Query 007300
Match_columns 609
No_of_seqs 289 out of 2973
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 22:17:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007300.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007300hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 1.7E-81 5.7E-86 695.8 49.1 526 83-609 8-536 (536)
2 2qzs_A Glycogen synthase; glyc 100.0 1.2E-49 4E-54 436.7 43.7 464 85-588 1-480 (485)
3 1rzu_A Glycogen synthase 1; gl 100.0 7.3E-50 2.5E-54 438.4 41.1 466 85-589 1-480 (485)
4 3fro_A GLGA glycogen synthase; 100.0 7E-47 2.4E-51 407.4 40.9 423 83-587 1-433 (439)
5 3c48_A Predicted glycosyltrans 100.0 6.1E-41 2.1E-45 362.1 39.2 402 75-590 11-431 (438)
6 2r60_A Glycosyl transferase, g 100.0 2E-40 6.8E-45 364.9 36.8 412 84-591 7-466 (499)
7 3okp_A GDP-mannose-dependent a 100.0 3.6E-40 1.2E-44 350.1 34.5 368 82-589 2-384 (394)
8 3s28_A Sucrose synthase 1; gly 100.0 3.4E-39 1.2E-43 368.8 29.6 424 84-586 278-771 (816)
9 2jjm_A Glycosyl transferase, g 100.0 3.4E-38 1.2E-42 336.2 34.9 371 84-588 13-389 (394)
10 2x6q_A Trehalose-synthase TRET 100.0 3.1E-37 1.1E-41 331.1 33.4 365 80-585 36-415 (416)
11 2iw1_A Lipopolysaccharide core 100.0 4.6E-38 1.6E-42 331.7 21.9 362 85-585 1-372 (374)
12 2iuy_A Avigt4, glycosyltransfe 100.0 1.5E-37 5.3E-42 324.7 25.5 316 82-588 1-339 (342)
13 2gek_A Phosphatidylinositol ma 100.0 4.7E-37 1.6E-41 327.7 29.6 363 83-588 19-387 (406)
14 3oy2_A Glycosyltransferase B73 100.0 7.2E-37 2.5E-41 327.8 29.0 357 85-588 1-394 (413)
15 3nb0_A Glycogen [starch] synth 100.0 5.8E-35 2E-39 319.8 29.5 343 193-587 156-636 (725)
16 2x0d_A WSAF; GT4 family, trans 100.0 7E-33 2.4E-37 297.4 16.8 358 82-585 44-410 (413)
17 2hy7_A Glucuronosyltransferase 100.0 3.3E-30 1.1E-34 276.2 20.1 204 305-587 169-382 (406)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 7.4E-29 2.5E-33 260.7 25.6 339 84-586 6-359 (364)
19 1l5w_A Maltodextrin phosphoryl 100.0 3E-28 1E-32 270.8 26.0 366 201-586 273-732 (796)
20 2c4m_A Glycogen phosphorylase; 100.0 1.3E-28 4.6E-33 273.6 21.1 472 99-586 112-721 (796)
21 1uqt_A Alpha, alpha-trehalose- 100.0 2.4E-27 8.3E-32 258.1 27.1 295 225-584 123-454 (482)
22 2vsy_A XCC0866; transferase, g 100.0 2.3E-27 8E-32 264.8 23.1 215 314-592 328-567 (568)
23 3beo_A UDP-N-acetylglucosamine 100.0 7.4E-27 2.5E-31 246.3 25.3 223 308-582 143-374 (375)
24 1vgv_A UDP-N-acetylglucosamine 99.9 8.3E-27 2.8E-31 246.9 21.5 232 312-586 139-378 (384)
25 2gj4_A Glycogen phosphorylase, 99.9 2.2E-25 7.5E-30 248.7 28.8 341 226-586 321-756 (824)
26 3t5t_A Putative glycosyltransf 99.9 8.3E-25 2.8E-29 235.9 27.8 295 226-587 150-476 (496)
27 2bfw_A GLGA glycogen synthase; 99.9 2.5E-25 8.7E-30 213.6 21.1 183 350-563 1-192 (200)
28 3qhp_A Type 1 capsular polysac 99.9 4.3E-24 1.5E-28 198.8 18.4 159 401-576 3-166 (166)
29 1v4v_A UDP-N-acetylglucosamine 99.9 8E-22 2.8E-26 208.1 31.1 219 311-586 143-366 (376)
30 2f9f_A First mannosyl transfer 99.9 7.1E-21 2.4E-25 179.5 17.2 142 398-552 21-164 (177)
31 2xci_A KDO-transferase, 3-deox 99.8 3.4E-20 1.2E-24 196.2 18.5 202 307-566 146-362 (374)
32 3rhz_A GTF3, nucleotide sugar 99.8 2E-18 6.7E-23 179.5 26.3 244 225-577 74-329 (339)
33 3ot5_A UDP-N-acetylglucosamine 99.8 9.5E-18 3.2E-22 179.0 27.7 221 313-586 168-393 (403)
34 3dzc_A UDP-N-acetylglucosamine 99.8 3.1E-18 1.1E-22 182.5 23.4 229 308-582 159-395 (396)
35 3otg_A CALG1; calicheamicin, T 99.8 1.8E-18 6E-23 184.7 18.4 159 400-583 243-409 (412)
36 3s2u_A UDP-N-acetylglucosamine 99.7 1.3E-14 4.6E-19 152.6 28.9 161 402-585 183-355 (365)
37 2iyf_A OLED, oleandomycin glyc 99.7 2.5E-15 8.6E-20 161.3 23.7 161 399-585 232-402 (430)
38 4fzr_A SSFS6; structural genom 99.7 1.3E-15 4.3E-20 162.1 16.8 152 400-579 228-397 (398)
39 3tsa_A SPNG, NDP-rhamnosyltran 99.6 1.2E-14 4E-19 154.0 16.2 157 401-582 220-388 (391)
40 3ia7_A CALG4; glycosysltransfe 99.6 1.4E-13 4.8E-18 145.8 23.5 156 400-583 232-399 (402)
41 3oti_A CALG3; calicheamicin, T 99.6 1.5E-13 5.2E-18 145.9 20.6 153 400-581 233-396 (398)
42 2p6p_A Glycosyl transferase; X 99.5 4.7E-12 1.6E-16 133.6 24.7 153 400-581 211-378 (384)
43 3rsc_A CALG2; TDP, enediyne, s 99.5 3.2E-12 1.1E-16 136.3 23.1 156 400-583 248-414 (415)
44 4hwg_A UDP-N-acetylglucosamine 99.5 3.1E-13 1.1E-17 143.0 14.7 190 313-550 145-342 (385)
45 2yjn_A ERYCIII, glycosyltransf 99.3 1.3E-10 4.5E-15 125.0 19.9 153 401-581 269-434 (441)
46 2iya_A OLEI, oleandomycin glyc 99.2 3.4E-09 1.2E-13 113.2 25.6 156 400-581 256-420 (424)
47 1ygp_A Yeast glycogen phosphor 99.1 5.9E-09 2E-13 116.1 24.1 220 304-525 467-762 (879)
48 4amg_A Snogd; transferase, pol 99.0 2.3E-09 8E-14 113.2 15.5 153 401-579 239-397 (400)
49 3h4t_A Glycosyltransferase GTF 98.9 2.8E-08 9.4E-13 105.6 19.6 157 400-587 222-383 (404)
50 3q3e_A HMW1C-like glycosyltran 98.9 1.2E-08 4.1E-13 111.8 14.7 177 390-586 431-625 (631)
51 2o6l_A UDP-glucuronosyltransfe 98.8 4.5E-08 1.5E-12 90.7 12.1 122 400-550 22-154 (170)
52 1rrv_A Glycosyltransferase GTF 98.7 1.3E-06 4.4E-11 92.9 23.9 155 400-586 238-401 (416)
53 1iir_A Glycosyltransferase GTF 98.1 1.1E-05 3.8E-10 85.6 12.6 155 400-587 239-401 (415)
54 4gyw_A UDP-N-acetylglucosamine 97.6 0.0028 9.6E-08 72.0 20.3 182 389-587 514-708 (723)
55 3tov_A Glycosyl transferase fa 97.0 0.061 2.1E-06 55.3 21.5 111 388-506 175-288 (349)
56 1psw_A ADP-heptose LPS heptosy 96.3 0.032 1.1E-06 57.0 12.7 113 385-505 167-287 (348)
57 3hbf_A Flavonoid 3-O-glucosylt 95.7 0.092 3.2E-06 56.0 13.2 134 401-550 275-414 (454)
58 3hbm_A UDP-sugar hydrolase; PS 95.5 0.062 2.1E-06 53.5 10.3 94 401-506 159-252 (282)
59 3l7i_A Teichoic acid biosynthe 95.1 0.22 7.4E-06 56.5 14.8 234 311-586 475-719 (729)
60 2pq6_A UDP-glucuronosyl/UDP-gl 94.9 0.19 6.4E-06 54.0 12.8 131 401-550 297-439 (482)
61 2vch_A Hydroquinone glucosyltr 94.6 0.43 1.5E-05 51.1 14.9 138 401-549 270-428 (480)
62 2c1x_A UDP-glucose flavonoid 3 94.5 0.4 1.4E-05 51.0 14.1 131 401-550 273-412 (456)
63 2acv_A Triterpene UDP-glucosyl 92.0 3 0.0001 44.2 16.0 135 401-549 278-424 (463)
64 2gt1_A Lipopolysaccharide hept 87.9 2.5 8.7E-05 42.2 10.6 139 401-550 180-322 (326)
65 2jzc_A UDP-N-acetylglucosamine 85.6 0.92 3.2E-05 43.2 5.4 38 466-507 123-161 (224)
66 4g65_A TRK system potassium up 85.5 7.8 0.00027 41.0 13.2 111 402-515 211-344 (461)
67 4gi5_A Quinone reductase; prot 76.6 2.4 8.4E-05 41.7 4.9 45 80-127 18-62 (280)
68 2d1p_A TUSD, hypothetical UPF0 75.5 3.3 0.00011 36.3 4.9 41 84-127 12-53 (140)
69 2hy5_A Putative sulfurtransfer 74.6 3.5 0.00012 35.3 4.9 40 85-127 1-41 (130)
70 1iir_A Glycosyltransferase GTF 73.7 2.3 8E-05 44.1 4.2 38 85-128 1-38 (415)
71 4b4o_A Epimerase family protei 72.9 2.2 7.4E-05 42.0 3.6 27 101-127 7-33 (298)
72 3grc_A Sensor protein, kinase; 72.7 40 0.0014 27.9 12.0 110 429-551 6-128 (140)
73 1rcu_A Conserved hypothetical 71.0 43 0.0015 30.8 11.7 129 413-547 42-192 (195)
74 3e8x_A Putative NAD-dependent 66.6 3.9 0.00013 38.5 3.7 39 79-127 16-54 (236)
75 3ty2_A 5'-nucleotidase SURE; s 62.7 5.3 0.00018 38.7 3.8 41 82-130 9-49 (261)
76 1hdo_A Biliverdin IX beta redu 62.1 6.4 0.00022 35.8 4.2 36 82-127 1-36 (206)
77 3jte_A Response regulator rece 61.6 68 0.0023 26.5 12.5 108 430-550 4-123 (143)
78 2zay_A Response regulator rece 61.1 57 0.0019 27.2 10.1 109 429-550 8-128 (147)
79 2pq6_A UDP-glucuronosyl/UDP-gl 60.9 6.8 0.00023 41.6 4.7 41 82-128 6-46 (482)
80 3bq9_A Predicted rossmann fold 60.2 65 0.0022 33.6 11.5 136 399-550 144-332 (460)
81 3kht_A Response regulator; PSI 59.9 73 0.0025 26.4 12.8 111 429-550 5-128 (144)
82 2hy5_B Intracellular sulfur ox 59.8 8.4 0.00029 33.4 4.2 41 84-127 4-45 (136)
83 4f3y_A DHPR, dihydrodipicolina 59.6 10 0.00035 37.1 5.3 45 467-511 66-110 (272)
84 3mc3_A DSRE/DSRF-like family p 58.9 11 0.00038 32.3 4.9 41 84-127 15-55 (134)
85 3cg4_A Response regulator rece 58.5 76 0.0026 26.1 11.3 110 428-550 6-127 (142)
86 3heb_A Response regulator rece 57.3 85 0.0029 26.3 11.7 111 429-550 4-135 (152)
87 3hzh_A Chemotaxis response reg 56.9 85 0.0029 26.6 10.7 108 430-549 37-156 (157)
88 1jx7_A Hypothetical protein YC 55.4 11 0.00038 31.1 4.2 40 85-127 2-43 (117)
89 1k68_A Phytochrome response re 54.6 85 0.0029 25.5 12.6 110 430-550 3-131 (140)
90 3kb6_A D-lactate dehydrogenase 54.1 24 0.00083 35.4 7.2 44 468-511 188-236 (334)
91 2pln_A HP1043, response regula 53.6 82 0.0028 25.8 9.7 106 429-550 18-133 (137)
92 1wcv_1 SOJ, segregation protei 53.1 9.7 0.00033 36.5 3.9 39 83-127 4-44 (257)
93 4e7p_A Response regulator; DNA 52.8 1E+02 0.0034 25.8 12.2 111 429-550 20-140 (150)
94 2d1p_B TUSC, hypothetical UPF0 52.2 15 0.0005 30.9 4.4 39 86-127 3-41 (119)
95 3ew7_A LMO0794 protein; Q8Y8U8 52.1 9.7 0.00033 35.0 3.6 33 85-127 1-33 (221)
96 3t6k_A Response regulator rece 52.1 98 0.0033 25.4 11.2 108 430-550 5-124 (136)
97 3kcn_A Adenylate cyclase homol 52.1 1E+02 0.0036 25.7 13.3 108 429-550 4-123 (151)
98 3n53_A Response regulator rece 51.5 1E+02 0.0034 25.3 11.2 107 430-550 4-122 (140)
99 3h2s_A Putative NADH-flavin re 51.0 10 0.00035 35.0 3.6 33 85-127 1-33 (224)
100 3f6c_A Positive transcription 50.8 98 0.0033 25.0 10.7 109 430-550 2-120 (134)
101 3hdv_A Response regulator; PSI 50.7 1E+02 0.0034 25.1 11.3 109 429-550 7-127 (136)
102 3hdg_A Uncharacterized protein 50.6 1E+02 0.0034 25.1 11.5 109 429-550 7-125 (137)
103 2vch_A Hydroquinone glucosyltr 50.5 10 0.00035 40.2 3.9 40 83-128 5-45 (480)
104 4hb9_A Similarities with proba 50.5 9.4 0.00032 38.8 3.5 30 84-124 1-30 (412)
105 3ijp_A DHPR, dihydrodipicolina 49.8 17 0.00056 35.9 4.9 43 468-510 82-124 (288)
106 3hly_A Flavodoxin-like domain; 48.7 16 0.00054 32.3 4.3 38 85-127 1-38 (161)
107 3mcu_A Dipicolinate synthase, 48.3 17 0.00058 33.9 4.5 38 82-127 3-42 (207)
108 1lss_A TRK system potassium up 48.3 18 0.00063 30.3 4.6 34 83-127 3-36 (140)
109 2e6c_A 5'-nucleotidase SURE; S 48.3 12 0.00042 35.8 3.7 38 85-130 1-38 (244)
110 3dhn_A NAD-dependent epimerase 47.6 13 0.00044 34.4 3.7 33 85-127 5-37 (227)
111 2phj_A 5'-nucleotidase SURE; S 47.2 13 0.00045 35.7 3.6 38 85-130 2-39 (251)
112 1j9j_A Stationary phase surviV 46.5 14 0.00046 35.6 3.6 38 85-130 1-38 (247)
113 3cnb_A DNA-binding response re 46.5 1.2E+02 0.004 24.7 11.9 111 429-551 8-131 (143)
114 3h1g_A Chemotaxis protein CHEY 46.2 1.2E+02 0.004 24.6 12.3 110 429-550 5-127 (129)
115 3to5_A CHEY homolog; alpha(5)b 46.1 1.4E+02 0.0046 25.3 10.4 111 427-549 10-132 (134)
116 3dqp_A Oxidoreductase YLBE; al 45.6 13 0.00043 34.4 3.3 33 85-127 1-33 (219)
117 3f6r_A Flavodoxin; FMN binding 45.3 23 0.00079 30.4 4.8 38 85-127 2-39 (148)
118 2qsj_A DNA-binding response re 44.7 1.4E+02 0.0047 24.9 11.3 111 429-550 3-124 (154)
119 1i3c_A Response regulator RCP1 44.5 1.4E+02 0.0047 24.9 12.7 111 429-550 8-137 (149)
120 2pzm_A Putative nucleotide sug 44.4 14 0.00049 36.5 3.7 42 76-127 12-53 (330)
121 4dad_A Putative pilus assembly 44.4 72 0.0025 26.5 7.9 68 473-550 66-141 (146)
122 1l5x_A SurviVal protein E; str 44.2 15 0.00051 36.0 3.6 38 85-130 1-38 (280)
123 3lqk_A Dipicolinate synthase s 44.1 18 0.00062 33.5 4.0 39 82-128 5-45 (201)
124 3of5_A Dethiobiotin synthetase 44.1 24 0.00081 33.3 5.0 40 83-126 2-41 (228)
125 1k66_A Phytochrome response re 44.1 1.3E+02 0.0045 24.6 11.8 109 429-550 6-138 (149)
126 3gpi_A NAD-dependent epimerase 43.6 17 0.00057 35.1 4.0 35 82-127 1-35 (286)
127 2iz6_A Molybdenum cofactor car 42.9 58 0.002 29.3 7.1 136 401-550 14-174 (176)
128 2v4n_A Multifunctional protein 42.7 17 0.0006 35.0 3.8 39 84-130 1-39 (254)
129 3ilh_A Two component response 42.5 1.4E+02 0.0047 24.4 12.6 111 429-550 9-139 (146)
130 2j48_A Two-component sensor ki 42.2 1.1E+02 0.0039 23.5 8.5 105 431-548 3-116 (119)
131 2qr3_A Two-component system re 42.2 1.3E+02 0.0043 24.5 9.1 108 430-550 4-126 (140)
132 2qzj_A Two-component response 42.2 1.4E+02 0.0048 24.4 9.4 109 429-550 4-121 (136)
133 1cp2_A CP2, nitrogenase iron p 42.1 17 0.00057 34.9 3.6 36 85-127 1-38 (269)
134 3nhm_A Response regulator; pro 42.1 1.3E+02 0.0046 24.1 11.9 107 430-550 5-122 (133)
135 3hv2_A Response regulator/HD d 41.6 1.5E+02 0.0052 24.6 11.4 109 429-550 14-133 (153)
136 1mb3_A Cell division response 41.1 1.3E+02 0.0045 23.7 10.7 107 431-550 3-121 (124)
137 3gt7_A Sensor protein; structu 41.1 1.6E+02 0.0054 24.7 12.4 109 429-550 7-127 (154)
138 1f4p_A Flavodoxin; electron tr 41.1 24 0.00082 30.2 4.2 38 85-127 1-38 (147)
139 3ghy_A Ketopantoate reductase 40.6 20 0.00068 35.9 4.0 35 82-127 1-35 (335)
140 3h5i_A Response regulator/sens 40.5 1.5E+02 0.0051 24.2 14.6 109 429-550 5-124 (140)
141 1kjn_A MTH0777; hypotethical p 40.5 36 0.0012 29.8 4.9 39 82-126 4-44 (157)
142 3fgn_A Dethiobiotin synthetase 40.4 33 0.0011 32.9 5.4 41 82-126 23-63 (251)
143 3i6i_A Putative leucoanthocyan 39.8 17 0.0006 36.2 3.5 36 82-127 8-43 (346)
144 2ph1_A Nucleotide-binding prot 39.8 19 0.00065 34.5 3.6 38 85-128 18-57 (262)
145 3tem_A Ribosyldihydronicotinam 39.8 24 0.00084 33.2 4.3 41 84-127 1-41 (228)
146 2z1m_A GDP-D-mannose dehydrata 39.8 17 0.00059 35.9 3.4 36 82-127 1-36 (345)
147 3kjh_A CO dehydrogenase/acetyl 39.6 18 0.00063 33.8 3.5 38 85-128 1-38 (254)
148 3eul_A Possible nitrate/nitrit 39.5 1.6E+02 0.0056 24.4 12.2 111 429-550 15-135 (152)
149 4b4t_W RPN10, 26S proteasome r 39.1 39 0.0013 32.8 5.6 52 400-452 108-160 (268)
150 3auf_A Glycinamide ribonucleot 39.1 74 0.0025 30.0 7.5 34 85-127 23-58 (229)
151 1bg6_A N-(1-D-carboxylethyl)-L 39.1 24 0.00083 35.3 4.4 35 82-127 2-36 (359)
152 1bvy_F Protein (cytochrome P45 38.9 24 0.00081 32.3 3.9 39 84-127 21-59 (191)
153 3cfy_A Putative LUXO repressor 38.6 1.6E+02 0.0055 24.0 10.4 107 431-550 6-122 (137)
154 2a5l_A Trp repressor binding p 37.6 34 0.0012 30.9 4.8 38 85-127 6-43 (200)
155 1dbw_A Transcriptional regulat 37.0 1.6E+02 0.0054 23.5 12.5 109 429-550 3-121 (126)
156 4dzz_A Plasmid partitioning pr 36.9 28 0.00094 31.5 4.1 37 85-127 1-39 (206)
157 3nbm_A PTS system, lactose-spe 36.7 40 0.0014 27.7 4.6 45 82-132 4-48 (108)
158 1p9l_A Dihydrodipicolinate red 36.4 93 0.0032 29.6 7.8 78 431-511 2-82 (245)
159 3m6m_D Sensory/regulatory prot 36.4 1.8E+02 0.0062 24.0 10.7 109 429-550 14-136 (143)
160 3lte_A Response regulator; str 36.3 1.6E+02 0.0056 23.5 11.0 109 429-550 6-125 (132)
161 2ixd_A LMBE-related protein; h 36.2 34 0.0012 32.6 4.7 42 82-129 1-42 (242)
162 1id1_A Putative potassium chan 35.9 32 0.0011 29.7 4.2 35 82-127 1-35 (153)
163 3k9g_A PF-32 protein; ssgcid, 35.8 19 0.00063 34.5 2.8 38 83-127 25-64 (267)
164 2dkn_A 3-alpha-hydroxysteroid 35.8 26 0.00088 32.8 3.8 34 85-127 1-34 (255)
165 1e6u_A GDP-fucose synthetase; 35.4 17 0.00059 35.6 2.6 35 82-126 1-35 (321)
166 3kht_A Response regulator; PSI 35.4 1.8E+02 0.0063 23.7 9.2 35 82-126 3-37 (144)
167 3lua_A Response regulator rece 35.3 1.8E+02 0.0061 23.7 8.9 109 429-550 4-127 (140)
168 1fjh_A 3alpha-hydroxysteroid d 35.0 28 0.00095 32.9 3.9 34 85-127 1-34 (257)
169 1ys7_A Transcriptional regulat 34.7 2.5E+02 0.0087 25.2 12.8 109 429-550 7-125 (233)
170 3i83_A 2-dehydropantoate 2-red 34.5 30 0.001 34.3 4.2 33 84-127 2-34 (320)
171 3gl9_A Response regulator; bet 33.8 1.8E+02 0.0061 23.1 12.3 106 431-549 4-121 (122)
172 3ruf_A WBGU; rossmann fold, UD 33.7 24 0.00081 35.1 3.3 36 82-127 23-58 (351)
173 2b69_A UDP-glucuronate decarbo 33.7 27 0.00091 34.7 3.7 36 82-127 25-60 (343)
174 3rp8_A Flavoprotein monooxygen 33.5 25 0.00086 35.9 3.5 37 80-127 19-55 (407)
175 3ego_A Probable 2-dehydropanto 33.4 30 0.001 34.1 3.9 32 84-127 2-33 (307)
176 4id9_A Short-chain dehydrogena 33.1 23 0.00079 35.1 3.1 37 81-127 16-52 (347)
177 3slg_A PBGP3 protein; structur 32.9 22 0.00074 35.8 2.9 39 80-128 20-59 (372)
178 1ydg_A Trp repressor binding p 32.8 47 0.0016 30.4 5.0 39 84-127 6-44 (211)
179 4hs4_A Chromate reductase; tri 32.7 20 0.00069 33.0 2.4 41 81-125 3-44 (199)
180 3f6p_A Transcriptional regulat 32.7 1.8E+02 0.0063 22.9 9.6 106 431-549 4-118 (120)
181 4ds3_A Phosphoribosylglycinami 32.7 76 0.0026 29.5 6.3 37 82-127 5-43 (209)
182 3gd5_A Otcase, ornithine carba 32.3 1.4E+02 0.0046 29.8 8.5 84 387-483 147-234 (323)
183 2qxy_A Response regulator; reg 32.2 1.7E+02 0.0058 23.8 8.3 108 429-550 4-121 (142)
184 2hun_A 336AA long hypothetical 32.2 24 0.00081 34.8 3.0 35 82-126 1-37 (336)
185 2ywr_A Phosphoribosylglycinami 32.2 72 0.0025 29.7 6.2 34 85-127 2-37 (216)
186 3qjg_A Epidermin biosynthesis 32.2 40 0.0014 30.4 4.1 36 84-127 5-41 (175)
187 3cg0_A Response regulator rece 32.1 2E+02 0.0068 23.2 11.1 110 429-550 9-128 (140)
188 3ug7_A Arsenical pump-driving 32.1 35 0.0012 34.4 4.3 39 84-128 24-64 (349)
189 2bka_A CC3, TAT-interacting pr 31.9 25 0.00086 32.7 3.0 36 82-127 16-53 (242)
190 3guy_A Short-chain dehydrogena 31.9 26 0.0009 32.5 3.1 34 85-127 1-34 (230)
191 2pi1_A D-lactate dehydrogenase 31.8 1.2E+02 0.0043 30.1 8.3 44 468-511 188-236 (334)
192 3k96_A Glycerol-3-phosphate de 31.8 35 0.0012 34.6 4.2 35 82-127 27-61 (356)
193 1ybx_A Conserved hypothetical 31.5 1E+02 0.0034 26.8 6.4 51 498-550 66-116 (143)
194 2bi7_A UDP-galactopyranose mut 31.5 29 0.001 35.4 3.6 35 82-127 1-35 (384)
195 3r0j_A Possible two component 31.3 3.1E+02 0.011 25.1 11.8 109 429-550 23-141 (250)
196 2rjn_A Response regulator rece 31.2 2.3E+02 0.0077 23.5 10.8 109 429-550 7-126 (154)
197 1cyd_A Carbonyl reductase; sho 31.2 39 0.0013 31.4 4.2 36 82-127 5-40 (244)
198 2vo1_A CTP synthase 1; pyrimid 31.2 54 0.0018 31.8 5.0 44 81-127 19-62 (295)
199 2gk4_A Conserved hypothetical 31.1 33 0.0011 32.5 3.6 25 100-127 28-52 (232)
200 3tqr_A Phosphoribosylglycinami 31.0 1E+02 0.0035 28.7 6.9 36 83-127 4-40 (215)
201 3g17_A Similar to 2-dehydropan 31.0 21 0.00073 34.9 2.4 33 84-127 2-34 (294)
202 3pp8_A Glyoxylate/hydroxypyruv 31.0 74 0.0025 31.5 6.4 46 466-511 185-235 (315)
203 2x4g_A Nucleoside-diphosphate- 30.9 33 0.0011 33.8 3.8 34 84-127 13-46 (342)
204 2yq5_A D-isomer specific 2-hyd 30.8 1.3E+02 0.0043 30.2 8.1 44 468-511 194-242 (343)
205 1jbe_A Chemotaxis protein CHEY 30.7 2E+02 0.0069 22.8 10.8 110 429-550 4-125 (128)
206 3pg5_A Uncharacterized protein 30.4 31 0.0011 34.9 3.5 37 85-127 1-39 (361)
207 3m2p_A UDP-N-acetylglucosamine 29.9 34 0.0012 33.3 3.7 34 84-127 2-35 (311)
208 2ew2_A 2-dehydropantoate 2-red 29.8 36 0.0012 33.1 3.8 33 84-127 3-35 (316)
209 3eag_A UDP-N-acetylmuramate:L- 29.8 39 0.0013 33.6 4.1 33 84-126 4-36 (326)
210 1rkx_A CDP-glucose-4,6-dehydra 29.8 30 0.001 34.4 3.3 36 82-127 7-42 (357)
211 3hn2_A 2-dehydropantoate 2-red 29.7 34 0.0012 33.7 3.6 33 84-127 2-34 (312)
212 2zki_A 199AA long hypothetical 29.7 44 0.0015 30.2 4.2 37 85-127 5-41 (199)
213 4e3z_A Putative oxidoreductase 29.6 34 0.0012 32.7 3.5 37 82-127 23-59 (272)
214 1qkk_A DCTD, C4-dicarboxylate 29.6 2.4E+02 0.0082 23.3 12.8 109 429-550 3-121 (155)
215 3enk_A UDP-glucose 4-epimerase 29.3 39 0.0013 33.3 4.0 34 84-127 5-38 (341)
216 3ea0_A ATPase, para family; al 29.1 45 0.0015 31.0 4.3 38 84-127 3-43 (245)
217 3b6i_A Flavoprotein WRBA; flav 29.0 53 0.0018 29.5 4.6 38 85-127 2-40 (198)
218 2afh_E Nitrogenase iron protei 28.8 51 0.0017 31.8 4.7 39 84-127 1-39 (289)
219 2i6u_A Otcase, ornithine carba 28.7 2.6E+02 0.009 27.4 9.8 85 387-483 138-226 (307)
220 4egb_A DTDP-glucose 4,6-dehydr 28.7 25 0.00087 34.8 2.5 37 80-126 20-56 (346)
221 1fy2_A Aspartyl dipeptidase; s 28.7 1.3E+02 0.0045 28.1 7.4 105 402-508 3-123 (229)
222 3bfv_A CAPA1, CAPB2, membrane 28.7 54 0.0018 31.6 4.8 41 83-127 80-120 (271)
223 1rpn_A GDP-mannose 4,6-dehydra 28.7 35 0.0012 33.5 3.6 35 83-127 13-47 (335)
224 1e2b_A Enzyme IIB-cellobiose; 28.3 71 0.0024 26.0 4.8 45 82-132 1-45 (106)
225 1kgs_A DRRD, DNA binding respo 28.2 3.2E+02 0.011 24.3 11.7 108 430-550 3-120 (225)
226 3en0_A Cyanophycinase; serine 28.2 2.1E+02 0.007 27.9 8.9 107 402-508 28-155 (291)
227 2ehd_A Oxidoreductase, oxidore 28.1 37 0.0013 31.5 3.4 25 100-127 14-38 (234)
228 2q62_A ARSH; alpha/beta, flavo 28.1 55 0.0019 31.2 4.6 43 82-127 32-74 (247)
229 3sbx_A Putative uncharacterize 28.0 3.2E+02 0.011 24.7 9.6 139 394-545 8-188 (189)
230 1p9o_A Phosphopantothenoylcyst 28.0 44 0.0015 33.2 4.0 21 107-127 68-88 (313)
231 2r85_A PURP protein PF1517; AT 27.9 35 0.0012 33.6 3.4 32 84-127 2-33 (334)
232 3oet_A Erythronate-4-phosphate 27.9 1.7E+02 0.0057 29.8 8.5 81 429-511 119-216 (381)
233 1o5i_A 3-oxoacyl-(acyl carrier 27.8 51 0.0017 31.0 4.4 25 100-127 28-52 (249)
234 3cu5_A Two component transcrip 27.7 2.5E+02 0.0085 22.9 11.6 108 431-550 4-123 (141)
235 2ydy_A Methionine adenosyltran 27.6 35 0.0012 33.2 3.3 33 84-126 2-34 (315)
236 3kyj_B CHEY6 protein, putative 27.6 2.5E+02 0.0086 22.9 9.1 92 429-522 13-117 (145)
237 1z82_A Glycerol-3-phosphate de 27.5 43 0.0015 33.3 4.0 34 83-127 13-46 (335)
238 1ks9_A KPA reductase;, 2-dehyd 27.4 45 0.0015 32.0 4.0 32 85-127 1-32 (291)
239 2r6j_A Eugenol synthase 1; phe 27.3 34 0.0012 33.5 3.1 32 86-127 13-44 (318)
240 1oc2_A DTDP-glucose 4,6-dehydr 27.3 34 0.0012 33.8 3.2 25 100-127 13-39 (348)
241 3l77_A Short-chain alcohol deh 27.2 44 0.0015 31.0 3.8 34 85-127 2-35 (235)
242 3kto_A Response regulator rece 27.2 1E+02 0.0034 25.3 5.8 109 430-551 7-127 (136)
243 1ooe_A Dihydropteridine reduct 27.1 38 0.0013 31.5 3.3 25 100-127 12-36 (236)
244 2vvp_A Ribose-5-phosphate isom 27.1 46 0.0016 29.6 3.5 38 82-127 1-38 (162)
245 3oh8_A Nucleoside-diphosphate 27.0 40 0.0014 35.9 3.8 34 84-127 147-180 (516)
246 1xg5_A ARPG836; short chain de 26.9 54 0.0018 31.4 4.5 25 100-127 41-65 (279)
247 2gdz_A NAD+-dependent 15-hydro 26.9 50 0.0017 31.4 4.2 33 86-127 8-40 (267)
248 3ko8_A NAD-dependent epimerase 26.9 37 0.0013 32.9 3.3 33 85-127 1-33 (312)
249 1p6q_A CHEY2; chemotaxis, sign 26.6 2.4E+02 0.0082 22.3 9.9 109 429-549 6-126 (129)
250 3qxc_A Dethiobiotin synthetase 26.6 66 0.0023 30.5 4.9 39 84-126 20-58 (242)
251 1oth_A Protein (ornithine tran 26.5 3.5E+02 0.012 26.7 10.4 127 312-482 99-231 (321)
252 1p2f_A Response regulator; DRR 26.4 3.1E+02 0.01 24.4 9.6 106 431-550 4-117 (220)
253 2gwr_A DNA-binding response re 26.4 3.6E+02 0.012 24.4 11.5 108 430-550 6-122 (238)
254 1dhr_A Dihydropteridine reduct 26.2 49 0.0017 30.9 3.9 35 84-127 6-40 (241)
255 2acv_A Triterpene UDP-glucosyl 26.2 33 0.0011 36.0 2.9 39 84-128 9-49 (463)
256 1jkx_A GART;, phosphoribosylgl 26.2 1.7E+02 0.0058 27.0 7.6 34 85-127 1-36 (212)
257 3sxp_A ADP-L-glycero-D-mannohe 26.0 45 0.0016 33.2 3.9 36 82-127 8-45 (362)
258 2pk3_A GDP-6-deoxy-D-LYXO-4-he 26.0 45 0.0016 32.4 3.8 25 100-127 21-45 (321)
259 2oqr_A Sensory transduction pr 25.9 3E+02 0.01 24.6 9.5 108 430-550 5-121 (230)
260 3dff_A Teicoplanin pseudoaglyc 25.9 68 0.0023 31.1 4.9 40 84-129 7-46 (273)
261 3av3_A Phosphoribosylglycinami 25.9 1.8E+02 0.006 26.9 7.6 34 85-127 4-39 (212)
262 3qvl_A Putative hydantoin race 25.9 2.2E+02 0.0076 26.8 8.6 40 84-128 1-40 (245)
263 1j4a_A D-LDH, D-lactate dehydr 25.8 1.4E+02 0.0048 29.6 7.5 44 468-511 193-241 (333)
264 3fni_A Putative diflavin flavo 25.8 80 0.0027 27.6 5.0 39 84-127 4-42 (159)
265 1dxy_A D-2-hydroxyisocaproate 25.6 1.4E+02 0.0046 29.8 7.3 44 468-511 191-239 (333)
266 1qyc_A Phenylcoumaran benzylic 25.6 32 0.0011 33.4 2.5 33 85-127 5-37 (308)
267 3rqi_A Response regulator prot 25.5 3.3E+02 0.011 23.5 10.1 109 429-550 7-125 (184)
268 3b2n_A Uncharacterized protein 25.5 2.6E+02 0.0089 22.4 12.4 109 430-550 4-123 (133)
269 1duv_G Octase-1, ornithine tra 25.3 2.5E+02 0.0085 28.0 9.0 86 387-483 143-233 (333)
270 4dio_A NAD(P) transhydrogenase 25.2 2.8E+02 0.0097 28.4 9.7 48 467-514 268-323 (405)
271 3uuw_A Putative oxidoreductase 25.1 1.5E+02 0.0051 28.7 7.5 91 401-505 7-97 (308)
272 3dfi_A Pseudoaglycone deacetyl 25.0 78 0.0027 30.5 5.2 41 83-129 6-46 (270)
273 2qyt_A 2-dehydropantoate 2-red 24.8 43 0.0015 32.7 3.3 32 84-126 8-45 (317)
274 3luf_A Two-component system re 24.7 4.3E+02 0.015 24.6 14.0 110 428-550 123-245 (259)
275 3qvo_A NMRA family protein; st 24.6 70 0.0024 29.6 4.7 35 85-128 23-58 (236)
276 2woj_A ATPase GET3; tail-ancho 24.5 50 0.0017 33.3 3.8 41 83-128 16-58 (354)
277 3zqu_A Probable aromatic acid 24.3 74 0.0025 29.5 4.6 36 84-127 4-40 (209)
278 3r6d_A NAD-dependent epimerase 24.3 56 0.0019 29.8 3.9 25 100-127 14-39 (221)
279 2jba_A Phosphate regulon trans 24.3 2.6E+02 0.0088 21.9 8.9 107 431-550 4-122 (127)
280 2i87_A D-alanine-D-alanine lig 24.2 36 0.0012 34.3 2.7 44 82-127 1-44 (364)
281 3kkj_A Amine oxidase, flavin-c 24.1 44 0.0015 30.6 3.1 30 85-125 3-32 (336)
282 4e21_A 6-phosphogluconate dehy 24.1 46 0.0016 33.7 3.4 35 82-127 20-54 (358)
283 3q9l_A Septum site-determining 24.0 67 0.0023 30.1 4.5 38 85-128 2-41 (260)
284 2rdm_A Response regulator rece 23.9 2.7E+02 0.0092 22.0 13.0 110 429-551 5-124 (132)
285 3q9s_A DNA-binding response re 23.9 3.2E+02 0.011 25.2 9.4 108 429-549 37-153 (249)
286 1wma_A Carbonyl reductase [NAD 23.9 47 0.0016 31.4 3.3 35 84-127 3-38 (276)
287 2q7x_A UPF0052 protein SP_1565 23.8 62 0.0021 32.3 4.2 37 82-129 2-38 (326)
288 2o4c_A Erythronate-4-phosphate 23.8 1.9E+02 0.0067 29.3 8.1 81 429-511 116-213 (380)
289 1evy_A Glycerol-3-phosphate de 23.7 38 0.0013 34.2 2.7 33 84-127 14-47 (366)
290 4dgk_A Phytoene dehydrogenase; 23.7 38 0.0013 35.6 2.8 30 86-126 3-32 (501)
291 3rd5_A Mypaa.01249.C; ssgcid, 23.7 79 0.0027 30.4 5.0 37 81-127 13-49 (291)
292 3cio_A ETK, tyrosine-protein k 23.7 75 0.0026 31.1 4.8 41 83-127 102-142 (299)
293 4dgs_A Dehydrogenase; structur 23.6 1.8E+02 0.006 29.1 7.6 81 429-511 171-264 (340)
294 3sju_A Keto reductase; short-c 23.6 56 0.0019 31.4 3.8 37 82-127 21-57 (279)
295 1ek6_A UDP-galactose 4-epimera 23.6 51 0.0017 32.5 3.7 34 84-127 2-35 (348)
296 4huj_A Uncharacterized protein 23.6 60 0.0021 30.0 3.9 34 82-126 21-54 (220)
297 2vzf_A NADH-dependent FMN redu 23.5 68 0.0023 29.0 4.2 40 85-127 3-43 (197)
298 3ba1_A HPPR, hydroxyphenylpyru 23.5 1.1E+02 0.0039 30.4 6.2 43 468-510 209-256 (333)
299 1geq_A Tryptophan synthase alp 23.5 3.9E+02 0.013 24.6 9.9 121 400-523 81-220 (248)
300 1xdw_A NAD+-dependent (R)-2-hy 23.5 1.3E+02 0.0045 29.8 6.7 44 468-511 192-240 (331)
301 2pl1_A Transcriptional regulat 23.4 2.6E+02 0.0089 21.7 11.9 107 431-550 2-118 (121)
302 3d7l_A LIN1944 protein; APC893 23.4 59 0.002 29.1 3.8 33 84-127 3-35 (202)
303 3l6e_A Oxidoreductase, short-c 23.4 60 0.002 30.3 3.9 34 85-127 3-36 (235)
304 3zq6_A Putative arsenical pump 23.3 83 0.0028 31.1 5.2 39 84-128 12-52 (324)
305 1wwk_A Phosphoglycerate dehydr 23.3 2.4E+02 0.0082 27.5 8.5 44 468-511 190-238 (307)
306 2x6t_A ADP-L-glycero-D-manno-h 23.3 44 0.0015 33.3 3.1 36 82-127 44-80 (357)
307 1iow_A DD-ligase, DDLB, D-ALA\ 23.3 45 0.0015 32.3 3.1 39 84-127 2-43 (306)
308 1qyd_A Pinoresinol-lariciresin 23.3 38 0.0013 32.9 2.6 34 84-127 4-37 (313)
309 1zmt_A Haloalcohol dehalogenas 23.2 31 0.0011 32.7 1.8 34 85-127 1-34 (254)
310 3gvx_A Glycerate dehydrogenase 23.2 1.2E+02 0.004 29.6 6.1 81 429-511 122-215 (290)
311 3end_A Light-independent proto 23.1 76 0.0026 30.9 4.8 40 83-127 39-78 (307)
312 1t0i_A YLR011WP; FMN binding p 23.1 84 0.0029 28.0 4.8 40 85-127 1-46 (191)
313 1srr_A SPO0F, sporulation resp 23.1 2.7E+02 0.0093 21.8 10.3 107 430-549 4-120 (124)
314 1w6u_A 2,4-dienoyl-COA reducta 23.1 73 0.0025 30.7 4.7 25 100-127 35-59 (302)
315 1xhf_A DYE resistance, aerobic 23.0 2.7E+02 0.0093 21.7 11.3 108 430-550 4-120 (123)
316 2qv0_A Protein MRKE; structura 23.0 3E+02 0.01 22.2 12.2 110 429-550 9-127 (143)
317 2bgk_A Rhizome secoisolaricire 23.0 67 0.0023 30.5 4.3 25 100-127 25-49 (278)
318 2w37_A Ornithine carbamoyltran 22.9 2.8E+02 0.0096 27.9 8.9 85 387-483 166-254 (359)
319 2vou_A 2,6-dihydroxypyridine h 22.9 56 0.0019 33.1 3.9 35 82-127 3-37 (397)
320 1n7h_A GDP-D-mannose-4,6-dehyd 22.8 55 0.0019 32.8 3.8 25 100-127 37-61 (381)
321 2a35_A Hypothetical protein PA 22.8 45 0.0016 30.1 2.9 34 84-127 5-40 (215)
322 2xj4_A MIPZ; replication, cell 22.8 66 0.0022 31.1 4.2 38 85-128 4-43 (286)
323 3nav_A Tryptophan synthase alp 22.7 5.1E+02 0.017 24.8 11.2 119 399-523 97-237 (271)
324 3crn_A Response regulator rece 22.6 3E+02 0.01 22.0 11.9 108 430-550 4-121 (132)
325 3cz5_A Two-component response 22.6 3.2E+02 0.011 22.4 10.8 110 429-550 5-125 (153)
326 3dfu_A Uncharacterized protein 22.6 47 0.0016 31.4 2.9 33 83-126 5-37 (232)
327 1g3q_A MIND ATPase, cell divis 22.6 75 0.0026 29.3 4.5 26 102-127 15-40 (237)
328 1orr_A CDP-tyvelose-2-epimeras 22.6 57 0.002 32.0 3.8 24 100-126 10-33 (347)
329 2fzv_A Putative arsenical resi 22.5 81 0.0028 30.7 4.7 43 82-127 56-98 (279)
330 1hyq_A MIND, cell division inh 22.5 78 0.0027 29.8 4.6 26 102-127 15-40 (263)
331 1jay_A Coenzyme F420H2:NADP+ o 22.4 63 0.0021 29.4 3.8 33 85-127 1-33 (212)
332 3hwr_A 2-dehydropantoate 2-red 22.4 67 0.0023 31.7 4.2 34 82-127 17-50 (318)
333 4hy3_A Phosphoglycerate oxidor 22.3 1.8E+02 0.0062 29.4 7.5 44 468-511 224-272 (365)
334 3f2v_A General stress protein 22.3 47 0.0016 30.3 2.8 38 85-127 2-39 (192)
335 3ius_A Uncharacterized conserv 22.3 52 0.0018 31.4 3.3 33 84-127 5-37 (286)
336 4ep1_A Otcase, ornithine carba 22.3 3.5E+02 0.012 26.9 9.4 84 387-483 169-256 (340)
337 2c20_A UDP-glucose 4-epimerase 22.3 59 0.002 31.7 3.8 24 104-127 11-34 (330)
338 3i42_A Response regulator rece 22.2 2.9E+02 0.0099 21.7 9.6 108 430-550 4-122 (127)
339 1zco_A 2-dehydro-3-deoxyphosph 22.2 3.8E+02 0.013 25.5 9.4 97 408-506 29-138 (262)
340 4ekn_B Aspartate carbamoyltran 22.2 2.1E+02 0.0073 28.1 7.7 112 351-488 121-233 (306)
341 1d4a_A DT-diaphorase, quinone 22.1 87 0.003 30.2 4.9 40 85-127 3-42 (273)
342 2ark_A Flavodoxin; FMN, struct 22.1 71 0.0024 28.6 4.0 38 85-127 5-43 (188)
343 4em8_A Ribose 5-phosphate isom 22.1 90 0.0031 27.2 4.3 39 81-127 4-42 (148)
344 1zh2_A KDP operon transcriptio 22.0 2.8E+02 0.0095 21.5 10.1 107 431-550 3-118 (121)
345 1h5q_A NADP-dependent mannitol 22.0 57 0.002 30.6 3.5 25 100-127 23-47 (265)
346 4had_A Probable oxidoreductase 21.9 1.9E+02 0.0065 28.5 7.6 92 401-505 24-117 (350)
347 2k6g_A Replication factor C su 21.7 1.3E+02 0.0043 24.7 5.1 10 401-410 36-45 (109)
348 1fmc_A 7 alpha-hydroxysteroid 21.7 87 0.003 29.1 4.7 25 100-127 20-44 (255)
349 3noy_A 4-hydroxy-3-methylbut-2 21.6 2.9E+02 0.01 27.7 8.5 115 399-513 29-149 (366)
350 1ehi_A LMDDL2, D-alanine:D-lac 21.6 65 0.0022 32.6 4.0 44 82-127 1-45 (377)
351 2wm3_A NMRA-like family domain 21.5 54 0.0019 31.6 3.3 34 84-127 5-39 (299)
352 2g76_A 3-PGDH, D-3-phosphoglyc 21.4 1.3E+02 0.0043 30.1 6.1 44 468-511 213-261 (335)
353 2ekl_A D-3-phosphoglycerate de 21.4 2.8E+02 0.0094 27.2 8.5 44 468-511 190-238 (313)
354 2ppv_A Uncharacterized protein 21.4 71 0.0024 31.9 4.0 37 82-129 2-38 (332)
355 3lk7_A UDP-N-acetylmuramoylala 21.3 78 0.0027 33.0 4.6 34 82-126 7-40 (451)
356 2p5y_A UDP-glucose 4-epimerase 21.3 53 0.0018 31.8 3.2 23 101-126 10-32 (311)
357 4g2n_A D-isomer specific 2-hyd 21.3 1.5E+02 0.005 29.8 6.5 45 467-511 220-269 (345)
358 3dfz_A SIRC, precorrin-2 dehyd 21.3 2.3E+02 0.0079 26.4 7.5 119 416-550 41-163 (223)
359 2cok_A Poly [ADP-ribose] polym 21.3 30 0.001 28.8 1.1 67 428-505 12-78 (113)
360 3alj_A 2-methyl-3-hydroxypyrid 21.3 58 0.002 32.7 3.5 35 82-127 9-43 (379)
361 3tpf_A Otcase, ornithine carba 21.2 5.3E+02 0.018 25.2 10.4 133 311-488 88-227 (307)
362 2vns_A Metalloreductase steap3 21.2 80 0.0027 29.0 4.2 33 84-127 28-60 (215)
363 2cuk_A Glycerate dehydrogenase 21.2 1.8E+02 0.0061 28.6 7.0 44 468-511 187-235 (311)
364 1qzu_A Hypothetical protein MD 21.2 63 0.0021 29.9 3.4 40 82-128 17-57 (206)
365 4e38_A Keto-hydroxyglutarate-a 21.1 3.7E+02 0.013 25.2 8.9 85 416-503 46-132 (232)
366 3vps_A TUNA, NAD-dependent epi 21.1 58 0.002 31.5 3.4 34 84-127 7-40 (321)
367 2bw0_A 10-FTHFDH, 10-formyltet 21.0 85 0.0029 31.3 4.6 35 82-127 20-54 (329)
368 1sqs_A Conserved hypothetical 21.0 78 0.0027 29.7 4.2 40 85-127 2-42 (242)
369 3evt_A Phosphoglycerate dehydr 21.0 2E+02 0.0069 28.4 7.4 45 467-511 184-233 (324)
370 2hna_A Protein MIOC, flavodoxi 20.9 64 0.0022 27.5 3.3 36 85-125 2-37 (147)
371 2rcy_A Pyrroline carboxylate r 20.9 55 0.0019 31.0 3.1 35 82-127 2-40 (262)
372 1t5b_A Acyl carrier protein ph 20.8 84 0.0029 28.1 4.3 41 85-127 2-44 (201)
373 1yb1_A 17-beta-hydroxysteroid 20.8 77 0.0026 30.2 4.2 25 100-127 40-64 (272)
374 2q1w_A Putative nucleotide sug 20.8 67 0.0023 31.5 3.9 36 82-127 19-54 (333)
375 3rft_A Uronate dehydrogenase; 20.8 43 0.0015 31.9 2.3 34 85-127 3-36 (267)
376 3t8y_A CHEB, chemotaxis respon 20.7 3.8E+02 0.013 22.5 12.6 112 427-550 23-155 (164)
377 1x0v_A GPD-C, GPDH-C, glycerol 20.7 40 0.0014 33.7 2.2 36 81-127 5-47 (354)
378 3vnd_A TSA, tryptophan synthas 20.6 5.6E+02 0.019 24.4 11.9 119 399-523 95-235 (267)
379 2nzw_A Alpha1,3-fucosyltransfe 20.6 1.4E+02 0.0049 30.2 6.2 79 470-560 227-308 (371)
380 3mm4_A Histidine kinase homolo 20.6 4.4E+02 0.015 23.3 10.8 108 429-550 61-196 (206)
381 3lcm_A SMU.1420, putative oxid 20.6 70 0.0024 29.0 3.6 38 85-127 1-39 (196)
382 3g0o_A 3-hydroxyisobutyrate de 20.5 72 0.0025 31.1 4.0 34 83-127 6-39 (303)
383 1ja9_A 4HNR, 1,3,6,8-tetrahydr 20.5 79 0.0027 29.8 4.2 24 100-126 30-53 (274)
384 3q0i_A Methionyl-tRNA formyltr 20.5 76 0.0026 31.5 4.1 35 82-127 5-39 (318)
385 1gy8_A UDP-galactose 4-epimera 20.5 67 0.0023 32.3 3.9 34 84-127 2-36 (397)
386 3u3x_A Oxidoreductase; structu 20.5 3.4E+02 0.012 26.9 9.2 92 400-505 26-119 (361)
387 3nvt_A 3-deoxy-D-arabino-heptu 20.5 6.7E+02 0.023 25.3 12.6 101 403-507 144-258 (385)
388 1mvl_A PPC decarboxylase athal 20.5 86 0.0029 29.1 4.2 37 82-127 17-54 (209)
389 1kyq_A Met8P, siroheme biosynt 20.4 80 0.0027 30.6 4.1 36 82-128 11-46 (274)
390 2qip_A Protein of unknown func 20.3 1.7E+02 0.006 25.5 6.2 67 411-480 90-158 (165)
391 3fwz_A Inner membrane protein 20.3 45 0.0016 28.3 2.1 34 84-128 7-40 (140)
392 1sbz_A Probable aromatic acid 20.3 88 0.003 28.7 4.2 36 85-127 1-37 (197)
393 1f06_A MESO-diaminopimelate D- 20.3 1.3E+02 0.0045 29.6 5.9 38 471-508 55-92 (320)
394 4g6h_A Rotenone-insensitive NA 20.2 44 0.0015 35.5 2.4 33 84-127 42-74 (502)
395 1ml4_A Aspartate transcarbamoy 20.2 1.7E+02 0.0058 28.8 6.5 92 386-488 144-236 (308)
396 2dbq_A Glyoxylate reductase; D 20.2 1.9E+02 0.0066 28.6 7.2 44 468-511 198-246 (334)
397 1vhc_A Putative KHG/KDPG aldol 20.2 4.4E+02 0.015 24.3 9.3 85 416-503 29-115 (224)
398 2xdo_A TETX2 protein; tetracyc 20.2 66 0.0023 32.6 3.8 35 82-127 24-58 (398)
399 3igf_A ALL4481 protein; two-do 20.1 90 0.0031 31.8 4.7 35 85-126 2-38 (374)
400 1u7z_A Coenzyme A biosynthesis 20.1 91 0.0031 29.3 4.4 25 100-127 33-57 (226)
401 2gn4_A FLAA1 protein, UDP-GLCN 20.0 68 0.0023 31.9 3.7 36 82-127 19-56 (344)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=1.7e-81 Score=695.79 Aligned_cols=526 Identities=70% Similarity=1.177 Sum_probs=449.9
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
..||||||++|++|+.|+||++++++.|+++|+++||+|+||+|.|+++.+.++......+.+.++...+++++...+||
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 47999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCC---CCCceEEEecccccch
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS---GPYDVVFVANDWHTSL 239 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~pDvV~h~h~~~~~~ 239 (609)
+++++++|.++.+.+++++..+|++..|.+|.|+..||.+||++++++++.+.+....++. +++||+ |+|||++++
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi-H~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF-VCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE-EEESGGGST
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE-EECcchHHH
Confidence 9999999999999999999999999999999999999999999999999888766554433 234555 999999999
Q ss_pred HHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEE
Q 007300 240 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 319 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 319 (609)
+|.+++..++..+.+.++|+|+|+||+.+||.++...+..++++..+....++...+..+.....+++++.++..||.|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999888888889999999999999999999999988888877766666666666667778999999999999999
Q ss_pred eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCC
Q 007300 320 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 399 (609)
Q Consensus 320 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 399 (609)
|||+.+++++.+...+|.+++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|...+..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766677777766777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.|+|+|+||+.++||++.|++|++++.+++.+|+|+|.|+...+..++.+...+++++.+.+.++.++.+.+|++||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999998999999999999999999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 559 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~ 559 (609)
+||++|+||++++|||+||+|||+|++||+.|+|.++.|||+++..+.++.+|++.|+++|+++|+++++.++.+.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888899999999999999999999987667789999
Q ss_pred HHHHHHhhCCchHHHHHHHHHHHHHHHcCCCCCCCCCCcccchhhhcCCC
Q 007300 560 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 609 (609)
Q Consensus 560 ~~~~~~~~fs~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (609)
.+++|.++|||+.+|++|+++|+++...++.|+.++++++|+++|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888999999999999999999998
No 2
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.2e-49 Score=436.73 Aligned_cols=464 Identities=32% Similarity=0.568 Sum_probs=349.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEE-EE-EeCCEEeeEEEEEeeEcCe
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-EL-KVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~gv 162 (609)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....+...... .. ..++ ...+.+...+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999888656799999999999999999999999998754322211111000 00 0000 122333345799
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++++..+.++.+ .+ .+|+...+.+|.++..++..+...+.++++.+.. ..+|||| |+|+|..++++.
