Your job contains 1 sequence.
>007291
MAASTTSPNSCSWGKSQILNPFSSSLVDKGFPTKSIALKKKPNKSLKVESALHSPSVLHF
PKQPYPNPVITRPDSTAKPDNKSNKSQGQTQQSQWNPLQRAAAMALDMAENALVSRERQH
PLPKTADPRVQIGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFF
DGDGMVHAVTIGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYA
RGLFGLVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK
STMIAHPKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAIT
ENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFH
LWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESD
QVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPF
FLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSRVPYGFHGTFV
DSKDLVNQA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007291
(609 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 2116 4.4e-226 2
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 2154 4.1e-223 1
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 2037 1.0e-210 1
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 1997 1.8e-206 1
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 1566 8.4e-161 1
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 940 1.8e-94 1
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 861 4.3e-86 1
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 248 1.0e-32 3
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 159 4.5e-29 3
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 249 2.9e-26 2
ASPGD|ASPL0000067272 - symbol:AN7062 species:162425 "Emer... 250 7.6e-24 2
UNIPROTKB|Q2KEQ1 - symbol:MGCH7_ch7g985 "Putative unchara... 185 1.6e-23 3
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 204 4.3e-23 2
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 247 6.7e-18 1
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 247 6.7e-18 1
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 231 1.7e-16 1
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 231 1.7e-16 1
UNIPROTKB|Q52008 - symbol:lsdB "Lignostilbene-alpha,beta-... 151 2.5e-15 2
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 143 1.9e-13 2
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 145 3.8e-13 2
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 142 1.6e-12 2
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 144 3.2e-12 2
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 155 7.7e-12 2
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 124 2.0e-10 3
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 115 1.3e-09 2
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 109 1.3e-09 3
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 116 1.8e-09 3
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 116 2.3e-09 2
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 125 3.6e-09 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 130 6.0e-09 2
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 116 3.5e-08 2
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 120 8.7e-08 2
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 94 1.3e-07 3
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 126 1.5e-07 2
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 105 1.8e-07 3
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 130 1.7e-06 2
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 117 2.5e-06 2
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 121 3.5e-06 2
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 121 3.5e-06 2
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 120 3.8e-06 2
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 104 4.6e-06 2
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 117 8.0e-06 2
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 134 2.0e-05 1
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 133 2.6e-05 1
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 133 2.6e-05 1
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 120 3.8e-05 2
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 110 9.1e-05 2
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 116 0.00012 2
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 105 0.00020 2
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 124 0.00025 1
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 121 0.00053 1
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 121 0.00053 1
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 2116 (749.9 bits), Expect = 4.4e-226, Sum P(2) = 4.4e-226
Identities = 392/544 (72%), Positives = 458/544 (84%)
Query: 67 NPVITRPDSTAKPDNKS-NKSQGQTQQSQWNPLQRXXXXXXXXXXXXXVSRERQHPLPKT 125
N V P+ P+ S N + S+WNPLQR + RER PLPKT
Sbjct: 47 NSVSDTPNLLNFPNYPSPNPIIPEKDTSRWNPLQRAASAALDFAETALLRRERSKPLPKT 106
Query: 126 ADPRVQIGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFFDGDGM 185
DPR QI GN+APVPE+ V+ L V G IP+CI+GVYLRNGANPLFEPV+GHH FDGDGM
Sbjct: 107 VDPRHQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLFDGDGM 166
Query: 186 VHAVTIGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFG 245
VHAV I NG ASY+CRFTET+RL+QE++LG P+FPKAIGELHGH+GI RL+LFYARGLFG
Sbjct: 167 VHAVKITNGDASYSCRFTETERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFG 226
Query: 246 LVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIA 305
L++HK GTGVANAGLVYF++R+LAMSEDDLPYQVR+T +GDLET+GR++F+ QL S MIA
Sbjct: 227 LLNHKNGTGVANAGLVYFHDRLLAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIA 286
Query: 306 HPKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVV 365
HPK+DPV+KELFALSYDVV+KPYLKYF+FS +G+KSPDVEI L PTMMHDFAITENFVV
Sbjct: 287 HPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFAITENFVV 346
Query: 366 IPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAW 425
IPDQQVVFKL +M G SPV YD K SRFGIL +NAKD+++++W+ESP+TFCFHLWNAW
Sbjct: 347 IPDQQVVFKLSDMFLGKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAW 406
Query: 426 EEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLE 485
E PETDE+VVIGSCMTPADSIFNECDE L SVLSEIRLNLKTG+STRR I+ S Q+NLE
Sbjct: 407 ESPETDEVVVIGSCMTPADSIFNECDEQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLE 466
Query: 486 AGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRD 545
AGMVNRN LGRKT++AYLAIAEPWPKVSGFAKVDLS+GEVK +FYG KYGGEPFFLPR
Sbjct: 467 AGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLSTGEVKNHFYGGKKYGGEPFFLPRG 526
Query: 546 ANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSRVPYGFHGTFVDSKDL 605
S+ EDDGYI++FVHDE++W+SEL IVNA+ L+LEA++KLPSRVPYGFHGTFV+S D+
Sbjct: 527 LE-SDGEDDGYIMSFVHDEESWESELHIVNAVTLELEATVKLPSRVPYGFHGTFVNSADM 585
Query: 606 VNQA 609
+NQA
Sbjct: 586 LNQA 589
Score = 89 (36.4 bits), Expect = 4.4e-226, Sum P(2) = 4.4e-226
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 22 FSSSLVDKGFPTKSIALKK-KPNK-SLKVESALHSPSVLHFPKQPYPNPVITRPDST 76
F+ S +D P+ S++ KP + L S +P++L+FP P PNP+I D++
Sbjct: 18 FAPSDLDAPSPSSSVSFTNTKPRRRKLSANSVSDTPNLLNFPNYPSPNPIIPEKDTS 74
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 2154 (763.3 bits), Expect = 4.1e-223, P = 4.1e-223
Identities = 420/611 (68%), Positives = 478/611 (78%)
Query: 1 MAAST-TSPNSCSW-GKSQILNPFSSSLVDKGFPTKSIALKKKPNKSLKVESALHSPSVL 58
MA+ T T+ S W G + P SSS S+ + + + L V SALH+P L
Sbjct: 1 MASFTATAAVSGRWLGGNHTQPPLSSSQSSDLSYCSSLPMASRVTRKLNVSSALHTPPAL 60
Query: 59 HFPKQPYPNPVITRPDSTAKPDNKSNKSQGQTQQSQWNPLQRXXXXXXXXXXXXXVSRER 118
HFPKQ +P I KP K + ++ Q N QR VS E+
Sbjct: 61 HFPKQSSNSPAIV-----VKPKAKESNTK------QMNLFQRAAAAALDAAEGFLVSHEK 109
Query: 119 QHPLPKTADPRVQIGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHH 178
HPLPKTADP VQI GNFAPV E+PVR LPV G +P+ I GVY+RNGANPL EPV GHH
Sbjct: 110 LHPLPKTADPSVQIAGNFAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHH 169
Query: 179 FFDGDGMVHAVTIGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLF 238
FFDGDGMVHAV +GSASYACRFT+T R +QER+LGRPVFPKAIGELHGH GI RL+LF
Sbjct: 170 FFDGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLF 229
Query: 239 YARGLFGLVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQ 298
YAR G+VD GTGVANAGLVYFN R+LAMSEDDLPYQV+ITP+GDL+TVGR++F+ Q
Sbjct: 230 YARAAAGIVDPAHGTGVANAGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQ 289
Query: 299 LKSTMIAHPKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFA 358
L+STMIAHPKVDP S ELFALSYDVV KPYLKYFRFS DG KSPDVEI L PTMMHDFA
Sbjct: 290 LESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFA 349
Query: 359 ITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFC 418
ITENFVV+PDQQVVFKL EMI GGSPV+YDKNK +RFGIL K A+DS++I WI++PD FC
Sbjct: 350 ITENFVVVPDQQVVFKLPEMIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCFC 409
Query: 419 FHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSE 478
FHLWNAWEEPETDE+VVIGSCMTP DSIFNE DE+LKSVLSEIRLNLKTGESTRR I+S
Sbjct: 410 FHLWNAWEEPETDEVVVIGSCMTPPDSIFNESDENLKSVLSEIRLNLKTGESTRRPIISN 469
Query: 479 SDQ-VNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGG 537
DQ VNLEAGMVNRN LGRKT+FAYLA+AEPWPKVSGFAKVDL++GEVKK+ YGDN+YGG
Sbjct: 470 EDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDLTTGEVKKHLYGDNRYGG 529
Query: 538 EPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSRVPYGFHG 597
EP FLP + ED+GYIL FVHDEKTWKSELQIVNA++L++EA++KLPSRVPYGFHG
Sbjct: 530 EPLFLPGEGGE---EDEGYILCFVHDEKTWKSELQIVNAVSLEVEATVKLPSRVPYGFHG 586
Query: 598 TFVDSKDLVNQ 608
TF+ + DL Q
Sbjct: 587 TFIGADDLAKQ 597
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 2037 (722.1 bits), Expect = 1.0e-210, P = 1.0e-210
Identities = 405/609 (66%), Positives = 472/609 (77%)
Query: 4 STTSPNSCSWGKSQILNPFSSSLVDKGFPTKSIALKKKPNKSLKVESALHSPSVLHFPKQ 63
ST+S S S K Q L+ FSS+L +K + NK V S+L SP+
Sbjct: 70 STSS--SSSRPKLQSLS-FSSTLRNKKLVVPCY-VSSSVNKKSSVSSSLQSPTF------ 119
Query: 64 PYPNPVITRPDSTAKPDNK-SNKSQGQTQQS-QWNPLQRXXXXXXXXXXXXXVSRERQ-H 120
+P S K N +N T Q+ + NP+QR +S ER+ H
Sbjct: 120 --------KPPSWKKLCNDVTNLIPKTTNQNPKLNPVQRTAAMVLDAVENAMISHERRRH 171
Query: 121 PLPKTADPRVQIGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFF 180
P PKTADP VQI GNF PVPE+PV H LPVTG++PECI GVY+RNGANPL +PV+GHH F
Sbjct: 172 PHPKTADPAVQIAGNFFPVPEKPVVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLF 231
Query: 181 DGDGMVHAVTIGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYA 240
DGDGMVHAV NGS SYACRFTET RL+QERE GRPVFPKAIGELHGH GI +L+LF
Sbjct: 232 DGDGMVHAVRFDNGSVSYACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNT 291
Query: 241 RGLFGLVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK 300
RGLFGLVD G GVANAGLVYFN +LAMSEDDLPY V++T +GDLET GRY+F+ QLK
Sbjct: 292 RGLFGLVDPTGGLGVANAGLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDFDGQLK 351
Query: 301 STMIAHPKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAIT 360
STMIAHPK+DP ++ELFALSYDVV KPYLKYFRF++DG+KSPDVEI L PTM+HDFAIT
Sbjct: 352 STMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFAIT 411
Query: 361 ENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFH 420
ENFVVIPDQQVVF+L EMI GGSPV+YD+ KKSRFGIL KNAKD++ I WIE PD FCFH
Sbjct: 412 ENFVVIPDQQVVFRLPEMIRGGSPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFH 471
Query: 421 LWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESD 480
LWN+WEEPETDE+VVIGSCMTP DSIFNE DE+L+SVLSEIRLNLKTGESTRR ++SE
Sbjct: 472 LWNSWEEPETDEVVVIGSCMTPPDSIFNEHDETLQSVLSEIRLNLKTGESTRRPVISE-- 529
Query: 481 QVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPF 540
QVNLEAGMVNRN LGRKT++AYLA+ EPWPKVSGFAKVDLS+GE++KY YG+ KYGGEP
Sbjct: 530 QVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLSTGEIRKYIYGEGKYGGEPL 589
Query: 541 FLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSRVPYGFHGTFV 600
