BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007298
(609 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P51612|XPC_MOUSE DNA repair protein complementing XP-C cells homolog OS=Mus musculus
GN=Xpc PE=1 SV=2
Length = 930
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 251/513 (48%), Gaps = 49/513 (9%)
Query: 17 SCDKKENVCETSSKGSPECKYSSPKSNNTQSKKSPVSCELSSGNLDPSSSMACSDISEAC 76
SC + E E +G P + + + ++S S + +PSS E C
Sbjct: 395 SCSEGEEA-EQKVQGRPHARKRRVAAKVSYKEESESDGAGSGSDFEPSSGEGQHSSDEDC 453
Query: 77 HPKEKSQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLPVKRLKKI 136
P + Q KR Q A S + T + + C + SS+ KR KK+
Sbjct: 454 EPGPRKQ--KRAS----APQRTKAGSKSASKTQRGSQC-EPSSFPEASSSSSGCKRGKKV 506
Query: 137 ESGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAA 196
SG + + RK W EVYC + KWV VD + ++ Q V
Sbjct: 507 SSG---------AEEMADRKPAGVDQWLEVYCEPQ---AKWVCVDCVHGVVG--QPVACY 552
Query: 197 AAACKTSLRYIVAFAGCG-AKDVTRRYCMKWYRIASK-RVNSAWWDAVLAPLRELESGAT 254
A K + Y+V G +DVT+RY W K RV++ WW L P R
Sbjct: 553 KYATK-PMTYVVGIDSDGWVRDVTQRYDPAWMTATRKCRVDAEWWAETLRPYR------- 604
Query: 255 GDLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILY 314
S + +R ED E + + L +PLPT+ YKNH LY ++R L K+Q +Y
Sbjct: 605 -----------SLLTEREKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIY 653
Query: 315 PK-GPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKANEVPVKVIKN-SSKSKKGQDF 372
P+ +LG+C G AVY R CV TL +++ WL++A V+ EVP K++K S++++K +
Sbjct: 654 PETAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLS 713
Query: 373 EPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRL 432
EP+ +D D + LYG WQ E + P AV+G VPRNE G V ++ +P G V + L
Sbjct: 714 EPQLHDHND----LGLYGHWQTEEYQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMTL 769
Query: 433 PRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEE 492
P + VA++L ID A+ GF+F G PV DG +VC EF+D +L A+ E+ E +E
Sbjct: 770 PNLNRVARKLGIDCVQAITGFDFHGGYCHPVTDGYIVCEEFRDVLLAAWENEQAIIEKKE 829
Query: 493 KKRREAQATSRWYQLLSSIVTRQRLNNCYGNNS 525
K+++E +A W L+ ++ R+RL YG S
Sbjct: 830 KEKKEKRALGNWKLLVRGLLIRERLKLRYGAKS 862
>sp|Q01831|XPC_HUMAN DNA repair protein complementing XP-C cells OS=Homo sapiens GN=XPC
PE=1 SV=4
Length = 940
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 203/367 (55%), Gaps = 32/367 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCG-AKDVTRR 221
W EV+C E KWV VD + ++ Q + A K + Y+V G +DVT+R
Sbjct: 531 WLEVFCEQEE---KWVCVDCVHGVVG--QPLTCYKYATK-PMTYVVGIDSDGWVRDVTQR 584
Query: 222 YCMKWYRIASK-RVNSAWWDAVLAPLRELESGATGDLNVESSAKDSFVADRNSLEDMELE 280
Y W + K RV++ WW L P + S DR ED+E +
Sbjct: 585 YDPVWMTVTRKCRVDAEWWAETLRPYQ------------------SPFMDREKKEDLEFQ 626
Query: 281 TRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPK-GPILGFCSGHAVYPRSCVQTLKT 339
+ + +PLPT YKNH LY ++R L KY+ +YP+ ILG+C G AVY R CV TL +
Sbjct: 627 AKHMDQPLPTAIGLYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHS 686