T Consensus 78 ~v~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Div-h~~~~~~~~~~~ 145 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----PG-SPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP------FWRPDVV-HAHDWHAGLAPA 145 (485)
T ss_dssp EEEEEECHHHHCC----SS-CSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST------TCCCSEE-EEETGGGTTHHH
T ss_pred EEEEEeChhhccC----CC-CccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc------CCCCCEE-EeeccchhHHHH
Confidence 9999976654432 00 1454444455777878887777777777665431 0159999 999998888777
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+++... .++|+|+++|+..+++.+....+..++++..+.... .. .......+++..++.+|.++++|
T Consensus 146 ~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~ad~vi~~S 212 (485)
T 2qzs_A 146 YLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIH----GL---EFNGQISFLKAGLYYADHITAVS 212 (485)
T ss_dssp HHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTT----TT---EETTEEEHHHHHHHHCSEEEESS
T ss_pred HHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccc----cc---cccccccHHHHHHHhcCeEEecC
Confidence 765211 589999999998766555443333334333221100 00 00112356778889999999999
Q ss_pred HHHHHHHhcccCCCccchhhh--cc--CCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 323 PHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+.+++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|..+..+..+|+.+++ .++...+..+++++|++.++
T Consensus 213 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~ 290 (485)
T 2qzs_A 213 PTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLKVDD 290 (485)
T ss_dssp HHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCCCCT
T ss_pred HHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCCCCC
Confidence 9999998751 1232211111 11 38999999999999998877777777877765 56677788999999998755
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
+.++|+|+||+.++||++.+++|++.+.+++++|+|+|+|++.+.+.++++..++++++.++.+++.+.+..+|+.||++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~ 370 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVI 370 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEE
Confidence 67899999999999999999999999977799999999998778889999998887778767777878778899999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---------cceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
|+||++|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ +++|+++++++|.++++
T Consensus 371 v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~ 440 (485)
T 2qzs_A 371 LVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRRAFV 440 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHHHHH
T ss_pred EECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 899987 99999999999999994
Q ss_pred hh-CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 550 TY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 550 ~~-~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
.+ +++.+.++++++..++|||+.++++|+++|+++....
T Consensus 441 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~~ 480 (485)
T 2qzs_A 441 LWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLEH 480 (485)
T ss_dssp HHTSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC---
T ss_pred HcCCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhhh
Confidence 21 2678888998888899999999999999999987543
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=7.3e-50 Score=438.37 Aligned_cols=466 Identities=35% Similarity=0.564 Sum_probs=351.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCc-eEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD-VVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....++.. ...+..+... ...+..+...+|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 899999999888545799999999999999999999999998764322211110 0001000000 11233344568999
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhh-ccCCCCCCCCCCceEEEecccccchHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++++.+.++.+ . ..+|+...+.+|.++..++..++..+.++++.+ ... +|||| |+|+|..++++.
T Consensus 80 v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~DiI-h~~~~~~~~~~~ 146 (485)
T 1rzu_A 80 LLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGW-------RPDMV-HAHDWQAAMTPV 146 (485)
T ss_dssp EEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSC-------CCSEE-EEEHHHHTTHHH
T ss_pred EEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhccCC-------CCCEE-EecccchhHHHH
Confidence 999877654432 0 125554445567788888888887777776654 222 59999 999988887777
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
+++... ..++|+|+++|+..+++.+....+..++++..+...- .. .......+++..++.+|.++++|
T Consensus 147 ~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~ad~vi~~S 214 (485)
T 1rzu_A 147 YMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME----GI---EYYNDVSFLKGGLQTATALSTVS 214 (485)
T ss_dssp HHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTT----TT---EETTEEEHHHHHHHHCSEEEESC
T ss_pred HHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccc----cc---cccccccHHHHHHhhcCEEEecC
Confidence 766531 1489999999998776655544444444443322100 00 00012356788899999999999
Q ss_pred HHHHHHHhcccCCCccchhhh--ccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCC
Q 007300 323 PHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 400 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~ 400 (609)
+.+++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..++ .++...+..+++++|++.++ .
T Consensus 215 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~-~ 291 (485)
T 1rzu_A 215 PSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDDG-S 291 (485)
T ss_dssp HHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCSS-S
T ss_pred HhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCCC-C
Confidence 9999998751 1231111111 1238999999999999998877767777777664 56777788999999998542 3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
++|+|+||+.++||++.|++|++.+.+++++|+|+|+|++.+.+.++++..++++++.++.+++.+.+..+|+.||++|+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEE
Confidence 69999999999999999999999997779999999999877888999999888777886777788887889999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---------cceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---------~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.++++.+
T Consensus 372 pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~~~ 441 (485)
T 1rzu_A 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVRYY 441 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 899987 9999999999999999421
Q ss_pred -CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcCC
Q 007300 552 -GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 589 (609)
Q Consensus 552 -~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~~ 589 (609)
+++.+.++++++..+.|||+.++++|+++|++++....
T Consensus 442 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 442 HDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp TCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC---
T ss_pred CCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCCC
Confidence 27788889988888999999999999999999986543
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=7e-47 Score=407.37 Aligned_cols=423 Identities=24% Similarity=0.341 Sum_probs=325.6
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
++|||++|+.+++| ...||++.++.+|+++|+++||+|+|+++.++...+.. .....+ -+.....+.++...+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE--IGKIRV--FGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE--EEEEEE--TTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh--hccccc--cCcccceeeeeccCCCc
Confidence 36999999999888 56899999999999999999999999999876554421 111122 33455666777788999
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcch-HHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIP 241 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~ 241 (609)
+++.++. .++.+ ..+|+. |.++ ..++..+...+.+.++.+-.. ..+|||| |+|+|...+++
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~Dii-~~~~~~~~~~~ 137 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLRE-----EPLPDVV-HFHDWHTVFAG 137 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTTT-----SCCCSEE-EEESGGGHHHH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhcc-----CCCCeEE-EecchhhhhhH
Confidence 9999987 44443 234431 4566 777888888888887776100 1259999 99999888888
Q ss_pred HHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEee
Q 007300 242 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 321 (609)
Q Consensus 242 ~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 321 (609)
.+++.. .++|+|+++|+....+. +...+....+ .+........+++..++.+|.++++
T Consensus 138 ~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ad~ii~~ 195 (439)
T 3fro_A 138 ALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGL--------------SELAPYPDIDPEHTGGYIADIVTTV 195 (439)
T ss_dssp HHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTC--------------GGGCCSSEECHHHHHHHHCSEEEES
T ss_pred HHHhhc-------cCCCEEEEecccccccC-chHHhCcccc--------------ccccccceeeHhhhhhhhccEEEec
Confidence 877754 59999999998764221 1100000000 0000112336778889999999999
Q ss_pred CHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCc
Q 007300 322 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 401 (609)
Q Consensus 322 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~ 401 (609)
|+.+++.... .++... .++.+||||+|.+.|.|... ...+...+..+++++|++. + +
T Consensus 196 S~~~~~~~~~--~~~~~~------~~i~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~--~-~ 252 (439)
T 3fro_A 196 SRGYLIDEWG--FFRNFE------GKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMDE--G-V 252 (439)
T ss_dssp CHHHHHHTHH--HHGGGT------TSEEECCCCCCTTTSCGGGS------------CSCHHHHHHHHHHHHTCCS--C-E
T ss_pred CHHHHHHHhh--hhhhcC------CceeecCCCCCchhcCcccc------------cchhhhhHHHHHHHcCCCC--C-c
Confidence 9999988442 122232 39999999999998877521 1123456788999999863 3 8
Q ss_pred EEEEEeccc-cccCHHHHHHHHhhccc----CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee-cChHHHHHHHHhC
Q 007300 402 VIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK-FNIPLAHMIIAGA 475 (609)
Q Consensus 402 ~i~~iGrl~-~~Kg~~~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~-~~~~~~~~~l~~a 475 (609)
+|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|+..+.+.++++..++++ +..+.+ .+.+++..+|+.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~-~~~~~g~~~~~~~~~~~~~a 331 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGN-VKVITEMLSREFVRELYGSV 331 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTT-EEEECSCCCHHHHHHHHTTC
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCC-EEEEcCCCCHHHHHHHHHHC
Confidence 999999999 99999999999999977 6899999999997778999999999884 544444 6888898999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH-hhCHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQ 554 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~~ 554 (609)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ +++|+++++++|.++++ + ++
T Consensus 332 dv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~--~~ 398 (439)
T 3fro_A 332 DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS--RS 398 (439)
T ss_dssp SEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--TT
T ss_pred CEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--HH
Confidence 99999999999999999999999999999999999999887 99987 99999999999999999 6 34
Q ss_pred HHHHHHHHHHH--hhCCchHHHHHHHHHHHHHHHc
Q 007300 555 ALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 555 ~~~~~~~~~~~--~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+.++++++.. ++|||+.++++|+++|++++..
T Consensus 399 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 399 DLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 44445544432 7799999999999999998754
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=6.1e-41 Score=362.07 Aligned_cols=402 Identities=18% Similarity=0.244 Sum_probs=282.9
Q ss_pred CccccccCCCceEEEEEeecCCcc-----ccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEE
Q 007300 75 PSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKI 149 (609)
Q Consensus 75 ~~~~~~~~~~MkIl~vs~~~~P~~-----~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~ 149 (609)
+++...+++.|||++|+..|+|.. ..||.+.++.+|+++|+++||+|+|+++........
T Consensus 11 ~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--------------- 75 (438)
T 3c48_A 11 SSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE--------------- 75 (438)
T ss_dssp --------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS---------------
T ss_pred ccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc---------------
Confidence 344445566799999999888731 369999999999999999999999999874321110
Q ss_pred eeEEEEEeeEcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHh-hhhhccCCCCCCCCCCce
Q 007300 150 EKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYDV 228 (609)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~pDv 228 (609)
.....+|++++.+....+... . ..+....+..+...+++. ++... +||+
T Consensus 76 -----~~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~~---------~~Di 125 (438)
T 3c48_A 76 -----IVRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREKV---------TYDL 125 (438)
T ss_dssp -----EEEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHTC---------CCSE
T ss_pred -----cccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhccC---------CCCE
Confidence 011235677776643221100 0 000011112233333333 22221 3999
Q ss_pred EEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHH
Q 007300 229 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 308 (609)
Q Consensus 229 V~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (609)
| |+|.|...+++.++... .++|+|+++|+........ + ...... . ......+.
T Consensus 126 v-~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~---~---~~~~~~-~------------~~~~~~~~ 178 (438)
T 3c48_A 126 I-HSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY---R---DDSDTP-E------------SEARRICE 178 (438)
T ss_dssp E-EEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-H------------HHHHHHHH
T ss_pred E-EeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc---c---cccCCc-c------------hHHHHHHH
Confidence 9 99987766666555544 4899999999754311000 0 000000 0 00112345
Q ss_pred HHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 309 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 309 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
+..++.+|.++++|+..++.+.+. +|++.+ ++.+||||+|...|.+.... .+..+
T Consensus 179 ~~~~~~~d~ii~~s~~~~~~~~~~--~g~~~~------k~~vi~ngvd~~~~~~~~~~-----------------~~~~~ 233 (438)
T 3c48_A 179 QQLVDNADVLAVNTQEEMQDLMHH--YDADPD------RISVVSPGADVELYSPGNDR-----------------ATERS 233 (438)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHH--HCCCGG------GEEECCCCCCTTTSCCC---------------------CHHH
T ss_pred HHHHhcCCEEEEcCHHHHHHHHHH--hCCChh------heEEecCCccccccCCcccc-----------------hhhhh
Confidence 667889999999999999998752 455544 89999999999888765311 12347
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C--CeEEEEEeC----CChhhHHHHHHHHHhCC--CceE
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP--EKAR 458 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~--~~v~ 458 (609)
++++|++. +.++|+|+||+.+.||++.+++|+..+.+ + +++|+|+|+ |. ..+.++++..+++ +++.
T Consensus 234 r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~~~v~ 309 (438)
T 3c48_A 234 RRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVEKRIR 309 (438)
T ss_dssp HHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCTTTEE
T ss_pred HHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCCCcEE
Confidence 88888864 44899999999999999999999999975 3 799999998 54 5667777776654 5688
Q ss_pred EEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHH
Q 007300 459 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 459 ~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
+.+..+.+++..+|+.||++|+||..|+||++++|||++|+|||+++.||..|++.++.+|+++ ++.|++
T Consensus 310 ~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~ 379 (438)
T 3c48_A 310 FLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------DGHSPH 379 (438)
T ss_dssp EECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------SSCCHH
T ss_pred EcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------CCCCHH
Confidence 8887788888899999999999999999999999999999999999999999999999999987 899999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCCC
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 590 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~~ 590 (609)
+++++|.+++++ ++.+.++++++ +.+ |||+.++++|+++|++++.....
T Consensus 380 ~la~~i~~l~~~--~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 380 AWADALATLLDD--DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhccc
Confidence 999999999997 66666666555 345 99999999999999999986543
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=2e-40 Score=364.92 Aligned_cols=412 Identities=16% Similarity=0.133 Sum_probs=288.3
Q ss_pred CceEEEEEeecCCc---------cccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc-ccCCCceEEEEEeCCEEeeEE
Q 007300 84 GLNILFVGTEVAPW---------SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (609)
Q Consensus 84 ~MkIl~vs~~~~P~---------~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (609)
.|||++|+..++|. ...||.+.++.+|+++|+++||+|+|+++...... ..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------------- 71 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE--------------- 71 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS---------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh---------------
Confidence 49999999988773 14699999999999999999999999998643211 100000
Q ss_pred EEEee--EcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEE
Q 007300 154 FFHCH--KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFV 231 (609)
Q Consensus 154 ~~~~~--~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h 231 (609)
.... ..|++++.+....... .. ...-...+..+...+.+.++.... +|||| |
T Consensus 72 -~~~~~~~~gv~v~~~~~~~~~~----------~~------~~~~~~~~~~~~~~l~~~l~~~~~--------~~Div-h 125 (499)
T 2r60_A 72 -IDYYQETNKVRIVRIPFGGDKF----------LP------KEELWPYLHEYVNKIINFYREEGK--------FPQVV-T 125 (499)
T ss_dssp -EEECTTCSSEEEEEECCSCSSC----------CC------GGGCGGGHHHHHHHHHHHHHHHTC--------CCSEE-E
T ss_pred -HHhccCCCCeEEEEecCCCcCC----------cC------HHHHHHHHHHHHHHHHHHHHhcCC--------CCCEE-E
Confidence 0001 2467777664321100 00 000000111223334444444211 49999 9
Q ss_pred ecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCc-cccccccccccCCCCCcCCchhHHHHH
Q 007300 232 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKA 310 (609)
Q Consensus 232 ~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~ 310 (609)
+|.+..++++.++... .++|+|+++|+..+..... +...+.. ..+...+. ......+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 186 (499)
T 2r60_A 126 THYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIAERL 186 (499)
T ss_dssp EEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHHHHH
T ss_pred EcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHHHHH
Confidence 9987666666555544 4899999999864311100 0000000 00000000 0011234477
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCC-c----cchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.++.+|.++++|+..++.+.+...+| + +.+ ++.+||||+|...|.+... ...+
T Consensus 187 ~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~~~~ 244 (499)
T 2r60_A 187 TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------DKIK 244 (499)
T ss_dssp HHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------HHHH
T ss_pred HHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------hhhH
Confidence 78899999999999999987520134 3 333 8999999999998876531 1234
Q ss_pred HHHHHHhC-----CCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C-CeEEEEEeC--CC----h-------hhHH
Q 007300 386 EALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK----K-------PMEK 444 (609)
Q Consensus 386 ~~~~~~~g-----l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~-~~~lvivG~--g~----~-------~~~~ 444 (609)
..+++++| ++. +.++|+|+||+.+.||++.+++|+..+.+ + .++|+|+|+ |+ . .+.+
T Consensus 245 ~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~ 322 (499)
T 2r60_A 245 AKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILG 322 (499)
T ss_dssp HHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHH
T ss_pred HHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHH
Confidence 66788877 654 44899999999999999999999999965 2 468999998 32 0 1267
Q ss_pred HHHHHHHhCC--CceEEEeecChHHHHHHHHhC----cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcc
Q 007300 445 QLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 518 (609)
Q Consensus 445 ~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~ 518 (609)
.++++..+++ ++|.+.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+
T Consensus 323 ~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~ 402 (499)
T 2r60_A 323 KIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKY 402 (499)
T ss_dssp HHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTS
T ss_pred HHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCce
Confidence 7888877654 568888888888899999999 9999999999999999999999999999999999999999999
Q ss_pred eeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCCCC
Q 007300 519 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSEP 591 (609)
Q Consensus 519 G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~~~ 591 (609)
|+++ +++|+++++++|.+++++ ++.+.++++++ +.+.|||+.++++|+++|++++......
T Consensus 403 g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~~ 466 (499)
T 2r60_A 403 GVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEE 466 (499)
T ss_dssp SEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC----
T ss_pred EEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhhh
Confidence 9987 999999999999999997 66666666555 4567999999999999999999875443
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.6e-40 Score=350.07 Aligned_cols=368 Identities=21% Similarity=0.278 Sum_probs=279.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc-ccCCCceEEEEEeCCEEeeEEEEEeeEc
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (609)
|+.|||++|+..|+|. .||.+.++.+|+++| +||+|+|+++...... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 4579999999998886 899999999999999 6999999998754321 1000 112
Q ss_pred CeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccc-h
Q 007300 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTS-L 239 (609)
Q Consensus 161 gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~-~ 239 (609)
|++++.+....++.. ..+...+.+.++.. +||+| |+|..... .
T Consensus 57 ~~~~~~~~~~~~~~~-------------------------~~~~~~l~~~~~~~----------~~Dvv-~~~~~~~~~~ 100 (394)
T 3okp_A 57 DYEVIRWPRSVMLPT-------------------------PTTAHAMAEIIRER----------EIDNV-WFGAAAPLAL 100 (394)
T ss_dssp SSEEEEESSSSCCSC-------------------------HHHHHHHHHHHHHT----------TCSEE-EESSCTTGGG
T ss_pred ceEEEEccccccccc-------------------------hhhHHHHHHHHHhc----------CCCEE-EECCcchHHH
Confidence 444444432111110 12233344444444 59999 88865443 3
Q ss_pred HHHHHHHhhcCCCcccCce-EEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEE
Q 007300 240 IPCYLKTMYKPKGMYKSAK-VVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 318 (609)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~~-~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 318 (609)
+..+++. .++| +|+++|+...... .......+++..++.+|.+
T Consensus 101 ~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~d~i 144 (394)
T 3okp_A 101 MAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEVDVL 144 (394)
T ss_dssp GHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhCCEE
Confidence 3444443 3564 8899996432000 0012335567788999999
Q ss_pred EeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 319 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 319 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..+++++|++.+
T Consensus 145 i~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~~~- 197 (394)
T 3okp_A 145 TYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFTDT- 197 (394)
T ss_dssp EESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCCTT-
T ss_pred EEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCCcC-
Confidence 99999999999862 221 12899999999999887742 2336788999998754
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
.++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++.....+++.+.+..+.+++..+|+.||
T Consensus 198 -~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 274 (394)
T 3okp_A 198 -TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAAD 274 (394)
T ss_dssp -CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCS
T ss_pred -ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCC
Confidence 4899999999999999999999999866 689999999987 66777777755556798888888889999999999
Q ss_pred EEEecCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 477 FILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 477 v~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
++|+||.+ |+||++++|||++|+|||+++.||..|++.++ +|+++ +++|+++++++|.++++
T Consensus 275 ~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 275 IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIELLD 343 (394)
T ss_dssp EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHHHHT
T ss_pred EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999 99999999999999999999999999999999 99987 99999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHHHcCC
Q 007300 550 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGS 589 (609)
Q Consensus 550 ~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~~~~~ 589 (609)
+ ++.+.++++++ +.++|||+.++++|+++|+++.....
T Consensus 344 ~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~ 384 (394)
T 3okp_A 344 D--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLA 384 (394)
T ss_dssp C--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcc
Confidence 7 66666666555 46789999999999999999876543
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=3.4e-39 Score=368.79 Aligned_cols=424 Identities=14% Similarity=0.168 Sum_probs=280.8
Q ss_pred CceEEEEEeecC---------CccccchHHHHhhc--------hhHHHHhCCCeEE----EEeecCCCccccCCCceEEE
Q 007300 84 GLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (609)
Q Consensus 84 ~MkIl~vs~~~~---------P~~~~GG~~~~~~~--------La~aL~~~Gh~V~----vit~~~~~~~~~~~~~~~~~ 142 (609)
.|+|++||...+ |. +||...++.+ |+++|+++||+|+ |+|...+.. ...+.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 689999999876 76 9999999985 7777788999886 998775432 1111111111
Q ss_pred EEeCCEEeeEEEEEeeEcCeeEEEEeCcc-------hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHH-HHHHHhhhhh
Q 007300 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW-------FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRIL 214 (609)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~v~~~~-------~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~-~~~~~~~~~~ 214 (609)
. +. ..+|+.++++.... ++.+ ..++ ... ..|. ..+...++..
T Consensus 355 ~-i~-----------~~~gv~I~RvP~~~~~g~l~~~l~k------~~L~---------~~L---~~F~~~~l~~il~~~ 404 (816)
T 3s28_A 355 R-VY-----------DSEYCDILRVPFRTEKGIVRKWISR------FEVW---------PYL---ETYTEDAAVELSKEL 404 (816)
T ss_dssp E-CT-----------TCSSEEEEEECEEETTEEECSCCCT------TTCG---------GGH---HHHHHHHHHHHHHHC
T ss_pred e-ec-----------CcCCeEEEEecCCCccccccccccH------HHHH---------HHH---HHHHHHHHHHHHHhc
Confidence 0 00 12366666664221 1111 1111 111 2233 2333333332
Q ss_pred ccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCcc-ccccccccc
Q 007300 215 NLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFI 293 (609)
Q Consensus 215 ~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 293 (609)
. ++|||| |+|.|.+++++.+++.. .++|+|+|.|+........ . +... .....+.
T Consensus 405 ~--------~~PDVI-HsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~~~-~-----~~~~~~~~~~y~-- 460 (816)
T 3s28_A 405 N--------GKPDLI-IGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKYPD-S-----DIYWKKLDDKYH-- 460 (816)
T ss_dssp S--------SCCSEE-EEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHSTT-T-----TTTHHHHHHHHC--
T ss_pred C--------CCCeEE-EeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccccc-c-----cchhhhHHHHHH--
Confidence 2 259999 99999988888887766 4999999999864321110 0 0000 0000000
Q ss_pred cCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhccc-CCCcc----chhh--------hccCCeeEecCCCCCCCc
Q 007300 294 DGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LDNI--------IRKTGIKGIVNGMDVQEW 360 (609)
Q Consensus 294 ~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-~~g~~----~~~~--------~~~~~i~vI~nGvd~~~~ 360 (609)
....+...+..++.||.|+++|+..++.+.... .++.. +..+ ....++.+||||+|.+.|
T Consensus 461 -------~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 461 -------FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 533 (816)
T ss_dssp -------HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTS
T ss_pred -------HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHc
Confidence 001122345688999999999999998643311 01110 0000 001289999999999999
Q ss_pred CCCCccc--cccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEe
Q 007300 361 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 436 (609)
Q Consensus 361 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG 436 (609)
.|...+. +...++. .+....+....++.+|+..+++.++|+|+||+.+.||++.+++|+.++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~~---i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHSE---IEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHHH---HHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhcccc---ccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 0000000 00000001123455666445677999999999999999999999999976 689999999
Q ss_pred CCCh---------hhHHHHHHHHHhCC--CceEEEeec----ChHHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCc
Q 007300 437 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 500 (609)
Q Consensus 437 ~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~----~~~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~P 500 (609)
+|++ ...+.++++..+++ ++|.+.+.. +.+++..+++ ++|++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 25667777777765 467776633 3355666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhhCCchHH
Q 007300 501 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 573 (609)
Q Consensus 501 vI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll----~~~~~~~~~~~~~~~---~~~~fs~~~~ 573 (609)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.+.|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999987 9999999999998877 55 56666666665 4588999999
Q ss_pred HHHHHHHHHHHHH
Q 007300 574 AKKWEETLLNLEV 586 (609)
Q Consensus 574 a~~~~~~~~~l~~ 586 (609)
+++|+++|+.+..
T Consensus 759 a~~ll~lY~~~g~ 771 (816)
T 3s28_A 759 SQRLLTLTGVYGF 771 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999997753
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=3.4e-38 Score=336.17 Aligned_cols=371 Identities=18% Similarity=0.178 Sum_probs=263.5
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
.|+.-++...| |. .||.+.++.+|+++|+++||+|+++++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 36666677765 43 7999999999999999999999999986321100 0112333
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.+..+.+.. +. +.. .. ..+...+.+.++.. +|||| |+|.+.......+
T Consensus 67 ~~~~~~~~~~~----------~~------~~~--~~-~~~~~~l~~~l~~~----------~~Dvv-~~~~~~~~~~~~~ 116 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YPP--YD-LALASKMAEVAQRE----------NLDIL-HVHYAIPHAICAY 116 (394)
T ss_dssp EECCCCC--------------CC------SCC--HH-HHHHHHHHHHHHHH----------TCSEE-EECSSTTHHHHHH
T ss_pred EEecccccccc----------cc------ccc--cc-HHHHHHHHHHHHHc----------CCCEE-EEcchhHHHHHHH
Confidence 33332211100 00 000 01 11233344444444 59999 9986554333333
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+...... .++|+|+++|+..... .+. ......+++..++.+|.++++|+
T Consensus 117 ~~~~~~~----~~~p~v~~~h~~~~~~---------~~~------------------~~~~~~~~~~~~~~ad~ii~~s~ 165 (394)
T 2jjm_A 117 LAKQMIG----ERIKIVTTLHGTDITV---------LGS------------------DPSLNNLIRFGIEQSDVVTAVSH 165 (394)
T ss_dssp HHHHHTT----TCSEEEEECCHHHHHT---------TTT------------------CTTTHHHHHHHHHHSSEEEESCH
T ss_pred HHHHhhc----CCCCEEEEEecCcccc---------cCC------------------CHHHHHHHHHHHhhCCEEEECCH
Confidence 3322110 2699999999743200 000 00123456778899999999999
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEE
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVI 403 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i 403 (609)
..++.+.+. ++. . .++.+||||+|...|.+.. +..++++++++. +.++|
T Consensus 166 ~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~~~i 214 (394)
T 2jjm_A 166 SLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SEKIL 214 (394)
T ss_dssp HHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----CEE
T ss_pred HHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CCeEE
Confidence 999998862 222 1 2899999999998887653 345677888764 44899
Q ss_pred EEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 404 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 404 ~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+|+||+.+.||++.+++|+..+.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+ + .+++..+|+.||++++
T Consensus 215 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g-~-~~~~~~~~~~adv~v~ 290 (394)
T 2jjm_A 215 IHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLG-K-QDNVAELLAMSDLMLL 290 (394)
T ss_dssp EEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCB-S-CSCTHHHHHTCSEEEE
T ss_pred EEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeC-c-hhhHHHHHHhCCEEEe
Confidence 999999999999999999999876 579999999987 5667777777654 4566655 3 3556679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 560 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~ 560 (609)
||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+++
T Consensus 291 ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~~~~ 358 (394)
T 2jjm_A 291 LSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHRNMG 358 (394)
T ss_dssp CCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHHHHH
T ss_pred ccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 999999999999999997 66666666
Q ss_pred HHH---HHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 561 KNG---MAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 561 ~~~---~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++ +.+.|||+.++++|+++|++++...
T Consensus 359 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 359 ERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 555 4589999999999999999998653
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=3.1e-37 Score=331.10 Aligned_cols=365 Identities=15% Similarity=0.114 Sum_probs=257.1
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeE
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHK 159 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (609)
..|++|||++++.. + ..||.+.++.+|+++|.++||+|++++...+..... . .
T Consensus 36 ~~~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~--~---------------------~ 88 (416)
T 2x6q_A 36 EKLKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFN--V---------------------T 88 (416)
T ss_dssp HTTTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHH--H---------------------H
T ss_pred hhhhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhh--h---------------------h
Confidence 34678999999986 3 269999999999999999999999998753210000 0 0
Q ss_pred cCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcch-HHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccc
Q 007300 160 RGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTS 238 (609)
Q Consensus 160 ~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~ 238 (609)
..+...+. +.+.+. +... ...+..+...+.+.++.. +|||| |+|++...
T Consensus 89 ----------~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~----------~~Dvv-~~~~~~~~ 138 (416)
T 2x6q_A 89 ----------KTFHNALQ---GNESLK------LTEEMKELYLNVNRENSKFIDLS----------SFDYV-LVHDPQPA 138 (416)
T ss_dssp ----------HHHHHHHT---TCCSCC------CCHHHHHHHHHHHHHHHHSSCGG----------GSSEE-EEESSTTG
T ss_pred ----------cccceeec---cccccc------ccHHHHHHHHHHHHHHHHHHhhc----------CCCEE-EEeccchh
Confidence 00000000 000000 1111 111122223333333332 59999 99987654
Q ss_pred hHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEE
Q 007300 239 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 318 (609)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 318 (609)
.+..+++ ..+|+|+++|+..... ....+.+++..+..+|.+
T Consensus 139 ~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~~ 179 (416)
T 2x6q_A 139 ALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDRY 179 (416)
T ss_dssp GGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCEE
Confidence 4332211 2489999999643210 001234556667788887
Q ss_pred E-eeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCC
Q 007300 319 L-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 397 (609)
Q Consensus 319 i-~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~ 397 (609)
+ ++|+...+.+ + ..++.+||||+|...+.+... ....+..+++++|++.
T Consensus 180 i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~~- 229 (416)
T 2x6q_A 180 IFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVDP- 229 (416)
T ss_dssp EESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCCT-
T ss_pred EEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCCC-
Confidence 6 5555443321 1 128999999999876654321 1233667888999875
Q ss_pred CCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCCh---hhHHHHHHHHHhCC--CceEEEeec---ChHH
Q 007300 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYP--EKARGVAKF---NIPL 467 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~--~~v~~~~~~---~~~~ 467 (609)
+.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+. ...+.++++..+++ +++.+.+.+ +.++
T Consensus 230 -~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~ 308 (416)
T 2x6q_A 230 -EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHARE 308 (416)
T ss_dssp -TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHH
T ss_pred -CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHH
Confidence 44899999999999999999999999966 6899999999962 34556666666543 468877644 3567
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
+..+|+.||++|+||.+|+||++++|||++|+|||+++.||+.|++.++.+|+++ + |+++++++|.++
T Consensus 309 ~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~l 376 (416)
T 2x6q_A 309 VNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLYL 376 (416)
T ss_dssp HHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999999999999999986 5 999999999999
Q ss_pred HHhhCHHHHHHHHHHH---HHhhCCchHHHHHHHHHHHHHH
Q 007300 548 LATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 548 l~~~~~~~~~~~~~~~---~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
+++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 377 l~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 377 LKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 997 66666666655 4578999999999999998765
No 11
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=4.6e-38 Score=331.70 Aligned_cols=362 Identities=16% Similarity=0.165 Sum_probs=256.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++++..++| .||.+.++.+|+++|+++||+|+++++...... ..|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--------------------------~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGDC--------------------------PKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSCC--------------------------CTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCCC--------------------------CCCcEE
Confidence 899999998777 599999999999999999999999997632110 125555
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+.+..+.+. +..++..+...+.+.++.. +||+| |+|.+.......+.
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~----------~~Dvv-~~~~~~~~~~~~~~ 98 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH----------PADRV-VGFNKMPGLDVYFA 98 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS----------CCSEE-EESSCCTTCSEEEC
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc----------CCCEE-EEecCCCCceeeec
Confidence 554322111 1112223334444444443 59999 88865432210000
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhh--cCCEEEeeC
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVLTVS 322 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~vi~vS 322 (609)
.. ...++.+.+.|+... .+... ......+.+..+. .+|.++++|
T Consensus 99 ~~-------~~~~~~~~~~~~~~~----------------~~~~~-----------~~~~~~~~~~~~~~~~~d~ii~~s 144 (374)
T 2iw1_A 99 AD-------VCYAEKVAQEKGFLY----------------RLTSR-----------YRHYAAFERATFEQGKSTKLMMLT 144 (374)
T ss_dssp CS-------CCHHHHHHHHCCHHH----------------HTSHH-----------HHHHHHHHHHHHSTTCCCEEEESC
T ss_pred cc-------cccceeeeecccchh----------------hhcHH-----------HHHHHHHHHHHhhccCCcEEEEcC
Confidence 00 012222222232110 00000 0001122333343 699999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+. +|++.+ ++.+||||+|.+.|.+... ...+..+++++|++.+ .++
T Consensus 145 ~~~~~~~~~~--~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~~--~~~ 198 (374)
T 2iw1_A 145 DKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKEQ--QNL 198 (374)
T ss_dssp HHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCTT--CEE
T ss_pred HHHHHHHHHH--hCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCCC--CeE
Confidence 9999998852 455544 8999999999988866431 1235678899998754 489
Q ss_pred EEEEeccccccCHHHHHHHHhhccc---CCeEEEEEeCCChhhHHHHHHHHHhCC--CceEEEeecChHHHHHHHHhCcE
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. .+++..+|+.||+
T Consensus 199 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 273 (374)
T 2iw1_A 199 LLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAADL 273 (374)
T ss_dssp EEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHCSE
T ss_pred EEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHhcCE
Confidence 9999999999999999999999965 4899999999863 34555555443 46777664 3556789999999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCC-CCCHHHHHHHHHHHHHhhCHHHH
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGTQAL 556 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~-~~d~~~la~~I~~ll~~~~~~~~ 556 (609)
+++||.+|+||++++|||++|+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ ++.+
T Consensus 274 ~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~~~~ 341 (374)
T 2iw1_A 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--SPLR 341 (374)
T ss_dssp EEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--HHHH
T ss_pred EEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--hHHH
Confidence 999999999999999999999999999999999999999999987 6 88999999999999997 6677
Q ss_pred HHHHHHHH--HhhCCchHHHHHHHHHHHHHH
Q 007300 557 AEMMKNGM--AQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 557 ~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~ 585 (609)
.++++++. .++++|+..++++.++++..+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 342 MAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 77777663 467899999999999998654
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.5e-37 Score=324.65 Aligned_cols=316 Identities=16% Similarity=0.108 Sum_probs=246.2
Q ss_pred CCCceEEEEEee--------c---CCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEe
Q 007300 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (609)
Q Consensus 82 ~~~MkIl~vs~~--------~---~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (609)
|+.|||++|+.. + +| ...||.+.++.+|+++|.++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 556999999998 3 34 346999999999999999999999999987432111
Q ss_pred eEEEEEeeEcCeeEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEE
Q 007300 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVF 230 (609)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~ 230 (609)
++++++.. +. + . .+.+.++.. +||+|
T Consensus 63 ---------~~~~~~~~--~~---------------------~----~-------~l~~~l~~~----------~~Dvi- 88 (342)
T 2iuy_A 63 ---------PGLTVVPA--GE---------------------P----E-------EIERWLRTA----------DVDVV- 88 (342)
T ss_dssp ---------TTEEECSC--CS---------------------H----H-------HHHHHHHHC----------CCSEE-
T ss_pred ---------CcceeccC--Cc---------------------H----H-------HHHHHHHhc----------CCCEE-
Confidence 12221100 00 0 0 222333333 59999
Q ss_pred EecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHH
Q 007300 231 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 310 (609)
Q Consensus 231 h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 310 (609)
|+|.+...... .. ..++| |+++|+.....
T Consensus 89 ~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~---------------------------------------- 117 (342)
T 2iuy_A 89 HDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP---------------------------------------- 117 (342)
T ss_dssp EECSSSSSCST---TC-------CTTCE-EEEEECSSSBC----------------------------------------
T ss_pred EECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc----------------------------------------
Confidence 99976654332 11 15889 99999754310
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
..+|.++++|+..++.+.+ . .++.+||||+|.+.|.+...
T Consensus 118 --~~~d~ii~~S~~~~~~~~~-------~------~~~~vi~ngvd~~~~~~~~~------------------------- 157 (342)
T 2iuy_A 118 --VNPVGCTYSSRAQRAHCGG-------G------DDAPVIPIPVDPARYRSAAD------------------------- 157 (342)
T ss_dssp --SCCTTEEESCHHHHHHTTC-------C------TTSCBCCCCBCGGGSCCSTT-------------------------
T ss_pred --ccceEEEEcCHHHHHHHhc-------C------CceEEEcCCCChhhcCcccc-------------------------
Confidence 0199999999999998874 1 28899999999988876531
Q ss_pred HhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHH
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 470 (609)
.. .+.++|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+++..
T Consensus 158 --~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 158 --QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp --CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred --cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 01 1346899999999999999999999998 89999999997 66677777766667798888888888889
Q ss_pred HHHhCcEEEecCC----------CCCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEecccccccccCCCCCHH
Q 007300 471 IIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVA 538 (609)
Q Consensus 471 ~l~~aDv~v~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~~~~~~~~~v~~~d~~ 538 (609)
+|+.||++++||. .|+||++++|||++|+|||+|+.||+.|++.+ +.+|+++ ++ |++
T Consensus 228 ~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d~~ 296 (342)
T 2iuy_A 228 LLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-APD 296 (342)
T ss_dssp HHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-CHH
T ss_pred HHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-CHH
Confidence 9999999999999 79999999999999999999999999999999 9999976 88 999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHcC
Q 007300 539 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 539 ~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++++|.++++ .+.+++.+.++|||+.++++|+++|++++...
T Consensus 297 ~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 297 EARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999876 33445556789999999999999999998654
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=4.7e-37 Score=327.66 Aligned_cols=363 Identities=18% Similarity=0.197 Sum_probs=261.8
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCe
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (609)
+.|||++++..++|. .||.+.++..|+++|+++||+|+++++...... ...... ..|
T Consensus 19 ~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~------------------~~~- 75 (406)
T 2gek_A 19 SHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYVV------------------SGG- 75 (406)
T ss_dssp --CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTEE------------------ECC-
T ss_pred CcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCcccc------------------cCC-
Confidence 459999999876553 699999999999999999999999998744220 000000 001
Q ss_pred eEEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHH
Q 007300 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPC 242 (609)
Q Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~ 242 (609)
+++.+....... ... +. ..+...+.+.++.. +||+| |+|.+.......
T Consensus 76 ~~~~~~~~~~~~--------~~~-------~~------~~~~~~l~~~l~~~----------~~Dii-~~~~~~~~~~~~ 123 (406)
T 2gek_A 76 KAVPIPYNGSVA--------RLR-------FG------PATHRKVKKWIAEG----------DFDVL-HIHEPNAPSLSM 123 (406)
T ss_dssp CCC---------------------------CC------HHHHHHHHHHHHHH----------CCSEE-EEECCCSSSHHH
T ss_pred cEEeccccCCcc--------ccc-------cc------HHHHHHHHHHHHhc----------CCCEE-EECCccchHHHH
Confidence 111110000000 000 00 01223334444443 49999 888776655544
Q ss_pred HHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeC
Q 007300 243 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 322 (609)
Q Consensus 243 ~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 322 (609)
.+... .++|+|+++|+...... ... ....+++..++.+|.++++|
T Consensus 124 ~~~~~-------~~~~~i~~~h~~~~~~~--------------~~~--------------~~~~~~~~~~~~~d~ii~~s 168 (406)
T 2gek_A 124 LALQA-------AEGPIVATFHTSTTKSL--------------TLS--------------VFQGILRPYHEKIIGRIAVS 168 (406)
T ss_dssp HHHHH-------EESSEEEEECCCCCSHH--------------HHH--------------HHHSTTHHHHTTCSEEEESS
T ss_pred HHHHh-------cCCCEEEEEcCcchhhh--------------hHH--------------HHHHHHHHHHhhCCEEEECC
Confidence 44433 48999999997432110 000 01122235678999999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+. ++. .++ +||||+|...+.+.... .+++. +.++
T Consensus 169 ~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~~--~~~~ 210 (406)
T 2gek_A 169 DLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYPR--EGRT 210 (406)
T ss_dssp HHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCSC--SSCE
T ss_pred HHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhccC--CCeE
Confidence 9999998752 222 278 99999998777554311 11221 4479
Q ss_pred EEEEecc-ccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 403 IGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 403 i~~iGrl-~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
|+|+||+ .+.||++.+++|+..+.+ ++++|+|+|+|+. +.++++..++.+++.+.+..+.+++..+|+.||++|
T Consensus 211 i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 287 (406)
T 2gek_A 211 VLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYC 287 (406)
T ss_dssp EEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEE
T ss_pred EEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEE
Confidence 9999999 999999999999999976 6899999999983 666666665556788888778888889999999999
Q ss_pred ecCC-CCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007300 480 IPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 558 (609)
Q Consensus 480 ~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~ 558 (609)
+||. .|+||++++|||++|+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 288 ~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~ 355 (406)
T 2gek_A 288 APHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED--DQLRAG 355 (406)
T ss_dssp ECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--HHHHHH
T ss_pred ecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHHH
Confidence 9996 899999999999999999999999999999999999987 999999999999999997 666666
Q ss_pred HHHHHH--HhhCCchHHHHHHHHHHHHHHHcC
Q 007300 559 MMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 559 ~~~~~~--~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
+++++. .+.|||+.++++|+++|++++...
T Consensus 356 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 356 YVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp HHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 666552 348999999999999999998654
No 14
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=7.2e-37 Score=327.79 Aligned_cols=357 Identities=15% Similarity=0.137 Sum_probs=255.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCeeE
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (609)
|||++|++.+ |. .||.+.++..|+++|+++ |+|+|++........ .. ....
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~-~~------------------------~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV-HA------------------------NIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS-CS------------------------SSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc-cc------------------------cccc
Confidence 9999999875 53 699999999999999999 999999976321000 00 0000
Q ss_pred EEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHH
Q 007300 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYL 244 (609)
Q Consensus 165 ~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l 244 (609)
+ +.. ....+ ..+.+.. + ....+.+.++.. +||+| |+|.|.....+.+.
T Consensus 52 ~--~~~-~~~~~------~~~~~~~---~---------~~~~l~~~l~~~----------~~Div-~~~~~~~~~~~~~~ 99 (413)
T 3oy2_A 52 F--DAQ-TAEHV------RGLNEQG---F---------YYSGLSEFIDVH----------KPDIV-MIYNDPIVIGNYLL 99 (413)
T ss_dssp E--EHH-HHHHH------TTCCSTT---C---------CHHHHHHHHHHH----------CCSEE-EEEECHHHHHHHHH
T ss_pred C--Ccc-ccccc------ccccccc---c---------hHHHHHHHHHhc----------CCCEE-EEcchHHHHHHHHH
Confidence 0 000 00000 0010000 0 111122233333 59999 99965554433333
Q ss_pred HHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCC--EEEeeC
Q 007300 245 KTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVLTVS 322 (609)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~vi~vS 322 (609)
+ ..+ +....+++...|+..... ...++..++.+| .++++|
T Consensus 100 ~-~~~---~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~ii~~S 141 (413)
T 3oy2_A 100 A-MGK---CSHRTKIVLYVDLVSKNI----------------------------------RENLWWIFSHPKVVGVMAMS 141 (413)
T ss_dssp H-GGG---CCSCCEEEEEECCCSBSC----------------------------------CGGGGGGGGCTTEEEEEESS
T ss_pred H-hcc---CCCCCceeeeccccchhh----------------------------------HHHHHHHHhccCCceEEEcC
Confidence 2 211 101345666666432200 011245678888 999999
Q ss_pred HHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcE
Q 007300 323 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 402 (609)
Q Consensus 323 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~ 402 (609)
+..++.+.+ +|. .. ++.+||||+|.+.|. ..+++++++.+.+.++
T Consensus 142 ~~~~~~~~~---~~~-~~------~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~~~~ 186 (413)
T 3oy2_A 142 KCWISDICN---YGC-KV------PINIVSHFVDTKTIY-------------------------DARKLVGLSEYNDDVL 186 (413)
T ss_dssp THHHHHHHH---TTC-CS------CEEECCCCCCCCCCT-------------------------THHHHTTCGGGTTSEE
T ss_pred HHHHHHHHH---cCC-CC------ceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccCceE
Confidence 999999987 554 22 899999999988772 1356677775445689
Q ss_pred EEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChh----hHHHHHHHHHhCC--Cc-------eEEEeecChHH
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFNIPL 467 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-------v~~~~~~~~~~ 467 (609)
|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+.. +++.++++..+++ ++ +.+.+..+.++
T Consensus 187 il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 187 FLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp EECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred EEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 9999999999999999999999865 68999999998743 4577777776654 33 44445567888
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcc---------------ee--Eecccccccc
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSVDCE 530 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~---------------G~--l~~~~~~~~~ 530 (609)
+..+|+.||++|+||.+|+||++++|||++|+|||+|+.||+.|++.++.+ |+ ++
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~-------- 338 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE-------- 338 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE--------
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee--------
Confidence 989999999999999999999999999999999999999999999999887 88 87
Q ss_pred cCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhhCCchHHHHHHHHHHHHHHHcC
Q 007300 531 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 588 (609)
Q Consensus 531 ~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~~---~~~fs~~~~a~~~~~~~~~l~~~~ 588 (609)
++.|+++++++| +++++ ++.+.++++++. .++|||+.++++|+++|++++...
T Consensus 339 --~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 339 --GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp --EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred --CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 889999999999 99987 666677766653 478999999999999999998754
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=5.8e-35 Score=319.78 Aligned_cols=343 Identities=16% Similarity=0.184 Sum_probs=238.5
Q ss_pred CcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCcc----
Q 007300 193 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY---- 268 (609)
Q Consensus 193 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~---- 268 (609)
+.+...+|.+++.++++.+..+... +|||+ |+|||++++++.+++..+ .++|+|||+|+..+
T Consensus 156 ~~dd~~~F~y~~~avl~~l~~~~~~-------~pdIi-H~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~l 221 (725)
T 3nb0_A 156 ETNDAILLGYTVAWFLGEVAHLDSQ-------HAIVA-HFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYL 221 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCS-------EEEEE-EEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCC-------CCcEE-EeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhh
Confidence 5568899999999999998776412 48998 999999999999999764 69999999999853
Q ss_pred --CCcccc-ccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhcc
Q 007300 269 --QGRFAF-EDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK 345 (609)
Q Consensus 269 --~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~ 345 (609)
||.++. ..+..++++..... .-.....++++.++..||.|+|||+.+++++... ++.+.+
T Consensus 222 agqg~~~~y~~L~~~~~d~ea~~----------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~L--l~r~~d----- 284 (725)
T 3nb0_A 222 CASGSFDFYNCLESVDVDHEAGR----------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEHL--LKRKPD----- 284 (725)
T ss_dssp TSSSCSCHHHHGGGCCHHHHHHH----------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--TSSCCS-----
T ss_pred hhcCCCchhhhhhhcCCChhhhh----------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHH--hcCCCC-----
Confidence 333221 11122222211000 0012356889999999999999999999999862 343332
Q ss_pred CCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHh------CCCCC-CCCcEEEEEeccc-cccCHHH
Q 007300 346 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDI 417 (609)
Q Consensus 346 ~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------gl~~~-~~~~~i~~iGrl~-~~Kg~~~ 417 (609)
.+ ||||+|+..|+|... ....+...|..+++.+ |++.+ ++.++|+.+||++ ++||+|.
