + ++ ALID Y++ + +++ +F E + DLV W +MM GY G + ++
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 402 LFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKE----IYGCVV 457
LF M K G R D V C +++G K ++ Y + + + ++
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQG----KQVHAYAIKSGYDLDLWVSSGIL 559
Query: 458 DLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
D+ + G + A S+P PD+ W ++ C E+
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIEN 596
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 211/471 (44%), Gaps = 49/471 (10%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYT-SFNCH----NQAWTVFV 101
L NLI Y G + AR +FD+MP+RD+VSW ++A Y S C QA+ +F
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 102 EMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
+ ++ V + TLS +LK C + + HG A K GL+G +V +L+++Y
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
+ +++F +M +++ V W ++ Y G + + G+ N + +
Sbjct: 195 -KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
R G A +K N D + ++I
Sbjct: 254 RIS--------GDDSDAGQVKSFANGN------------------------DASSVSEII 281
Query: 282 TWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGI 340
N ++ Y SG S L F+ M + TF ++A + +L+ GQQVH
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 341 VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAI 400
++ GLD L ++N+LI+MY K ++ +F MS+RDL++W S++ G +G EA+
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 401 ELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKE----IYGCV 456
LF ++++ G++PD+ +VL A S + EGL K ++ + + N + +
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 457 VDLLGRAGRVKEAYELIKSMPFKPDESVWGPLL-GACKEHRLPNLGKLAAL 506
+D R +KEA L + F D W ++ G + H KL AL
Sbjct: 459 IDAYSRNRCMKEAEILFERHNF--DLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 221 VRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDL 280
+R ++ + GK HA ++ ++N+++ MY + L+ A + FD+M ++DL
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 281 ITWNTIIAGYEKSGSSECLN--------MFSKMKSERFSPNCFTFTSIIAACATLAALSC 332
++WN+I+A Y +S SEC+ +F ++ + + T + ++ C +
Sbjct: 106 VSWNSILAAYAQS--SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 333 GQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGA 392
+ H + GLDG+ +A AL+++Y K G + + + +F EM RD+V W M+ Y
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 393 HGHGKEAIELFDEMVKSGVRPDRIVF 418
G +EAI+L SG+ P+ I
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 326 TLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTS 385
T + L G+ HA I+ + L N LI MY+KCG+++ ++++F +M DRDLV+W S
Sbjct: 51 TSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNS 110
Query: 386 MMIGYGAHGHG-----KEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKS 440
++ Y ++A LF + + V R+ +L C H+G V +
Sbjct: 111 ILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 441 MNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
++ ++ + G +V++ + G+VKE L + MP++ D +W +L A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 290/497 (58%), Gaps = 7/497 (1%)
Query: 117 SVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMDNARLVFNDMK 175
++L AC ++L + VH IK + Y+ L+ Y C C +++AR V ++M
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDEMP 114
Query: 176 WKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKL 235
KN VSWT +I+ Y+ +G+ L VF EM+ + N ++F+ + +C + GK
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 236 IHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG- 294
IH ++K + S++ V +S+LDMY + + +A + F+ + E+D+++ IIAGY + G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 295 SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANA 354
E L MF ++ SE SPN T+ S++ A + LA L G+Q H ++RR L L N+
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 355 LIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMV-KSGVRP 413
LIDMY+KCGN+S ++++F M +R ++W +M++GY HG G+E +ELF M + V+P
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 414 DRIVFMAVLTACSHAGLVDEGLKYFKSM--NDYNVNPNKEIYGCVVDLLGRAGRVKEAYE 471
D + +AVL+ CSH + D GL F M +Y P E YGC+VD+LGRAGR+ EA+E
Sbjct: 355 DAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFE 414
Query: 472 LIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGK 531
IK MP KP V G LLGAC+ H ++G+ R+++++P G Y+ILSN+YA+ G+
Sbjct: 415 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGR 474
Query: 532 WEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNE 591
W + R +M KE G SWI+ + F AND+ + V ++ + M +
Sbjct: 475 WADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Query: 592 TAYEPDIDCLIHDLEGE 608
Y PD+ C+++D++ E
Sbjct: 535 AGYVPDLSCVLYDVDEE 551
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 171/337 (50%), Gaps = 5/337 (1%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
+ L T L+ Y +E+AR + DEMPE++VVSWT MI+ Y+ ++A TVF EM+R
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
++ PN FT ++VL +C L +HG+ +K + I+V +SL+D+YA +
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG-QIK 205
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
AR +F + ++ VS T +I GYA G L +F + EG+ N +++ + A +
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
+ GK H V++ + NS++DMY + LS A + FD M E+ I+WN
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNA 325
Query: 286 IIAGYEKSG-SSECLNMFSKMKSE-RFSPNCFTFTSIIAACATLAALSCGQQVHAGIV-- 341
++ GY K G E L +F M+ E R P+ T ++++ C+ G + G+V
Sbjct: 326 MLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAG 385
Query: 342 RRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR 378
G ++DM + G I ++ + M +
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 183/346 (52%), Gaps = 17/346 (4%)
Query: 200 GVFKEMLLE----GVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSI 255
G +E LLE G EM + + + AC + G+ +HA +IK + + +
Sbjct: 34 GRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRL 93
Query: 256 LDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNC 314
L Y + DCL DA + DEM EK++++W +I+ Y ++G SSE L +F++M PN
Sbjct: 94 LIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNE 153
Query: 315 FTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSE 374
FTF +++ +C + L G+Q+H IV+ D ++ + ++L+DMYAK G I ++++IF
Sbjct: 154 FTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFEC 213
Query: 375 MSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEG 434
+ +RD+V+ T+++ GY G +EA+E+F + G+ P+ + + ++LTA S L+D G
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG 273
Query: 435 LKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKE 494
+ + + + ++D+ + G + A L +MP + S W +L +
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS-WNAMLVGYSK 332
Query: 495 HRLPNLGK--LAALRVL----DLKPNMMGTYIILSNIYAAEGKWEE 534
H LG+ L R++ +KP+ + +LS + G+ E+
Sbjct: 333 H---GLGREVLELFRLMRDEKRVKPDAVTLLAVLSG--CSHGRMED 373
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/548 (35%), Positives = 318/548 (58%), Gaps = 8/548 (1%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
++A++L+ Y L E + +FDEMPERDV SW +I+ + +A +F M +
Sbjct: 143 VVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESS 202
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMD 165
PN+ +L+ + AC + L +H +K+G E YV ++L+D+Y C C+ +
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV- 261
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
AR VF M K+ V+W ++I GY G+ + + M++EG + + + + AC+
Sbjct: 262 -AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI-TWN 284
+ + GK IH VI+ +++ V S++D+Y + + A F + T+KD+ +WN
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWN 379
Query: 285 TIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
+I+ Y G+ + + ++ +M S P+ TFTS++ AC+ LAAL G+Q+H I
Sbjct: 380 VMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
L+ + L +AL+DMY+KCGN ++ +IF+ + +D+V+WT M+ YG+HG +EA+ F
Sbjct: 440 RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQF 499
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGR 462
DEM K G++PD + +AVL+AC HAGL+DEGLK+F M + Y + P E Y C++D+LGR
Sbjct: 500 DEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGR 559
Query: 463 AGRVKEAYELIKSMPFKPDES-VWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYII 521
AGR+ EAYE+I+ P D + + L AC H +LG A +++ P+ TY++
Sbjct: 560 AGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMV 619
Query: 522 LSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGV 581
L N+YA+ W+ + R M+ MG +K+ G SWIE+ DKVC F A D+ + VY
Sbjct: 620 LFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYEC 679
Query: 582 LEMLIRHM 589
L +L HM
Sbjct: 680 LALLSGHM 687
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 264/503 (52%), Gaps = 8/503 (1%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPER-DVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
+L +LI YF AR +F+ R DV W +++GY+ + + VF ++
Sbjct: 40 VLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLN 99
Query: 106 NEVN-PNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISM 164
+ P++FT +V+KA + ++H + +K G + V +SL+ +YA +
Sbjct: 100 CSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL-F 158
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
+N+ VF++M ++ SW T+I+ + SG L +F M G E N S ++A+ AC
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
+ W+ GK IH +K GF + V ++++DMY + DCL A + F +M K L+ WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 285 TIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
++I GY G S+ C+ + ++M E P+ T TSI+ AC+ L G+ +H ++R
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
++ ++ + +LID+Y KCG + ++ +FS+ +W M+ Y + G+ +A+E++
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
D+MV GV+PD + F +VL ACS +++G + S+++ + ++ + ++D+ +
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPN--LGKLAALRVLDLKPNMMGTYII 521
G KEA+ + S+P K D W ++ A H P L + ++ LKP+ + +
Sbjct: 459 GNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 522 LSNIYAAEGKWEEFAKFRKIMRG 544
LS A G +E KF MR
Sbjct: 518 LSACGHA-GLIDEGLKFFSQMRS 539
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 213/388 (54%), Gaps = 20/388 (5%)
Query: 115 LSSVLKAC-KGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC---CISMDNARLV 170
L S+L+ C KSL LVH + GL + + SL++VY TC C +AR V
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHC----SARHV 61
Query: 171 FNDMKWKNDVS-WTTLITGYAHSGNGYGGLGVFKEMLLEGVEM-NPYSFSIAVRACASTG 228
F + ++DV W +L++GY+ + + L VFK +L + + + ++F ++A + G
Sbjct: 62 FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG 121
Query: 229 WVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIA 288
G++IH V+K G+ ++ V +S++ MY +F+ ++ Q FDEM E+D+ +WNT+I+
Sbjct: 122 REFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 289 GYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDG 347
+ +SG +E L +F +M+S F PN + T I+AC+ L L G+++H V++G +
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 348 NLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMV 407
+ + +AL+DMY KC + ++++F +M + LV W SM+ GY A G K +E+ + M+
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 408 KSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNP--NKEIY-GC-VVDLLGRA 463
G RP + ++L ACS + L + K ++ Y + N +IY C ++DL +
Sbjct: 302 IEGTRPSQTTLTSILMACSRS----RNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGA 491
G A E + S K W ++ +
Sbjct: 358 GEANLA-ETVFSKTQKDVAESWNVMISS 384
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 315/552 (57%), Gaps = 8/552 (1%)
Query: 65 ARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKG 124
A +FD MPER+VVSW+ +++G+ + ++F EM R + PN FT S+ LKAC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 125 MKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTT 184
+ +L +HG +K G E + V NSL+D+Y+ C ++ A VF + ++ +SW
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG-RINEAEKVFRRIVDRSLISWNA 178
Query: 185 LITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIA--VRACASTGWVSFGKLIHAAVIK 242
+I G+ H+G G L F M ++ P F++ ++AC+STG + GK IH +++
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 243 HGFG--SNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECL 299
GF S+ + S++D+Y + L A + FD++ EK +I+W+++I GY + G E +
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 300 NMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMY 359
+F +++ + F +SII A A L G+Q+ A V+ ++ N+++DMY
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMY 358
Query: 360 AKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFM 419
KCG + +++K F+EM +D+++WT ++ GYG HG GK+++ +F EM++ + PD + ++
Sbjct: 359 LKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 420 AVLTACSHAGLVDEGLKYF-KSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPF 478
AVL+ACSH+G++ EG + F K + + + P E Y CVVDLLGRAGR+KEA LI +MP
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPI 478
Query: 479 KPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKF 538
KP+ +W LL C+ H LGK +L + Y+++SN+Y G W E
Sbjct: 479 KPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNA 538
Query: 539 RKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNET-AYEPD 597
R++ G KKE GMSW+E+ +V F + + T + L+ R + E Y
Sbjct: 539 RELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYG 598
Query: 598 IDCLIHDLEGET 609
+ +HD++ E+
Sbjct: 599 LKHELHDIDDES 610
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 196/389 (50%), Gaps = 7/389 (1%)
Query: 114 TLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFND 173
L S+L+ C VH +K G ++ N L+D+Y C + A VF+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL-MAYKVFDS 66
Query: 174 MKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFG 233
M +N VSW+ L++G+ +G+ G L +F EM +G+ N ++FS ++AC + G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
IH +K GF + V NS++DMY + +++A + F + ++ LI+WN +IAG+ +
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 294 G-SSECLNMFSKMKSERFS--PNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLD--GN 348
G S+ L+ F M+ P+ FT TS++ AC++ + G+Q+H +VR G +
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 349 LALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVK 408
+ +L+D+Y KCG + ++K F ++ ++ +++W+S+++GY G EA+ LF + +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 409 SGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKE 468
+ D +++ + L+ +G + + VVD+ + G V E
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 469 AYELIKSMPFKPDESVWGPLLGACKEHRL 497
A + M K D W ++ +H L
Sbjct: 367 AEKCFAEMQLK-DVISWTVVITGYGKHGL 394
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 185/374 (49%), Gaps = 12/374 (3%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ +L+ Y G I EA +F + +R ++SW MIAG+ ++A F M
Sbjct: 144 VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEAN 203
Query: 108 V--NPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLE--GSIYVENSLMDVYATCCIS 163
+ P+ FTL+S+LKAC + +HG ++ G S + SL+D+Y C
Sbjct: 204 IKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY- 262
