Query 007301
Match_columns 609
No_of_seqs 227 out of 1407
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 22:19:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 5E-197 2E-201 1586.5 41.6 505 102-608 1-506 (555)
2 1pj3_A NAD-dependent malic enz 100.0 2E-196 6E-201 1586.0 41.0 506 102-608 3-511 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 2E-196 7E-201 1590.0 40.2 509 98-608 33-543 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-116 1E-120 939.8 27.7 353 185-608 59-422 (487)
5 2a9f_A Putative malic enzyme ( 100.0 8E-111 3E-115 887.9 24.8 354 174-608 24-384 (398)
6 1vl6_A Malate oxidoreductase; 100.0 7E-106 2E-110 848.5 24.4 351 173-608 27-385 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 5.6E-80 1.9E-84 661.1 26.4 351 176-608 24-389 (439)
8 3gvp_A Adenosylhomocysteinase 98.9 1.9E-08 6.3E-13 108.4 14.6 170 303-511 110-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.8 1.9E-08 6.5E-13 108.3 12.1 130 350-513 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.2 8.7E-07 3E-11 93.8 5.6 218 218-501 26-295 (401)
11 3n58_A Adenosylhomocysteinase; 97.8 8.2E-05 2.8E-09 80.8 11.5 128 350-511 207-345 (464)
12 3ond_A Adenosylhomocysteinase; 97.7 8.8E-05 3E-09 81.1 8.9 132 350-514 225-366 (488)
13 1l7d_A Nicotinamide nucleotide 97.0 0.0023 7.9E-08 66.8 10.5 225 219-500 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.0 0.00096 3.3E-08 71.4 7.2 110 380-507 187-322 (405)
15 3k92_A NAD-GDH, NAD-specific g 96.7 0.021 7.1E-07 61.6 14.6 178 304-501 125-329 (424)
16 3p2y_A Alanine dehydrogenase/p 96.6 0.0026 9E-08 67.5 6.7 100 381-501 182-305 (381)
17 3d4o_A Dipicolinate synthase s 96.4 0.0088 3E-07 59.9 9.2 122 361-511 133-255 (293)
18 3aoe_E Glutamate dehydrogenase 96.3 0.045 1.5E-06 58.9 14.1 186 305-513 123-332 (419)
19 4fcc_A Glutamate dehydrogenase 96.1 0.2 7E-06 54.4 18.3 183 304-501 140-354 (450)
20 3jyo_A Quinate/shikimate dehyd 95.9 0.016 5.5E-07 58.6 7.8 88 367-474 111-205 (283)
21 3r3j_A Glutamate dehydrogenase 95.9 0.28 9.6E-06 53.4 17.8 190 305-513 145-368 (456)
22 1a4i_A Methylenetetrahydrofola 95.8 0.019 6.6E-07 59.3 8.3 96 361-500 143-239 (301)
23 3aog_A Glutamate dehydrogenase 95.8 0.11 3.8E-06 56.2 14.3 179 305-501 140-344 (440)
24 3l07_A Bifunctional protein fo 95.7 0.028 9.4E-07 57.8 8.6 92 363-498 141-233 (285)
25 2yfq_A Padgh, NAD-GDH, NAD-spe 95.5 0.16 5.6E-06 54.6 14.3 179 305-501 116-326 (421)
26 1edz_A 5,10-methylenetetrahydr 95.5 0.021 7.3E-07 59.3 7.1 113 365-501 150-278 (320)
27 3p2o_A Bifunctional protein fo 95.3 0.041 1.4E-06 56.5 8.6 96 362-501 139-236 (285)