T Consensus 285 -~i--IpNGID~~~f~p~~~-----------~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl 350 (725)
T 3nb0_A 285 -GI--LPNGLNVIKFQAFHE-----------FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM 350 (725)
T ss_dssp -EE--CCCCBCCCCCSSTTH-----------HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH
T ss_pred -EE--EcCCccccccCcchh-----------hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH
Confidence 33 999999999988521 1122344455555543 44443 3446666789999 7999999
Q ss_pred HHHHHhhccc---------CCeEEEEEeCCChhh--------------HHH-----------------------------
Q 007300 418 LAAAIPHFIK---------ENVQIIVLGTGKKPM--------------EKQ----------------------------- 445 (609)
Q Consensus 418 ll~a~~~l~~---------~~~~lvivG~g~~~~--------------~~~----------------------------- 445 (609)
+++|+.+|.. .-+.|+|+..+...+ .+.
T Consensus 351 ~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 430 (725)
T 3nb0_A 351 FIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELP 430 (725)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSC
T ss_pred HHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCC
Confidence 9999999863 136677876653110 000
Q ss_pred ------------------------------------------------HHHHHHhC--CC--ceEEEeecC-hH------
Q 007300 446 ------------------------------------------------LEQLEILY--PE--KARGVAKFN-IP------ 466 (609)
Q Consensus 446 ------------------------------------------------l~~l~~~~--~~--~v~~~~~~~-~~------ 466 (609)
++++.... .+ ++.++..|. ..
T Consensus 431 ~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~ 510 (725)
T 3nb0_A 431 TDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGL 510 (725)
T ss_dssp CCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCC
T ss_pred CCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchh
Confidence 00000000 01 245555552 22
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC-------cceeEecccccccccCCCCCHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~-------~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
+...+|++||++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++.. -++.|+++
T Consensus 511 d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~-------rd~~d~ee 583 (725)
T 3nb0_A 511 DYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVD-------RRFKAPDE 583 (725)
T ss_dssp CHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEEC-------CSSSCHHH
T ss_pred HHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeC-------CCCCCHHH
Confidence 36679999999999999999999999999999999999999999999876 37987500 03567777
Q ss_pred HHHHHHHHHHhh---CHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 540 VSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 540 la~~I~~ll~~~---~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
++++|.+++... +...+.++++++ +++.|||+.++++|+++|++++..
T Consensus 584 ~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 584 SVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 777777776532 245556666655 467899999999999999999864
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=7e-33 Score=297.44 Aligned_cols=358 Identities=11% Similarity=0.071 Sum_probs=229.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (609)
.++|||++++..|.|....||.. .+.+|+++|+++||+|+|+|+........ . ....+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~---~------------------~~~~~ 101 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKD---L------------------QSFKS 101 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHH---H------------------GGGTT
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHH---H------------------Hhhhc
Confidence 56799999999988842346664 68899999999999999999873210000 0 00000
Q ss_pred eeEEEEeCcc-hhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchH
Q 007300 162 VDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLI 240 (609)
Q Consensus 162 v~~~~v~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~ 240 (609)
.....+.... +.. .+.. +. . .....+.. .+||+| |+|.|.++..
T Consensus 102 ~~~~~~~~~~~~~~--------~i~~------~~----------~---~~~~~~~~-------~~~Dvv-~a~~~~~~~~ 146 (413)
T 2x0d_A 102 FKYVMPEEDKDFAL--------QIVP------FN----------D---RYNRTIPV-------AKHDIF-IATAWWTAYA 146 (413)
T ss_dssp SEECCTTCCCCCSE--------EEEE------CS----------C---CTTCCEEE-------CTTEEE-EECSHHHHHH
T ss_pred cceeeccCCccccc--------eeee------cc----------c---cccccccC-------CCCCEE-EEehHHHHHH
Confidence 0000000000 000 0000 00 0 00000001 158999 9998877655
Q ss_pred HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCC--EE
Q 007300 241 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MV 318 (609)
Q Consensus 241 ~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~v 318 (609)
...+.............|.++.+|+..+. +. + ......+.+..+..++ .+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~---------~-----------------~~~~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 147 AQRIVSWQSDTYGIPPNKILYIIQDFEPG--FY---------Q-----------------WSSQYVLAESTYKYRGPQIA 198 (413)
T ss_dssp HHHHHHHHHHHHTCCCCCEEEEECSCGGG--GS---------C-----------------SSHHHHHHHHTTSCCSCEEE
T ss_pred HHHhhhhhhhhcccccCcEEEEEeechhh--cC---------c-----------------cChHHHHHHHHhccCCceEE
Confidence 44331100000000356788888864320 00 0 0001123344555555 58
Q ss_pred EeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCC
Q 007300 319 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 398 (609)
Q Consensus 319 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~ 398 (609)
+++|+..++.+.+ .|++.. ++.+|+||+|.+.|.+.. .+ .+
T Consensus 199 i~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~---------------------------~~---~~ 239 (413)
T 2x0d_A 199 VFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN---------------------------DK---RQ 239 (413)
T ss_dssp EEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT---------------------------SC---CC
T ss_pred EEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc---------------------------cc---cC
Confidence 9999999999986 344322 688999999876543321 01 12
Q ss_pred CCcEEEEEecc-ccccCHHHHHHHHhhccc--C---CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 399 NIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 399 ~~~~i~~iGrl-~~~Kg~~~ll~a~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
+.+.++++||+ .+.||++.+++|+..+.+ + +++|+++|+|... .++ ....++.+.+..+.+++..+|
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~~~~l~~~~ 312 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLTLEDYADLL 312 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCCHHHHHHHH
T ss_pred CCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCCHHHHHHHH
Confidence 34688999996 689999999999999865 4 3899999998732 011 123467888777889999999
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++++++|.+++++++
T Consensus 313 ~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 313 KRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp HHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHHHHHHHHTC
T ss_pred HhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHHHHHHcCHH
Confidence 99999999999999999999999999999995 56778999999999987 99999999999999999843
Q ss_pred HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 553 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 553 ~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
. +.+.++ ...+.|||+...++ .+.|+++.
T Consensus 382 ~--~~~~~~-~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 382 N--RDVDKK-ESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp ----------CCBSCGGGCCCC----TTHHHHH
T ss_pred H--HHHhHH-HHHHhCCHHHHHHH-HHHHHHHH
Confidence 2 222122 22468999999888 77777765
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.97 E-value=3.3e-30 Score=276.22 Aligned_cols=204 Identities=15% Similarity=0.104 Sum_probs=164.7
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHH
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 384 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 384 (609)
..+++..++.+|.|+++|+..++.+.+ .+ ++.+||||+|.+.|.+...
T Consensus 169 ~~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~------------------- 216 (406)
T 2hy7_A 169 EREFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDP------------------- 216 (406)
T ss_dssp HHHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCS-------------------
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCcccc-------------------
Confidence 356677899999999999999988764 22 7899999999887754311
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 464 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 464 (609)
.+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ ++++ ...++|.+.+..+
T Consensus 217 ---------~~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 217 ---------SP-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMK 274 (406)
T ss_dssp ---------CS-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCC
T ss_pred ---------cc-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCC
Confidence 01 1233799999999999998 4444332 2789999999986 1111 2345788888888
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccccccCcceeE-ecccccccccCCCCC
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVD 536 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~i~~~~~G~l-~~~~~~~~~~v~~~d 536 (609)
.+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d 338 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGN 338 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTC
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCC
Confidence 8888999999999999999999999999999 99999999987 677889998 7 9999
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHH--HHHHHHc
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEVA 587 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~--~~~l~~~ 587 (609)
+++++++|.++++++. . ...+.|||+.++++++++ |.++...
T Consensus 339 ~~~la~ai~~ll~~~~--------~-~~~~~~sw~~~a~~~~~~~~y~~~~~~ 382 (406)
T 2hy7_A 339 ADSVIAAITQALEAPR--------V-RYRQCLNWSDTTDRVLDPRAYPETRLY 382 (406)
T ss_dssp HHHHHHHHHHHHHCCC--------C-CCSCCCBHHHHHHHHHCGGGSGGGBSS
T ss_pred HHHHHHHHHHHHhCcc--------h-hhhhcCCHHHHHHHHHHhhcccccCcC
Confidence 9999999999999854 1 235789999999999999 8877643
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.97 E-value=7.4e-29 Score=260.74 Aligned_cols=339 Identities=16% Similarity=0.015 Sum_probs=226.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCccccCCCceEEEEEeCCEEeeEEEEEeeEcCee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (609)
.|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 489999973 2 588888899999999999999999998642111100 112444
Q ss_pred EEEEeCcchhhhhcCCCCCeeccCCCCCCCcchHHHHHHHHHHHHHhhhhhccCCCCCCCCCCceEEEecccccchHHHH
Q 007300 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYDVVFVANDWHTSLIPCY 243 (609)
Q Consensus 164 ~~~v~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~pDvV~h~h~~~~~~~~~~ 243 (609)
++.+..+.+..+ .... ......++......+.+.++.. +||+| |+|..........
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~----------~pDvv-~~~~~~~~~~~~~ 113 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY----------KPDVV-LGMGGYVSGPGGL 113 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH----------CCSEE-EECSSTTHHHHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc----------CCCEE-EEeCCcCchHHHH
Confidence 444432211000 0000 0001111122233344444444 59999 8886443333333
Q ss_pred HHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchhHHHHHHhhcCCEEEeeCH
Q 007300 244 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 323 (609)
Q Consensus 244 l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 323 (609)
+... .++|++++.|+... + ...+...+.+|.+++.++
T Consensus 114 ~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~~~ 150 (364)
T 1f0k_A 114 AAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQAFP 150 (364)
T ss_dssp HHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEESST
T ss_pred HHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEecCh
Confidence 3332 58999999986321 0 012334567999998876
Q ss_pred HHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCc-E
Q 007300 324 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP-V 402 (609)
Q Consensus 324 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~-~ 402 (609)
.. + + ++.+|+||+|...+.+.. .+++++++. +.+ +
T Consensus 151 ~~---------~--~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~~i 186 (364)
T 1f0k_A 151 GA---------F--P--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPVRV 186 (364)
T ss_dssp TS---------S--S--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSEEE
T ss_pred hh---------c--C--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCcEE
Confidence 43 1 1 577999999877665431 134556543 335 4
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeE-EEEEeCCChhhHHHHHHHHHhCC-CceEEEeecChHHHHHHHHhCcEEEe
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
+++.|++.+.||.+.+++|+..+.+ +++ ++++|+|+ . +.++++..+++ .++.+.+.. +++..+|+.||++|+
T Consensus 187 l~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 187 LVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVVVC 260 (364)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEEEE
T ss_pred EEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEEEE
Confidence 5566799999999999999999966 788 56788887 2 55666665554 357766544 456679999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cccccCcceeEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~i~~~~~G~l~~~~~~~~~~v~~~d--~~~la~~I~~ll~~ 550 (609)
||. |++++|||++|+|||+++.+|.. +++.++ .|+++ +++| +++++++|.++ +
T Consensus 261 ~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l--~ 323 (364)
T 1f0k_A 261 RSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW--S 323 (364)
T ss_dssp CCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC--C
T ss_pred CCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc--C
Confidence 994 99999999999999999999874 355555 59976 8888 99999999998 4
Q ss_pred hCHHHHHHHHHHHH--HhhCCchHHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 551 ~~~~~~~~~~~~~~--~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
++.+.++++++. .+.|+|+.++++++++|++..+
T Consensus 324 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 324 --RETLLTMAERARAASIPDATERVANEVSRVARALEH 359 (364)
T ss_dssp --HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC--
T ss_pred --HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHh
Confidence 667777776663 4689999999999999987653
No 19
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.96 E-value=3e-28 Score=270.82 Aligned_cols=366 Identities=16% Similarity=0.178 Sum_probs=265.6
Q ss_pred HHHHHHHHHh-hhhhccCCCCC-CCCCCceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCC
Q 007300 201 SLLCQAALEA-PRILNLNSNKY-FSGPYDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQG 270 (609)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~-~~~~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~ 270 (609)
.+|+.+.++. ++.+......+ ..++||+| |+||||+++++. +++..+...++ + .+..++||+|++.++|
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~~~~l~~p~vi-HlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~eg 351 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRKLHELADYEVI-QLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEA 351 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGHHHHEEE-EEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhcCCccEE-EecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhh
Confidence 4677787775 55331000000 00148998 999999999888 66544311111 1 4788999999999998
Q ss_pred c--cccccccccC---------Cccccccc-----------cccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHH
Q 007300 271 R--FAFEDFGLLN---------LPAQFKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQE 328 (609)
Q Consensus 271 ~--~~~~~~~~l~---------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~ 328 (609)
. |+.+.+..+- ++.+|... +.. .+. .....+++++.++..|+.|.+||+.+.+.
T Consensus 352 le~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i---~~~~~vnMa~lai~~S~~VNgVS~lH~e~ 427 (796)
T 1l5w_A 352 LERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAV---VHDKQVHMANLCVVGGFAVNGVAALHSDL 427 (796)
T ss_dssp SCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCS---EETTEEEHHHHHHHHSSEEEESSHHHHHH
T ss_pred hhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhh-hhc---ccCCcccHHHHHHHhcCccccccHHHHHH
Confidence 5 5554443211 11111000 000 001 11236789999999999999999999999
Q ss_pred HhcccCCCccchhhhccCCeeEecCCCCCCCc----CCCCccccccccC----------------cch------hcccch
Q 007300 329 LVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST------VMDAKP 382 (609)
Q Consensus 329 l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~----~p~~~~~~~~~~~----------------~~~------~~~~~~ 382 (609)
++.. .++ ... .+.+.++..|.||||...| +|..++.+...|+ .++ +...|.
T Consensus 428 ik~~-~f~-~~~-~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~ 504 (796)
T 1l5w_A 428 VVKD-LFP-EYH-QLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQ 504 (796)
T ss_dssp HHHT-TSH-HHH-HHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHH
T ss_pred HHhH-Hhh-HHH-HhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 9852 222 110 1233489999999999999 7777766666665 333 446777
Q ss_pred HHHHH----HHHHhCCCCCCCCcEEEEEeccccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH---
Q 007300 383 LLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ--- 445 (609)
Q Consensus 383 ~~~~~----~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~--- 445 (609)
.+|.. ++++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|||.|++.+.++..
T Consensus 505 ~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~i 584 (796)
T 1l5w_A 505 ANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNI 584 (796)
T ss_dssp HHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHH
Confidence 77877 589999999999999999999999999999 8888887755 479999999988655544
Q ss_pred ---HHHHHH------hCCC--ceEEEeecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCcccc
Q 007300 446 ---LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDT 512 (609)
Q Consensus 446 ---l~~l~~------~~~~--~v~~~~~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~ 512 (609)
+.+++. +.++ +|.+...|+...++.++++||+++.||+ +|+||++.+-+|.+|++.|++--|...|+
T Consensus 585 Ik~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi 664 (796)
T 1l5w_A 585 IFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEI 664 (796)
T ss_dssp HHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHH
T ss_pred HHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeeh
Confidence 777776 5666 8999999999999999999999999999 89999999999999999999988999988
Q ss_pred ccc--CcceeEecccccccccCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 513 VEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 513 i~~--~~~G~l~~~~~~~~~~v~~~d~~~la---~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... ..|.++|..++.
T Consensus 665 ~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 665 AEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp HHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHHHHHHTST
T ss_pred hhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHHHHHHHhc
Confidence 765 46999994 3 556655 33322222221 247888888889999999986 889999999864
No 20
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.96 E-value=1.3e-28 Score=273.64 Aligned_cols=472 Identities=15% Similarity=0.151 Sum_probs=314.4
Q ss_pred ccchHHHHhhchhHHHHhCCCeEEEEeecCCC-c-------------cccCCC----------ceEEEEEeCCEEeeEEE
Q 007300 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDT----------DVVIELKVGDKIEKVRF 154 (609)
Q Consensus 99 ~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~-~-------------~~~~~~----------~~~~~~~~~~~~~~~~~ 154 (609)
..||+|+......+.++..|....-++..|.. + ++.|.. ...+.+..+++....-.
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 57999999999999999999999999988762 1 111211 22344444554322222
Q ss_pred EEeeEcC-----eeEEE---EeCc-ch-hhh-------------hcC-CCCCeeccCCCCCCCcchHHHH---HHHHHHH
Q 007300 155 FHCHKRG-----VDRVF---VDHP-WF-LAK-------------VWG-KTQSKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (609)
Q Consensus 155 ~~~~~~g-----v~~~~---v~~~-~~-~~~-------------~~~-~~~~~~y~~~~~~~~~~~~~r~---~~~~~~~ 207 (609)
+..+..| +-..+ .... .| +.. .+. ..-..+|+..+. +....+|+ .+|+.+.
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~--~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTT--YEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSS--HHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCCC--cchHHHHHHhHHHHHHHH
Confidence 2222222 11000 0000 01 000 000 001245654321 12234443 4677887
Q ss_pred HHh-hhhhccCC-CCCCCCCCceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCCc--cccc
Q 007300 208 LEA-PRILNLNS-NKYFSGPYDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFE 275 (609)
Q Consensus 208 ~~~-~~~~~~~~-~~~~~~~pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~~--~~~~ 275 (609)
++. ++.+.... +.-..++||+| |+||||+++++. +++..+...++ + .+..++||+|++.++|. |+.+
T Consensus 270 lq~ilr~~~~~~~~l~~l~~p~vi-HlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~ 348 (796)
T 2c4m_A 270 LQAMIQDHLAHHKDLSNFAEFHSV-QLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQ 348 (796)
T ss_dssp HHHHHHHHHHHSSCSTTHHHHEEE-EEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHH
T ss_pred HHHHHHHHHHhCCChhhcCCCeEE-EeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHH
Confidence 775 55331100 00001148998 999999999888 66544211111 1 46789999999999996 5555
Q ss_pred cccccC---------CccccccccccccC------CCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccch
Q 007300 276 DFGLLN---------LPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD 340 (609)
Q Consensus 276 ~~~~l~---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~ 340 (609)
.+..+- ++.++...+....+ .........+++++.++..|+.|.+||+.+.+.++.. .++ ..-
T Consensus 349 l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~-~f~-~~~ 426 (796)
T 2c4m_A 349 IFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE-TLA-DWY 426 (796)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT-TTH-HHH
T ss_pred HHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh-hhh-hHH
Confidence 443211 11111110000000 0001122367999999999999999999999999852 222 110
Q ss_pred hhhccCCeeEecCCCCCCCc----CCCCccccccccC-----------------cch------hcccchHHHHH----HH
Q 007300 341 NIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLKEA----LQ 389 (609)
Q Consensus 341 ~~~~~~~i~vI~nGvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~----~~ 389 (609)
...+.++..|.||||...| +|..++.|...|+ .++ +...|..+|.. ++
T Consensus 427 -~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~ 505 (796)
T 2c4m_A 427 -ALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWIL 505 (796)
T ss_dssp -HHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234489999999999999 7776666665555 333 34677777877 59
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHH-HHHHHhhccc---------CCeEEEEEeCCChhhHHH------HHHHHH--
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------LEQLEI-- 451 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~------l~~l~~-- 451 (609)
++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|||.|++.+.++.. +.+++.
T Consensus 506 ~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~i 585 (796)
T 2c4m_A 506 ERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLV 585 (796)
T ss_dssp HHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 8888887753 379999999998655544 777777
Q ss_pred ----hCCC--ceEEEeecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeE
Q 007300 452 ----LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQ 521 (609)
Q Consensus 452 ----~~~~--~v~~~~~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l 521 (609)
+.++ +|.+...|+...++.++++||+++.||+ +|+||++.+-+|.+|++.|++--|...|+.++ ..|||+
T Consensus 586 n~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~ 665 (796)
T 2c4m_A 586 NNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYI 665 (796)
T ss_dssp HTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEE
T ss_pred ccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEE
Confidence 6777 8999999999999999999999999999 89999999999999999999998999988765 469999
Q ss_pred ecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 522 MGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 522 ~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~-~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
||. ...++.++..+ .+..+-+. .+.++++..+.+...|||... .+|.++|..++.
T Consensus 666 FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 666 FGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp ESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred ecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 942 23667777665 44433221 236777777778899999988 889999999974
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=2.4e-27 Score=258.15 Aligned_cols=295 Identities=15% Similarity=0.119 Sum_probs=208.9
Q ss_pred CCceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCch
Q 007300 225 PYDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 304 (609)
Q Consensus 225 ~pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 304 (609)
++|+| |+|||+..+++.+++... .++|+++++|...+.. ..+.. +| .
T Consensus 123 ~~DiV-~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pfp~~----~~~~~--lp--------------------~ 169 (482)
T 1uqt_A 123 DDDII-WIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNA--LP--------------------T 169 (482)
T ss_dssp TTCEE-EEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTT--ST--------------------T
T ss_pred CCCEE-EEECchHHHHHHHHHHhC------CCCcEEEEEcCCCCCH----HHHhh--Cc--------------------c
Confidence 46999 999999999999888753 5899999999642210 00000 00 1
Q ss_pred hHHHHHHhhcCCEEEeeCHHHHHHHhcccC--CCccc------hhhhccCCeeEecCCCCCCCcCCCCccccccccCcch
Q 007300 305 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 376 (609)
Q Consensus 305 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~------~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~ 376 (609)
...+...+..+|.+.+.+..+.+.+.+... .+.+. ...-+..++.+||||+|.+.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 122334556789988888877776653110 01000 000012378999999998877542100
Q ss_pred hcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C----CeEEEEEeCCC----h---hhH
Q 007300 377 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PME 443 (609)
Q Consensus 377 ~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~----~~~lvivG~g~----~---~~~ 443 (609)
..... ...++++++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 456777776 45899999999999999999999999864 2 58899999632 1 345
Q ss_pred HHHHHHHHhCC--------CceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007300 444 KQLEQLEILYP--------EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 509 (609)
Q Consensus 444 ~~l~~l~~~~~--------~~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 509 (609)
+.+++++.+.+ ..+.++ +..+.+++..+|+.||++++||..|+||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 66666654321 125554 445788888999999999999999999999999999997 8999998888
Q ss_pred ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHH
Q 007300 510 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 584 (609)
Q Consensus 510 ~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l 584 (609)
.+.+. +|+++ +|.|+++++++|.+++++. .+.+.++.+++ ..+.|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88883 78876 9999999999999999862 33444444433 235699999999999999876
No 22
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=2.3e-27 Score=264.77 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=167.4
Q ss_pred cCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhC
Q 007300 314 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 393 (609)
Q Consensus 314 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 393 (609)
.+|.++++|+...+ ++ .++.+|||..+.....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888876433 21 18899999543322111110 112456778
Q ss_pred CCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEe-CCChhhHHHHHHHHHhCC---CceEEEeecChHH
Q 007300 394 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 467 (609)
Q Consensus 394 l~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 467 (609)
++.+ ++++++||+.+ ||++.+++++.++.+ ++++|+|+| +|+ ..+.++++..+++ ++|.+.+..+.++
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8643 35669999999 999999999999854 799999999 776 6677777777654 4688887777778
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccccccCcceeEecccccccccCC
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 533 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~i~~~~~G~l~~~~~~~~~~v~ 533 (609)
+..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |+.|+|.+
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~------------------ 507 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA------------------ 507 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC------------------
Confidence 88899999999999999 999999999999999999 9999 88886632
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhCCchHHHHHHHHHHHHHHHcCCCCC
Q 007300 534 PVDVAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVAGSEPG 592 (609)
Q Consensus 534 ~~d~~~la~~I~~ll~~~~~~~~~~~~~~~---~--~~~fs~~~~a~~~~~~~~~l~~~~~~~~ 592 (609)
|+++++++|.+++++ ++.+.+|++++ + .+.|||+.++++++++|++++......|
T Consensus 508 --~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~~ 567 (568)
T 2vsy_A 508 --DDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHGWLG 567 (568)
T ss_dssp --SHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred --CHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 889999999999998 66666666554 3 3679999999999999999998765443
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=7.4e-27 Score=246.31 Aligned_cols=223 Identities=15% Similarity=0.086 Sum_probs=168.0
Q ss_pred HHHHh-hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHH
Q 007300 308 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 308 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+.... +
T Consensus 143 ~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------~ 195 (375)
T 3beo_A 143 NRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------S 195 (375)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------C
T ss_pred hhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------h
Confidence 34434 4599999999999999886 566555 89999999 786655432100 1
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCC-hhhHHHHHHHHHhCCCceEEEe
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
..+++++ + ++..+++++||+.+. ||++.+++|+.++.+ +++++++ |.|+ ..+.+.++++... .+++.+.+
T Consensus 196 ~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~g 269 (375)
T 3beo_A 196 HPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLIE 269 (375)
T ss_dssp CHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred HHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEeC
Confidence 1233333 2 233578899999876 999999999999865 6888655 6554 3345666665322 24687766
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC-CCCcccccccCcceeEecccccccccCCCCCHHHH
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
.....++..+|+.||++|+|| |.+++|||++|+|||+++ .||..|++.++ +|+++ ++ |++++
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~l 332 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEETI 332 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHHH
Confidence 666667888999999999999 778999999999999996 49999999887 99975 65 99999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHH
Q 007300 541 STTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 541 a~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~ 582 (609)
+++|.+++++ ++.+.+|++++ ..+.|+|+.++++++++++
T Consensus 333 a~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9999999997 67777776654 2457899999988887763
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=8.3e-27 Score=246.90 Aligned_cols=232 Identities=16% Similarity=0.086 Sum_probs=171.1
Q ss_pred hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 312 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 312 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.+.+|.++++|+..++.+.+ +|++.+ ++.+|+||+ |...+.+... ......+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccchhhhHHHHH
Confidence 34599999999999999876 566554 899999995 4221111000 000001235667
Q ss_pred HhC-CCCCCCCcEEEEEeccccc-cCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChH
Q 007300 391 EVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 466 (609)
Q Consensus 391 ~~g-l~~~~~~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 466 (609)
++| ++.+ +..+++++||+.+. ||++.+++|+.++.+ ++++|++++...+.+.+.++++.... +++.+.+.....
T Consensus 197 ~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~-~~v~~~g~~~~~ 274 (384)
T 1vgv_A 197 NYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHV-KNVILIDPQEYL 274 (384)
T ss_dssp TCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTC-TTEEEECCCCHH
T ss_pred hccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcC-CCEEEeCCCCHH
Confidence 777 6432 23578899999876 999999999999865 68999886332234566676664332 457776555556
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC-CCcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
++..+|+.||++|+|| |.+++|||++|+|||+++. ||..|++.++ +|+++ ++ |+++++++|.
T Consensus 275 ~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d~~~la~~i~ 337 (384)
T 1vgv_A 275 PFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-DKQRIVEEVT 337 (384)
T ss_dssp HHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-SHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-CHHHHHHHHH
Confidence 7888999999999999 4458999999999999986 9999999888 99986 66 9999999999
Q ss_pred HHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHH
Q 007300 546 RALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++++ ++.+.+|++++ ..+.|+|+.+++.++++|.++++
T Consensus 338 ~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 338 RLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred HHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 99997 77777777654 34678999999999888877764
No 25
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.94 E-value=2.2e-25 Score=248.71 Aligned_cols=341 Identities=16% Similarity=0.169 Sum_probs=249.8
Q ss_pred CceEEEecccccchHHH-HHHHhhcCCCc-----c--cCceEEEEEecCccCCc--cccccccccC---------Ccccc
Q 007300 226 YDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFGLLN---------LPAQF 286 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~~v~~iH~~~~~~~--~~~~~~~~l~---------~~~~~ 286 (609)
||+| |+||||+++++. +++..+-..++ + ....++||+|++.++|. |+...+..+- ++.+|
T Consensus 321 p~vi-HlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 321 KVAI-QLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HEEE-EEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEE-EccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 6898 999999999888 66554321111 1 24459999999999998 7766554321 11111
Q ss_pred ccc-----------cccccCCCCCcCCchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC
Q 007300 287 KSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM 355 (609)
Q Consensus 287 ~~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv 355 (609)
... +......... ....+++++.++..|+.|.+||+.+.+.+++. .++ +.-. ..+.++..|.|||
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNGI 475 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQNKTNGI 475 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEECCCCB
T ss_pred HHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhcccccCCc
Confidence 000 0000110100 12468999999999999999999999999742 222 1101 1244899999999
Q ss_pred CCCCc----CCCCccccccc-----------------cCc-chhc----ccchHHHHH----HHHHhCCCCCCCCcEEEE
Q 007300 356 DVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVIGF 405 (609)
Q Consensus 356 d~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----~~~~~gl~~~~~~~~i~~ 405 (609)
|...| +|..++.|... |.. .++. ..|..+|.. ++++.|++.+++.+.+++
T Consensus 476 ~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~ 555 (824)
T 2gj4_A 476 TPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQ 555 (824)
T ss_dssp CTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEE
T ss_pred ChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEee
Confidence 99999 67665555433 665 2331 466667766 889999999999999999
Q ss_pred EeccccccCHHHH-HHHHhhcc---c-C-----CeEEEEEeCCChhhHHH------HHHHHHhC------CC--ceEEEe
Q 007300 406 IGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARGVA 461 (609)
Q Consensus 406 iGrl~~~Kg~~~l-l~a~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~v~~~~ 461 (609)
+.|+.++||++++ +..+.++. + + +++|||.|++.+.++.. +.+++... ++ +|.+..
T Consensus 556 vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~ 635 (824)
T 2gj4_A 556 VKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635 (824)
T ss_dssp ESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET
T ss_pred eecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC
Confidence 9999999999998 88888774 2 2 67999999988655544 77777654 45 789999
Q ss_pred ecChHHHHHHHHhCcEEEecCC--CCCCcHHHHHHHHcCCceEEcCCCCcccccc--cCcceeEecccccccccCCCCCH
Q 007300 462 KFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDV 537 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~--~~~~G~l~~~~~~~~~~v~~~d~ 537 (609)
.|+...++.++++||+++.||+ +|+||++.+-||.+|++.|++--|...|+.+ ...|||+|| .. +
T Consensus 636 nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~~-~ 704 (824)
T 2gj4_A 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------MR-V 704 (824)
T ss_dssp TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------CC-H
T ss_pred CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------Cc-H
Confidence 9999999999999999999999 8999999999999999999999898888765 457999984 22 5
Q ss_pred HHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 538 AAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 538 ~~la~~I~-------~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++ ..++ .+.+. .+.++++..+.+...|||... ..|.++|.+++.
T Consensus 705 ~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 705 EDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp HHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred HHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 555 4432 22222 357777788888899999998 889999999874
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.94 E-value=8.3e-25 Score=235.92 Aligned_cols=295 Identities=14% Similarity=0.130 Sum_probs=214.3
Q ss_pred CceEEEecccccchHHHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcCCchh
Q 007300 226 YDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 305 (609)
Q Consensus 226 pDvV~h~h~~~~~~~~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (609)
-|+| ..||+|..++|.+++... ++.++.|.+|-..+.. ..|. -+|.. ..
T Consensus 150 ~D~V-wVhDYhL~llp~~lR~~~------~~~~igfFlHiPfPs~----e~f~--~Lp~~------------------~r 198 (496)
T 3t5t_A 150 DPVY-LVHDYQLVGVPALLREQR------PDAPILLFVHIPWPSA----DYWR--ILPKE------------------IR 198 (496)
T ss_dssp SCEE-EEESGGGTTHHHHHHHHC------TTSCEEEECCSCCCCH----HHHT--TSCHH------------------HH
T ss_pred CCEE-EEeCccHhHHHHHHHhhC------CCCeEEEEEcCCCCCH----HHHh--hCcHh------------------HH
Confidence 5898 999999999999999875 7899999999643211 0000 01100 12
Q ss_pred HHHHHHhhcCCEEEeeCHHHHHHHhcccC--C-Cccch---hh----hccCCeeEecCCCCCCCcCCCCccccccccCcc
Q 007300 306 NWMKAGILESDMVLTVSPHYAQELVSGED--K-GVELD---NI----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 375 (609)
Q Consensus 306 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~-g~~~~---~~----~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~ 375 (609)
..+-.++..+|.|.+.++.+++.+.+... . |.+.+ .. -+..++.++|+|||++.|.+....
T Consensus 199 ~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~--------- 269 (496)
T 3t5t_A 199 TGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ--------- 269 (496)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC---------
T ss_pred HHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH---------
Confidence 34456788999999999999988765221 1 32211 00 122478899999999998765320
Q ss_pred hhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--C---CeEEEEEeCC-----C--hhhH
Q 007300 376 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPME 443 (609)
Q Consensus 376 ~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~---~~~lvivG~g-----~--~~~~ 443 (609)
.+..++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.+ + ..++
T Consensus 270 --------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~ 335 (496)
T 3t5t_A 270 --------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYV 335 (496)
T ss_dssp --------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHH
T ss_pred --------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHH
Confidence 0245677776 458999999999999999999999 7754 4 3678888742 1 2456
Q ss_pred HHHHHHHHhCCC-----ceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcC---CceEEcCCCCccccccc
Q 007300 444 KQLEQLEILYPE-----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVEE 515 (609)
Q Consensus 444 ~~l~~l~~~~~~-----~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~i~~ 515 (609)
++++++..+.+. .|.+.+..+.+++..+|+.||++++||..|+||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 336 ~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~- 414 (496)
T 3t5t_A 336 HRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG- 414 (496)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-
T ss_pred HHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-
Confidence 667776554321 4777766688888899999999999999999999999999997 8999999999998884
Q ss_pred CcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHHHc
Q 007300 516 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 516 ~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+|+++ +|.|++++|++|.++|+++. ++++++.+.. ....+++...++.+++.+......
T Consensus 415 -~~allV----------nP~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 -EYCRSV----------NPFDLVEQAEAISAALAAGP-RQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp -GGSEEE----------CTTBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368876 99999999999999999843 3333333322 357799999999999888877544
No 27
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.94 E-value=2.5e-25 Score=213.63 Aligned_cols=183 Identities=31% Similarity=0.517 Sum_probs=155.6
Q ss_pred EecCCCCCCCcC--CCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccc-cccCHHHHHHHHhhcc
Q 007300 350 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 426 (609)
Q Consensus 350 vI~nGvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~-~~Kg~~~ll~a~~~l~ 426 (609)
.||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++++..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 389999999998 7531 0122356789999987 336999999999 9999999999999995
Q ss_pred --c--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEE-EeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCce
Q 007300 427 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 501 (609)
Q Consensus 427 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~Pv 501 (609)
+ ++++|+|+|.+.+...+.++++..+++ ++.+ .+..+.+.+..+|+.||++++||..|+||++++|||++|+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 4 689999999988667788888888877 7888 777788888899999999999999999999999999999999
Q ss_pred EEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHH
Q 007300 502 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNG 563 (609)
Q Consensus 502 I~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~-~~~~~~~~~~~~~~ 563 (609)
|+++.+|..+++ ++.+|+++ ++.|+++++++|.++++ + ++.+.++++++
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a 192 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENC 192 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHH
Confidence 999999999999 88999987 89999999999999999 7 66777776665
No 28
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.92 E-value=4.3e-24 Score=198.81 Aligned_cols=159 Identities=16% Similarity=0.170 Sum_probs=131.6
Q ss_pred cEEEEEeccccccCHHHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+++..+|+.||+++
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 789999999999999999999999965 689999999987 567777777777666666 6667788889999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 557 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~~~~ 557 (609)
+||.+|+||++++|||++|+ |||+ ++.|+..+++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568899999998766 33 899999999999999997 66666
Q ss_pred HHHHHH--HHhhCCchHHHHH
Q 007300 558 EMMKNG--MAQDLSWKGPAKK 576 (609)
Q Consensus 558 ~~~~~~--~~~~fs~~~~a~~ 576 (609)
++++++ ..++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 666655 2488999998764
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.90 E-value=8e-22 Score=208.13 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=162.6
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
....+|.++++|+..++.+.+ .|++.+ ++.+|+|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHH
Confidence 345699999999999999986 576655 899999964 32111000 00011
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChH
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIP 466 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 466 (609)
+++ + ++.++++++||+...||++.+++|+..+.+ ++++++++ |++. ...+.++++... .+++.+.+.....
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 233577889999888999999999999865 68898886 6553 355666666433 2367776555555
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
++..+|+.||++|.|| | |+ ++|||++|+|||++ +.+|..+++.++ +|+++ + .|+++++++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHH
Confidence 6778999999999999 2 44 88999999999998 578888987665 78874 4 59999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 546 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 546 ~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++++ ++.+++|+++ .+.|++...++++.+.+.+++.
T Consensus 330 ~ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 99987 7777788753 4678888999999999998875
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.86 E-value=7.1e-21 Score=179.53 Aligned_cols=142 Identities=16% Similarity=0.203 Sum_probs=125.6
Q ss_pred CCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCCh--hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 398 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 398 ~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.+.++|+|+|++.+.||++.+++|+..+ ++++|+|+|.++. .+++.++++....++++.+.+..+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 3558999999999999999999999999 6899999999873 45555554444566679988888888899999999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 552 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~ 552 (609)
|++++||..|+||++++|||++|+|||+++.|+..|++.++.+|++ + +.|+++++++|.++++++.
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCTT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCHH
Confidence 9999999999999999999999999999999999999999999996 4 7899999999999998843
No 31
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.84 E-value=3.4e-20 Score=196.22 Aligned_cols=202 Identities=13% Similarity=0.043 Sum_probs=144.6
Q ss_pred HHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHH
Q 007300 307 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 386 (609)
Q Consensus 307 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 386 (609)
+++..++.+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 5566788999999999999999986 4543 688999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCce-------
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------- 457 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v------- 457 (609)
+. .+ ..+++++.|+ ..||.+.+++|++++.+ ++++|+|+|+|+. ..+.++++..+.+...
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777665 46899999999999865 6899999998863 2245666665554221
Q ss_pred --EEEeecChHHHHHHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccccccC-cceeEecccccccccC
Q 007300 458 --RGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEAV 532 (609)
Q Consensus 458 --~~~~~~~~~~~~~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~-~~G~l~~~~~~~~~~v 532 (609)
..+..+ .+++..+|+.||++++||.+ |.+|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~~~~-~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~---------- 328 (374)
T 2xci_A 260 GDVILVDR-FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF---------- 328 (374)
T ss_dssp SSEEECCS-SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE----------
T ss_pred CcEEEECC-HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE----------
Confidence 122222 24567799999998888765 67899999999999999985 789999988763 477776
Q ss_pred CCCCHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHh
Q 007300 533 DPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQ 566 (609)
Q Consensus 533 ~~~d~~~la~~I~~ll~~~~~-~~~~~~~~~~~~~ 566 (609)
.++|+++|+++|.+++++ +. ..+.+.+++.+.+
T Consensus 329 ~~~d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 329 EVKNETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp ECCSHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 789999999999999986 43 3444444443333
No 32
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.82 E-value=2e-18 Score=179.49 Aligned_cols=244 Identities=16% Similarity=0.085 Sum_probs=167.2
Q ss_pred CCceEEEecc--cccchH-HHHHHHhhcCCCcccCceEEEEEecCccCCccccccccccCCccccccccccccCCCCCcC
Q 007300 225 PYDVVFVAND--WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 301 (609)
Q Consensus 225 ~pDvV~h~h~--~~~~~~-~~~l~~~~~~~~~~~~~~~v~~iH~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 301 (609)
++|+| +.+. |+.... ..+++...+ .++|+++++||+.+.. +. ..
T Consensus 74 ~~DvI-i~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~----------~~---------------- 120 (339)
T 3rhz_A 74 HGDVV-IFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS----------GN---------------- 120 (339)
T ss_dssp TTCEE-EEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG----------GG----------------
T ss_pred CCCEE-EEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc----------cc----------------
Confidence 68999 5532 222222 344444321 4899999999876521 10 00
Q ss_pred CchhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccc
Q 007300 302 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 381 (609)
Q Consensus 302 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~ 381 (609)
......++..++.||.|+++|+.+++.+.+ .|++.. ++..+++. |.. .+..
T Consensus 121 ~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~~-~~~--~~~~----------------- 171 (339)
T 3rhz_A 121 FYLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGMW-DHP--TQAP----------------- 171 (339)
T ss_dssp GGGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCSC-CCC--CCCC-----------------
T ss_pred hhhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCCC-Ccc--Cccc-----------------
Confidence 012346788899999999999999999987 566533 55433332 211 0000
Q ss_pred hHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEe
Q 007300 382 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 382 ~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
+....+.++|+|+|++..... +..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ------------~~~~~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ------------MFPAGLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ------------CCCCEEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ------------ccccCCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001124479999999985322 2222 368999999999843 244 799999
Q ss_pred ecChHHHHHHHHhCcEEEecCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCC
Q 007300 462 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 534 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~ 534 (609)
..+.++++.+++.+|+.++.... ..+|.+++|||++|+|||+++.+++.+++.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999998886211 25699999999999999999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhCCchHHHHHH
Q 007300 535 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 577 (609)
Q Consensus 535 ~d~~~la~~I~~ll~~~~~~~~~~~~~~~~--~~~fs~~~~a~~~ 577 (609)
.+.++++++|..+. .+.+.+|++++. .+.+++...+++.
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 46889998888764 346777777763 3456666555543
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.80 E-value=9.5e-18 Score=179.05 Aligned_cols=221 Identities=13% Similarity=0.080 Sum_probs=159.4
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..+|.+++.|+..++.+.+ .|++++ ++.++.|. +|...+.+.... +...+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------chHHHHh
Confidence 4589999999999999987 677766 89999884 554333222100 1122333
Q ss_pred hCCCCCCCCcEEEEEecccc-ccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHH
Q 007300 392 VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 468 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~~-~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 468 (609)
+ + ++..++++.||.+. .|+++.+++|+..+.+ +++++++.+...+...+.++++.... .++.+.......++
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCCCCHHHH
Confidence 3 2 12345667777654 3778999999999865 68999987433234556666543222 35777666666678
Q ss_pred HHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHH
Q 007300 469 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 469 ~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
..+|+.||+++.+| |...+|||++|+|+|++ +.++..|.++.| +|+++ .+ |+++++++|.++
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~~ai~~l 358 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLIKEALDL 358 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHHHHHHHH
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHHHHHHHH
Confidence 88999999999887 55569999999999999 678888888766 78864 44 999999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHH
Q 007300 548 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 548 l~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~ 586 (609)
+++ ++.+.+|+++ ...|.....+++..+.+.+.+.
T Consensus 359 l~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 359 LDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 987 7777777654 3557777788888888887774
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.80 E-value=3.1e-18 Score=182.46 Aligned_cols=229 Identities=14% Similarity=0.068 Sum_probs=159.0
Q ss_pred HHHH-hhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCC-CCCCcCCCCccccccccCcchhcccchHHH
Q 007300 308 MKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLK 385 (609)
Q Consensus 308 ~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 385 (609)
.+.. -..+|.++++|+..++.+.+ .|++++ ++.++.|.+ |...+.+... ......+
T Consensus 159 ~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~~ 216 (396)
T 3dzc_A 159 NRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDLQ 216 (396)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHHH
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhhH
Confidence 3444 45789999999999999986 677766 889998853 4221111000 0001113
Q ss_pred HHHHHHhC-CCCCCCCcEEEEEecccc-ccCHHHHHHHHhhccc--CCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEE
Q 007300 386 EALQAEVG-LPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGV 460 (609)
Q Consensus 386 ~~~~~~~g-l~~~~~~~~i~~iGrl~~-~Kg~~~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~ 460 (609)
+++++++| ++.+. ..++++.+|.+. .|+++.+++|+..+.+ ++++|++. |.+ +...+.++++... ..++.+.
T Consensus 217 ~~~r~~lg~l~~~~-~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~~ 293 (396)
T 3dzc_A 217 ATLESQFPMLDASK-KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVLI 293 (396)
T ss_dssp HHHHHTCTTCCTTS-EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEEE
T ss_pred HHHHHHhCccCCCC-CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEEe
Confidence 67788888 44322 234455556543 4789999999999865 68999886 544 3355666654322 2357766
Q ss_pred eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEc-CCCCcccccccCcceeEecccccccccCCCCCHHH
Q 007300 461 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 461 ~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
......+...+|+.||++|.+| + | +++|||++|+|+|++ +.++..|++++| +++++ . .|+++
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S---G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~~ 356 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS---G-G-IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQQ 356 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC---S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHHH
T ss_pred CCCCHHHHHHHHHhcCEEEECC---c-c-HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHHH
Confidence 5555556678999999999998 3 4 449999999999999 788888988877 56653 3 48999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHH
Q 007300 540 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 540 la~~I~~ll~~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~ 582 (609)
++++|.+++++ ++.+.+|++++ ..|.....+++..+++.
T Consensus 357 l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 357 ICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 99999999997 77777777643 55777777777777654
No 35
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.79 E-value=1.8e-18 Score=184.66 Aligned_cols=159 Identities=15% Similarity=0.057 Sum_probs=118.3
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
..++++.|++. .++.+.+.++++.+.+.++++++++++.. ..+.++ ..+.++.+.+..+ ...+|+.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEEE
Confidence 35678888886 77888888888887666788887766542 111111 2345677655442 557999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCC----CcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHhhCH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 553 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~~ 553 (609)
.++ .+.+++|||++|+|+|+...+ +..+.+.+..+|+++ ++. |+++++++|.+++++ +
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~--~ 377 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE--E 377 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--H
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--H
Confidence 765 347999999999999996654 477888888899976 666 899999999999998 5
Q ss_pred HHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 554 QALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 554 ~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
+.+.+|++.+ +.+.++++.+++.+++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 5556665544 46778999999999988753
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.68 E-value=1.3e-14 Score=152.62 Aligned_cols=161 Identities=13% Similarity=0.082 Sum_probs=106.1
Q ss_pred EEEEEeccccccCHHHHHHHHhhccc-CCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
++++.|++...+..+.+.+++..+.. .++++++ +|.+. .+ .+.+.....+.++... .|. +++..+|+.||++|
T Consensus 183 ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~-~f~-~dm~~~l~~aDlvI 257 (365)
T 3s2u_A 183 LLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVA-PFI-SDMAAAYAWADLVI 257 (365)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEE-SCC-SCHHHHHHHCSEEE
T ss_pred EEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceecccccccccc-cch-hhhhhhhccceEEE
Confidence 45566788888888999999998865 4566554 34433 33 3333334455445543 343 34567999999999
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
.-+ -++++.|+|++|+|+|....... .+.+.+...|+++ +.. ++++|+++|.++++
T Consensus 258 ~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll~ 323 (365)
T 3s2u_A 258 CRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVLM 323 (365)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred ecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHHC
Confidence 543 36889999999999998765432 2345555677765 433 58999999999999
Q ss_pred hhCHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
| ++.+.+|++++. .+....-+++..+.++++.
T Consensus 324 d--~~~~~~m~~~a~--~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 324 H--PETLRSMADQAR--SLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp C--THHHHHHHHHHH--HTCCTTHHHHHHHHHHHHC
T ss_pred C--HHHHHHHHHHHH--hcCCccHHHHHHHHHHHHH
Confidence 8 778888888763 2333344555555555554
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.68 E-value=2.5e-15 Score=161.34 Aligned_cols=161 Identities=12% Similarity=0.059 Sum_probs=109.6
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhccc-CCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~-~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
+..++++.|++. .++.+.+.++++.+.+ ++++++ ++|++.. .+.++ ..+.++.+....+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~--~~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVT--PAELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---C--GGGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC--hHHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788999998 5665665555555554 478884 6787652 11121 244567765544443 5899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
++|..+- +++++|||++|+|+|+...++ ..+.+.+...|+.+ +++ |+++++++|.+++++
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 9997542 378999999999999998765 46667777889976 655 889999999999987
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 585 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~l~ 585 (609)
++.+.++++.+ +.+..+++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 54444454433 3456788888888888776543
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.65 E-value=1.3e-15 Score=162.05 Aligned_cols=152 Identities=14% Similarity=0.114 Sum_probs=98.5
Q ss_pred CcEEEEEecccccc----------CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHH
Q 007300 400 IPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 469 (609)
Q Consensus 400 ~~~i~~iGrl~~~K----------g~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 469 (609)
.+++++.|++...| .++.+++++..+ ++++++++++.. .+.+. ..+.++.+....+ ..
T Consensus 228 ~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~~ 295 (398)
T 4fzr_A 228 PRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---LS 295 (398)
T ss_dssp CEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---HH
T ss_pred CEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---HH
Confidence 36778889996544 466667766665 789999887652 22222 3456677665543 45
Q ss_pred HHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEE----cCCCCcccccccCcceeEecccccccccCCCC--CHHHHHHH
Q 007300 470 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTT 543 (609)
Q Consensus 470 ~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~ 543 (609)
.+++.||++|. ++-+.+++|||++|+|+|+ .+..+..+.+.+...|+++ ++. |+++++++
T Consensus 296 ~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~a 361 (398)
T 4fzr_A 296 AIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLAA 361 (398)
T ss_dssp HHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHHH
T ss_pred HHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHH
Confidence 68999999995 4457899999999999999 4555778888888899976 665 78999999
Q ss_pred HHHHHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHH
Q 007300 544 VRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 579 (609)
Q Consensus 544 I~~ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~ 579 (609)
|.+++++ +..++++.+.+ +....+|+.+++.+++
T Consensus 362 i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 362 CARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 9999998 44555554443 4577888888877653
No 39
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.59 E-value=1.2e-14 Score=153.96 Aligned_cols=157 Identities=14% Similarity=0.140 Sum_probs=107.4
Q ss_pred cEEEEEeccccccCH-HHHHHHHhhccc-CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~-~~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.++++.|++...|+. ..+++++.+..+ ++++++++|++.. .+.+. ..+.++.+....+.. .+++.||++
T Consensus 220 ~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~~ 290 (391)
T 3tsa_A 220 RVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCELV 290 (391)
T ss_dssp EEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSEE
T ss_pred EEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCEE
Confidence 566777998765433 555555444433 5899999987652 11121 234567665544433 367999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEc----CCCCcccccccCcceeEecccccccccCCC----CCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~----~d~~~la~~I~~ll~~ 550 (609)
|.. +-+.+++|||++|+|+|+. +..+..+.+.+...|+++ ++ .|+++++++|.+++++
T Consensus 291 v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~~ 356 (391)
T 3tsa_A 291 ICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLGD 356 (391)
T ss_dssp EEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHTC
T ss_pred EeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHcC
Confidence 953 4457899999999999995 445567778888899976 66 6899999999999987
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 582 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~ 582 (609)
+..+.++.+.+ +....+++.+++.+++++.