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRA 223
+ +AR F+ +K K +SW++LI GYA G +G+FK + +++ ++ S +
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
A + GK + A +K G V+NS++DMY + + +A + F EM KD+I+W
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISW 382
Query: 284 NTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
+I GY K G + + +F +M P+ + ++++AC+ + G+++ + ++
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE 442
Query: 343 -RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR-DLVTWTSMMIGYGAHGHGKEAI 400
G+ + ++D+ + G + +++ + M + ++ W +++ HG I
Sbjct: 443 THGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD----I 498
Query: 401 ELFDEMVKSGVRPD 414
EL E+ K +R D
Sbjct: 499 ELGKEVGKILLRID 512
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 15/109 (13%)
Query: 40 LIPKGPSILATNLIKS----YFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQ 95
L K PS L T+++ S Y GL++EA F EM +DV+SWTV+I GY +
Sbjct: 338 LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 397
Query: 96 AWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLE 144
+ +F EM+R+ + P+ +VL AC H IKEG E
Sbjct: 398 SVRIFYEMLRHNIEPDEVCYLAVLSACS-----------HSGMIKEGEE 435
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 295/493 (59%), Gaps = 8/493 (1%)
Query: 124 GMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCIS---MDNARLVFNDM-KWKND 179
G+ S++ +H +I+ G+ S + Y S M A VF+ + K N
Sbjct: 26 GVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINV 85
Query: 180 VSWTTLITGYAHSGNGYGGLGVFKEMLLEG-VEMNPYSFSIAVRACASTGWVSFGKLIHA 238
W TLI GYA GN +++EM + G VE + +++ ++A + V G+ IH+
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 239 AVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SE 297
VI+ GFGS + V NS+L +Y ++ A + FD+M EKDL+ WN++I G+ ++G E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 298 CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALID 357
L ++++M S+ P+ FT S+++ACA + AL+ G++VH +++ GL NL +N L+D
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 358 MYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKS-GVRPDRI 416
+YA+CG + +++ +F EM D++ V+WTS+++G +G GKEAIELF M + G+ P I
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 417 VFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGRVKEAYELIKS 475
F+ +L ACSH G+V EG +YF+ M + Y + P E +GC+VDLL RAG+VK+AYE IKS
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 476 MPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEF 535
MP +P+ +W LLGAC H +L + A +++L L+PN G Y++LSN+YA+E +W +
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 536 AKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYE 595
K RK M G KK G S +EV ++V F+ DK + +Y L+ + + Y
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 596 PDIDCLIHDLEGE 608
P I + D+E E
Sbjct: 506 PQISNVYVDVEEE 518
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 163/335 (48%), Gaps = 28/335 (8%)
Query: 76 DVVSWTVMIAGYTSFNCHNQAWTVFVEM-VRNEVNPNAFTLSSVLKACKGMKSLSNAALV 134
+V W +I GY A++++ EM V V P+ T ++KA M + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 135 HGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGN 194
H + I+ G IYV+NSL+ +YA C + +A VF+ M K+ V+W ++I G+A +G
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCG-DVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 195 GYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNS 254
L ++ EM +G++ + ++ + ACA G ++ GK +H +IK G NL N
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 255 ILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKS-ERFSP 312
+LD+Y R + +A FDEM +K+ ++W ++I G +G E + +F M+S E P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 313 NCFTFTSIIAACATLAALSCGQQVHAGIVRRG------------LDGNLALANALIDMYA 360
TF I+ AC+ H G+V+ G ++ + ++D+ A
Sbjct: 323 CEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 361 KCGNISDSQKIFSEMS-DRDLVTWTSMMIGYGAHG 394
+ G + + + M ++V W +++ HG
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 138/269 (51%), Gaps = 5/269 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ +L+ Y + G + A +FD+MPE+D+V+W +I G+ +A ++ EM
Sbjct: 158 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 217
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
+ P+ FT+ S+L AC + +L+ VH IK GL +++ N L+D+YA C ++ A
Sbjct: 218 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG-RVEEA 276
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEM-LLEGVEMNPYSFSIAVRACAS 226
+ +F++M KN VSWT+LI G A +G G + +FK M EG+ +F + AC+
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 227 TGWVSFG-KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT-EKDLITWN 284
G V G + ++ + ++D+ R + A +Y M + +++ W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 285 TIIAGYEKSGSSECLNMFSKMKSERFSPN 313
T++ G S+ L F++++ + PN
Sbjct: 397 TLLGACTVHGDSD-LAEFARIQILQLEPN 424
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 285/488 (58%), Gaps = 2/488 (0%)
Query: 116 SSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMK 175
+++LK C K L +VH ++ I + N+L+++YA C S++ AR VF M
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG-SLEEARKVFEKMP 122
Query: 176 WKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKL 235
++ V+WTTLI+GY+ L F +ML G N ++ S ++A A+ G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 236 IHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGY-EKSG 294
+H +K GF SN+ V +++LD+Y R+ + DA FD + ++ ++WN +IAG+ +SG
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 295 SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANA 354
+ + L +F M + F P+ F++ S+ AC++ L G+ VHA +++ G N
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 355 LIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPD 414
L+DMYAK G+I D++KIF ++ RD+V+W S++ Y HG GKEA+ F+EM + G+RP+
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 415 RIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIK 474
I F++VLTACSH+GL+DEG Y++ M + P Y VVDLLGRAG + A I+
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIE 422
Query: 475 SMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEE 534
MP +P ++W LL AC+ H+ LG AA V +L P+ G ++IL NIYA+ G+W +
Sbjct: 423 EMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWND 482
Query: 535 FAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAY 594
A+ RK M+ G KKE SW+E+ + + F+AND+ + + E ++ + E Y
Sbjct: 483 AARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Query: 595 EPDIDCLI 602
PD +I
Sbjct: 543 VPDTSHVI 550
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 186/330 (56%), Gaps = 2/330 (0%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
++ L+ Y G +EEAR +F++MP+RD V+WT +I+GY+ + A F +M+R
Sbjct: 96 VMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF 155
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+PN FTLSSV+KA + +HG +K G + +++V ++L+D+Y + MD+
Sbjct: 156 GYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGL-MDD 214
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A+LVF+ ++ +NDVSW LI G+A L +F+ ML +G + +S++ AC+S
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
TG++ GK +HA +IK G N++LDMY + + DA + FD + ++D+++WN++
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 287 IAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
+ Y + G E + F +M+ PN +F S++ AC+ L G + + + G+
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGI 394
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEM 375
++D+ + G+++ + + EM
Sbjct: 395 VPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 171/317 (53%), Gaps = 18/317 (5%)
Query: 217 FSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT 276
++ ++ C + G+++HA +++ F ++ + N++L+MY + L +A + F++M
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 277 EKDLITWNTIIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQ 335
++D +TW T+I+GY + + L F++M +SPN FT +S+I A A CG Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 336 VHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGH 395
+H V+ G D N+ + +AL+D+Y + G + D+Q +F + R+ V+W +++ G+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 396 GKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYG- 454
++A+ELF M++ G RP + ++ ACS G +++G K ++ Y + +++
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG----KWVHAYMIKSGEKLVAF 298
Query: 455 ---CVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAA-----L 506
++D+ ++G + +A ++ + K D W LL A +H GK A +
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH---GFGKEAVWWFEEM 354
Query: 507 RVLDLKPNMMGTYIILS 523
R + ++PN + +L+
Sbjct: 355 RRVGIRPNEISFLSVLT 371
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 186/551 (33%), Positives = 322/551 (58%), Gaps = 25/551 (4%)
Query: 62 IEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKA 121
+++A+ LFD + S+ MI GY+ +A +F ++ + + + +LS V +A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 122 CKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVS 181
C +K LS ++G+AIK L + V N+ +D+Y C ++ A VF++M+ ++ VS
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKC-QALAEAFRVFDEMRRRDAVS 450
Query: 182 WTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241
W +I + +G GY L +F ML +E + ++F ++AC + G + +G IH++++
Sbjct: 451 WNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIV 509
Query: 242 KHGFGSNLPVMNSILDMYCRFDCLSDA----NQYF------------DEMTEKDL----I 281
K G SN V S++DMY + + +A +++F ++M K L +
Sbjct: 510 KSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCV 569
Query: 282 TWNTIIAGY-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGI 340
+WN+II+GY K S + +F++M +P+ FT+ +++ CA LA+ G+Q+HA +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 341 VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAI 400
+++ L ++ + + L+DMY+KCG++ DS+ +F + RD VTW +M+ GY HG G+EAI
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 401 ELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDL 459
+LF+ M+ ++P+ + F+++L AC+H GL+D+GL+YF M DY ++P Y +VD+
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 749
Query: 460 LGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLP-NLGKLAALRVLDLKPNMMGT 518
LG++G+VK A ELI+ MPF+ D+ +W LLG C HR + + A +L L P
Sbjct: 750 LGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA 809
Query: 519 YIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYV 578
Y +LSN+YA G WE+ + R+ MRG KKE G SW+E++D++ F+ DK + +
Sbjct: 810 YTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEI 869
Query: 579 YGVLEMLIRHM 589
Y L ++ M
Sbjct: 870 YEELGLIYSEM 880
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 234/470 (49%), Gaps = 24/470 (5%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
+ A+ L+ Y E+ +F +PE++ VSW+ +IAG N + A F EM +
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+ +SVL++C + L +H A+K V + +D+YA C +M +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK-CDNMQD 334
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A+++F++ + N S+ +ITGY+ +G+ L +F ++ G+ + S S RACA
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
+S G I+ IK ++ V N+ +DMY + L++A + FDEM +D ++WN I
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 287 IAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
IA +E++G E L +F M R P+ FTF SI+ AC T +L G ++H+ IV+ G+
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGM 513
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFS----------------EMSDRDL----VTWTS 385
N ++ +LIDMY+KCG I +++KI S +M ++ L V+W S
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNS 573
Query: 386 MMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYN 445
++ GY ++A LF M++ G+ PD+ + VL C++ G + +
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633
Query: 446 VNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
+ + I +VD+ + G + ++ L+ + D W ++ H
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHH 682
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 223/429 (51%), Gaps = 4/429 (0%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
+I Y + +A + F+ MP RDVVSW M++GY ++ VFV+M R + +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVF 171
T + +LK C ++ S +HG+ ++ G + + ++L+D+YA +++ R VF
Sbjct: 180 GRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR-VF 238
Query: 172 NDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS 231
+ KN VSW+ +I G + L FKEM ++ ++ +R+CA+ +
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 232 FGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGY- 290
G +HA +K F ++ V + LDMY + D + DA FD + ++N +I GY
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 291 EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLA 350
++ + L +F ++ S + + + + ACA + LS G Q++ ++ L ++
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 351 LANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSG 410
+ANA IDMY KC ++++ ++F EM RD V+W +++ + +G G E + LF M++S
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 411 VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAY 470
+ PD F ++L AC+ G + G++ S+ + N + ++D+ + G ++EA
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA- 536
Query: 471 ELIKSMPFK 479
E I S F+
Sbjct: 537 EKIHSRFFQ 545
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 247/560 (44%), Gaps = 44/560 (7%)
Query: 75 RDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFT-LSSVLKACKGMKSLSNAAL 133
R VVS+ + S+ +++ F + + N+VN + T S V K C +L
Sbjct: 12 RSVVSFNRCLTEKISYR-RVPSFSYFTDFL-NQVNSVSTTNFSFVFKECAKQGALELGKQ 69
Query: 134 VHGMAIKEGLEGSIYVENSLMDVYATC------------------------------CIS 163
H I G + +V N L+ VY
Sbjct: 70 AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRA 223
M A FN M ++ VSW ++++GY +G + VF +M EG+E + +F+I ++
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
C+ S G IH V++ G +++ +++LDMY + ++ + F + EK+ ++W
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 284 NTIIAG-YEKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
+ IIAG + + S L F +M+ + + S++ +CA L+ L G Q+HA ++
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
+ + A +DMYAKC N+ D+Q +F + + ++ +M+ GY HG +A+ L
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 403 FDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGR 462
F ++ SG+ D I V AC+ + EGL+ + +++ + + +D+ G+
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEH--RLPNLGKLAALRVLDLKPNMMGTYI 520
+ EA+ + M + D W ++ A +++ L ++ ++P+
Sbjct: 430 CQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 521 ILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQY--- 577
IL + + GM S VG S I++ K CG I + H+++
Sbjct: 489 ILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK-CGMI-EEAEKIHSRFFQR 546
Query: 578 --VYGVLEMLIRHMNETAYE 595
V G +E L + N+ E
Sbjct: 547 ANVSGTMEELEKMHNKRLQE 566
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 23/264 (8%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERD--------------------VVSWTVMIA 85