FLP + + E ED GYI+ FVHDE+ KSELQ++NA+N++LEA++ LPSRVPYGFHGTF+
Sbjct: 590 FLP--SGDGE-EDGGYIMVFVHDEEKVKSELQLINAVNMKLEATVTLPSRVPYGFHGTFI 646
Query: 601 DSKDLVNQA 609
+DL QA
Sbjct: 647 SKEDLSKQA 655
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
Identities = 372/514 (72%), Positives = 436/514 (84%)
Query: 96 NPLQRXXXXXXXXXXXXXVSRERQHPLPKTADPRVQIGGNFAPVPERPVRHGLPVTGSIP 155
N Q+ +S E+ PLPKTADPRVQI GN++PVPE VR L V G+IP
Sbjct: 70 NIFQKAAAIAIDAAERALISHEQDSPLPKTADPRVQIAGNYSPVPESSVRRNLTVEGTIP 129
Query: 156 ECINGVYLRNGANPLFEPVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQRLMQERELG 215
+CI+GVY+RNGANP+FEP AGHH FDGDGMVHAV I NGSASYACRFT+T+RL+QE+ LG
Sbjct: 130 DCIDGVYIRNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLG 189
Query: 216 RPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNRILAMSEDDL 275
RPVFPKAIGELHGH+GI RL+LFYARGL GL++++ G GVANAGLVYFNNR+LAMSEDDL
Sbjct: 190 RPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFNNRLLAMSEDDL 249
Query: 276 PYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKELFALSYDVVQKPYLKYFRFS 335
PYQ++IT +GDL+TVGRY+F+ QLKS MIAHPK+DPV+KEL ALSYDVV+KPYLKYFRFS
Sbjct: 250 PYQLKITQTGDLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFS 309
Query: 336 ADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRF 395
DG KSP++EI L PTM+HDFAITENFVVIPDQQVVFKL EMI+G SPV++D K SR
Sbjct: 310 PDGVKSPELEIPLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKSPVVFDGEKVSRL 369
Query: 396 GILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLK 455
GI+ K+A +++ IIW+ SP+TFCFHLWNAWE PET+EIVVIGSCM+PADSIFNE DESL+
Sbjct: 370 GIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERDESLR 429
Query: 456 SVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGF 515
SVLSEIR+NL+T ++TRR +L D VNLE GMVNRN LGRKT+FA+LAIA PWPKVSGF
Sbjct: 430 SVLSEIRINLRTRKTTRRSLLVNED-VNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGF 488
Query: 516 AKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSE-NEDDGYILAFVHDEKTWKSELQIV 574
AKVDL +GE+KKY YG KYGGEPFFLP ++ N E NEDDGYI VHDE+T SELQI+
Sbjct: 489 AKVDLCTGEMKKYIYGGEKYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTSELQII 548
Query: 575 NAMNLQLEASIKLPSRVPYGFHGTFVDSKDLVNQ 608
NA+NL+LEA+IKLPSRVPYGFHGTFVDS +LV+Q
Sbjct: 549 NAVNLKLEATIKLPSRVPYGFHGTFVDSNELVDQ 582
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 1566 (556.3 bits), Expect = 8.4e-161, P = 8.4e-161
Identities = 311/575 (54%), Positives = 402/575 (69%)
Query: 42 PNKSLKVESALHSPSVLHFPKQPYPNP--VITRPDSTAKPDNKSNKSQGQTQQSQWNPLQ 99
P K+ L P + ++ NP + T PD T+ P K + T + N LQ
Sbjct: 11 PTKTSPRSHLLPQPKNANISRRILINPFKIPTLPDLTS-PVPSPVKLK-PTYPNL-NLLQ 67
Query: 100 RXXXXXXXXXXXXXV-SRERQHPLPKTADPRVQIGGNFAPVPERPVRHGLPVTGSIPECI 158
+ V E+ PLPK DP VQ+ GNFAPV E PV++GL V G IP C+
Sbjct: 68 KLAATMLDKIESSIVIPMEQNRPLPKPTDPAVQLSGNFAPVNECPVQNGLEVVGQIPSCL 127
Query: 159 NGVYLRNGANPLFEPVAGHHFFDGDGMVHAVTIG-NGSASYACRFTETQRLMQERELGRP 217
GVY+RNGANP+F P+AGHH FDGDGM+HAV+IG + SY+CR+T+T RL+QE LGR
Sbjct: 128 KGVYIRNGANPMFPPLAGHHLFDGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRS 187
Query: 218 VFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNRILAMSEDDLPY 277
VFPK IGELHGH+G+ RL LF AR GLVD +G GVANAG+V+FN R+LAMSEDDLPY
Sbjct: 188 VFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGVVFFNGRLLAMSEDDLPY 247
Query: 278 QVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKELFALSYDVVQKPYLKYFRFSAD 337
QV+I GDLET+GR+ F+ Q+ S++IAHPKVD + +L LSY+V++KP+L+Y +F+
Sbjct: 248 QVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTC 307
Query: 338 GDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSPVIYDKNKKSRFGI 397
G K+ DVEI LP PTM+HDFAITENFVVIPDQQ+VFKL EMI GGSPVIY K K +RFG+
Sbjct: 308 GKKTRDVEITLPEPTMIHDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKEKMARFGV 367
Query: 398 LAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDE----IVVIGSCMTPADSIFNECDES 453
L+K +DI W++ PD FCFHLWNAWEE T+E IVVIGSCM+P D+IF+E E
Sbjct: 368 LSKQDLTGSDINWVDVPDCFCFHLWNAWEE-RTEEGDPVIVVIGSCMSPPDTIFSESGEP 426
Query: 454 LKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVS 513
+ LSEIRLN++T ES R+ I++ VNLEAG +NR+ +GRK+QF Y+AIA+PWPK S
Sbjct: 427 TRVELSEIRLNMRTKESNRKVIVTG---VNLEAGHINRSYVGRKSQFVYIAIADPWPKCS 483
Query: 514 GFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQI 573
G AKVD+ +G V ++ YG +++GGEP F+P ED GY++ FV DE+ +SE +
Sbjct: 484 GIAKVDIQNGTVSEFNYGPSRFGGEPCFVPEGEGE---EDKGYVMGFVRDEEKDESEFVV 540
Query: 574 VNAMNLQLEASIKLPSRVPYGFHGTFVDSKDLVNQ 608
V+A +++ A+++LP RVPYGFHGTFV L Q
Sbjct: 541 VDATDMKQVAAVRLPERVPYGFHGTFVSENQLKEQ 575
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 214/601 (35%), Positives = 324/601 (53%)
Query: 23 SSSLVDKGFPTKSIALKKKPNKS--LKVESALHSPSVLHFPKQPYPNPVITRPDSTAKPD 80
SSS + F L+++ + L++ SA+ + P NP D KP
Sbjct: 6 SSSFLSSTFSLHHSLLRRRSSSPTLLRINSAVVEE------RSPITNPSDNN-DRRNKPK 58
Query: 81 NKSNKSQGQTQQS--QWNPLQRXXXXXXXXXXXXXVSRERQHPLPKTADPRVQIGGNFAP 138
N++ S + P + ++ P + DP+ + NFAP
Sbjct: 59 TLHNRTNHTLVSSPPKLRP-EMTLATALFTTVEDVINTFIDPPSRPSVDPKHVLSDNFAP 117
Query: 139 V-PERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P + G++P +NG Y+RNG NP F P +H FDGDGM+HA+ I NG A+
Sbjct: 118 VLDELPPTDCEIIHGTLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKAT 177
Query: 198 YACRFTETQRLMQERELGRPVFPKAIGELHGHNG-IGRLLLFYARGLFGLVDHKQGTGVA 256
R+ +T + E++ G PV P +G + R L AR L G + G G+A
Sbjct: 178 LCSRYVKTYKYNVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLA 237
Query: 257 NAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKEL 316
N L +F+NR+ A+ E DLPY VR+T SGD+ET+GRY+F+ +L +M AHPK DP++ E
Sbjct: 238 NTSLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGET 297
Query: 317 FALSYDVVQKPYLKYFRFSADGDKSPDVEIH-LPVPTMMHDFAITENFVVIPDQQVVFKL 375
FA Y V P+L YFRF + G K DV I + P+ +HDFAIT+ + + Q+ ++
Sbjct: 298 FAFRYGPVP-PFLTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRM 356
Query: 376 QEM---ITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDE 432
+ + GGSPV D K R G++ K A D +++ W E P H NAW+E + +
Sbjct: 357 NMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNS 416
Query: 433 IVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGMVNRN 492
+V+I + + D + +++ +++++L TG RR +S NL+ ++N
Sbjct: 417 VVLIAPNIMSIEHTLERMD-LVHALVEKVKIDLVTG-IVRRHPISAR---NLDFAVINPA 471
Query: 493 SLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGE-----VKKYFYGDNKYGGEPFFLPRDAN 547
LGR +++ Y AI +P PK+SG K+D+S G+ V + YG YGGEPFF+ RD
Sbjct: 472 FLGRCSRYVYAAIGDPMPKISGVVKLDVSKGDRDDCTVARRMYGSGCYGGEPFFVARDPG 531
Query: 548 NSE-NEDDGYILAFVHDEKTWKSELQIVNAMNLQLE--ASIKLPSRVPYGFHGTFVDSKD 604
N E EDDGY++ +VHDE T +S+ +++A + +LE A+++LP RVPYGFHG FV D
Sbjct: 532 NPEAEEDDGYVVTYVHDEVTGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESD 591
Query: 605 L 605
L
Sbjct: 592 L 592
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 194/504 (38%), Positives = 287/504 (56%)
Query: 128 PRVQIGGNFAPV-PERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFFDGDGMV 186
P + GNFAP+ E P LPV G +PEC+NG ++R G NP F+ VAG+H+FDGDGM+
Sbjct: 44 PLHYLSGNFAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMI 103
Query: 187 HAVTIGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGL 246
H V I +G A+Y R+ +T RL QE G F K IG+L G G+ + + R +
Sbjct: 104 HGVRIKDGKATYVSRYVKTSRLKQEEFFGAAKFMK-IGDLKGFFGLLMVNVQQLRTKLKI 162
Query: 247 VDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAH 306
+D+ G G AN LVY + ++LA+ E D PY +++ GDL+T+G +++ +L + AH
Sbjct: 163 LDNTYGNGTANTALVYHHGKLLALQEADKPYVIKVLEDGDLQTLGIIDYDKRLTHSFTAH 222
Query: 307 PKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVI 366
PKVDPV+ E+F Y PYL Y S DG V I + P MMHDFAITE + +
Sbjct: 223 PKVDPVTGEMFTFGYSHTP-PYLTYRVISKDGIMHDPVPITISEPIMMHDFAITETYAIF 281
Query: 367 PDQQVVFKLQEMITGGSPVI-YDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAW 425
D + F+ +EM+ + +D KK+RFG+L + AKD I W E P+ F FH NAW
Sbjct: 282 MDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAW 341
Query: 426 EEPETDEIVVIGSCM--TP-ADSIFNECDESLKSV---LSEIRLNLKTGESTRRQILSES 479
EE DE+V+I +C P D + + E L++ L E+R N+KTG ++++++ + +
Sbjct: 342 EEE--DEVVLI-TCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASA 398
Query: 480 DQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSS------------GEVKK 527
++ +N G+K ++ Y I + KV+G K DL + G +K
Sbjct: 399 ----VDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKG 454
Query: 528 -YFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLE--AS 584
Y G+ +YG E ++PR+ + EDDGY++ FVHDE T KS + +++A + E A
Sbjct: 455 IYDLGEGRYGSEAIYVPRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEPVAV 511
Query: 585 IKLPSRVPYGFHGTFVDSKDLVNQ 608
++LP RVPYGFH FV + L Q
Sbjct: 512 VELPHRVPYGFHALFVTEEQLQEQ 535
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 248 (92.4 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 69/240 (28%), Positives = 115/240 (47%)
Query: 201 RFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGL 260
R+ +T++ ++ERE R + G+G+ Y V+ K + AN +
Sbjct: 62 RYVQTEKFVREREAQRALLA----------GLGK----YRNRFTDAVELKVRS-TANTNV 106
Query: 261 VYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKS-TMIAHPKVDPVSKELFAL 319
V+FN ++LA+ ED PY + P L+T G Y+F QL S T AHPK DP + E+
Sbjct: 107 VFFNGQLLALKEDSPPYA--LDPV-TLDTKGLYDFEGQLPSLTFTAHPKFDPATGEMVCF 163
Query: 320 SYDVVQK--PYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQE 377
Y+ P + Y+ S G + V + PV M+HDFA+T+N+V+ P V L+
Sbjct: 164 GYEARGDGTPDVCYYSVSPTGKFTEVVWLVAPVVAMIHDFAVTDNWVIFPIIPQVCDLER 223
Query: 378 MITGGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIG 437
M GG + G++ + + ++ W ++F H NA+E + ++ +G
Sbjct: 224 MKQGGEHWQWSPETPFYLGVMPRRGAKAEEVKWFRYMNSFPGHTANAYENEQGHLVIDLG 283
Score = 165 (63.1 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 36/97 (37%), Positives = 58/97 (59%)
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWK 568
+P + A +D ++G+V+ YF G EP F+PR NS E DG++LA V++ T
Sbjct: 376 FPLYNSLAHLDHTTGQVEVYFPGRTHLVQEPVFIPR--KNSSTEGDGHVLALVNNYDTMA 433
Query: 569 SELQIVNAMNL-QLEASIKLPSRVPYGFHGTFVDSKD 604
SEL +++ + + +A I LP R+ G HG++VD+ D
Sbjct: 434 SELHLLDTRDFARAQAKILLPVRLRQGLHGSWVDASD 470
Score = 56 (24.8 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 129 RVQIGGNFAPVP-ERPVRHGLPVTGSIPECINGVYLRNGANPLFEP 173
R Q G P E V H L V G IP+ I+GV+ R +P P
Sbjct: 11 RPQFSGFMKPCRFEGDVSH-LEVYGEIPKDIDGVFYRVMPDPQLPP 55
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 159 (61.0 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 41/131 (31%), Positives = 65/131 (49%)
Query: 254 GVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVS 313
G N ++ R LA+ E + V + +L+TVG +F+ L AHP+ DP +
Sbjct: 113 GGPNTNVLTHAGRTLALVEAGV---VNYELTDELDTVGPCDFDGTLHGGYTAHPQRDPHT 169
Query: 314 KELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVF 373
EL A+SY + ++Y DG V+I + MMH F++T+N+VVI D V F
Sbjct: 170 GELHAVSYSFARGHRVQYSVIGTDGHARRTVDIEVAGSPMMHSFSLTDNYVVIYDLPVTF 229
Query: 374 KLQEMITGGSP 384
+++ P
Sbjct: 230 DPMQVVPASVP 240
Score = 157 (60.3 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 38/87 (43%), Positives = 48/87 (55%)
Query: 134 GNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFE-PVAGHHFFDGDGMVHAVTIG 192
G APV LPVTG IPE ++G YLRNG NP+ E A +H+F GD MVH V +
Sbjct: 16 GFLAPVSTEVTATDLPVTGRIPEHLDGRYLRNGPNPVAEVDPATYHWFTGDAMVHGVALR 75
Query: 193 NGSAS-YACRFTETQRLMQERELGRPV 218
+G A Y R+ T + LG P+
Sbjct: 76 DGKARWYRNRWVRTPAVCAA--LGEPI 100
Score = 131 (51.2 bits), Expect = 4.5e-29, Sum P(3) = 4.5e-29
Identities = 63/251 (25%), Positives = 105/251 (41%)