T Consensus 357 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 357 --TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp --THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred --HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 44444444433 4677888888887776543
No 40
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.58 E-value=1.4e-13 Score=145.84 Aligned_cols=156 Identities=15% Similarity=0.065 Sum_probs=105.2
Q ss_pred CcEEEEEecccccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~~K--g~~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
..++++.|+....+ .+..+++++..+ ++++++ +|++.. .+.++ +.+.++......+.. .+++.||
T Consensus 232 ~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~ad 299 (402)
T 3ia7_A 232 PVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHAR 299 (402)
T ss_dssp CEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTEE
T ss_pred CEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhCC
Confidence 35678889887554 344445554443 577666 565531 11111 245567765544443 6899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcC-----CCCcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVAS-----TGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~-----~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
++|..+- ..+++|||++|+|+|+.. ..+..+.+.+...|..+ .++ ++++++++|.++++
T Consensus 300 ~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll~ 365 (402)
T 3ia7_A 300 ACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLAA 365 (402)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHHH
T ss_pred EEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHHc
Confidence 9997642 378899999999999554 44677778888889875 555 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 550 ~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
+ ++.+.++.+.+ +....+++..++.+++++.+
T Consensus 366 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 366 D--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp C--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 8 54444444332 45667888888888887754
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.55 E-value=1.5e-13 Score=145.94 Aligned_cols=153 Identities=13% Similarity=0.082 Sum_probs=107.5
Q ss_pred CcEEEEEeccccc-cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~~~-Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
..++++.|++... ++.+.+.++++.+.+.++++++++++.. .+.++ ..+.++.+....+ ...+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCEE
Confidence 3577888999654 4655565555555555889999987752 11111 3455677665443 34589999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+...|+.+ ++. ++++++ +++++
T Consensus 304 v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 953 455799999999999999 6678888 999988899976 554 566666 77777
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
+..++++.+.+ +....+++.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55455554433 567789999998887765
No 42
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.48 E-value=4.7e-12 Score=133.61 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=104.2
Q ss_pred CcEEEEEeccccc-------cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH
Q 007300 400 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 472 (609)
Q Consensus 400 ~~~i~~iGrl~~~-------Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l 472 (609)
..++++.|++... +.++.+++++..+ ++++++++.+. ..+.++. .++++.. ...+. ..+|
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3578899998865 6677888888765 78888876542 2223322 3455766 44432 3589
Q ss_pred HhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHH
Q 007300 473 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 546 (609)
Q Consensus 473 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ 546 (609)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+...|+.+ ++. ++++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999863 3468999999999999998754 66667777788875 544 78999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 547 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 547 ll~~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
++++ ++.++++.+.+ +...-..+..++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9987 44444444433 333345555555444443
No 43
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.47 E-value=3.2e-12 Score=136.28 Aligned_cols=156 Identities=14% Similarity=0.041 Sum_probs=103.2
Q ss_pred CcEEEEEecccccc--CHHHHHHHHhhcccCCeEEEE-EeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCc
Q 007300 400 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iGrl~~~K--g~~~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aD 476 (609)
..++++.|+..... .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.||
T Consensus 248 ~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad 315 (415)
T 3rsc_A 248 PVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQAT 315 (415)
T ss_dssp CEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhCC
Confidence 35677888875432 244445554443 588877 565531 11111 245567765444433 5899999
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEc----CCCCcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~ 550 (609)
++|..+- ..+++|||++|+|+|+. +.....+.+.+...|..+ ... ++++++++|.+++++
T Consensus 316 ~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 381 (415)
T 3rsc_A 316 VCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAAD 381 (415)
T ss_dssp EEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHTC
T ss_pred EEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHcC
Confidence 9997642 36889999999999995 444566777777788865 554 899999999999997
Q ss_pred hCHHHHHHHHHHH--HHhhCCchHHHHHHHHHHHH
Q 007300 551 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 583 (609)
Q Consensus 551 ~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~~~ 583 (609)
++.+.++.+.+ +....+++..++.+++++.+
T Consensus 382 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 382 --PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp --HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 44444444332 45667888888877777653
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.47 E-value=3.1e-13 Score=142.97 Aligned_cols=190 Identities=19% Similarity=0.136 Sum_probs=133.1
Q ss_pred hcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCC-CCCCCcCCCCccccccccCcchhcccchHHHHHHHHH
Q 007300 313 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 391 (609)
Q Consensus 313 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nG-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (609)
..+|.+++.++..++.+.+ .|++++ ++.++.|. +|...+. .....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchhHHHHH
Confidence 4689999999999999987 677766 78888874 3321110 011234567888
Q ss_pred hCCCCCCCCcEEEEEeccc---cccCHHHHHHHHhhcccC-CeEEEEEeCCChhhHHHHHHH-H-HhCCCceEEEeecCh
Q 007300 392 VGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGVAKFNI 465 (609)
Q Consensus 392 ~gl~~~~~~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~v~~~~~~~~ 465 (609)
+|++. +..++++.+|.+ ..|+++.+++|+..+.+. ++++++... +...+.++++ . .....++.....+..
T Consensus 198 lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 99864 235666677754 347899999999998643 677777543 3355555554 2 111235766555666
Q ss_pred HHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC-cccccccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
.+...+++.||+++.+| |.++.||+++|+|+|+..... .+|.++.| +++++ +.|.+++++++
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv-----------~~d~~~i~~ai 336 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS-----------GFKAERVLQAV 336 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC-----------CSSHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc-----------CCCHHHHHHHH
Confidence 66778999999999776 567899999999999986543 57777665 56653 34899999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
.+++++
T Consensus 337 ~~ll~d 342 (385)
T 4hwg_A 337 KTITEE 342 (385)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 999987
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.27 E-value=1.3e-10 Score=125.05 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=104.7
Q ss_pred cEEEEEecccc-----ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 401 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 401 ~~i~~iGrl~~-----~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
.++++.|++.. .|.++.+++++..+ ++++++++.+.. . +.++ ..+.++......+. ..+|..|
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~-~~l~----~~~~~v~~~~~~~~---~~ll~~a 336 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-L-EGVA----NIPDNVRTVGFVPM---HALLPTC 336 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-T-SSCS----SCCSSEEECCSCCH---HHHGGGC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-h-hhhc----cCCCCEEEecCCCH---HHHHhhC
Confidence 47788999875 48889999999876 688888766542 1 1111 23456765544443 3478999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 549 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~ 549 (609)
|++|.. +-+.+++|||++|+|+|+....+ ..+.+.+...|+.+ ++. ++++++++|.++++
T Consensus 337 d~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 337 AATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHhc
Confidence 999973 34579999999999999998743 56667777788875 544 88999999999998
Q ss_pred hhCHHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 550 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 550 ~~~~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
+ +..+.++.+.+ +....+.+.+++.+++++
T Consensus 403 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 403 D--PAHRAGAARMRDDMLAEPSPAEVVGICEELA 434 (441)
T ss_dssp C--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 54444554433 456677777777766654
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.19 E-value=3.4e-09 Score=113.25 Aligned_cols=156 Identities=10% Similarity=0.004 Sum_probs=97.3
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEE-EEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
..++++.|++. .+..+.+.++++.+.+.+++++ ++|.+... +.+ ...+.++......+.. .+|+.||++
T Consensus 256 ~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~~ 325 (424)
T 2iya_A 256 PVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASAF 325 (424)
T ss_dssp CEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSEE
T ss_pred CEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCEE
Confidence 35777889887 4444444444444544577875 46765421 111 1245567655443433 589999998
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHHHhhC
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYG 552 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll~~~~ 552 (609)
|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+ +.. ++++++++|++++++
T Consensus 326 v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~-- 389 (424)
T 2iya_A 326 ITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD-- 389 (424)
T ss_dssp EECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC--
T ss_pred EECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC--
Confidence 8632 2378999999999999998643 44556666788865 444 889999999999987
Q ss_pred HHHHHHHHHHH--HHhhCCchHHHHHHHHHH
Q 007300 553 TQALAEMMKNG--MAQDLSWKGPAKKWEETL 581 (609)
Q Consensus 553 ~~~~~~~~~~~--~~~~fs~~~~a~~~~~~~ 581 (609)
++.+.++.+.+ +...-..+..++.+++++
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 390 PGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 44334443322 233444555555555544
No 47
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=99.12 E-value=5.9e-09 Score=116.14 Aligned_cols=220 Identities=19% Similarity=0.185 Sum_probs=157.2
Q ss_pred hhHHHHHHhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccc--------cc------
Q 007300 304 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKY--------IG------ 369 (609)
Q Consensus 304 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~--------~~------ 369 (609)
.+++-..++..|..|-.||.-..+.+++..... ...+.+..++.-+.|||.+..|--...+. |.
T Consensus 467 ~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~d--f~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W 544 (879)
T 1ygp_A 467 QIRMAFLAIVGSHKVNGVVELHSELIKTTIFKD--FIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEY 544 (879)
T ss_dssp EEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHH--HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGG
T ss_pred eeehHHHHHHhcCceeEehHHHHHHHHHHHhHH--HHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhh
Confidence 567777789999999999998888875421111 11222222888999999887774211111 11
Q ss_pred -c---------cc-Cc----chhcccchHHHHH----HHHHh-CCCCC-----CCCcEEEEEeccccccCHHH-HHHHHh
Q 007300 370 -V---------KY-DA----STVMDAKPLLKEA----LQAEV-GLPVD-----RNIPVIGFIGRLEEQKGSDI-LAAAIP 423 (609)
Q Consensus 370 -~---------~~-~~----~~~~~~~~~~~~~----~~~~~-gl~~~-----~~~~~i~~iGrl~~~Kg~~~-ll~a~~ 423 (609)
. +| +. ..+...|..+|.. +++.. |...+ ++...++++-|+.++|...+ ++..+.
T Consensus 545 ~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ 624 (879)
T 1ygp_A 545 LLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIY 624 (879)
T ss_dssp GTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred hhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHH
Confidence 0 01 11 1123344444443 45667 88888 78899999999999999998 677655
Q ss_pred hccc------------------CCeEEEEEeCCC------hhhHHHHHHHHH------hCCC--ceEEEeecChHHHHHH
Q 007300 424 HFIK------------------ENVQIIVLGTGK------KPMEKQLEQLEI------LYPE--KARGVAKFNIPLAHMI 471 (609)
Q Consensus 424 ~l~~------------------~~~~lvivG~g~------~~~~~~l~~l~~------~~~~--~v~~~~~~~~~~~~~~ 471 (609)
++.+ .+.++++.|.-. +.+.+.+..++. ...+ +|+|...|+...+..+
T Consensus 625 ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~i 704 (879)
T 1ygp_A 625 RYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEII 704 (879)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHH
T ss_pred HHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHh
Confidence 4421 368899999854 234455555554 2334 7899999999999999
Q ss_pred HHhCcEEEecCCC--CCCcHHHHHHHHcCCceEEcCCCCccccccc--CcceeEeccc
Q 007300 472 IAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSF 525 (609)
Q Consensus 472 l~~aDv~v~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~--~~~G~l~~~~ 525 (609)
+.+||+-...|+. |++|.+-+-+|..|.+.|+|--|...|+.++ ..|+|+||..
T Consensus 705 ipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~ 762 (879)
T 1ygp_A 705 IPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNL 762 (879)
T ss_dssp GGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCC
T ss_pred hhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCC
Confidence 9999999998875 9999999999999999999999999999876 5699999953
No 48
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.03 E-value=2.3e-09 Score=113.25 Aligned_cols=153 Identities=17% Similarity=0.140 Sum_probs=90.0
Q ss_pred cEEEEEecccccc-CHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEE
Q 007300 401 PVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 479 (609)
Q Consensus 401 ~~i~~iGrl~~~K-g~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v 479 (609)
.+++..|++...+ +.+.+.+++..+.+.+.++++.+.+...- .....+.++......+.. .+|..+|++|
T Consensus 239 ~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~~~~~~v~~~~~~p~~---~lL~~~~~~v 309 (400)
T 4amg_A 239 RIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA------LLGELPANVRVVEWIPLG---ALLETCDAII 309 (400)
T ss_dssp EEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC------CCCCCCTTEEEECCCCHH---HHHTTCSEEE
T ss_pred EEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc------ccccCCCCEEEEeecCHH---HHhhhhhhee
Confidence 4666778876544 44556666666666678888776543100 011245567655444433 4789999988
Q ss_pred ecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCH-H
Q 007300 480 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 554 (609)
Q Consensus 480 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~-~ 554 (609)
.- +-..+++|||++|+|+|+....+ ..+.+.+...|+.. +.. +..+++|+++++++.. +
T Consensus 310 ~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~~--~~~~~al~~lL~d~~~r~ 373 (400)
T 4amg_A 310 HH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EAG--SLGAEQCRRLLDDAGLRE 373 (400)
T ss_dssp EC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CTT--TCSHHHHHHHHHCHHHHH
T ss_pred cc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CCC--CchHHHHHHHHcCHHHHH
Confidence 42 34468999999999999965543 55566666677754 333 4467889999987321 1
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHH
Q 007300 555 ALAEMMKNGMAQDLSWKGPAKKWEE 579 (609)
Q Consensus 555 ~~~~~~~~~~~~~fs~~~~a~~~~~ 579 (609)
..+++++. +...=+....++.+++
T Consensus 374 ~a~~l~~~-~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 374 AALRVRQE-MSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHH-HHTSCCHHHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHH
Confidence 22222222 3333355555555544
No 49
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.94 E-value=2.8e-08 Score=105.65 Aligned_cols=157 Identities=13% Similarity=0.050 Sum_probs=98.8
Q ss_pred CcEEEEEeccc-cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 400 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 400 ~~~i~~iGrl~-~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+++++.|++. ..+.++.+++++..+ ++++++.+.... .. . ...+.++......+. ..++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~-~-----~~~~~~v~~~~~~~~---~~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG-R-----IDEGDDCLVVGEVNH---QVLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC-C-----SSCCTTEEEESSCCH---HHHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc-c-----ccCCCCEEEecCCCH---HHHHhhCcEE
Confidence 36778889988 667778888888776 677777654331 10 0 122456766544443 3478999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 554 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~~~~ 554 (609)
|..+ -..++.||+++|+|+|+....+- .+.+.+...|..+ .....+.++++++|.++++ ++
T Consensus 289 v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l--------~~~~~~~~~l~~ai~~ll~---~~ 353 (404)
T 3h4t_A 289 VHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH--------DGPTPTVESLSAALATALT---PG 353 (404)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC--------SSSSCCHHHHHHHHHHHTS---HH
T ss_pred EECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc--------CcCCCCHHHHHHHHHHHhC---HH
Confidence 9653 22689999999999999876542 3345555677765 0122378999999999986 23
Q ss_pred HHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 555 ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 555 ~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
..+++.+. .+.+.- .-+++..+.+++++..
T Consensus 354 ~~~~~~~~--~~~~~~-~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 354 IRARAAAV--AGTIRT-DGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHH--HTTCCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH--HHHHhh-hHHHHHHHHHHHHHhh
Confidence 33333332 233333 4455555555555543
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.89 E-value=1.2e-08 Score=111.84 Aligned_cols=177 Identities=12% Similarity=0.117 Sum_probs=120.4
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEE--EEeCCC---hhhHHHHHHHHHhCCCceEEEee
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGK---KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lv--ivG~g~---~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
..+|++.+.+.++++..+++ .|..+.+++++.++.+ ++..++ ++|.+. ....+.+.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567654445777777774 7999999999998876 665553 367432 2233334444433 46777777
Q ss_pred cChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccc------cCcceeEecccccccccCCCCC
Q 007300 463 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 536 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~------~~~~G~l~~~~~~~~~~v~~~d 536 (609)
.+.++....|+.+|+++-|+.+++ |++.+|||++|+|||+....++..-+. -|-.+++ -..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~L-----------IA~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWL-----------IANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGG-----------EESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcce-----------ecCC
Confidence 777777779999999999998755 999999999999999987665554442 1223321 1357
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh-----hCCchHHHHHHHHHHHHHHH
Q 007300 537 VAAVSTTVRRALATYGTQALAEMMKNGMAQ-----DLSWKGPAKKWEETLLNLEV 586 (609)
Q Consensus 537 ~~~la~~I~~ll~~~~~~~~~~~~~~~~~~-----~fs~~~~a~~~~~~~~~l~~ 586 (609)
.+++++...++..+ ++.+.++.++.... -|+ ...++|++.|++++.
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 89999999999998 66677766554322 233 445666666666553
No 51
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.77 E-value=4.5e-08 Score=90.65 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=92.3
Q ss_pred CcEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--Hh
Q 007300 400 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 474 (609)
Q Consensus 400 ~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~ 474 (609)
..++++.|++. +.|.+..+++++..+ +.++++++++... ...+.++.+....+.. .++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCCC
Confidence 36888999985 678888888888766 5788887765421 1234567766555543 345 89
Q ss_pred CcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC----CcccccccCcceeEecccccccccCCCC--CHHHHHHHHHHHH
Q 007300 475 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 548 (609)
Q Consensus 475 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~--d~~~la~~I~~ll 548 (609)
||++|.. +-+.+++|||++|+|+|+.... +..+.+.+...|+.+ ++. ++++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999974 3468999999999999999874 346677777889876 555 8899999999999
Q ss_pred Hh
Q 007300 549 AT 550 (609)
Q Consensus 549 ~~ 550 (609)
++
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
No 52
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.74 E-value=1.3e-06 Score=92.92 Aligned_cols=155 Identities=13% Similarity=0.055 Sum_probs=100.5
Q ss_pred CcEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 400 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 400 ~~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
..++++.|++. ..+..+.+++++..+ +++++++ |.+... . ...+.++......+. ..++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 35778889985 567778888888776 5677765 665421 1 234556765544443 3578999
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 476 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
|++|.- +-..+++||+++|+|+|+....+ ..+.+.+...|+.+ ..+..+.++++++|+++ ++
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~--------~~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH--------DGPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC--------SSSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCC--------CCCCCCHHHHHHHHHHh-hC-
Confidence 999973 23469999999999999987643 44556666788865 01235789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHH-HHHHH
Q 007300 552 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLEV 586 (609)
Q Consensus 552 ~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~-~~l~~ 586 (609)
+..++++.+. .+.+....-+ +..+.+ +++..
T Consensus 370 -~~~~~~~~~~--~~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 370 -PETRARAEAV--AGMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp -HHHHHHHHHH--TTTCCCCHHH-HHHHHHHHHHHC
T ss_pred -HHHHHHHHHH--HHHHhhcCcH-HHHHHHHHHHhc
Confidence 4444444432 2333334444 556666 66654
No 53
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.15 E-value=1.1e-05 Score=85.58 Aligned_cols=155 Identities=17% Similarity=0.095 Sum_probs=105.4
Q ss_pred CcEEEEEecc-ccccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcE
Q 007300 400 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 477 (609)
Q Consensus 400 ~~~i~~iGrl-~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv 477 (609)
..++++.|++ ...+..+.+++++..+ +.+++++ |.+... . ...+.++......+.. .++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3678889998 4888888999999877 4566665 765421 0 1233456654444432 46899999
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccCcceeEecccccccccCCC--CCHHHHHHHHHHHHHhh
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 551 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~--~d~~~la~~I~~ll~~~ 551 (609)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+...|+.+ +. .+.++++++|.++ ++
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 99742 2369999999999999997654 55666666788865 43 3789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHc
Q 007300 552 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 552 ~~~~~~~~~~~~~~~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
+..++++.+ ..+.+....-+++..+.++++...
T Consensus 369 -~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 369 -PETHARATA--VAGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHH--HHHHSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHH--HHHHHhhcChHHHHHHHHHHHHhc
Confidence 444444433 234456677777888888877654
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.58 E-value=0.0028 Score=72.03 Aligned_cols=182 Identities=13% Similarity=-0.019 Sum_probs=122.8
Q ss_pred HHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhccc--CCeEEEEEeCCChhhHHHHHHHHHhCC---CceEEEeec
Q 007300 389 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 463 (609)
Q Consensus 389 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 463 (609)
|..+|||.+. ++++...+ ..|=.+..++++.++.+ ++.+|++..... ..++.+.+...+.+ +++.+....
T Consensus 514 R~~~gLp~~~--v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPEDA--IVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTTS--EEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCCC--EEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 6678898654 55544444 47777778888777766 899998887654 34556666666554 467777666
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccC---cceeEecccccccccCCCCCHHHH
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 540 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~---~~G~l~~~~~~~~~~v~~~d~~~l 540 (609)
+.++.-..+..+|+++=|.-+ +-|.+.+||+.+|+|||+-....+..=+... ..|+- ++ -..|.+++
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~--------e~-ia~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCL--------EL-IAKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCG--------GG-BCSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCc--------cc-ccCCHHHH
Confidence 766666789999999988766 4578999999999999987643322211100 01110 01 23678899
Q ss_pred HHHHHHHHHhhCHHHHHHHHH---HHHH--hhCCchHHHHHHHHHHHHHHHc
Q 007300 541 STTVRRALATYGTQALAEMMK---NGMA--QDLSWKGPAKKWEETLLNLEVA 587 (609)
Q Consensus 541 a~~I~~ll~~~~~~~~~~~~~---~~~~--~~fs~~~~a~~~~~~~~~l~~~ 587 (609)
.+...++..+ .+.+.++.+ +.+. .-|+-+..++.+++.|++++..
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 9888888887 444433322 2222 2589999999999999999875
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.04 E-value=0.061 Score=55.31 Aligned_cols=111 Identities=13% Similarity=0.126 Sum_probs=73.1
Q ss_pred HHHHhCCCCCCCCcEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEE-EeecC
Q 007300 388 LQAEVGLPVDRNIPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFN 464 (609)
Q Consensus 388 ~~~~~gl~~~~~~~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~ 464 (609)
+.++.|++.+. ..+++..|.-.+.|. .+.+.+.++.|.+.+.+++++|... ..+..+++....+.++.. .+..+
T Consensus 175 ~l~~~g~~~~~-~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~s 251 (349)
T 3tov_A 175 FYSSHGLTDTD-ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKFQ 251 (349)
T ss_dssp HHHHTTCCTTC-CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCCC
T ss_pred HHHHcCCCCCC-CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCCC
Confidence 44556765332 234455665445665 4678888888876688999888654 345556666555433333 23456
Q ss_pred hHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 465 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 465 ~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
-.++..+++.||++|..- .|..-+ |.+.|+|+|+--.
T Consensus 252 l~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg 288 (349)
T 3tov_A 252 LGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYG 288 (349)
T ss_dssp HHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECS
T ss_pred HHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEEC
Confidence 667778999999999762 466666 8999999998643
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.27 E-value=0.032 Score=56.98 Aligned_cols=113 Identities=16% Similarity=0.161 Sum_probs=74.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEec-cccccCH--HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCC----Cce
Q 007300 385 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 457 (609)
Q Consensus 385 ~~~~~~~~gl~~~~~~~~i~~iGr-l~~~Kg~--~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v 457 (609)
.+.+++.+|++.+ ...+++..|. ..+.|.. +.+.++++.|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4566777787532 2245666676 5566654 488888888876689999988654 2344455544332 124
Q ss_pred EEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 458 RGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 458 ~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
... +..+-.++..+++.||++|... .|..-+ |.++|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 332 3345567778999999999875 455544 899999999864
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=95.66 E-value=0.092 Score=56.00 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=80.6
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.+.+..|.+... ..+.+.+.+..|.+.+.+|+++-.+.. ....-+.+..+.++++... .|-.+. .+++.+++.++
T Consensus 275 vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv-~w~Pq~--~vL~h~~v~~f 349 (454)
T 3hbf_A 275 VVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIV-AWAPQV--EILKHSSVGVF 349 (454)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEE-SSCCHH--HHHHSTTEEEE
T ss_pred eEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEE-eeCCHH--HHHhhcCcCeE
Confidence 455667776532 234444444444444677776543331 1111112223344556555 443332 58999997777
Q ss_pred cCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 481 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 481 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-++ +| .+++||+++|+|.|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 350 vtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 350 LTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred Eec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 666 66 48999999999999987543 33445553 6777541 0124689999999999976
No 58
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.46 E-value=0.062 Score=53.47 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=61.3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.++++.|..+...-.+.+++++... .. -.+|+|.+.+ ..+.+++...+.+ ++..+ .|. +.+..+|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~-~~~~l~~~~~~~~-~v~v~-~~~-~~m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNP-NLKKLQKFAKLHN-NIRLF-IDH-ENIAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCT-THHHHHHHHHTCS-SEEEE-ESC-SCHHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCch-HHHHHHHHHhhCC-CEEEE-eCH-HHHHHHHHHCCEEEE
Confidence 4566788766554344555555433 23 3466788765 3455555555444 45544 343 446679999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCC
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVAST 506 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~~ 506 (609)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 3 46899999999999988653
No 59
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.14 E-value=0.22 Score=56.55 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=121.5
Q ss_pred HhhcCCEEEeeCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHH
Q 007300 311 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 390 (609)
Q Consensus 311 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (609)
.....|.+++.|+...+.+.+. ++++.+ .++..|. |..|... + .......++.+++
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~------PR~D~l~----~----~~~~~~~~~~~~~ 530 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRSA--FWMDEE--------RILEIGY------PRNDVLV----N----RANDQEYLDEIRT 530 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHHH--TCCCGG--------GEEESCC------GGGHHHH----H----STTCHHHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHHH--hCCCcc--------eEEEcCC------CchHHHh----c----ccchHHHHHHHHH
Confidence 3456899999999999988753 555433 3455554 2211100 0 0112234677889
Q ss_pred HhCCCCCCCCcEEEEEecccccc----C-----HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEe
Q 007300 391 EVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 391 ~~gl~~~~~~~~i~~iGrl~~~K----g-----~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
.++++. ++++|+|.-.+.... | ...-++.+.+....++.|++-.- +...+.+. + ..+.+.+....
T Consensus 531 ~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~H--p~~~~~~~-~-~~~~~~~~~~~ 604 (729)
T 3l7i_A 531 HLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRMH--YLISNALD-L-SGYENFAIDVS 604 (729)
T ss_dssp HTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECCC--HHHHTTCC-C-TTCTTTEEECT
T ss_pred HhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEecC--cchhcccc-c-cccCCcEEeCC
Confidence 999874 558999998766531 1 11122333333234666665432 21111110 0 11222233222
Q ss_pred ecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHH
Q 007300 462 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 541 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la 541 (609)
. .+.+.+++..||++|-= ++-+++|++..++|||--... ..+.. +...|+.+. +..+.--.-..+.++|.
T Consensus 605 ~--~~di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~~~D-~~~Y~-~~~rg~y~d-~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 N--YNDVSELFLISDCLITD-----YSSVMFDYGILKRPQFFFAYD-IDKYD-KGLRGFYMN-YMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp T--CSCHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEECTT-TTTTT-SSCCSBSSC-TTSSSSSCEESSHHHHH
T ss_pred C--CcCHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEecCC-HHHHh-hccCCcccC-hhHhCCCCeECCHHHHH
Confidence 2 23456789999999943 677899999999999977321 11111 111333221 00000000136789999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhhCCc--hHHHHHHHHHHHHHHH
Q 007300 542 TTVRRALATYGTQALAEMMKNGMAQDLSW--KGPAKKWEETLLNLEV 586 (609)
Q Consensus 542 ~~I~~ll~~~~~~~~~~~~~~~~~~~fs~--~~~a~~~~~~~~~l~~ 586 (609)
++|...... ...+.+..++...+-+.+ ...+++..+.+.+...
T Consensus 675 ~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 999887764 333333333333333333 3466666665554443
No 60
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=94.91 E-value=0.19 Score=54.04 Aligned_cols=131 Identities=8% Similarity=-0.011 Sum_probs=77.4
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-----h-hhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 474 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~ 474 (609)
.+++..|.+.. ...+.+.+.+..|.+.+.+++++-... . .+.+.+ ..+.++++.... |-... .+|+.
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~---~~~~~~~~~v~~-~~pq~--~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEF---TNEIADRGLIAS-WCPQD--KVLNH 369 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHH---HHHHTTTEEEES-CCCHH--HHHTS
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhH---HHhcCCCEEEEe-ecCHH--HHhcC
Confidence 45666777542 233444444444444577887653221 0 011122 122344565544 43333 38988
Q ss_pred CcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccccc-cCcceeEecccccccccCCCCCHHHHHHHHHHHH
Q 007300 475 ADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548 (609)
Q Consensus 475 aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i~-~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll 548 (609)
+++-++-++ +| .+++||+++|+|+|+-...+ ....+. +.+.|+.+. ..-+.+++.++|++++
T Consensus 370 ~~~~~~vth---~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 370 PSIGGFLTH---CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVI 437 (482)
T ss_dssp TTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHH
T ss_pred CCCCEEEec---CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHH
Confidence 887555554 44 58999999999999987643 233343 456777540 1247899999999999
Q ss_pred Hh
Q 007300 549 AT 550 (609)
Q Consensus 549 ~~ 550 (609)
++
T Consensus 438 ~~ 439 (482)
T 2pq6_A 438 AG 439 (482)
T ss_dssp TS
T ss_pred cC
Confidence 86
No 61
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=94.65 E-value=0.43 Score=51.14 Aligned_cols=138 Identities=10% Similarity=-0.003 Sum_probs=77.9
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCC-------------hhhHHHH-HHHHHhCCCceEEEeecCh
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-------------KPMEKQL-EQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~-------------~~~~~~l-~~l~~~~~~~v~~~~~~~~ 465 (609)
.+.+..|.+.. ...+.+.+.+..|.+.+.+++++ |.+. ..+...+ +....+..++-.....|-.
T Consensus 270 vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~P 348 (480)
T 2vch_A 270 VLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAP 348 (480)
T ss_dssp EEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCC
T ss_pred eEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccC
Confidence 56677788753 34455555555555557777765 4321 0010000 0111111111122232433
Q ss_pred HHHHHHHHhCcEEEecCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccc-ccCcceeEecccccccccCCCCCHHH
Q 007300 466 PLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAA 539 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~i-~~~~~G~l~~~~~~~~~~v~~~d~~~ 539 (609)
.. .+|+.+++.++-++ +| .+++||+++|+|+|+-...+ ....+ ++-+.|..+.. ..+ ..-+.++
T Consensus 349 q~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~-~~~----~~~~~~~ 418 (480)
T 2vch_A 349 QA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA-GDD----GLVRREE 418 (480)
T ss_dssp HH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCC-CTT----SCCCHHH
T ss_pred HH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeec-ccC----CccCHHH
Confidence 32 58999998666665 55 48999999999999987643 33343 45567774400 000 0247899
Q ss_pred HHHHHHHHHH
Q 007300 540 VSTTVRRALA 549 (609)
Q Consensus 540 la~~I~~ll~ 549 (609)
++++|++++.
T Consensus 419 l~~av~~vl~ 428 (480)
T 2vch_A 419 VARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999997
No 62
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=94.50 E-value=0.4 Score=51.03 Aligned_cols=131 Identities=11% Similarity=-0.015 Sum_probs=74.1
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCCh-hhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCc
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GAD 476 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aD 476 (609)
.+++..|.+... ..+.+.+++..|.+.+++++++ |.... .+.+.+ ..+.+.++... .|-... .+|+ .+|
T Consensus 273 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~-~w~pq~--~vL~h~~~~ 345 (456)
T 2c1x_A 273 VVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVV-PWAPQA--EVLAHEAVG 345 (456)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEE-SCCCHH--HHHTSTTEE
T ss_pred eEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEe-cCCCHH--HHhcCCcCC
Confidence 456667776533 3344444444444345666654 43321 111111 11123345544 443332 4788 455
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
++| ++ +=..+++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 346 ~fv--th--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 346 AFV--TH--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEE--EC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred EEE--ec--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 665 33 23458999999999999987543 33455555 6777540 0123689999999999987
No 63
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=91.98 E-value=3 Score=44.23 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=73.8
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEE-eCCChhhHHHH-HHHHHhCCCceEEEeecChHHHHHHHH--hCc
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQL-EQLEILYPEKARGVAKFNIPLAHMIIA--GAD 476 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aD 476 (609)
.+++..|.+...-+.+.+.+++..|.+.+.+++++ |.+.+.+.+.+ ++... ++++.... |-... .+|+ .+|
T Consensus 278 vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~v~~-w~pq~--~vL~h~~~~ 352 (463)
T 2acv_A 278 VVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMICG-WAPQV--EVLAHKAIG 352 (463)
T ss_dssp EEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEES-SCCHH--HHHHSTTEE
T ss_pred eEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEEEEc-cCCHH--HHhCCCccC
Confidence 46667777662234344444444444446777765 43311111111 11110 22354433 43332 3676 456
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-cccCcceeEec-ccccccccCC--CCCHHHHHHHHHHHH
Q 007300 477 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRAL 548 (609)
Q Consensus 477 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-i~~~~~G~l~~-~~~~~~~~v~--~~d~~~la~~I~~ll 548 (609)
++|. + +=..+++||+++|+|+|+-...+ .... +++.+.|+.++ ... -. .-+.+++.++|++++
T Consensus 353 ~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 353 GFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp EEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHHT
T ss_pred eEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHHH
Confidence 6653 3 23458999999999999987643 3334 45666777531 000 01 247899999999999
Q ss_pred H
Q 007300 549 A 549 (609)
Q Consensus 549 ~ 549 (609)
+
T Consensus 424 ~ 424 (463)
T 2acv_A 424 D 424 (463)
T ss_dssp C
T ss_pred h
Confidence 6
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=87.90 E-value=2.5 Score=42.22 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=82.1
Q ss_pred cEEEEEeccccccC--HHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEE
Q 007300 401 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg--~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~ 478 (609)
.+++..|.-.+.|. .+.+.+.++.|.+.++++++.+.++ ...+..+++....+. +...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 45566666555565 4588888888877788988874333 233444555544443 4444455667777899999999
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcCCCCccccccc-CcceeEe-cccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~i~~-~~~G~l~-~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|-.- .|..=+ |.+.|+|+|+--....+..... +.....+ +. .+ .+..=+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~--cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GN--ELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GG--CGGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--cc--cccCCCHHHHHHHHHHHHHH
Confidence 9763 455556 7779999988632221221111 1111111 10 01 12444678888888877753
No 65
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=85.58 E-value=0.92 Score=43.24 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=29.7
Q ss_pred HHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007300 466 PLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 507 (609)
Q Consensus 466 ~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 507 (609)
+.+..+|+ .||++|.= +=..+++|++++|+|.|.-...
T Consensus 123 ~~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 123 TKMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SSHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred chHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 44556899 99999953 3456899999999999887653
No 66
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.52 E-value=7.8 Score=41.04 Aligned_cols=111 Identities=16% Similarity=0.164 Sum_probs=70.1
Q ss_pred EEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCCh------------------hhHHHHHHHHHhCCCceEEEeec
Q 007300 402 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------------------PMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 402 ~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~------------------~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
.+.++|. .+.++.+.+.+....++--+++|+|.|.- .-.+..++++.++++-+...+.-
T Consensus 211 ~v~~i~~---~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~ 287 (461)
T 4g65_A 211 EVFFVAA---SNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDA 287 (461)
T ss_dssp EEEEEEE---TTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCT
T ss_pred EEEEEec---cchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccc
Confidence 3455554 46677777777665444457888898751 23566777777777655555554
Q ss_pred -ChHHHH-HHHHhCcEEEecCCC-CCCcHHHHHHHHcCCceEEcCC--CCccccccc
Q 007300 464 -NIPLAH-MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST--GGLVDTVEE 515 (609)
Q Consensus 464 -~~~~~~-~~l~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~--gg~~e~i~~ 515 (609)
+.+.+. .=+..+|+++..... |.-=++.+-|-.+|++-+.+.. ....++++.
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~ 344 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQG 344 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCS
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhc
Confidence 333332 236889999987766 4444456678889998877754 344555544
No 67
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=76.59 E-value=2.4 Score=41.74 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=29.3
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
..|+.||||+|... |. ..+=...+.....++|.+.||+|+++-..
T Consensus 18 ~~m~~MKiLII~aH--P~-~~S~n~aL~~~~~~~l~~~G~eV~v~DLy 62 (280)
T 4gi5_A 18 LYFQSMKVLLIYAH--PE-PRSLNGALKNFAIRHLQQAGHEVQVSDLY 62 (280)
T ss_dssp ----CCEEEEEECC--SC-TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred chhhCCeEEEEEeC--CC-CccHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 44788999999874 64 22223445556778889999999998643
No 68
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=75.55 E-value=3.3 Score=36.25 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=32.7
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeE-EEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V-~vit~~ 127 (609)
.|||+|+... +|+ ..-.+.....++.++.+.||+| .|+-..
T Consensus 12 ~~~~~ivv~~-~Py--g~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 5999999887 676 3445666788999999999999 777754
No 69
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=74.57 E-value=3.5 Score=35.34 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=31.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeE-EEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V-~vit~~ 127 (609)
||++|+... +|+ ..-.......++.++.+.||+| .|+-..
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 799999876 665 3345566788999999999999 887755
No 70
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=73.66 E-value=2.3 Score=44.08 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=30.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||++++. | ++|=-.-...|+++|+++||+|+++++..
T Consensus 1 M~Il~~~~---~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~~ 38 (415)
T 1iir_A 1 MRVLLATC---G---SRGDTEPLVALAVRVRDLGADVRMCAPPD 38 (415)
T ss_dssp CEEEEECC---S---CHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEEcC---C---CchhHHHHHHHHHHHHHCCCeEEEEcCHH
Confidence 89999852 3 46666677789999999999999999763
No 71
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=72.91 E-value=2.2 Score=42.03 Aligned_cols=27 Identities=33% Similarity=0.516 Sum_probs=22.0
Q ss_pred chHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 101 GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||.|-.=..|++.|.++||+|++++.+
T Consensus 7 GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 7 GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 566666667999999999999998754
No 72
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=72.70 E-value=40 Score=27.92 Aligned_cols=110 Identities=13% Similarity=0.140 Sum_probs=68.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+.. .....+.++..+.+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDP-DIARLLNLMLEKGGFDSD--MVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCH-HHHHHHHHHHHHCCCeEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 45677777654 344555555555443332 2224444433433 45888886554 4567778887765 677
Q ss_pred eEEcCCCC----cc-cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 501 PIVASTGG----LV-DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 501 vI~s~~gg----~~-e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
+|.-.... .. +.+..|..+++. .|-+.+++..+|.+++...
T Consensus 83 ii~~s~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPLAVSTWLE----------KPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTTCCCEEEC----------SSCCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhcCCCEEEe----------CCCCHHHHHHHHHHHHHhc
Confidence 76655332 22 455667788876 8899999999999999863
No 73
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=71.00 E-value=43 Score=30.80 Aligned_cols=129 Identities=15% Similarity=0.151 Sum_probs=68.8
Q ss_pred cCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEee----------------cCh-HHHHHHHHhC
Q 007300 413 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK----------------FNI-PLAHMIIAGA 475 (609)
Q Consensus 413 Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~----------------~~~-~~~~~~l~~a 475 (609)
.+.+..-+..+.|.+.++.+|- | |.........+-+.+.+..+..... ..- ..-..+...|
T Consensus 42 ~~~~~A~~lg~~LA~~G~~vVs-G-g~~GiM~aa~~gAl~~GG~~iGVlP~e~~~~~~~~~~~~~~~~f~~Rk~~m~~~s 119 (195)
T 1rcu_A 42 ELRDICLELGRTLAKKGYLVFN-G-GRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRNA 119 (195)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEE-C-CSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEe-C-CHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCcceeeecCCCHHHHHHHHHHhC
Confidence 5566666666666667776554 7 4434555555544444333333321 111 1222467788
Q ss_pred cEEEecCCCCCCcH--HHHHHHHcCCceEEcCCCC-cccccccC-cce-eEecccccccccCCCCCHHHHHHHHHHH
Q 007300 476 DFILIPSRFEPCGL--IQLHAMRYGTVPIVASTGG-LVDTVEEG-FTG-FQMGSFSVDCEAVDPVDVAAVSTTVRRA 547 (609)
Q Consensus 476 Dv~v~pS~~E~~gl--~~lEAma~G~PvI~s~~gg-~~e~i~~~-~~G-~l~~~~~~~~~~v~~~d~~~la~~I~~l 547 (609)
|.+|+.. -++|. .+.||+..|+||++-+..| +.+++... ..| |+- .-+.+ .+.-.+|++++.+.|+++
T Consensus 120 da~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~-~~~~~-~i~~~~~~ee~~~~l~~~ 192 (195)
T 1rcu_A 120 DVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLD-NRRIV-EIHQAWTVEEAVQIIEQI 192 (195)
T ss_dssp SEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSS-TTCCS-CEEEESSHHHHHHHHHTC
T ss_pred CEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCC-HHHcC-eEEEeCCHHHHHHHHHHH
Confidence 8876643 23565 4889999999999997544 33333221 122 221 00000 012456788888877653
No 74
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.61 E-value=3.9 Score=38.52 Aligned_cols=39 Identities=23% Similarity=0.385 Sum_probs=26.4
Q ss_pred cccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 79 ~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
...+++|||++.+. +||+|. .+++.|.++||+|.+++..
T Consensus 16 ~~~l~~~~ilVtGa-------tG~iG~---~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 16 NLYFQGMRVLVVGA-------NGKVAR---YLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -----CCEEEEETT-------TSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred ccCcCCCeEEEECC-------CChHHH---HHHHHHHhCCCeEEEEECC
Confidence 34466889877653 466664 5788899999999998865
No 75
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=62.69 E-value=5.3 Score=38.68 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=29.2
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
+++||||+.+..- . .+.-+..|.++|.+ +|+|.|++|..++
T Consensus 9 ~~~m~ILlTNDDG-i------~apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 9 TPKLRLLLSNDDG-V------YAKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp --CCEEEEECSSC-T------TCHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCCeEEEEcCCC-C------CCHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 4469999988762 2 12236778888877 7999999998654
No 76
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=62.06 E-value=6.4 Score=35.77 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=26.0
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|+|+++.. +|++| ..+++.|.++||+|.+++..
T Consensus 1 M~~~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 34578776553 35555 45788899999999988865
No 77
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=61.62 E-value=68 Score=26.50 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=68.4
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH----hCcEEEecCCC-CCCcHHHHHHHHc---CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~----~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 501 (609)
.+++|+.+.. ...+.+..+....+..+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVL--TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEE--EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4677777654 355556665555553332 2234444444454 57888886554 4567777666543 5677
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-.... ..+.+..|..+++. .|-+.+++..+|.+++..
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLR----------KPVTAQDLSIAINNAINR 123 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHhCcceeEe----------CCCCHHHHHHHHHHHHHH
Confidence 6543322 33455678889987 899999999999999875
No 78
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=61.10 E-value=57 Score=27.18 Aligned_cols=109 Identities=15% Similarity=0.118 Sum_probs=65.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+... ....+.......+ +.....-+...+...+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 8 ~~~iLivd~~~~-~~~~l~~~L~~~g--~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 8 WWRIMLVDTQLP-ALAASISALSQEG--FDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp CEEEEEECTTGG-GGHHHHHHHHHHT--EEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred CceEEEEeCCHH-HHHHHHHHHHHcC--CeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCC
Confidence 567788877653 3333333333333 22222224444333332 47888886554 4467778888764 567
Q ss_pred eEEcCCCCc----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 501 PIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+-....- .+.+..|..+++. .|-+.+++..+|.+++..
T Consensus 85 ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDMGFIDFIA----------KPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp EEEEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 765433222 2334567889987 899999999999999875
No 79
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=60.89 E-value=6.8 Score=41.63 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|++++|+++.. | ..|=-.-+..|++.|+++||+|+++++..
T Consensus 6 ~~~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~~ 46 (482)
T 2pq6_A 6 NRKPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTEY 46 (482)
T ss_dssp --CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCCCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 34579998872 4 35556678889999999999999999763
No 80
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=60.15 E-value=65 Score=33.62 Aligned_cols=136 Identities=14% Similarity=0.066 Sum_probs=75.7
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcc----cCCeEEEEEeCCChhhHHHHHHHHHh------CCCceEEEee-c----
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFI----KENVQIIVLGTGKKPMEKQLEQLEIL------YPEKARGVAK-F---- 463 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~----~~~~~lvivG~g~~~~~~~l~~l~~~------~~~~v~~~~~-~---- 463 (609)
...+++|.|.-.. + +...++..++- +.++. ++.|.|+.-++.....-... .++.+.+... +
T Consensus 144 ~~~ivVv~GSs~~--~-~~~Ye~A~eLGr~LA~~G~~-LVtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~ 219 (460)
T 3bq9_A 144 EPNMVVCWGGHSI--N-EIEYKYTKDVGYHIGLRGLN-ICTGCGPGAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAA 219 (460)
T ss_dssp CSCEEEEECCSSC--C-HHHHHHHHHHHHHHHHTTCE-EEECCSSGGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTT
T ss_pred CCCEEEEEcCCCC--C-CHHHHHHHHHHHHHHHCCCE-EEeCCcHHHhhHHHhhHHhhcccccCCCCEEEEEeChhhhhh
Confidence 3357788887542 1 22224444442 35654 45566665564655555444 3445555532 1
Q ss_pred -------------C--hHHHHHHHHhCcEEEecCCCCCCcHH--HHHHHH---------cCCceEEcC---CCCccc-cc
Q 007300 464 -------------N--IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMR---------YGTVPIVAS---TGGLVD-TV 513 (609)
Q Consensus 464 -------------~--~~~~~~~l~~aDv~v~pS~~E~~gl~--~lEAma---------~G~PvI~s~---~gg~~e-~i 513 (609)
. ......++..||.+|.-. -++|.- ++|++. .++|||..+ +.|..+ ++
T Consensus 220 E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLP--GG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll 297 (460)
T 3bq9_A 220 EPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFP--GGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALD 297 (460)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECS--CSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHH
T ss_pred hhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcC--CCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHH
Confidence 0 111224778899877643 367775 888877 589999985 344333 21
Q ss_pred ---c----c-CcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 514 ---E----E-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 514 ---~----~-~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
. + ....+++ -.+|++++.+.|.+.+..
T Consensus 298 ~~l~~~l~~~~~~~~ii----------v~ddpeEal~~l~~~~~~ 332 (460)
T 3bq9_A 298 EFIGATIGDEARQLYKI----------IIDDPAAVAQHMHAGMAA 332 (460)
T ss_dssp HHHHHHTCTTGGGGCEE----------EESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcchhhcCcEE----------EeCCHHHHHHHHHHHHHH
Confidence 1 1 1112221 358999999999887765
No 81
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=59.90 E-value=73 Score=26.35 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=70.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+.. .....+..+....+........-+...+...+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 46777777654 355566666555554322333335555544444 35888876554 4467788888765 577
Q ss_pred eEEcCCCC----cccccccCcceeEecccccccccCCCC-CHHHHHHHHHHHHHh
Q 007300 501 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~-d~~~la~~I~~ll~~ 550 (609)
+|+-.... ..+.+..|..+++. -|. +.+++.++|.+++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVD----------KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEE----------CCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCcHHHHHHHHHHHHHH
Confidence 76654322 22345567889987 888 999999999999875
No 82
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=59.76 E-value=8.4 Score=33.37 Aligned_cols=41 Identities=12% Similarity=0.014 Sum_probs=30.7
Q ss_pred Cc-eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GL-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~M-kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.| |++|+... +|+ ..-...-...++.++++.||+|.|+-..
T Consensus 4 ~Mkk~~ivv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 4 VVKKFMYLNRK-APY--GTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp -CCEEEEEECS-CTT--TSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred chhEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 47 49999876 675 2235555788899999999999888865
No 83
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=59.65 E-value=10 Score=37.06 Aligned_cols=45 Identities=18% Similarity=0.037 Sum_probs=31.9
Q ss_pred HHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007300 467 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
.+..++..+|+++--+.-+..--.+..++..|+|+|+..+|...+
T Consensus 66 dl~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 66 DIERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp CHHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred CHHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 344578899999876654443334667899999999988775433
No 84
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=58.95 E-value=11 Score=32.34 Aligned_cols=41 Identities=15% Similarity=-0.128 Sum_probs=31.6
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+|++||... .|+ ...-......++.+.++.||+|.|+-..
T Consensus 15 ~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 4689988876 565 3445556777888899999999988866
No 85
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=58.54 E-value=76 Score=26.08 Aligned_cols=110 Identities=6% Similarity=0.026 Sum_probs=67.1
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CC
Q 007300 428 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 499 (609)
Q Consensus 428 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~ 499 (609)
...+++|+.+.. ...+.+.++....+-.+ ...-+...+...+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 6 ~~~~iLivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 82 (142)
T 3cg4_A 6 HKGDVMIVDDDA-HVRIAVKTILSDAGFHI--ISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGI 82 (142)
T ss_dssp CCCEEEEECSCH-HHHHHHHHHHHHTTCEE--EEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTE
T ss_pred CCCeEEEEcCCH-HHHHHHHHHHHHCCeEE--EEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCC
Confidence 356777777654 34455555554444223 22234444444444 35788776554 4467778887764 45
Q ss_pred ceEEcC-C---CCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 500 VPIVAS-T---GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 500 PvI~s~-~---gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|+|+-. . ....+.+..|..+++. .|-+.+++.+.|..++..
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 127 (142)
T 3cg4_A 83 AIVMLTAKNAPDAKMIGLQEYVVDYIT----------KPFDNEDLIEKTTFFMGF 127 (142)
T ss_dssp EEEEEECTTCCCCSSTTGGGGEEEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHhcCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 665543 2 2234455667788876 889999999999998864
No 86
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=57.29 E-value=85 Score=26.28 Aligned_cols=111 Identities=13% Similarity=0.118 Sum_probs=68.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH-----------hCcEEEecCCC-CCCcHHHHHHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA-----------GADFILIPSRF-EPCGLIQLHAMR 496 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~-----------~aDv~v~pS~~-E~~gl~~lEAma 496 (609)
..+++|+.+.. .....+.++....+........-+...+...+. ..|++++-... +.-|+-+++.+.
T Consensus 4 ~~~ILivddd~-~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr 82 (152)
T 3heb_A 4 SVTIVMIEDDL-GHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVK 82 (152)
T ss_dssp -CEEEEECCCH-HHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHH
T ss_pred CceEEEEeCCH-HHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 35677777654 355566666555553112222234555544552 46888876554 456777888776
Q ss_pred c-----CCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 497 Y-----GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 497 ~-----G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
. .+|+|.-.... ..+.+..|..+++. -|-+.+++.++|.++...
T Consensus 83 ~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 135 (152)
T 3heb_A 83 ENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT----------KPVNYENFANAIRQLGLF 135 (152)
T ss_dssp HSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred hcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 5 56776544332 23345567888987 899999999999988653
No 87
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=56.95 E-value=85 Score=26.58 Aligned_cols=108 Identities=18% Similarity=0.155 Sum_probs=62.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH----hCcEEEecCCC-CCCcHHHHHHHHc---CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~----~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 501 (609)
.+++|+.+.. ...+.+..+..+.+-.+.. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 37 ~~Ilivdd~~-~~~~~l~~~L~~~g~~v~~-~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~i 114 (157)
T 3hzh_A 37 FNVLIVDDSV-FTVKQLTQIFTSEGFNIID-TAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARV 114 (157)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCE
T ss_pred eEEEEEeCCH-HHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcE
Confidence 4666666543 3444555544444422321 2223444333333 45888886654 4456666666543 5777
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
|+-.... ..+.+..|..+++. -|-+.+++.++|.+++.
T Consensus 115 i~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 115 IMISALGKEQLVKDCLIKGAKTFIV----------KPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHTTC
T ss_pred EEEeccCcHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHhc
Confidence 6554322 23345567888987 89999999999988763
No 88
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.45 E-value=11 Score=31.07 Aligned_cols=40 Identities=18% Similarity=0.061 Sum_probs=29.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC-CC-eEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh-~V~vit~~ 127 (609)
||++|+... .|+ ..........++.++.+. || +|.|+-..
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 378888776 565 334455578888999998 99 99888865
No 89
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=54.65 E-value=85 Score=25.46 Aligned_cols=110 Identities=12% Similarity=0.064 Sum_probs=68.2
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH---------hCcEEEecCCC-CCCcHHHHHHHH---
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMR--- 496 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~---------~aDv~v~pS~~-E~~gl~~lEAma--- 496 (609)
.+++|+.+.. ...+.+.+.....+........-+...+...+. ..|++++-... +.-|+.+++.+.
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 3 KKIFLVEDNK-ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDP 81 (140)
T ss_dssp CEEEEECCCH-HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHST
T ss_pred CeEEEEeCCH-HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCc
Confidence 4667777654 355556665555553112222334455544554 47888886655 446777777765
Q ss_pred --cCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 497 --YGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 497 --~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
..+|+|.-.... ..+.+..|..+++. .|-+.+++.+.|.+++..
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT----------KSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCcHHHHHHHHHhchhheec----------CCCCHHHHHHHHHHHHHH
Confidence 356776543322 23344567888887 899999999999998764
No 90
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=54.08 E-value=24 Score=35.45 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=34.0
Q ss_pred HHHHHHhCcEEEe--cCCCCCC---cHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILI--PSRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~--pS~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++ |..-|+. +-..+..|--|.-+|-+.-|++.+
T Consensus 188 l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVd 236 (334)
T 3kb6_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcccccc
Confidence 4468999999877 4444554 556899999999999999998765
No 91
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=53.60 E-value=82 Score=25.77 Aligned_cols=106 Identities=12% Similarity=0.216 Sum_probs=58.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCCCCCcHHHHHHHHc---CCceEE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMRY---GTVPIV 503 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~E~~gl~~lEAma~---G~PvI~ 503 (609)
..+++|+.+.. .....+..+....+-.+. ..-+...+...+. ..|++++| +.-|+.+++.+.. .+|+|.