S + +LI Y G+IEEA + +R VSW +I+
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 576
Query: 86 GYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEG 145
GY A +F M+ + P+ FT ++VL C + S +H IK+ L+
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 146 SIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEM 205
+Y+ ++L+D+Y+ C + ++RL+F ++ V+W +I GYAH G G + +F+ M
Sbjct: 637 DVYICSTLVDMYSKCG-DLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERM 695
Query: 206 LLEGVEMNPYSFSIAVRACASTGWVSFG-KLIHAAVIKHGFGSNLPVMNSILDMYCRFDC 264
+LE ++ N +F +RACA G + G + + +G LP ++++D+ +
Sbjct: 696 ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGK 755
Query: 265 LSDANQYFDEMT-EKDLITWNTII 287
+ A + EM E D + W T++
Sbjct: 756 VKRALELIREMPFEADDVIWRTLL 779
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 356 bits (913), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/577 (35%), Positives = 328/577 (56%), Gaps = 25/577 (4%)
Query: 24 QSLQSVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVM 83
Q +V K+ ++SD ++ + I Y G AR +FDEM +D++SW +
Sbjct: 195 QLQSTVVKTGLESDL--------VVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSL 246
Query: 84 IAGYTSFNCHN-QAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEG 142
++G + +A +F +M+R V + + +SV+ C L A +HG+ IK G
Sbjct: 247 LSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG 306
Query: 143 LEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVF 202
E + V N LM Y+ C + ++ + VF+ M +N VSWTT+I S N + +F
Sbjct: 307 YESLLEVGNILMSRYSKCGV-LEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIF 360
Query: 203 KEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRF 262
M +GV N +F + A + G IH IK GF S V NS + +Y +F
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 263 DCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSII 321
+ L DA + F+++T +++I+WN +I+G+ ++G S E L MF +E PN +TF S++
Sbjct: 421 EALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVL 479
Query: 322 AACATLAALSC--GQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRD 379
A A +S GQ+ HA +++ GL+ +++AL+DMYAK GNI +S+K+F+EMS ++
Sbjct: 480 NAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKN 539
Query: 380 LVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFK 439
WTS++ Y +HG + + LF +M+K V PD + F++VLTAC+ G+VD+G + F
Sbjct: 540 QFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFN 599
Query: 440 SMND-YNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLP 498
M + YN+ P+ E Y C+VD+LGRAGR+KEA EL+ +P P ES+ +LG+C+ H
Sbjct: 600 MMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNV 659
Query: 499 NLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEV 558
+G A +++KP + G+Y+ + NIYA + +W++ A+ RK MR KE G SWI+V
Sbjct: 660 KMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Query: 559 RD-----KVCGFIANDKMGSHTQYVYGVLEMLIRHMN 590
D + GF + DK + +Y ++E++ MN
Sbjct: 720 GDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMN 756
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 222/443 (50%), Gaps = 13/443 (2%)
Query: 56 YFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTL 115
Y G + A +F+ + + DVVSW +++G F+ + A V M V +AFT
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSG---FDDNQIALNFVVRMKSAGVVFDAFTY 177
Query: 116 SSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMK 175
S+ L C G + + +K GLE + V NS + +Y+ S AR VF++M
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG-SFRGARRVFDEMS 236
Query: 176 WKNDVSWTTLITGYAHSGN-GYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGK 234
+K+ +SW +L++G + G G+ + +F++M+ EGVE++ SF+ + C + +
Sbjct: 237 FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLAR 296
Query: 235 LIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG 294
IH IK G+ S L V N ++ Y + L F +M+E+++++W T+I+ S
Sbjct: 297 QIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS----SN 352
Query: 295 SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANA 354
+ +++F M+ + PN TF +I A + G ++H ++ G ++ N+
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNS 412
Query: 355 LIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPD 414
I +YAK + D++K F +++ R++++W +M+ G+ +G EA+++F + P+
Sbjct: 413 FITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PN 471
Query: 415 RIVFMAVLTACSHAG--LVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYEL 472
F +VL A + A V +G + + +N + ++D+ + G + E+ ++
Sbjct: 472 EYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Query: 473 IKSMPFKPDESVWGPLLGACKEH 495
M + ++ VW ++ A H
Sbjct: 532 FNEMS-QKNQFVWTSIISAYSSH 553
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 131/234 (55%), Gaps = 8/234 (3%)
Query: 198 GLGVFKEMLLEGV---EMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNS 254
L +FKE L G M+ + +A++AC G + G IH GF S + V N+
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 255 ILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSECLNMFSKMKSERFSPNC 314
++ MY + +A F+ + + D+++WNTI++G++ + + LN +MKS +
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIA--LNFVVRMKSAGVVFDA 174
Query: 315 FTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSE 374
FT+++ ++ C G Q+ + +V+ GL+ +L + N+ I MY++ G+ ++++F E
Sbjct: 175 FTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 375 MSDRDLVTWTSMMIGYGAHG-HGKEAIELFDEMVKSGVRPDRIVFMAVLTACSH 427
MS +D+++W S++ G G G EA+ +F +M++ GV D + F +V+T C H
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 356 bits (913), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 322/568 (56%), Gaps = 5/568 (0%)
Query: 45 PSILATN-LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEM 103
P + +N L+KSY + ++ A LF+E+PE+D V++ +I GY + ++ +F++M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 104 VRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCIS 163
++ P+ FT S VLKA G+ + +H +++ G V N ++D Y+
Sbjct: 242 RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV 301
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRA 223
++ R++F++M + VS+ +I+ Y+ + L F+EM G + + F+ +
Sbjct: 302 LET-RMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSI 360
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
A+ + G+ +H + S L V NS++DMY + + +A F + ++ ++W
Sbjct: 361 AANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSW 420
Query: 284 NTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
+I+GY + G L +F+KM+ + TF +++ A A+ A+L G+Q+HA I+R
Sbjct: 421 TALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR 480
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
G N+ + L+DMYAKCG+I D+ ++F EM DR+ V+W +++ + +G G+ AI
Sbjct: 481 SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGA 540
Query: 403 FDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLG 461
F +M++SG++PD + + VLTACSH G V++G +YF++M+ Y + P K+ Y C++DLLG
Sbjct: 541 FAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLG 600
Query: 462 RAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDL-KPNMMGTYI 520
R GR EA +L+ MPF+PDE +W +L AC+ H+ +L + AA ++ + K Y+
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYV 660
Query: 521 ILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYG 580
+SNIYAA G+WE+ +K MR G KK SW+EV K+ F +ND+ + +
Sbjct: 661 SMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVR 720
Query: 581 VLEMLIRHMNETAYEPDIDCLIHDLEGE 608
+ L + Y+PD ++ D++ +
Sbjct: 721 KINELTAEIEREGYKPDTSSVVQDVDEQ 748
Score = 213 bits (541), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 239/464 (51%), Gaps = 23/464 (4%)
Query: 41 IPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVF 100
+P ++ +I + G + AR LFD MP+R VV+WT+++ Y + ++A+ +F
Sbjct: 74 MPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLF 133
Query: 101 VEMVRNE--VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIY--VENSLMDV 156
+M R+ P+ T +++L C + VH A+K G + + + V N L+
Sbjct: 134 RQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKS 193
Query: 157 YATCCI-SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPY 215
Y C + +D A ++F ++ K+ V++ TLITGY G + +F +M G + + +
Sbjct: 194 Y--CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 216 SFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEM 275
+FS ++A + G+ +HA + GF + V N ILD Y + D + + FDEM
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 276 TEKDLITWNTIIAGYEKSGSSEC-LNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQ 334
E D +++N +I+ Y ++ E L+ F +M+ F F F ++++ A L++L G+
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 335 QVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGY---G 391
Q+H + D L + N+L+DMYAKC +++ IF + R V+WT+++ GY G
Sbjct: 372 QLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKG 431
Query: 392 AHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAG--LVDEGLKYF--KSMNDYNVN 447
HG G ++LF +M S +R D+ F VL A + L+ + L F +S N NV
Sbjct: 432 LHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 448 PNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
+ VD+ + G +K+A ++ + MP + S W L+ A
Sbjct: 489 SGSGL----VDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISA 527
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 44/284 (15%)
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
+ + A +IK GF ++ N I++ R +S A + +DEM K+ ++ NT+I+G+ K+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 294 GS--------------------------------SECLNMFSKM--KSERFSPNCFTFTS 319
G E +F +M S P+ TFT+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 320 IIAACATLAALSCGQQVHAGIVRRGLDGN--LALANALIDMYAKCGNISDSQKIFSEMSD 377
++ C + QVHA V+ G D N L ++N L+ Y + + + +F E+ +
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 378 RDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKY 437
+D VT+ +++ GY G E+I LF +M +SG +P F VL A GL D L
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALG- 269
Query: 438 FKSMNDYNVNP----NKEIYGCVVDLLGRAGRVKEAYELIKSMP 477
+ ++ +V + + ++D + RV E L MP
Sbjct: 270 -QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 354 bits (909), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 319/554 (57%), Gaps = 6/554 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+ +L+ Y G ++A LF M D V+W MI+GY ++ T F EM+ +
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMDN 166
V P+A T SS+L + ++L +H ++ + I++ ++L+D Y C +SM
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSM-- 393
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A+ +F+ + V +T +I+GY H+G L +F+ ++ + N + +
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
+ G+ +H +IK GF + + +++DMY + ++ A + F+ ++++D+++WN++
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 287 IAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
I +S + S +++F +M +C + ++ ++ACA L + S G+ +H +++ L
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSL 573
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
++ + LIDMYAKCGN+ + +F M ++++V+W S++ G HG K+++ LF E
Sbjct: 574 ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHE 633
Query: 406 MV-KSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMN-DYNVNPNKEIYGCVVDLLGRA 463
MV KSG+RPD+I F+ ++++C H G VDEG+++F+SM DY + P +E Y CVVDL GRA
Sbjct: 634 MVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRA 693
Query: 464 GRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILS 523
GR+ EAYE +KSMPF PD VWG LLGAC+ H+ L ++A+ +++DL P+ G Y+++S
Sbjct: 694 GRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS 753
Query: 524 NIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLE 583
N +A +WE K R +M+ +K G SWIE+ + F++ D + ++Y +L
Sbjct: 754 NAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLN 813
Query: 584 MLIRHMNETAYEPD 597
L+ + Y P
Sbjct: 814 SLLGELRLEGYIPQ 827
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 228/449 (50%), Gaps = 3/449 (0%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+A++LIK+Y + G I+ LFD + ++D V W VM+ GY + F M ++
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
++PNA T VL C + +HG+ + G++ ++NSL+ +Y+ C D+A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG-RFDDA 293
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
+F M + V+W +I+GY SG L F EM+ GV + +FS + + +
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ + K IH +++H ++ + ++++D Y + +S A F + D++ + +I
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 288 AGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLD 346
+GY +G + L MF + + SPN T SI+ L AL G+++H I+++G D
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 347 GNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM 406
+ A+IDMYAKCG ++ + +IF +S RD+V+W SM+ + AI++F +M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 407 VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRV 466
SG+ D + A L+AC++ G M +++ + ++D+ + G +
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 467 KEAYELIKSMPFKPDESVWGPLLGACKEH 495
K A + K+M K S W ++ AC H
Sbjct: 594 KAAMNVFKTMKEKNIVS-WNSIIAACGNH 621
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 232/485 (47%), Gaps = 27/485 (5%)
Query: 36 SDPPLIPKGPSILATNLIKS-----YFDE---------GLIEEARTLFDEMPER--DVVS 79
S+P L+ +G + A ++ S Y DE G + +F + R +
Sbjct: 46 SNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRP 105
Query: 80 WTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAI 139
W +I+ + NQA + +M+ V+P+ T ++KAC +K+ +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 140 KEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGL 199
G++ + +V +SL+ Y +D +F+ + K+ V W ++ GYA G +
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYG-KIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 200 GVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMY 259
F M ++ + N +F + CAS + G +H V+ G + NS+L MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 260 CRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFT 318
+ DA++ F M+ D +TWN +I+GY +SG E L F +M S P+ TF+
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 319 SIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR 378
S++ + + L +Q+H I+R + ++ L +ALID Y KC +S +Q IFS+ +
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 379 DLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYF 438
D+V +T+M+ GY +G +++E+F +VK + P+ I +++L + LK
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIG----ILLALKLG 460
Query: 439 KSMNDYNVNP---NKEIYGC-VVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKE 494
+ ++ + + N+ GC V+D+ + GR+ AYE+ + + K D W ++ C +
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQ 519
Query: 495 HRLPN 499
P+
Sbjct: 520 SDNPS 524
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 166/332 (50%), Gaps = 6/332 (1%)
Query: 115 LSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFN-D 173
LS +L+AC L VH I + G Y + ++ +YA C D ++ + D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 174 MKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFG 233