Query: 364 VVIPDQQVVFKLQEMITGGS---PVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFH 420
V IPD + L + G S P ++ + +R G++ + + D+ W + + +H
Sbjct: 258 VRIPDP--IAALGNRMQGHSDRLPYAWNPSYPARVGVMPREG-GNEDVRWFDIEPCYVYH 314
Query: 421 LWNAWEEPETD-EIVVIG----SCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQI 475
NA+ E E++V+ S M D D + L +NL TG T
Sbjct: 315 PLNAYSECRNGAEVLVLDVVRYSRMFDRDRRGPGGDS--RPSLDRWTINLATGAVTAE-- 370
Query: 476 LSESDQVNLEAGMVNRNSLGRKTQFAYLAIAEPWPKV-SGFA------KVDLSSGEVKKY 528
D+ E +N +G +FAY E V +G A K D +G
Sbjct: 371 -CRDDRAQ-EFPRINETLVGGPHRFAYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVA 428
Query: 529 FYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLP 588
+ GE F+P + +E DDG ++ + + +L +++A L+ A++ LP
Sbjct: 429 SLDPDLLIGEMVFVPNPSARAE--DDGILMGYGWHRGRDEGQLLLLDAQTLESIATVHLP 486
Query: 589 SRVPYGFHGTF 599
RVP GFHG +
Sbjct: 487 QRVPMGFHGNW 497
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 249 (92.7 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 78/285 (27%), Positives = 129/285 (45%)
Query: 148 LPVTGSIPECINGVYLRNGANPLFEP-VAGHHFFDGDGMVHAVTIGNGSASYACRFTETQ 206
+ + G +P +NG + R + F P FF+GDGMV +G + R+ +T
Sbjct: 26 IEIEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTD 85
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNR 266
+ ER+ G+ +F G R L + G++ G AN ++ +
Sbjct: 86 KWKVERKAGKSLF-----------GAYRNPLTDDASVQGMI-----RGTANTNVMVHAGK 129
Query: 267 ILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKS-TMIAHPKVDPVSKELFALSYDV-- 323
+ AM ED P + + P LET G NF+ +L+S T AHPK+DPV+ L A +Y
Sbjct: 130 LYAMKEDS-PCLI-MDPL-TLETEGYTNFDGKLQSQTFCAHPKIDPVTGNLCAFAYGAKG 186
Query: 324 VQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGS 383
+ + Y S G ++ P MMHDF +TE++ V ++ + +
Sbjct: 187 LMTLDMAYIEISPTGKLLKEIPFQNPYYCMMHDFGVTEDYAVFAVMPLLSSW-DRLEQRL 245
Query: 384 PVI-YDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEE 427
P +D GIL +N D+ D+ W ++ + F H+ NA+ +
Sbjct: 246 PFFGFDTTLPCYLGILPRNG-DARDLRWFKTGNCFVGHVMNAFND 289
Score = 120 (47.3 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 518 VDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAM 577
+DL++G+ ++ G EP F+PR + E DGY++A V D S+L I +A
Sbjct: 394 IDLATGKSSSWWAGPRCAIQEPCFIPRSPDAPEG--DGYVIALVDDHVANYSDLAIFDAQ 451
Query: 578 NLQLE--ASIKLPSRVPYGFHGTFVDSKDL 605
++ A KLP R+ G HG + D+ L
Sbjct: 452 HVDQGPIARAKLPVRIRQGLHGNWADASRL 481
>ASPGD|ASPL0000067272 [details] [associations]
symbol:AN7062 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011047 SUPFAM:SSF50998 EMBL:BN001304
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 EMBL:AACD01000118 RefSeq:XP_664666.1
ProteinModelPortal:Q5AXB8 EnsemblFungi:CADANIAT00000409
GeneID:2869943 KEGG:ani:AN7062.2 OMA:FQEPIFV OrthoDB:EOG4GTPN5
Uniprot:Q5AXB8
Length = 555
Score = 250 (93.1 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 75/289 (25%), Positives = 128/289 (44%)
Query: 148 LPVTGSIPECINGVYLRNGANPLFEPVAGHHF-FDGDGMVHAVTIGNGSASYACRFTETQ 206
L +TG IP I+G + R + F P+ F+GDG V A+ I N +A + R+ T
Sbjct: 51 LQITGQIPADIDGTFFRVQPDHRFPPIYESDIHFNGDGNVTAIRITNSTAHFKQRYVRTD 110
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNR 266
R E + GR +F K + + +G+ AN + ++
Sbjct: 111 RFQAEGQAGRALFGKYRNPYTDNEAV--------KGVIRTA--------ANTNIFFWRGM 154
Query: 267 ILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKS-TMIAHPKVDPVSKELFALSYDVVQ 325
+LA ED PY + P LET+GRY+F Q+ S T AHPK DP + E+ Y+
Sbjct: 155 LLATKEDGPPYAM--DPVS-LETIGRYDFEGQVLSPTFTAHPKFDPKTGEMVCYGYEAGG 211
Query: 326 KPY-----LKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMIT 380
+ + A+G K+ + P ++HD I++ +VV+P + + +
Sbjct: 212 NGNDGSCDIVVYTIDANGVKTEESWYKAPFCGIIHDCGISDKWVVLPMTPLKCDPERLKK 271
Query: 381 GGSPVIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEPE 429
G + +D + +G++ + DI W S + F H + ++ P+
Sbjct: 272 GENHWAWDPEEDQWYGVVPRRGGKPGDIRWYRSKNAFQGHTVSCYDTPD 320
Score = 99 (39.9 bits), Expect = 7.6e-24, Sum P(2) = 7.6e-24
Identities = 28/86 (32%), Positives = 48/86 (55%)
Query: 523 GEVKKYFY-GDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQL 581
G V++ F+ G EP F+PR A ++E E DGYI+A ++ ++++ I +A +
Sbjct: 436 GAVRETFWAGPCATFQEPAFIPR-AGSTE-EGDGYIVALLNHLDVLRNDVCIFDARKIAQ 493
Query: 582 E--ASIKLPSRVPYGFHGTFVDSKDL 605
A I LP ++ G HG FV+ ++
Sbjct: 494 GPIAVIHLPFKLRLGLHGNFVEESEI 519
>UNIPROTKB|Q2KEQ1 [details] [associations]
symbol:MGCH7_ch7g985 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CM000230 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 Uniprot:Q2KEQ1
Length = 489
Score = 185 (70.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 64/197 (32%), Positives = 91/197 (46%)
Query: 256 ANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKS-TMIAHPKVDPVSK 314
AN ++YFN R+LA ED PY + P LET+ F+ QL S T AHPKVD +
Sbjct: 111 ANTNIIYFNGRLLACKEDSPPYC--LDPE-TLETMWLETFDGQLPSLTFTAHPKVDAHTG 167
Query: 315 ELFALSYDVVQK--PYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVV 372
EL Y+ P + YF F V + PV M+HDFA+TEN+ D
Sbjct: 168 ELICFGYEARGDGTPDVCYFTFDKKAAILETVWLVAPVVAMIHDFAVTENWTC--D---- 221
Query: 373 FKLQEMITGGSPVIYDKNKKSRFGILAKNAKDSNDII---------------WIESPDTF 417
L+ M GG ++ + G+L + +DI W ++P++F
Sbjct: 222 --LERMEKGGEHWQWNPDIPFYLGVLPRRGAKGSDIKPADQLNPRRPFPPRQWFKAPNSF 279
Query: 418 CFHLWNAWEEPETDEIV 434
H NA+E+ E+ IV
Sbjct: 280 PGHTVNAYED-ESGNIV 295
Score = 131 (51.2 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 510 PKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKS 569
P + +D ++G + +YF G EP +PR + E DG+++ V++ S
Sbjct: 393 PMYNCIGHLDYATGRLDRYFPGSTHLVQEPVVVPRSRDVPEG--DGWVVVLVNNYANMSS 450
Query: 570 ELQIVNAMNL-QLEASIKLPSRVPYGFHGTFVDSKDL 605
EL IV+ +L + +A + LP R+ G HG +VD+ D+
Sbjct: 451 ELHIVDTRDLSKAQAIVYLPVRLRAGLHGNWVDAGDI 487
Score = 74 (31.1 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 22/81 (27%), Positives = 38/81 (46%)
Query: 131 QIGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGHHFFDGDGMVHAVT 190
Q G P + L V GSIP I+ + R +P P +F+GDG + A
Sbjct: 19 QFSGFMKPCRFQGEASNLEVQGSIPPEIDDTFYRVMPDPHL-P----QWFNGDGNISAFR 73
Query: 191 IGNGSASYACRFTETQRLMQE 211
I +G + R+ +T++ +++
Sbjct: 74 IKDGRCDFKQRYVQTEKFVRK 94
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 204 (76.9 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 83/314 (26%), Positives = 140/314 (44%)
Query: 148 LPVTGSIPECINGVYLRNGANPLFEPVAGH---HFFDGDGMVHAVTIGNGSASYACRFTE 204
L V G IP +NG YLRNG P + H H FDG + + G A R E
Sbjct: 95 LTVQGKIPTWLNGTYLRNG--PGLWNIGDHDFRHLFDGYSTLVKLQFDGGRIFAAHRLLE 152
Query: 205 TQRLMQERELGRPVF------PKA-IGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVAN 257
+ ++ R + PK+ I + +GIG ++ ++ L D+ TGV
Sbjct: 153 SDAYKAAKKHNRLCYREFSETPKSVIINKNPFSGIGEIVRLFSGE--SLTDNAN-TGVIK 209
Query: 258 AGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI--AHPKVDPVSKE 315
G + R++ ++E + + LET+G++ ++ L MI AHP V E
Sbjct: 210 LG----DGRVMCLTETQKG-SILVDHE-TLETIGKFEYDDVLSDHMIQSAHPIV--TETE 261
Query: 316 LFALSYDVVQKPYLKYFRFSADGDKSPDV-EIHLPV----PTMMHDFAITENFVVIPDQQ 370
++ L D+V KP + R A +K V + P +H FA+TEN+VVIP+
Sbjct: 262 MWTLIPDLV-KPGYRVVRMEAGSNKREVVGRVRCRSGSWGPGWVHSFAVTENYVVIPEMP 320
Query: 371 VVFKLQEMITGGSPVIYDKNKKSRFG-ILAKNAKDSNDIIW-IESPDTFCFHLWNAWEEP 428
+ + ++ ++ +Y + G + +K + +++ +E P FH NA+EE
Sbjct: 321 LRYSVKNLLRAEPTPLYKFEWCPQDGAFIHVMSKLTGEVVASVEVPAYVTFHFINAYEED 380
Query: 429 ETDE---IVVIGSC 439
+ + V+I C
Sbjct: 381 KNGDGKATVIIADC 394
Score = 142 (55.0 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 54/213 (25%), Positives = 101/213 (47%)
Query: 411 IESPDTFCFHLWNAWEEPETDE----IVVIGSCMTPADS-IFNECD-ESLKS-----VLS 459
+E P FH NA+EE + + +++ C AD+ I + ++L+S VL
Sbjct: 363 VEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRLDTLRSSHGHDVLP 422
Query: 460 EIRLN-----LKTGESTRRQILSESDQVNLEAGMVNRNSL--GRKTQFAYLAIAE-PWPK 511
+ R+ L + + + E+++ M + N L G+K ++ Y A+ P
Sbjct: 423 DARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKYRYVYACGAQRPCNF 482
Query: 512 VSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSEL 571
+ +KVD+ +VK + + EPFF+PR + +EDDG +++ V +E +
Sbjct: 483 PNALSKVDIVEKKVKNW-HEHGMIPSEPFFVPRPG--ATHEDDGVVISIVSEENGGSFAI 539
Query: 572 QIVNAMNLQLEASIKLPSRVPYGFHGTFVDSKD 604
+++ + + A K P +PYG HG ++ KD
Sbjct: 540 -LLDGSSFEEIARAKFPYGLPYGLHGCWIP-KD 570
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 135 NFAPVPERPVRHGL 148
N+ +PE P+R+ +
Sbjct: 312 NYVVIPEMPLRYSV 325
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 247 (92.0 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 117/473 (24%), Positives = 190/473 (40%)
Query: 150 VTGSIPECINGVYLRNGANPLFEP--VAGHHFFDGDGMVHAVTIGNGSASYACRFTETQR 207
V G+IP + G RNG LF+ + DGDGMV A G+ YA RF T++
Sbjct: 60 VEGTIPAGLRGTLYRNGP-ALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRTRK 118
Query: 208 LMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYF--NN 265
++E GR + P + G G++ V + ++ AG+ F
Sbjct: 119 FVEEEAAGRFLHPTWSTQAPG-------------GIWTNVWPTERL-LSQAGITVFPWRG 164
Query: 266 RILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKVDPVSKELFALSYDVV 324
R+ A E PY+ + P L TVG F +T AH K DPV+ E
Sbjct: 165 RLYAFDESSFPYE--LDPD-TLATVGETTFGLPRDLTTYSAHGKFDPVTGEWLHFGIRYG 221
Query: 325 QKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSP 384
+ ++ F+ADG + LP MHD+ +TE VV V + G
Sbjct: 222 PRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRS 281
Query: 385 VIYDKNKKSRFGILAKNAKDSNDII--WIESPDTFCFHLWNAWEEPETDEIVVIGSCMTP 442
+ + G + A+ + +E+ + +H +NAWEE +G P
Sbjct: 282 MAESLRWRPERGTILMVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGY-RNP 340
Query: 443 ADSIFNECDESLKSVL----------SEI-RLNLKTGESTR-RQILSESDQVNLEAGMVN 490
D ++ D + +V+ E+ R + T R++L + + E ++
Sbjct: 341 -DHFISD-DPVITAVMLGRRGTYSYPGEVMRYRIDPARGTAAREVLHQG---SCEWPRID 395
Query: 491 RNSLGRKTQFAYLAIAEP----WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDA 546
R + Y+ P W V G +D +G +Y +G Y EP F PR
Sbjct: 396 ERLRCRPHRTGYMLRCLPGEFFWSIVMG---LDPVTGRTDEYSFGRGVYCTEPVFAPRPD 452
Query: 547 NNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLE--ASIKLPSRVPYGFHG 597
+ G++L ++D +T S L I++A + A ++L VP+ +HG
Sbjct: 453 TLAGGP--GWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHG 503
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 247 (92.0 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 117/473 (24%), Positives = 190/473 (40%)
Query: 150 VTGSIPECINGVYLRNGANPLFEP--VAGHHFFDGDGMVHAVTIGNGSASYACRFTETQR 207
V G+IP + G RNG LF+ + DGDGMV A G+ YA RF T++
Sbjct: 60 VEGTIPAGLRGTLYRNGP-ALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRTRK 118
Query: 208 LMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYF--NN 265
++E GR + P + G G++ V + ++ AG+ F
Sbjct: 119 FVEEEAAGRFLHPTWSTQAPG-------------GIWTNVWPTERL-LSQAGITVFPWRG 164
Query: 266 RILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKVDPVSKELFALSYDVV 324
R+ A E PY+ + P L TVG F +T AH K DPV+ E
Sbjct: 165 RLYAFDESSFPYE--LDPD-TLATVGETTFGLPRDLTTYSAHGKFDPVTGEWLHFGIRYG 221
Query: 325 QKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGSP 384
+ ++ F+ADG + LP MHD+ +TE VV V + G
Sbjct: 222 PRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRS 281
Query: 385 VIYDKNKKSRFGILAKNAKDSNDII--WIESPDTFCFHLWNAWEEPETDEIVVIGSCMTP 442
+ + G + A+ + +E+ + +H +NAWEE +G P
Sbjct: 282 MAESLRWRPERGTILMVAERDGEAPPRLVETEACYLWHTFNAWEERGKITADFVGY-RNP 340
Query: 443 ADSIFNECDESLKSVL----------SEI-RLNLKTGESTR-RQILSESDQVNLEAGMVN 490
D ++ D + +V+ E+ R + T R++L + + E ++
Sbjct: 341 -DHFISD-DPVITAVMLGRRGTYSYPGEVMRYRIDPARGTAAREVLHQG---SCEWPRID 395
