Citrus Sinensis ID: 007296

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------61
MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMDKGTDAVDILEGKSYKLRYPWIGVVNRSQADINKSVDMIAARRREHEYFKNSPEYGHLTDRMGSEYLGKVLSKHLETVIKSRIPGLQSLISKTISELEAELTRLGKPIANDAGGKLYTAMEISRAFDQIFKEHLDGVRPGGDKIYGVFDNQLPAGLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVTIRGPAEAAVDAIHGILKELVQKSISETVELKQYPTLRVEVGNAAIQSLERMRDESRRATLQLVDMECCYLTVEFFRKLPQDAEKGGNPTHSIFDRYSDTYLRRIGSTVLSYVNMVCASLRHSIPKSVVYCQVREAKRSLLDYFFAELGKKEIKQLSSLLDEDPAVMQRRTNLAKRLELYRSAQSEIEMVAWDK
ccHHHHHHHHHHHHHHHHcccccccccccccccccCEEEEccccccccHHHHHccccccccccccccccccEEEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccccCECccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHcccccccEEEEEccccccccccHHHHHHccccccccccEEEEEEccHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
*DNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISD**********AISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMDKGTDAVDILEGKSYKLRYPWIGVVNRSQADINKSVDMIAARRREHEYFKNSPEYGHLTDRMGSEYLGKVLSKHLETVIKSRIPGLQSLISKTISELEAELTRLGKPIANDAGGKLYTAMEISRAFDQIFKEHLDGVRPGGDKIYGVFDNQLPAGLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVTIRGPAEAAVDAIHGILKELVQKSISETVELKQYPTLRVEVGNAAIQSLERMRDESRRATLQLVDMECCYLTVEFFRKLPQDAEKGGNPTHSIFDRYSDTYLRRIGSTVLSYVNMVCASLRHSIPKSVVYCQVREAKRSLLDYFFAELGKKEIKQLSSLLDEDPAVMQRRTNLAKRLELYRSAQSEIEMVAWD*
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MDNLITLVNKIQRACTALGDHGEESALPTLWDSLPSIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKIQEGKEYAEFMHLPRKRFNDFAAVRKEISDETDRETGRSKAISTVPIHLSIFSPNVVNLTLIDLPGLTKVAVDGQPESIVQDIENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPRGDRTFGVLTKIDLMDKGTDAVDILEGKSYKLRYPWIGVVNRSQADINKSVDMIAARRREHEYFKNSPEYGHLTDRMGSEYLGKVLSKHLETVIKSRIPGLQSLISKTISELEAELTRLGKPIANDAGGKLYTAMEISRAFDQIFKEHLDGVRPGGDKIYGVFDNQLPAGLKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGYRRLIESCLVTIRGPAEAAVDAIHGILKELVQKSISETVELKQYPTLRVEVGNAAIQSLERMRDESRRATLQLVDMECCYLTVEFFRKLPQDAEKGGNPTHSIFDRYSDTYLRRIGSTVLSYVNMVCASLRHSIPKSVVYCQVREAKRSLLDYFFAELGKKEIKQLSSLLDEDPAVMQRRTNLAKRLELYRSAQSEIEMVAWDK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Dynamin-related protein 1B Putative microtubule-associated force-producing protein.confidentQ84XF3
Dynamin-related protein 12A Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May be involved in attaching Golgi-derived vesicles to microtubules which direct vesicles to the forming cell plate during cytokinesis. Possesses intrinsic GTPase activity in vitro.confidentQ39821
Dynamin-related protein 5A Microtubule-associated force-producing protein.confidentQ39828

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3T34, chain A
Confidence level:very confident
Coverage over the Query: 2-318
View the alignment between query and template
View the model in PyMOL
Template: 3ZVR, chain A
Confidence level:very confident
Coverage over the Query: 1-603
View the alignment between query and template
View the model in PyMOL