++ + W ++I+ + +G L + +ML GV + +F V+AC +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
+ V G N V +S++ Y + + ++ FD + +KD + WN ++ GY K
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 294 GS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALA 352
G+ + FS M+ ++ SPN TF +++ CA+ + G Q+H +V G+D ++
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 353 NALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVR 412
N+L+ MY+KCG D+ K+F MS D VTW M+ GY G +E++ F EM+ SGV
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 413 PDRIVFMAVLTACSHAGLVDEGLKYFKSMNDY 444
PD I F ++L + S E L+Y K ++ Y
Sbjct: 338 PDAITFSSLLPSVSKF----ENLEYCKQIHCY 365
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 211 EMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQ 270
E P S+ ++AC++ + GK +HA +I + + IL MY SD +
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 271 YFD--EMTEKDLITWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATL 327
F ++ + WN+II+ + ++G ++ L + KM SP+ TF ++ AC L
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 328 AALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMM 387
+ + G+D N +A++LI Y + G I K+F + +D V W M+
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 388 IGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVN 447
GY G I+ F M + P+ + F VL+ C+ L+D G++ + V+
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 448 PNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLL 489
I ++ + + GR +A +L + M + D W ++
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADTVTWNCMI 312
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 303/516 (58%), Gaps = 9/516 (1%)
Query: 101 VEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC 160
+ ++ E +P+ T ++ C SLS+A VH + G + ++ L+ +Y+
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 161 CISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIA 220
S+D AR VF+ + + W L +G+G LG++ +M GVE + ++++
Sbjct: 126 G-SVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYV 184
Query: 221 VRACAST----GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMT 276
++AC ++ + GK IHA + + G+ S++ +M +++DMY RF C+ A+ F M
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 277 EKDLITWNTIIAGYEKSGSS-ECLNMFSKMKSER--FSPNCFTFTSIIAACATLAALSCG 333
+++++W+ +IA Y K+G + E L F +M E SPN T S++ ACA+LAAL G
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 334 QQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAH 393
+ +H I+RRGLD L + +AL+ MY +CG + Q++F M DRD+V+W S++ YG H
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 394 GHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEI 452
G+GK+AI++F+EM+ +G P + F++VL ACSH GLV+EG + F++M D+ + P E
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 453 YGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLK 512
Y C+VDLLGRA R+ EA ++++ M +P VWG LLG+C+ H L + A+ R+ L+
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 513 PNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMG 572
P G Y++L++IYA W+E + +K++ G +K G W+EVR K+ F++ D+
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 573 SHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
+ ++ L L M E Y P ++++LE E
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 580
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 183/359 (50%), Gaps = 12/359 (3%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
LAT LI Y D G ++ AR +FD+ +R + W + T + ++ +M R
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAAL----VHGMAIKEGLEGSIYVENSLMDVYATC-C 161
V + FT + VLKAC + N + +H + G +Y+ +L+D+YA C
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSI-- 219
+ D A VF M +N VSW+ +I YA +G + L F+EM+ E + +P S ++
Sbjct: 233 V--DYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 220 AVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKD 279
++ACAS + GKLIH +++ G S LPV+++++ MY R L + FD M ++D
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 280 LITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHA 338
+++WN++I+ Y G + + +F +M + SP TF S++ AC+ + G+++
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 339 GIVR-RGLDGNLALANALIDMYAKCGNISDSQKIFSEM-SDRDLVTWTSMMIGYGAHGH 395
+ R G+ + ++D+ + + ++ K+ +M ++ W S++ HG+
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 352 bits (903), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 326/568 (57%), Gaps = 12/568 (2%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMV-RN 106
+ ++LI Y G + EA +FDE+ + D+V+W+ M++G+ QA F MV +
Sbjct: 98 VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+V P+ TL +++ AC + + VHG I+ G + + NSL++ YA +
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKS-RAFKE 216
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
A +F + K+ +SW+T+I Y +G L VF +M+ +G E N + ++ACA+
Sbjct: 217 AVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAA 276
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
+ G+ H I+ G + + V +++DMY + +A F + KD+++W +
Sbjct: 277 AHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVAL 336
Query: 287 IAGYEKSG-SSECLNMFSKMKSERFS-PNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
I+G+ +G + + FS M E + P+ ++ +C+ L L + H+ +++ G
Sbjct: 337 ISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYG 396
Query: 345 LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
D N + +L+++Y++CG++ ++ K+F+ ++ +D V WTS++ GYG HG G +A+E F+
Sbjct: 397 FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFN 456
Query: 405 EMVKSG-VRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGR 462
MVKS V+P+ + F+++L+ACSHAGL+ EGL+ FK M NDY + PN E Y +VDLLGR
Sbjct: 457 HMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGR 516
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIIL 522
G + A E+ K MPF P + G LLGAC+ H+ + + A ++ +L+ N G Y+++
Sbjct: 517 VGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLM 576
Query: 523 SNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVL 582
SN+Y +G+WE K R ++ G KK + S IE+R KV F+A+D++ + VYG+L
Sbjct: 577 SNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Query: 583 EMLIRHMNETAYEPDID-CLIHDLEGET 609
+ L HM E D++ C+ + EG++
Sbjct: 637 KELDLHMKE-----DLENCVYFEYEGDS 659
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 233/430 (54%), Gaps = 6/430 (1%)
Query: 64 EARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACK 123
+AR +F EM +R + W ++ + + F M R+E P+ FTL LKAC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 124 GMKSLSNAALVHGMAIKEGLEGS-IYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSW 182
++ ++ ++HG K+ GS +YV +SL+ +Y C ++ R+ F++++ + V+W
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM-FDELEKPDIVTW 130
Query: 183 TTLITGYAHSGNGYGGLGVFKEMLLEG-VEMNPYSFSIAVRACASTGWVSFGKLIHAAVI 241
+++++G+ +G+ Y + F+ M++ V + + V AC G+ +H VI
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 242 KHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLN 300
+ GF ++L ++NS+L+ Y + +A F + EKD+I+W+T+IA Y ++G ++E L
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 301 MFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYA 360
+F+ M + PN T ++ ACA L G++ H +R+GL+ + ++ AL+DMY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 361 KCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM-VKSGVRPDRIVFM 419
KC + ++ +FS + +D+V+W +++ G+ +G +IE F M +++ RPD I+ +
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 420 AVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFK 479
VL +CS G +++ + + Y + N I +V+L R G + A ++ + K
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 480 PDESVWGPLL 489
D VW L+
Sbjct: 431 -DTVVWTSLI 439
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 6/173 (3%)
Query: 259 YCR-FDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFT 316
+CR F DA Q F EMT++ L WNT++ + E L FS M + P+ FT
Sbjct: 3 FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 317 FTSIIAACATLAALSCGQQVHAGIVRRG--LDGNLALANALIDMYAKCGNISDSQKIFSE 374
+ AC L ++ G+ +H G V++ L +L + ++LI MY KCG + ++ ++F E
Sbjct: 63 LPVALKACGELREVNYGEMIH-GFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 375 MSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMV-KSGVRPDRIVFMAVLTACS 426
+ D+VTW+SM+ G+ +G +A+E F MV S V PDR+ + +++AC+
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 351 bits (901), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 310/545 (56%), Gaps = 5/545 (0%)
Query: 43 KGPSILATN-LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFV 101
+ PS+L N +++ Y + +E+A LFDEM E + VS T MI+ Y ++A +F
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 102 EMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
M+ + P + +++LK+ ++L +H I+ GL + +E ++++Y C
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
+ A+ VF+ M K V+ T L+ GY +G L +F +++ EGVE + + FS+ +
Sbjct: 234 W-LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
+ACAS ++ GK IHA V K G S + V ++D Y + A + F E+ E + +
Sbjct: 293 KACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV 352
Query: 282 TWNTIIAGY-EKSGSSECLNMFSKMKSERFSP-NCFTFTSIIAACATLAALSCGQQVHAG 339
+W+ II+GY + S E + F ++S+ S N FT+TSI AC+ LA + G QVHA
Sbjct: 353 SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 340 IVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEA 399
++R L G+ +ALI MY+KCG + D+ ++F M + D+V WT+ + G+ +G+ EA
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 400 IELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVD 458
+ LF++MV G++P+ + F+AVLTACSHAGLV++G +M YNV P + Y C++D
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 459 LLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGT 518
+ R+G + EA + +K+MPF+PD W L C H+ LG++A + L P
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 519 YIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYV 578
Y++ N+Y GKWEE A+ K+M KKE+ SWI+ + K+ FI DK TQ +
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 579 YGVLE 583
Y L+
Sbjct: 653 YEKLK 657
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 240/493 (48%), Gaps = 51/493 (10%)
Query: 94 NQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEG-SIYVENS 152
N+A+ EM + V+ ++++ + +AC+ ++SLS+ L+H ++ G+E S+ ++N
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNC 123
Query: 153 LMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEM 212
++ +Y C S+++A +F++M N VS TT+I+ YA G +G+F ML G +
Sbjct: 124 VLQMYCE-CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 213 NPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYF 272
++ +++ + + FG+ IHA VI+ G SN + I++MY + L A + F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 273 DEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALS 331
D+M K + ++ GY ++G + + L +F + +E + F F+ ++ ACA+L L+
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 332 CGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYG 391
G+Q+HA + + GL+ +++ L+D Y KC + + + F E+ + + V+W++++ GY
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 392 AHGHGKEAIELFDEM-VKSGVRPDRIVFMAVLTACS-----------HA----------- 428
+EA++ F + K+ + + ++ ACS HA
Sbjct: 363 QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ 422
Query: 429 -------------GLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKS 475
G +D+ + F+SM+ NP+ + + G EA L +
Sbjct: 423 YGESALITMYSKCGCLDDANEVFESMD----NPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 476 M---PFKPDESVWGPLLGACKEHRLPNLGKL---AALRVLDLKPNMMGTYIILSNIYAAE 529
M KP+ + +L AC L GK LR ++ P + Y + +IYA
Sbjct: 479 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT-IDHYDCMIDIYARS 537
Query: 530 GKWEEFAKFRKIM 542
G +E KF K M
Sbjct: 538 GLLDEALKFMKNM 550
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 349 bits (896), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 189/540 (35%), Positives = 311/540 (57%), Gaps = 12/540 (2%)
Query: 24 QSLQSVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVM 83
Q L + KK I +P +++ T L+ Y G I+ A +F+++ R+VV WT M
Sbjct: 156 QDLDNGKK--IHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSM 213
Query: 84 IAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGL 143
IAGY + + +F M N V N +T +++ AC + +L HG +K G+
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 144 EGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFK 203
E S + SL+D+Y C + NAR VFN+ + V WT +I GY H+G+ L +F+
Sbjct: 274 ELSSCLVTSLLDMYVKCG-DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 204 EMLLEGVEMNPYSFSIA--VRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCR 261
+M +GVE+ P +IA + C + G+ +H IK G + V N+++ MY +
Sbjct: 333 KM--KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAK 389
Query: 262 FDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSI 320
DA F+ +EKD++ WN+II+G+ ++GS E L +F +M SE +PN T S+
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449
Query: 321 IAACATLAALSCGQQVHAGIVRRGL--DGNLALANALIDMYAKCGNISDSQKIFSEMSDR 378
+ACA+L +L+ G +HA V+ G ++ + AL+D YAKCG+ ++ IF + ++
Sbjct: 450 FSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK 509
Query: 379 DLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYF 438
+ +TW++M+ GYG G ++ELF+EM+K +P+ F ++L+AC H G+V+EG KYF
Sbjct: 510 NTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYF 569
Query: 439 KSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRL 497
SM DYN P+ + Y C+VD+L RAG +++A ++I+ MP +PD +G L C H
Sbjct: 570 SSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSR 629
Query: 498 PNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIE 557
+LG++ ++LDL P+ Y+++SN+YA++G+W + + R +M+ G K G S +E
Sbjct: 630 FDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 236/497 (47%), Gaps = 50/497 (10%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+AT L+ Y G ++AR +FD++PE D W VM+ Y + ++ ++++
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG 137
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
+ S LKAC ++ L N +H +K ++ V L+D+YA C + +A
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCG-EIKSA 195
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
VFND+ +N V WT++I GY + GL +F M V N Y++ + AC
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ GK H ++K G + ++ S+LDMY + +S+A + F+E + DL+ W +I
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 288 AGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL- 345
GY +GS +E L++F KMK PNC T S+++ C + L G+ VH ++ G+
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
D N +ANAL+ MYAKC D++ +F S++D+V W S++ G+ +G EA+ LF
Sbjct: 376 DTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVN------------------ 447
M V P+ + ++ +AC+ G + G S++ Y+V
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVG----SSLHAYSVKLGFLASSSVHVGTALLDF 489
Query: 448 -------------------PNKEIYGCVVDLLGRAGRVKEAYELIKSM---PFKPDESVW 485
N + ++ G+ G + EL + M KP+ES +
Sbjct: 490 YAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTF 549
Query: 486 GPLLGACKEHRLPNLGK 502
+L AC + N GK
Sbjct: 550 TSILSACGHTGMVNEGK 566