28 3don_A Shikimate dehydrogenase 95.3 0.02 6.8E-07 58.0 5.9 118 352-501 94-214 (277)
29 3ngx_A Bifunctional protein fo 95.2 0.045 1.5E-06 56.0 8.1 92 361-498 130-222 (276)
30 1b0a_A Protein (fold bifunctio 95.1 0.039 1.3E-06 56.8 7.7 96 361-500 137-233 (288)
31 4a5o_A Bifunctional protein fo 95.1 0.053 1.8E-06 55.7 8.4 95 363-501 141-237 (286)
32 2egg_A AROE, shikimate 5-dehyd 95.0 0.017 5.7E-07 58.5 4.6 87 368-474 125-215 (297)
33 3tnl_A Shikimate dehydrogenase 95.0 0.035 1.2E-06 57.3 6.9 50 367-427 138-187 (315)
34 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.012 4.2E-07 52.2 3.0 88 361-474 4-91 (144)
35 3t4e_A Quinate/shikimate dehyd 94.9 0.037 1.3E-06 57.0 6.9 90 368-474 133-231 (312)
36 2tmg_A Protein (glutamate dehy 94.9 0.53 1.8E-05 50.5 15.7 179 305-501 114-319 (415)
37 3u62_A Shikimate dehydrogenase 94.8 0.059 2E-06 53.7 7.9 145 314-499 42-201 (253)
38 2bma_A Glutamate dehydrogenase 94.8 0.48 1.6E-05 51.8 15.4 178 306-501 159-372 (470)
39 4a26_A Putative C-1-tetrahydro 94.8 0.062 2.1E-06 55.5 8.0 95 360-498 142-239 (300)
40 1v9l_A Glutamate dehydrogenase 94.7 0.2 7E-06 53.8 12.2 179 305-501 115-325 (421)
41 1gpj_A Glutamyl-tRNA reductase 94.7 0.21 7.1E-06 52.5 11.9 102 380-501 164-269 (404)
42 1v8b_A Adenosylhomocysteinase; 94.5 0.15 5E-06 55.8 10.6 123 358-513 235-357 (479)
43 1bgv_A Glutamate dehydrogenase 94.3 0.98 3.3E-05 49.0 16.3 179 306-501 136-350 (449)
44 2rir_A Dipicolinate synthase, 94.3 0.065 2.2E-06 53.7 6.8 110 374-511 148-257 (300)
45 2c2x_A Methylenetetrahydrofola 93.8 0.13 4.4E-06 52.8 7.8 98 361-500 136-234 (281)
46 1c1d_A L-phenylalanine dehydro 93.7 0.21 7.3E-06 52.4 9.6 165 306-502 91-266 (355)
47 1leh_A Leucine dehydrogenase; 93.7 0.12 4.3E-06 54.2 7.8 159 311-501 93-264 (364)
48 1pjc_A Protein (L-alanine dehy 93.7 0.15 5.3E-06 52.6 8.4 96 381-500 165-269 (361)
49 2o4c_A Erythronate-4-phosphate 93.4 0.55 1.9E-05 49.7 12.1 186 351-582 81-281 (380)
50 3tri_A Pyrroline-5-carboxylate 93.3 0.16 5.5E-06 50.6 7.5 121 383-532 3-127 (280)
51 1gtm_A Glutamate dehydrogenase 93.1 0.55 1.9E-05 50.3 11.6 115 305-431 114-250 (419)
52 3fbt_A Chorismate mutase and s 92.9 0.15 5E-06 51.9 6.5 158 368-581 107-274 (282)
53 3d64_A Adenosylhomocysteinase; 92.9 0.18 6.3E-06 55.2 7.8 110 361-501 258-367 (494)
54 3o8q_A Shikimate 5-dehydrogena 92.9 0.15 5E-06 51.6 6.5 50 367-427 110-159 (281)
55 1pzg_A LDH, lactate dehydrogen 92.6 0.19 6.6E-06 51.6 7.2 120 384-524 10-157 (331)
56 1mld_A Malate dehydrogenase; o 92.6 0.28 9.6E-06 50.0 8.3 101 385-501 2-120 (314)