T Consensus 18 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ 91 (137)
T 2pln_A 18 SMRVLLIEKNS-VLGGEIEKGLNVKGFMAD--VTESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLV 91 (137)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEE
Confidence 45666666543 233444444444332222 2223333333333 35777722 3346666666543 677765
Q ss_pred cCCCC----cccccccCcceeEecccccccccCCCC-CHHHHHHHHHHHHHh
Q 007300 504 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 550 (609)
Q Consensus 504 s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~-d~~~la~~I~~ll~~ 550 (609)
-.... ..+.+..|..+++. -|- +.+++..+|.+++..
T Consensus 92 ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 92 SSDNPTSEEEVHAFEQGADDYIA----------KPYRSIKALVARIEARLRF 133 (137)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEE----------SSCSCHHHHHHHHHHHTC-
T ss_pred EeCCCCHHHHHHHHHcCCceeee----------CCCCCHHHHHHHHHHHHhh
Confidence 43322 23345567888886 888 999999999988754
No 92
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=53.15 E-value=9.7 Score=36.45 Aligned_cols=39 Identities=23% Similarity=0.363 Sum_probs=29.4
Q ss_pred CCceEEEEEeecCCccccchHH--HHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~--~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++|||+.|++. .||.| +...+|+.+|+++|++|.+|=..
T Consensus 4 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 4 AKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp -CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 35787777643 46555 67788999999999999988755
No 93
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=52.83 E-value=1e+02 Score=25.77 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=66.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
-.+++|+.+.. ...+.+.++....+........-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 20 m~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 98 (150)
T 4e7p_A 20 HMKVLVAEDQS-MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVV 98 (150)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEE
Confidence 35677776643 344555555544432222222224444444443 35788876554 4567777776654 56665
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+++. .|-+.+++.++|.+++..
T Consensus 99 ~ls~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 99 VVTTFKRAGYFERAVKAGVDAYVL----------KERSIADLMQTLHTVLEG 140 (150)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTSCHHHHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHHHHHCCCcEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 544322 33455678889987 899999999999999875
No 94
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=52.22 E-value=15 Score=30.86 Aligned_cols=39 Identities=21% Similarity=0.029 Sum_probs=29.4
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|+... +|+ ..-.+.-...++.++.+.||+|.|+-..
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 58888876 676 2234455678999999999999888765
No 95
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=52.14 E-value=9.7 Score=34.99 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=24.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++++. +|++| ..+++.|.++||+|.+++.+
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78766553 36666 45788899999999988865
No 96
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=52.12 E-value=98 Score=25.41 Aligned_cols=108 Identities=14% Similarity=0.102 Sum_probs=66.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~Pv 501 (609)
.+++|+.+.. .....+..+....+-.+. ..-+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pi 81 (136)
T 3t6k_A 5 HTLLIVDDDD-TVAEMLELVLRGAGYEVR--RAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI 81 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHHCCCEEE--EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccE
Confidence 4566676644 344555555555443332 2234444433443 35888876554 4457777777653 5677
Q ss_pred EEcCCCCc----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-...+- .+.+..|..+|+. -|-+.+++..+|.+++..
T Consensus 82 i~~t~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 82 LMLTAQGDISAKIAGFEAGANDYLA----------KPFEPQELVYRVKNILAR 124 (136)
T ss_dssp EEEECTTCHHHHHHHHHHTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEecCCCHHHHHHHHhcCcceEEe----------CCCCHHHHHHHHHHHHhc
Confidence 65443222 2345567889987 899999999999999875
No 97
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=52.09 E-value=1e+02 Score=25.71 Aligned_cols=108 Identities=15% Similarity=0.191 Sum_probs=64.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh---CcEEEecCCC-CCCcHHHHHHHH---cCCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~---aDv~v~pS~~-E~~gl~~lEAma---~G~Pv 501 (609)
..+++|+.+.. ...+.+.++... + ......-+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~~ILivdd~~-~~~~~l~~~L~~-~--~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 79 (151)
T 3kcn_A 4 NERILLVDDDY-SLLNTLKRNLSF-D--FEVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVY 79 (151)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTT-T--SEEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHhcc-C--ceEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEE
Confidence 35677777654 234444444332 3 222223344444444432 3888886554 455777766654 35666
Q ss_pred EEcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-.... ..+.+..| ..+++. -|-+.+++.++|..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 80 LMLTGNQDLTTAMEAVNEGQVFRFLN----------KPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EEEECGGGHHHHHHHHHHTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHcCCeeEEEc----------CCCCHHHHHHHHHHHHHH
Confidence 6543222 23445556 678877 899999999999999885
No 98
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=51.50 E-value=1e+02 Score=25.32 Aligned_cols=107 Identities=11% Similarity=0.084 Sum_probs=61.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHH-----cCCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR-----YGTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma-----~G~Pv 501 (609)
.+++|+.+.. .....+.++.... ..+. ..-+...+...+ ...|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~iLivdd~~-~~~~~l~~~l~~~-~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~i 79 (140)
T 3n53_A 4 KKILIIDQQD-FSRIELKNFLDSE-YLVI--ESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPL 79 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTT-SEEE--EESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHhc-ceEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCE
Confidence 4566676543 3444555544433 2222 222444433333 346888886554 345666666665 46777
Q ss_pred EEcCCC----CcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-... ...+.+..|..+++. -|-+.+++.++|.+++..
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 80 ILLFSSEHKEAIVNGLHSGADDYLT----------KPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp EEEECC----CTTTTTTCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhcCCCeeee----------CCCCHHHHHHHHHHHHhh
Confidence 654322 234455667888987 899999999999999875
No 99
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=50.97 E-value=10 Score=35.02 Aligned_cols=33 Identities=24% Similarity=0.515 Sum_probs=24.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 77666543 36665 45788899999999998755
No 100
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=50.77 E-value=98 Score=25.03 Aligned_cols=109 Identities=14% Similarity=0.111 Sum_probs=65.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc---CCceEE
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPIV 503 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI~ 503 (609)
++++|+.+.. ...+.+..+..+.+..+... .-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|.
T Consensus 2 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~-~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 2 LNAIIIDDHP-LAIAAIRNLLIKNDIEILAE-LTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIII 79 (134)
T ss_dssp EEEEEECCCH-HHHHHHHHHHHHTTEEEEEE-ESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEE
T ss_pred eEEEEEcCCH-HHHHHHHHHHhhCCcEEEEE-cCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEE
Confidence 4677777654 34555555555555223211 12223222222 457888886654 4467777776653 556655
Q ss_pred cCCC----CcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 504 ASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 504 s~~g----g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-... ...+.+..|..+++. -|-+.+++.++|..++..
T Consensus 80 ~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 80 VSAKNDHFYGKHCADAGANGFVS----------KKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp EECC---CTHHHHHHTTCSEEEE----------GGGCTHHHHHHHHHHHTT
T ss_pred EeCCCChHHHHHHHHhCCCEEEe----------CCCCHHHHHHHHHHHHCC
Confidence 4322 233445667888987 888999999999998875
No 101
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=50.70 E-value=1e+02 Score=25.11 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=66.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--h-CcEEEecCCC-CCCcHHHHHHHHc----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--G-ADFILIPSRF-EPCGLIQLHAMRY----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~-aDv~v~pS~~-E~~gl~~lEAma~----G~P 500 (609)
..+++|+.+.. .....+.++....+-.+.. .-+.......+. . .|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 83 (136)
T 3hdv_A 7 RPLVLVVDDNA-VNREALILYLKSRGIDAVG--ADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALS 83 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCCEEE--ESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCE
T ss_pred CCeEEEECCCH-HHHHHHHHHHHHcCceEEE--eCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCC
Confidence 45677777654 3455555555555433433 223333333332 2 5788776554 4567788887754 356
Q ss_pred eEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 501 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|...... ..+.+..|..+++. .|-+.+++.++|++++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 84 IIVVSGDTDVEEAVDVMHLGVVDFLL----------KPVDLGKLLELVNKELKI 127 (136)
T ss_dssp EEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCCChHHHHHHHhCCcceEEe----------CCCCHHHHHHHHHHHhcC
Confidence 66544322 23345567889987 899999999999998875
No 102
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=50.57 E-value=1e+02 Score=25.12 Aligned_cols=109 Identities=15% Similarity=0.150 Sum_probs=67.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
..+++|+.+.. .....+.++....+..+.. .-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~~~~v~~--~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 7 ALKILIVEDDT-DAREWLSTIISNHFPEVWS--AGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp CCCEEEECSCH-HHHHHHHHHHHTTCSCEEE--ESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccEEEEEeCCH-HHHHHHHHHHHhcCcEEEE--ECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 45777887654 3444555554443323322 22334333333 356888886654 4567777776654 57777
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+-.... ..+.+..|..+++. .|-+.+++.++|.+++..
T Consensus 84 ~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIELGVHLFLP----------KPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp ECCCCCCHHHHHHHHHHCCSEECC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEecCcChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHHH
Confidence 655433 23345567888875 899999999999999875
No 103
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=50.50 E-value=10 Score=40.23 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=30.1
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhC-CCeEEEEeecC
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRY 128 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh~V~vit~~~ 128 (609)
++|+|+++.. | ..|=-.-+..|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 3478888863 3 244555678899999998 99999999764
No 104
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=50.49 E-value=9.4 Score=38.84 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=24.5
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEE
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vi 124 (609)
.|||++|... | +|+. +|..|+++|++|+|+
T Consensus 1 sm~V~IVGaG--p----aGl~-----~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAG--I----GGTC-----LAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCS--H----HHHH-----HHHHHHHTTCEEEEE
T ss_pred CCEEEEECcC--H----HHHH-----HHHHHHhCCCCEEEE
Confidence 3899999853 3 5665 788999999999988
No 105
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=49.82 E-value=17 Score=35.87 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=29.5
Q ss_pred HHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007300 468 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 510 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 510 (609)
+..++..+|+++--+.-+..--.+..++..|+|+|+..+|...
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 4457889999986554333222355678999999998877533
No 106
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=48.70 E-value=16 Score=32.33 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=30.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+++.. .+ +|....+...++..|.+.|++|.++-..
T Consensus 1 Mkv~IvY~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYL--SD---YGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEEC--TT---STTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEE--CC---ChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 78888754 23 6999999999999999999999888654
No 107
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=48.35 E-value=17 Score=33.89 Aligned_cols=38 Identities=24% Similarity=0.083 Sum_probs=29.8
Q ss_pred CCCceEEEEEeecCCccccchHHHH--hhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~--~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+++||++.. +||.+.+ ...|.+.|.+.|++|.++.+.
T Consensus 3 l~~k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 3 LKGKRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp CTTCEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 3467887766 3555666 678999999999999999876
No 108
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.35 E-value=18 Score=30.28 Aligned_cols=34 Identities=29% Similarity=0.550 Sum_probs=23.9
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+|||++++. |.+| ..+++.|.+.||+|.++...
T Consensus 3 ~~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 3589988862 3344 34788899999999988754
No 109
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=48.28 E-value=12 Score=35.80 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=28.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDG-I------YSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCCC-C------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999888762 2 2233777899999888 99999998654
No 110
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.63 E-value=13 Score=34.41 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=23.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 5 ~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 56665442 35555 45788899999999998865
No 111
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=47.21 E-value=13 Score=35.74 Aligned_cols=38 Identities=26% Similarity=0.370 Sum_probs=29.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
||||+.+..- . .+.-+..|.++|.+.| +|.|++|..++
T Consensus 2 M~ILlTNDDG-i------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDG-Y------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEECCCC-C------CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 8999988762 1 2223777999999998 99999998654
No 112
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=46.54 E-value=14 Score=35.59 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=28.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDG-I------QSKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCC-C------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999888762 2 1223777889998888 99999998654
No 113
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=46.53 E-value=1.2e+02 Score=24.74 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=67.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHh-CCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CC
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 499 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~ 499 (609)
..+++|+.+.. .....+.++... .+-.+.. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 8 ~~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~-~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 85 (143)
T 3cnb_A 8 DFSILIIEDDK-EFADMLTQFLENLFPYAKIK-IAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANI 85 (143)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHHCTTCEEE-EECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTS
T ss_pred CceEEEEECCH-HHHHHHHHHHHhccCccEEE-EECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCC
Confidence 46777777654 344555555444 4433122 2223344433433 46888886654 4467777877765 56
Q ss_pred ceEEcC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 500 VPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 500 PvI~s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
|+|.-. ... ..+.+..|..+++. .|-+.+++.++|.+++...
T Consensus 86 ~ii~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 86 IVIAMTGALTDDNVSRIVALGAETCFG----------KPLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp EEEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCCCHHHHHHHHhcCCcEEEe----------CCCCHHHHHHHHHHHHHhh
Confidence 766543 322 23345567888887 8999999999999998764
No 114
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=46.21 E-value=1.2e+02 Score=24.55 Aligned_cols=110 Identities=14% Similarity=0.196 Sum_probs=66.4
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH-H--hCcEEEecCCC-CCCcHHHHHHHHc-----CC
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-A--GADFILIPSRF-EPCGLIQLHAMRY-----GT 499 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l-~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~ 499 (609)
..+++|+.+.. ...+.+.++..+.+-.... ...+.......+ . ..|++++-... +.-|+.+++.+.. .+
T Consensus 5 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~v~-~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~ 82 (129)
T 3h1g_A 5 SMKLLVVDDSS-TMRRIIKNTLSRLGYEDVL-EAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEI 82 (129)
T ss_dssp -CCEEEECSCH-HHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTC
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCcEEE-EeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 34677777654 3555555555555432121 222343333333 2 46888875544 4567888888764 56
Q ss_pred ceEEcCC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 500 VPIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 500 PvI~s~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|+|.-.. .. ..+.+..|..+|+. -|-+++++.++|+.++..
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 83 PIIMITAEGGKAEVITALKAGVNNYIV----------KPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp CEEEEESCCSHHHHHHHHHHTCCEEEE----------SCCCHHHHHHHHHHHHCC
T ss_pred eEEEEeCCCChHHHHHHHHcCccEEEe----------CCCCHHHHHHHHHHHhcc
Confidence 7765443 22 22345568889987 899999999999988753
No 115
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=46.08 E-value=1.4e+02 Score=25.29 Aligned_cols=111 Identities=13% Similarity=0.190 Sum_probs=71.4
Q ss_pred cCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH-----cC
Q 007300 427 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YG 498 (609)
Q Consensus 427 ~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma-----~G 498 (609)
+.+.+++|+-+.+ ...+.+.++-...+-.+.. .--++..+-..+. .-|++++=-.. +--|+-+++.+. ..
T Consensus 10 ~k~~rILiVDD~~-~~r~~l~~~L~~~G~~~v~-~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ 87 (134)
T 3to5_A 10 NKNMKILIVDDFS-TMRRIVKNLLRDLGFNNTQ-EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKH 87 (134)
T ss_dssp CTTCCEEEECSCH-HHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCCCEEEEEeCCH-HHHHHHHHHHHHcCCcEEE-EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCC
Confidence 3577888887654 4556666666666532222 2235555544443 45888876554 456888888875 45
Q ss_pred CceEEcCCCCcc----cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 499 TVPIVASTGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 499 ~PvI~s~~gg~~----e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
+|||.-...+-. +..+-|.++|+. -|-+++++.++|.++++
T Consensus 88 ipvI~lTa~~~~~~~~~~~~~Ga~~yl~----------KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 88 LPVLMITAEAKREQIIEAAQAGVNGYIV----------KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHCC
T ss_pred CeEEEEECCCCHHHHHHHHHCCCCEEEE----------CCCCHHHHHHHHHHHHh
Confidence 787654433322 234568889987 89999999999998764
No 116
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=45.65 E-value=13 Score=34.42 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=24.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 67776553 36666 46788899999999998865
No 117
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=45.27 E-value=23 Score=30.40 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=31.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+++... .+|....+...++..|.+.|++|.++...
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 577777542 36889999999999999999999988755
No 118
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=44.70 E-value=1.4e+02 Score=24.93 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=63.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh---CcEEEecCCC-CCCcHHHHHHHH---cCCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~---aDv~v~pS~~-E~~gl~~lEAma---~G~Pv 501 (609)
.++++|+.+.. .....+..+....++.......-+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 3 ~~~iLivdd~~-~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 81 (154)
T 2qsj_A 3 LTVVLIVDDHH-LIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAV 81 (154)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeE
Confidence 35677777654 3445555554444221122222344555445544 6888886554 335676676665 36777
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-.... ..+.+..|..+++. -|-+.+++.++|.+++..
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 82 ALISGETDHELIRAALEAGADGFIP----------KSADPQVLIHAVSLILEG 124 (154)
T ss_dssp EEC-----CHHHHHHHHTTCCBBCC----------TTSCHHHHHHHHHHHHTT
T ss_pred EEEeCCCCHHHHHHHHHccCCEEEe----------CCCCHHHHHHHHHHHHcC
Confidence 7654332 23344567788865 888999999999999875
No 119
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=44.46 E-value=1.4e+02 Score=24.89 Aligned_cols=111 Identities=9% Similarity=0.065 Sum_probs=67.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH---------hCcEEEecCCC-CCCcHHHHHHHHc-
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMRY- 497 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~---------~aDv~v~pS~~-E~~gl~~lEAma~- 497 (609)
..+++|+.+.. .....+..+....+........-+...+...+. ..|++++-... +.-|+.+++.+..
T Consensus 8 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~ 86 (149)
T 1i3c_A 8 PKVILLVEDSK-ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQN 86 (149)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHC
T ss_pred CCeEEEEECCH-HHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhC
Confidence 46777777654 345555555554442122222234444444554 46888886554 3457777777753
Q ss_pred ----CCceEEcC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 498 ----GTVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 498 ----G~PvI~s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+|+|.-. ... ..+.++.|..+|+. -|-+.+++.++|++++..
T Consensus 87 ~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 137 (149)
T 1i3c_A 87 PDLKRIPVVVLTTSHNEDDVIASYELHVNCYLT----------KSRNLKDLFKMVQGIESF 137 (149)
T ss_dssp TTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred cCcCCCeEEEEECCCChHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHHH
Confidence 46765543 322 23345567889987 889999999999887653
No 120
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=44.40 E-value=14 Score=36.54 Aligned_cols=42 Identities=29% Similarity=0.444 Sum_probs=28.8
Q ss_pred ccccccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 76 SLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 76 ~~~~~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
..+...+++|+|++.+. +|++| ..+++.|.++||+|.++...
T Consensus 12 ~~~~~~~~~~~vlVTGa-------sG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGG-------AGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp --CCSTTTCCEEEEETT-------TSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred cCCcccCCCCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 34445566788876653 36666 45788899999999888754
No 121
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=44.37 E-value=72 Score=26.48 Aligned_cols=68 Identities=19% Similarity=0.343 Sum_probs=45.0
Q ss_pred HhCcEEEecCCC-CCCcHHHHHHHHc---CCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHH
Q 007300 473 AGADFILIPSRF-EPCGLIQLHAMRY---GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 544 (609)
Q Consensus 473 ~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I 544 (609)
...|++++-... +.-|+.+++.+.. .+|+|.-.... ..+.+..|..+|+. -|-+.++|..+|
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i 135 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLR----------WPLEPRALDDAL 135 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEE----------SSCCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEc----------CCCCHHHHHHHH
Confidence 356888776554 2345556665543 56776543322 23345667888887 899999999999
Q ss_pred HHHHHh
Q 007300 545 RRALAT 550 (609)
Q Consensus 545 ~~ll~~ 550 (609)
.+++..
T Consensus 136 ~~~~~~ 141 (146)
T 4dad_A 136 KRAAAQ 141 (146)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 998874
No 122
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=44.23 E-value=15 Score=35.97 Aligned_cols=38 Identities=21% Similarity=0.142 Sum_probs=28.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i------~ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDG-V------HSPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCC-C------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999888762 2 1223677889999988 99999998654
No 123
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=44.13 E-value=18 Score=33.53 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=29.9
Q ss_pred CCCceEEEEEeecCCccccchHHHH--hhchhHHHHhCCCeEEEEeecC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~--~~~La~aL~~~Gh~V~vit~~~ 128 (609)
.+++||++-. +|+.+.+ ...|.+.|.+.|++|.++.+..
T Consensus 5 l~~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 3467887765 3555555 8889999999999999998763
No 124
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=44.12 E-value=24 Score=33.28 Aligned_cols=40 Identities=10% Similarity=0.115 Sum_probs=32.2
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.+||.+||+.. .+ .-|=..++..|+++|+++|++|..+=|
T Consensus 2 ~~mk~i~Itgt-~t---~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGT-DT---EVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEES-SS---SSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeC-CC---CCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 46898999875 12 357778889999999999999988754
No 125
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=44.10 E-value=1.3e+02 Score=24.60 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=67.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCC--ceEEEeecChHHHHHHHH------------hCcEEEecCCC-CCCcHHHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHMIIA------------GADFILIPSRF-EPCGLIQLH 493 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~--~v~~~~~~~~~~~~~~l~------------~aDv~v~pS~~-E~~gl~~lE 493 (609)
..+++|+.+.. .....+.++....+. .+. ..-+...+...+. ..|++++-... +.-|+.+++
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~~v~--~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~ 82 (149)
T 1k66_A 6 TQPLLVVEDSD-EDFSTFQRLLQREGVVNPIY--RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQ 82 (149)
T ss_dssp TSCEEEECCCH-HHHHHHHHHHHHTTBCSCEE--EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHH
T ss_pred CccEEEEECCH-HHHHHHHHHHHHcCCCceEE--EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHH
Confidence 45677777654 345555555555543 232 2234444444554 46888886655 446777888
Q ss_pred HHH-----cCCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 494 AMR-----YGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 494 Ama-----~G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+. ..+|+|+-.... ..+.+..|..+++. -|-+.+++.+.|.+++..
T Consensus 83 ~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 83 EIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV----------KPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp HHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 775 356766543322 23344567888987 889999999999998764
No 126
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=43.60 E-value=17 Score=35.11 Aligned_cols=35 Identities=34% Similarity=0.395 Sum_probs=25.0
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|||++++ . |++|. .|++.|.++||+|.+++..
T Consensus 1 M~~~~ilVtG-a-------G~iG~---~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG-C-------GDLGL---ELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC-C-------SHHHH---HHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC-C-------CHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 4567887765 1 44443 4788899999999999865
No 127
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=42.89 E-value=58 Score=29.33 Aligned_cols=136 Identities=12% Similarity=0.031 Sum_probs=71.2
Q ss_pred cEEEEEeccc---cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec-ChHHH--------
Q 007300 401 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLA-------- 468 (609)
Q Consensus 401 ~~i~~iGrl~---~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~-------- 468 (609)
+.|..+|.=. ...+.+..-+..+.|.+.++.+| .|.+.........+-+.+.+..+.....- +.+..
T Consensus 14 ~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lV-sGGg~~Gim~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i 92 (176)
T 2iz6_A 14 PIIGVMGPGKADTAENQLVMANELGKQIATHGWILL-TGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPI 92 (176)
T ss_dssp CEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEE-EECSSSSHHHHHHHHHHHTTCCEEEEECC-----CCTTCSEEE
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEE-ECCCccCHhHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeE
Confidence 3454455422 23444444455555555676555 44442235555555555555445444321 11110
Q ss_pred ---------HHHHHhCcEEEecCCCCCCcH--HHHHHHHcCCceEEcCCCCcc-cccccCc-ceeEecccccccccCCCC
Q 007300 469 ---------HMIIAGADFILIPSRFEPCGL--IQLHAMRYGTVPIVASTGGLV-DTVEEGF-TGFQMGSFSVDCEAVDPV 535 (609)
Q Consensus 469 ---------~~~l~~aDv~v~pS~~E~~gl--~~lEAma~G~PvI~s~~gg~~-e~i~~~~-~G~l~~~~~~~~~~v~~~ 535 (609)
..+...+|.+|.-. -++|. .+.||+..++||++-+.-+.. .++.+.. ..+. ..+
T Consensus 93 ~~~~~~~Rk~~m~~~sda~Ivlp--Gg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~-----------~~~ 159 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVG--MGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVH-----------VAA 159 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEES--CCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEE-----------EES
T ss_pred EcCCHHHHHHHHHHhCCEEEEec--CCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEE-----------EcC
Confidence 01445677655432 13554 488999999999998762211 1222211 2222 467
Q ss_pred CHHHHHHHHHHHHHh
Q 007300 536 DVAAVSTTVRRALAT 550 (609)
Q Consensus 536 d~~~la~~I~~ll~~ 550 (609)
|++++.+.|.+.+..
T Consensus 160 ~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 160 DVAGAIAAVKQLLAK 174 (176)
T ss_dssp SHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHh
Confidence 899999999887753
No 128
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=42.71 E-value=17 Score=34.96 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=28.7
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCC
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~ 130 (609)
.||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 ~M~ILlTNDDG-i------~apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDDG-V------HAPGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCeEEEEcCCC-C------CCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 38999888762 2 1223677888898886 99999998654
No 129
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=42.51 E-value=1.4e+02 Score=24.40 Aligned_cols=111 Identities=7% Similarity=0.004 Sum_probs=68.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh-------CcEEEecCCC-CCCcHHHHHHHHc---
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------ADFILIPSRF-EPCGLIQLHAMRY--- 497 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~-------aDv~v~pS~~-E~~gl~~lEAma~--- 497 (609)
..+++|+.+.. .....+..+....+........-+...+...+.. .|++++-... +.-|+.+++.+..
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 9 IDSVLLIDDDD-IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp EEEEEEECSCH-HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred cceEEEEeCCH-HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 35677777654 3555666665555531122222355555445544 7888886654 4567777777654
Q ss_pred ----CCceEEcCCCCc----ccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 498 ----GTVPIVASTGGL----VDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 498 ----G~PvI~s~~gg~----~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+|+|......- .+....+ ..+|+. -|-+.+++.++|.+....
T Consensus 88 ~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 88 PMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVS----------KPLTANALNNLYNKVLNE 139 (146)
T ss_dssp GGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEEC----------SSCCHHHHHHHHHHHHCC
T ss_pred hccCCCeEEEEeCCCChHHHHHHHhcCCcceeee----------CCCCHHHHHHHHHHHHHh
Confidence 566665543332 2334455 778876 899999999999998875
No 130
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=42.24 E-value=1.1e+02 Score=23.55 Aligned_cols=105 Identities=12% Similarity=0.023 Sum_probs=60.5
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH-----cCCceE
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 502 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma-----~G~PvI 502 (609)
+++++.+.. ...+.+.+.....+-++.. .-+.......+. ..|++++-... +.-|..+++.+. ..+|+|
T Consensus 3 ~iliv~~~~-~~~~~l~~~l~~~g~~v~~--~~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii 79 (119)
T 2j48_A 3 HILLLEEED-EAATVVCEMLTAAGFKVIW--LVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLV 79 (119)
T ss_dssp EEEEECCCH-HHHHHHHHHHHHTTCEEEE--ESCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCE
T ss_pred EEEEEeCCH-HHHHHHHHHHHhCCcEEEE--ecCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEE
Confidence 566776654 3444555544444433332 223333333332 46888876554 445777787775 456776
Q ss_pred EcC-CCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHH
Q 007300 503 VAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 548 (609)
Q Consensus 503 ~s~-~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll 548 (609)
.-. .....+....|..+++. .|-+.+++.+.|.+++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~ 116 (119)
T 2j48_A 80 LFLGEPPVDPLLTAQASAILS----------KPLDPQLLLTTLQGLC 116 (119)
T ss_dssp EEESSCCSSHHHHHHCSEECS----------SCSTTHHHHHHHHTTC
T ss_pred EEeCCCCchhhhhcCHHHhcc----------CCCCHHHHHHHHHHHh
Confidence 543 22222455566777765 7888999999887754
No 131
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=42.22 E-value=1.3e+02 Score=24.49 Aligned_cols=108 Identities=18% Similarity=0.192 Sum_probs=63.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh--CcEEEecCCC------CCCcHHHHHHHH---cC
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF------EPCGLIQLHAMR---YG 498 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDv~v~pS~~------E~~gl~~lEAma---~G 498 (609)
.+++|+.+.. .....+.+.....+-.+. ..-+...+...+.. .|++++-... +.-|+.+++.+. ..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNK-GVLTAVQLLLKNHFSKVI--TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTTSSEEE--EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCH-HHHHHHHHHHHhCCcEEE--EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 4667777654 344555555544443332 22244444444443 5777775543 335666666654 36
Q ss_pred CceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 499 TVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 499 ~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+|.-.... ..+.+..|..+++. .|-+.+++.++|.+++..
T Consensus 81 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 81 LPVVLFTAYADIDLAVRGIKEGASDFVV----------KPWDNQKLLETLLNAASQ 126 (140)
T ss_dssp CCEEEEEEGGGHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHcCchheee----------CCCCHHHHHHHHHHHHHh
Confidence 7776543222 23345567888887 889999999999998875
No 132
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=42.21 E-value=1.4e+02 Score=24.38 Aligned_cols=109 Identities=13% Similarity=0.158 Sum_probs=64.7
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCCC-CCcHHHHHHHHc--CCceEE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFE-PCGLIQLHAMRY--GTVPIV 503 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~E-~~gl~~lEAma~--G~PvI~ 503 (609)
..+++|+.+.+ ...+.+..+....+-.+. ..-+.......+. ..|++++-.... .-|+.+++.+.. .+|+|.
T Consensus 4 ~~~Ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ 80 (136)
T 2qzj_A 4 QTKILIIDGDK-DNCQKLKGFLEEKGISID--LAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVY 80 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEE
Confidence 35677777654 344455555444432222 2234444433433 358888755442 356777777653 567665
Q ss_pred cCC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 504 AST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 504 s~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-.. .. ..+.++.|..+++. -|-+.+++..+|..++..
T Consensus 81 ls~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 81 MTYINEDQSILNALNSGGDDYLI----------KPLNLEILYAKVKAILRR 121 (136)
T ss_dssp EESCCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHHH
Confidence 432 22 23445567889987 899999999999988764
No 133
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=42.12 E-value=17 Score=34.85 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=27.2
Q ss_pred ceEEEEEeecCCccccchH--HHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~--~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+.|+ . .||+ .+...+|+.+|+++|++|.++=..
T Consensus 1 M~vI~vs-~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIY-G------KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEE-E------CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEe-c------CCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 6766665 2 3544 467789999999999999888655
No 134
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=42.08 E-value=1.3e+02 Score=24.10 Aligned_cols=107 Identities=11% Similarity=0.017 Sum_probs=63.6
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~Pv 501 (609)
.+++|+.+.. .....+..+.. .+ .......+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~ilivdd~~-~~~~~l~~~l~-~~--~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pi 80 (133)
T 3nhm_A 5 PKVLIVENSW-TMRETLRLLLS-GE--FDCTTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPV 80 (133)
T ss_dssp CEEEEECSCH-HHHHHHHHHHT-TT--SEEEEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCE
T ss_pred CEEEEEcCCH-HHHHHHHHHHh-CC--cEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCE
Confidence 4677777654 34444444443 22 22222334444433443 46888876554 4567777777764 6777
Q ss_pred EEcCCCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-.... ..+.+..|..+++. .|-+.+++.++|.+++..
T Consensus 81 i~~s~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 81 IFVSGYAPRTEGPADQPVPDAYLV----------KPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp EEEESCCC-----TTSCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHhHHHHhhcCCceEEe----------ccCCHHHHHHHHHHHHhh
Confidence 6543221 23455567788876 899999999999999986
No 135
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=41.57 E-value=1.5e+02 Score=24.64 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=62.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
..+++|+.+.. .....+.++....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 14 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 90 (153)
T 3hv2_A 14 RPEILLVDSQE-VILQRLQQLLSPLPYTLH--FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRI 90 (153)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTTSSCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CceEEEECCCH-HHHHHHHHHhcccCcEEE--EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEE
Confidence 35566666543 234444444444432222 2223333333333 35777776554 445666666654 367776
Q ss_pred EcCCCCc----ccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGGL----VDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg~----~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+-....- .+.+..| ..+|+. -|-+.+++..+|.+++..
T Consensus 91 ~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 91 LLTGDPDLKLIAKAINEGEIYRYLS----------KPWDDQELLLALRQALEH 133 (153)
T ss_dssp EECCCCCHHHHHHHHHTTCCSEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHhCCCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 6543332 2344556 678876 899999999999999875
No 136
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=41.13 E-value=1.3e+02 Score=23.73 Aligned_cols=107 Identities=16% Similarity=0.135 Sum_probs=62.9
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc-----CCceE
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY-----GTVPI 502 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~-----G~PvI 502 (609)
+++|+.+.+ ...+.+..+....+-.+. ...+.......+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 3 ~ilivdd~~-~~~~~l~~~L~~~~~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii 79 (124)
T 1mb3_A 3 KVLIVEDNE-LNMKLFHDLLEAQGYETL--QTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVV 79 (124)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEE
Confidence 456666544 344555555444443332 223444433333 346888876544 3457777777753 56776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+..+.|..+++. -|-+.+++.++|.+++..
T Consensus 80 ~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 80 AVTAFAMKGDEERIREGGCEAYIS----------KPISVVHFLETIKRLLER 121 (124)
T ss_dssp EEC------CHHHHHHHTCSEEEC----------SSCCHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 554322 23344567888876 889999999999988753
No 137
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=41.11 E-value=1.6e+02 Score=24.67 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=68.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH-----cCCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma-----~G~P 500 (609)
..+++|+.+.. .....+.++....+-.+ ...-+...+...+. ..|++++-... +.-|+.+++.+. ..+|
T Consensus 7 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 7 AGEILIVEDSP-TQAEHLKHILEETGYQT--EHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred CCcEEEEeCCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 46777777654 34555555555544323 22234444444443 35888886654 446777887775 3567
Q ss_pred eEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 501 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+-.... ..+.+..|..+|+. -|-+.+++..+|.+++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLECGADDFIT----------KPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp EEEEECCCSHHHHHHHHHHCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 76544322 23345567888887 899999999999999875
No 138
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=41.10 E-value=24 Score=30.22 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=30.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+++... + +|....+...+++.+.+.|++|.++...
T Consensus 1 mki~iiy~S--~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS--T---TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC--S---SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC--C---cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 788887532 3 6888889999999999999999887654
No 139
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=40.60 E-value=20 Score=35.90 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=25.9
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|||++|.. |.+|.. ++..|++.||+|+++...
T Consensus 1 M~~mkI~IiGa--------G~~G~~---~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGA--------GAVGGY---LGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESC--------CHHHHH---HHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECc--------CHHHHH---HHHHHHHCCCEEEEEECh
Confidence 45689999973 555533 677889999999998853
No 140
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=40.53 E-value=1.5e+02 Score=24.24 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=68.7
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH---hCcEEEecCCC-C-CCcHHHHHHHH--cCCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRF-E-PCGLIQLHAMR--YGTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~---~aDv~v~pS~~-E-~~gl~~lEAma--~G~Pv 501 (609)
+.+++|+.+.. .....+.++....+-.+. ...+...+...+. ..|++++-... + .-|+.+++.+. ..+|+
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~i 81 (140)
T 3h5i_A 5 DKKILIVEDSK-FQAKTIANILNKYGYTVE--IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPV 81 (140)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCE
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCEEE--EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCE
Confidence 45677777654 345555555555553332 3334555544553 35888887665 4 56777776665 36777
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|+-.... ..+.+..|..+|+. -|-+.+++.++|.+++..
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 82 VFLTAHTEPAVVEKIRSVTAYGYVM----------KSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEESSSSCCCCGGGGGSCEEEEEE----------TTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHhCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 6543322 33455567888887 899999999999999875
No 141
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=40.51 E-value=36 Score=29.78 Aligned_cols=39 Identities=23% Similarity=0.072 Sum_probs=26.9
Q ss_pred CCCceEEEEE--eecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVG--TEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs--~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
...||++++- ++ +| -+-.....|+..|.++||+|+|-+-
T Consensus 4 ~~~m~~LilLGCPE-~P-----vq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 4 ESTGKALMVLGCPE-SP-----VQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp --CCEEEEECCCSC-ST-----THHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceeeeEEecCCC-Cc-----chhhHHHHHHHHHHhcCCeeEEecC
Confidence 3469988774 44 23 2444667788999999999988763
No 142
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=40.38 E-value=33 Score=32.88 Aligned_cols=41 Identities=24% Similarity=0.216 Sum_probs=33.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.+.||.+||+.. ...-|=..++..|+++|.++|++|..+=|
T Consensus 23 ~~~m~~i~Itgt----~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 23 QSHMTILVVTGT----GTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CSSCEEEEEEES----STTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCEEEEEeC----CCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 356899999875 22457788899999999999999998875
No 143
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=39.82 E-value=17 Score=36.19 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=25.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|.+|+|++++. +|++|. .++++|.++||+|.+++..
T Consensus 8 M~~~~IlVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGA-------TGFIGQ---FVATASLDAHRPTYILARP 43 (346)
T ss_dssp ---CCEEEECT-------TSHHHH---HHHHHHHHTTCCEEEEECS
T ss_pred CCCCeEEEECC-------CcHHHH---HHHHHHHHCCCCEEEEECC
Confidence 55678887764 366664 4678899999999998865
No 144
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=39.81 E-value=19 Score=34.48 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=27.7
Q ss_pred ceEEEEEeecCCccccchH--HHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~--~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||+.|++. .||. .+...+|+.+|+++|++|.++=...
T Consensus 18 ~~vI~v~s~------kGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 57 (262)
T 2ph1_A 18 KSRIAVMSG------KGGVGKSTVTALLAVHYARQGKKVGILDADF 57 (262)
T ss_dssp SCEEEEECS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 455555543 3554 4678889999999999998887653
No 145
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=39.81 E-value=24 Score=33.22 Aligned_cols=41 Identities=17% Similarity=0.068 Sum_probs=29.5
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||++|... |. +.+=...+.....+.|.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--pr-~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--QE-PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--SC-TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--CC-CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 4899999875 53 22224556666777788889999998765
No 146
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=39.76 E-value=17 Score=35.88 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=24.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|+|++.+. +|++| ..+++.|.++||+|.++...
T Consensus 1 m~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGI-------RGQDG---AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 44677765543 35655 45788899999999888754
No 147
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=39.60 E-value=18 Score=33.81 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=28.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||++ +.. + .-|-.+...+|+.+|+++|++|.+|=...
T Consensus 1 mkI~v-s~k--G---GvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AGK--G---GVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-ECS--S---SHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEE-ecC--C---CCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78888 531 1 22445677889999999999999987663
No 148
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=39.51 E-value=1.6e+02 Score=24.37 Aligned_cols=111 Identities=15% Similarity=0.093 Sum_probs=65.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
..+++|+.+.. ...+.+.++..+.+........-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 15 ~~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 93 (152)
T 3eul_A 15 KVRVVVGDDHP-LFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVL 93 (152)
T ss_dssp CEEEEEECSSH-HHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEEEcCCH-HHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEE
Confidence 56677777654 24444444444443211111122333333333 356888876554 4457777776653 56665
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+++. -|.+.+++.++|.+++..
T Consensus 94 ~~s~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 94 LISAHDEPAIVYQALQQGAAGFLL----------KDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEccCCHHHHHHHHHcCCCEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 543322 23455668889987 899999999999999876
No 149
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.10 E-value=39 Score=32.79 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=34.8
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC-hhhHHHHHHHHHh
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL 452 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~ 452 (609)
..+|+|++.-.. -.-+.++++++++++.++.+-++|-|. ..-.+.++.+...
T Consensus 108 ~rIIlf~ds~~~-~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~ 160 (268)
T 4b4t_W 108 QRIVAFVCSPIS-DSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAA 160 (268)
T ss_dssp EEEEEEECSCCS-SCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHH
T ss_pred eEEEEEECCCCC-CCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHH
Confidence 357788766433 255678888888888899998888764 2234556666554
No 150
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=39.08 E-value=74 Score=29.97 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=22.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC--CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~--Gh~V~vit~~ 127 (609)
|||+|+.+. .+.....+..+|.+. +++|..+...
T Consensus 23 ~rI~~l~SG---------~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 23 IRIGVLISG---------SGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp EEEEEEESS---------CCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred cEEEEEEeC---------CcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 799999742 234566777888766 6787655544
No 151
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=39.05 E-value=24 Score=35.31 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=24.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|||++|+. |.+|.. ++..|++.||+|+++...
T Consensus 2 m~~mki~iiG~--------G~~G~~---~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGL--------GNGGHA---FAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECC--------SHHHHH---HHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECC--------CHHHHH---HHHHHHhCCCEEEEEeCC
Confidence 44589999973 545533 677888999999887654
No 152
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=38.87 E-value=24 Score=32.32 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=31.4
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||+++-. +.+|....+...++..|.+.|++|.++...
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 467776643 237999999999999999999999887654
No 153
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=38.63 E-value=1.6e+02 Score=24.03 Aligned_cols=107 Identities=17% Similarity=0.200 Sum_probs=62.5
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHH---cCCceEEc
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR---YGTVPIVA 504 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~s 504 (609)
+++|+.+.. .....+..+....+-.+. ..-+...+...+ ...|++++-... +.-|+.+++.+. ..+|+|.-
T Consensus 6 ~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~l 82 (137)
T 3cfy_A 6 RVLLVEDST-SLAILYKQYVKDEPYDIF--HVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIA 82 (137)
T ss_dssp EEEEECSCT-THHHHHHHHTTTSSSEEE--EESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHhcCceEE--EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 566777654 244445444443332222 222444433333 346888876554 345666777664 35666554
Q ss_pred CCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 505 STGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 505 ~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.... ..+.+..|..+++. -|-+.+++...|.+++..
T Consensus 83 s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 83 TAHGSVDLAVNLIQKGAEDFLE----------KPINADRLKTSVALHLKR 122 (137)
T ss_dssp ESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EecCcHHHHHHHHHCCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 3322 23345567888987 889999999999988764
No 154
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=37.63 E-value=34 Score=30.90 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=31.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|... | .|-...+...+++.+.+.|++|.++...
T Consensus 6 ~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 6 PYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred ceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 599998754 4 5778888888999999999999988754
No 155
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=37.02 E-value=1.6e+02 Score=23.46 Aligned_cols=109 Identities=14% Similarity=0.230 Sum_probs=65.7
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
+.+++++.+.+ ...+.+..+....+-.+. ..-+.......+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 3 ~~~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 79 (126)
T 1dbw_A 3 DYTVHIVDDEE-PVRKSLAFMLTMNGFAVK--MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSI 79 (126)
T ss_dssp CCEEEEEESSH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEcCCH-HHHHHHHHHHHhCCcEEE--EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 35677777654 344455555444443332 2234444444444 35888875544 335666776664 356776
Q ss_pred EcC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-. ... ..+.++.|..+|+. -|-+.+++.++|++++..
T Consensus 80 ~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 121 (126)
T 1dbw_A 80 VITGHGDVPMAVEAMKAGAVDFIE----------KPFEDTVIIEAIERASEH 121 (126)
T ss_dssp EEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHTT
T ss_pred EEECCCCHHHHHHHHHhCHHHhee----------CCCCHHHHHHHHHHHHHh
Confidence 543 222 23445568889987 899999999999988764
No 156
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=36.94 E-value=28 Score=31.48 Aligned_cols=37 Identities=14% Similarity=0.281 Sum_probs=28.8
Q ss_pred ceEEEEEeecCCccccc--hHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~G--G~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+.|++. .| |-.+...+|+..|+++|++|.++-..
T Consensus 1 M~vi~v~s~------kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP------KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS------STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 787777653 34 45567788999999999999998765
No 157
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=36.67 E-value=40 Score=27.73 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK 132 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~ 132 (609)
.+.|||++++.. ....+.++..+-++..++|.+|.+.+..+....
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~ 48 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGAHY 48 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCT
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHHHH
Confidence 357999999864 234455556666677788999999886555433
No 158
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=36.43 E-value=93 Score=29.58 Aligned_cols=78 Identities=12% Similarity=0.094 Sum_probs=45.9
Q ss_pred EEEEEeC-CChhhHHHHHHHHHhCCC-ceEEEeecChHHHHHHHH-hCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007300 431 QIIVLGT-GKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 507 (609)
Q Consensus 431 ~lvivG~-g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~~l~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 507 (609)
++.|+|. |. +-+.+.+.....++ ++....... +.+..++. .+|+++=-+.-+..--.+..+...|+|+|+..+|
T Consensus 2 kV~V~Ga~G~--mG~~i~~~~~~~~~~elva~~d~~-~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 2 RVGVLGAKGK--VGTTMVRAVAAADDLTLSAELDAG-DPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp EEEEETTTSH--HHHHHHHHHHHCTTCEEEEEECTT-CCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred EEEEECCCCH--HHHHHHHHHHhCCCCEEEEEEccC-CCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 6788995 76 66666665554432 344333322 22233444 7999994444444433355668899999998776
Q ss_pred Cccc
Q 007300 508 GLVD 511 (609)
Q Consensus 508 g~~e 511 (609)
...+
T Consensus 79 ~~~e 82 (245)
T 1p9l_A 79 FTAE 82 (245)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5443
No 159
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=36.37 E-value=1.8e+02 Score=23.95 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=63.4
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH-------cC
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-------YG 498 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma-------~G 498 (609)
..+++|+.+.. .....+..+....+..+.. .-+.+.+...+. ..|++++-... +.-|+.+++.+. ..
T Consensus 14 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~ 90 (143)
T 3m6m_D 14 SMRMLVADDHE-ANRMVLQRLLEKAGHKVLC--VNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRY 90 (143)
T ss_dssp -CEEEEECSSH-HHHHHHHHHHHC--CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred cceEEEEeCCH-HHHHHHHHHHHHcCCeEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCC
Confidence 46777777654 3445555555444433322 224444433443 46888876554 445777777764 13
Q ss_pred CceEEcCCCCcc----cccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 499 TVPIVASTGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 499 ~PvI~s~~gg~~----e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+|+.....-. +....|..+|+. -|-+.+++.++|.++...
T Consensus 91 ~pii~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 91 TPVVVLSADVTPEAIRACEQAGARAFLA----------KPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCEEEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHC--
T ss_pred CeEEEEeCCCCHHHHHHHHHcChhheee----------CCCCHHHHHHHHHHHHHh
Confidence 677665433322 344567889987 899999999999987653
No 160
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.30 E-value=1.6e+02 Score=23.47 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=64.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+.. .....+.++..+.+-.+. ..-+...+...+ ...|++++-... +.-|+.+++.+.. ..|
T Consensus 6 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (132)
T 3lte_A 6 SKRILVVDDDQ-AMAAAIERVLKRDHWQVE--IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPK 82 (132)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCE
T ss_pred CccEEEEECCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCe
Confidence 45677777654 344555555544443232 223444443333 345888876554 4457778887763 344
Q ss_pred eEEcCCCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 501 PIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|.+.... ..+.+..|..+++. .|-+.+++.++|.+....
T Consensus 83 ii~~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 83 ILVVSGLDKAKLQQAVTEGADDYLE----------KPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp EEEECCSCSHHHHHHHHHTCCEEEC----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCChHHHHHHHHhChHHHhh----------CCCCHHHHHHHHHHHcCC
Confidence 55444322 22345567888876 899999999999988764
No 161
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=36.24 E-value=34 Score=32.58 Aligned_cols=42 Identities=19% Similarity=0.087 Sum_probs=28.2
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
|++++|++|++. |++..= .++.....++++|++|.+++...+
T Consensus 1 ~~~~~vL~v~aH--PDDe~l----~~Ggtia~~~~~G~~V~vv~lT~G 42 (242)
T 2ixd_A 1 MSGLHILAFGAH--ADDVEI----GMAGTIAKYTKQGYEVGICDLTEA 42 (242)
T ss_dssp -CCCSEEEEESS--TTHHHH----HHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCCccEEEEEeC--CChHHH----hHHHHHHHHHHCCCeEEEEEEcCC
Confidence 567899999984 764322 233344567789999999986543
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=35.86 E-value=32 Score=29.70 Aligned_cols=35 Identities=14% Similarity=0.062 Sum_probs=25.4
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|.++||++++. |.+-..+++.|.+.||+|+++...
T Consensus 1 ~~~~~vlI~G~-----------G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH-----------SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC-----------CHHHHHHHHHHHHCCCCEEEEECC
Confidence 44567777752 233456888899999999999875
No 163
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=35.82 E-value=19 Score=34.53 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=28.2
Q ss_pred CCceEEEEEeecCCccccchH--HHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~--~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++|||+.|.+. .||. .+...+|+.+|+ +|++|.++=..
T Consensus 25 ~~~~vI~v~s~------kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASI------KGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCS------SSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeC------CCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 35777776643 3555 467788999999 99999999766
No 164
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=35.80 E-value=26 Score=32.85 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=22.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||.++|+.- +||+| ..+++.|+++||+|.++...
T Consensus 1 Mk~vlVtGa------sg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGS------ASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 555555522 45655 45788899999999887654
No 165
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=35.41 E-value=17 Score=35.59 Aligned_cols=35 Identities=14% Similarity=0.306 Sum_probs=23.5
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
|++|||++++. +|++| ..|++.|.++||+|.++..
T Consensus 1 M~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIAGH-------RGMVG---SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEETT-------TSHHH---HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEec
Confidence 45678766543 35555 4578889999999877653
No 166
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=35.37 E-value=1.8e+02 Score=23.72 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=22.7
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
|++++|++|... + .....+...|.+.|+.+.+.+.
T Consensus 3 ~~~~~ILivdd~--~--------~~~~~l~~~L~~~~~~~~v~~~ 37 (144)
T 3kht_A 3 LRSKRVLVVEDN--P--------DDIALIRRVLDRKDIHCQLEFV 37 (144)
T ss_dssp --CEEEEEECCC--H--------HHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEEEeCC--H--------HHHHHHHHHHHhcCCCeeEEEE
Confidence 456899999865 1 2345577788889998555443
No 167
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=35.33 E-value=1.8e+02 Score=23.66 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=67.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHh-CCCceEEEeecChHHHHHHHHh---CcEEEecCCCC--CCcHHHHHHHHc-----
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAG---ADFILIPSRFE--PCGLIQLHAMRY----- 497 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~~l~~---aDv~v~pS~~E--~~gl~~lEAma~----- 497 (609)
..+++|+.+.. .....+..+... .+-.+. ..-+...+...+.. .|++++-.... .-|+.+++.+..
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3lua_A 4 DGTVLLIDYFE-YEREKTKIIFDNIGEYDFI--EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA 80 (140)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHHCCCEEE--EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhccCccEE--EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC
Confidence 35677777654 345555555555 443333 23344554444444 68888866543 246666766654
Q ss_pred CCceEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 498 GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 498 G~PvI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+|+|.-.... ..+.+..|..+++. -|-+.+++.++|.+++..
T Consensus 81 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 81 NTPVIIATKSDNPGYRHAALKFKVSDYIL----------KPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp TCCEEEEESCCCHHHHHHHHHSCCSEEEE----------SSCCTTHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHHh
Confidence 67776654332 23345567888987 888999999999999875
No 168
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=34.96 E-value=28 Score=32.86 Aligned_cols=34 Identities=26% Similarity=0.524 Sum_probs=24.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGC------ATGIG---AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 676777632 46666 45788899999999877644
No 169
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=34.67 E-value=2.5e+02 Score=25.18 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=66.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
..+++|+.+.+ .....+..+....+-.+. ...+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 7 SPRVLVVDDDS-DVLASLERGLRLSGFEVA--TAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677777654 344445554444443332 2234444433443 46888876554 346777777765 367776
Q ss_pred EcCC-C---CcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VAST-G---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~-g---g~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.. . ...+.+..|..+++. -|.+.+++..+|..++..