Query: 491 RNSLGRKTQFAYLAIAEP----WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDA 546
R + Y+ P W V G +D +G +Y +G Y EP F PR
Sbjct: 396 ERLRCRPHRTGYMLRCLPGEFFWSIVMG---LDPVTGRTDEYSFGRGVYCTEPVFAPRPD 452
Query: 547 NNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLE--ASIKLPSRVPYGFHG 597
+ G++L ++D +T S L I++A + A ++L VP+ +HG
Sbjct: 453 TLAGGP--GWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHG 503
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 97/369 (26%), Positives = 170/369 (46%)
Query: 253 TGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDP 311
T AN + ++ +A++E +P + P LE +G N+ +LK + AHP D
Sbjct: 41 TDNANVNVSMIADKFVALTETPMP--IVFDPQ-TLERMGVINYEDKLKGNLTTAHPHYDF 97
Query: 312 VSKELFALSYDVV--QKPYLKYFRFSADGDKSPDVEIHLPV--PTMMHDFAITENFVVIP 367
+KE ++Y V K + +R S K+ ++ +PV P MH F +T+N+V++
Sbjct: 98 ETKE--GINYLTVFSAKSTSQIYRVSHHS-KTRELLGSIPVKEPGYMHSFGMTQNYVILA 154
Query: 368 DQQVVFKLQEMITGGSPVI----YDKNKKSRFGIL-AKNAKDSNDIIWIESPDTFCFHLW 422
+ ++ G+P I + NK + F +L K K N ++ F FH
Sbjct: 155 EYPFFVNPLNLLLNGNPFIENFNWKPNKGTHFYLLDRKTGKFQN----YKTESFFAFHHV 210
Query: 423 NAWEEPETDEIVVIGSCMTPA-DSIFNEC--DESLKSVLS--EIR---LNLKTGESTRRQ 474
NA+EE + + +I T S++ + E+ K+++S E+R +NL S
Sbjct: 211 NAFEENDKVIVDIIAYPNTDIIQSLYLDVLHGETNKNIVSAGELRRYEINL-LDSSVNYV 269
Query: 475 ILSESDQVNLEAGMVNRNSLGRKTQFAYLAIA----EPWPKVSGFAKVDLSSGEVKKYFY 530
+LSE +E +N K + +P ++ K+D+ + K +
Sbjct: 270 VLSEEP---IELPRINYFLSNTKNYLFVYGVGSDKNDPNNFLNRLLKIDVQQ-KATKIWK 325
Query: 531 GDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSR 590
Y GEP F+ N++ EDDG IL+ V + + S L I++A++ + A +P
Sbjct: 326 ETMCYPGEPVFV--SLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKEIARASVPHH 383
Query: 591 VPYGFHGTF 599
+P+GFHG F
Sbjct: 384 IPFGFHGQF 392
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 97/369 (26%), Positives = 170/369 (46%)
Query: 253 TGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDP 311
T AN + ++ +A++E +P + P LE +G N+ +LK + AHP D
Sbjct: 41 TDNANVNVSMIADKFVALTETPMP--IVFDPQ-TLERMGVINYEDKLKGNLTTAHPHYDF 97
Query: 312 VSKELFALSYDVV--QKPYLKYFRFSADGDKSPDVEIHLPV--PTMMHDFAITENFVVIP 367
+KE ++Y V K + +R S K+ ++ +PV P MH F +T+N+V++
Sbjct: 98 ETKE--GINYLTVFSAKSTSQIYRVSHHS-KTRELLGSIPVKEPGYMHSFGMTQNYVILA 154
Query: 368 DQQVVFKLQEMITGGSPVI----YDKNKKSRFGIL-AKNAKDSNDIIWIESPDTFCFHLW 422
+ ++ G+P I + NK + F +L K K N ++ F FH
Sbjct: 155 EYPFFVNPLNLLLNGNPFIENFNWKPNKGTHFYLLDRKTGKFQN----YKTESFFAFHHV 210
Query: 423 NAWEEPETDEIVVIGSCMTPA-DSIFNEC--DESLKSVLS--EIR---LNLKTGESTRRQ 474
NA+EE + + +I T S++ + E+ K+++S E+R +NL S
Sbjct: 211 NAFEENDKVIVDIIAYPNTDIIQSLYLDVLHGETNKNIVSAGELRRYEINL-LDSSVNYV 269
Query: 475 ILSESDQVNLEAGMVNRNSLGRKTQFAYLAIA----EPWPKVSGFAKVDLSSGEVKKYFY 530
+LSE +E +N K + +P ++ K+D+ + K +
Sbjct: 270 VLSEEP---IELPRINYFLSNTKNYLFVYGVGSDKNDPNNFLNRLLKIDVQQ-KATKIWK 325
Query: 531 GDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLEASIKLPSR 590
Y GEP F+ N++ EDDG IL+ V + + S L I++A++ + A +P
Sbjct: 326 ETMCYPGEPVFV--SLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKEIARASVPHH 383
Query: 591 VPYGFHGTF 599
+P+GFHG F
Sbjct: 384 IPFGFHGQF 392
>UNIPROTKB|Q52008 [details] [associations]
symbol:lsdB "Lignostilbene-alpha,beta-dioxygenase isozyme
III" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron
ion binding" evidence=ISS] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 GO:GO:0050054 EMBL:S80637 PIR:JC4324
Uniprot:Q52008
Length = 490
Score = 151 (58.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 65/286 (22%), Positives = 112/286 (39%)
Query: 148 LPVTGSIPECINGVYLRNGANPLFEP-VAGHHFFDGDGMVHAVTIGNGSASYACRFTETQ 206
L V G IP ++G + R + F P FF+GDGMV +G + R+ +T
Sbjct: 26 LEVEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTD 85
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNR 266
+ ER+ G+ +F G R L + G++ +GT AN ++ +
Sbjct: 86 KWKVERKAGKSLF-----------GAYRNPLTDDASVQGMI---RGT--ANTNVMVHAGK 129
Query: 267 ILAMSEDD---LPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKELFALSYDV 323
+ AM ED + + + G G+ N + P F +
Sbjct: 130 LYAMKEDSPCLIMDPLTLETEGYTNFDGKLK-NQTFSAHAKIDPVTGNFCN--FGYAATG 186
Query: 324 VQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENFVVIPDQQVVFKLQEMITGGS 383
+ YF G+ + E +P MMHD+ +TE++ + + G
Sbjct: 187 LLTTDCSYFEIDPAGNLLFETEFQVPYYCMMHDYGLTEHYAIFHIVPCSPNWDRLKAGLP 246
Query: 384 PVIYDKNKKSRFGILAKNAKDSN-DIIWIESPDT-FCFHLWNAWEE 427
+D G++ + +N D+ W ++P T F H+ NA+EE
Sbjct: 247 HFGFDTTLPVWLGVVPRGPGVTNKDVRWFKAPKTIFASHVMNAFEE 292
Score = 122 (48.0 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 511 KVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE 570
K++ D ++G+ ++ G EP F+PR A+++E DGYI+A V + T S+
Sbjct: 392 KMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPRMADSAEG--DGYIIALVDNLITNYSD 449
Query: 571 LQIVNAMNLQLEASI---KLPSRVPYGFHGTFVDSKDL 605
L +++A+NL+ + I KLP R+ G HG + D+ L
Sbjct: 450 LVVLDALNLK-DGPIGRAKLPIRLRSGLHGNWADASKL 486
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 143 (55.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 66/273 (24%), Positives = 112/273 (41%)
Query: 133 GGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFE--PVAGHHFFDGDGMVHAVT 190
G N PE P++ V GSIPE + G +RNG +F +H+FDG ++H+
Sbjct: 6 GKNKEEHPE-PIK--TEVKGSIPEWVQGTLIRNGPG-MFSVGETTYNHWFDGMALLHSFA 61
Query: 191 IGNGSASYACRF----TETQRLMQER----ELGRPVFPKAIGELHGHNGIGRLLLFYARG 242
I G +Y R+ T + R E+G +P N +++ F +
Sbjct: 62 INKGEVTYRSRYLRGDTYNSNMQANRIVVSEMGTMAYPDPC-----KNIFSKVITFLSHT 116
Query: 243 LFGLVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKST 302
+ D+ N ++ + N A SE + Y +I P LET + ++ L +
Sbjct: 117 IPDFTDN-----CGN-NIIKYGNDFHATSETN--YIRKIDPV-TLETQEKIDYLKYLPVS 167
Query: 303 MIA-HPKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPD-------VEI--HLP--- 349
++A H D +++ + +K KY F G PD E LP
Sbjct: 168 IVASHTHYDKEGNS-YSMGTCIAEKGKTKYMLFKVPGGSRPDGSPPLKSAEAVCTLPCRS 226
Query: 350 --VPTMMHDFAITENFVVIPDQQVVFKLQEMIT 380
P+ H F +T+N+ + +Q + + +M T
Sbjct: 227 LLTPSYYHSFGMTDNYFIFIEQPLKLDILKMAT 259
Score = 113 (44.8 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/118 (24%), Positives = 58/118 (49%)
Query: 484 LEAGMVNRNSLGRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLP 543
+E +N N G+K +++Y+ + P + K D + + ++ GD+ + EP F+P
Sbjct: 398 VELPRINYNFNGKKYRYSYMCCVDESPVATRIVKFDADTKQQIEW-KGDDGFASEPVFIP 456
Query: 544 RDANNSENEDDGYILAFVHDEKTWKSE-LQIVNAMNLQLEASIKLPSRVPYGFHGTFV 600
R + +EDDG +L + + K + L +++A + + A L + HG F+
Sbjct: 457 RPG--AVDEDDGVVLTVIINNKPLQGGFLLVLDAKSFKEIARACLDVEIHMDMHGYFI 512
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 145 (56.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 79/339 (23%), Positives = 143/339 (42%)
Query: 150 VTGSIPECINGVYLRNGANPLFE--PVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQR 207
+TG++P I G +LRNG FE + +H+FDG ++H I +G +Y RF +
Sbjct: 53 ITGNVPSWIKGNFLRNGPGK-FEIGRSSFNHWFDGMALLHQFHIEDGKVTYMSRFLNSDS 111
Query: 208 LMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFNNRI 267
+ E R + G + + F+ R L K AN V +
Sbjct: 112 YKENLEHNR-IIVSEFGTVAMPDPCKN---FFQRFLSRFELPKLSDN-ANVSFVQYKGDY 166
Query: 268 LAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKVDPV--------SKELFA 318
+E + + +I P LET + +++ + + AHP VD S +
Sbjct: 167 YVSTETNFMH--KIDPE-TLETKEKVDWSKFIAVNGATAHPHVDSDGTTYNMGNSYTVKG 223
Query: 319 LSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFVVIPDQQVVF 373
Y+++ P K D + V +P P+ H FA++EN+VV +Q +
Sbjct: 224 AFYNIIMVPPNK--ENPNDTLEGASVVCSIPSEDKSKPSYYHSFAMSENYVVFIEQPIKM 281
Query: 374 KLQEMITG---GSPV---IY-DKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWE 426
L +++TG G + +Y D + + F ++ K + + + P + FH N +E
Sbjct: 282 DLLKIVTGKLRGKGINEGVYWDPKRNTVFHVINKRTGKLSLVKYYTKPLS-TFHQINCYE 340
Query: 427 EPETDEIVVIGSCMTP-ADSIFNECDESLK---SVLSEI 461
+ + +++ C + +I N ++LK S L E+
Sbjct: 341 D---NGFLIMDMCSSDDGQAINNYVIQNLKKSGSALDEV 376
Score = 109 (43.4 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 27/84 (32%), Positives = 44/84 (52%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
K+DL ++K + + + EP F+ + + EDDG IL+ V KS L +++
Sbjct: 473 KMDLQGKQIKVWKHA-GMFPSEPVFV--SSPGAVEEDDGVILSVVITPNQDKSTFLLVLD 529
Query: 576 AMNLQLEASIKLPSRVPYGFHGTF 599
A + ++P +PYGFHGTF
Sbjct: 530 AKTFEELGRAEVPKNIPYGFHGTF 553
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 142 (55.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 72/312 (23%), Positives = 126/312 (40%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P + G IP ING LRNG F +H+FDG ++H + NG+ +
Sbjct: 34 VEETPEPIPAKIKGHIPGWINGNLLRNGPGKFEFGEEKYNHWFDGMALLHQFQLRNGTVT 93
Query: 198 YACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVAN 257
Y +F ++ + + R V + G L + + +AR D + + AN
Sbjct: 94 YQSKFLQSNSYLINNQHNRIVVSE-FGTLAMPDPCKSV---FAR-FMSRFDPPKPSDNAN 148
Query: 258 AGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKVDPV---- 312
V + E++ Y+V P LE + ++ + + AHP P
Sbjct: 149 VSYVVYKGDYYVTGENNCMYKV--DPE-TLEMKEKVDWTKFVAVNGATAHPHYAPDGTAY 205
Query: 313 ----SKELFALSYDVVQKPYLKY-FRFSADGDK-----SPDVEIHLPVPTMMHDFAITEN 362
S F +Y++++ P K + +G K +P + P+ H F ++EN
Sbjct: 206 NMGNSYGKFGTTYNIIEVPPQKSNCNETLEGAKVLCSIAPTDNMK---PSYYHSFGMSEN 262
Query: 363 FVVIPDQQVVFKLQEMITG---GSPVI----YDKNKKSRFGILAKNAKDSNDIIWIESPD 415
+++ +Q + L +IT G P+ ++ +RF ++ K W P
Sbjct: 263 YIIFIEQPIKLNLLRIITSKFRGKPISEGINWEPQYNTRFHVVDKRTGKVLPGQWYTKPF 322
Query: 416 TFCFHLWNAWEE 427
FH NA+E+
Sbjct: 323 V-TFHQINAFED 333
Score = 106 (42.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 35/118 (29%), Positives = 57/118 (48%)
Query: 484 LEAGMVNRNSL-GRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFL 542
LE +N + GRK ++ Y + S KVD+ + K + D Y EP F+
Sbjct: 432 LEFPQINYSQYSGRKYRYFYGCGFRHFIGDS-LMKVDVETKNFK-IWQEDGSYPSEPVFV 489
Query: 543 PRDANNSENEDDGYILAFV-HDEKTWKSELQIVNAMNLQLEASIKLPSRVPYGFHGTF 599
P N+ ED G IL+ V ++ + L +++A + ++P ++PYGFHG F
Sbjct: 490 P--VPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRELGRAEVPVQMPYGFHGIF 545
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 144 (55.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 88/387 (22%), Positives = 156/387 (40%)
Query: 132 IGGNFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVT 190
IG + V E P + G IP ING +LRNG F H+FDG ++H
Sbjct: 27 IGPLVSSVEEIPDPITTLIKGQIPSWINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFN 86
Query: 191 IGNGSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHK 250
I +G +Y+ RF ++ +Q E R V + G L + + +AR F
Sbjct: 87 IKDGQVTYSSRFLQSDSYVQNSEKNRIVVSE-FGTLATPDPCKNI---FAR-FFSRFQIP 141
Query: 251 QGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKV 309
+ T A V + +E + + +I P LET + +++ + S AHP
Sbjct: 142 KTTDNAGVNFVKYKGDFYVSTETN--FMRKIDPVS-LETKEKVDWSKFIAVSAATAHPHY 198
Query: 310 DPVSKELFALSYDVVQKPYLKYFRFSADGDKSPD------VEI--HLPV-----PTMMHD 356
D + + +K + + G+K D EI +P P+ H
Sbjct: 199 DREGAT-YNMGNSYGRKGFFYHILRVPPGEKQDDDADLSGAEILCSIPAADPRKPSYYHS 257
Query: 357 FAITENFVVIPDQQVVFKLQEM----ITGGS--PVI-YDKNKKSRFGILAKNAKDSNDII 409
F ++EN++V +Q + L + I G S V+ ++ + F + ++ +
Sbjct: 258 FVMSENYIVFIEQPIKLDLLKFMLYRIAGKSFHKVMSWNPELDTIFHVADRHTGQLLNTK 317
Query: 410 WIESPDTFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIR--LNLK 466
+ S F H NA+EE + +++ C ++ E E+L+S ++ N
Sbjct: 318 YYSSA-MFALHQINAYEE---NGYLIMDMCCGDDGNVIGEFTLENLQSTGEDLDKFFNSL 373
Query: 467 TGESTRRQILS---ESDQVNLEAGMVN 490
RR +L + D+ N + ++N
Sbjct: 374 CTNLPRRYVLPLEVKEDEPN-DQNLIN 399
Score = 101 (40.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
K+DL ++K + + + EP F+P A ++++EDDG +++ + + KS L +++
Sbjct: 465 KMDLEGKKLKVWRHA-GLFPSEPVFIP--APDAQDEDDGVVMSVIITPREKKSSFLLVLD 521