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 187/345 (54%), Gaps = 16/345 (4%)
Query: 96 AWTVFVEMVRNEVNPNA---FTLSS----VLKACKGMKSLSNAALVHGMAIKEGLEGSIY 148
++T E++ E N + + SS +L C + SL + HG+ GL G I
Sbjct: 21 SFTTIKELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQS---HGVLTGNGLMGDIS 77
Query: 149 VENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLE 208
+ L+ +Y + D ARLVF+ + + W ++ Y + + ++ ++
Sbjct: 78 IATKLVSLYGFFGYTKD-ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKH 136
Query: 209 GVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDA 268
G + FS A++AC + GK IH ++K N+ V+ +LDMY + + A
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSA 195
Query: 269 NQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATL 327
++ F+++T ++++ W ++IAGY K+ E L +F++M+ N +T+ ++I AC L
Sbjct: 196 HKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKL 255
Query: 328 AALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMM 387
+AL G+ H +V+ G++ + L +L+DMY KCG+IS+++++F+E S DLV WT+M+
Sbjct: 256 SALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 388 IGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVD 432
+GY +G EA+ LF +M ++P+ + +VL+ C GL++
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 290/514 (56%), Gaps = 7/514 (1%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPN 111
L+ Y + G +E AR +FD M RDV+SW MI+GY N A +F MV V+ +
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD 217
Query: 112 AFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVF 171
T+ S+L C +K L VH + ++ L I V+N+L+++Y C MD AR VF
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG-RMDEARFVF 276
Query: 172 NDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVS 231
+ M+ ++ ++WT +I GY G+ L + + M EGV N + + V C V+
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 232 FGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAG-Y 290
GK +H ++ S++ + S++ MY + + + F ++ W+ IIAG
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 291 EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLA 350
+ S+ L +F +M+ E PN T S++ A A LA L +H + + G +L
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 351 LANALIDMYAKCGNISDSQKIFSEMSDR----DLVTWTSMMIGYGAHGHGKEAIELFDEM 406
A L+ +Y+KCG + + KIF+ + ++ D+V W +++ GYG HG G A+++F EM
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 407 VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGR 465
V+SGV P+ I F + L ACSH+GLV+EGL F+ M Y Y C+VDLLGRAGR
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGR 576
Query: 466 VKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNI 525
+ EAY LI ++PF+P +VWG LL AC H LG++AA ++ +L+P G Y++L+NI
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANI 636
Query: 526 YAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVR 559
YAA G+W++ K R +M +G +K+ G S IE+R
Sbjct: 637 YAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 222/455 (48%), Gaps = 8/455 (1%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
IL+T L +Y G I AR LF+EMP+ ++S+ ++I Y ++ A +VF+ MV
Sbjct: 51 ILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 107 EVN--PNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISM 164
V P+ +T V KA +KS+ +VHG ++ YV+N+L+ +Y +
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFG-KV 168
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRAC 224
+ AR VF+ MK ++ +SW T+I+GY +G L +F M+ E V+++ + + C
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 225 ASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
+ G+ +H V + G + V N++++MY + + +A FD M +D+ITW
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 285 TIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
+I GY + G E L + M+ E PN T S+++ C ++ G+ +H VR+
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
+ ++ + +LI MYAKC + ++FS S W++++ G + +A+ LF
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA 463
M + V P+ ++L A + + + + + + + +V + +
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 464 GRVKEAYELIKSMPFK---PDESVWGPLLGACKEH 495
G ++ A+++ + K D +WG L+ H
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 198/405 (48%), Gaps = 8/405 (1%)
Query: 116 SSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMK 175
S+L +S+S +H I G S ++ ++L YA C + AR +F +M
Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCG-HITYARKLFEEMP 76
Query: 176 WKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNP--YSFSIAVRACASTGWVSFG 233
+ +S+ +I Y G + + VF M+ EGV+ P Y++ +A + G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKS 293
++H +++ FG + V N++L MY F + A FD M +D+I+WNT+I+GY ++
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 294 G-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALA 352
G ++ L MF M +E + T S++ C L L G+ VH + + L + +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 353 NALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVR 412
NAL++MY KCG + +++ +F M RD++TWT M+ GY G + A+EL M GVR
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 413 PDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYEL 472
P+ + ++++ C A V++G V + I ++ + + RV + +
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 473 IKSMPFKPDESVWGPLLGACKEHRLPN--LGKLAALRVLDLKPNM 515
S K W ++ C ++ L + LG +R D++PN+
Sbjct: 377 F-SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 316/546 (57%), Gaps = 5/546 (0%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
L +L+ Y G + + +F+++ +++ VSWT MI+ Y +A F EM+++
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSI-YVENSLMDVYATCCISMDN 166
+ PN TL SVL +C + + VHG A++ L+ + + +L+++YA C + +
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECG-KLSD 357
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
V + +N V+W +LI+ YAH G LG+F++M+ + ++ + ++ + ++ AC +
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTI 286
G V GK IH VI+ V NS++DMY + + A+ F+++ + ++TWN++
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 287 IAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGL 345
+ G+ ++G+S E +++F M N TF ++I AC+++ +L G+ VH ++ GL
Sbjct: 477 LCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL 536
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
+L ALIDMYAKCG+++ ++ +F MS R +V+W+SM+ YG HG AI F++
Sbjct: 537 K-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQ 595
Query: 406 MVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGR 465
MV+SG +P+ +VFM VL+AC H+G V+EG YF M + V+PN E + C +DLL R+G
Sbjct: 596 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGD 655
Query: 466 VKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNI 525
+KEAY IK MPF D SVWG L+ C+ H+ ++ K + D+ + G Y +LSNI
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 715
Query: 526 YAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEML 585
YA EG+WEEF + R M+ KK G S IE+ KV F A ++ T +Y L L
Sbjct: 716 YAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Query: 586 IRHMNE 591
NE
Sbjct: 776 QNLTNE 781
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 211/391 (53%), Gaps = 4/391 (1%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR 105
+++ T+L+ Y G + +A +FD MP RD+V+W+ +++ +A +F MV
Sbjct: 136 AVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVD 195
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
+ V P+A T+ SV++ C + L A VHG ++ + + NSL+ +Y+ C +
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACA 225
+ R +F + KN VSWT +I+ Y L F EM+ G+E N + + +C
Sbjct: 256 SER-IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMN-SILDMYCRFDCLSDANQYFDEMTEKDLITWN 284
G + GK +H ++ N ++ +++++Y LSD +++++++ WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 285 TIIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
++I+ Y G + L +F +M ++R P+ FT S I+AC + G+Q+H ++R
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
+ + N+LIDMY+K G++ + +F+++ R +VTW SM+ G+ +G+ EAI LF
Sbjct: 435 DVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEG 434
D M S + + + F+AV+ ACS G +++G
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 222/423 (52%), Gaps = 5/423 (1%)
Query: 50 TNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVN 109
T LI+SY G + +R +F+ P D + V+I + + A ++ +V
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97
Query: 110 PNAFTLSSVLKACKGMKS-LSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNAR 168
+ F SVL+AC G + LS VHG IK G++ +E SL+ +Y ++ +A
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG-NLSDAE 156
Query: 169 LVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTG 228
VF+ M ++ V+W+TL++ +G L +FK M+ +GVE + + V CA G
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 229 WVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIA 288
+ + +H + + F + + NS+L MY + L + + F+++ +K+ ++W +I+
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMIS 276
Query: 289 GYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDG 347
Y + SE L FS+M PN T S++++C + + G+ VH VRR LD
Sbjct: 277 SYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 348 NL-ALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM 406
N +L+ AL+++YA+CG +SD + + +SDR++V W S++ Y G +A+ LF +M
Sbjct: 337 NYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 407 VKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRV 466
V ++PD + ++AC +AGLV G + + +V+ ++ + ++D+ ++G V
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSV 455
Query: 467 KEA 469
A
Sbjct: 456 DSA 458
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 195/377 (51%), Gaps = 19/377 (5%)
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
S D++RLVF + + + LI + ++ ++ E +++ + F +R
Sbjct: 49 SPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLR 108
Query: 223 ACA-STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
ACA S +S G +H +IK G + + S+L MY + LSDA + FD M +DL+
Sbjct: 109 ACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLV 168
Query: 282 TWNTIIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGI 340
W+T+++ ++G + L MF M + P+ T S++ CA L L + VH I
Sbjct: 169 AWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI 228
Query: 341 VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAI 400
R+ D + L N+L+ MY+KCG++ S++IF +++ ++ V+WT+M+ Y ++A+
Sbjct: 229 TRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKAL 288
Query: 401 ELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNV----NPNKE-IYGC 455
F EM+KSG+ P+ + +VL++C GL+ EG KS++ + V +PN E +
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREG----KSVHGFAVRRELDPNYESLSLA 344
Query: 456 VVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHR---LPNLGKLAALRVLDLK 512
+V+L G++ + +++ + + + W L+ + HR + LG + +K
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDR-NIVAWNSLI-SLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 513 PNMMGTYIILSNIYAAE 529
P+ + + S+I A E
Sbjct: 403 PD---AFTLASSISACE 416
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 347 bits (890), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 320/596 (53%), Gaps = 62/596 (10%)
Query: 52 LIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMV-RNEVNP 110
+IK Y + +AR LF+ MPERDV SW M++GY C + A +VF M +N+V+
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSW 191
Query: 111 NAF-----TLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
NA S + +AC KS N ALV L G + +++
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNC----LLGGFVKKKKIVE---------- 237
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGV--------------- 210
AR F+ M ++ VSW T+ITGYA SG +F E ++ V
Sbjct: 238 -ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM 296
Query: 211 ------------EMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFG----SNLPVMNS 254
E N S++ + G+V ++ A K F N+ N+
Sbjct: 297 VEEARELFDKMPERNEVSWNAML-----AGYVQGERMEMA---KELFDVMPCRNVSTWNT 348
Query: 255 ILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSS-ECLNMFSKMKSERFSPN 313
++ Y + +S+A FD+M ++D ++W +IAGY +SG S E L +F +M+ E N
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 314 CFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFS 373
+F+S ++ CA + AL G+Q+H +V+ G + + NAL+ MY KCG+I ++ +F
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 374 EMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDE 433
EM+ +D+V+W +M+ GY HG G+ A+ F+ M + G++PD +AVL+ACSH GLVD+
Sbjct: 469 EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 434 GLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGAC 492
G +YF +M DY V PN + Y C+VDLLGRAG +++A+ L+K+MPF+PD ++WG LLGA
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGAS 588
Query: 493 KEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVG 552
+ H L + AA ++ ++P G Y++LSN+YA+ G+W + K R MR G KK G
Sbjct: 589 RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPG 648
Query: 553 MSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
SWIE+++K F D+ ++ LE L M + Y ++HD+E E
Sbjct: 649 YSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEE 704
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDE 405
D ++ N I Y + G +++ ++F M V++ M+ GY +G + A +LFDE
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 406 MVKSGVRPDR-IVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRA- 463
M P+R +V V+ G V K+ + + P +++ L G A
Sbjct: 121 M------PERDLVSWNVMI----KGYV-RNRNLGKARELFEIMPERDVCSWNTMLSGYAQ 169
Query: 464 -GRVKEAYELIKSMPFKPDESVWGPLLGA 491
G V +A + MP K D S W LL A
Sbjct: 170 NGCVDDARSVFDRMPEKNDVS-WNALLSA 197
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/554 (33%), Positives = 320/554 (57%), Gaps = 13/554 (2%)
Query: 67 TLFDEMPER-DVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGM 125
TLF+ ++ DV SW +IA +A F M + + P + +KAC +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 126 KSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTL 185
+ + H A G + I+V ++L+ +Y+TC +++AR VF+++ +N VSWT++
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRNIVSWTSM 148
Query: 186 ITGYAHSGNGYGGLGVFKEMLLE------GVEMNPYSFSIAVRACASTGWVSFGKLIHAA 239
I GY +GN + +FK++L++ + ++ + AC+ + IH+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 240 VIKHGFGSNLPVMNSILDMYCRFD--CLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SS 296
VIK GF + V N++LD Y + ++ A + FD++ +KD +++N+I++ Y +SG S+
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 297 ECLNMFSKM-KSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANAL 355
E +F ++ K++ + N T ++++ A + AL G+ +H ++R GL+ ++ + ++
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 356 IDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDR 415
IDMY KCG + ++K F M ++++ +WT+M+ GYG HGH +A+ELF M+ SGVRP+
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 416 IVFMAVLTACSHAGLVDEGLKYFKSMN-DYNVNPNKEIYGCVVDLLGRAGRVKEAYELIK 474
I F++VL ACSHAGL EG ++F +M + V P E YGC+VDLLGRAG +++AY+LI+
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 475 SMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEE 534