T Consensus 84 ~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 84 VLSARSSVDDRVAGLEAGADDYLV----------KPFVLAELVARVKALLRR 125 (233)
T ss_dssp EEECCCTTTCCCTTTTTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 5432 2 234456678889987 899999999999998764
No 170
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=34.49 E-value=30 Score=34.29 Aligned_cols=33 Identities=39% Similarity=0.658 Sum_probs=24.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|.. ++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIGT--------GAIGSF---YGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEESC--------CHHHHH---HHHHHHHTTCEEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHhCCCeEEEEeCC
Confidence 489999973 555543 667788999999998865
No 171
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=33.84 E-value=1.8e+02 Score=23.13 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=65.0
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCceE
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVPI 502 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~PvI 502 (609)
+++|+.+.+ .....+..+....+-.+. ..-+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 4 ~ILivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii 80 (122)
T 3gl9_A 4 KVLLVDDSA-VLRKIVSFNLKKEGYEVI--EAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVI 80 (122)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEE
Confidence 566666544 344555555555443332 2334555444444 35888876554 4467788887743 57776
Q ss_pred EcCC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 503 VAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 503 ~s~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
.-.. +. ..+.+..|..+|+. -|-+.+++.+.|.+++.
T Consensus 81 ~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 81 VLTAKGGEEDESLALSLGARKVMR----------KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp EEESCCSHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred EEecCCchHHHHHHHhcChhhhcc----------CCCCHHHHHHHHHHHhc
Confidence 5443 22 22344567889987 89999999999998764
No 172
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=33.70 E-value=24 Score=35.11 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=25.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+++|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 23 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 23 FSPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HSCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 44677776543 35555 45888899999999988864
No 173
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=33.69 E-value=27 Score=34.68 Aligned_cols=36 Identities=28% Similarity=0.366 Sum_probs=24.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++.|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 25 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 25 KDRKRILITGG-------AGFVG---SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEEcC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 44567765542 35555 45788899999999988754
No 174
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=33.54 E-value=25 Score=35.89 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=25.9
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
..++.++|++|... .+|+. +|..|+++|++|+|+=..
T Consensus 19 ~~~~~~dV~IVGaG------~aGl~-----~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 19 YFQGHMKAIVIGAG------IGGLS-----AAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp ----CCEEEEECCS------HHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred cCCCCCEEEEECCC------HHHHH-----HHHHHHhCCCCEEEEeCC
Confidence 34557899999853 24555 788899999999998543
No 175
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=33.37 E-value=30 Score=34.11 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=24.6
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|.. ++..|+ .||+|+++...
T Consensus 2 ~mkI~IiGa--------Ga~G~~---~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGLL---CAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECC--------SHHHHH---HHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECC--------CHHHHH---HHHHHh-cCCceEEEECC
Confidence 599999983 666653 566688 89999998865
No 176
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=33.14 E-value=23 Score=35.13 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=23.4
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
..++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 16 ~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 345677776543 35555 45788899999999888754
No 177
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=32.91 E-value=22 Score=35.80 Aligned_cols=39 Identities=15% Similarity=0.208 Sum_probs=25.6
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhC-CCeEEEEeecC
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRY 128 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh~V~vit~~~ 128 (609)
..|+.|||++++. +|.+| ..|+++|.++ ||+|.++....
T Consensus 20 ~~m~~~~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 20 GSMKAKKVLILGV-------NGFIG---HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp ---CCCEEEEESC-------SSHHH---HHHHHHHHHHSSCEEEEEESCC
T ss_pred cccCCCEEEEECC-------CChHH---HHHHHHHHhCCCCEEEEEeCCh
Confidence 3355677776553 35555 4577888888 99999998653
No 178
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=32.80 E-value=47 Score=30.37 Aligned_cols=39 Identities=21% Similarity=0.074 Sum_probs=32.1
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|... | .|-...+...+++.+.+.|++|.++-..
T Consensus 6 mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 6 PVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 3799999753 4 5778888888999999999999988754
No 179
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=32.74 E-value=20 Score=32.99 Aligned_cols=41 Identities=10% Similarity=0.090 Sum_probs=23.6
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEE-EEe
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVM-TIA 125 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~-vit 125 (609)
.|.+|||++|+.. |. .+|....+.+........|++|. ++-
T Consensus 3 ~M~~mkIl~I~GS--~r--~~s~t~~la~~~~~~~~~g~~v~~~id 44 (199)
T 4hs4_A 3 TTSPLHFVTLLGS--LR--KASFNAAVARALPEIAPEGIAITPLGS 44 (199)
T ss_dssp --CCEEEEEEECC--CS--TTCHHHHHHHHHHHHCCTTEEEEECCC
T ss_pred CCCCCEEEEEEcC--CC--CCChHHHHHHHHHHHccCCCEEEEEEe
Confidence 3667999999875 43 35544444443333335688887 443
No 180
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=32.68 E-value=1.8e+02 Score=22.92 Aligned_cols=106 Identities=19% Similarity=0.207 Sum_probs=63.2
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH--cCCceEEcC
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVAS 505 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma--~G~PvI~s~ 505 (609)
+++|+.+.+ .....+..+....+-.+. ...+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|.-.
T Consensus 4 ~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t 80 (120)
T 3f6p_A 4 KILVVDDEK-PIADILEFNLRKEGYEVH--CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLT 80 (120)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEE
T ss_pred eEEEEECCH-HHHHHHHHHHHhCCEEEE--EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 566776654 344455554444443332 2234454444443 45888876554 345666776664 356776543
Q ss_pred CCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 506 TGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 506 ~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
... ..+.+..|..+|+. -|-+.+++..+|++++.
T Consensus 81 ~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 81 AKDSEIDKVIGLEIGADDYVT----------KPFSTRELLARVKANLR 118 (120)
T ss_dssp ESSCHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHh
Confidence 322 22345568889987 88999999999988775
No 181
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=32.66 E-value=76 Score=29.45 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=24.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCC--CeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G--h~V~vit~~ 127 (609)
|.++||+++.+ |.|..+..|..++.+.+ ++|..+.++
T Consensus 5 m~~~ri~vl~S---------G~gsnl~all~~~~~~~l~~~I~~Visn 43 (209)
T 4ds3_A 5 MKRNRVVIFIS---------GGGSNMEALIRAAQAPGFPAEIVAVFSD 43 (209)
T ss_dssp -CCEEEEEEES---------SCCHHHHHHHHHHTSTTCSEEEEEEEES
T ss_pred CCCccEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEEC
Confidence 66789988874 33456777777776543 577666654
No 182
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=32.26 E-value=1.4e+02 Score=29.77 Aligned_cols=84 Identities=8% Similarity=0.056 Sum_probs=54.1
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEee
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.+++.+|-- +...|.|+|-+ ..=...++.++..+ ++++.++++.. +.+.+..++.+.+.+..+...
T Consensus 147 Ti~e~~g~l---~glkva~vGD~--~rva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~-- 216 (323)
T 3gd5_A 147 TIRENFGRL---AGLKLAYVGDG--NNVAHSLLLGCAKV---GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQIL-- 216 (323)
T ss_dssp HHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEE--
T ss_pred HHHHHhCCC---CCCEEEEECCC--CcHHHHHHHHHHHc---CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEE--
Confidence 456666632 33689999987 33356677777777 78999999743 334555555555555445432
Q ss_pred cChHHHHHHHHhCcEEEecCC
Q 007300 463 FNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~ 483 (609)
.++.+.++.||++.....
T Consensus 217 ---~d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 217 ---RDPFEAARGAHILYTDVW 234 (323)
T ss_dssp ---SCHHHHHTTCSEEEECCC
T ss_pred ---CCHHHHhcCCCEEEEece
Confidence 123347899999877653
No 183
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=32.25 E-value=1.7e+02 Score=23.81 Aligned_cols=108 Identities=14% Similarity=0.163 Sum_probs=63.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCCCC-CcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEP-CGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~E~-~gl~~lEAma---~G~PvI 502 (609)
..+++|+.+.. .....+.+.....+-.+. ..-+...+...+. ..|++++-. ..+ -|+.+++.+. ..+|+|
T Consensus 4 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 4 TPTVMVVDESR-ITFLAVKNALEKDGFNVI--WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHGGGTCEEE--EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEE
Confidence 34667776543 344555555444443332 2224444444443 358887765 422 4555565554 357776
Q ss_pred EcCCC-C---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTG-G---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~g-g---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-... . ..+.+..|..+++. .|-+.+++.+.|.+++..
T Consensus 80 ~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 80 VLSAYVDKDLIINSVKAGAVDYIL----------KPFRLDYLLERVKKIISS 121 (142)
T ss_dssp EEESCCCHHHHHHHHHHTCSCEEE----------SSCCHHHHHHHHHHHHHC
T ss_pred EEECCCCHHHHHHHHHCCcceeEe----------CCCCHHHHHHHHHHHHhh
Confidence 54322 2 23344567788876 889999999999999875
No 184
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=32.20 E-value=24 Score=34.81 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=22.7
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCC--CeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G--h~V~vit~ 126 (609)
|++|||++.+. +|++| ..+++.|.++| |+|.++..
T Consensus 1 M~~m~vlVTGa-------tG~iG---~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGG-------MGFIG---SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECC-------CchHH---HHHHHHHHHhCCCCEEEEEec
Confidence 45788765543 35555 45678888886 88887764
No 185
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=32.19 E-value=72 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=22.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCC--eEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh--~V~vit~~ 127 (609)
|||+|+.+. .+.....+..++.+.+| +|..+...
T Consensus 2 ~rI~vl~SG---------~g~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVSG---------RGSNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp EEEEEEECS---------CCHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CEEEEEEeC---------CcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 689988642 23467778888888888 65544444
No 186
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=32.16 E-value=40 Score=30.44 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=26.7
Q ss_pred CceEEEEEeecCCccccchHH-HHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~-~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+||++..+ ||.+ ....+|.+.|.+.|++|.++.+.
T Consensus 5 ~k~IllgvT--------Gs~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 5 GENVLICLC--------GSVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CCEEEEEEC--------SSGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 478877764 3333 24567899999999999999876
No 187
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=32.13 E-value=2e+02 Score=23.18 Aligned_cols=110 Identities=12% Similarity=0.051 Sum_probs=64.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCCC--CCcHHHHHHHH--cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRFE--PCGLIQLHAMR--YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~E--~~gl~~lEAma--~G~PvI 502 (609)
..+++|+.+.. ...+.+.++....+-.+.. ..-+...+...+ ...|++++-.... .-|+.+++.+. ..+|+|
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~-~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii 86 (140)
T 3cg0_A 9 LPGVLIVEDGR-LAAATLRIQLESLGYDVLG-VFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPII 86 (140)
T ss_dssp CCEEEEECCBH-HHHHHHHHHHHHHTCEEEE-EESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCeeEE-EECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEE
Confidence 56777777654 3444444444443322321 122333333333 2468888865542 35666666654 478876
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+++. .|-+.+++..+|.+++..
T Consensus 87 ~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 87 FITSSQDVETFQRAKRVNPFGYLA----------KPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp EEECCCCHHHHHHHHTTCCSEEEE----------ESCCHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHhcCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 544322 22345567788876 889999999999998875
No 188
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=32.09 E-value=35 Score=34.35 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=27.8
Q ss_pred CceEEEEEeecCCccccchHH--HHhhchhHHHHhCCCeEEEEeecC
Q 007300 84 GLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~--~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
+|+++.|... .||.| +...+||.+|+++|++|.++....
T Consensus 24 ~~~~i~v~sg------KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGG------KGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEEC------SSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeC------CCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4554444432 35544 567789999999999999999764
No 189
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=31.92 E-value=25 Score=32.72 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=25.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCC--eEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh--~V~vit~~ 127 (609)
|++|+|++.+. +||+|. .+++.|.++|| +|.++...
T Consensus 16 m~~~~vlVtGa-------sg~iG~---~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGA-------SGETGR---VLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECT-------TSHHHH---HHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECC-------CcHHHH---HHHHHHHcCCCCCEEEEEEcC
Confidence 44567665543 466664 47888999999 99888755
No 190
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=31.89 E-value=26 Score=32.52 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=23.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGA------SSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777642 46666 46888999999999887654
No 191
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=31.82 E-value=1.2e+02 Score=30.12 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=32.2
Q ss_pred HHHHHHhCcEEEec--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++. ..-+. ++-..++.|.-|..+|-+..|++.+
T Consensus 188 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 45689999998764 32243 4556888888899888888888654
No 192
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=31.81 E-value=35 Score=34.56 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=26.2
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++.|||++|.. |.+| ..++..|++.||+|+++...
T Consensus 27 ~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 44689999984 3333 23788899999999988754
No 193
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=31.49 E-value=1e+02 Score=26.78 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=37.4
Q ss_pred CCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 498 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 498 G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.+-|.+++-||++.+.-.+..-+. +..-|.++++|.|++.|.+.|..++++
T Consensus 66 ~~eveg~sGgGlVkVtvnG~~ev~--~I~Idp~lldpeD~E~LeDLI~aAvNd 116 (143)
T 1ybx_A 66 EKTVEASAGGGAVTVVATGRKDIK--EITIKPEVVDPDDVEMLQDLILAAVNE 116 (143)
T ss_dssp HCEEEEEETTTTEEEEEETTCCEE--EEEECGGGCCTTCHHHHHHHHHHHHHH
T ss_pred cCEEEEEECCCEEEEEEecCceEE--EEEECHHHcCCcCHHHHHHHHHHHHHH
Confidence 455777788888887776643222 233366788999999999999999886
No 194
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=31.47 E-value=29 Score=35.41 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=25.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|+|++|+.. .+|+. .|..|+++|++|+|+=..
T Consensus 1 m~~~~v~iiG~G------~~Gl~-----~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAG------FSGAV-----IGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCS------HHHHH-----HHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcC------HHHHH-----HHHHHHHCCCcEEEEEec
Confidence 456899999853 24444 677888999999999754
No 195
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=31.26 E-value=3.1e+02 Score=25.14 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=65.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
..+++|+.+.+ .....+..+....+-.+. ...+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 23 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 99 (250)
T 3r0j_A 23 EARVLVVDDEA-NIVELLSVSLKFQGFEVY--TATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPAL 99 (250)
T ss_dssp SCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677776654 234444444444442232 223444443333 346888876544 4457777777653 56776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+|+. -|.+.+++..+|..++..
T Consensus 100 ~lt~~~~~~~~~~~~~~Ga~~yl~----------Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 100 FLTARDSLQDKIAGLTLGGDDYVT----------KPFSLEEVVARLRVILRR 141 (250)
T ss_dssp EEECSTTHHHHHHHHTSTTCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHcCCcEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 544322 22345567889987 899999999999998863
No 196
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.21 E-value=2.3e+02 Score=23.51 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=64.8
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
..+++|+.+.. .....+.......+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 7 NYTVMLVDDEQ-PILNSLKRLIKRLGCNII--TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 56777777654 344555555444443232 2234444444443 35888876554 345666666664 367776
Q ss_pred EcCCCC----cccccccC-cceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~-~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..| ..+++. .|-+.+++..+|..++..
T Consensus 84 ~ls~~~~~~~~~~~~~~g~~~~~l~----------kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 84 VISGYADAQATIDAVNRGKISRFLL----------KPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp EEECGGGHHHHHHHHHTTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHhccchheeee----------CCCCHHHHHHHHHHHHHH
Confidence 543322 22333445 778876 889999999999998875
No 197
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=31.17 E-value=39 Score=31.43 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=24.5
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+++|+|++... .||+|. .+++.|+++|++|.++...
T Consensus 5 ~~~~~vlVTGa-------sggiG~---~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALVTGA-------GKGIGR---DTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEEEST-------TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCC-------CchHHH---HHHHHHHHCCCEEEEEeCC
Confidence 44555554432 466664 5788999999999887654
No 198
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=31.16 E-value=54 Score=31.75 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=34.5
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|+.||-+||+...-- .=|=|.....+..-|..+|++|+++-..
T Consensus 19 ~~~~~KyIfVTGGVvS---~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 19 YFQSMKYILVTGGVIS---GIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp --CCCEEEEEEECSSS---SSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccceEEEEcCCccc---ccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 4678999999976532 3467778888999999999999998754
No 199
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=31.11 E-value=33 Score=32.52 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=20.4
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|++| ..++++++++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666 44799999999999999865
No 200
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=31.05 E-value=1e+02 Score=28.72 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=23.8
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHh-CCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~-~Gh~V~vit~~ 127 (609)
.+|||+++.+ |.|..+..|..++.+ .+++|..+.++
T Consensus 4 ~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~ 40 (215)
T 3tqr_A 4 EPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISN 40 (215)
T ss_dssp CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEES
T ss_pred CCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeC
Confidence 4689988874 234556677777655 46787776665
No 201
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=31.01 E-value=21 Score=34.88 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=25.2
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|. .++..|++.||+|+++...
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEec
Confidence 489999973 66664 3667788899999998865
No 202
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=31.00 E-value=74 Score=31.54 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=32.6
Q ss_pred HHHHHHHHhCcEEEec--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 466 PLAHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
..+.++++.||++++. ..-+. ++-..+..|.-|..+|-+..|++.+
T Consensus 185 ~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 235 (315)
T 3pp8_A 185 EELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQ 235 (315)
T ss_dssp HHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBC
T ss_pred CCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhh
Confidence 4567799999998764 33233 4455777777888888888887655
No 203
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=30.91 E-value=33 Score=33.77 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=24.6
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++.+. +|++| ..+++.|.++||+|.+++..
T Consensus 13 ~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 478776543 35555 45788899999999988765
No 204
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=30.80 E-value=1.3e+02 Score=30.23 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=32.8
Q ss_pred HHHHHHhCcEEEecCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++... -+. ++-..+..|.-|..+|-+..|++.+
T Consensus 194 l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd 242 (343)
T 2yq5_A 194 FDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVD 242 (343)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBC
T ss_pred HHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhh
Confidence 4568999999877432 243 4556888898999999998888665
No 205
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=30.68 E-value=2e+02 Score=22.75 Aligned_cols=110 Identities=13% Similarity=0.195 Sum_probs=65.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+.+ ...+.+..+....+..... ..-+.......+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~~~~~~~v~-~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ 81 (128)
T 1jbe_A 4 ELKFLVVDDFS-TMRRIVRNLLKELGFNNVE-EAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALP 81 (128)
T ss_dssp TCCEEEECSCH-HHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCC
T ss_pred ccEEEEECCCH-HHHHHHHHHHHHcCCcEEE-eeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCc
Confidence 45677777654 3445555554444421111 1223344333443 35888876554 3467778888764 466
Q ss_pred eEEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 501 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|.-.... ..+.++.|..+++. -|-+.+++.++|.+++..
T Consensus 82 ii~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 82 VLMVTAEAKKENIIAAAQAGASGYVV----------KPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp EEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCccHHHHHHHHHhCcCceee----------cCCCHHHHHHHHHHHHHH
Confidence 65543222 23345567888987 899999999999988753
No 206
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=30.35 E-value=31 Score=34.93 Aligned_cols=37 Identities=19% Similarity=0.342 Sum_probs=28.0
Q ss_pred ceEEEEEeecCCccccchHH--HHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~--~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+.|.+. .||+| +.+.+|+.+|+++|++|.+|=..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 677666643 45555 56677999999999999998765
No 207
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=29.88 E-value=34 Score=33.30 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=24.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++++. +|.+| ..|++.|.++||+|.+++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGG-------TGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 367765543 34444 55788999999999888865
No 208
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=29.82 E-value=36 Score=33.13 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=24.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|. .++..|++.||+|+++..+
T Consensus 3 ~m~i~iiG~--------G~~G~---~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMGS---RLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECC--------SHHHH---HHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECc--------CHHHH---HHHHHHHhCCCcEEEEECC
Confidence 389999873 44443 3678899999999988654
No 209
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=29.78 E-value=39 Score=33.64 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=25.3
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.|||.||. .||.| +..+++.|.++||+|++.=.
T Consensus 4 ~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEcC
Confidence 46898887 47777 44578889999999987643
No 210
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=29.76 E-value=30 Score=34.42 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=25.5
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 7 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTGH-------TGFKG---GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEECC-------CchHH---HHHHHHHHhCCCeEEEEeCC
Confidence 45677766543 35555 45788899999999888754
No 211
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=29.71 E-value=34 Score=33.74 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=23.8
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|.. ++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~~---~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGLY---YGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHHH---HHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHHH---HHHHHHHCCCeEEEEEcC
Confidence 489999974 444533 577888999999998865
No 212
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=29.69 E-value=44 Score=30.17 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=30.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|... .|-...+...+++.+.+.|++|.++-..
T Consensus 5 mkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 5 PNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred cEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 799998753 4777888888999999899999988754
No 213
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=29.64 E-value=34 Score=32.74 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=26.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|..+|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 23 m~~~k~vlITGa------s~gIG---~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGG------SRGIG---AAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 555678887732 46666 46889999999999776443
No 214
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.58 E-value=2.4e+02 Score=23.34 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=64.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
..+++|+.+.. .....+..+....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 3 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii 79 (155)
T 1qkk_A 3 APSVFLIDDDR-DLRKAMQQTLELAGFTVS--SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMI 79 (155)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEE
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHcCcEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEE
Confidence 34677777654 344455555444443332 2234444433332 46888876554 345666666654 367776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+-.... ..+.+..|..+++. .|.+.+++...|..++..
T Consensus 80 ~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 80 LVTGHGDIPMAVQAIQDGAYDFIA----------KPFAADRLVQSARRAEEK 121 (155)
T ss_dssp EEECGGGHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHhcCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 553322 23345567888887 889999999999998875
No 215
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.28 E-value=39 Score=33.27 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=24.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|+|++.+. +||+| ..+++.|.++||+|.++...
T Consensus 5 ~~~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTGG-------AGYIG---SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CcEEEEecC-------CcHHH---HHHHHHHHHCCCcEEEEecC
Confidence 466655432 46666 45788999999999888654
No 216
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=29.14 E-value=45 Score=31.01 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=28.9
Q ss_pred CceEEEEEeecCCccccc--hHHHHhhchhHHHHhC-CCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTG--GLGDVLGGLPPALAAN-GHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~G--G~~~~~~~La~aL~~~-Gh~V~vit~~ 127 (609)
.|||+.|++. .| |-.+...+|+.+|+++ |++|.++=..
T Consensus 3 ~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 3 AKRVFGFVSA------KGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp CCEEEEEEES------STTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCeEEEEECC------CCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 5777666653 34 4556778899999999 9999998765
No 217
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=28.97 E-value=53 Score=29.46 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=31.3
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHh-CCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~-~Gh~V~vit~~ 127 (609)
|||++|... + .|-...+...+++.+.+ .|++|.++-..
T Consensus 2 mkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 689988754 4 57788888889999988 89999998765
No 218
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=28.75 E-value=51 Score=31.80 Aligned_cols=39 Identities=21% Similarity=0.155 Sum_probs=28.2
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||+.|+ . -+ .-|-.+...+|+.+|+++|++|.+|=..
T Consensus 1 ~MkvIavs-~-KG---GvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 1 AMRQCAIY-G-KG---GIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CCEEEEEE-E-CT---TSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEe-C-CC---cCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 47877775 2 11 2245567779999999999999888655
No 219
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=28.74 E-value=2.6e+02 Score=27.43 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=55.1
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEee
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.+++.+|-- +...|.|+|-. ...=..-++.++.++ ++++.++++.. +.+.+.+++.+.+.+.++...
T Consensus 138 Ti~e~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~-- 208 (307)
T 2i6u_A 138 TIAERKGAL---RGLRLSYFGDG-ANNMAHSLLLGGVTA---GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVT-- 208 (307)
T ss_dssp HHHHHHSCC---TTCEEEEESCT-TSHHHHHHHHHHHHT---TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEE--
T ss_pred HHHHHhCCc---CCeEEEEECCC-CcCcHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE--
Confidence 455666632 23689999986 334456778888877 78999999853 234455565666666545433
Q ss_pred cChHHHHHHHHhCcEEEecCC
Q 007300 463 FNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~ 483 (609)
.++.+.+..||++.....
T Consensus 209 ---~d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 209 ---ADAHAAAAGADVLVTDTW 226 (307)
T ss_dssp ---SCHHHHHTTCSEEEECCS
T ss_pred ---ECHHHHhcCCCEEEecce
Confidence 223357899999888654
No 220
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=28.73 E-value=25 Score=34.81 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=21.7
Q ss_pred ccCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 80 ~~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
..++.|||++.+. +|++| ..|++.|.++|+++.|++.
T Consensus 20 ~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~~v~~~ 56 (346)
T 4egb_A 20 FQSNAMNILVTGG-------AGFIG---SNFVHYMLQSYETYKIINF 56 (346)
T ss_dssp ----CEEEEEETT-------TSHHH---HHHHHHHHHHCTTEEEEEE
T ss_pred cccCCCeEEEECC-------ccHHH---HHHHHHHHhhCCCcEEEEE
Confidence 3455677765543 35555 4678889999966655554
No 221
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=28.72 E-value=1.3e+02 Score=28.07 Aligned_cols=105 Identities=11% Similarity=0.106 Sum_probs=59.3
Q ss_pred EEEEEec-cccccCHHHHHHHHhhcccCCeEEEEEeCCC-----hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 402 VIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 402 ~i~~iGr-l~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
+++..+. +....-++.+.++++.+...+.+++|+..+. +.+...+.+...+++-++...-.++ +....+..|
T Consensus 3 llL~S~~~~~~~~~l~~~~~~l~~~~~~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~--d~~~~l~~a 80 (229)
T 1fy2_A 3 LLLLSNSTLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVA--DPLAAIEKA 80 (229)
T ss_dssp EEEESCSCCTTSCTTTTTHHHHHHHHTTCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSS--CHHHHHHHC
T ss_pred EEEEcCCCCCCCcHHHHHHHHHHHHhcCCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccc--cHHHHHhcC
Confidence 3444444 3333234455666666655567888887652 2344444444445553333221112 233578899
Q ss_pred cEEEecCC--------CCCCcH--HHHHHHHcCCceEEcCCCC
Q 007300 476 DFILIPSR--------FEPCGL--IQLHAMRYGTVPIVASTGG 508 (609)
Q Consensus 476 Dv~v~pS~--------~E~~gl--~~lEAma~G~PvI~s~~gg 508 (609)
|.+++|-= +...|+ .+-|+...|+|++.+..|.
T Consensus 81 d~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~ 123 (229)
T 1fy2_A 81 EIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGA 123 (229)
T ss_dssp SEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH
T ss_pred CEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHH
Confidence 99999961 111233 4677778999999998654
No 222
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=28.72 E-value=54 Score=31.62 Aligned_cols=41 Identities=17% Similarity=0.343 Sum_probs=31.2
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++||++.|++.- | .-|-.+...+||.+|++.|.+|.+|-..
T Consensus 80 ~~~kvI~vts~k-g---G~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEA-P---GAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSS-T---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCC-C---CCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 467888887541 2 2356678889999999999999998765
No 223
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=28.71 E-value=35 Score=33.50 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=24.2
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+.|||++.+. +|++| ..+++.|.++||+|.++...
T Consensus 13 ~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGI-------TGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 3678776543 35555 45788899999999888754
No 224
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=28.31 E-value=71 Score=25.98 Aligned_cols=45 Identities=7% Similarity=-0.127 Sum_probs=32.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCCCcc
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK 132 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~~~~ 132 (609)
|..|||+.++.. .-|.+.++..+-+++.++|.++.+.........
T Consensus 1 M~mkkIll~Cg~------G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~ 45 (106)
T 1e2b_A 1 MEKKHIYLFSSA------GMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAG 45 (106)
T ss_dssp CCCEEEEEECSS------STTTHHHHHHHHHHHHHSCCSEEEEEECSSSTT
T ss_pred CCCcEEEEECCC------chhHHHHHHHHHHHHHHCCCCeEEEEecHHHHH
Confidence 334689999864 234456677788888899999998887755443
No 225
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=28.17 E-value=3.2e+02 Score=24.30 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=65.5
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceEE
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 503 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 503 (609)
.+++|+.+.+ .....+..+....+-.+. ...+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|.
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ 79 (225)
T 1kgs_A 3 VRVLVVEDER-DLADLITEALKKEMFTVD--VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLM 79 (225)
T ss_dssp CEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 4566776654 344455554444443332 2334444433433 46888876554 345777777765 3677765
Q ss_pred cCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 504 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 504 s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-.... ..+.+..|..|++. -|-+++++..+|..++..
T Consensus 80 ls~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 120 (225)
T 1kgs_A 80 LTALSDVEYRVKGLNMGADDYLP----------KPFDLRELIARVRALIRR 120 (225)
T ss_dssp EESSCHHHHHHHTCCCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhCCccEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 54322 23445567888987 889999999999998763
No 226
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=28.16 E-value=2.1e+02 Score=27.95 Aligned_cols=107 Identities=12% Similarity=0.072 Sum_probs=63.3
Q ss_pred EEEEEecccccc-CHHHHHHHHhhcccCCeEEEEEeCCC---hhhHHHHHHHHHhCCC-ceEEEee-----cChHHHHHH
Q 007300 402 VIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILYPE-KARGVAK-----FNIPLAHMI 471 (609)
Q Consensus 402 ~i~~iGrl~~~K-g~~~ll~a~~~l~~~~~~lvivG~g~---~~~~~~l~~l~~~~~~-~v~~~~~-----~~~~~~~~~ 471 (609)
.++.+|.-+..+ +.+++-+.++....++.+++++..-. +.+.+...+...+++. .+..+.- .+.+.....
T Consensus 28 ~l~iiGGgedk~~~~~i~~~~v~lagg~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~ 107 (291)
T 3en0_A 28 AILIIGGAEDKVHGREILQTFWSRSGGNDAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLF 107 (291)
T ss_dssp CEEEECSSCCSSSCCHHHHHHHHHTTGGGCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHH
T ss_pred eEEEEECCCCccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHH
Confidence 455566544432 45555555555544567888886532 2344444444445554 3433322 233444568
Q ss_pred HHhCcEEEecCC--------CCCCcH--HHHHHHHcC-CceEEcCCCC
Q 007300 472 IAGADFILIPSR--------FEPCGL--IQLHAMRYG-TVPIVASTGG 508 (609)
Q Consensus 472 l~~aDv~v~pS~--------~E~~gl--~~lEAma~G-~PvI~s~~gg 508 (609)
+..||+++++-= +...++ .+-|+...| +|++.++.|.
T Consensus 108 l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA 155 (291)
T 3en0_A 108 VEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGA 155 (291)
T ss_dssp HHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHH
T ss_pred HhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHH
Confidence 999999999752 234444 477888899 8999988764
No 227
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=28.15 E-value=37 Score=31.45 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=19.0
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++...
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 14 SRGIG---EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 35665 45888999999999887644
No 228
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=28.07 E-value=55 Score=31.22 Aligned_cols=43 Identities=14% Similarity=-0.036 Sum_probs=29.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+..|||++|+.. |. +.|-...++..++..+.+.|++|.++-..
T Consensus 32 ~~~mkIliI~GS--~r-~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 32 THRPRILILYGS--LR-TVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CSCCEEEEEECC--CC-SSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCeEEEEEcc--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 345899999875 43 22334455666777788889999888754
No 229
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=28.03 E-value=3.2e+02 Score=24.70 Aligned_cols=139 Identities=12% Similarity=-0.006 Sum_probs=0.0
Q ss_pred CCCCCCCcEEEEEe-ccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC--------
Q 007300 394 LPVDRNIPVIGFIG-RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-------- 464 (609)
Q Consensus 394 l~~~~~~~~i~~iG-rl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-------- 464 (609)
+|......+-+|.| | ..........+.+.+.....=.-+|.|.|+........+-+.+.+..+.+...-.
T Consensus 8 ~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~ 86 (189)
T 3sbx_A 8 SDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELAD 86 (189)
T ss_dssp -----CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBC
T ss_pred CCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCC
Q ss_pred ------------hHHHHHHHHhCcEEEecCCCCCCcHH--HHHHHH------cCCceEEcCCCCccc-------------
Q 007300 465 ------------IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMR------YGTVPIVASTGGLVD------------- 511 (609)
Q Consensus 465 ------------~~~~~~~l~~aDv~v~pS~~E~~gl~--~lEAma------~G~PvI~s~~gg~~e------------- 511 (609)
......++..||.+|.-.= ++|.- ++|++. +++|||.-+..|..+
T Consensus 87 ~~~~~~i~~~~~~~Rk~~m~~~sda~IalPG--G~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~G 164 (189)
T 3sbx_A 87 HDADELVVTETMWERKQVMEDRANAFITLPG--GVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTG 164 (189)
T ss_dssp TTCSEEEEESSHHHHHHHHHHHCSEEEECSC--CHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTT
T ss_pred CCCCeeEEcCCHHHHHHHHHHHCCEEEEeCC--CcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCC
Q ss_pred ccccCcceeEecccccccccCCCCCHHHHHHHHH
Q 007300 512 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 545 (609)
Q Consensus 512 ~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~ 545 (609)
++.+....++. -.+|++++.+.|+
T Consensus 165 fi~~~~~~~i~----------~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 165 YVSRTAMERLI----------VVDNLDDALQACA 188 (189)
T ss_dssp SSCHHHHHHEE----------EESSHHHHHHHHC
T ss_pred CCCHHHcCeEE----------EeCCHHHHHHHhc
No 230
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=28.00 E-value=44 Score=33.18 Aligned_cols=21 Identities=19% Similarity=0.074 Sum_probs=17.9
Q ss_pred hhchhHHHHhCCCeEEEEeec
Q 007300 107 LGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 107 ~~~La~aL~~~Gh~V~vit~~ 127 (609)
=..+|+++.++|++|++++..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 345899999999999999865
No 231
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=27.89 E-value=35 Score=33.60 Aligned_cols=32 Identities=6% Similarity=0.050 Sum_probs=26.1
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||++++. | ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 589999874 2 3456899999999999999876
No 232
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=27.87 E-value=1.7e+02 Score=29.83 Aligned_cols=81 Identities=16% Similarity=0.205 Sum_probs=52.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec--------ChHHHHHHHHhCcEEEe--cCCCC----C---CcHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFILI--PSRFE----P---CGLIQ 491 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--------~~~~~~~~l~~aDv~v~--pS~~E----~---~gl~~ 491 (609)
+-++-|+|-|. +-..+.+....++-++..+... ....+.++++.||++++ |..-+ . ++-..
T Consensus 119 gktvGIIGlG~--IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~ 196 (381)
T 3oet_A 119 DRTIGIVGVGN--VGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETL 196 (381)
T ss_dssp GCEEEEECCSH--HHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHH
T ss_pred CCEEEEEeECH--HHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHH
Confidence 45677777776 5555555555555445443221 11234568999999876 33334 3 44568
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007300 492 LHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 492 lEAma~G~PvI~s~~gg~~e 511 (609)
++.|.-|..+|-+..|++.+
T Consensus 197 l~~mk~gailIN~aRG~vvd 216 (381)
T 3oet_A 197 IRRLKPGAILINACRGPVVD 216 (381)
T ss_dssp HHHSCTTEEEEECSCGGGBC
T ss_pred HhcCCCCcEEEECCCCcccC
Confidence 88898999999999888665
No 233
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=27.83 E-value=51 Score=31.05 Aligned_cols=25 Identities=24% Similarity=0.442 Sum_probs=19.3
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+|. .+++.|+++|++|.++..+
T Consensus 28 s~gIG~---~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 28 SRGIGR---AVADVLSQEGAEVTICARN 52 (249)
T ss_dssp SSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCHHHH---HHHHHHHHCCCEEEEEcCC
Confidence 467774 4788999999999877644
No 234
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.66 E-value=2.5e+02 Score=22.90 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=58.3
Q ss_pred EEEEEeCCChhhHHHHHHHHHh--CCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceE
Q 007300 431 QIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 502 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 502 (609)
+++|+.+.+ ...+.+..+... .+..+.. ..-+....-..+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 4 ~ILivdd~~-~~~~~l~~~L~~~~~~~~~~~-~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii 81 (141)
T 3cu5_A 4 RILIVDDEK-LTRDGLIANINWKALSFDQID-QADDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVI 81 (141)
T ss_dssp EEEEECSCH-HHHHHHHHHCCGGGSCCSEEE-EESSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHHccCCcEEee-ecccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEE
Confidence 566776654 233334333321 2222221 1223344333443 36888875544 345677777664 467776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+++. -|-+.+++.++|.+++..
T Consensus 82 ~ls~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 123 (141)
T 3cu5_A 82 FMSGYSDKEYLKAAIKFRAIRYVE----------KPIDPSEIMDALKQSIQT 123 (141)
T ss_dssp EECCSTTTCCC------CCCEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHhCCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 543322 33455567788876 889999999999988764
No 235
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=27.62 E-value=35 Score=33.18 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=23.1
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
+|+|++.+. +|++| ..+++.|.++||+|.++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGA-------TGLLG---RAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEC-
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEcc
Confidence 467765543 35555 4578889999999988874
No 236
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=27.56 E-value=2.5e+02 Score=22.89 Aligned_cols=92 Identities=17% Similarity=0.153 Sum_probs=44.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEE-eecChHHHHHHHH---hCcEEEecCCC-CCCcHHHHHHHH--cCCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIA---GADFILIPSRF-EPCGLIQLHAMR--YGTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~-~~~~~~~~~~~l~---~aDv~v~pS~~-E~~gl~~lEAma--~G~Pv 501 (609)
..+++|+.+. +.....+.++..+.++ +... ..-+...+...+. ..|++++-... +.-|+.+++.+. ...|+
T Consensus 13 ~~~vlivdd~-~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~i 90 (145)
T 3kyj_B 13 PYNVMIVDDA-AMMRLYIASFIKTLPD-FKVVAQAANGQEALDKLAAQPNVDLILLDIEMPVMDGMEFLRHAKLKTRAKI 90 (145)
T ss_dssp SEEEEEECSC-HHHHHHHHHHHTTCTT-EEEEEEESSHHHHHHHHHHCTTCCEEEECTTSCCCTTCHHHHHHHHHCCCEE
T ss_pred CCeEEEEcCC-HHHHHHHHHHHHhCCC-ceEEEEECCHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCe
Confidence 3445555543 3355555555554422 2222 2224444433332 36888886554 345666776654 23444
Q ss_pred EEcCC---CC---cccccccCcceeEe
Q 007300 502 IVAST---GG---LVDTVEEGFTGFQM 522 (609)
Q Consensus 502 I~s~~---gg---~~e~i~~~~~G~l~ 522 (609)
|.-.. .. ..+.+..|..+|+.
T Consensus 91 iil~~~~~~~~~~~~~~~~~ga~~~l~ 117 (145)
T 3kyj_B 91 CMLSSVAVSGSPHAARARELGADGVVA 117 (145)
T ss_dssp C-CBSSCSTTSSHHHHHHHTTCSCCCB
T ss_pred EEEEEeccCChHHHHHHHhCCCCEEEe
Confidence 33222 11 22445567788876
No 237
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=27.53 E-value=43 Score=33.30 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=25.1
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+.|||.||.. |.+| ..++..|++.||+|+++...
T Consensus 13 ~~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 3689999984 4444 34778899999999888754
No 238
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=27.39 E-value=45 Score=32.01 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=23.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78888873 4444 34788899999999988654
No 239
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=27.32 E-value=34 Score=33.46 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=22.9
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 13 ~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFGG-------TGYIG---NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEETT-------TSTTH---HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEECC-------CchHH---HHHHHHHHHCCCcEEEEECC
Confidence 6666543 35555 34778899999999988765
No 240
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=27.27 E-value=34 Score=33.79 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=18.0
Q ss_pred cchHHHHhhchhHHHHhC--CCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~--Gh~V~vit~~ 127 (609)
+|++| ..+++.|.++ ||+|.++...
T Consensus 13 tG~iG---~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 13 AGFIG---SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp TSHHH---HHHHHHHHHHCTTCEEEEEECC
T ss_pred ccHHH---HHHHHHHHHhCCCCEEEEEeCC
Confidence 35555 4577888888 8999888753
No 241
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=27.18 E-value=44 Score=30.96 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=25.0
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 2 ~k~vlITGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGA------SRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777743 46666 46889999999998777654
No 242
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=27.18 E-value=1e+02 Score=25.25 Aligned_cols=109 Identities=13% Similarity=0.073 Sum_probs=64.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-C--CCcHHHHHHHHc---CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-E--PCGLIQLHAMRY---GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E--~~gl~~lEAma~---G~Pv 501 (609)
.+++|+.+.. .....+.++....+-.+. ..-+...+...+. ..|++++-... + .-|+.+++.+.. .+|+
T Consensus 7 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~i 83 (136)
T 3kto_A 7 PIIYLVDHQK-DARAALSKLLSPLDVTIQ--CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPT 83 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTSSSEEE--EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCE
T ss_pred CeEEEEcCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCE
Confidence 4667776644 344555555544442232 2223333322222 35777775544 3 456667766653 5677
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
|.-.... ..+.+..|..+|+. .|-+.+++.++|.+++...
T Consensus 84 i~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 84 IVMASSSDIPTAVRAMRASAADFIE----------KPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEE----------SSBCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHcChHHhee----------CCCCHHHHHHHHHHHHhcc
Confidence 6544322 23445678889987 8999999999999998763
No 243
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.08 E-value=38 Score=31.55 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=19.3
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++..+
T Consensus 12 s~gIG---~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 12 KGALG---SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 46666 45888999999999887654
No 244
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=27.07 E-value=46 Score=29.61 Aligned_cols=38 Identities=13% Similarity=0.229 Sum_probs=25.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|||++-+.. +|.. +=..|...|.++||+|.=+.+.
T Consensus 1 m~~MkIaigsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~ 38 (162)
T 2vvp_A 1 MSGMRVYLGADH-------AGYE-LKQRIIEHLKQTGHEPIDCGAL 38 (162)
T ss_dssp --CCEEEEEECH-------HHHH-HHHHHHHHHHHTTCEEEECSCC
T ss_pred CCCCEEEEEeCc-------hhHH-HHHHHHHHHHHCCCEEEEeCCC
Confidence 345898777653 5555 3445778899999999877653
No 245
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=26.96 E-value=40 Score=35.87 Aligned_cols=34 Identities=26% Similarity=0.554 Sum_probs=25.3
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||++.+. +|.+| ..|++.|.++||+|.+++..
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 588876653 35555 45788899999999988865
No 246
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=26.94 E-value=54 Score=31.36 Aligned_cols=25 Identities=32% Similarity=0.587 Sum_probs=19.1
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+|. .+++.|+++|++|.++...
T Consensus 41 sggIG~---~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 41 SGGIGA---AVARALVQQGLKVVGCART 65 (279)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CchHHH---HHHHHHHHCCCEEEEEECC
Confidence 466664 5788899999999887644
No 247
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=26.86 E-value=50 Score=31.38 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=23.3
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+++|+.- .||+|. .+++.|+++|++|.++..+
T Consensus 8 k~vlVTGa------s~gIG~---~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGA------AQGIGR---AFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETT------TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCcHHH---HHHHHHHHCCCEEEEEECC
Confidence 55666632 466664 4788999999999887643
No 248
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=26.85 E-value=37 Score=32.92 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=23.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++.+. +|++| ..|++.|.++||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGG-------AGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 66655442 35555 45788999999999888654
No 249
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=26.58 E-value=2.4e+02 Score=22.30 Aligned_cols=109 Identities=13% Similarity=0.120 Sum_probs=63.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 500 (609)
..+++|+.+.+ .....+..+....+.... ...-+.......+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~ilivdd~~-~~~~~l~~~L~~~g~~~v-~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ 83 (129)
T 1p6q_A 6 KIKVLIVDDQV-TSRLLLGDALQQLGFKQI-TAAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAA 83 (129)
T ss_dssp CCCEEEECSSH-HHHHHHHHHHHTTTCSCE-ECCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCE
T ss_pred cCeEEEEcCCH-HHHHHHHHHHHHCCCcEE-EecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCC
Confidence 34677777654 344455554444332111 11223444434443 35888876554 3457778887753 566
Q ss_pred eEEcCCCCc----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 501 PIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 501 vI~s~~gg~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
+|.-...+- .+.++.|..+++. -|-+.+++..+|.+++.
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~ 126 (129)
T 1p6q_A 84 FIILTAQGDRALVQKAAALGANNVLA----------KPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp EEECCSCCCHHHHHHHHHHTCSCEEC----------CCSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHH
Confidence 766543332 2344567788876 88999999999988775
No 250
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=26.57 E-value=66 Score=30.54 Aligned_cols=39 Identities=18% Similarity=0.269 Sum_probs=31.2
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.||.+||+.. ...-|=..++..|+++|.++|++|..+=|
T Consensus 20 m~k~i~ItgT----~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 20 QGHMLFISAT----NTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CCEEEEEEES----STTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cCcEEEEEeC----CCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4688888865 12357777889999999999999988865
No 251
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=26.47 E-value=3.5e+02 Score=26.68 Aligned_cols=127 Identities=15% Similarity=0.090 Sum_probs=73.8
Q ss_pred hhcCCEEEe--eCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHH
Q 007300 312 ILESDMVLT--VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 389 (609)
Q Consensus 312 ~~~ad~vi~--vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (609)
-+.+|.|+. .++...+++.+. ..+.|| ||-+ ...+|... ..+--.++
T Consensus 99 s~~~D~iviR~~~~~~~~~lA~~-------------~~vPVI-Na~~-~~~HPtQa----------------LaDl~Ti~ 147 (321)
T 1oth_A 99 SSMADAVLARVYKQSDLDTLAKE-------------ASIPII-NGLS-DLYHPIQI----------------LADYLTLQ 147 (321)
T ss_dssp HHHCSEEEEECSCHHHHHHHHHH-------------CSSCEE-ESCC-SSCCHHHH----------------HHHHHHHH
T ss_pred HHhCCEEEEeCCChhHHHHHHHh-------------CCCCEE-cCCC-CCCCcHHH----------------HHHHHHHH
Confidence 345898777 566677776641 144445 5655 66666421 11223456
Q ss_pred HHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEeecCh
Q 007300 390 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 390 ~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~ 465 (609)
+.+|-- +...|.|+|-.. .=..-++.++.++ ++++.+++... +.+.+.+++.+.+.+..+...
T Consensus 148 e~~g~l---~gl~va~vGD~~--~va~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~----- 214 (321)
T 1oth_A 148 EHYSSL---KGLTLSWIGDGN--NILHSIMMSAAKF---GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLT----- 214 (321)
T ss_dssp HHHSCC---TTCEEEEESCSS--HHHHHHHTTTGGG---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEE-----
T ss_pred HHhCCc---CCcEEEEECCch--hhHHHHHHHHHHc---CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE-----
Confidence 666632 236899999863 2234445555555 78999999743 334455555665665445433
Q ss_pred HHHHHHHHhCcEEEecC
Q 007300 466 PLAHMIIAGADFILIPS 482 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS 482 (609)
..+.+.+..||++..-.
T Consensus 215 ~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 215 NDPLEAAHGGNVLITDT 231 (321)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred ECHHHHhccCCEEEEec
Confidence 22335789999988744
No 252
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=26.43 E-value=3.1e+02 Score=24.41 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=64.0
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCCC-CCCcHHHHHHHH---cCCceEEcCC
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMR---YGTVPIVAST 506 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~s~~ 506 (609)
+++|+.+.+ ...+.+..+....+ .+. ...+...+...+...|++++-... +.-|+.+++.+. ..+|+|.-..
T Consensus 4 ~ilivdd~~-~~~~~l~~~L~~~~-~v~--~~~~~~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~ 79 (220)
T 1p2f_A 4 KIAVVDDDK-NILKKVSEKLQQLG-RVK--TFLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTL 79 (220)
T ss_dssp EEEEECSCH-HHHHHHHHHHTTTE-EEE--EESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEES
T ss_pred eEEEEeCCH-HHHHHHHHHHHhCC-CEE--EECCHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEc
Confidence 566666654 34455555554443 222 222334333333567888876544 345777776664 4677765433
Q ss_pred CC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 507 GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 507 gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.. ..+.+..|..|++. -|.+.+++.++|..++..
T Consensus 80 ~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 117 (220)
T 1p2f_A 80 LSDDESVLKGFEAGADDYVT----------KPFNPEILLARVKRFLER 117 (220)
T ss_dssp CCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHcc
Confidence 22 23344567889987 889999999999998764
No 253
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=26.43 E-value=3.6e+02 Score=24.37 Aligned_cols=108 Identities=16% Similarity=0.159 Sum_probs=64.4
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc--CCceEEc
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY--GTVPIVA 504 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~--G~PvI~s 504 (609)
.+++|+.+.+ .....+..+....+-.+. ..-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|.-
T Consensus 6 ~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~l 82 (238)
T 2gwr_A 6 QRILVVDDDA-SLAEMLTIVLRGEGFDTA--VIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVML 82 (238)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECCGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEE
T ss_pred CeEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 4677777654 344455554444443332 222333333333 246888876554 3457777777653 6777654
Q ss_pred CC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 505 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 505 ~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.. .. ..+.+..|..|++. -|.+++++..+|..++..
T Consensus 83 t~~~~~~~~~~~~~~Ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 122 (238)
T 2gwr_A 83 TAKTDTVDVVLGLESGADDYIM----------KPFKPKELVARVRARLRR 122 (238)
T ss_dssp EETTCCSCHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHCCC
T ss_pred eCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 32 22 23445668889987 889999999999988653
No 254
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=26.20 E-value=49 Score=30.90 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=24.4
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGG------RGALG---SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETT------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 3455666632 46666 45788999999999887654
No 255
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=26.18 E-value=33 Score=36.01 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=30.3
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhC--CCeEEEEeecC
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRY 128 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~--Gh~V~vit~~~ 128 (609)
+|+|+++.. | ..|=-.-+..|++.|+++ ||+|+++++..
T Consensus 9 ~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 578988863 4 345445677899999999 99999998764
No 256
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=26.16 E-value=1.7e+02 Score=26.99 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=21.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC--CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~--Gh~V~vit~~ 127 (609)
|||+++.+. . |..+..|..++.+. +|+|..+.+.
T Consensus 1 ~ri~vl~Sg------~---gsnl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLISG------N---GSNLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEESS------C---CHHHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEEC------C---cHHHHHHHHHHHcCCCCceEEEEEeC
Confidence 688888742 1 23466677776654 5787666655
No 257
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.04 E-value=45 Score=33.24 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHh--CCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA--NGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~--~Gh~V~vit~~ 127 (609)
+++|+|++.+. +|++| ..|++.|.+ .||+|.++...
T Consensus 8 ~~~~~vlVTGa-------tG~IG---~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGG-------AGFVG---SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETT-------TSHHH---HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEECC-------CCHHH---HHHHHHHHhhCCCCeEEEEECC
Confidence 45567665542 35555 457888999 99999998754
No 258
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=26.01 E-value=45 Score=32.42 Aligned_cols=25 Identities=20% Similarity=0.213 Sum_probs=18.9
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|++| ..+++.|.++||+|.++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 35555 45788899999999887754
No 259
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=25.92 E-value=3e+02 Score=24.60 Aligned_cols=108 Identities=18% Similarity=0.189 Sum_probs=64.0
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHH--cCCceEEc
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR--YGTVPIVA 504 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma--~G~PvI~s 504 (609)
.+++|+.+.+ ...+.+..+....+-.+. ..-+...+...+ ...|++++-... +.-|+.+++.+. ..+|+|.-
T Consensus 5 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~l 81 (230)
T 2oqr_A 5 TSVLIVEDEE-SLADPLAFLLRKEGFEAT--VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMV 81 (230)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEE
T ss_pred CeEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEE
Confidence 4667776654 344455555444443332 222444443333 246888876544 345666666664 36777654
Q ss_pred CCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 505 STGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 505 ~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.... ..+.+..|..|++. -|.+++++..+|..++..