Query: 576 AMNLQLEASIKLPSRVPYGFHGTF 599
A ++P +PYG HG F
Sbjct: 522 AKTFTELGRAEVPVDIPYGTHGLF 545
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 155 (59.6 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 81/327 (24%), Positives = 141/327 (43%)
Query: 135 NFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEP--VAGHHFFDGDGMVHAVTIG 192
N PE P++ V+GSIP + G LRNG LF + H+FDG ++H+ T
Sbjct: 8 NGIETPE-PLK--ADVSGSIPPWLQGTLLRNGPG-LFSVGNTSYKHWFDGMALIHSFTFK 63
Query: 193 NGSASYACRF--TETQR--LMQER----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLF 244
+G Y ++ +ET + + +R E G V+P N R + +
Sbjct: 64 DGEVFYRSKYLKSETYKKNIAADRIVVSEFGTMVYPDPC-----KNIFSRAFSYMMNAIP 118
Query: 245 GLVDHKQGTGVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTM 303
D+ + N ++ + A SE + Y +I P LET+GR N+ NH +
Sbjct: 119 DFTDNN----LIN--IIKYGEDYYASSE--VNYINQIDPL-TLETLGRTNYRNHIAINLA 169
Query: 304 IAHPKVDPVSKELFALSYDVVQKPYLKYFRF-----SADGD-KSP---DVE--IHLPV-- 350
AHP D + + ++ KY F ++D + K P +VE +P+
Sbjct: 170 TAHPHYDEEGNT-YNMGTAIMNLGRPKYVIFKVPANTSDKENKKPALSEVEQVCSIPIRP 228
Query: 351 ---PTMMHDFAITENFVVIPDQQVVFKLQEMITG-------GSPVIYDKNKKSRFGILAK 400
P+ H F +TEN+++ +Q + ++ T GS + +D++ + F ++ K
Sbjct: 229 SLYPSYFHSFGMTENYIIFVEQAFKLDIVKLATAYFRDINWGSCLKFDQDDINVFHLVNK 288
Query: 401 NAKDSNDIIWIESPDTFCFHLWNAWEE 427
+ + + P FH NA+E+
Sbjct: 289 KTGKAVSVKYYTDPFV-TFHHINAYED 314
Score = 85 (35.0 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 38/159 (23%), Positives = 68/159 (42%)
Query: 455 KSVLSEIRLNLKTGESTRRQILSESDQV---------NLEAGMVNRNSLGRKTQFAYLAI 505
K +I L +K ++T +L E V LE +N +K ++ Y
Sbjct: 369 KETPQDINL-VKLQDTTATAVLKEDGSVYCTPDIIFKGLELPAINYKFNSKKNRYFYGTR 427
Query: 506 AEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEK 565
E P + AKVD+ + K + + Y EP F+ + ++ +EDDG IL+ V
Sbjct: 428 VEWSPYPNKVAKVDVVT-RTHKIWTEEECYPSEPVFIA--SPDAVDEDDGVILSSVVSFN 484
Query: 566 TWKSE-LQIVNAMNLQLEASIKLPSRVPYGFHGTFVDSK 603
+ L +++A + + A + + + HG F+ K
Sbjct: 485 PQRPPFLVVLDAKSFKEIARATIDASIHMDLHGLFIHDK 523
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 124 (48.7 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 42/159 (26%), Positives = 70/159 (44%)
Query: 458 LSEIRLNL-KTGESTRRQILSESDQVNLEAGM--VNRNSLGRKTQFAYLAIAE------P 508
L ++ + L +TGE R + SDQ A +N + ++ +F Y A P
Sbjct: 454 LVQVAIELDRTGECRRCSVRRLSDQHARPADFPAINPSYANQRNRFVYAGAASGSRRFLP 513
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWK 568
+ KVD+S G + + K+ GEP F+P ED GY+L + +
Sbjct: 514 YFPFDSVVKVDVSDGSARWWSTDGRKFVGEPVFVPTGGG----EDGGYVLLVEYAVSKHR 569
Query: 569 SELQIVNAMNLQLE----ASIKLPSRV--PYGFHGTFVD 601
L +++A + E A +++P + P GFHG + D
Sbjct: 570 CHLVVLDAKKIGTENALVAKLEVPKNLTFPMGFHGFWGD 608
Score = 81 (33.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 32/142 (22%), Positives = 67/142 (47%)
Query: 303 MIAHPKVDPVSKELFALSYD----VVQKPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFA 358
++AH K+DP L ++ + ++ + + ++ F A D E +P M+HD+A
Sbjct: 260 LLAHYKIDPRRGRLLMVACNAEDMLLPRSHFTFYEFDAHFDLVQKREFVVPDHLMIHDWA 319
Query: 359 ITENFVVIPDQQVVFKLQEMI---TGGSPVI----YDKNKKSR-FGILAKNAK-DSNDII 409
T+ ++ ++ + + TG P+I D ++S +L ++ + ++
Sbjct: 320 FTDTHYILLGNRIKLDIPGSLLALTGTHPMIAALAVDPRRQSTPVYLLPRSPETEAGGRD 379
Query: 410 W---IESPDT-FCFHLWNAWEE 427
W IE+P + H+ NA+EE
Sbjct: 380 WSVPIEAPSQMWSVHVGNAFEE 401
Score = 67 (28.6 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 43/153 (28%), Positives = 64/153 (41%)
Query: 148 LPVT-GSIP-ECINGVYLRNGANPLFEPVAGH--HFFDGDGMVHAVTI--GNGSASYACR 201
L VT G+IP + G Y G +F G H DG G + + G+ + Y+ R
Sbjct: 73 LRVTEGAIPPDFPAGTYYLAGPG-IFSDDHGSTVHPLDGHGYLRSFRFRPGDRTIHYSAR 131
Query: 202 FTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLV 261
F ET +E G H G +L +G + + K VAN ++
Sbjct: 132 FVETAAKREESRDGA-------SWRFTHRGPFSVL----QGGKKVGNVKVMKNVANTSVL 180
Query: 262 YFNNRILAMSEDDLPYQVRITPSGDLETVGRYN 294
+ R+L + E PY+V P LETVG ++
Sbjct: 181 RWGGRLLCLWEGGQPYEV--DPR-TLETVGPFD 210
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 115 (45.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 75/312 (24%), Positives = 118/312 (37%)
Query: 150 VTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQRL 208
V G IPE +NG LR G F +H+FDG ++H + G+ +Y +F ++
Sbjct: 29 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTYKSKFLQSDTY 88
Query: 209 MQERELGRPVFPKAIGELHGHNGIGRLL-LFYARGLFGLVDHKQGTGVANAGLVYFNNRI 267
GR V + G L + + F +R F + T N V +
Sbjct: 89 KANSAGGRIVISE-FGTLALPDPCKSIFERFMSR--F---EPPTMTDNTNVNFVQYKGDY 142
Query: 268 LAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKEL-FALSYDVVQK 326
+E + +V I E V F +T AHP DP SY
Sbjct: 143 YMSTETNFMNKVDIEMLERTEKVDWSKFIAVNGAT--AHPHYDPDGTAYNMGNSYGPRGS 200
Query: 327 PYLKYFRFSADGDKSPDVEIH-LPV-----------PTMMHDFAITENFVVIPDQQVVFK 374
Y R K P IH V P+ H F +T+N+++ +Q V K
Sbjct: 201 CY-NIIRVPPK-KKEPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMK 258
Query: 375 LQEMITG---GSP----VIYDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEE 427
L ++IT G P + ++ +RF ++ K+ ++ P +H NA+E+
Sbjct: 259 LWKIITSKIRGKPFADGISWEPQYNTRFHVVDKHTGQLLPGMYYSMP-FLTYHQINAFED 317
Query: 428 PETDEIVVIGSC 439
+VI C
Sbjct: 318 ---QGCIVIDLC 326
Score = 106 (42.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
KVD+++ + + + + Y EP F+P ++ ED G IL+ V +S L +++
Sbjct: 449 KVDVTN-KTLRVWREEGFYPSEPVFVP--VPGADEEDSGVILSVVITPNQSESNFLLVLD 505
Query: 576 AMNLQLEASIKLPSRVPYGFHGTFV 600
A + ++P ++PYGFHGTFV
Sbjct: 506 AKSFTELGRAEVPVQMPYGFHGTFV 530
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 109 (43.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 535 YGGEPFFLPRDANNSENEDDGYILAFV-HDEKTWKSELQIVNAMNLQLEASIKLPSRVPY 593
Y EP F+P N E D G IL+ V + ++ L +++A N + ++P ++PY
Sbjct: 509 YPSEPIFVPVPGTNEE--DGGVILSVVITPNQNERNFLLVLDAKNFEELGRAEVPVQMPY 566
Query: 594 GFHGTFV 600
GFHGTFV
Sbjct: 567 GFHGTFV 573
Score = 86 (35.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P V G +P+ +NG LR G F +H+FDG ++H I G+
Sbjct: 61 VEETPKIISAQVRGHVPKWLNGYLLRIGPGKFEFGKDKYNHWFDGMALLHQFKIEKGTVM 120
Query: 198 YACRFTET 205
Y +F ++
Sbjct: 121 YRSKFLQS 128
Score = 69 (29.3 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 351 PTMMHDFAITENFVVIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAK 403
P+ H F +T N+++ +Q V L ++IT G + ++ +RF ++ K+
Sbjct: 278 PSYYHSFGMTRNYIIFIEQPVKMNLWKIITSKIRGKAFSDGISWEPQYNTRFHVVDKHTG 337
Query: 404 DSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSC 439
++ P FH NA+E+ VVI C
Sbjct: 338 QLLPGMYYSKPFV-TFHQINAFED---QGCVVIDLC 369
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 116 (45.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 532 DNKYGGEPFFLPRDANNSENEDDGYILAFV-HDEKTWKSELQIVNAMNLQLEASIKLPSR 590
D Y EP F+P A + ED G IL+ V ++ + L +++A N + ++P R
Sbjct: 506 DGFYPSEPVFVP--APGTREEDGGVILSVVITPDQNENNFLLVLDAKNFEELGRAEVPVR 563
Query: 591 VPYGFHGTFV 600
+PYGFHGTFV
Sbjct: 564 MPYGFHGTFV 573
Score = 82 (33.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P V G PE ++G LR G F H+FDG ++H + G+ +
Sbjct: 61 VEEMPQMVSAQVRGQFPEWLSGYLLRIGPGKFEFGKDEYSHWFDGMALLHQFRMEKGTVT 120
Query: 198 YACRFTET 205
Y +F ++
Sbjct: 121 YRSKFLQS 128
Score = 64 (27.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 22/96 (22%), Positives = 43/96 (44%)
Query: 351 PTMMHDFAITENFVVIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAK 403
P+ H F +T N+++ +Q + L +++T G + ++ +RF ++ K+
Sbjct: 278 PSYYHSFGMTRNYIIFIEQPLKMNLWKIVTSRIRGKAFSDGISWEPQYNTRFHVVDKHTG 337
Query: 404 DSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSC 439
++ P FH NA+E+ VVI C
Sbjct: 338 QLLPGMYYTKPFV-TFHQINAFED---QGCVVIDLC 369
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 116 (45.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
KVD+ + + K + D Y EP F+P N E D G IL+ V +S L +++
Sbjct: 473 KVDVVN-KTLKVWREDGFYPSEPVFVPVPGTNEE--DGGVILSVVITPNQNESNFLLVLD 529
Query: 576 AMNLQLEASIKLPSRVPYGFHGTFV 600
A N + ++P ++PYGFHGTF+
Sbjct: 530 AKNFEELGRAEVPVQMPYGFHGTFI 554
Score = 103 (41.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 81/373 (21%), Positives = 135/373 (36%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P V G P+ +NG LR G F +H+FDG ++H + G+ +
Sbjct: 38 VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 97
Query: 198 YACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLL-LFYARGLFGLVDHKQG-TGV 255
Y +F ++ R V + G L + + F +R F L T
Sbjct: 98 YRSKFLQSDTYKANSAKNRIVMSE-FGTLATPDPCKNVFERFMSR--FELPGKAAAMTDN 154
Query: 256 ANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKE 315
N V + +E + +V I E V F +T AHP DP
Sbjct: 155 TNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGAT--AHPHYDPDGTA 212
Query: 316 L--------FALSYDVVQKPYLKY-FRFSADGDK--SPDVEIHLPVPTMMHDFAITENFV 364
F SY V++ P K + G + P+ H F +T N++
Sbjct: 213 YNMGNSFGPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYI 272
Query: 365 VIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAKDSNDIIWIESPDTF 417
+ +Q + L ++ T G + ++ +RF ++ K+ + P
Sbjct: 273 IFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVDKHTGQLLPGRYYSKPFV- 331
Query: 418 CFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEI-RLNLKTGES-TRRQ 474
FH NA+E+ V+I C I ++L+ E+ ++ G S RR
Sbjct: 332 AFHHINAFED---QGCVIIDLCCQDNGRILEVYQLQNLRKAGEELDQVYNSAGRSFPRRF 388
Query: 475 ILSESDQVNLEAG 487
+L + +N G
Sbjct: 389 VLPLNVSLNAPEG 401
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 125 (49.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 70/316 (22%), Positives = 127/316 (40%)
Query: 140 PERPVRHGLPVTGSIPECINGVYLRNGANP-LFEPVAGHHFFDGDGMVHAVTIGNGSASY 198
PE P++ V G +P + GV LRNG +H+FDG ++H+ T NG Y
Sbjct: 13 PE-PIK--AEVQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGEVYY 69
Query: 199 ACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHK--QGTGVA 256
++ + E R V + G + + + +A+ F + H + T
Sbjct: 70 RSKYLRSDTYNCNIEANRIVVSE-FGTMAYPDPCKNI---FAKA-FSYLSHTIPEFTDNC 124
Query: 257 NAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKE 315
++ + A SE + + +I P LET+ + +++ + + +HP D
Sbjct: 125 LINIMKTGDDYYATSETN--FIRKIDPQ-TLETLDKVDYSKYVAVNLATSHPHYDSAGN- 180
Query: 316 LFALSYDVVQKPYLKYFRFSA-----DGDKSPDVEIHLPV-----------PTMMHDFAI 359
+ + +V K KY F + +K HL V P+ H F I
Sbjct: 181 ILNMGTSIVDKGRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGI 240
Query: 360 TENFVVIPDQQVVFKLQEMITG-------GSPVIYDKNKKSRFGIL-AKNAKDSNDIIWI 411
TEN++V +Q + ++ T S + + K K+ F + K K+ + +
Sbjct: 241 TENYIVFIEQPFKLDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDRKTKKEVSTKFYT 300
Query: 412 ESPDTFCFHLWNAWEE 427
++ +H NA+EE
Sbjct: 301 DA--LVLYHHINAYEE 314
Score = 91 (37.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 484 LEAGMVNRNSLGRKTQFAYLAIAEPW-PKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFL 542
+E VN + G+K ++ Y A W P + AK+++ + EV ++ D+ + EP F+
Sbjct: 402 IELPRVNYDYNGKKYKYVY-ATEVQWSPVPTKIAKLNVQTKEVL-HWGEDHCWPSEPIFV 459
Query: 543 PRDANNSENEDDGYILAFVHDEKTWKSE-LQIVNAMNLQLEASIKLPSRVPYGFHGTFVD 601
P + ++ ED+G +L V + K+ L I++A + + + HG F+
Sbjct: 460 P--SPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRATVNVEMHLDLHGMFIP 517
Query: 602 SKDL 605
DL
Sbjct: 518 QNDL 521
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 130 (50.8 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 66/261 (25%), Positives = 109/261 (41%)
Query: 143 PVRHGLPVTGSIPECINGVYLRNGANPLFEPVAG---HHFFDGDGMVHAVTIGNGSASYA 199
PVR VTG IP + G LRNG P V +H+FDG ++H+ TI +G Y
Sbjct: 15 PVR--AKVTGKIPAWLQGTLLRNG--PGMHTVGESRYNHWFDGLALLHSFTIRDGEVYYR 70
Query: 200 CRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANA- 258