M KPD +W LL AC+ H+ L +++ R+ +L + G Y++LS+IYA G+W++
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKD 508
Query: 535 FAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAY 594
+ R IM+ G K G S +E+ +V F+ D+ + +Y L L R + E Y
Sbjct: 509 VERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGY 568
Query: 595 EPDIDCLIHDLEGE 608
+ + HD++ E
Sbjct: 569 VSNTSSVCHDVDEE 582
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 182/357 (50%), Gaps = 11/357 (3%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+++ LI Y G +E+AR +FDE+P+R++VSWT MI GY A ++F +++ +E
Sbjct: 113 VSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDE 172
Query: 108 VNP------NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
+ ++ L SV+ AC + + +H IK G + + V N+L+D YA
Sbjct: 173 NDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGG 232
Query: 162 I-SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEG-VEMNPYSFSI 219
+ AR +F+ + K+ VS+ ++++ YA SG VF+ ++ V N + S
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 220 AVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKD 279
+ A + +G + GK IH VI+ G ++ V SI+DMYC+ + A + FD M K+
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKN 352
Query: 280 LITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCG-QQVH 337
+ +W +IAGY G +++ L +F M PN TF S++AAC+ G + +
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN 412
Query: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR-DLVTWTSMMIGYGAH 393
A R G++ L ++D+ + G + + + M + D + W+S++ H
Sbjct: 413 AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
I+ T++I Y G +E AR FD M ++V SWT MIAGY +A +F M+ +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 107 EVNPNAFTLSSVLKAC 122
V PN T SVL AC
Sbjct: 383 GVRPNYITFVSVLAAC 398
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 319/584 (54%), Gaps = 35/584 (5%)
Query: 59 EGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSV 118
EGL A ++F + E +++ W M G+ + A ++V M+ + PN++T V
Sbjct: 82 EGL-PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 119 LKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYA-------------------- 158
LK+C K+ +HG +K G + +YV SL+ +Y
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 159 ---TCCIS-------MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLE 208
T I ++NA+ +F+++ K+ VSW +I+GYA +GN L +FK+M+
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 209 GVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDA 268
V + + V ACA +G + G+ +H + HGFGSNL ++N+++D+Y + L A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 269 NQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATL 327
F+ + KD+I+WNT+I GY E L +F +M +PN T SI+ ACA L
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 328 AALSCGQQVHAGIVRR--GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTS 385
A+ G+ +H I +R G+ +L +LIDMYAKCG+I + ++F+ + + L +W +
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 386 MMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDY 444
M+ G+ HG + +LF M K G++PD I F+ +L+ACSH+G++D G F++M DY
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 445 NVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLA 504
+ P E YGC++DLLG +G KEA E+I M +PD +W LL ACK H LG+
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 505 ALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCG 564
A ++ ++P G+Y++LSNIYA+ G+W E AK R ++ G KK G S IE+ V
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 565 FIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
FI DK + +YG+LE + + + + PD ++ ++E E
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE 664
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 250/553 (45%), Gaps = 59/553 (10%)
Query: 42 PKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFV 101
P + T LIK Y G IE A+ LFDE+P +DVVSW MI+GY + +A +F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 102 EMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
+M++ V P+ T+ +V+ AC S+ VH G ++ + N+L+D+Y+ C
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
++ A +F + +K+ +SW TLI GY H L +F+EML G N + +
Sbjct: 316 -ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 222 RACASTGWVSFGKLIHAAVIKH--GFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKD 279
ACA G + G+ IH + K G + + S++DMY + + A+Q F+ + K
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 280 LITWNTIIAGYEKSGSSEC-LNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHA 338
L +WN +I G+ G ++ ++FS+M+ P+ TF +++AC+ L G+ +
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494
Query: 339 GIVRR-GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR-DLVTWTSMMIGYGAHGHG 396
+ + + L +ID+ G +++++ + M D V W S++ HG+
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554
Query: 397 KEAIELFDEMVK-SGVRPDRIVFMAVLTAC---------SHAGLVDEGLKYFKSMNDYNV 446
+ + ++K P V ++ + A + A L D+G+K + +
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614
Query: 447 NP--------------NKEIYGCVVD---LLGRAGRVKEAYELIKSMPFKPDESVWGPLL 489
+ N+EIYG + + LL +AG V + E+++ M E W
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM-----EEEWKE-- 667
Query: 490 GACKEHRLPNLGKLA-ALRVLDLKPNMMGTYI--------------ILSNIYAAEGKWEE 534
GA + H KLA A ++ KP T + ++S IY E +
Sbjct: 668 GALRHHS----EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARD 723
Query: 535 FAKFRKIMRGMGS 547
+F G+ S
Sbjct: 724 RTRFHHFRDGVCS 736
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 148/294 (50%), Gaps = 38/294 (12%)
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYC----RFDCLSDANQYFDEMTEKDLITWNTIIAG 289
++IHA +IK G + ++ +++ +C F+ L A F + E +L+ WNT+ G
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 290 YEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGN 348
+ S L ++ M S PN +TF ++ +CA A GQQ+H +++ G D +
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 349 LALANALIDMYAKCGNISD-------------------------------SQKIFSEMSD 377
L + +LI MY + G + D +QK+F E+
Sbjct: 169 LYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPV 228
Query: 378 RDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKY 437
+D+V+W +M+ GY G+ KEA+ELF +M+K+ VRPD + V++AC+ +G ++ G +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 438 FKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
++D+ N +I ++DL + G ++ A L + +P+K D W L+G
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 303/524 (57%), Gaps = 5/524 (0%)
Query: 80 WTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAI 139
W V + + +++ +++ M+R+ +P+AF+ +LK+C + + +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 140 KEGLEGSIYVENSLMDVYATCCISMDNARLVF--NDMKWKNDVSWTTLITGYAHSGNGYG 197
K G E +V +L+ +Y C + D AR VF N + V + LI+GY +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVAD-ARKVFEENPQSSQLSVCYNALISGYTANSKVTD 139
Query: 198 GLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILD 257
+F+ M GV ++ + V C ++ G+ +H +K G S + V+NS +
Sbjct: 140 AAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 258 MYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFT 316
MY + + + FDEM K LITWN +I+GY ++G + + L ++ +MKS P+ FT
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 317 FTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMS 376
S++++CA L A G +V + G N+ ++NA I MYA+CGN++ ++ +F M
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 377 DRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLK 436
+ LV+WT+M+ YG HG G+ + LFD+M+K G+RPD VF+ VL+ACSH+GL D+GL+
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 379
Query: 437 YFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEH 495
F++M +Y + P E Y C+VDLLGRAGR+ EA E I+SMP +PD +VWG LLGACK H
Sbjct: 380 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Query: 496 RLPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSW 555
+ ++ +LA +V++ +PN +G Y+++SNIY+ E + R +MR +K+ G S+
Sbjct: 440 KNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSY 499
Query: 556 IEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRHMNETAYEPDID 599
+E + +V F+A D+ T+ V+ +L+ L + E A D D
Sbjct: 500 VEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD 543
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 213/473 (45%), Gaps = 58/473 (12%)
Query: 20 PIIKQSLQ-SVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVV 78
P+ Q L V K +++P + T LI Y GL+ +AR +F+E P+ +
Sbjct: 69 PVSGQQLHCHVTKGGCETEP--------FVLTALISMYCKCGLVADARKVFEENPQSSQL 120
Query: 79 S--WTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHG 136
S + +I+GYT+ + A +F M V+ ++ T+ ++ C + L +HG
Sbjct: 121 SVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHG 180
Query: 137 MAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGY 196
+K GL+ + V NS + +Y C S++ R +F++M K ++W +I+GY+ +G Y
Sbjct: 181 QCVKGGLDSEVAVLNSFITMYMKCG-SVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 197 GGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSIL 256
L ++++M GV +P++ + +CA G G + V +GF N+ V N+ +
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 257 DMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSEC-LNMFSKMKSERFSPNCF 315
MY R L+ A FD M K L++W +I Y G E L +F M P+
Sbjct: 300 SMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGA 359
Query: 316 TFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALA------------NALIDMYAKCG 363
F +++AC+ H+G+ +GL+ A+ + L+D+ + G
Sbjct: 360 VFVMVLSACS-----------HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 364 NISDSQKIFSEMS-DRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVL 422
+ ++ + M + D W +++ H + A F ++++ P+ I + ++
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLM 466
Query: 423 TACSHAGLVDEGLKYFKSMNDYNVNPNKE-IYGCVVDLLGRAGRVKEAYELIK 474
+ N Y+ + N+E I+ V + RA R K Y ++
Sbjct: 467 S------------------NIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 304/575 (52%), Gaps = 10/575 (1%)
Query: 38 PPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAW 97
PP P LA LI Y E AR + P R+VVSWT +I+G + A
Sbjct: 39 PP-----PPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTAL 93
Query: 98 TVFVEMVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVY 157
F EM R V PN FT KA ++ +H +A+K G ++V S D+Y
Sbjct: 94 VEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMY 153
Query: 158 ATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSF 217
+ D+AR +F+++ +N +W I+ G + F E N +F
Sbjct: 154 CKTRLR-DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITF 212
Query: 218 SIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTE 277
+ AC+ ++ G +H V++ GF +++ V N ++D Y + + + F EM
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 278 KDLITWNTIIAGYEKSGSSECLN-MFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQV 336
K+ ++W +++A Y ++ E + ++ + + + + F +S+++ACA +A L G+ +
Sbjct: 273 KNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI 332
Query: 337 HAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHG 396
HA V+ ++ + + +AL+DMY KCG I DS++ F EM +++LVT S++ GY G
Sbjct: 333 HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQV 392
Query: 397 KEAIELFDEMVKSGV--RPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIY 453
A+ LF+EM G P+ + F+++L+ACS AG V+ G+K F SM Y + P E Y
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 454 GCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKP 513
C+VD+LGRAG V+ AYE IK MP +P SVWG L AC+ H P LG LAA + L P
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP 512
Query: 514 NMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGS 573
G +++LSN +AA G+W E R+ ++G+G KK G SWI V+++V F A D+
Sbjct: 513 KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHI 572
Query: 574 HTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLEGE 608
+ + L L M Y+PD+ ++DLE E
Sbjct: 573 LNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEE 607
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 185/561 (32%), Positives = 314/561 (55%), Gaps = 10/561 (1%)
Query: 45 PSILATNLI-KSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEM 103
P++ + N+I K+Y + I AR LFDE+P+ D VS+ +I+GY A +F M
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 104 VRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCIS 163
+ + FTLS ++ AC L +H ++ G + V N+ + Y+ +
Sbjct: 132 RKLGFEVDGFTLSGLIAACCDRVDLIKQ--LHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRA 223
+ + + + +++VSW ++I Y G L ++KEM+ +G +++ ++ + + A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRF---DCLSDANQYFDEMTEKDL 280
S + G+ H +IK GF N V + ++D Y + D + D+ + F E+ DL
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 281 ITWNTIIAGYE--KSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHA 338
+ WNT+I+GY + S E + F +M+ P+ +F + +AC+ L++ S +Q+H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 339 GIVRRGLDGN-LALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGK 397
++ + N +++ NALI +Y K GN+ D++ +F M + + V++ M+ GY HGHG
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 398 EAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCV 456
EA+ L+ M+ SG+ P++I F+AVL+AC+H G VDEG +YF +M + + + P E Y C+
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 457 VDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMM 516
+DLLGRAG+++EA I +MP+KP W LLGAC++H+ L + AA ++ ++P
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 517 GTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQ 576
Y++L+N+YA KWEE A RK MRG +K+ G SWIEV+ K F+A D +
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 577 YVYGVLEMLIRHMNETAYEPD 597
V LE +++ M + Y D
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMD 630
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 41 IPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVF 100
IP + LI Y+ G +++AR +FD MPE + VS+ MI GY +A ++
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 101 VEMVRNEVNPNAFTLSSVLKAC 122
M+ + + PN T +VL AC
Sbjct: 436 QRMLDSGIAPNKITFVAVLSAC 457
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 86/216 (39%), Gaps = 41/216 (18%)
Query: 316 TFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNIS--------- 366
TF ++ L G+ +HA V+ + + L+N +++Y+KCG +S
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 367 -----------------DSQ-----KIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFD 404
DS+ ++F E+ D V++ +++ GY A+ LF
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 405 EMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCV----VDLL 460
M K G D ++ AC + + K ++ ++V+ + Y V V
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC------DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 461 GRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHR 496
+ G ++EA + M DE W ++ A +H+
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHK 219
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 345 bits (885), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 314/560 (56%), Gaps = 5/560 (0%)