Query: 340 KERWLREALQVKANEVPVKVIKN-SSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPLR 398
++ WL++A V+ EVP K++K S++++K + EP+ +E D + L+G WQ E +
Sbjct: 687 RDTWLKKARVVRLGEVPYKMVKGFSNRARKARLAEPQLREEND----LGLFGYWQTEEYQ 742
Query: 399 LPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNG 458
P AV+G VPRNE G V ++ +P G V L LP ++ VA++L+ID A+ GF+F G
Sbjct: 743 PPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRVARKLDIDCVQAITGFDFHGG 802
Query: 459 RSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLN 518
S PV DG +VC EFKD +L A+ E+ E +EK+++E +A W L ++ R+RL
Sbjct: 803 YSHPVTDGYIVCEEFKDVLLTAWENEQAVIERKEKEKKEKRALGNWKLLAKGLLIRERLK 862
Query: 519 NCYGNNS 525
YG S
Sbjct: 863 RRYGPKS 869
>sp|Q24595|XPC_DROME DNA repair protein complementing XP-C cells homolog OS=Drosophila
melanogaster GN=mus210 PE=1 SV=2
Length = 1293
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 189/372 (50%), Gaps = 36/372 (9%)
Query: 154 SRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQK-VEAAAAACKTSLRYIVAFAG 212
+RK A W EV+ E +W+ +D + G+ V+ L Y+ AF
Sbjct: 952 NRKTDASDMWVEVWSDVEE---QWICID----LFKGKLHCVDTIRKNATPGLAYVFAFQD 1004
Query: 213 CGA-KDVTRRYCMKWYRIASK-RVNSAWWDAVLAPLRELESGATGDLNVESSAKDSFVAD 270
+ KDVT RYC W K RV AW D +AP +
Sbjct: 1005 DQSLKDVTARYCASWSTTVRKARVEKAWLDETIAPYLGRRT------------------K 1046
Query: 271 RNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYP-KGPILGFCSGHAVY 329
R+ ED +L +PLP + +K+H LYV+ER L K+Q LYP P LGF G AVY
Sbjct: 1047 RDITEDDQLRRIHSDKPLPKSISEFKDHPLYVLERHLLKFQGLYPPDAPTLGFIRGEAVY 1106
Query: 330 PRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELY 389
R CV L ++E WL+ A VK E P KV+K K + +D +E++
Sbjct: 1107 SRDCVHLLHSREIWLKSARVVKLGEQPYKVVKARPKWDRLTRTVIKDQP-------LEIF 1159
Query: 390 GKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPA 449
G WQ + P+A NGIVPRN G V+++ + LP TVHLRLP + + K+L ID A A
Sbjct: 1160 GYWQTQEYEPPTAENGIVPRNAYGNVELFKDCMLPKKTVHLRLPGLMRICKKLNIDCANA 1219
Query: 450 MVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLS 509
+VGF+F G P++DG +VC EF++ + A+ E+++ + +E+++ E + W +L+
Sbjct: 1220 VVGFDFHQGACHPMYDGFIVCEEFREVVTAAWEEDQQVQVLKEQEKYETRVYGNWKKLIK 1279
Query: 510 SIVTRQRLNNCY 521
++ R+RL Y
Sbjct: 1280 GLLIRERLKKKY 1291
>sp|Q10445|RHP41_SCHPO DNA repair protein rhp41 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp41 PE=3 SV=1
Length = 638
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 171/376 (45%), Gaps = 52/376 (13%)
Query: 160 PLYWAEVYCSGENLTGKWVHVDAAN--AIIDGEQKVEAAAAACKTSLRYIVAFAGCG-AK 216
P++W E + KWV VD ++I ++ E A++ + Y+ A G K
Sbjct: 302 PVFWVEAFNKA---MQKWVCVDPFGDASVIGKYRRFEPASSDHLNQMTYVFAIEANGYVK 358
Query: 217 DVTRRYCMKWYRIASKRV-----NSAWWDAVLAPLRELESGATGDLNVESSAKDSFVADR 271
DVTR+YC+ +Y+I RV AW + + + + G D F D
Sbjct: 359 DVTRKYCLHYYKILKNRVEIFPFGKAWMNRIFSKI-----GKPRD----------FYNDM 403