++ + E R V + G + + + +++ F + H N
Sbjct: 71 SKYLRSDTYNTNIEANRIVVSE-FGTMAYPDPCKNI---FSKA-FSYLSHTIPDFTDNCL 125
Query: 259 -GLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKEL 316
++ A SE + Y +I P LET+ + ++ + + +HP D L
Sbjct: 126 INIMKCGEDFYATSETN--YIRKINPQ-TLETLEKVDYRKYVAVNLATSHPHYDEAGNVL 182
Query: 317 FALSYDVVQKPYLKY--FRFSA---DGDK---SP----DVEIHLPV-----PTMMHDFAI 359
+ +V+K KY F+ A +G K SP +V +P P+ H F +
Sbjct: 183 -NMGTSIVEKGKTKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGV 241
Query: 360 TENFVVIPDQQVVFKLQEMIT 380
TEN+V+ +Q + +M T
Sbjct: 242 TENYVIFLEQPFRLDILKMAT 262
Score = 84 (34.6 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 43/158 (27%), Positives = 67/158 (42%)
Query: 459 SEIRLNLKTGESTRRQILSESD-QV---------NLEAGMVNRNSLGRKTQFAYLAIAEP 508
+E+ NL ST L E D QV LE VN G++ ++ + A
Sbjct: 369 AEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLELPRVNYAHNGKQYRYVF-ATGVQ 427
Query: 509 W-PKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYIL-AFVHDEKT 566
W P + K D+ + K+ D+ + EP F+P A +++EDDG IL A V +
Sbjct: 428 WSPIPTKIIKYDILTKSSLKW-REDDCWPAEPLFVP--APGAKDEDDGVILSAIVSTDPQ 484
Query: 567 WKSELQIVNAMNLQLEASIKLPSRVPYGFHGTFVDSKD 604
L I++A + A + + HG F+ D
Sbjct: 485 KLPFLLILDAKSFTELARASVDVDMHMDLHGLFITDMD 522
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 116 (45.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
KVD+ + + K + D Y EP F+P N E D G IL+ V +S + +++
Sbjct: 496 KVDVVN-KTLKVWREDGFYPSEPVFVPAPGTNEE--DGGVILSVVITPNQNESNFILVLD 552
Query: 576 AMNLQLEASIKLPSRVPYGFHGTFV 600
A N + ++P ++PYGFHGTF+
Sbjct: 553 AKNFEELGRAEVPVQMPYGFHGTFI 577
Score = 92 (37.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 69/325 (21%), Positives = 119/325 (36%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P V G P+ +NG LR G F +H+FDG ++H + G+ +
Sbjct: 61 VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 120
Query: 198 YACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLL-LFYARGLFGLVDHKQG-TGV 255
Y +F ++ R V + G L + + F +R F L T
Sbjct: 121 YRSKFLQSDTYKANSAKNRIVISE-FGTLALPDPCKNVFERFMSR--FELPGKAAAMTDN 177
Query: 256 ANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPVSKE 315
N V + +E + +V I E V F +T H +D +
Sbjct: 178 TNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYN 237
Query: 316 L------FALSYDVVQKPYLKYFRFSAD-GDKSPDVEIHLPV-------PTMMHDFAITE 361
+ + SY V++ P K D G+ V++ + P+ H F +T
Sbjct: 238 MGNSFGPYGFSYKVIRVPPEK-----VDLGETIHGVQVICSIASTEKGKPSYYHSFGMTR 292
Query: 362 NFVVIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAKDSNDIIWIESP 414
N+++ +Q + L ++ T G + ++ +RF ++ K + P
Sbjct: 293 NYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKP 352
Query: 415 DTFCFHLWNAWEEPETDEIVVIGSC 439
FH NA+E+ V+I C
Sbjct: 353 FV-TFHQINAFED---QGCVIIDLC 373
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 120 (47.3 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 64/259 (24%), Positives = 108/259 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYYRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ + G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNIYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKVDPVSK---- 314
Y+ A +E + + +I P LET+ + + N+ + AHP ++
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIESDGTVYNI 192
Query: 315 -----ELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
+ F ++Y++++ P LK + D +V + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFTVAYNIIKIPPLKADK--EDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITGGS 383
V + V L + ++ S
Sbjct: 251 VFVETPVKINLFKFLSSWS 269
Score = 83 (34.3 bits), Expect = 8.7e-08, Sum P(2) = 8.7e-08
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 474 QILSESDQVNLEAGMVNRNSLGRKTQ-FAY-LAIAEPWPKVSGFAKVDLSSGEVKKYFYG 531
++L + E +N G K +AY L + P K+++ + E+ +
Sbjct: 406 EVLFSGPRQAFEFPQINYQKCGGKPYTYAYGLGLNHFVP--DKLCKLNVKTKEIWMWQEP 463
Query: 532 DNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE--LQIVNAMNLQLEASIKLPS 589
D+ Y EP F+ + ++ EDDG +L+ V + L ++NA +L A ++ +
Sbjct: 464 DS-YPSEPIFVSQP--DALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVET 520
Query: 590 RVPYGFHGTF 599
+P FHG F
Sbjct: 521 NIPVTFHGLF 530
Score = 53 (23.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 526 KKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSELQIVNAMNL 579
+KYF +NKY PF L N E D+G+++ D WK + N + L
Sbjct: 297 RKYF--NNKYRTSPFNLFHHINTYE--DNGFLIV---DLCCWKGFEFVYNYLYL 343
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 94 (38.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 151 TGSIPECINGVYLRNGANPLFE--PVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQRL 208
+GS+P + G LRNG +FE H+FDG G + +G Y+ R+ E++
Sbjct: 25 SGSVPSYLKGTMLRNGPG-MFEIGDTKYQHWFDGMGFIQRYHFEDGKMYYSARYLESENY 83
Query: 209 MQERELGRPV 218
+ E R V
Sbjct: 84 KKNMEAQRIV 93
Score = 93 (37.8 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 28/89 (31%), Positives = 42/89 (47%)
Query: 514 GFAKVDLSSGEVKKYFY-GDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-L 571
G K DL +G+ K + D + GEP F+P EDDG ++ V + +
Sbjct: 440 GIVKADLENGDHKVWRRENDKQICGEPIFVPNP--EGVREDDGILIVPVMTISDGQRPFV 497
Query: 572 QIVNAMNLQLEASIKLP-SRVPYGFHGTF 599
I+ A NL A +P +R+P GFH +
Sbjct: 498 LILEAKNLTEIARYTIPEARIPLGFHAFY 526
Score = 57 (25.1 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/97 (22%), Positives = 44/97 (45%)
Query: 351 PTMMHDFAITENFVVIPDQQVVFKLQEMI-------TGGSPVIYDKNKKSRFGILAKNAK 403
PT MH F ++EN++++ + + +++ I T + + +K + IL N K
Sbjct: 233 PTYMHSFGMSENYLIMFESPIRIDIKKFIMKRFITTTFRDCMKWHADKDVKIFIL--NKK 290
Query: 404 DSNDI-IWIESPDTFCFHLWNAWEEPETDEIVVIGSC 439
+ + ++ F FH N +E D +V+ C
Sbjct: 291 TGEQVPLKLKMAPFFTFHHANTFER---DGCLVVDYC 324
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 126 (49.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 63/254 (24%), Positives = 106/254 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG---HHFFDGDGMVHAVTIGNGSASYACRFTETQ 206
VTGSIP + G LRNG P V +H+FDG ++H+ +I +G Y ++ ++
Sbjct: 20 VTGSIPAWLQGTLLRNG--PGMHTVGESKYNHWFDGLALLHSFSIRDGEVFYRSKYLQSD 77
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANA--GLVYFN 264
+ E R V + G + + + +++ F + H N ++
Sbjct: 78 TYIANIEANRIVVSE-FGTMAYPDPCKNI---FSKA-FSYLSHTIPDFTDNCLINIMKCG 132
Query: 265 NRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKELFALSYDV 323
A +E + Y +I P LET+ + ++ + + +HP D L + V
Sbjct: 133 EDFYATTETN--YIRKIDPQ-TLETLEKVDYRKYVAVNLATSHPHYDEAGNVL-NMGTSV 188
Query: 324 VQKPYLKY--FRFSA---DGDK---SP--DVEIHLPV-------PTMMHDFAITENFVVI 366
V K KY F+ A D K SP E+ + P+ H F +TEN+VV
Sbjct: 189 VDKGRTKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVTENYVVF 248
Query: 367 PDQQVVFKLQEMIT 380
+Q + +M T
Sbjct: 249 LEQPFKLDILKMAT 262
Score = 75 (31.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/157 (24%), Positives = 66/157 (42%)
Query: 459 SEIRLNLKTGESTRRQILSESD-------QV---NLEAGMVNRNSLGRKTQFAYLAIAEP 508
+E+ NL ST L E D +V LE +N G+ ++ + A +
Sbjct: 369 AEVGSNLVKVSSTTATALKEKDGHVYCQPEVLYEGLELPRINYAYNGKPYRYIFAAEVQW 428
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYIL-AFVHDEKTW 567
P + K D+ + K+ ++ + EP F+P +++EDDG IL A V +
Sbjct: 429 SPVPTKILKYDILTKSSLKWSE-ESCWPAEPLFVPTPG--AKDEDDGVILSAIVSTDPQK 485
Query: 568 KSELQIVNAMNLQLEASIKLPSRVPYGFHGTFVDSKD 604
L I++A + A + + + HG F+ D
Sbjct: 486 LPFLLILDAKSFTELARASVDADMHLDLHGLFIPDAD 522
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 105 (42.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 512 VSGFAKVDLSSGEVKKYFYGDNKYG-GEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE 570
V G K D +GE K + ++ GE F+ D + E EDDG +L+ V D ++ +S
Sbjct: 480 VDGIVKFDSLTGETK--LWSEHAQSPGEAIFVA-DPDGKE-EDDGVLLSVVLDGRSGRSY 535
Query: 571 LQIVNAMNLQLEASIKLPSRVPYGFHGTFV 600
L +++A N++ + + V +GFHG V
Sbjct: 536 LLVLDAGNMKEIGRASVNAAVGFGFHGVHV 565
Score = 90 (36.7 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 33/148 (22%), Positives = 65/148 (43%)
Query: 305 AHPKVDPVSKELFALSYDVVQ-KPYLKYFRFSADGDKSPDVEIHLPVPTMMHDFAITENF 363
+H K DP + +++ + P + FR SA+ ++ + P +H F +T ++
Sbjct: 227 SHAKSDPETGDVYNYNLSFSSGTPTYRVFRVSAETGETSILAAFTAAPAYLHSFFLTGDY 286
Query: 364 VVIPDQQVVFKLQE-MITGGSPV----IYDKNKKSRFGILAKNAKDSNDIIWIESPDTFC 418
VVI + M GS + +D +++ ++ + + + ES FC
Sbjct: 287 VVICVWNAHLSPEGFMKKPGSYIGAIKEFDNQIPAKWYVVDR--RHGGLVAVYESQAFFC 344
Query: 419 FHLWNAWEE---PE---TDEIVVIGSCM 440
FH NAW+E P T ++ ++ C+
Sbjct: 345 FHTINAWQETSNPSDSSTSQLDIVAECI 372
Score = 48 (22.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 148 LPVTGSIPECINGVYLRNGANPL-FEPVAGH-----HFFDGDGMVH 187
L VTGSIP G R G + G+ H+FDG H
Sbjct: 34 LSVTGSIPHYAAGTLYRTGPGRYKVDTKHGNTFQVSHWFDGFSQTH 79
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 130 (50.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 65/261 (24%), Positives = 107/261 (40%)
Query: 143 PVRHGLPVTGSIPECINGVYLRNGANPLFEPVAG---HHFFDGDGMVHAVTIGNGSASYA 199
PVR VTG IP + G+ LRNG P V +H+FDG ++H+ TI +G Y
Sbjct: 15 PVR--ARVTGKIPAWLQGILLRNG--PGMHTVGETRYNHWFDGLALLHSFTIRDGEVYYR 70
Query: 200 CRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANA- 258
++ + E R V + G + + + +++ F + H N
Sbjct: 71 SKYLRSDTYTANIEANRIVVSE-FGTMAYPDPCKNI---FSKA-FSYLSHTIPDFTDNCL 125
Query: 259 -GLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKEL 316
++ A +E Y RI P LET+ + +F + + +HP D L
Sbjct: 126 INIMRCGEDFYATTETS--YIRRINPQ-TLETLEKVDFRKYVAVNLATSHPHYDAAGNVL 182
Query: 317 FALSYDVVQKPYLKY--FRFSAD---GDK---SP--DVEIHLPV-------PTMMHDFAI 359
+ +V K KY F+ A G K SP D E+ + P+ H F +
Sbjct: 183 -NVGTSIVDKGKTKYVIFKIPAPVPGGRKEGRSPLKDTEVFCSIAAHSLLSPSYYHSFGV 241
Query: 360 TENFVVIPDQQVVFKLQEMIT 380
+EN+++ +Q + +M T
Sbjct: 242 SENYIIFLEQPFKLDILKMAT 262
Score = 59 (25.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 28/126 (22%), Positives = 53/126 (42%)
Query: 459 SEIRLNL-KTGESTRRQILSESDQV---------NLEAGMVNRNSLGRKTQFAYLAIAEP 508
+E+ NL K +T R + + DQV LE +N G+ ++ + A +
Sbjct: 369 AEVGSNLIKLSSTTARALKEKDDQVYCQPELLCEGLELPHINYAHNGQPYRYIFAAGVQ- 427
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWK 568
W + + + + ++ + EP F+P +++EDDG IL+ + K
Sbjct: 428 WSPIPKLFYSSIVAQWSSLTWREEHCWPAEPLFVPTPG--AKDEDDGIILSAIVSTDPQK 485
Query: 569 SELQIV 574
S +V
Sbjct: 486 SPFLLV 491
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 117 (46.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 63/254 (24%), Positives = 106/254 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE A +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPTWLRGSLLRCGPG-LFEVGAEPFYHLFDGQALLHKFDFKEGHVTYHRRFVRTDA 88
Query: 207 --RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVYFN 264
R M E+ + F N R ++ +G+ + D+ V G Y+
Sbjct: 89 YVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYF-KGV-EVTDNAL-VNVYPVGEDYY- 144
Query: 265 NRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLK-STMIAHPKV--DPVSKEL----- 316
A +E + + +I P LET+ + + + + AHP V D +
Sbjct: 145 ----ACTETN--FITKINPD-TLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFG 197
Query: 317 --FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFVVIPDQ 369
F+L+Y++++ P L+ + D +V + P P+ +H F +T N++V +
Sbjct: 198 KNFSLAYNIIRIPPLQADK--EDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVET 255
Query: 370 QVVFKLQEMITGGS 383
V L + ++ S
Sbjct: 256 PVKINLLKFLSSWS 269
Score = 72 (30.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 533 NKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE--LQIVNAMNLQLEASIKLPSR 590
+ Y EP F+ ++ EDDG +L+ V + L I+NA ++ A ++
Sbjct: 464 DSYPSEPIFVSHP--DALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVN 521