Query: 44 GPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEM 103
G + T+L+ Y GL+E+ +F MPER+ +W+ M++GY + +A VF
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 104 VRN--EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCC 161
+R E + + + ++VL + + +H + IK GL G + + N+L+ +Y+ C
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC- 269
Query: 162 ISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
S++ A +F+ +N ++W+ ++TGY+ +G + +F M G++ + Y+ +
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
AC+ ++ GK +H+ ++K GF +L +++DMY + CL+DA + FD + E+D+
Sbjct: 330 NACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVA 389
Query: 282 TWNTIIAGY-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGI 340
W ++I+GY + S + E L ++ +MK+ PN T S++ AC++LA L G+QVH
Sbjct: 390 LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 341 VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAI 400
++ G + + +AL MY+KCG++ D +F ++D+V+W +M+ G +G G EA+
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 401 ELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDY-NVNPNKEIYGCVVDL 459
ELF+EM+ G+ PD + F+ +++ACSH G V+ G YF M+D ++P + Y C+VDL
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 460 LGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTY 519
L RAG++KEA E I+S +W LL ACK H LG A +++ L TY
Sbjct: 570 LSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTY 629
Query: 520 IILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVY 579
+ LS IY A G+ + + K MR G KEVG SWIE++++ F+ D M +
Sbjct: 630 VQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETK 689
Query: 580 GVLEMLIRHMNETAYEPDID 599
++ ++ R M E + +D
Sbjct: 690 DLVCLVSRQMIEEGFVTVLD 709
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 253/484 (52%), Gaps = 41/484 (8%)
Query: 49 ATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTV---FVEMVR 105
A L+ Y G + +A ++F+ + +DVVSW +I GY+ + ++TV F EM
Sbjct: 52 ANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRA 111
Query: 106 NEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMD 165
++ PNA+TL+ + KA ++S + H + +K G IYV+ SL+ +Y + D
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEM--NPYSFSIAVRA 223
+ VF M +N +W+T+++GYA G + VF L E E + Y F+ + +
Sbjct: 172 GLK-VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSS 230
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
A+T +V G+ IH IK+G + + N+++ MY + + L++A + FD +++ ITW
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 284 NTIIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
+ ++ GY ++G S E + +FS+M S P+ +T ++ AC+ + L G+Q+H+ +++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
G + +L AL+DMYAK G ++D++K F + +RD+ WTS++ GY + +EA+ L
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 403 FDEMVKSGVRPDRIVFMAVLTACS-----------HAGLVDEGLK------------YFK 439
+ M +G+ P+ +VL ACS H + G Y K
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 440 --SMNDYNV----NPNKEI--YGCVVDLLGRAGRVKEAYELIKSM---PFKPDESVWGPL 488
S+ D N+ PNK++ + ++ L G+ EA EL + M +PD+ + +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 489 LGAC 492
+ AC
Sbjct: 531 ISAC 534
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 208/392 (53%), Gaps = 10/392 (2%)
Query: 105 RNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISM 164
+ E+NP+ TL L ++L VHG I+ G I N L++ YA C +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG-KL 65
Query: 165 DNARLVFNDMKWKNDVSWTTLITGYAHSG---NGYGGLGVFKEMLLEGVEMNPYSFSIAV 221
A +FN + K+ VSW +LITGY+ +G + Y + +F+EM + + N Y+ +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 222 RACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLI 281
+A +S + G+ HA V+K ++ V S++ MYC+ + D + F M E++
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 282 TWNTIIAGYEKSGSSE----CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVH 337
TW+T+++GY G E N+F + K E S + + FT+++++ A + G+Q+H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGK 397
++ GL G +AL+NAL+ MY+KC +++++ K+F DR+ +TW++M+ GY +G
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 398 EAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVV 457
EA++LF M +G++P + VL ACS ++EG + + + +V
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 458 DLLGRAGRVKEAYELIKSMPFKPDESVWGPLL 489
D+ +AG + +A + + + D ++W L+
Sbjct: 365 DMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/568 (34%), Positives = 322/568 (56%), Gaps = 12/568 (2%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMV-RN 106
+ ++ I Y + G IE +R +FD ER++ W MI Y +C ++ +F+E +
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
E+ + T A ++ + HG K E I + NSLM +Y+ C S+
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG-SVHK 371
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
+ VF M+ ++ VSW T+I+ + +G GL + EM +G +++ + + + A ++
Sbjct: 372 SFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASN 431
Query: 227 TGWVSFGKLIHAAVIKHGFGSNLPVMNS-ILDMYCRFDCLSDANQYFDE--MTEKDLITW 283
GK HA +I+ G MNS ++DMY + + + + F+ E+D TW
Sbjct: 432 LRNKEIGKQTHAFLIRQGI--QFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATW 489
Query: 284 NTIIAGYEKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
N++I+GY ++G +E +F KM + PN T SI+ AC+ + ++ G+Q+H +R
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
+ LD N+ +A+AL+DMY+K G I ++ +FS+ +R+ VT+T+M++GYG HG G+ AI L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 403 FDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLG 461
F M +SG++PD I F+AVL+ACS++GL+DEGLK F+ M + YN+ P+ E Y C+ D+LG
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLG 669
Query: 462 RAGRVKEAYELIKSMPFKPD-ESVWGPLLGACKEHRLPNLGKLAALRV--LDLKPNMMGT 518
R GRV EAYE +K + + + +WG LLG+CK H L + + R+ D N G
Sbjct: 670 RVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGY 729
Query: 519 YIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYV 578
++LSN+YA E KW+ K R+ MR G KKEVG S IE+ V F++ D+ H+ +
Sbjct: 730 EVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Query: 579 YGVLEMLIRHMNETAYEPDIDCLIHDLE 606
Y V++ L + M ++ + + LE
Sbjct: 790 YDVIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/518 (26%), Positives = 250/518 (48%), Gaps = 39/518 (7%)
Query: 30 KKSSIQSDPPLIPKGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTS 89
+ SS S P L P+ PSI + + +G + AR LFD +P+ V W +I G+
Sbjct: 25 RHSSTFSPPTLTPQTPSIRSR--LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFIC 82
Query: 90 FNCHNQAWTVFVEMVRNE--VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSI 147
N ++A + M + N +A+T SS LKAC K+L VH I+ S
Sbjct: 83 NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR 142
Query: 148 YVENSLMDVYATC-----CISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVF 202
V NSLM++Y +C C D R VF++M+ KN V+W TLI+ Y +G F
Sbjct: 143 VVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQF 202
Query: 203 KEMLLEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHG--FGSNLPVMNSILDMYC 260
M+ V+ +P SF A + + + + + ++K G + +L V++S + MY
Sbjct: 203 GIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYA 262
Query: 261 RFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGS-SECLNMF-SKMKSERFSPNCFTFT 318
+ + + FD E+++ WNT+I Y ++ E + +F + S+ + T+
Sbjct: 263 ELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYL 322
Query: 319 SIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDR 378
+A + L + G+Q H + + + + + N+L+ MY++CG++ S +F M +R
Sbjct: 323 LAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRER 382
Query: 379 DLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACS-----------H 427
D+V+W +M+ + +G E + L EM K G + D I A+L+A S H
Sbjct: 383 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTH 442
Query: 428 AGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPF-KPDESVWG 486
A L+ +G++ F+ MN Y ++D+ ++G ++ + +L + + + D++ W
Sbjct: 443 AFLIRQGIQ-FEGMNSY-----------LIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 487 PLLGACKEHRLPNLGKLAALRVLD--LKPNMMGTYIIL 522
++ ++ L ++L+ ++PN + IL
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 222/414 (53%), Gaps = 10/414 (2%)
Query: 66 RTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKGM 125
R +FD M ++VV+W +I+ Y + +A F M+R EV P+ + +V A
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 126 KSLSNAALVHGMAIKEGLE--GSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWT 183
+S+ A + +G+ +K G E ++V +S + +YA ++++R VF+ +N W
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG-DIESSRRVFDSCVERNIEVWN 286
Query: 184 TLITGYAHSGNGYGGLGVFKEML-LEGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIK 242
T+I Y + + +F E + + + + ++ +A A ++ V G+ H V K
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 243 HGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNM 301
+ + ++NS++ MY R + + F M E+D+++WNT+I+ + ++G E L +
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 302 FSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAK 361
+M+ + F + T T++++A + L G+Q HA ++R+G+ + + LIDMY+K
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSK 465
Query: 362 CGNISDSQKIF--SEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFM 419
G I SQK+F S ++RD TW SM+ GY +GH ++ +F +M++ +RP+ +
Sbjct: 466 SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVA 525
Query: 420 AVLTACSHAGLVDEGLKYFK-SMNDYNVNPNKEIYGCVVDLLGRAGRVKEAYEL 472
++L ACS G VD G + S+ Y ++ N + +VD+ +AG +K A ++
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDM 578
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 344 bits (882), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/519 (34%), Positives = 300/519 (57%), Gaps = 11/519 (2%)
Query: 98 TVFVEMVRNEVNPNAFT--------LSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYV 149
+V + EV+P ++ + +L+ C ++ A HG I+ LEG + +
Sbjct: 39 SVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTL 98
Query: 150 ENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEG 209
N L++ Y+ C ++ AR VF+ M ++ VSW T+I Y + L +F EM EG
Sbjct: 99 LNVLINAYSKCGF-VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 210 VEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDAN 269
+ + ++ S + AC K +H +K NL V ++LD+Y + + DA
Sbjct: 158 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAV 217
Query: 270 QYFDEMTEKDLITWNTIIAGY-EKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLA 328
Q F+ M +K +TW++++AGY + E L ++ + + N FT +S+I AC+ LA
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 329 ALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMI 388
AL G+Q+HA I + G N+ +A++ +DMYAKCG++ +S IFSE+ +++L W +++
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS 337
Query: 389 GYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSM-NDYNVN 447
G+ H KE + LF++M + G+ P+ + F ++L+ C H GLV+EG ++FK M Y ++
Sbjct: 338 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 397
Query: 448 PNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALR 507
PN Y C+VD+LGRAG + EAYELIKS+PF P S+WG LL +C+ ++ L ++AA +
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEK 457
Query: 508 VLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIA 567
+ +L+P G +++LSNIYAA +WEE AK RK++R KK G SWI+++DKV F
Sbjct: 458 LFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSV 517
Query: 568 NDKMGSHTQYVYGVLEMLIRHMNETAYEPDIDCLIHDLE 606
+ + + L+ L+ + Y+P ++ +HD+E
Sbjct: 518 GESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVE 556
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 186/348 (53%), Gaps = 4/348 (1%)
Query: 43 KGPSILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVE 102
+G L LI +Y G +E AR +FD M ER +VSW MI YT ++A +F+E
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 103 MVRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCI 162
M + FT+SSVL AC +H +++K ++ ++YV +L+D+YA C +
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 163 SMDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVR 222
D + VF M+ K+ V+W++++ GY + N L +++ +E N ++ S +
Sbjct: 213 IKDAVQ-VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
AC++ + GK +HA + K GFGSN+ V +S +DMY + L ++ F E+ EK+L
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 283 WNTIIAGYEKSGS-SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGI- 340
WNTII+G+ K E + +F KM+ + PN TF+S+++ C + G++ +
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 341 VRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMS-DRDLVTWTSMM 387
GL N+ + ++D+ + G +S++ ++ + D W S++
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/500 (36%), Positives = 289/500 (57%), Gaps = 8/500 (1%)
Query: 111 NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLV 170
++ T S ++K C +++ L+ G +++ N L+++Y + +++A +
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL-LNDAHQL 118
Query: 171 FNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWV 230
F+ M +N +SWTT+I+ Y+ L + ML + V N Y++S +R+C V
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 231 SFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGY 290
+++H +IK G S++ V ++++D++ + DA FDEM D I WN+II G+
Sbjct: 179 ---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 291 EKSGSSE-CLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNL 349
++ S+ L +F +MK F T TS++ AC LA L G Q H IV+ D +L
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDL 293
Query: 350 ALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKS 409
L NAL+DMY KCG++ D+ ++F++M +RD++TW++M+ G +G+ +EA++LF+ M S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 410 GVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMND-YNVNPNKEIYGCVVDLLGRAGRVKE 468
G +P+ I + VL ACSHAGL+++G YF+SM Y ++P +E YGC++DLLG+AG++ +
Sbjct: 354 GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDD 413
Query: 469 AYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIILSNIYAA 528
A +L+ M +PD W LLGAC+ R L + AA +V+ L P GTY +LSNIYA
Sbjct: 414 AVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYAN 473
Query: 529 EGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVLEMLIRH 588
KW+ + R MR G KKE G SWIEV ++ FI D V L LI
Sbjct: 474 SQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHR 533
Query: 589 MNETAYEPDIDCLIHDLEGE 608
+ Y P+ + ++ DLEGE
Sbjct: 534 LTGIGYVPETNFVLQDLEGE 553
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 191/343 (55%), Gaps = 9/343 (2%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
L LI Y L+ +A LFD+MP+R+V+SWT MI+ Y+ H +A + V M+R+
Sbjct: 98 LVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN 157
Query: 108 VNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNA 167
V PN +T SSVL++C GM S+ ++H IKEGLE ++V ++L+DV+A ++A
Sbjct: 158 VRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG-EPEDA 213
Query: 168 RLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAST 227
VF++M + + W ++I G+A + L +FK M G + + +RAC
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 228 GWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTII 287