Query: 272 NSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPK---GPILGFCSGHAV 328
+++ED EL +E +P N Q K+H L+V+ER L K Q + G I V
Sbjct: 404 DAIEDAELLRLEQSEGIPRNIQDLKDHPLFVLERHLKKNQAIKTGKSCGRINTKNGVELV 463
Query: 329 YPRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIEL 388
YPR V + E W R+ +K P+K +KN K + L
Sbjct: 464 YPRKYVSNGFSAEHWYRKGRIIKPGAQPLKHVKNGDKV-------------------LPL 504
Query: 389 YGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAP 448
Y + + V IVP+N G +D++ LP G H R + AK LEID A
Sbjct: 505 YDEEATQLYTPKPVVANIVPKNAYGNIDLYVPSMLPYGAYHCRKRCALAAAKFLEIDYAK 564
Query: 449 AMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEE--EEKREAEEKKRREAQATSRWYQ 506
A+VGF+F+ S P +G+VV +++ I + AEE +E++EAE + R+ W +
Sbjct: 565 AVVGFDFQRKYSKPKLEGVVVSKRYEEAI-DLIAEEIDQEEKEAEARNVRKT-CLLLWKR 622
Query: 507 LLSSIVTRQRLNNCYG 522
L++ + RQR+ YG
Sbjct: 623 LITGLRIRQRVFEEYG 638
>sp|P87235|RHP42_SCHPO DNA repair protein rhp42 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp42 PE=3 SV=1
Length = 686
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 172/387 (44%), Gaps = 47/387 (12%)
Query: 160 PLYWAEVYCSGENLTGKWVHVDAA--NAIIDGEQ---KVEAAAAACKTSLRYIVAFAG-- 212
P++W E+Y E KW+ VDA N + + + + A A K IVA
Sbjct: 323 PIFWTEIYDQSEK---KWIAVDAVVLNGVYTNDMTWFEPKGAYAESKHLRMGIVAAYDND 379
Query: 213 CGAKDVTRRYC----MKWYRIASKRVNSAWWDAVLAPLRELESGATGDLNVESSAKDSFV 268
AKDVT RY + +I ++D A +L A+D +
Sbjct: 380 LYAKDVTLRYTDYQSSRLKKIRHVSFADKYFDFYKAIFGQLAKR-------NKDAEDIY- 431
Query: 269 ADRNSLEDMELETRALTEPL--PTNQQAYKNHQLYVIERWLNKYQILYPKG-PILGFCSG 325
E+ ELE++ P+ P + +KNH +V+ R L + + L P P+ G
Sbjct: 432 ------EEKELESKV---PIREPKSFADFKNHPEFVLIRHLRREEALLPNAKPVKTATFG 482
Query: 326 HA-------VYPRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKS---KKGQDFEPE 375
+ VY R V KT E + +E +K E P K++K + + K+ +F
Sbjct: 483 NGKKATSEEVYLRKDVVICKTPENYHKEGRVIKEGEQPRKMVKARAVTISRKREHEFRVA 542
Query: 376 DYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRV 435
+ +E +G LY Q E P +GI+P+N G +D + E +P G HL +
Sbjct: 543 ETNEPVLQG---LYSSDQTELYVPPPIKDGIIPKNGYGNMDCFVESMIPKGAAHLPYRGI 599
Query: 436 YSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKR 495
+AK+L ID A A+ GFEFR R+ PV GI+V E + E + E E+ R +++ +
Sbjct: 600 AKIAKKLNIDYADAVTGFEFRKHRAIPVTTGIIVPEESAQMVYEEFLECEKIRIEKQQMK 659
Query: 496 REAQATSRWYQLLSSIVTRQRLNNCYG 522
+W LL+++ R+R+ Y
Sbjct: 660 ERKIIYGQWKHLLNALRIRKRIEEQYA 686
>sp|P14736|RAD4_YEAST DNA repair protein RAD4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD4 PE=1 SV=3
Length = 754
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 174/410 (42%), Gaps = 55/410 (13%)
Query: 157 VGAPLYWAEVYCSGENLTGKWVHVDAANAI----IDGEQKVEAAAAAC--KTSLRYIVAF 210
V P++W EV+ + + KW+ VD N + K+ AC + LRY++A+
Sbjct: 310 VKYPIFWCEVW---DKFSKKWITVDPVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAY 366
Query: 211 -AGCGAKDVTRRYCMKWY-------RIASKRVNSAWWDAVLAPLRELESGATGDLNVESS 262