57 3pwz_A Shikimate dehydrogenase 92.6 0.16 5.6E-06 51.0 6.3 99 314-427 44-153 (272)
58 2ekl_A D-3-phosphoglycerate de 92.5 1.2 4.1E-05 45.4 12.8 121 350-499 90-233 (313)
59 2hk9_A Shikimate dehydrogenase 92.5 0.22 7.7E-06 49.3 7.2 84 368-474 114-197 (275)
60 1hyh_A L-hicdh, L-2-hydroxyiso 92.5 0.14 4.7E-06 51.5 5.7 102 384-502 2-126 (309)
61 3dtt_A NADP oxidoreductase; st 92.4 0.15 5.3E-06 49.4 5.8 109 377-501 13-127 (245)
62 3oet_A Erythronate-4-phosphate 92.3 0.68 2.3E-05 49.1 11.0 118 350-499 83-211 (381)
63 2ewd_A Lactate dehydrogenase,; 92.2 0.2 6.9E-06 50.6 6.5 100 384-502 5-125 (317)
64 3u95_A Glycoside hydrolase, fa 92.2 0.22 7.5E-06 54.1 7.2 45 479-526 140-184 (477)
65 3tum_A Shikimate dehydrogenase 92.2 0.23 7.9E-06 50.0 6.8 48 368-426 110-157 (269)
66 3mw9_A GDH 1, glutamate dehydr 92.1 0.72 2.4E-05 50.8 11.0 180 304-501 135-352 (501)
67 2d5c_A AROE, shikimate 5-dehyd 92.0 0.17 5.7E-06 49.6 5.5 81 368-474 102-182 (263)
68 2eez_A Alanine dehydrogenase; 91.8 0.3 1E-05 50.5 7.5 97 380-500 163-268 (369)
69 1p77_A Shikimate 5-dehydrogena 91.5 0.23 7.7E-06 49.3 5.8 49 367-427 103-151 (272)
70 2dbq_A Glyoxylate reductase; D 91.4 2.3 7.9E-05 43.6 13.4 121 350-499 89-241 (334)
71 1nyt_A Shikimate 5-dehydrogena 91.4 0.33 1.1E-05 48.1 6.9 49 367-427 103-151 (271)
72 3fef_A Putative glucosidase LP 91.4 0.2 6.9E-06 54.2 5.8 106 381-501 3-149 (450)
73 2v6b_A L-LDH, L-lactate dehydr 91.4 0.1 3.5E-06 52.8 3.3 122 385-524 2-139 (304)
74 3ce6_A Adenosylhomocysteinase; 91.3 1.3 4.3E-05 48.6 11.9 108 375-513 266-374 (494)
75 1x7d_A Ornithine cyclodeaminas 91.3 0.29 9.9E-06 50.9 6.6 114 368-509 116-238 (350)
76 1b8p_A Protein (malate dehydro 91.0 0.16 5.4E-06 52.0 4.2 110 384-501 6-136 (329)
77 2i6t_A Ubiquitin-conjugating e 90.9 0.4 1.4E-05 48.9 7.1 120 384-524 15-150 (303)
78 2gcg_A Glyoxylate reductase/hy 90.9 1.8 6.1E-05 44.2 11.9 140 331-499 80-247 (330)
79 1o6z_A MDH, malate dehydrogena 90.8 0.25 8.4E-06 50.0 5.4 101 385-501 2-122 (303)
80 3hdj_A Probable ornithine cycl 90.7 0.92 3.2E-05 46.4 9.7 111 370-511 110-227 (313)
81 1ldn_A L-lactate dehydrogenase 90.7 0.25 8.5E-06 50.3 5.4 105 384-501 7-126 (316)
82 1zud_1 Adenylyltransferase THI 90.3 0.39 1.3E-05 47.4 6.2 37 380-427 25-61 (251)
83 3k5p_A D-3-phosphoglycerate de 90.1 6.8 0.00023 42.0 16.0 193 349-580 101-322 (416)
84 2g1u_A Hypothetical protein TM 90.0 0.61 2.1E-05 41.6 6.8 102 379-499 15-119 (155)
85 2cuk_A Glycerate dehydrogenase 89.7 4.1 0.00014 41.4 13.4 184 349-580 86-302 (311)