T Consensus 82 t~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 82 TARDSEIDKVVGLELGADDYVT----------KPYSARELIARIRAVLRR 121 (230)
T ss_dssp ECCHHHHHHHHHHHHCCSCCCC----------SSCCHHHHHHHHHHHHTT
T ss_pred eCCCcHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 4322 22344567788865 889999999999998864
No 260
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=25.91 E-value=68 Score=31.06 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=27.7
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
+|+|++|++. |++-.= .++.+...++++|++|.|++...+
T Consensus 7 ~~rvLvv~aH--PDDe~l----g~GGtia~~~~~G~~V~vv~~T~G 46 (273)
T 3dff_A 7 ATRLLAISPH--LDDAVL----SFGAGLAQAAQDGANVLVYTVFAG 46 (273)
T ss_dssp -CEEEEEESS--TTHHHH----HHHHHHHHHHHTTCEEEEEETTCC
T ss_pred CCCEEEEEeC--CChHHH----hHHHHHHHHHHCCCcEEEEEEeCC
Confidence 6899999984 764322 234456667789999999996543
No 261
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=25.89 E-value=1.8e+02 Score=26.87 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=22.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC--CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~--Gh~V~vit~~ 127 (609)
|||+++... .+.....+..++.+. +|+|..+.+.
T Consensus 4 ~ki~vl~sG---------~g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 4 KRLAVFASG---------SGTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp EEEEEECCS---------SCHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred cEEEEEEEC---------CcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 588777642 233566677888776 6888766655
No 262
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=25.87 E-value=2.2e+02 Score=26.78 Aligned_cols=40 Identities=20% Similarity=0.456 Sum_probs=25.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
.|||++|++.- +-.....+...++.++.-|.+|..+|+.+
T Consensus 1 ~mrilvINPnt-----s~~~T~~i~~~~~~~~~p~~~i~~~t~~~ 40 (245)
T 3qvl_A 1 SVRIQVINPNT-----SLAMTETIGAAARAVAAPGTEILAVCPRA 40 (245)
T ss_dssp CEEEEEECSSC-----CHHHHHHHHHHHHHHCCTTEEEEEECCSS
T ss_pred CCEEEEEeCCC-----CHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 38999999652 33444455556666666677777777653
No 263
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=25.78 E-value=1.4e+02 Score=29.63 Aligned_cols=44 Identities=23% Similarity=0.162 Sum_probs=30.9
Q ss_pred HHHHHHhCcEEEecCCC--CC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSRF--EP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~--E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++.... +. ++-..++.|.-|.-+|-+..|++.+
T Consensus 193 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 241 (333)
T 1j4a_A 193 LDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVD 241 (333)
T ss_dssp HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccC
Confidence 44688999998875432 22 4445778888888888888877554
No 264
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=25.77 E-value=80 Score=27.57 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=31.8
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
..||++|-. .+ +|....+...++..|.+.|++|.++-..
T Consensus 4 ~~kv~IvY~--S~---~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYV--SE---YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEEC--TT---STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEE--CC---ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 357877753 23 6999999999999999999999888755
No 265
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=25.57 E-value=1.4e+02 Score=29.79 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=31.5
Q ss_pred HHHHHHhCcEEEecCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++... -+. ++-..++.|.-|..+|-+..|++.+
T Consensus 191 l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 191 LEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLID 239 (333)
T ss_dssp HHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred HHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccC
Confidence 4468899999877432 232 4455888888898888888887554
No 266
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=25.55 E-value=32 Score=33.38 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=23.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+|++++. +|++|. .++++|.++||+|.+++..
T Consensus 5 ~~ilVtGa-------tG~iG~---~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGA-------TGYIGR---HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEEST-------TSTTHH---HHHHHHHHTTCCEEEECCC
T ss_pred CEEEEEcC-------CcHHHH---HHHHHHHhCCCCEEEEECC
Confidence 56666553 355554 4778899999999887754
No 267
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=25.48 E-value=3.3e+02 Score=23.52 Aligned_cols=109 Identities=13% Similarity=0.170 Sum_probs=66.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh--CcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
..+++|+.+.+ .....+..+....+-.+ ...-+...+-..+.. .|++++-... +.-|+-+++.+.. .+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii 83 (184)
T 3rqi_A 7 DKNFLVIDDNE-VFAGTLARGLERRGYAV--RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARIL 83 (184)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEE--EEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEE
Confidence 45677777654 34455555555544222 223355554444443 5888775543 3457777776643 67776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.+..|..+|+. -|-+.+++..+|..++..
T Consensus 84 ~lt~~~~~~~~~~a~~~Ga~~~l~----------KP~~~~~L~~~i~~~~~~ 125 (184)
T 3rqi_A 84 VLTGYASIATAVQAVKDGADNYLA----------KPANVESILAALQTNASE 125 (184)
T ss_dssp EEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHTSTTHHH
T ss_pred EEeCCCCHHHHHHHHHhCHHHhee----------CCCCHHHHHHHHHHHHHH
Confidence 544322 23455668889987 899999999999988764
No 268
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=25.48 E-value=2.6e+02 Score=22.39 Aligned_cols=109 Identities=14% Similarity=0.159 Sum_probs=63.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec-ChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc---CCceE
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 502 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 502 (609)
.+++|+.+.+ ...+.+..+....+. +...... +.......+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 4 ~~Ilivdd~~-~~~~~l~~~l~~~~~-~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii 81 (133)
T 3b2n_A 4 TSLIIAEDQN-MLRQAMVQLIKLHGD-FEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVI 81 (133)
T ss_dssp EEEEEECSCH-HHHHHHHHHHHHHSS-EEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEECCCH-HHHHHHHHHHhhCCC-cEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEE
Confidence 4566666543 345555555444332 2222222 3444333333 46888886554 3356777777653 56775
Q ss_pred EcC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-. ... ..+.+..|..+++. -|.+.+++.++|++++..
T Consensus 82 ~ls~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 123 (133)
T 3b2n_A 82 IVTTFKRPGYFEKAVVNDVDAYVL----------KERSIEELVETINKVNNG 123 (133)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTSCHHHHHHHHHHHHC-
T ss_pred EEecCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHcC
Confidence 543 222 33455568889987 899999999999988764
No 269
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=25.33 E-value=2.5e+02 Score=27.95 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=55.2
Q ss_pred HHHHH-hCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEe
Q 007300 387 ALQAE-VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 461 (609)
Q Consensus 387 ~~~~~-~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~ 461 (609)
.+++. +|-+. +...|.|+|-. ...=..-++.++.++ ++++.++++.. +.+.+..++.+.+.+.++...
T Consensus 143 Ti~e~~~g~~l--~gl~ia~vGD~-~~~va~Sl~~~~~~~---G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~- 215 (333)
T 1duv_G 143 TMQEHLPGKAF--NEMTLVYAGDA-RNNMGNSMLEAAALT---GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLT- 215 (333)
T ss_dssp HHHHHSTTCCG--GGCEEEEESCT-TSHHHHHHHHHHHHH---CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEE-
T ss_pred HHHHHhcCCCC--CCcEEEEECCC-ccchHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEE-
Confidence 45566 55111 23689999986 233456777788777 78999999743 234455666666776545433
Q ss_pred ecChHHHHHHHHhCcEEEecCC
Q 007300 462 KFNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 462 ~~~~~~~~~~l~~aDv~v~pS~ 483 (609)
..+.+.+..||++.....
T Consensus 216 ----~d~~eav~~aDvvytd~w 233 (333)
T 1duv_G 216 ----EDVAKGVEGADFIYTDVW 233 (333)
T ss_dssp ----SCHHHHHTTCSEEEECCS
T ss_pred ----ECHHHHhCCCCEEEeCCc
Confidence 223357899999887654
No 270
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=25.16 E-value=2.8e+02 Score=28.37 Aligned_cols=48 Identities=23% Similarity=0.305 Sum_probs=33.7
Q ss_pred HHHHHHHhCcEEEecCCCCC------CcHHHHHHHHcCCceEEcC--CCCcccccc
Q 007300 467 LAHMIIAGADFILIPSRFEP------CGLIQLHAMRYGTVPIVAS--TGGLVDTVE 514 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS~~E~------~gl~~lEAma~G~PvI~s~--~gg~~e~i~ 514 (609)
.+.+.++.||+++......+ +.--.++.|.-|..+|-.. .||..|..+
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~ 323 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAE 323 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCC
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccC
Confidence 45568899999987643221 3446888888898887665 688877643
No 271
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=25.13 E-value=1.5e+02 Score=28.70 Aligned_cols=91 Identities=16% Similarity=0.098 Sum_probs=54.3
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
..|+++|-= .=|...+++++.+. ++++++-+-+.. .+..+++..+++... + ....++++..|++++
T Consensus 7 ~~igiIG~G--~~g~~~~~~~l~~~--~~~~l~av~d~~---~~~~~~~a~~~~~~~-----~--~~~~~ll~~~D~V~i 72 (308)
T 3uuw_A 7 IKMGMIGLG--SIAQKAYLPILTKS--ERFEFVGAFTPN---KVKREKICSDYRIMP-----F--DSIESLAKKCDCIFL 72 (308)
T ss_dssp CEEEEECCS--HHHHHHTHHHHTSC--SSSEEEEEECSC---HHHHHHHHHHHTCCB-----C--SCHHHHHTTCSEEEE
T ss_pred CcEEEEecC--HHHHHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCCC-----c--CCHHHHHhcCCEEEE
Confidence 467777752 11222345555444 678888555544 334455555554211 2 223346669999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 481 PSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 481 pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
.+......-.+.+|+..|++|++-.
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EK 97 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDK 97 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECS
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcC
Confidence 8765544555778999999998763
No 272
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=25.01 E-value=78 Score=30.51 Aligned_cols=41 Identities=12% Similarity=0.027 Sum_probs=28.5
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
.+|+|++|++. |++-. ..++.+...++++|++|.|++...+
T Consensus 6 ~~~rvLvv~aH--PDDe~----l~~GGtia~~~~~G~~V~vv~~T~G 46 (270)
T 3dfi_A 6 DRTRILAISPH--LDDAV----LSVGASLAQAEQDGGKVTVFTVFAG 46 (270)
T ss_dssp CCSEEEEEESS--TTHHH----HHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCCEEEEEeC--CchHH----HhhHHHHHHHHhCCCeEEEEEEeCC
Confidence 36899999984 76433 2234455667789999999986543
No 273
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=24.81 E-value=43 Score=32.71 Aligned_cols=32 Identities=34% Similarity=0.424 Sum_probs=23.4
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhC-----C-CeEEEEee
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-----G-HRVMTIAP 126 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-----G-h~V~vit~ 126 (609)
+|||+||+. |.+|. .++..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 489999983 55553 356777777 9 99998864
No 274
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=24.67 E-value=4.3e+02 Score=24.57 Aligned_cols=110 Identities=12% Similarity=0.128 Sum_probs=67.4
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh---CcEEEecCCC-CCCcHHHHHHHHc-----C
Q 007300 428 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMRY-----G 498 (609)
Q Consensus 428 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~---aDv~v~pS~~-E~~gl~~lEAma~-----G 498 (609)
...+++|+-+.+. ....+.......+..+ ...-+...+-..+.. .|++++--.. +.-|+.+++.+.. .
T Consensus 123 ~~~~ILivDD~~~-~~~~l~~~L~~~~~~v--~~a~~~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~ 199 (259)
T 3luf_A 123 QQIEVLVVDDSRT-SRHRTMAQLRKQLLQV--HEASHAREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQ 199 (259)
T ss_dssp TTCEEEEECSCHH-HHHHHHHHHHTTTCEE--EEESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTT
T ss_pred CCCcEEEEeCCHH-HHHHHHHHHHHcCcEE--EEeCCHHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCC
Confidence 5678888877652 3334444433433222 223355555455543 4777775544 4467777777653 4
Q ss_pred CceEEcC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 499 TVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 499 ~PvI~s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+|+|+.. ... ..+.++.|..+|+. -|-+.+++...|.++++.
T Consensus 200 ~~ii~~s~~~~~~~~~~a~~~Ga~~yl~----------KP~~~~~L~~~i~~~l~~ 245 (259)
T 3luf_A 200 LAIIGISVSDKRGLSARYLKQGANDFLN----------QPFEPEELQCRVSHNLEA 245 (259)
T ss_dssp SEEEEEECSSSSSHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCHHHHHHHHhcChhheEc----------CCCCHHHHHHHHHHHHHh
Confidence 6776433 222 22335678899987 899999999999998874
No 275
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.62 E-value=70 Score=29.60 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=24.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCC-CeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G-h~V~vit~~~ 128 (609)
||.++|+-- +||+| ..+++.|+++| ++|.++....
T Consensus 23 mk~vlVtGa------tG~iG---~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGA------GGQIA---RHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETT------TSHHH---HHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeC------CcHHH---HHHHHHHHhCCCceEEEEEcCh
Confidence 555555521 46666 45788899999 9998887653
No 276
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=24.47 E-value=50 Score=33.33 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=30.6
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHH--hCCCeEEEEeecC
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA--ANGHRVMTIAPRY 128 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~--~~Gh~V~vit~~~ 128 (609)
+.++|+|++.. + .-|=.++..+|+.+|+ ++|++|.++....
T Consensus 16 ~~~~i~v~sgK--G---GvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 16 TTHKWIFVGGK--G---GVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SSCCEEEEEES--T---TSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCcEEEEEeCC--C---CCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 35678888763 1 1244557788999999 9999999999764
No 277
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=24.35 E-value=74 Score=29.54 Aligned_cols=36 Identities=17% Similarity=0.043 Sum_probs=26.6
Q ss_pred CceEEEEEeecCCccccch-HHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG-~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++||++-.+ |+ .......|.+.|.+.|++|.|+.+.
T Consensus 4 ~k~IllgvT--------Gaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMT--------GASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEEC--------SSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 457776653 33 3445678999999999999999865
No 278
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.33 E-value=56 Score=29.84 Aligned_cols=25 Identities=12% Similarity=0.199 Sum_probs=19.1
Q ss_pred cchHHHHhhchhHHHH-hCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~-~~Gh~V~vit~~ 127 (609)
+||+| ..+++.|+ +.||+|.+++.+
T Consensus 14 sg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 14 AGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp TSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred CcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 46666 45778888 899999888755
No 279
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=24.33 E-value=2.6e+02 Score=21.94 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=62.4
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH-----cCCceE
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 502 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma-----~G~PvI 502 (609)
+++|+.+.+ ...+.+.......+..+. ..-+.......+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 4 ~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii 80 (127)
T 2jba_A 4 RILVVEDEA-PIREMVCFVLEQNGFQPV--EAEDYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVV 80 (127)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHCCceEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEE
Confidence 566777654 344455554444443332 2223333333332 35888775444 335677777775 356776
Q ss_pred EcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 503 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 503 ~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.-.... ..+.++.|..+++. -|-+.+++...|..++..
T Consensus 81 ~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 122 (127)
T 2jba_A 81 MLTARGEEEDRVRGLETGADDCIT----------KPFSPKELVARIKAVMRR 122 (127)
T ss_dssp EEEETTHHHHHHTTCCCSCSEEEE----------ESCCHHHHHHHHHHHHHC
T ss_pred EEeCCCCHHHHHHHHhcCCCeEEe----------CCCCHHHHHHHHHHHHhc
Confidence 543222 33455667788876 888999999999988764
No 280
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=24.18 E-value=36 Score=34.34 Aligned_cols=44 Identities=14% Similarity=-0.177 Sum_probs=27.2
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|||+++.....+. ..-.-.....++++|.+.||+|.++...
T Consensus 1 m~~~~v~vl~gg~s~E--~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAE--HEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSC--HHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCcc--chhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 5679999998532221 0000122356788999999999988765
No 281
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.12 E-value=44 Score=30.62 Aligned_cols=30 Identities=37% Similarity=0.541 Sum_probs=23.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEe
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit 125 (609)
..|++|..- | .|+. +|..|+++|++|+|+=
T Consensus 3 ~dV~IIGaG--p----aGL~-----aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 3 VPIAIIGTG--I----AGLS-----AAQALTAAGHQVHLFD 32 (336)
T ss_dssp CCEEEECCS--H----HHHH-----HHHHHHHTTCCEEEEC
T ss_pred CCEEEECcC--H----HHHH-----HHHHHHHCCCCEEEEE
Confidence 468888853 4 4666 8889999999999984
No 282
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=24.08 E-value=46 Score=33.73 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=24.9
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.|||.||.. |-+| ..++..|++.||+|.++...
T Consensus 20 m~~mkIgiIGl--------G~mG---~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGL--------GRMG---ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECc--------hHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 55789999973 3333 45788999999999887654
No 283
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.97 E-value=67 Score=30.10 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=28.4
Q ss_pred ceEEEEEeecCCccccc--hHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~G--G~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||+.|++. .| |-.+...+|+.+|+++|++|.++=...
T Consensus 2 ~~vi~v~s~------kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSG------KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECS------STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECC------CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 466666543 34 556778899999999999999887653
No 284
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=23.94 E-value=2.7e+02 Score=22.01 Aligned_cols=110 Identities=16% Similarity=0.058 Sum_probs=63.5
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH---hCcEEEecCCCC--CCcHHHHHHHH---cCCc
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRFE--PCGLIQLHAMR---YGTV 500 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~---~aDv~v~pS~~E--~~gl~~lEAma---~G~P 500 (609)
..+++|+.+.. ...+.+.......+-.+. ..-+...+...+. ..|++++-.... .-|+.+++.+. ..+|
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ 81 (132)
T 2rdm_A 5 AVTILLADDEA-ILLLDFESTLTDAGFLVT--AVSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMP 81 (132)
T ss_dssp SCEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCC
T ss_pred CceEEEEcCcH-HHHHHHHHHHHHcCCEEE--EECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCC
Confidence 45777777654 344455554444443333 2334444444443 468888765543 45676776664 3677
Q ss_pred eEEcCCCCcccccccC--cceeEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007300 501 PIVASTGGLVDTVEEG--FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 551 (609)
Q Consensus 501 vI~s~~gg~~e~i~~~--~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~~ 551 (609)
+|.-....-.+....+ ..+++. .|-+.+++..+|.+++...
T Consensus 82 ii~~s~~~~~~~~~~~~~~~~~l~----------kP~~~~~l~~~i~~~~~~~ 124 (132)
T 2rdm_A 82 IVYISGHAALEWASNGVPDSIILE----------KPFTSAQLITAVSQLLNAR 124 (132)
T ss_dssp EEEEESSCCTTHHHHSCTTCEEEE----------SSCCHHHHHHHHHHHHHTT
T ss_pred EEEEeCCccHHHHHhhcCCcceEe----------CCCCHHHHHHHHHHHHhcC
Confidence 7655433222222221 125765 8899999999999998764
No 285
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=23.88 E-value=3.2e+02 Score=25.22 Aligned_cols=108 Identities=14% Similarity=0.070 Sum_probs=61.1
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc--CCceEE
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY--GTVPIV 503 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~--G~PvI~ 503 (609)
..+++|+.+.+ .....+..+....+..+ ....+...+...+. ..|++++-... +.-|+.+++.+.. .+|||.
T Consensus 37 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~ 113 (249)
T 3q9s_A 37 EQRILVIEDDH-DIANVLRMDLTDAGYVV--DHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIV 113 (249)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEECCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEE
Confidence 34666666543 24444444444443212 22223333333332 35777775544 2345666666653 466655
Q ss_pred cCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 504 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 504 s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
-.... ..+.+..|..||+. -|.+.+++.++|..++.
T Consensus 114 lt~~~~~~~~~~a~~~Ga~~yl~----------Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 114 LTARDTVEEKVRLLGLGADDYLI----------KPFHPDELLARVKVQLR 153 (249)
T ss_dssp EESCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred EECCCCHHHHHHHHHCCCcEEEE----------CCCCHHHHHHHHHHHHh
Confidence 44322 22344567889987 89999999999999886
No 286
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=23.87 E-value=47 Score=31.35 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=24.3
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHh-CCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~-~Gh~V~vit~~ 127 (609)
.+|.++|+.- .||+|. .+++.|++ +|++|.++...
T Consensus 3 ~~k~vlITGa------sggIG~---~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGG------NKGIGL---AIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESSC------SSHHHH---HHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeCC------CcHHHH---HHHHHHHHhcCCeEEEEeCC
Confidence 4566666532 466664 57888999 99999887654
No 287
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=23.84 E-value=62 Score=32.30 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=28.7
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
|++|||++++ ||.| ...+.++|.+.+++++.|.+-.|
T Consensus 2 ~~~~~IV~ig---------GGtG--l~~ll~gLk~~~~~iTaIVtvaD 38 (326)
T 2q7x_A 2 MRXPXITVIG---------GGTG--SPVILXSLREXDVEIAAIVTVAD 38 (326)
T ss_dssp CCCCEEEEEC---------CCTT--HHHHHHHHHHSSCEEEEEECCBS
T ss_pred CCCCeEEEEc---------Cccc--HHHHHHHhccCCCCeEEEEECcc
Confidence 5678999987 5555 45578888889999999987655
No 288
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=23.83 E-value=1.9e+02 Score=29.32 Aligned_cols=81 Identities=25% Similarity=0.204 Sum_probs=46.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC--------hHHHHHHHHhCcEEEe--cCCCC----C---CcHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--------IPLAHMIIAGADFILI--PSRFE----P---CGLIQ 491 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~--------~~~~~~~l~~aDv~v~--pS~~E----~---~gl~~ 491 (609)
+-++-|+|-|. +-..+.+....++-++..+.... ...+.++++.||++++ |..-+ . ++-..
T Consensus 116 g~tvGIIGlG~--IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~ 193 (380)
T 2o4c_A 116 ERTYGVVGAGQ--VGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPR 193 (380)
T ss_dssp GCEEEEECCSH--HHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHH
T ss_pred CCEEEEEeCCH--HHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHH
Confidence 44566666655 44444444444443333322110 1124468999999887 33333 3 34457
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007300 492 LHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 492 lEAma~G~PvI~s~~gg~~e 511 (609)
++.|.-|..+|-+..|++.+
T Consensus 194 l~~mk~gailIN~sRG~vvd 213 (380)
T 2o4c_A 194 LAALRPGTWLVNASRGAVVD 213 (380)
T ss_dssp HHTSCTTEEEEECSCGGGBC
T ss_pred HhhCCCCcEEEECCCCcccC
Confidence 88888898888888887655
No 289
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=23.75 E-value=38 Score=34.17 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=24.3
Q ss_pred Cc-eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GL-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~M-kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.| ||+||+. |.+| ..++..|++.||+|+++...
T Consensus 14 ~M~kI~iIG~--------G~mG---~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 14 YLNKAVVFGS--------GAFG---TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CEEEEEEECC--------SHHH---HHHHHHHTTTEEEEEEECSC
T ss_pred ccCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 46 8999984 4444 33678889999999888654
No 290
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=23.69 E-value=38 Score=35.58 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=21.7
Q ss_pred eEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 86 kIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
||++|..- .+|+. -|..|+++|++|+|+=.
T Consensus 3 ~VvVIGaG------~~GL~-----aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 3 PTTVIGAG------FGGLA-----LAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CEEEECCH------HHHHH-----HHHHHHHTTCCEEEECC
T ss_pred CEEEECCc------HHHHH-----HHHHHHHCCCcEEEEcc
Confidence 58888754 35555 45668999999998853
No 291
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=23.67 E-value=79 Score=30.43 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=25.4
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+++ |+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 13 ~l~g-k~vlVTGa------s~gIG---~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 13 SFAQ-RTVVITGA------NSGLG---AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CCTT-CEEEEECC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCC-CEEEEeCC------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 3445 45555532 47777 46889999999999887654
No 292
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=23.67 E-value=75 Score=31.07 Aligned_cols=41 Identities=24% Similarity=0.329 Sum_probs=31.3
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.++||+.|+..- | .-|-.+...+||..|++.|.+|.+|-..
T Consensus 102 ~~~kvI~vts~k-g---G~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 102 TENNILMITGAT-P---DSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CSCCEEEEEESS-S---SSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCC-C---CCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 457887777541 2 2366678899999999999999998765
No 293
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=23.64 E-value=1.8e+02 Score=29.13 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=43.0
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC--------hHHHHHHHHhCcEEEecC--CCCC---CcHHHHHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--------IPLAHMIIAGADFILIPS--RFEP---CGLIQLHAM 495 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~--------~~~~~~~l~~aDv~v~pS--~~E~---~gl~~lEAm 495 (609)
+-++-|+|-|. +-..+.+.....+-++..+.... ...+.++++.||++++.. .-+. ++-..++.|
T Consensus 171 gktiGIIGlG~--IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~m 248 (340)
T 4dgs_A 171 GKRIGVLGLGQ--IGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQAL 248 (340)
T ss_dssp TCEEEEECCSH--HHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHT
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcC
Confidence 34455566554 44444444444443333322211 123557899999988743 2333 344688888
Q ss_pred HcCCceEEcCCCCccc
Q 007300 496 RYGTVPIVASTGGLVD 511 (609)
Q Consensus 496 a~G~PvI~s~~gg~~e 511 (609)
.-|..+|-+..|++.+
T Consensus 249 k~gailIN~aRG~vvd 264 (340)
T 4dgs_A 249 GPEGIVVNVARGNVVD 264 (340)
T ss_dssp TTTCEEEECSCC----
T ss_pred CCCCEEEECCCCcccC
Confidence 8899889888887654
No 294
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=23.63 E-value=56 Score=31.43 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=24.4
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|...|+++|+-- .||+| ..+++.|+++|++|.++...
T Consensus 21 m~~~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGV------SSGIG---LAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 444577777743 46666 45788999999999777644
No 295
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=23.61 E-value=51 Score=32.51 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=23.6
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|+|++.+. +|++| ..+++.|.++||+|.++...
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGG-------AGYIG---SHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp CSEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEecC
Confidence 467665542 35555 45788899999999988643
No 296
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=23.56 E-value=60 Score=30.00 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=24.5
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
|+-|||++|.. |.+| ..++..|++.||+|.+++.
T Consensus 21 m~mmkI~IIG~--------G~mG---~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGA--------GAIG---SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEEC--------HHHH---HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECC--------CHHH---HHHHHHHHhCCCEEEEEEC
Confidence 44589999983 3333 4578889999999988443
No 297
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=23.54 E-value=68 Score=28.99 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=30.0
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHH-HHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPA-LAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~a-L~~~Gh~V~vit~~ 127 (609)
|||++|... |. +.|-...+...++.. |.+.|++|.++-..
T Consensus 3 mkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 3 YSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp EEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred ceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 799999864 42 345567777778888 88889999888754
No 298
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=23.52 E-value=1.1e+02 Score=30.38 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=30.0
Q ss_pred HHHHHHhCcEEEecCC--CC---CCcHHHHHHHHcCCceEEcCCCCcc
Q 007300 468 AHMIIAGADFILIPSR--FE---PCGLIQLHAMRYGTVPIVASTGGLV 510 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~--~E---~~gl~~lEAma~G~PvI~s~~gg~~ 510 (609)
+.++++.||++++.-. .+ -++-..++.|.-|..+|.+..|+..
T Consensus 209 l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~v 256 (333)
T 3ba1_A 209 VVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHV 256 (333)
T ss_dssp HHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGB
T ss_pred HHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchh
Confidence 4468899999887432 22 2344578888888888888877755
No 299
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=23.51 E-value=3.9e+02 Score=24.63 Aligned_cols=121 Identities=15% Similarity=0.033 Sum_probs=62.4
Q ss_pred CcEEEEEe-ccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec--ChHHHHHHHHhCc
Q 007300 400 IPVIGFIG-RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGAD 476 (609)
Q Consensus 400 ~~~i~~iG-rl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~~~~l~~aD 476 (609)
.|+.+..+ +.....|.+..++.+... .+..+++|+-.....+.+.+...+++.++...... ..+.+..+...+|
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~---Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d 157 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKAS---GVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTT 157 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHH---TCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCS
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHC---CCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCC
Confidence 35554432 222344556666666655 67788888755333444555555555444433332 2344555667788
Q ss_pred -EEEecCCC--C----CCcH---HHHHHHHc--CCceEEcCC----CCcccccccCcceeEec
Q 007300 477 -FILIPSRF--E----PCGL---IQLHAMRY--GTVPIVAST----GGLVDTVEEGFTGFQMG 523 (609)
Q Consensus 477 -v~v~pS~~--E----~~gl---~~lEAma~--G~PvI~s~~----gg~~e~i~~~~~G~l~~ 523 (609)
++.+-+.. . +++- ..++.+.. ++|+++.-- ..+.+++..|..|+++|
T Consensus 158 ~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 158 GFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp SEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred CeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 54332221 1 1222 24444433 788877531 11223446688888875
No 300
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=23.48 E-value=1.3e+02 Score=29.84 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=31.2
Q ss_pred HHHHHHhCcEEEec--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+..+++.||++++. ..-+. ++-..++.|.-|..+|-+..|++.+
T Consensus 192 l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd 240 (331)
T 1xdw_A 192 LDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVD 240 (331)
T ss_dssp HHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccccc
Confidence 44688999998873 32233 3445788888888888888887654
No 301
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=23.40 E-value=2.6e+02 Score=21.67 Aligned_cols=107 Identities=11% Similarity=0.160 Sum_probs=62.6
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc---CCceEEc
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPIVA 504 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI~s 504 (609)
+++|+.+.. .....+.+.....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+|.-
T Consensus 2 ~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 78 (121)
T 2pl1_A 2 RVLVVEDNA-LLRHHLKVQIQDAGHQVD--DAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVL 78 (121)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEE
T ss_pred eEEEEeCcH-HHHHHHHHHHhhcCCEEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 456666543 344455554444443232 2224444433443 35888875444 3457777777653 5666554
Q ss_pred C-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 505 S-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 505 ~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
. ... ..+.++.|..+++. -|-+.+++...|.+++..
T Consensus 79 s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 118 (121)
T 2pl1_A 79 TARESWQDKVEVLSAGADDYVT----------KPFHIEEVMARMQALMRR 118 (121)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHcCccceEE----------CCCCHHHHHHHHHHHHHh
Confidence 3 222 23345567889987 899999999999887753
No 302
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=23.40 E-value=59 Score=29.11 Aligned_cols=33 Identities=27% Similarity=0.547 Sum_probs=22.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||++... .||+| ..+++.|+ +|++|.++...
T Consensus 3 kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 3 AMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp SCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 578655543 36666 45788888 99999887654
No 303
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.36 E-value=60 Score=30.27 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=24.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 3 ~k~vlVTGa------s~GIG---~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGA------GSGLG---RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 466666632 46666 45789999999999877654
No 304
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=23.34 E-value=83 Score=31.07 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=28.4
Q ss_pred CceEEEEEeecCCccccc--hHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 84 GLNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~G--G~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
+|++++|... .| |=.+...+||.+|+++|++|.++....
T Consensus 12 gm~~i~v~sg------KGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 12 GKTTFVFIGG------KGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp TBCEEEEEEE------STTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEEeC------CCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5555555443 34 445677889999999999999999764
No 305
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=23.32 E-value=2.4e+02 Score=27.52 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=30.8
Q ss_pred HHHHHHhCcEEEecCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++... -+. ++-..++.|.-|..+|-+..|++.+
T Consensus 190 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd 238 (307)
T 1wwk_A 190 LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVD 238 (307)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccC
Confidence 4457899999887432 233 3445788888898888888877654
No 306
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=23.30 E-value=44 Score=33.25 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=23.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCC-CeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G-h~V~vit~~ 127 (609)
+++|+|++.+. +|++| ..|++.|.++| |+|.++...
T Consensus 44 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 44 IEGRMIIVTGG-------AGFIG---SNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp ----CEEEETT-------TSHHH---HHHHHHHHHTTCCCEEEEECC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCcEEEEEecC
Confidence 45678776543 35555 45788899999 999888754
No 307
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=23.30 E-value=45 Score=32.30 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=26.9
Q ss_pred CceEEEEEeecCCccccchHHH---HhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGD---VLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~---~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|||+++.....+ .-.. ....+++++.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 5899999743211 1111 2346899999999999998865
No 308
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=23.27 E-value=38 Score=32.86 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=23.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIG---KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCcEEEEECC
Confidence 367766553 35555 34678899999999888754
No 309
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.22 E-value=31 Score=32.70 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=23.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||+++|+-- .||+| ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 1 MSTAIVTNV------KHFGG---MGSALRLSEAGHTVACHDES 34 (254)
T ss_dssp -CEEEESST------TSTTH---HHHHHHHHHTTCEEEECCGG
T ss_pred CeEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777642 46666 35888999999998776543
No 310
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=23.22 E-value=1.2e+02 Score=29.64 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=45.6
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecC--------hHHHHHHHHhCcEEEecC--CCCC---CcHHHHHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN--------IPLAHMIIAGADFILIPS--RFEP---CGLIQLHAM 495 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~--------~~~~~~~l~~aDv~v~pS--~~E~---~gl~~lEAm 495 (609)
+-++-|+|-|. +-..+.+.....+-++..+.... ...+.++++.||++++.. .-+. ++-..++.|
T Consensus 122 g~tvGIIGlG~--IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~m 199 (290)
T 3gvx_A 122 GKALGILGYGG--IGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANA 199 (290)
T ss_dssp TCEEEEECCSH--HHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTC
T ss_pred cchheeeccCc--hhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhh
Confidence 34555666654 33333333333333343332221 124557899999988743 2333 444577788
Q ss_pred HcCCceEEcCCCCccc
Q 007300 496 RYGTVPIVASTGGLVD 511 (609)
Q Consensus 496 a~G~PvI~s~~gg~~e 511 (609)
.-|..+|-+..|+..+
T Consensus 200 k~gailIN~aRG~~vd 215 (290)
T 3gvx_A 200 RKNLTIVNVARADVVS 215 (290)
T ss_dssp CTTCEEEECSCGGGBC
T ss_pred hcCceEEEeehhcccC
Confidence 8888888888777443
No 311
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.15 E-value=76 Score=30.85 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=29.2
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++|||+.|+ . -+ .-|-.+...+|+.+|+++|++|.+|=..
T Consensus 39 ~~~~vI~v~-~-KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVY-G-KG---GIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEE-C-ST---TSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEE-C-CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357777776 3 11 2355567889999999999999998765
No 312
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=23.14 E-value=84 Score=28.03 Aligned_cols=40 Identities=0% Similarity=0.003 Sum_probs=28.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC------CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN------GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~------Gh~V~vit~~ 127 (609)
|||++|... |. +.|-...+...++..+.+. |++|.++-..
T Consensus 1 Mkilii~gS--~r-~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~ 46 (191)
T 1t0i_A 1 MKVGIIMGS--VR-AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQ 46 (191)
T ss_dssp CEEEEEECC--CC-SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHH
T ss_pred CeEEEEeCC--CC-CCCchHHHHHHHHHHHHHhhccCCCCceEEEEehh
Confidence 899999875 42 2344556666677777776 7999988754
No 313
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=23.11 E-value=2.7e+02 Score=21.77 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=62.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHH---cCCceEE
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 503 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 503 (609)
.+++|+.+.+ ...+.+..+....+..+. ..-+.......+ ...|++++-... +.-|+.+++.+. ..+|+|.
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 80 (124)
T 1srr_A 4 EKILIVDDQS-GIRILLNEVFNKEGYQTF--QAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII 80 (124)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEE
Confidence 3566776644 344555555444443232 223444433333 346888876544 335666666664 3677765
Q ss_pred cCC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHH
Q 007300 504 AST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 549 (609)
Q Consensus 504 s~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~ 549 (609)
-.. .. ..+....|..+++. -|-+.+++..+|.+++.
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~ 120 (124)
T 1srr_A 81 MTAYGELDMIQESKELGALTHFA----------KPFDIDEIRDAVKKYLP 120 (124)
T ss_dssp EESSCCHHHHHHHHHHTCCCEEE----------SSCCHHHHHHHHHHHSC
T ss_pred EEccCchHHHHHHHhcChHhhcc----------CCCCHHHHHHHHHHHhc
Confidence 433 22 22344567788876 88999999999988764
No 314
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=23.09 E-value=73 Score=30.69 Aligned_cols=25 Identities=24% Similarity=0.480 Sum_probs=19.1
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++...
T Consensus 35 sggiG---~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 35 GTGLG---KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46666 45788999999999887654
No 315
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=22.99 E-value=2.7e+02 Score=21.70 Aligned_cols=108 Identities=11% Similarity=0.163 Sum_probs=62.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH--cCCceEEc
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVA 504 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma--~G~PvI~s 504 (609)
.+++|+.+.+ ...+.+.......+-.+. ..-+.......+. ..|++++-... +.-|+.+++.+. ..+|+|..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~ 80 (123)
T 1xhf_A 4 PHILIVEDEL-VTRNTLKSIFEAEGYDVF--EATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFL 80 (123)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHhhCCcEEE--EeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 3566776544 344445554444442222 2223444333333 46888876554 335666666654 46777654
Q ss_pred CC-CC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 505 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 505 ~~-gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
.. .. ..+.++.|..+++. -|-+.+++...|..++..
T Consensus 81 s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 120 (123)
T 1xhf_A 81 TGRDNEVDKILGLEIGADDYIT----------KPFNPRELTIRARNLLSR 120 (123)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred ECCCChHHHHHHHhcCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 32 22 22344567889987 899999999999887753
No 316
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=22.98 E-value=3e+02 Score=22.20 Aligned_cols=110 Identities=9% Similarity=0.084 Sum_probs=64.2
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEE-eecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc---CCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~-~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 501 (609)
..+++|+.+.. .....+.++....++ +... ..-+...+...+. ..|++++-... +.-|+.+++.+.. ..|+
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 86 (143)
T 2qv0_A 9 KMKVIIVEDEF-LAQQELSWLINTHSQ-MEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFI 86 (143)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEE
T ss_pred ceEEEEEcCCH-HHHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceE
Confidence 56778887654 244444444443322 2222 2224444433443 36888886554 4467778887754 3444
Q ss_pred E-EcCC-CCcccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 I-VAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I-~s~~-gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
| .+.. ....+.+..|..+++. -|-+.+++..+|.+++..
T Consensus 87 i~~s~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 87 VFITAWKEHAVEAFELEAFDYIL----------KPYQESRIINMLQKLTTA 127 (143)
T ss_dssp EEEESCCTTHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHhCCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 4 3332 2233345567888876 889999999999998875
No 317
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=22.95 E-value=67 Score=30.45 Aligned_cols=25 Identities=20% Similarity=0.411 Sum_probs=18.9
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+|. .+++.|+++|++|.++...
T Consensus 25 sggiG~---~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 25 AGGIGE---TTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCHHHH---HHHHHHHHCCCEEEEEcCC
Confidence 466664 5788999999999887543
No 318
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=22.90 E-value=2.8e+02 Score=27.89 Aligned_cols=85 Identities=9% Similarity=0.050 Sum_probs=55.0
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEee
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.+++.+|-- +...|.|+|-. ...=...++.++.++ ++++.+++... +.+.+.+++.+.+.+..+...
T Consensus 166 Ti~E~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~l---G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~-- 236 (359)
T 2w37_A 166 TVKENFGKL---QGLTLTFMGDG-RNNVANSLLVTGAIL---GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVIT-- 236 (359)
T ss_dssp HHHHHHSCC---TTCEEEEESCT-TSHHHHHHHHHHHHH---TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEE--
T ss_pred HHHHHhCCc---CCeEEEEECCC-ccchHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE--
Confidence 456666622 23689999986 233456777788777 78999999743 234455566666666545443
Q ss_pred cChHHHHHHHHhCcEEEecCC
Q 007300 463 FNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~ 483 (609)
..+.+.+..||++.....
T Consensus 237 ---~d~~eav~~aDvvytd~w 254 (359)
T 2w37_A 237 ---DDLDEGLKGSNVVYTDVW 254 (359)
T ss_dssp ---SCHHHHHTTCSEEEECCS
T ss_pred ---eCHHHHhcCCCEEEEccc
Confidence 223357899999877654
No 319
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=22.87 E-value=56 Score=33.10 Aligned_cols=35 Identities=23% Similarity=0.161 Sum_probs=26.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.++|++|... .+|+. +|..|+++|++|+|+=..
T Consensus 3 ~~~~~V~IVGaG------~aGl~-----~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 3 PTTDRIAVVGGS------ISGLT-----AALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCCSEEEEECCS------HHHHH-----HHHHHHHTTCEEEEECSS
T ss_pred CCCCcEEEECCC------HHHHH-----HHHHHHhCCCCEEEEecC
Confidence 446789999853 25555 788899999999998644
No 320
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.83 E-value=55 Score=32.83 Aligned_cols=25 Identities=32% Similarity=0.323 Sum_probs=19.1
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|++| ..+++.|.++||+|.++...
T Consensus 37 tG~IG---~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 37 TGQDG---SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 35555 45788899999999888754
No 321
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=22.81 E-value=45 Score=30.11 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=24.1
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCC--eEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh--~V~vit~~ 127 (609)
+|||++++. +|++| ..+++.|.++|+ +|.+++..
T Consensus 5 ~~~vlVtGa-------tG~iG---~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAGA-------TGLTG---EHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEECT-------TSHHH---HHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEECC-------CcHHH---HHHHHHHHhCCCCCeEEEEeCC
Confidence 578776553 36655 457888999999 88877654
No 322
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=22.76 E-value=66 Score=31.05 Aligned_cols=38 Identities=29% Similarity=0.404 Sum_probs=27.7
Q ss_pred ceEEEEEeecCCccccch--HHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 85 LNILFVGTEVAPWSKTGG--LGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG--~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
|||+.|+.. .|| -.+...+|+.+|+++|++|.+|=...
T Consensus 4 ~kvI~v~s~------KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNE------KGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456666543 344 45678889999999999998886553
No 323
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=22.67 E-value=5.1e+02 Score=24.76 Aligned_cols=119 Identities=10% Similarity=0.013 Sum_probs=70.6
Q ss_pred CCcEEEEEeccc--cccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec--ChHHHHHHHHh
Q 007300 399 NIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAG 474 (609)
Q Consensus 399 ~~~~i~~iGrl~--~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~~~~l~~ 474 (609)
+.|+++ .+-+. ...|.+.+++.+.+. .+.-+|+.+-+.+....+.+...+++....+...- +.+.+..+.+.
T Consensus 97 ~~Pivl-m~Y~n~v~~~g~~~f~~~~~~a---GvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~ 172 (271)
T 3nav_A 97 ETPIGL-LMYANLVYARGIDDFYQRCQKA---GVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQL 172 (271)
T ss_dssp TSCEEE-EECHHHHHHTCHHHHHHHHHHH---TCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCEEE-EecCcHHHHHhHHHHHHHHHHC---CCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHH
Confidence 446654 35444 466999999988887 67788888876444556667777777555555544 34666677777
Q ss_pred CcEEEec-CCCC------CCcHHHHHHHH-----cCCceEEcCCCCcc--c----ccccCcceeEec
Q 007300 475 ADFILIP-SRFE------PCGLIQLHAMR-----YGTVPIVASTGGLV--D----TVEEGFTGFQMG 523 (609)
Q Consensus 475 aDv~v~p-S~~E------~~gl~~lEAma-----~G~PvI~s~~gg~~--e----~i~~~~~G~l~~ 523 (609)
++-|+.. |... .++..+.|.+. ..+|+++ -+|+. | .+..+..|.++|
T Consensus 173 ~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v--GfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 173 GKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALL--GFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEE--CSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEE--ECCCCCHHHHHHHHHcCCCEEEEC
Confidence 7543433 4421 23333333322 3678777 23332 2 455678888885
No 324
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=22.62 E-value=3e+02 Score=22.00 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=63.9
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHH---cCCceEE
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 503 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 503 (609)
.+++|+.+.+ .....+..+....+-.+. ..-+....-..+. ..|++++-... +.-|+.+++.+. .++|+|.
T Consensus 4 ~~Ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 80 (132)
T 3crn_A 4 KRILIVDDDT-AILDSTKQILEFEGYEVE--IAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIM 80 (132)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEEeCCH-HHHHHHHHHHHHCCceEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEE
Confidence 4567777654 344455554444443332 2234444433333 46888876544 335666776664 3567755
Q ss_pred cC-CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 504 AS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 504 s~-~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
-. ... ..+.+..|..+++. -|-+.+++..+|.+++..
T Consensus 81 ~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 81 VTGYASLENSVFSLNAGADAYIM----------KPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeccccHHHHHHHHhccchhhcc----------CCCCHHHHHHHHHHHHhc
Confidence 43 322 23445568889987 889999999999998764
No 325
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=22.59 E-value=3.2e+02 Score=22.42 Aligned_cols=110 Identities=15% Similarity=0.198 Sum_probs=65.3
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEE-eecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc---CCce
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVP 501 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~-~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 501 (609)
..+++|+.+.. ...+.+..+.....+ +... ...+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~-~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 82 (153)
T 3cz5_A 5 TARIMLVDDHP-IVREGYRRLIERRPG-YAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARI 82 (153)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHTTSTT-EEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCE
T ss_pred ccEEEEECCcH-HHHHHHHHHHhhCCC-cEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeE
Confidence 45677777654 344555555544222 3222 2234444444443 35888876554 3456666666643 6777
Q ss_pred EEcCCCC----cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg----~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|+-.... ..+.+..|..+++. .|-+.+++.++|.+++..
T Consensus 83 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 125 (153)
T 3cz5_A 83 LIFTMHQGSAFALKAFEAGASGYVT----------KSSDPAELVQAIEAILAG 125 (153)
T ss_dssp EEEESCCSHHHHHHHHHTTCSEEEE----------TTSCTTHHHHHHHHHTTT
T ss_pred EEEECCCCHHHHHHHHHCCCcEEEe----------cCCCHHHHHHHHHHHHhC
Confidence 6543322 23344567888887 888999999999998875
No 326
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=22.58 E-value=47 Score=31.44 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=24.4
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
+.|||.||+.. - .| ..|+..|.+.||+|..+..
T Consensus 5 ~~mkI~IIG~G--~---~G------~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDG--S---ST------VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCS--C---CC------SCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeC--H---HH------HHHHHHHHHCCCEEEEecC
Confidence 35899999852 1 12 4589999999999887654
No 327
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=22.56 E-value=75 Score=29.26 Aligned_cols=26 Identities=27% Similarity=0.431 Sum_probs=22.4
Q ss_pred hHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 102 G~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|-.+...+|+.+|+++|++|.++-..
T Consensus 15 GKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 15 GKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 55677889999999999999998765
No 328
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=22.55 E-value=57 Score=32.00 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=18.2
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
+|++| ..+++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 35555 4578889999999988864
No 329
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=22.50 E-value=81 Score=30.69 Aligned_cols=43 Identities=12% Similarity=-0.017 Sum_probs=30.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+..|||++|+.. |. +.|-...++..+++.+.+.|++|.++-..
T Consensus 56 ~~~mKILiI~GS--~R-~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 56 APPVRILLLYGS--LR-ARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CSCCEEEEEESC--CS-SSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCEEEEEEeC--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 346899999875 43 22334455566777888889999988764
No 330
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=22.45 E-value=78 Score=29.79 Aligned_cols=26 Identities=31% Similarity=0.381 Sum_probs=22.3
Q ss_pred hHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 102 G~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|-.+...+|+.+|+++|++|.++-..
T Consensus 15 GKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 15 GKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 55678889999999999999998755
No 331
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=22.44 E-value=63 Score=29.38 Aligned_cols=33 Identities=36% Similarity=0.641 Sum_probs=22.8
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||+++.. .|.+| ..++..|.+.||+|.++...
T Consensus 1 m~i~iiGa-------~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67776641 13334 45788899999999887654
No 332
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=22.35 E-value=67 Score=31.68 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=23.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
...|||++|+. |.+|.. ++..|++.||+|+++ .+
T Consensus 17 ~~~~kI~IiGa--------Ga~G~~---~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 17 FQGMKVAIMGA--------GAVGCY---YGGMLARAGHEVILI-AR 50 (318)
T ss_dssp ---CEEEEESC--------SHHHHH---HHHHHHHTTCEEEEE-CC
T ss_pred ccCCcEEEECc--------CHHHHH---HHHHHHHCCCeEEEE-Ec
Confidence 34689999973 555533 677789999999988 54
No 333
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=22.31 E-value=1.8e+02 Score=29.37 Aligned_cols=44 Identities=27% Similarity=0.396 Sum_probs=32.0
Q ss_pred HHHHHHhCcEEEec--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++. ..-|. ++-..++.|.-|..+|-+..|++.+
T Consensus 224 l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 272 (365)
T 4hy3_A 224 LEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVD 272 (365)
T ss_dssp HHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSC
T ss_pred HHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhC
Confidence 45689999998863 33233 4556888888899899888888654
No 334
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=22.31 E-value=47 Score=30.33 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=28.2
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|... |. .++ +.+...+++++.+.|++|.++-..
T Consensus 2 mkiLiI~gs--p~--~~~-s~l~~~l~~~~~~~g~ev~~~dL~ 39 (192)
T 3f2v_A 2 PKTLIILAH--PN--ISQ-STVHKHWSDAVRQHTDRFTVHELY 39 (192)
T ss_dssp CCEEEEECC--TT--GGG-CSHHHHHHHHHTTCTTTEEEEEHH
T ss_pred CEEEEEEeC--CC--ccH-HHHHHHHHHHHHhCCCeEEEEEch
Confidence 799999874 54 222 357777888888899999988754
No 335
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=22.30 E-value=52 Score=31.39 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=23.5
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++++ + |..=..|+++|.++||+|.+++..
T Consensus 5 ~~~ilVtG----------a-G~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG----------H-GYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET----------C-CHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC----------C-cHHHHHHHHHHHHCCCEEEEEEcC
Confidence 37877654 2 333345788999999999998865
No 336
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=22.30 E-value=3.5e+02 Score=26.94 Aligned_cols=84 Identities=12% Similarity=0.070 Sum_probs=54.5
Q ss_pred HHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEee
Q 007300 387 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 462 (609)
Q Consensus 387 ~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~ 462 (609)
.+++.+|-- +...|.|+|-+ ..=...++.++.++ ++++.++++.. +.+.+.+++.+.+.+..+...
T Consensus 169 TI~E~~G~l---~glkva~vGD~--~nva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~-- 238 (340)
T 4ep1_A 169 TIYEETNTF---KGIKLAYVGDG--NNVCHSLLLASAKV---GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEIL-- 238 (340)
T ss_dssp HHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEE--
T ss_pred HHHHHhCCC---CCCEEEEECCC--chhHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEE--
Confidence 456666632 33689999987 22356678888877 78999999743 344555566666666555432
Q ss_pred cChHHHHHHHHhCcEEEecCC
Q 007300 463 FNIPLAHMIIAGADFILIPSR 483 (609)
Q Consensus 463 ~~~~~~~~~l~~aDv~v~pS~ 483 (609)
.++.+.+..||++.....
T Consensus 239 ---~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 239 ---HNPELAVNEADFIYTDVW 256 (340)
T ss_dssp ---SCHHHHHTTCSEEEECCC
T ss_pred ---CCHHHHhCCCCEEEecCc
Confidence 123357899999877553
No 337
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=22.29 E-value=59 Score=31.72 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=17.9
Q ss_pred HHHhhchhHHHHhCCCeEEEEeec
Q 007300 104 GDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 104 ~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|..-..+++.|.++||+|.++...
T Consensus 11 G~iG~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 11 GYIGSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCC
Confidence 333356788899999999988744
No 338
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=22.23 E-value=2.9e+02 Score=21.73 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=64.3
Q ss_pred eEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH--hCcEEEecCCC-CCCcHHHHHHHHc-----CCce
Q 007300 430 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 501 (609)
Q Consensus 430 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~Pv 501 (609)
.+++|+.+.. ...+.+.++....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~i 80 (127)
T 3i42_A 4 QQALIVEDYQ-AAAETFKELLEMLGFQAD--YVMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKF 80 (127)
T ss_dssp EEEEEECSCH-HHHHHHHHHHHHTTEEEE--EESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEE
T ss_pred ceEEEEcCCH-HHHHHHHHHHHHcCCCEE--EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCE
Confidence 4677777654 345555555555542222 2234444444443 45888876544 4567777777654 4677
Q ss_pred EEcCCCCc---ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 502 IVASTGGL---VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 502 I~s~~gg~---~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
|.-....- .+.+..|..+++. -|-+.+++.+++......