Query: 591 VPYGFHGTF 599
+P FHG F
Sbjct: 522 IPVTFHGLF 530
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 121 (47.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 61/254 (24%), Positives = 105/254 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG---HHFFDGDGMVHAVTIGNGSASYACRFTETQ 206
VTGSIP + G LRNG P V +H+FDG ++H+ +I +G Y ++ ++
Sbjct: 20 VTGSIPAWLQGTLLRNG--PGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFYRSKYLQSD 77
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANA--GLVYFN 264
E R V + G + + + +++ F + H N ++
Sbjct: 78 TYNANIEANRIVVSE-FGTMAYPDPCKNI---FSKA-FSYLSHTIPDFTDNCLINIMKCG 132
Query: 265 NRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKELFALSYDV 323
A +E + Y +I P LET+ + ++ + + +HP D L + +
Sbjct: 133 EDFYATTETN--YIRKIDPQ-TLETLEKVDYRKYVAVNLATSHPHYDEAGNVL-NMGTSI 188
Query: 324 VQKPYLKYFRF----SADGDK----SP----DVEIHLPV-----PTMMHDFAITENFVVI 366
K KY F +A G K +P +V +P P+ H F +TEN+VV
Sbjct: 189 ADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENYVVF 248
Query: 367 PDQQVVFKLQEMIT 380
+Q + +M T
Sbjct: 249 LEQPFKLDILKMAT 262
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/153 (23%), Positives = 64/153 (41%)
Query: 459 SEIRLNLKTGESTRRQILSESD-------QV---NLEAGMVNRNSLGRKTQFAYLAIAEP 508
+E+ NL ST L E D +V LE +N G+ ++ + A +
Sbjct: 369 AEVGSNLVKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINYAHNGKPYRYIFAAEVQW 428
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWK 568
P + K D+ + K+ ++ + EP F+P +++EDDG IL+ + K
Sbjct: 429 SPVPTKILKYDVLTKSSLKWSE-ESCWPAEPLFVPTPG--AKDEDDGVILSAIISTDPQK 485
Query: 569 SE-LQIVNAMNLQLEASIKLPSRVPYGFHGTFV 600
L I++A + A + + HG F+
Sbjct: 486 LPFLLILDAKSFTELARASVDVDMHLDLHGLFI 518
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 121 (47.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 61/254 (24%), Positives = 105/254 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG---HHFFDGDGMVHAVTIGNGSASYACRFTETQ 206
VTGSIP + G LRNG P V +H+FDG ++H+ +I +G Y ++ ++
Sbjct: 20 VTGSIPAWLQGTLLRNG--PGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFYRSKYLQSD 77
Query: 207 RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANA--GLVYFN 264
E R V + G + + + +++ F + H N ++
Sbjct: 78 TYNANIEANRIVVSE-FGTMAYPDPCKNI---FSKA-FSYLSHTIPDFTDNCLINIMKCG 132
Query: 265 NRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMI-AHPKVDPVSKELFALSYDV 323
A +E + Y +I P LET+ + ++ + + +HP D L + +
Sbjct: 133 EDFYATTETN--YIRKIDPQ-TLETLEKVDYRKYVAVNLATSHPHYDEAGNVL-NMGTSI 188
Query: 324 VQKPYLKYFRF----SADGDK----SP----DVEIHLPV-----PTMMHDFAITENFVVI 366
K KY F +A G K +P +V +P P+ H F +TEN+VV
Sbjct: 189 ADKGGTKYVMFKIPATAPGSKKKGKNPLKHSEVFCSIPSRSLLSPSYYHSFGVTENYVVF 248
Query: 367 PDQQVVFKLQEMIT 380
+Q + +M T
Sbjct: 249 LEQPFKLDILKMAT 262
Score = 67 (28.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/153 (23%), Positives = 64/153 (41%)
Query: 459 SEIRLNLKTGESTRRQILSESD-------QV---NLEAGMVNRNSLGRKTQFAYLAIAEP 508
+E+ NL ST L E D +V LE +N G+ ++ + A +
Sbjct: 369 AEVGSNLVKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINYAHNGKPYRYIFAAEVQW 428
Query: 509 WPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWK 568
P + K D+ + K+ ++ + EP F+P +++EDDG IL+ + K
Sbjct: 429 SPVPTKILKYDVLTKSSLKWSE-ESCWPAEPLFVPTPG--AKDEDDGVILSAIISTDPQK 485
Query: 569 SE-LQIVNAMNLQLEASIKLPSRVPYGFHGTFV 600
L I++A + A + + HG F+
Sbjct: 486 LPFLLILDAKSFTELARASVDVDMHLDLHGLFI 518
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 120 (47.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 83/327 (25%), Positives = 135/327 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFE--PVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
V+G IP ++G LR G LFE +H FDG ++H + +G +Y RF T
Sbjct: 30 VSGEIPAWLSGSLLRMGPG-LFEVGDEPFYHLFDGQALLHKFDLKDGRVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G +P N R ++ QG V +
Sbjct: 89 YVRAMTEKRVVITEFGTTAYPDPC-----KNIFSRFFTYF-----------QGIEVTDNC 132
Query: 260 LV--Y-FNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKVDP---- 311
LV Y A +E + + ++ P LETV + + N+ + + AHP ++
Sbjct: 133 LVNIYPIGEDFYACTETN--FITKVDPD-TLETVKKVDLCNYLSVNGLTAHPHIEADGTV 189
Query: 312 ------VSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAIT 360
K + +L+Y++V+ P L+ + S +KS + + P P+ +H F IT
Sbjct: 190 YNIGNCFGKNM-SLAYNIVKIPPLQEDK-SDQFEKSK-ILVQFPSSERFKPSYVHSFGIT 246
Query: 361 ENFVVIPDQQVVFKLQEMITG----GSPVI--YDKNKK--SRFGILAKNAKDSNDIIWIE 412
EN V + V L + +T GS + ++ N K + F + AKN D +
Sbjct: 247 ENHFVFVETPVKINLLKFLTSWSIRGSNYMDCFESNDKMGTWFHLAAKNPGKYIDHKFRT 306
Query: 413 SPDTFCFHLWNAWEEPETDEIVVIGSC 439
S FH N +E+ +V+ C
Sbjct: 307 SAFNI-FHHINCFED---QGFIVVDLC 329
Score = 67 (28.6 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 474 QILSESDQVNLEAGMVNRNSL-GRKTQFAY-LAIAEPWPKVSGFAKVDLSSGEVKKYFYG 531
++L + E +N + G+ FAY L + P K+++ S E +
Sbjct: 406 EVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLGLNHFVP--DRICKLNVKSKETWIWQEP 463
Query: 532 DNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE--LQIVNAMNLQLEASIKLPS 589
D Y EP F+ + ++E+EDDG +L+ V + L I+ A +L A ++
Sbjct: 464 D-AYPSEPLFV--QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDV 520
Query: 590 RVPYGFHGTF 599
+P HG +
Sbjct: 521 LIPLTLHGIY 530
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 104 (41.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 55/258 (21%), Positives = 104/258 (40%)
Query: 135 NFAPVPERPVRHGLPVTGSIPECINGVYLRNGANPLFEPVAGH-HFFDGDGMVHAVTIGN 193
NF VPE P GS+P + G LRNG + H+FDG G + +
Sbjct: 12 NFENVPE-PKE--CKKVGSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGLGFMQRYHFED 68
Query: 194 GSASYACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGT 253
G Y+ R+ E++ + E R + G L + + +++ ++H +
Sbjct: 69 GKMFYSARYLESEAYTKTVEAQR-IVAGTFGTLSFPDPCKTI---FSKYFSEFMNHSEKH 124
Query: 254 GVANAGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-------NHQL--KSTMI 304
+N + + A +E Y+V + LE F HQL ++ +
Sbjct: 125 DNSNVAFTPVGDSLYACTETPHMYRVDLDTLKTLEAADFSKFVAVHSCTAHQLYDENGDV 184
Query: 305 AH--PKVDPVSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-PTMMHDFAITE 361
+ + P S +F ++ + + + K +++ P+ PT MH F ++E
Sbjct: 185 YNIGSRFGPESAHVFTVTKNPKNQKSENDHSWEHTS-KIGEIKASDPLYPTYMHSFGMSE 243
Query: 362 NFVVIPDQQVVFKLQEMI 379
N++V+ + V LQ+ +
Sbjct: 244 NYLVMFESPVRLHLQKYL 261
Score = 83 (34.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 512 VSGFAKVDLSSGEVKKYFYGDNKYG--GEPFFLPRDANNSENEDDGYILAFV--HDEKTW 567
++G K DL G + +N + GEP F+P EDDG ++ + EK
Sbjct: 437 LAGVVKADLKFGN-HLIWNRENPHQICGEPIFVPNP--EGIEEDDGILIVPIMSSSEKQV 493
Query: 568 KSELQIVNAMNLQLEASIKLP-SRVPYGFHGTF 599
L I++A L+ A ++P +R+P GFH +
Sbjct: 494 PFVL-ILDAKTLEETARFEIPEARIPLGFHAFY 525
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 117 (46.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 79/327 (24%), Positives = 135/327 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFE--PVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
V+G IP ++G LR G LFE +H FDG ++H + +G +Y +F T
Sbjct: 30 VSGKIPAWLSGSLLRMGPG-LFEIGDEPFNHLFDGQALIHKFDLKDGRVTYHRKFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVA-NA 258
R M E+ ELG +P N R ++ QGT V N
Sbjct: 89 YVRAMTEKRVVITELGTAAYPDPC-----KNIFSRFFTYF-----------QGTEVTDNC 132
Query: 259 GL-VY-FNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKVDP---- 311
+ +Y A +E + + ++ P LET+ + + N+ + + AHP ++
Sbjct: 133 SVNIYPIGEDFYACTETN--FITKVNPD-TLETIKKVDLCNYLSVNGLTAHPHIEADGTV 189
Query: 312 ------VSKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAIT 360
K + +L+Y++V+ P L+ + +D V + P P+ +H F +T
Sbjct: 190 YNIGNCFGKNM-SLAYNIVKIPPLQEEK--SDPLAMSKVLVQFPSSERFKPSYVHSFGMT 246
Query: 361 ENFVVIPDQQVVFKLQEMITG----GSPVI--YDKNKK--SRFGILAKNAKDSNDIIWIE 412
EN V + V L + +T GS + ++ N + + F + AKN D +
Sbjct: 247 ENHFVFVETPVKINLLKFLTSWSIRGSNYMDCFESNDRMGTWFHLAAKNPGKYIDHKFRT 306
Query: 413 SPDTFCFHLWNAWEEPETDEIVVIGSC 439
S FH N +E+ +V+ C
Sbjct: 307 SAFNI-FHHINCFED---QGFIVVDLC 329
Score = 67 (28.6 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 474 QILSESDQVNLEAGMVNRNSL-GRKTQFAY-LAIAEPWPKVSGFAKVDLSSGEVKKYFYG 531
++L + E +N + G+ FAY L + P K+++ S E +
Sbjct: 406 EVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLGLNHFVP--DRICKLNVKSKETWIWQEP 463
Query: 532 DNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE--LQIVNAMNLQLEASIKLPS 589
D Y EP F+ + ++E+EDDG +L+ V + L I+ A +L A ++
Sbjct: 464 D-AYPSEPLFV--QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDV 520
Query: 590 RVPYGFHGTF 599
+P HG +
Sbjct: 521 LIPLTLHGIY 530
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 134 (52.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 99/430 (23%), Positives = 174/430 (40%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ + G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNIYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL 316
Y+ A +E + + +I P LET+ + + N+ + AHP + D +
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNI 192
Query: 317 -------FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
F+++Y++V+ P L+ + D ++ + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFSIAYNIVKIPPLQADK--QDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITG----GSPVI--YDKNKKSR--FGILAKNAKDSNDIIWIESPDT 416
V + V L + ++ G+ + ++ N+ I K K + + SP
Sbjct: 251 VFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFN 310
Query: 417 FCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIRLNLKTGES--TRR 473
FH N +E+ E ++V C + ++N +L+ E++ N + RR
Sbjct: 311 L-FHHINTYEDNEF--LIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRR 367
Query: 474 QILSESDQVNLEAGMVNRN--SLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFY 530
+L +N++ +N +L T A L E W + + E + Y
Sbjct: 368 YVLP----LNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINY 423
Query: 531 GDNKYGGEPF 540
KYGG+P+
Sbjct: 424 --QKYGGKPY 431
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 98/430 (22%), Positives = 174/430 (40%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ + G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNIYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL 316
Y+ A +E + + ++ P LET+ + + N+ + AHP + D +
Sbjct: 141 EDYY-----ACTETN--FITKVNPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNI 192
Query: 317 -------FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
F+++Y++V+ P L+ + D ++ + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFSIAYNIVKIPPLQADK--EDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITG----GSPVI--YDKNKKSR--FGILAKNAKDSNDIIWIESPDT 416
V + V L + ++ G+ + ++ N+ I K K + + SP
Sbjct: 251 VFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFN 310
Query: 417 FCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIRLNLKTGES--TRR 473
FH N +E+ E ++V C + ++N +L+ E++ N + RR
Sbjct: 311 L-FHHINTYEDHEF--LIVDLCCWKGFEFVYNYSYLANLRENWEEVKKNARKAPQPEVRR 367
Query: 474 QILSESDQVNLEAGMVNRN--SLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFY 530
+L +N++ +N +L T A L E W + + E + Y
Sbjct: 368 YVLP----LNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINY 423
Query: 531 GDNKYGGEPF 540
KYGG+P+
Sbjct: 424 --QKYGGKPY 431
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 98/429 (22%), Positives = 170/429 (39%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ V G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNVYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL 316
Y+ A +E + + +I P LET+ + + N+ + AHP + D +
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNI 192
Query: 317 -------FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