86 2hjr_A Malate dehydrogenase; m 89.6 0.23 7.9E-06 50.9 4.1 123 384-528 15-160 (328)
87 2zqz_A L-LDH, L-lactate dehydr 89.6 0.26 8.8E-06 50.7 4.5 106 383-501 9-128 (326)
88 1obb_A Maltase, alpha-glucosid 89.5 0.28 9.5E-06 53.5 4.9 124 383-524 3-174 (480)
89 1t2d_A LDH-P, L-lactate dehydr 89.5 0.43 1.5E-05 48.9 6.0 123 384-528 5-155 (322)
90 2i99_A MU-crystallin homolog; 89.5 0.96 3.3E-05 45.7 8.5 113 368-508 122-237 (312)
91 1lu9_A Methylene tetrahydromet 89.3 1.5 5E-05 43.4 9.5 81 333-427 64-152 (287)
92 1omo_A Alanine dehydrogenase; 89.2 1.1 3.8E-05 45.7 8.8 112 368-509 112-229 (322)
93 1xdw_A NAD+-dependent (R)-2-hy 89.2 3 0.0001 42.7 12.1 137 331-499 73-235 (331)
94 2rcy_A Pyrroline carboxylate r 89.2 2.1 7.1E-05 41.0 10.3 92 383-502 4-95 (262)
95 3ba1_A HPPR, hydroxyphenylpyru 89.0 2.4 8.1E-05 43.8 11.2 172 362-580 124-324 (333)
96 2vhw_A Alanine dehydrogenase; 89.0 0.42 1.4E-05 49.8 5.6 95 380-498 165-268 (377)
97 1wwk_A Phosphoglycerate dehydr 89.0 2.8 9.4E-05 42.6 11.5 108 362-499 103-233 (307)
98 1ez4_A Lactate dehydrogenase; 88.9 0.32 1.1E-05 49.8 4.5 105 384-501 6-124 (318)
99 4g2n_A D-isomer specific 2-hyd 88.8 2.7 9.4E-05 43.7 11.5 190 350-580 116-336 (345)
100 1a5z_A L-lactate dehydrogenase 88.8 0.47 1.6E-05 48.2 5.6 101 385-503 2-121 (319)
101 3rui_A Ubiquitin-like modifier 88.7 0.44 1.5E-05 49.9 5.5 37 380-427 31-67 (340)
102 3d0o_A L-LDH 1, L-lactate dehy 88.6 0.4 1.4E-05 48.9 5.0 107 382-501 5-126 (317)
103 1y6j_A L-lactate dehydrogenase 88.6 0.44 1.5E-05 48.6 5.4 100 384-501 8-126 (318)
104 2hmt_A YUAA protein; RCK, KTN, 88.6 0.35 1.2E-05 41.3 3.9 103 381-501 4-108 (144)
105 4e12_A Diketoreductase; oxidor 88.6 0.13 4.5E-06 50.9 1.4 32 384-427 5-36 (283)
106 3h5n_A MCCB protein; ubiquitin 88.5 1.4 5E-05 45.6 9.2 38 379-427 114-151 (353)
107 2zyd_A 6-phosphogluconate dehy 88.3 0.87 3E-05 49.2 7.6 102 380-501 12-116 (480)
108 3jtm_A Formate dehydrogenase, 88.2 2.6 9E-05 43.9 11.0 196 349-580 107-330 (351)
109 2j6i_A Formate dehydrogenase; 87.9 2.2 7.6E-05 44.5 10.2 144 330-499 87-258 (364)
110 3d1l_A Putative NADP oxidoredu 87.9 0.32 1.1E-05 47.0 3.6 98 380-501 7-105 (266)
111 1smk_A Malate dehydrogenase, g 87.9 0.56 1.9E-05 48.0 5.6 104 384-501 9-128 (326)
112 1qp8_A Formate dehydrogenase; 87.7 6.2 0.00021 40.0 13.1 118 349-499 70-211 (303)
113 3phh_A Shikimate dehydrogenase 87.6 1.3 4.4E-05 44.7 7.9 98 368-498 107-209 (269)
114 3kkj_A Amine oxidase, flavin-c 87.2 0.55 1.9E-05 41.3 4.3 31 385-427 4-34 (336)
115 3vku_A L-LDH, L-lactate dehydr 87.1 0.53 1.8E-05 48.7 4.9 116 383-514 9-138 (326)