+ G H ++K + +L + N+++DMYC+ L DA + F++M E+D+ITW+T+I
Sbjct: 274 ALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 288 AGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR-RGL 345
+G ++G S E L +F +MKS PN T ++ AC+ L G + + G+
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 346 DGNLALANALIDMYAKCGNISDSQKIFSEMS-DRDLVTWTSMM 387
D +ID+ K G + D+ K+ +EM + D VTW +++
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 173/339 (51%), Gaps = 12/339 (3%)
Query: 209 GVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDA 268
G+ + ++S ++ C S V G LI + +G + ++N +++MY +F+ L+DA
Sbjct: 56 GLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 269 NQYFDEMTEKDLITWNTIIAGYEKSG-SSECLNMFSKMKSERFSPNCFTFTSIIAACATL 327
+Q FD+M ++++I+W T+I+ Y K + L + M + PN +T++S++ +C +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 328 AALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMM 387
+ + + +H GI++ GL+ ++ + +ALID++AK G D+ +F EM D + W S++
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 388 IGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVN 447
G+ + A+ELF M ++G ++ +VL AC+ L++ G++ + Y +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--D 290
Query: 448 PNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGACKE--HRLPNLGKLAA 505
+ + +VD+ + G +++A + M + D W ++ + + L
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 506 LRVLDLKPN---MMGTYIILSNIYAAEGKWEEFAKFRKI 541
++ KPN ++G S+ E W F +K+
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 31/156 (19%)
Query: 47 ILATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRN 106
IL L+ Y G +E+A +F++M ERDV++W+ MI+G +A +F M +
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYAT------- 159
PN T+ VL AC S+A L LE Y S+ +Y
Sbjct: 354 GTKPNYITIVGVLFAC------SHAGL---------LEDGWYYFRSMKKLYGIDPVREHY 398
Query: 160 -CCI-------SMDNARLVFNDMKWKND-VSWTTLI 186
C I +D+A + N+M+ + D V+W TL+
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/566 (33%), Positives = 321/566 (56%), Gaps = 11/566 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNE 107
+A +LI Y + AR LFDEMP RD+ SW MI+GY +A T+ N
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNG 241
Query: 108 VNP-NAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+ ++ T+ S+L AC + +H +IK GLE ++V N L+D+YA + +
Sbjct: 242 LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG-RLRD 300
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACAS 226
+ VF+ M ++ +SW ++I Y + + +F+EM L ++ + + +
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 227 TGWVSFGKLIHAAVIKHG-FGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
G + + + ++ G F ++ + N+++ MY + + A F+ + D+I+WNT
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 286 IIAGYEKSG-SSECLNMFSKMKSE-RFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRR 343
II+GY ++G +SE + M++ M+ E + N T+ S++ AC+ AL G ++H +++
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 344 GLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
GL ++ + +L DMY KCG + D+ +F ++ + V W +++ +G HGHG++A+ LF
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 404 DEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMN-DYNVNPNKEIYGCVVDLLGR 462
EM+ GV+PD I F+ +L+ACSH+GLVDEG F+ M DY + P+ + YGC+VD+ GR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYIIL 522
AG+++ A + IKSM +PD S+WG LL AC+ H +LGK+A+ + +++P +G +++L
Sbjct: 601 AGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLL 660
Query: 523 SNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEVRDKVCGFIANDKMGSHTQYVYGVL 582
SN+YA+ GKWE + R I G G +K G S +EV +KV F ++ + +Y L
Sbjct: 661 SNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYREL 720
Query: 583 EMLIRHMNETAYEPDIDCLIHDLEGE 608
L + Y PD ++ D+E +
Sbjct: 721 TALQAKLKMIGYVPDHRFVLQDVEDD 746
Score = 219 bits (557), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 262/499 (52%), Gaps = 27/499 (5%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVF-VEMVRN 106
++ L+ Y G + AR FD + RDV +W +MI+GY ++ F + M+ +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDN 166
+ P+ T SVLKAC +++ + +H +A+K G +YV SL+ +Y+ ++ N
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR-YKAVGN 203
Query: 167 ARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVE-MNPYSFSIAVRACA 225
AR++F++M ++ SW +I+GY SGN L L G+ M+ + + AC
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLSACT 258
Query: 226 STGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNT 285
G + G IH+ IKHG S L V N ++D+Y F L D + FD M +DLI+WN+
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 286 IIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRG 344
II YE + +++F +M+ R P+C T S+ + + L + + V +R+G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 345 -LDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELF 403
++ + NA++ MYAK G + ++ +F+ + + D+++W +++ GY +G EAIE++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 404 DEMVKSG-VRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVVDLLGR 462
+ M + G + ++ +++VL ACS AG + +G+K + + + + + D+ G+
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 463 AGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAAL---RVLD--LKPNMMG 517
GR+++A L +P + + W L+ AC H G+ A + +LD +KP+ +
Sbjct: 499 CGRLEDALSLFYQIP-RVNSVPWNTLI-AC--HGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 518 TYIILSNIYAA----EGKW 532
+LS + EG+W
Sbjct: 555 FVTLLSACSHSGLVDEGQW 573
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 321/557 (57%), Gaps = 21/557 (3%)
Query: 9 YAATFH-CHKIPPIIK--QSLQSVKKSSIQSDPPLIPKGPSILATNLIKSYFDEGL-IEE 64
YA+ C+K+ I Q V KS +++D + +L+ YF G + E
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNV--------GNSLLSLYFKLGPGMRE 115
Query: 65 ARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVRNEVNPNAFTLSSVLKACKG 124
R +FD +D +SWT M++GY + H +A VFVEMV ++ N FTLSS +KAC
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 125 MKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCISMDNARLVFNDMKWKNDVSWTT 184
+ + HG+ I G E + ++ ++L +Y +D AR VF++M + + WT
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWTA 234
Query: 185 LITGYAHSGNGYGGLGVFKEMLL-EGVEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKH 243
+++ ++ + LG+F M +G+ + +F + AC + + GK IH +I +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 244 GFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYEKSGSSE-CLNMF 302
G GSN+ V +S+LDMY + + +A Q F+ M++K+ ++W+ ++ GY ++G E + +F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 303 SKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANALIDMYAKC 362
+M+ + + + F +++ ACA LAA+ G+++H VRRG GN+ + +ALID+Y K
Sbjct: 355 REMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKS 410
Query: 363 GNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPDRIVFMAVL 422
G I + +++S+MS R+++TW +M+ +G G+EA+ F++MVK G++PD I F+A+L
Sbjct: 411 GCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 423 TACSHAGLVDEGLKYFKSM-NDYNVNPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPD 481
TAC H G+VDEG YF M Y + P E Y C++DLLGRAG +EA L++ + D
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRND 530
Query: 482 ESVWGPLLGACKEHR-LPNLGKLAALRVLDLKPNMMGTYIILSNIYAAEGKWEEFAKFRK 540
S+WG LLG C + + + A R+++L+P +Y++LSN+Y A G+ + RK
Sbjct: 531 ASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRK 590
Query: 541 IMRGMGSKKEVGMSWIE 557
+M G K VG SWI+
Sbjct: 591 LMVRRGVAKTVGQSWID 607
Score = 116 bits (290), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 138/285 (48%), Gaps = 4/285 (1%)
Query: 210 VEMNPYSFSIAVRACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFD-CLSDA 268
+ P ++ ++ C G HA V+K G ++ V NS+L +Y + + +
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 269 NQYFDEMTEKDLITWNTIIAGYEKSGSS-ECLNMFSKMKSERFSPNCFTFTSIIAACATL 327
+ FD KD I+W ++++GY + L +F +M S N FT +S + AC+ L
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 328 AALSCGQQVHAGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMM 387
+ G+ H ++ G + N +++ L +Y D++++F EM + D++ WT+++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 388 IGYGAHGHGKEAIELFDEMVK-SGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNV 446
+ + +EA+ LF M + G+ PD F VLTAC + + +G + + +
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 447 NPNKEIYGCVVDLLGRAGRVKEAYELIKSMPFKPDESVWGPLLGA 491
N + ++D+ G+ G V+EA ++ M K + W LLG
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGG 340
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 42/305 (13%)
Query: 296 SECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLALANAL 355
+E + + + S + S++ C + + G Q HA +V+ GL+ + + N+L
Sbjct: 43 TEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSL 102
Query: 356 IDMYAKCG-NISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEMVKSGVRPD 414
+ +Y K G + +++++F +D ++WTSMM GY +A+E+F EMV G+ +
Sbjct: 103 LSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN 162
Query: 415 RIVFMAVLTACSHAGLVDEG---------------------LKYFKSMNDYNVN------ 447
+ + ACS G V G L Y +N V+
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 448 ----PNKEIYGCVVDLLGRAGRVKEA----YELIKSMPFKPDESVWGPLLGACKEHRLPN 499
P+ + V+ + +EA Y + + PD S +G +L AC R
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 500 LGKLAALRVLDLKPNMMGTYIIL-SNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEV 558
GK +++ N +G+ +++ S++ GK + R++ GM K V SW +
Sbjct: 283 QGKEIHGKLI---TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSV--SWSAL 337
Query: 559 RDKVC 563
C
Sbjct: 338 LGGYC 342
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 341 bits (875), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 294/518 (56%), Gaps = 10/518 (1%)
Query: 48 LATNLIKSYFDEGLIEEARTLFDEMPERDVVSWTVMIAGYTSFNCHNQAWTVFVEMVR-N 106
+ T L+ Y G +E A +FDEMP+RD+V+W MI+G++ C +F++M R +
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 107 EVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATC-CISMD 165
++PN T+ + A +L VHG + G + V+ ++DVYA CI
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIY- 258
Query: 166 NARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEMLL-EGVEM-NPYSFSIAVRA 223
AR VF+ KN+V+W+ +I GY + VF +ML+ + V M P + + +
Sbjct: 259 -ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMG 317
Query: 224 CASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITW 283
CA G +S G+ +H +K GF +L V N+I+ Y ++ L DA + F E+ KD+I++
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 284 NTIIAG-YEKSGSSECLNMFSKMKSERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVR 342
N++I G E +F +M++ P+ T ++ AC+ LAAL G H V
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV 437
Query: 343 RGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIEL 402
G N ++ NAL+DMY KCG + ++++F M RD+V+W +M+ G+G HG GKEA+ L
Sbjct: 438 HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 403 FDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMN--DYNVNPNKEIYGCVVDLL 460
F+ M ++GV PD + +A+L+ACSH+GLVDEG + F SM+ D+NV P + Y C+ DLL
Sbjct: 498 FNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 461 GRAGRVKEAYELIKSMPFKPDESVWGPLLGACKEHRLPNLGKLAALRVLDLKPNMMGTYI 520
RAG + EAY+ + MPF+PD V G LL AC ++ LG + ++ L + +
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET-TESLV 616
Query: 521 ILSNIYAAEGKWEEFAKFRKIMRGMGSKKEVGMSWIEV 558
+LSN Y+A +WE+ A+ R I + G K G SW++V
Sbjct: 617 LLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 224/452 (49%), Gaps = 12/452 (2%)
Query: 46 SILATNLIKSYFDEGLIEEARTLFDEMPERDV--VSWTVMIAGYTSFNCHNQAWTVFVEM 103
S + NL + Y +E AR +FDE+P + ++W +MI Y S + +A ++ +M
Sbjct: 35 STVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKM 94
Query: 104 VRNEVNPNAFTLSSVLKACKGMKSLSNAALVHGMAIKEGLEGSIYVENSLMDVYATCCIS 163
+ + V P +T VLKAC G++++ + L+H +YV +L+D YA C
Sbjct: 95 LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCG-E 153
Query: 164 MDNARLVFNDMKWKNDVSWTTLITGYAHSGNGYGGLGVFKEM-LLEGVEMNPYSFSIAVR 222
++ A VF++M ++ V+W +I+G++ +G+F +M ++G+ N +
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 223 ACASTGWVSFGKLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLIT 282
A G + GK +H + GF ++L V ILD+Y + C+ A + FD +K+ +T
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 283 WNTIIAGY-EKSGSSECLNMFSKM----KSERFSPNCFTFTSIIAACATLAALSCGQQVH 337
W+ +I GY E E +F +M +P I+ CA LS G+ VH
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVH 331
Query: 338 AGIVRRGLDGNLALANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGK 397
V+ G +L + N +I YAK G++ D+ + FSE+ +D++++ S++ G + +
Sbjct: 332 CYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPE 391
Query: 398 EAIELFDEMVKSGVRPDRIVFMAVLTACSHAGLVDEGLKYFKSMNDYNVNPNKEIYGCVV 457
E+ LF EM SG+RPD + VLTACSH + G + N I ++
Sbjct: 392 ESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALM 451
Query: 458 DLLGRAGRVKEAYELIKSMPFKPDESVWGPLL 489
D+ + G++ A + +M K D W +L
Sbjct: 452 DMYTKCGKLDVAKRVFDTM-HKRDIVSWNTML 482
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 194/424 (45%), Gaps = 52/424 (12%)
Query: 117 SVLKACKGMKSLSNAALVHGMAIKEGLE-GSIYVENSLMDVYATCCISMDNARLVFNDMK 175
S+L+ C ++L ++H +K L S V +L +YA+C ++ AR VF+++
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCN-EVELARHVFDEIP 62
Query: 176 WK--NDVSWTTLITGYAHSGNGYGGLGVFKEMLLEGVEMNPYSFSIAVRACASTGWVSFG 233
N ++W +I YA + L ++ +ML GV Y++ ++ACA + G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 234 KLIHAAVIKHGFGSNLPVMNSILDMYCRFDCLSDANQYFDEMTEKDLITWNTIIAGYE-K 292
KLIH+ V F +++ V +++D Y + L A + FDEM ++D++ WN +I+G+
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 293 SGSSECLNMFSKMKS-ERFSPNCFTFTSIIAACATLAALSCGQQVHAGIVRRGLDGNLAL 351
++ + +F M+ + SPN T + A AL G+ VH R G +L +
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 352 ANALIDMYAKCGNISDSQKIFSEMSDRDLVTWTSMMIGYGAHGHGKEAIELFDEM----- 406
++D+YAK I ++++F ++ VTW++M+ GY + KEA E+F +M
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 407 --------------------------------VKSGVRPDRIVFMAVLTACSHAGLVDEG 434
VK+G D V +++ + G + +
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 435 LKYFKSMNDYNV-NPNKEIYGCVVDLLGRAGRVKEAYELIKSMP---FKPDESVWGPLLG 490
+ F + +V + N I GCVV+ R +E++ L M +PD + +L
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNC-----RPEESFRLFHEMRTSGIRPDITTLLGVLT 417
Query: 491 ACKE 494
AC
Sbjct: 418 ACSH 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,234,308
Number of Sequences: 539616
Number of extensions: 9548044
Number of successful extensions: 32311
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 23285
Number of HSP's gapped (non-prelim): 2369
length of query: 609
length of database: 191,569,459
effective HSP length: 123
effective length of query: 486
effective length of database: 125,196,691
effective search space: 60845591826
effective search space used: 60845591826
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)