F+++Y++V+ P L+ + D +V + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFSIAYNIVKIPPLQADK--EDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITGGSPVIYDKNKKSRF------GILAKNAKDSNDIIWIESPDTFC 418
V + V L + ++ S ++ N F G+ A T
Sbjct: 251 VFVETPVKINLLKFLSSWS--LWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSS 308
Query: 419 FHLWNAWEEPETDEIVVIGSCMTPA-DSIFNECD-ESLKSVLSEIRLNLKTGES--TRRQ 474
F+L++ E +E +++ C + ++N +L+ E++ N + RR
Sbjct: 309 FNLFHHINTYEDNEFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRY 368
Query: 475 ILSESDQVNLEAGMVNRN--SLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFYG 531
+L +N++ +N +L T A L E W + + E + Y
Sbjct: 369 VLP----LNIDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINY- 423
Query: 532 DNKYGGEPF 540
KYGG+P+
Sbjct: 424 -QKYGGKPY 431
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 120 (47.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 105/456 (23%), Positives = 179/456 (39%)
Query: 151 TGSIPECINGVYLRNGANP--LFEPVAGHHFFDGDGMVHAVTIGNGSASYACRFTETQRL 208
+G IP+ I G LRNG + + GH FD ++H I NG +Y RF +T+ L
Sbjct: 62 SGHIPKWICGSLLRNGPGSWKVGDMTFGH-LFDCSALLHRFAIRNGRVTYQNRFVDTETL 120
Query: 209 MQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGL-VY-FNNR 266
+ R R V + G + + +A +F + +G N+ + +Y F ++
Sbjct: 121 RKNRSAQRIVVTE-FGTAAVPDPCHSIFDRFA-AIF-----RPDSGTDNSMISIYPFGDQ 173
Query: 267 ILAMSEDDLPYQVRITPSGDLETVGRY---NFNHQLKSTMIAHPKVDPVSKELFALSYDV 323
+E P+ RI P L T R +F + T +HP V P S ++ L +
Sbjct: 174 YYTFTET--PFMHRINPC-TLATEARICTTDFVGVVNHT--SHPHVLP-SGTVYNLGTTM 227
Query: 324 VQK-PYLKYFRFSADGDKSPDVEI--HLPV-----PTMMHDFAITENFVVIPDQQVVFKL 375
+ P F D + LP P MH F +T+++ VI +Q + L
Sbjct: 228 TRSGPAYTILCFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSL 287
Query: 376 QEMIT---GGSPVI----YDKNKKSRFGILAKNAKDSNDIIWIESPDTFCFHLWNAWEEP 428
E I GG + + +++ + F ++ + + + ES F H+ N +E
Sbjct: 288 TEYIKAQLGGQNLSACLKWFEDRPTLFHLIDRVS--GKLVQTYESEAFFYLHIINCFER- 344
Query: 429 ETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRQILSESDQVNLEAGM 488
D VV+ C S N E + + E N++T + + L G
Sbjct: 345 --DGHVVVDIC-----SYRNP--EMINCMYLEAIANMQTNPNYATLFRGRPLRFVLPLGT 395
Query: 489 VNRNSLGRKTQFAYLAIAE-PWPKVSGFAKVDLSSGEVKKYFYGDNKYGGEPFFLP-RDA 546
+ S+ ++ ++A P+VS K +S Y + K P RDA
Sbjct: 396 IPPASIAKRGLVKSFSLAGLSAPQVSRTMKHSVSQYADITYMPTNGKQATAGEESPKRDA 455
Query: 547 NNSENEDDGYILAFVHDEKTWKSELQIVNAMNLQLE 582
E++ ++ V E + Q N + L+ E
Sbjct: 456 KRGRYEEEN-LVNLVTMEGSQAEAFQGTNGIQLRPE 490
Score = 59 (25.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 155 PECINGVYLRNGANPLFEPVAGHH 178
P C + V+LR+ + +P+ GHH
Sbjct: 38 PNCSSDVWLRSCEREIVDPIEGHH 61
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 110 (43.8 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 62/255 (24%), Positives = 109/255 (42%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP I G LR G LFE A +H FDG ++H NG +Y +F +T
Sbjct: 30 VTGRIPSFIKGSLLRLGPG-LFEAGAEPFYHLFDGQALMHKFDFSNGQVTYFRKFVKTDA 88
Query: 207 --RLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAGLVY-F 263
R + E+ + F N R ++ +G+ + D+ + N VY
Sbjct: 89 YVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYF-KGV-EVTDNC----LVN---VYPI 139
Query: 264 NNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL---- 316
A++E + +V + LET+ + + N+ + + AHP + D +
Sbjct: 140 GEDFYAVTETNYITKVNVDT---LETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCM 196
Query: 317 ---FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFVVIPD 368
+L+Y++V+ P + + +D + V + P P+ +H F +TEN+ V +
Sbjct: 197 GKGASLAYNIVRIPPTQ--KDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVE 254
Query: 369 QQVVFKLQEMITGGS 383
V L + ++ S
Sbjct: 255 TPVKINLLKFLSAWS 269
Score = 64 (27.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 32/124 (25%), Positives = 54/124 (43%)
Query: 478 ESDQVNLEAGMVNRNSLGRKTQFAY-LAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYG 536
E Q+N MVN G+ +AY L + P K+++ + E + D+ Y
Sbjct: 417 EFPQINYR--MVN----GKNYTYAYGLGLNHFVP--DRICKLNVRTKETWVWQEPDS-YP 467
Query: 537 GEPFFLPRDANNSENEDDGYILAFVHDEKTWK-SELQIVNAMNLQLEASIKLPSRVPYGF 595
EP F+ + +EDDG ++ V + + I+NA +L A ++ P F
Sbjct: 468 SEPLFV--QTPDGVDEDDGILMTIVVSPGAQRPTYCLILNAKDLSEIARAEVEILTPVTF 525
Query: 596 HGTF 599
HG +
Sbjct: 526 HGMY 529
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 116 (45.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 517 KVDLSSGEVKKYFYGDNKYGGEPFFLPRDANNSENEDDGYILAFVHDEKTWKSE-LQIVN 575
KVD+ + + K + D Y EP F+P N E D G IL+ V +S + +++
Sbjct: 391 KVDVVN-KTLKVWREDGFYPSEPVFVPAPGTNEE--DGGVILSVVITPNQNESNFILVLD 447
Query: 576 AMNLQLEASIKLPSRVPYGFHGTFV 600
A N + ++P ++PYGFHGTF+
Sbjct: 448 AKNFEELGRAEVPVQMPYGFHGTFI 472
Score = 55 (24.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/96 (21%), Positives = 40/96 (41%)
Query: 351 PTMMHDFAITENFVVIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAK 403
P+ H F +T N+++ +Q + L ++ T G + ++ +RF ++ K
Sbjct: 177 PSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTG 236
Query: 404 DSNDIIWIESPDTFCFHLWNAWEEPETDEIVVIGSC 439
+ P FH NA+E+ V+I C
Sbjct: 237 QLLPGRYYSKPFV-TFHQINAFED---QGCVIIDLC 268
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 105 (42.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 80/375 (21%), Positives = 136/375 (36%)
Query: 139 VPERPVRHGLPVTGSIPECINGVYLRNGANPL-FEPVAGHHFFDGDGMVHAVTIGNGSAS 197
V E P V G PE ++G LR G F +H+FDG ++H + G+ +
Sbjct: 39 VEETPQVISAGVQGHFPEWLSGYLLRVGPGKFEFGKDKYNHWFDGMALLHQFKVEKGTVT 98
Query: 198 YACRFTETQRLMQERELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVAN 257
Y +F ++ + R V + G L + + + R + T N
Sbjct: 99 YRSKFLQSDTYKANSDRDRIVISE-FGTLALPDPCKNV---FER-FMSKFEKPAITDNTN 153
Query: 258 AGLVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNFNHQLKSTMIAHPKVDPV----- 312
V + +E + +V I E V F +T AHP DP
Sbjct: 154 VNYVLYKGDYYLSTETNFMNKVDIETLEKTEKVNWTKFIAVNGAT--AHPHYDPDGTTYN 211
Query: 313 ---SKELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-------PTMMHDFAITEN 362
S Y+V++ P K S G+ ++ + P+ H F +T N
Sbjct: 212 MGNSYGKHGSCYNVIRVPPEK----SDPGETIHGAQVICSIASEEGMRPSYYHSFGMTRN 267
Query: 363 FVVIPDQQVVFKLQEMITG---GSP----VIYDKNKKSRFGILAKNAKDSNDIIWIESPD 415
+++ +Q + L +I+ G + ++ +RF ++ K+ ++ P
Sbjct: 268 YIIFIEQPLKINLWRIISSKIRGKAFSDGISWEPQYNTRFHVVDKHTGQLLPGMYFSKPF 327
Query: 416 TFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIR--LNLKTGESTR 472
FH NA+E+ VVI C I ++L+ E+ NL S R
Sbjct: 328 V-TFHQINAFED---QGCVVIDLCCQDDGGILEVYQLQNLRKTGKELDQVYNLIARNSPR 383
Query: 473 RQILSESDQVNLEAG 487
R +L +N G
Sbjct: 384 RFVLPLLGNLNAPEG 398
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 480 DQVNLEAGMVNRNSL-GRKTQFAYLAIAEPWPKVSGFAKVDLSSGEVKKYFYGDNKYGGE 538
++ ++E +N G+K QF Y KVD+ + + ++ + D Y E
Sbjct: 433 EEGSIEFPQINYGQFNGKKYQFFY-GCGFRHLVGDSLIKVDVVN-KTRRVWREDGFYPSE 490
Query: 539 PFFLPRDANNSENEDDGYILAFV 561
P F+P + EDDG IL+ V
Sbjct: 491 PVFVP--VPGASKEDDGVILSVV 511
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 97/429 (22%), Positives = 169/429 (39%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ V G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNVYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL 316
Y+ A +E + + +I P LET+ + + N+ + AHP + D +
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNI 192
Query: 317 -------FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
F+++Y++V+ P L+ + D +V + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFSIAYNIVKIPPLQADK--EDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITGGSPVIYDKNKKSRF------GILAKNAKDSNDIIWIESPDTFC 418
V + V L + ++ S ++ N F G+ A T
Sbjct: 251 VFVETPVKINLLKFLSSWS--LWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSS 308
Query: 419 FHLWNAWEEPETDEIVVIGSCMTPA-DSIFNECD-ESLKSVLSEIRLNLKTGES--TRRQ 474
F+L++ E +E +++ C + ++N +L+ E++ N + RR
Sbjct: 309 FNLFHHINTYEDNEFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRY 368
Query: 475 ILSESDQVNLEAGMVNRN--SLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFYG 531
+L +N++ +N +L T A L E W + + E + Y
Sbjct: 369 VLP----LNIDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINY- 423
Query: 532 DNKYGGEPF 540
K GG+P+
Sbjct: 424 -QKSGGKPY 431
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 98/430 (22%), Positives = 172/430 (40%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ RG+ + D+ V G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-RGV-EVTDNAL-VNVYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKV--DPVSKEL 316
Y+ A +E + + +I P LET+ + + N+ + AHP + D +
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNI 192
Query: 317 -------FALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
F+++Y++V+ P L+ + D ++ + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFSIAYNIVKIPPLQADK--EDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITG----GSPVI--YDKNKKSR--FGILAKNAKDSNDIIWIESPDT 416
V + V L + ++ G+ + ++ N+ I K K + + SP
Sbjct: 251 VFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFN 310
Query: 417 FCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIRLNLKTGES--TRR 473
FH N +E+ ++V C + ++N +L+ E++ N + RR
Sbjct: 311 L-FHHINTYED--NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRR 367
Query: 474 QILSESDQVNLEAGMVNRN--SLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFY 530
+L +N++ +N +L T A L E W + + E + Y
Sbjct: 368 YVLP----LNIDKADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINY 423
Query: 531 GDNKYGGEPF 540
KY G+P+
Sbjct: 424 --QKYCGKPY 431
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 121 (47.7 bits), Expect = 0.00053, P = 0.00053
Identities = 99/430 (23%), Positives = 178/430 (41%)
Query: 150 VTGSIPECINGVYLRNGANPLFEPVAG--HHFFDGDGMVHAVTIGNGSASYACRFTETQ- 206
VTG IP + G LR G LFE + +H FDG ++H G +Y RF T
Sbjct: 30 VTGRIPLWLTGSLLRCGPG-LFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDA 88
Query: 207 --RLMQER-----ELGRPVFPKAIGELHGHNGIGRLLLFYARGLFGLVDHKQGTGVANAG 259
R M E+ E G FP N R ++ +G+ + D+ + G
Sbjct: 89 YVRAMTEKRIVITEFGTCAFPDPC-----KNIFSRFFSYF-KGV-EVTDNAL-VNIYPVG 140
Query: 260 LVYFNNRILAMSEDDLPYQVRITPSGDLETVGRYNF-NHQLKSTMIAHPKVDPVSK---- 314
Y+ A +E + + +I P LET+ + + N+ + AHP ++
Sbjct: 141 EDYY-----ACTETN--FITKINPE-TLETIKQVDLCNYISVNGATAHPHIESDGTVYNI 192
Query: 315 -----ELFALSYDVVQKPYLKYFRFSADGDKSPDVEIHLPV-----PTMMHDFAITENFV 364
+ F ++Y++++ P LK + D +V + P P+ +H F +T N++
Sbjct: 193 GNCFGKNFTVAYNIIKIPPLKADK--EDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYI 250
Query: 365 VIPDQQVVFKLQEMITG----GSPVI--YDKNKKSRFGI-LA--KNAKDSNDIIWIESPD 415
V + V L + ++ G+ + ++ N+ + +A K K N+ + SP
Sbjct: 251 VFVETPVKINLFKFLSSWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNK-YRTSPF 309
Query: 416 TFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECD-ESLKSVLSEIRLN-LKTGE-STR 472
FH N +E+ ++V C + ++N +L+ E++ N +K + R
Sbjct: 310 NL-FHHINTYED--NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKRNAMKAPQPEVR 366
Query: 473 RQILSES-DQVNLEAGMVNRNSLGRKTQFAYLAIAEP-WPKVSGFAKVDLSSGEVKKYFY 530
R +L + D+V+ +V +L T A L E W + + E + Y
Sbjct: 367 RYVLPLTIDKVDTGRNLV---TLPHTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINY 423
Query: 531 GDNKYGGEPF 540
K+GG+P+
Sbjct: 424 --QKFGGKPY 431
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 609 596 0.00084 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 52
No. of states in DFA: 622 (66 KB)
Total size of DFA: 346 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 53.64u 0.22s 53.86t Elapsed: 00:00:03
Total cpu time: 53.65u 0.22s 53.87t Elapsed: 00:00:03
Start: Mon May 20 16:20:08 2013 End: Mon May 20 16:20:11 2013