116 4huj_A Uncharacterized protein 87.1 0.67 2.3E-05 44.2 5.3 93 384-502 24-117 (220)
117 2d0i_A Dehydrogenase; structur 87.1 3.4 0.00012 42.4 10.9 160 379-581 142-310 (333)
118 1s6y_A 6-phospho-beta-glucosid 87.0 0.3 1E-05 52.6 3.1 127 384-524 8-175 (450)
119 4e21_A 6-phosphogluconate dehy 87.0 1.7 5.8E-05 45.2 8.7 95 381-500 20-117 (358)
120 4hy3_A Phosphoglycerate oxidor 86.8 2.2 7.6E-05 44.8 9.5 179 361-581 133-340 (365)
121 1lld_A L-lactate dehydrogenase 86.6 0.45 1.5E-05 47.4 3.9 102 384-502 8-128 (319)
122 1z82_A Glycerol-3-phosphate de 86.6 0.49 1.7E-05 47.7 4.2 98 383-503 14-116 (335)
123 1nvt_A Shikimate 5'-dehydrogen 86.6 0.56 1.9E-05 46.7 4.6 49 366-427 111-159 (287)
124 3gvi_A Malate dehydrogenase; N 86.5 0.83 2.8E-05 47.1 5.9 106 381-501 5-127 (324)
125 1txg_A Glycerol-3-phosphate de 86.4 1.1 3.9E-05 44.3 6.7 94 385-501 2-107 (335)
126 1sc6_A PGDH, D-3-phosphoglycer 86.4 9 0.00031 40.6 13.9 191 349-580 90-311 (404)
127 3h8v_A Ubiquitin-like modifier 86.4 0.67 2.3E-05 47.4 5.1 38 379-427 32-69 (292)
128 1hdo_A Biliverdin IX beta redu 86.1 2.5 8.6E-05 37.9 8.3 98 383-498 3-111 (206)
129 3evt_A Phosphoglycerate dehydr 86.0 2.5 8.4E-05 43.6 9.2 190 349-580 82-301 (324)
130 1npy_A Hypothetical shikimate 86.0 1 3.5E-05 45.2 6.2 48 368-427 105-152 (271)
131 2dpo_A L-gulonate 3-dehydrogen 86.0 0.31 1E-05 50.0 2.4 33 383-427 6-38 (319)
132 4dgs_A Dehydrogenase; structur 86.0 5 0.00017 41.7 11.5 176 362-580 130-331 (340)
133 3gt0_A Pyrroline-5-carboxylate 85.9 1.4 4.9E-05 42.3 6.9 98 384-502 3-101 (247)
134 1guz_A Malate dehydrogenase; o 85.8 0.69 2.4E-05 46.7 4.9 100 385-501 2-121 (310)
135 4gsl_A Ubiquitin-like modifier 85.8 0.78 2.7E-05 51.7 5.6 37 380-427 323-359 (615)
136 1u8x_X Maltose-6'-phosphate gl 85.6 0.47 1.6E-05 51.5 3.7 126 383-524 28-194 (472)
137 2xxj_A L-LDH, L-lactate dehydr 85.5 0.35 1.2E-05 49.3 2.5 100 384-501 1-119 (310)
138 1ur5_A Malate dehydrogenase; o 85.5 0.95 3.3E-05 45.8 5.7 99 384-501 3-122 (309)
139 1oju_A MDH, malate dehydrogena 85.4 0.78 2.7E-05 46.6 5.0 123 385-524 2-143 (294)
140 1j4a_A D-LDH, D-lactate dehydr 85.3 8.7 0.0003 39.4 12.8 195 349-581 91-323 (333)
141 2yq5_A D-isomer specific 2-hyd 85.1 8.8 0.0003 39.9 12.9 195 350-582 92-325 (343)
142 3hg7_A D-isomer specific 2-hyd 85.0 2.4 8.4E-05 43.7 8.6 188 351-582 89-304 (324)
143 2pi1_A D-lactate dehydrogenase 85.0 4.9 0.00017 41.4 10.8 193 351-580 87-319 (334)
144 1dxy_A D-2-hydroxyisocaproate 84.9 12 0.00042 38.3 13.8 120 349-499 89-234 (333)