T Consensus 81 i~~s~~~~~~~~~~~~~g~~~~l~----------KP~~~~~L~~~i~~~~~~ 122 (127)
T 3i42_A 81 VAVSGFAKNDLGKEACELFDFYLE----------KPIDIASLEPILQSIEGH 122 (127)
T ss_dssp EEEECC-CTTCCHHHHHHCSEEEE----------SSCCHHHHHHHHHHHC--
T ss_pred EEEECCcchhHHHHHHHhhHHhee----------CCCCHHHHHHHHHHhhcc
Confidence 65432221 3445566788876 899999999999987664
No 339
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=22.21 E-value=3.8e+02 Score=25.51 Aligned_cols=97 Identities=7% Similarity=0.050 Sum_probs=61.1
Q ss_pred ccccccCHHHHHHHHhhcccCCeEEEEEeCCC------------hhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhC
Q 007300 408 RLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 475 (609)
Q Consensus 408 rl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~a 475 (609)
........+..++.++.+.+....++..+.-+ .+-.+.+.++..+.+..+ ....++...+..+...+
T Consensus 29 gpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~-~te~~d~~~~~~l~~~v 107 (262)
T 1zco_A 29 GPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVT-VTEVMDTRHVELVAKYS 107 (262)
T ss_dssp ECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEE-EEECCCGGGHHHHHHHC
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcE-EEeeCCHHhHHHHHhhC
Confidence 33667778899888888877666666666422 233455566666666322 22344555555454558
Q ss_pred cEEEecCCCCCCcHHHHHHH-HcCCceEEcCC
Q 007300 476 DFILIPSRFEPCGLIQLHAM-RYGTVPIVAST 506 (609)
Q Consensus 476 Dv~v~pS~~E~~gl~~lEAm-a~G~PvI~s~~ 506 (609)
|++-++|+. .-...+++++ ..|+||+.+.-
T Consensus 108 d~~kIga~~-~~n~~ll~~~a~~~kPV~lk~G 138 (262)
T 1zco_A 108 DILQIGARN-SQNFELLKEVGKVENPVLLKRG 138 (262)
T ss_dssp SEEEECGGG-TTCHHHHHHHTTSSSCEEEECC
T ss_pred CEEEECccc-ccCHHHHHHHHhcCCcEEEecC
Confidence 999999974 2233344444 47999998874
No 340
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=22.18 E-value=2.1e+02 Score=28.07 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=63.0
Q ss_pred ecCCCCCCCcCCCCccccccccCcchhcccchHHHHHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCe
Q 007300 351 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 430 (609)
Q Consensus 351 I~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~ 430 (609)
|.||-|-+.+.|... ..+--.+++.+|-- +...|.|+|-+....=...++.++.++ +++
T Consensus 121 VINag~g~~~HPtQ~----------------LaDl~Ti~e~~g~l---~glkva~vGD~~~~rva~Sl~~~~~~~--~G~ 179 (306)
T 4ekn_B 121 IINAGDGSNQHPTQT----------------LLDLYTIMREIGRI---DGIKIAFVGDLKYGRTVHSLVYALSLF--ENV 179 (306)
T ss_dssp EEESCSSSSCCHHHH----------------HHHHHHHHHHHSCS---TTCEEEEESCTTTCHHHHHHHHHHHTS--SSC
T ss_pred EEeCCCCCCcCcHHH----------------HHHHHHHHHHhCCc---CCCEEEEEcCCCCCcHHHHHHHHHHhc--CCC
Confidence 557777666766421 11123456666632 336899999765434456677777776 478
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCCC-CCCc
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCG 488 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~-E~~g 488 (609)
++.++++..-.....+.+...+.+..+.... +. .+.++.||++...... |.++
T Consensus 180 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~--d~---~eav~~aDvvy~~~~q~er~~ 233 (306)
T 4ekn_B 180 EMYFVSPKELRLPKDIIEDLKAKNIKFYEKE--SL---DDLDDDIDVLYVTRIQKERFP 233 (306)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHTTCCEEEES--CG---GGCCTTCSEEEECCCCGGGCC
T ss_pred EEEEECCcccccCHHHHHHHHHcCCEEEEEc--CH---HHHhcCCCEEEeCCcccccCC
Confidence 8999997431112233333334454443322 22 2358899988765432 4443
No 341
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=22.14 E-value=87 Score=30.17 Aligned_cols=40 Identities=18% Similarity=0.014 Sum_probs=27.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|... |. ..|=...+...+...|.+.||+|.++-..
T Consensus 3 mkiLiI~gS--pr-~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 3 RRALIVLAH--SE-RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CEEEEEECC--SC-TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CEEEEEEeC--CC-CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 799999874 53 22223445555677788899999998765
No 342
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=22.12 E-value=71 Score=28.60 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=31.1
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHh-CCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~-~Gh~V~vit~~ 127 (609)
|||++|... + +|....+...+++.+.+ .|++|.++...
T Consensus 5 ~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 5 GKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp EEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 689988653 3 68888899999999998 99999888754
No 343
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=22.12 E-value=90 Score=27.24 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=27.5
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+|+-|||++=+.. +|.. +=..+...|.++||+|.=+.+.
T Consensus 4 ~m~~mkI~igsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 4 SMVVKRVFLSSDH-------AGVE-LRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp CCSCSEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCCC
T ss_pred cceeeEEEEEECc-------hhHH-HHHHHHHHHHHCCCEEEEeCCC
Confidence 3545788776653 5655 4556778899999999877654
No 344
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=22.03 E-value=2.8e+02 Score=21.45 Aligned_cols=107 Identities=12% Similarity=0.192 Sum_probs=60.2
Q ss_pred EEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHH--cCCceEEcC
Q 007300 431 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR--YGTVPIVAS 505 (609)
Q Consensus 431 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma--~G~PvI~s~ 505 (609)
+++|+.+.+ .....+.+.....+..+. ...+.......+ ...|++++-... +.-|+.+++.+. ..+|+|.-.
T Consensus 3 ~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s 79 (121)
T 1zh2_A 3 NVLIVEDEQ-AIRRFLRTALEGDGMRVF--EAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLS 79 (121)
T ss_dssp EEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEE
T ss_pred EEEEEeCCH-HHHHHHHHHHhcCCCEEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEE
Confidence 456666544 344455554444442222 222333322222 346888775443 235666777765 346665443
Q ss_pred -CCC---cccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 506 -TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 506 -~gg---~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
... ..+.++.|..+++. .|-+.+++...|..++..
T Consensus 80 ~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 118 (121)
T 1zh2_A 80 ARSEESDKIAALDAGADDYLS----------KPFGIGELQARLRVALRR 118 (121)
T ss_dssp SCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCeEEe----------CCcCHHHHHHHHHHHHHh
Confidence 222 23344567788987 899999999999887753
No 345
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=21.99 E-value=57 Score=30.64 Aligned_cols=25 Identities=32% Similarity=0.415 Sum_probs=19.4
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++...
T Consensus 23 sggiG---~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 23 NRGIG---LAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCc
Confidence 46666 45789999999999888753
No 346
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=21.95 E-value=1.9e+02 Score=28.48 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=56.6
Q ss_pred cEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh--CcEE
Q 007300 401 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFI 478 (609)
Q Consensus 401 ~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDv~ 478 (609)
..++.+|-=. =|....+.++... ++++++-+-+.. .+..++++.+++.. .. | ....++++. .|++
T Consensus 24 irigiIG~G~--ig~~~~~~~~~~~--~~~~lvav~d~~---~~~a~~~a~~~g~~-~~---y--~d~~ell~~~~iDaV 90 (350)
T 4had_A 24 LRFGIISTAK--IGRDNVVPAIQDA--ENCVVTAIASRD---LTRAREMADRFSVP-HA---F--GSYEEMLASDVIDAV 90 (350)
T ss_dssp EEEEEESCCH--HHHHTHHHHHHHC--SSEEEEEEECSS---HHHHHHHHHHHTCS-EE---E--SSHHHHHHCSSCSEE
T ss_pred cEEEEEcChH--HHHHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCC-ee---e--CCHHHHhcCCCCCEE
Confidence 4678887521 1223355666655 688888666654 34556666676631 11 2 123346654 6888
Q ss_pred EecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 479 LIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 479 v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
++.+....-.-..++|+.+|++|+|--
T Consensus 91 ~I~tP~~~H~~~~~~al~aGkhVl~EK 117 (350)
T 4had_A 91 YIPLPTSQHIEWSIKAADAGKHVVCEK 117 (350)
T ss_dssp EECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred EEeCCCchhHHHHHHHHhcCCEEEEeC
Confidence 887765444445788999999998864
No 347
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=21.71 E-value=1.3e+02 Score=24.70 Aligned_cols=10 Identities=30% Similarity=0.371 Sum_probs=6.1
Q ss_pred cEEEEEeccc
Q 007300 401 PVIGFIGRLE 410 (609)
Q Consensus 401 ~~i~~iGrl~ 410 (609)
..|++.|.+.
T Consensus 36 ~~~v~TG~l~ 45 (109)
T 2k6g_A 36 LIFVITGVLE 45 (109)
T ss_dssp CEEEEESBCS
T ss_pred CEEEEeeeCC
Confidence 4566666664
No 348
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=21.66 E-value=87 Score=29.11 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=19.1
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++...
T Consensus 20 sggiG---~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 20 GAGIG---KEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TSHHH---HHHHHHHHTTTCEEEEEESC
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 46666 45789999999999887644
No 349
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=21.65 E-value=2.9e+02 Score=27.72 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=79.5
Q ss_pred CCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh-CcE
Q 007300 399 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-ADF 477 (609)
Q Consensus 399 ~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~-aDv 477 (609)
+.|+.+-.=-.+.-.+.+..++-+..|.+....+|=++-...+-.+.+..+..+.+.-+..-..|+...+-..+.. +|.
T Consensus 29 ~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dk 108 (366)
T 3noy_A 29 DAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHG 108 (366)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSE
T ss_pred CCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCe
Confidence 3454444333456688999999999998888888888877766677788888777655666677888877555544 776
Q ss_pred E-EecCCC---CCCcHHHHHHHHcCCce-EEcCCCCccccc
Q 007300 478 I-LIPSRF---EPCGLIQLHAMRYGTVP-IVASTGGLVDTV 513 (609)
Q Consensus 478 ~-v~pS~~---E~~gl~~lEAma~G~Pv-I~s~~gg~~e~i 513 (609)
+ +.|... +.+.-++-.|-..|+|+ |..+.|.+..-+
T Consensus 109 lRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~l 149 (366)
T 3noy_A 109 IRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDL 149 (366)
T ss_dssp EEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHH
T ss_pred EEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHH
Confidence 4 445443 22345677888999999 556767665533
No 350
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.64 E-value=65 Score=32.65 Aligned_cols=44 Identities=7% Similarity=-0.087 Sum_probs=27.1
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHH-HhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPAL-AANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL-~~~Gh~V~vit~~ 127 (609)
|++|||+++....... .-=.-.....+.++| .+.||+|..+-..
T Consensus 1 m~k~~v~vl~gG~s~E--~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSE--HDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTT--HHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCC--cceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 4579999997532111 000011245688899 9999999988754
No 351
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=21.49 E-value=54 Score=31.57 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=23.1
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCC-CeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G-h~V~vit~~ 127 (609)
.|+|++++. +|++| ..+++.|.++| |+|.+++..
T Consensus 5 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVFGG-------TGAQG---GSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEECC-------CchHH---HHHHHHHHhcCCceEEEEEcC
Confidence 356655442 45555 44678888888 999988865
No 352
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=21.44 E-value=1.3e+02 Score=30.09 Aligned_cols=44 Identities=20% Similarity=0.237 Sum_probs=30.2
Q ss_pred HHHHHHhCcEEEecC--CCCCC---cHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPS--RFEPC---GLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS--~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++.. .-+.. +-..++.|.-|..+|-+..|++.+
T Consensus 213 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd 261 (335)
T 2g76_A 213 LEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVD 261 (335)
T ss_dssp HHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBC
T ss_pred HHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccC
Confidence 446899999988743 32333 345777788888788888777655
No 353
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=21.44 E-value=2.8e+02 Score=27.17 Aligned_cols=44 Identities=14% Similarity=0.163 Sum_probs=30.7
Q ss_pred HHHHHHhCcEEEecCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++... -+. ++-..++.|.-|..+|-+..|++.+
T Consensus 190 l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 190 LEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp HHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBC
T ss_pred HHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccC
Confidence 3457899999887533 222 3445778888888888888877655
No 354
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=21.38 E-value=71 Score=31.94 Aligned_cols=37 Identities=27% Similarity=0.402 Sum_probs=28.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecCC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~~ 129 (609)
|++|||++++ ||.| ...+.++|.+.++++++|.+-.|
T Consensus 2 ~~~~kIv~lg---------GGtG--l~~ll~gLk~~~~~iTaIVtv~D 38 (332)
T 2ppv_A 2 MKQMNVVLIG---------GGTG--LSVLARGLREFPIDITAIVTVAD 38 (332)
T ss_dssp -CCEEEEEEE---------CHHH--HHHHHHHHTTSSEEEEEEECCCC
T ss_pred CCCCeEEEEc---------Cccc--HHHHHHHHHhCCCCeEEEEECCc
Confidence 4578999987 6666 56688888888999999987755
No 355
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=21.32 E-value=78 Score=33.00 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=25.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.+++||++|+. ||.|.. .++.|.++||+|++.=.
T Consensus 7 ~~~k~v~viG~--------G~sG~s---~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGL--------ARSGEA---AARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECC--------TTTHHH---HHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEee--------CHHHHH---HHHHHHhCCCEEEEEeC
Confidence 34678999983 555543 48999999999988754
No 356
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=21.31 E-value=53 Score=31.81 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=17.6
Q ss_pred chHHHHhhchhHHHHhCCCeEEEEee
Q 007300 101 GGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 101 GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
|++| ..+++.|.++||+|.++..
T Consensus 10 G~iG---~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 10 GFIG---SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp SHHH---HHHHHHHHTTTCEEEEECC
T ss_pred cHHH---HHHHHHHHHCCCEEEEEEC
Confidence 5555 4578889999999988754
No 357
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=21.29 E-value=1.5e+02 Score=29.77 Aligned_cols=45 Identities=24% Similarity=0.336 Sum_probs=32.9
Q ss_pred HHHHHHHhCcEEEecC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 467 LAHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
.+.++++.||++++.. .-|. ++-..+..|--|..+|-+..|++.+
T Consensus 220 ~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 269 (345)
T 4g2n_A 220 TLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLIN 269 (345)
T ss_dssp SHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred CHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhC
Confidence 3556899999987743 2233 4556888888899889888888665
No 358
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=21.26 E-value=2.3e+02 Score=26.36 Aligned_cols=119 Identities=12% Similarity=0.110 Sum_probs=60.7
Q ss_pred HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEE-eecChHHHHHHHHhCcEEEecCCCCCCcHHHHHH
Q 007300 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 494 (609)
Q Consensus 416 ~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~-~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEA 494 (609)
+...+.+..|.+.+.+++++-.. ....++++..... +... ..|..+ .+..+|+++...-.+.....+.++
T Consensus 41 ~va~~ka~~Ll~~GA~VtVvap~---~~~~l~~l~~~~~--i~~i~~~~~~~----dL~~adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 41 TIATRRIKGFLQEGAAITVVAPT---VSAEINEWEAKGQ--LRVKRKKVGEE----DLLNVFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp HHHHHHHHHHGGGCCCEEEECSS---CCHHHHHHHHTTS--CEEECSCCCGG----GSSSCSEEEECCCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCC---CCHHHHHHHHcCC--cEEEECCCCHh----HhCCCCEEEECCCCHHHHHHHHHH
Confidence 45556666666656666666543 2344566655432 3322 234433 467899888776554444445554
Q ss_pred HHcCCceEEcCCCCcccccccCc---ceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 495 MRYGTVPIVASTGGLVDTVEEGF---TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 495 ma~G~PvI~s~~gg~~e~i~~~~---~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
...|+||-+.+.....+++-... .++.++ +-..+..-.+++.|++-++.
T Consensus 112 ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~ia-------IST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 112 IKNDQLVNMASSFSDGNIQIPAQFSRGRLSLA-------ISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp SCTTCEEEC-----CCSEECCEEEEETTEEEE-------EECTTSCHHHHHHHHHHHHH
T ss_pred HhCCCEEEEeCCcccCeEEEeeEEEeCCEEEE-------EECCCCCcHHHHHHHHHHHH
Confidence 45899998888766555443210 112220 00223445677777766653
No 359
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=21.26 E-value=30 Score=28.78 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=45.5
Q ss_pred CCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 428 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 428 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
.+..|+|.|.-.. -++.++++...++.++..- +-...|++|.....|.-|-.+-.|...|+|||.-+
T Consensus 12 ~G~~~ViTG~l~~-~R~e~k~~ie~~Ggkv~~s----------VskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~ 78 (113)
T 2cok_A 12 SNMKILTLGKLSR-NKDEVKAMIEKLGGKLTGT----------ANKASLCISTKKEVEKMNKKMEEVKEANIRVVSED 78 (113)
T ss_dssp SSCEEEECSCCSS-CHHHHHHHHHHTTCEEESC----------STTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTH
T ss_pred CCCEEEEEecCCC-CHHHHHHHHHHCCCEEcCc----------cccCccEEEECCCCCCCChHHHHHHHCCCcEEeHH
Confidence 3677888887643 5677778888887665432 22455666655222446788999999999988665
No 360
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=21.25 E-value=58 Score=32.74 Aligned_cols=35 Identities=26% Similarity=0.192 Sum_probs=25.4
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.++|++|... .+|+. +|..|+++|++|.|+=..
T Consensus 9 m~~~dVvIVGaG------~aGl~-----~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 9 GKTRRAEVAGGG------FAGLT-----AAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp --CCEEEEECCS------HHHHH-----HHHHHHHTTCEEEEECSS
T ss_pred CCCCeEEEECCC------HHHHH-----HHHHHHHCCCCEEEEecC
Confidence 456899999853 24555 788899999999998643
No 361
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=21.24 E-value=5.3e+02 Score=25.17 Aligned_cols=133 Identities=11% Similarity=0.083 Sum_probs=77.1
Q ss_pred HhhcCCEEEe--eCHHHHHHHhcccCCCccchhhhccCCeeEecCCCCCCCcCCCCccccccccCcchhcccchHHHHHH
Q 007300 311 GILESDMVLT--VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 388 (609)
Q Consensus 311 ~~~~ad~vi~--vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~nGvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (609)
.-..+|.|+. ..+...+++.+. - .+. |.||.| ....|... ..+--.+
T Consensus 88 ls~~~D~iviR~~~~~~~~~lA~~--~-----------~vP-VINag~-~~~HPtQa----------------LaDl~Ti 136 (307)
T 3tpf_A 88 IGAMVDFVMMRVNKHETLLEFARY--S-----------KAP-VINALS-ELYHPTQV----------------LGDLFTI 136 (307)
T ss_dssp HHHHSSEEEEECSCHHHHHHHHHH--C-----------SSC-EEEEEC-SSCCHHHH----------------HHHHHHH
T ss_pred HHHhCCEEEEecCChHHHHHHHHh--C-----------CCC-EEeCCC-CCcCcHHH----------------HHHHHHH
Confidence 3445898777 455666666641 1 333 446666 46666421 1112345
Q ss_pred HHHhCCCCCCC-CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC----hhhHHHHHHHHHhCCCceEEEeec
Q 007300 389 QAEVGLPVDRN-IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKF 463 (609)
Q Consensus 389 ~~~~gl~~~~~-~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~ 463 (609)
++.+|-- + ...|.|+|-. ..=...++.++.++ ++++.++++.. +.+.+..++.+.+.+..+... .
T Consensus 137 ~e~~g~l---~~gl~va~vGD~--~~va~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~--~ 206 (307)
T 3tpf_A 137 KEWNKMQ---NGIAKVAFIGDS--NNMCNSWLITAAIL---GFEISIAMPKNYKISPEIWEFAMKQALISGAKISLG--Y 206 (307)
T ss_dssp HHTTCCG---GGCCEEEEESCS--SHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEE--S
T ss_pred HHHhCCC---CCCCEEEEEcCC--CccHHHHHHHHHHc---CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEE--c
Confidence 6666632 2 3689999973 22356677777777 78999999743 234445555555655444332 2
Q ss_pred ChHHHHHHHHhCcEEEecCCCCCCc
Q 007300 464 NIPLAHMIIAGADFILIPSRFEPCG 488 (609)
Q Consensus 464 ~~~~~~~~l~~aDv~v~pS~~E~~g 488 (609)
+ +.+.++.||++.... |..+|
T Consensus 207 d---~~eav~~aDvvyt~~-w~smg 227 (307)
T 3tpf_A 207 D---KFEALKDKDVVITDT-WVSMG 227 (307)
T ss_dssp C---HHHHHTTCSEEEECC-SSCTT
T ss_pred C---HHHHhcCCCEEEecC-cccCC
Confidence 2 334789999987754 44444
No 362
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=21.17 E-value=80 Score=29.04 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=23.7
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++|+. |.+|. .++..|.+.||+|.++...
T Consensus 28 ~~~I~iiG~--------G~~G~---~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGS--------GDFAR---SLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEcc--------CHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 589999872 44443 4678889999999887654
No 363
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=21.16 E-value=1.8e+02 Score=28.59 Aligned_cols=44 Identities=25% Similarity=0.411 Sum_probs=29.6
Q ss_pred HHHHHHhCcEEEecCCC--CC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPSRF--EP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS~~--E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+.++++.||++++.... +. ++-..++.|.-|..+|-+..|++.+
T Consensus 187 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd 235 (311)
T 2cuk_A 187 LEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVD 235 (311)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccC
Confidence 45689999998875322 22 3334677777788788888777655
No 364
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=21.16 E-value=63 Score=29.93 Aligned_cols=40 Identities=18% Similarity=0.038 Sum_probs=26.3
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHh-CCCeEEEEeecC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRY 128 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~-~Gh~V~vit~~~ 128 (609)
+.++||++..+. |.......+|.+.|.+ .|++|.|+....
T Consensus 17 l~~k~IllgvTG-------siaa~k~~~lv~~L~~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 17 ERKFHVLVGVTG-------SVAALKLPLLVSKLLDIPGLEVAVVTTER 57 (206)
T ss_dssp CSSEEEEEEECS-------SGGGGTHHHHHHHHC---CEEEEEEECTG
T ss_pred cCCCEEEEEEeC-------hHHHHHHHHHHHHHhcccCCEEEEEECHh
Confidence 456788877742 2223345678899998 899999998763
No 365
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=21.12 E-value=3.7e+02 Score=25.16 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=47.9
Q ss_pred HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec-ChHHHH-HHHHhCcEEEecCCCCCCcHHHHH
Q 007300 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLIQLH 493 (609)
Q Consensus 416 ~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~~l~~aDv~v~pS~~E~~gl~~lE 493 (609)
+..++.++.+.+..++.+=+--..+.-.+.++++..++++-+.+.+.. +.+++. .+-++||+++.|... .-++-.
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~~---~~vi~~ 122 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPGFN---PNTVRA 122 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSSCC---HHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCCCC---HHHHHH
Confidence 345555555555466655554333345677777777777655665554 444443 467889999988642 112222
Q ss_pred HHHcCCceEE
Q 007300 494 AMRYGTVPIV 503 (609)
Q Consensus 494 Ama~G~PvI~ 503 (609)
+-.+|+|++.
T Consensus 123 ~~~~gi~~ip 132 (232)
T 4e38_A 123 CQEIGIDIVP 132 (232)
T ss_dssp HHHHTCEEEC
T ss_pred HHHcCCCEEc
Confidence 4445666543
No 366
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.08 E-value=58 Score=31.49 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=24.2
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 7 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG-------AGFIG---GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC-------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 467765543 35555 45788899999999988754
No 367
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=21.04 E-value=85 Score=31.34 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=22.9
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|||+|++. | .+...+.++|.+.||+|..+...
T Consensus 20 ~~~mrIvf~G~---~--------~fa~~~L~~L~~~~~~i~~Vvt~ 54 (329)
T 2bw0_A 20 FQSMKIAVIGQ---S--------LFGQEVYCHLRKEGHEVVGVFTV 54 (329)
T ss_dssp -CCCEEEEECC---H--------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEEcC---c--------HHHHHHHHHHHHCCCeEEEEEeC
Confidence 55699999952 1 23334567788889998766553
No 368
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=20.97 E-value=78 Score=29.67 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=29.7
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC-CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh~V~vit~~ 127 (609)
|||++|... |. +.|-...+...++..|.+. |++|.++-..
T Consensus 2 mkIliI~gS--~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 2 NKIFIYAGV--RN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CEEEEEECC--CC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CeEEEEECC--CC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 699999864 53 2355666777788888887 9999888654
No 369
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=20.96 E-value=2e+02 Score=28.41 Aligned_cols=45 Identities=18% Similarity=0.125 Sum_probs=32.3
Q ss_pred HHHHHHHhCcEEEecC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 467 LAHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 467 ~~~~~l~~aDv~v~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
.+.++++.||++++.. .-+. ++-..++.|.-|..+|-+..|+..+
T Consensus 184 ~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 233 (324)
T 3evt_A 184 ATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVD 233 (324)
T ss_dssp GCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBC
T ss_pred CHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhh
Confidence 3456899999987743 3233 4556788888898888888887654
No 370
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=20.92 E-value=64 Score=27.49 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=28.4
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEe
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit 125 (609)
|||+++-. +.+|....+...++..|.+.|++|.++.
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 46666532 3379999999999999999999998764
No 371
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=20.92 E-value=55 Score=30.95 Aligned_cols=35 Identities=20% Similarity=0.430 Sum_probs=24.7
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCC----CeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G----h~V~vit~~ 127 (609)
|+.|||.||.. |.+|. .++..|.+.| |+|.++...
T Consensus 2 m~~m~i~iiG~--------G~mG~---~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGL--------GQMGS---ALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECC--------SHHHH---HHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECc--------CHHHH---HHHHHHHHCCCCCCCeEEEEeCC
Confidence 45689999973 44443 3677888889 899877544
No 372
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=20.85 E-value=84 Score=28.10 Aligned_cols=41 Identities=5% Similarity=-0.006 Sum_probs=28.9
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCC--CeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G--h~V~vit~~ 127 (609)
|||++|... |....|-...+...++..+.+.| ++|.++-..
T Consensus 2 mkilii~~S--~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKSS--ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEECC--SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEeC--CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 799999864 53112555666677888888876 999888765
No 373
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.81 E-value=77 Score=30.16 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=19.2
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.||+| ..+++.|+++|++|.++...
T Consensus 40 sggIG---~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 40 GHGIG---RLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 46666 45888999999999887644
No 374
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=20.81 E-value=67 Score=31.54 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=23.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
.+.|+|++.+. +|++| ..+++.|.++||+|.++...
T Consensus 19 ~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 19 SHMKKVFITGI-------CGQIG---SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEeCC-------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 33466665442 35555 45788899999999988754
No 375
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=20.76 E-value=43 Score=31.91 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=24.6
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
||.++|+-- +||+|. .+++.|+++||+|.++...
T Consensus 3 ~k~vlVTGa------sg~IG~---~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVTGA------AGQLGR---VMRERLAPMAEILRLADLS 36 (267)
T ss_dssp EEEEEEEST------TSHHHH---HHHHHTGGGEEEEEEEESS
T ss_pred CCEEEEECC------CCHHHH---HHHHHHHhcCCEEEEEecC
Confidence 566666632 477774 4788899999999877754
No 376
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=20.70 E-value=3.8e+02 Score=22.50 Aligned_cols=112 Identities=16% Similarity=0.191 Sum_probs=64.9
Q ss_pred cCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEe-ecChHHHHHHH--HhCcEEEecCCC-CCCcHHHHHHHHc--CCc
Q 007300 427 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA-KFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY--GTV 500 (609)
Q Consensus 427 ~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~-~~~~~~~~~~l--~~aDv~v~pS~~-E~~gl~~lEAma~--G~P 500 (609)
....+++|+.+.. .....+..+....+. ..... .-+...+...+ ...|++++-... +.-|+.+++.+.. .+|
T Consensus 23 ~~~~~ILivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ 100 (164)
T 3t8y_A 23 DRVIRVLVVDDSA-FMRMVLKDIIDSQPD-MKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTR 100 (164)
T ss_dssp -CCEEEEEECSCH-HHHHHHHHHHHTSTT-EEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSCCE
T ss_pred cCccEEEEEcCCH-HHHHHHHHHHhcCCC-eEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCCce
Confidence 3457888888764 355566666555543 22221 22444443333 357888887654 4457777766543 355
Q ss_pred eEEcCC-CC-----cccccccCcceeEecccccccccCCCCC---------HHHHHHHHHHHHHh
Q 007300 501 PIVAST-GG-----LVDTVEEGFTGFQMGSFSVDCEAVDPVD---------VAAVSTTVRRALAT 550 (609)
Q Consensus 501 vI~s~~-gg-----~~e~i~~~~~G~l~~~~~~~~~~v~~~d---------~~~la~~I~~ll~~ 550 (609)
+|.-.. .. ..+.+..|..+|+. -|-+ .+++.++|.+++..
T Consensus 101 ii~~s~~~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~r~~~~~l~~~i~~~~~~ 155 (164)
T 3t8y_A 101 VIMVSSLTEEGAAITIEALRNGAVDFIT----------KPHGSISLTFRQVAPELLEKIRQAMNV 155 (164)
T ss_dssp EEEEESSCCTTCHHHHHHHHTTCCEEEE----------CSSSSSCGGGGGGHHHHHHHHHHHTTS
T ss_pred EEEEecCCccchHHHHHHHHcCcCEEEe----------CCCCHHHHHHHhhhHHHHHHHHHHhCC
Confidence 544332 22 22456678889987 6666 67888888877764
No 377
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=20.69 E-value=40 Score=33.68 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=24.8
Q ss_pred cCCCceEEEEEeecCCccccchHHHHhhchhHHHHhCC-------CeEEEEeec
Q 007300 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-------HRVMTIAPR 127 (609)
Q Consensus 81 ~~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~G-------h~V~vit~~ 127 (609)
.|..|||++|.. |.+|. .++..|++.| |+|+++...
T Consensus 5 ~m~~mkI~iIG~--------G~mG~---~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 5 SMASKKVCIVGS--------GNWGS---AIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp --CCEEEEEECC--------SHHHH---HHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred ccCCCeEEEECC--------CHHHH---HHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 356789999984 44443 3677788888 999888754
No 378
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.59 E-value=5.6e+02 Score=24.41 Aligned_cols=119 Identities=13% Similarity=0.126 Sum_probs=70.2
Q ss_pred CCcEEEEEecccc--ccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec--ChHHHHHHHHh
Q 007300 399 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAG 474 (609)
Q Consensus 399 ~~~~i~~iGrl~~--~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~~~~l~~ 474 (609)
+.|+++ .+-+.+ +.|++.+++.+.+. .+.-+|+.+-+.+....+.+...+++....+...- +.+.+..+.+.
T Consensus 95 ~~Pivl-m~Y~npv~~~g~e~f~~~~~~a---Gvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~ 170 (267)
T 3vnd_A 95 DMPIGL-LLYANLVFANGIDEFYTKAQAA---GVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQ 170 (267)
T ss_dssp TCCEEE-EECHHHHHHHCHHHHHHHHHHH---TCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHH
T ss_pred CCCEEE-EecCcHHHHhhHHHHHHHHHHc---CCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHh
Confidence 346554 454443 56899999988887 77788888876444455666666777555544443 34667778888
Q ss_pred Cc-EEEecCCCCCCcHH---------HHHHHH--cCCceEEcCCCCcc--c----ccccCcceeEec
Q 007300 475 AD-FILIPSRFEPCGLI---------QLHAMR--YGTVPIVASTGGLV--D----TVEEGFTGFQMG 523 (609)
Q Consensus 475 aD-v~v~pS~~E~~gl~---------~lEAma--~G~PvI~s~~gg~~--e----~i~~~~~G~l~~ 523 (609)
++ ++...|..-..|.. .++... ..+|+++ -+|+. + .+..+..|+++|
T Consensus 171 ~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v--GfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 171 GEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL--GFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp CCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE--CSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE--ECCcCCHHHHHHHHHcCCCEEEEC
Confidence 86 44444554333321 222221 3677766 33442 3 445678899885
No 379
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=20.58 E-value=1.4e+02 Score=30.22 Aligned_cols=79 Identities=13% Similarity=0.061 Sum_probs=50.9
Q ss_pred HHHHhCcEEEec--CCCCCCc-HHHHHHHHcCCceEEcCCCCcccccccCcceeEecccccccccCCCCCHHHHHHHHHH
Q 007300 470 MIIAGADFILIP--SRFEPCG-LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 546 (609)
Q Consensus 470 ~~l~~aDv~v~p--S~~E~~g-l~~lEAma~G~PvI~s~~gg~~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ 546 (609)
.+++..-+.+.- |..+.+= =++.+|+.+|+.+|+-...-..+++.. ..|+. +-+-.++++||+-|+.
T Consensus 227 ~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~Pp--~SfI~--------~~dF~s~~~La~yL~~ 296 (371)
T 2nzw_A 227 EFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP--KSFVN--------VHDFKNFDEAIDYIKY 296 (371)
T ss_dssp HHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCG--GGSEE--------GGGSSSHHHHHHHHHH
T ss_pred HHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCCC--CceEE--------cccCCCHHHHHHHHHH
Confidence 356666665543 2222322 257899999998887765555555543 34432 2266789999999999
Q ss_pred HHHhhCHHHHHHHH
Q 007300 547 ALATYGTQALAEMM 560 (609)
Q Consensus 547 ll~~~~~~~~~~~~ 560 (609)
+-++ +.++.+.-
T Consensus 297 L~~n--~~~Y~~y~ 308 (371)
T 2nzw_A 297 LHTH--KNAYLDML 308 (371)
T ss_dssp HHTC--HHHHHHHH
T ss_pred HhcC--HHHHHHHH
Confidence 9887 66666554
No 380
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.57 E-value=4.4e+02 Score=23.27 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=60.9
Q ss_pred CeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHH---------------hCcEEEecCCC-CCCcHHHH
Q 007300 429 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------------GADFILIPSRF-EPCGLIQL 492 (609)
Q Consensus 429 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~---------------~aDv~v~pS~~-E~~gl~~l 492 (609)
+.+++|+.+.. .....+.++....+-. ....--+...+-.++. ..|++++-... +.-|+.++
T Consensus 61 ~~~ILiVdDd~-~~~~~l~~~L~~~g~~-~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~ 138 (206)
T 3mm4_A 61 GKRVLVVDDNF-ISRKVATGKLKKMGVS-EVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEAT 138 (206)
T ss_dssp TCEEEEECSCH-HHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHH
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHcCCC-eeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHH
Confidence 45677776643 3444555555554421 1122224444433443 46888886554 44577777
Q ss_pred HHHH-------cCCceEEcCCCC-c----ccccccCcceeEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007300 493 HAMR-------YGTVPIVASTGG-L----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 550 (609)
Q Consensus 493 EAma-------~G~PvI~s~~gg-~----~e~i~~~~~G~l~~~~~~~~~~v~~~d~~~la~~I~~ll~~ 550 (609)
+.+. ..+|+|.-.... - .+.+..|..+|+. -|-+ +|.++|.+++..
T Consensus 139 ~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~----------KP~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 139 REIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLD----------KSLN--QLANVIREIESK 196 (206)
T ss_dssp HHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEE----------TTCT--THHHHHHHHC--
T ss_pred HHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEc----------CcHH--HHHHHHHHHHhh
Confidence 7765 457776554322 2 2344567888886 5666 899999888865
No 381
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=20.56 E-value=70 Score=29.03 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=24.7
Q ss_pred ceEEEEEeecCCccccchH-HHHhhchhHHHHhCCCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~-~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|||++|... |. .++. ..+...+.+.+ +.|++|.++-..
T Consensus 1 MkiLiI~gs--pr--~~s~t~~l~~~~~~~~-~~g~~v~~~dL~ 39 (196)
T 3lcm_A 1 MKILIVYTH--PN--PTSFNAEILKQVQTNL-SKEHTVSTLDLY 39 (196)
T ss_dssp CEEEEEECC--SC--TTSHHHHHHHHHHHHS-CTTSEEEEEETT
T ss_pred CEEEEEEeC--CC--CCChHHHHHHHHHHHh-cCCCeEEEEEcc
Confidence 899999875 53 3332 33334444445 679999988765
No 382
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.54 E-value=72 Score=31.10 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=24.7
Q ss_pred CCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 83 ~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+.|||.||.. |-+| ..++..|++.||+|+++...
T Consensus 6 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEECC
Confidence 3589999973 3333 34788899999999888644
No 383
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=20.54 E-value=79 Score=29.80 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=18.4
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEee
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~ 126 (609)
.||+| ..+++.|+++|++|.++..
T Consensus 30 sggiG---~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 30 GRGIG---RGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcC
Confidence 35655 4578889999999988765
No 384
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=20.50 E-value=76 Score=31.53 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=22.8
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|++|||+|+++ |. +.....++|.+.||+|..+...
T Consensus 5 ~~~mrivf~Gt---~~--------fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGT---PD--------FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECC---SH--------HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEec---CH--------HHHHHHHHHHHCCCcEEEEEcC
Confidence 45799999985 21 2223457788889998766654
No 385
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=20.49 E-value=67 Score=32.32 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=23.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHH-hCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~-~~Gh~V~vit~~ 127 (609)
+|+|++... +|++| ..+++.|. ++||+|.++...
T Consensus 2 ~m~vlVTGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 36 (397)
T 1gy8_A 2 HMRVLVCGG-------AGYIG---SHFVRALLRDTNHSVVIVDSL 36 (397)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHHCCCEEEEEECC
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHhCCCEEEEEecC
Confidence 477765442 35555 45788898 999999888644
No 386
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.49 E-value=3.4e+02 Score=26.92 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=56.5
Q ss_pred CcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHh--CcE
Q 007300 400 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADF 477 (609)
Q Consensus 400 ~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~--aDv 477 (609)
+..|+.+|-- .-+...++.++. .++++++-+-+.. .+..++++.+++. ... | ....++++. .|+
T Consensus 26 ~irvgiiG~G--~~~~~~~~~~~~---~~~~~lvav~d~~---~~~a~~~a~~~~~-~~~---~--~~~~~ll~~~~vD~ 91 (361)
T 3u3x_A 26 ELRFAAVGLN--HNHIYGQVNCLL---RAGARLAGFHEKD---DALAAEFSAVYAD-ARR---I--ATAEEILEDENIGL 91 (361)
T ss_dssp CCEEEEECCC--STTHHHHHHHHH---HTTCEEEEEECSC---HHHHHHHHHHSSS-CCE---E--SCHHHHHTCTTCCE
T ss_pred CcEEEEECcC--HHHHHHHHHHhh---cCCcEEEEEEcCC---HHHHHHHHHHcCC-Ccc---c--CCHHHHhcCCCCCE
Confidence 3578888842 234444555554 2688888776654 3455666667652 111 1 223346664 799
Q ss_pred EEecCCCCCCcHHHHHHHHcCCceEEcC
Q 007300 478 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 505 (609)
Q Consensus 478 ~v~pS~~E~~gl~~lEAma~G~PvI~s~ 505 (609)
+++.+....-.-.+.+|+..|++|++-.
T Consensus 92 V~I~tp~~~H~~~~~~al~aGkhVl~EK 119 (361)
T 3u3x_A 92 IVSAAVSSERAELAIRAMQHGKDVLVDK 119 (361)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred EEEeCChHHHHHHHHHHHHCCCeEEEeC
Confidence 8887754333445778999999999864
No 387
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=20.49 E-value=6.7e+02 Score=25.32 Aligned_cols=101 Identities=16% Similarity=0.030 Sum_probs=65.1
Q ss_pred EEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCC------------hhhHHHHHHHHHhCCCceEEEeecChHHHHH
Q 007300 403 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHM 470 (609)
Q Consensus 403 i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 470 (609)
++.+|-..-. ..+..++.+..+.+..+.++..|.-+ .+..+.+.+...+.+. ......++...+..
T Consensus 144 ~~Iigpcsve-s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl-~~~te~~d~~~~~~ 221 (385)
T 3nvt_A 144 VFVFGPCSVE-SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGL-GVISEIVTPADIEV 221 (385)
T ss_dssp EEEEECSBCC-CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTC-EEEEECCSGGGHHH
T ss_pred EEEEEeCCcC-CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCC-EEEEecCCHHHHHH
Confidence 4556654433 78888888888877677777766511 1234566666666663 22334456666665
Q ss_pred HHHhCcEEEecCCC-CCCcHHHHH-HHHcCCceEEcCCC
Q 007300 471 IIAGADFILIPSRF-EPCGLIQLH-AMRYGTVPIVASTG 507 (609)
Q Consensus 471 ~l~~aDv~v~pS~~-E~~gl~~lE-Ama~G~PvI~s~~g 507 (609)
+...+|++=++|+. ..+ .+++ +...|+||+.+..-
T Consensus 222 l~~~vd~lkIgs~~~~n~--~LL~~~a~~gkPVilk~G~ 258 (385)
T 3nvt_A 222 ALDYVDVIQIGARNMQNF--ELLKAAGRVDKPILLKRGL 258 (385)
T ss_dssp HTTTCSEEEECGGGTTCH--HHHHHHHTSSSCEEEECCT
T ss_pred HHhhCCEEEECcccccCH--HHHHHHHccCCcEEEecCC
Confidence 66669999999974 454 3443 55689999988743
No 388
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=20.48 E-value=86 Score=29.08 Aligned_cols=37 Identities=14% Similarity=0.234 Sum_probs=26.5
Q ss_pred CCCceEEEEEeecCCccccchH-HHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~-~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
++++||++... ||. ......|.+.|.+.| +|.|+...
T Consensus 17 l~~k~IllgvT--------Gsiaa~k~~~ll~~L~~~g-~V~vv~T~ 54 (209)
T 1mvl_A 17 PRKPRVLLAAS--------GSVAAIKFGNLCHCFTEWA-EVRAVVTK 54 (209)
T ss_dssp --CCEEEEEEC--------SSGGGGGHHHHHHHHHTTS-EEEEEECT
T ss_pred cCCCEEEEEEe--------CcHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence 44678888774 333 334677899999999 99999876
No 389
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=20.38 E-value=80 Score=30.64 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=27.9
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
.++|+|++|+. |.+....+..|.+.|++|+|+.+..
T Consensus 11 l~~k~VLVVGg-----------G~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGG-----------GEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEE-----------SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECC-----------cHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35688888863 2355668888999999999999873
No 390
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=20.30 E-value=1.7e+02 Score=25.51 Aligned_cols=67 Identities=21% Similarity=0.196 Sum_probs=42.1
Q ss_pred cccCHH--HHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecChHHHHHHHHhCcEEEe
Q 007300 411 EQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 480 (609)
Q Consensus 411 ~~Kg~~--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~~l~~aDv~v~ 480 (609)
.+|+.| +.++++......+.-+++-|+++ +...++.+..+++.+|...+ +.......+.+.||-++.
T Consensus 90 ~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~D--F~plv~~lr~~~G~~V~v~g-~~~~~s~~L~~~ad~fi~ 158 (165)
T 2qip_A 90 AKGDWDVGITLDAIEIAPDVDRVILVSGDGD--FSLLVERIQQRYNKKVTVYG-VPRLTSQTLIDCADNFVA 158 (165)
T ss_dssp CSCCCHHHHHHHHHHHGGGCSEEEEECCCGG--GHHHHHHHHHHHCCEEEEEE-CGGGSCHHHHHHSSEEEE
T ss_pred cCCCccHHHHHHHHHhhccCCEEEEEECChh--HHHHHHHHHHHcCcEEEEEe-CCCcChHHHHHhCCEEEe
Confidence 456655 55677765433465555667766 88888888876565565544 333233468899998764
No 391
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.28 E-value=45 Score=28.27 Aligned_cols=34 Identities=26% Similarity=0.207 Sum_probs=24.9
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeecC
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~~ 128 (609)
+++|++++. |.+-..+++.|.+.||+|.++..+.
T Consensus 7 ~~~viIiG~-----------G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGY-----------GRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECc-----------CHHHHHHHHHHHHCCCCEEEEECCH
Confidence 357877762 2334458889999999999998763
No 392
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=20.28 E-value=88 Score=28.72 Aligned_cols=36 Identities=11% Similarity=0.006 Sum_probs=26.5
Q ss_pred ceEEEEEeecCCccccchHHHHhhchhHHHHhC-CCeEEEEeec
Q 007300 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh~V~vit~~ 127 (609)
|||++-.+. +........|.+.|.+. |++|.++.+.
T Consensus 1 ~~IllgvTG-------siaa~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTG-------ATGAPLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECS-------SSCHHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeC-------hHHHHHHHHHHHHHHhccCCEEEEEECc
Confidence 677776642 22234678899999999 9999999865
No 393
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=20.26 E-value=1.3e+02 Score=29.59 Aligned_cols=38 Identities=5% Similarity=-0.163 Sum_probs=26.8
Q ss_pred HHHhCcEEEecCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007300 471 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 508 (609)
Q Consensus 471 ~l~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 508 (609)
++..+|+++..+....---.+..++..|++||++...+
T Consensus 55 ll~~~DvViiatp~~~h~~~~~~al~aG~~Vv~ekp~~ 92 (320)
T 1f06_A 55 HADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNH 92 (320)
T ss_dssp TTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCG
T ss_pred HhcCCCEEEEcCCcHHHHHHHHHHHHCCCEEEECCCCc
Confidence 44789999887754322234567888999999987654
No 394
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=20.20 E-value=44 Score=35.53 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=26.0
Q ss_pred CceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 84 ~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+.||++|... .+|+. +++.|.+.|++|++|.++
T Consensus 42 KprVVIIGgG------~AGl~-----~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 42 KPNVLILGSG------WGAIS-----FLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCEEEEECSS------HHHHH-----HHHHSCTTTCEEEEEESS
T ss_pred CCCEEEECCc------HHHHH-----HHHHhhhCCCcEEEECCC
Confidence 4599999864 26654 678888899999999875
No 395
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=20.19 E-value=1.7e+02 Score=28.81 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=55.4
Q ss_pred HHHHHHhCCCCCCCCcEEEEEeccccccCHHHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeecCh
Q 007300 386 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 465 (609)
Q Consensus 386 ~~~~~~~gl~~~~~~~~i~~iGrl~~~Kg~~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 465 (609)
-.+++.+|-- +...|.|+|-+....=...++.++.++ ++++.++++..-.....+.+...+.+.++... -+
T Consensus 144 ~Ti~e~~g~l---~gl~va~vGD~~~~rva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~--~d- 214 (308)
T 1ml4_A 144 YTIKKEFGRI---DGLKIGLLGDLKYGRTVHSLAEALTFY---DVELYLISPELLRMPRHIVEELREKGMKVVET--TT- 214 (308)
T ss_dssp HHHHHHSSCS---SSEEEEEESCTTTCHHHHHHHHHGGGS---CEEEEEECCGGGCCCHHHHHHHHHTTCCEEEE--SC-
T ss_pred HHHHHHhCCC---CCeEEEEeCCCCcCchHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHcCCeEEEE--cC-
Confidence 3456666632 336899999875445567788888877 79999999743111223334444555444332 12
Q ss_pred HHHHHHHHhCcEEEecCCC-CCCc
Q 007300 466 PLAHMIIAGADFILIPSRF-EPCG 488 (609)
Q Consensus 466 ~~~~~~l~~aDv~v~pS~~-E~~g 488 (609)
+.+.+..||++...... |.+|
T Consensus 215 --~~eav~~aDvvyt~~~q~er~~ 236 (308)
T 1ml4_A 215 --LEDVIGKLDVLYVTRIQKERFP 236 (308)
T ss_dssp --THHHHTTCSEEEECCCCGGGSS
T ss_pred --HHHHhcCCCEEEECCccccccC
Confidence 23468999988776543 4454
No 396
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=20.18 E-value=1.9e+02 Score=28.58 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=30.1
Q ss_pred HHHHHHhCcEEEecC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007300 468 AHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 511 (609)
Q Consensus 468 ~~~~l~~aDv~v~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 511 (609)
+..+++.||++++.. ..+. +.-.+++.|.-|..+|.+..|+..+
T Consensus 198 l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~ 246 (334)
T 2dbq_A 198 LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVD 246 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccC
Confidence 445789999987743 3332 3334677787888888888887665
No 397
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=20.17 E-value=4.4e+02 Score=24.30 Aligned_cols=85 Identities=12% Similarity=0.073 Sum_probs=51.7
Q ss_pred HHHHHHHhhcccCCeEEEEEeCCChhhHHHHHHHHHhCCCceEEEeec-ChHHHH-HHHHhCcEEEecCCCCCCcHHHHH
Q 007300 416 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLIQLH 493 (609)
Q Consensus 416 ~~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~~l~~aDv~v~pS~~E~~gl~~lE 493 (609)
+.+++.++.+.+..+.++=+......-.+.++++..++++-+...+.. ..+.+. .+-.+||+++.|... .-++-.
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~~d---~~v~~~ 105 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPGLN---PKIVKL 105 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCC---HHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECCCC---HHHHHH
Confidence 345555665555567777666655556778888888887655554443 444443 467889999988532 112334
Q ss_pred HHHcCCceEE
Q 007300 494 AMRYGTVPIV 503 (609)
Q Consensus 494 Ama~G~PvI~ 503 (609)
+-.+|.|++.
T Consensus 106 ar~~g~~~i~ 115 (224)
T 1vhc_A 106 CQDLNFPITP 115 (224)
T ss_dssp HHHTTCCEEC
T ss_pred HHHhCCCEEe
Confidence 4456666554
No 398
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=20.15 E-value=66 Score=32.55 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=26.6
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
|+.++|++|... .+|+. +|..|+++|++|+|+=..
T Consensus 24 ~~~~dV~IVGaG------~aGl~-----~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGG------PVGLT-----MAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCS------HHHHH-----HHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCC------HHHHH-----HHHHHHHCCCCEEEEeCC
Confidence 445789999853 24555 788899999999998754
No 399
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=20.14 E-value=90 Score=31.77 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=27.8
Q ss_pred ceEEEEEeecCCccccchHHH--HhhchhHHHHhCCCeEEEEee
Q 007300 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAP 126 (609)
Q Consensus 85 MkIl~vs~~~~P~~~~GG~~~--~~~~La~aL~~~Gh~V~vit~ 126 (609)
|+|++++. .||.|. ...+|+.+|+++|++|.++..
T Consensus 2 ~~i~~~~g-------kGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLG-------KSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEEC-------SBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 67887774 366665 457799999999999999987
No 400
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=20.14 E-value=91 Score=29.27 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=19.8
Q ss_pred cchHHHHhhchhHHHHhCCCeEEEEeec
Q 007300 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (609)
Q Consensus 100 ~GG~~~~~~~La~aL~~~Gh~V~vit~~ 127 (609)
+||+| ..++++|+++|++|++++..
T Consensus 33 Sg~iG---~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMG---FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHH---HHHHHHHHHTTCEEEEEECS
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 47776 45889999999999988643
No 401
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=20.01 E-value=68 Score=31.91 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=23.5
Q ss_pred CCCceEEEEEeecCCccccchHHHHhhchhHHHHhC-CC-eEEEEeec
Q 007300 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (609)
Q Consensus 82 ~~~MkIl~vs~~~~P~~~~GG~~~~~~~La~aL~~~-Gh-~V~vit~~ 127 (609)
+++|+|++.+. +|++| ..+++.|.++ |+ +|.+++..
T Consensus 19 ~~~k~vlVTGa-------tG~iG---~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 19 LDNQTILITGG-------TGSFG---KCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTTCEEEEETT-------TSHHH---HHHHHHHHHHCCCSEEEEEESC
T ss_pred hCCCEEEEECC-------CcHHH---HHHHHHHHhhCCCCEEEEEECC
Confidence 34566654432 35555 4577888888 97 89887754
Done!