G +DVTRRY +W RI W+ V+ L + D
Sbjct: 367 DRKYGCRDVTRRYA-QWMNSKVRKRRITKDDFGEKWFRKVITALHHRKRTKIDDY----- 420
Query: 263 AKDSFVADRNSLEDMELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGF 322
ED R +E +P + Q KNH YV+E+ + + QI+ P G+
Sbjct: 421 ------------EDQYFFQRDESEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGY 468
Query: 323 CSGHA-------VYPRSCVQTLKTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPE 375
H VY + + LK+ +W +K KVIK + KG E E
Sbjct: 469 LKVHGKVGKVLKVYAKRDIADLKSARQWYMNGRILKTGSRCKKVIKRTVGRPKG---EAE 525
Query: 376 DYDE-VDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPR 434
+ DE + + + ELY + PL ++ +G + +N G ++V++ +P + P
Sbjct: 526 EEDERLYSFEDTELY----IPPL---ASASGEITKNTFGNIEVFAPTMIPGNCCLVENPV 578
Query: 435 VYSVAKRLEIDSAPAMVGFEFRNGRST-PVFDGIVVCAEFKDTILEAYAEEEEKREAEEK 493
A+ L ++ APA+ F+F G + PV GIVV ++ I A E +E + +
Sbjct: 579 AIKAARFLGVEFAPAVTSFKFERGSTVKPVLSGIVVAKWLREAIETAIDGIEFIQEDDNR 638
Query: 494 KRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSS-SNFQNVKKTNSN 542
K A W LL + R +LN+ YG + + + + QN+ + N
Sbjct: 639 KEHLLGALESWNTLLLKLRIRSKLNSTYGKIAEEEPNVTKEQNIADNHDN 688
>sp|Q7F0R1|PNG1_ORYSJ Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Oryza sativa subsp. japonica GN=PNG1 PE=2 SV=1
Length = 447
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W E + NL G+W+H+D + D E L Y++A + G +DVT+RY
Sbjct: 296 WTECF---SNLYGRWMHLDPCEGVYDNPLLYEKG---WNKKLDYVIAISKDGVRDVTKRY 349
Query: 223 CMKWYRIASKRV 234
KW+ + S+R+
Sbjct: 350 TRKWHEVLSRRI 361
>sp|Q9FGY9|PNG1_ARATH Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Arabidopsis thaliana GN=PNG1 PE=2 SV=1
Length = 721
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W E Y +W+H+D + D E L Y++A + G DVT+RY
Sbjct: 280 WTECYSHS---LKRWIHLDPCEGVYDKPMLYEKG---WNKKLNYVIAISKDGVCDVTKRY 333
Query: 223 CMKWYRIASKR 233
KW+ + S+R
Sbjct: 334 TKKWHEVLSRR 344
>sp|Q8J2R3|PNG1_GIBMO Protein PNG1 OS=Gibberella moniliformis GN=PNG1 PE=3 SV=1
Length = 450
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +WVHVDA D + + A + Y +AF+ GA DVTRRY
Sbjct: 272 WTEVYSDHQK---RWVHVDACEEAWDNPRLL---AEGWGKKMSYCIAFSIDGATDVTRRY 325
Query: 223 CMK 225
K
Sbjct: 326 VRK 328
>sp|Q4IR87|PNG1_GIBZE Protein PNG1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=PNG1 PE=3 SV=1
Length = 451
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +WVHVDA D + A + Y +AF+ GA DVTRRY
Sbjct: 272 WTEVYSDHQK---RWVHVDACEEAWDNPRLY---AEGWGKKMSYCIAFSIDGATDVTRRY 325
Query: 223 CMK 225
K
Sbjct: 326 VRK 328
>sp|Q2UPS5|PNG1_ASPOR Protein png1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=png1 PE=3 SV=1
Length = 457
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W E+Y + +WVHVDA D + ++ A K S Y +AF+ GA DVTRRY
Sbjct: 290 WTEIYSEHQR---RWVHVDACEGAWD-QPRLYAEGWGRKMS--YCIAFSIDGATDVTRRY 343
>sp|Q5B6P3|PNG1_EMENI Protein PNG1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=png1 PE=3 SV=1
Length = 441