145 2d4a_B Malate dehydrogenase; a 84.8 0.79 2.7E-05 46.6 4.8 98 385-501 1-119 (308)
146 2p4q_A 6-phosphogluconate dehy 84.8 2.1 7.1E-05 46.5 8.3 98 384-501 11-112 (497)
147 3tl2_A Malate dehydrogenase; c 84.8 0.67 2.3E-05 47.6 4.2 107 381-501 6-130 (315)
148 3vh1_A Ubiquitin-like modifier 84.7 0.92 3.2E-05 50.9 5.6 38 379-427 323-360 (598)
149 3i83_A 2-dehydropantoate 2-red 84.7 1.1 3.8E-05 44.9 5.7 98 384-502 3-109 (320)
150 1up7_A 6-phospho-beta-glucosid 84.5 1.2 4E-05 47.6 6.1 124 384-524 3-164 (417)
151 1ks9_A KPA reductase;, 2-dehyd 84.5 1.7 5.7E-05 41.9 6.7 95 385-501 2-100 (291)
152 1y7t_A Malate dehydrogenase; N 84.4 0.74 2.5E-05 46.5 4.3 110 384-501 5-133 (327)
153 3p7m_A Malate dehydrogenase; p 84.2 0.58 2E-05 48.1 3.5 103 381-501 3-125 (321)
154 2izz_A Pyrroline-5-carboxylate 83.8 2.2 7.6E-05 43.0 7.5 100 382-502 21-122 (322)
155 1jw9_B Molybdopterin biosynthe 83.7 0.79 2.7E-05 45.0 4.0 38 380-428 28-65 (249)
156 3lk7_A UDP-N-acetylmuramoylala 83.6 1.6 5.3E-05 46.3 6.6 121 380-538 6-126 (451)
157 4egb_A DTDP-glucose 4,6-dehydr 83.6 3.7 0.00013 40.4 8.9 106 381-498 22-149 (346)
158 3pp8_A Glyoxylate/hydroxypyruv 83.5 3.1 0.00011 42.7 8.5 192 350-581 86-302 (315)
159 2w2k_A D-mandelate dehydrogena 83.5 7.5 0.00026 40.1 11.5 167 378-580 158-329 (348)
160 3ado_A Lambda-crystallin; L-gu 83.5 1.5 5.1E-05 45.3 6.2 32 383-426 6-37 (319)
161 2raf_A Putative dinucleotide-b 83.5 2.3 7.8E-05 40.3 7.1 80 379-502 15-94 (209)
162 2nac_A NAD-dependent formate d 83.5 4.5 0.00015 43.0 9.9 180 362-580 150-357 (393)
163 3nep_X Malate dehydrogenase; h 83.4 0.59 2E-05 48.1 3.1 104 385-501 2-121 (314)
164 1x0v_A GPD-C, GPDH-C, glycerol 83.2 2.6 8.9E-05 42.3 7.7 111 383-502 8-128 (354)
165 3ic5_A Putative saccharopine d 83.1 0.98 3.4E-05 37.2 3.9 87 383-488 5-92 (118)
166 1gdh_A D-glycerate dehydrogena 82.9 6.3 0.00022 40.2 10.5 122 350-499 89-239 (320)
167 1f0y_A HCDH, L-3-hydroxyacyl-C 82.8 1.1 3.7E-05 44.5 4.6 32 384-427 16-47 (302)
168 2iz1_A 6-phosphogluconate dehy 82.8 2.5 8.6E-05 45.3 7.8 99 383-501 5-106 (474)
169 4fgw_A Glycerol-3-phosphate de 82.7 1.6 5.4E-05 46.5 6.1 96 384-488 35-140 (391)
170 1hye_A L-lactate/malate dehydr 82.7 1.3 4.6E-05 44.8 5.4 102 385-501 2-125 (313)
171 4ina_A Saccharopine dehydrogen 81.9 1.8 6.2E-05 45.4 6.2 96 384-499 2-108 (405)
172 3pqe_A L-LDH, L-lactate dehydr 81.9 0.72 2.5E-05 47.6 3.1 122 383-524 5-147 (326)
173 3gvx_A Glycerate dehydrogenase 81.7 9.1 0.00031 38.8 11.1 177 362-582 85-283 (290)