Score = 40.0 bits (92), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+HVDA D + ++ A K S Y +AF+ GA DVTRRY
Sbjct: 275 WTEVYSEHQK---RWIHVDACEETWD-QPRLYAEGWGRKIS--YCIAFSIDGATDVTRRY 328
>sp|Q4WHW1|PNG1_ASPFU Protein png1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=png1 PE=3 SV=1
Length = 455
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +WVHVDA D + L Y +AF+ GA DVTRRY
Sbjct: 288 WTEVYSEHQR---RWVHVDACEGAWD---QPRLYTEGWGRKLSYCIAFSIDGATDVTRRY 341
>sp|Q75D29|PNG1_ASHGO Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=PNG1 PE=3 SV=1
Length = 350
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY N +WVHVD+ D + + ++ Y++AF+ KDV+RRY
Sbjct: 212 WCEVY---SNALKRWVHVDSCEKSFD---EPHIYSVNWNKAMSYVIAFSNRSVKDVSRRY 265
Query: 223 CMK 225
++
Sbjct: 266 IVR 268
>sp|Q7SI01|PNG1_NEUCR Protein png-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=png-1 PE=3 SV=1
Length = 382
Score = 36.6 bits (83), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W E+Y + +WVHVD+ D + Y++AF+ GA DVTRRY
Sbjct: 207 WTEIYSEHQQ---RWVHVDSCEEAWDMPHMYYKNWG---KKMSYVIAFSREGAVDVTRRY 260
>sp|Q5XI55|NGLY1_RAT Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Rattus norvegicus GN=Ngly1 PE=2 SV=2
Length = 651
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+H DA + D E L YI+AF+ DVT RY
Sbjct: 335 WTEVYSPSQQ---RWLHCDACEDVCDKPLLYEIGWGK---KLSYIIAFSKDEVVDVTWRY 388
Query: 223 CMKWYRIASKR 233
K + S+R
Sbjct: 389 SCKHEEVMSRR 399
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 35.8 bits (81), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 41/181 (22%)
Query: 206 YIVAFAGCGAKDVTRRYCM----KWYRI-ASKRVNSAWWDAVLAPLRELESGATG----- 255
+ + GCG K C K YR+ S + + V + + +G G
Sbjct: 2010 FQIGIDGCGKKTCATLACYLTDNKLYRVPISHKCAYIEFKEVFKKVF-IHAGLKGKPTVL 2068
Query: 256 ---DLNVESSAKDSFVADRNSL----------EDMELETRALTEPLPTNQQAYKNHQLYV 302
+LN+E +DSF+ D N + E++EL++ A+ T Q + +++ +
Sbjct: 2069 MVPNLNIE---QDSFLEDLNYIISSGRIPDLFENVELDSIAMKIRYLTEQSGHMDNRQSL 2125
Query: 303 IERW-------LNKYQILYPKGPILGFCSGHAVYPR---SCVQTLKTKERWLREALQVKA 352
+ + L+ + I+ P+GP F VYP SC T+ ERW EAL + A
Sbjct: 2126 LSFFQKRIYKNLHIFVIMSPEGP--SFRQNCRVYPSMISSC--TIDWYERWPEEALLIVA 2181
Query: 353 N 353
N
Sbjct: 2182 N 2182
>sp|Q6CAX5|PNG1_YARLI Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PNG1
PE=3 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W+EVY +W+H D+ + + + Y+V F+G G DVTRRY
Sbjct: 218 WSEVYSERRK---EWIHTDSCEEAWNSPT---IYSQGWGKKMSYVVGFSGDGVTDVTRRY 271
Query: 223 CMK 225
K
Sbjct: 272 VRK 274
>sp|Q9JI78|NGLY1_MOUSE Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Mus
musculus GN=Ngly1 PE=1 SV=2
Length = 651
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+H DA + D E L YI+AF+ DVT RY
Sbjct: 335 WTEVYSPSQQ---RWLHCDACEDVCDKPLLYEIGWGK---KLSYIIAFSKDEVVDVTWRY 388
Query: 223 CMKWYRIASKR 233
K + S+R
Sbjct: 389 SCKHDEVMSRR 399
>sp|Q7KRR5|NGLY1_DROME Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Drosophila melanogaster GN=Pngl PE=1 SV=1
Length = 631
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+HVD + +ID + K + YI+A++ +DVT RY
Sbjct: 325 WTEVYSEAQ---MRWLHVDPSENVIDSPLMYQ---HGWKRHIDYILAYSRDDIQDVTWRY 378
>sp|Q4R6F3|NGLY1_MACFA Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Macaca fascicularis GN=NGLY1 PE=2 SV=1
Length = 654
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+H DA + D E L Y++AF+ DVT RY
Sbjct: 338 WTEVYSPSQQ---RWLHCDACEDVCDKPLLYEIGWGK---KLSYVIAFSKDEVVDVTWRY 391
Query: 223 CMKWYRIASKRV 234
K + ++R
Sbjct: 392 SCKHEEVIARRT 403
>sp|Q96IV0|NGLY1_HUMAN Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Homo
sapiens GN=NGLY1 PE=1 SV=1
Length = 654
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+H DA + D E L Y++AF+ DVT RY
Sbjct: 338 WTEVYSPSQQ---RWLHCDACEDVCDKPLLYEIGWGK---KLSYVIAFSKDEVVDVTWRY 391
Query: 223 CMKWYRIASKR 233
K + ++R
Sbjct: 392 SCKHEEVIARR 402
>sp|Q503I8|NGLY1_DANRE Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Danio rerio GN=ngly1 PE=2 SV=1
Length = 644
Score = 33.9 bits (76), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + +W+H D D E L YI+AF+ DVT RY
Sbjct: 323 WTEVYSQSQR---RWIHCDPCENACDKPLLYEVGWGK---KLSYILAFSKDQVADVTWRY 376
Query: 223 CMKWYRIASKR--VNSAWWDAVLAPL 246
K + S+R V W +L L
Sbjct: 377 SCKHPEVLSRRTQVQETWLLHMLNKL 402
>sp|Q5ZJM3|NGLY1_CHICK Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase
OS=Gallus gallus GN=NGLY1 PE=2 SV=1
Length = 651
Score = 32.7 bits (73), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Query: 163 WAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGAKDVTRRY 222
W EVY + + +W+H D + D E L Y++AF+ DVT RY
Sbjct: 334 WTEVYSASQK---RWLHCDPCENVCDKPLLYEIGWGK---KLSYVIAFSKDEVVDVTWRY 387
Query: 223 CMKWYRIASKRV 234
K + ++R
Sbjct: 388 SCKHQEVLTRRT 399
>sp|Q5E8M6|COABC_VIBF1 Coenzyme A biosynthesis bifunctional protein CoaBC OS=Vibrio
fischeri (strain ATCC 700601 / ES114) GN=coaBC PE=3 SV=1
Length = 409
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 423 LPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKDTILEAYA 482
L G V+L P KR++I+SA M G +N +S +F + CA D L A
Sbjct: 243 LVSGPVNLATPENV---KRIDIESAEQMHGAVMKNAQSHSIF---IACAAVADFKLSQVA 296
Query: 483 EEEEKREAEE 492
++ K+ A+E
Sbjct: 297 TQKLKKTADE 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.127 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,884,845
Number of Sequences: 539616
Number of extensions: 9472285
Number of successful extensions: 42127
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 40856
Number of HSP's gapped (non-prelim): 1204
length of query: 609
length of database: 191,569,459
effective HSP length: 123
effective length of query: 486
effective length of database: 125,196,691
effective search space: 60845591826
effective search space used: 60845591826
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)