174 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.6 2.2 7.4E-05 45.9 6.8 97 385-501 3-106 (478)
175 1jay_A Coenzyme F420H2:NADP+ o 81.2 0.78 2.7E-05 42.6 2.8 94 385-502 2-101 (212)
176 2g76_A 3-PGDH, D-3-phosphoglyc 81.2 7.6 0.00026 40.1 10.4 186 351-580 112-328 (335)
177 3gg9_A D-3-phosphoglycerate de 81.0 5.7 0.00019 41.4 9.5 189 350-580 97-325 (352)
178 2vns_A Metalloreductase steap3 80.8 1.4 4.7E-05 41.9 4.4 94 381-502 26-119 (215)
179 3gpi_A NAD-dependent epimerase 80.7 1.3 4.6E-05 42.6 4.4 97 382-498 2-109 (286)
180 4dll_A 2-hydroxy-3-oxopropiona 80.7 1.2 4.1E-05 44.9 4.2 34 382-427 30-63 (320)
181 3k96_A Glycerol-3-phosphate de 80.6 2.5 8.5E-05 43.8 6.6 102 383-502 29-137 (356)
182 1yj8_A Glycerol-3-phosphate de 80.6 2.3 7.8E-05 43.6 6.3 110 384-502 22-145 (375)
183 2pgd_A 6-phosphogluconate dehy 80.6 3.2 0.00011 44.6 7.6 98 384-501 3-104 (482)
184 3doj_A AT3G25530, dehydrogenas 80.5 1.8 6.2E-05 43.3 5.4 36 380-427 18-53 (310)
185 3abi_A Putative uncharacterize 80.2 1.5 5.1E-05 45.0 4.7 89 384-499 17-109 (365)
186 1mx3_A CTBP1, C-terminal bindi 79.9 8.8 0.0003 39.8 10.5 210 330-580 88-334 (347)
187 3pef_A 6-phosphogluconate dehy 79.8 1.5 5.3E-05 43.0 4.5 32 384-427 2-33 (287)
188 1hyu_A AHPF, alkyl hydroperoxi 79.8 1.6 5.6E-05 46.8 5.1 98 314-426 135-243 (521)
189 1y8q_A Ubiquitin-like 1 activa 79.7 1.5 5.2E-05 45.4 4.6 37 380-427 33-69 (346)
190 3b1f_A Putative prephenate deh 79.6 2.2 7.4E-05 41.7 5.5 95 383-499 6-102 (290)
191 3pdu_A 3-hydroxyisobutyrate de 79.6 1.7 5.9E-05 42.6 4.8 32 384-427 2-33 (287)
192 3r6d_A NAD-dependent epimerase 79.5 2 6.9E-05 39.7 5.0 95 384-498 6-108 (221)
193 2uyy_A N-PAC protein; long-cha 79.3 1.9 6.6E-05 42.7 5.1 32 384-427 31-62 (316)
194 2qrj_A Saccharopine dehydrogen 79.1 5.4 0.00019 42.6 8.7 71 383-485 214-289 (394)
195 2pzm_A Putative nucleotide sug 79.0 5.4 0.00018 39.3 8.2 103 379-498 16-136 (330)
196 3l6d_A Putative oxidoreductase 78.9 2.2 7.7E-05 42.6 5.5 36 380-427 6-41 (306)
197 3k6j_A Protein F01G10.3, confi 78.9 1.9 6.6E-05 46.7 5.3 105 457-573 151-267 (460)
198 3o38_A Short chain dehydrogena 78.8 2.6 8.8E-05 40.4 5.7 76 380-474 19-112 (266)
199 2h78_A Hibadh, 3-hydroxyisobut 78.4 1.5 5.2E-05 43.2 4.0 32 384-427 4-35 (302)
200 4e5n_A Thermostable phosphite 78.3 5.3 0.00018 41.1 8.2 197 350-582 89-319 (330)
201 4gwg_A 6-phosphogluconate dehy 78.2 4.1 0.00014 44.3 7.7 99 383-501 4-106 (484)
202 2q1w_A Putative nucleotide sug 78.1 8.1 0.00028 38.1 9.2 104 380-498 18-137 (333)
203 3vrd_B FCCB subunit, flavocyto 77.8 2.5 8.4E-05 42.9 5.5 35 383-427 2-36 (401)
204 3e8x_A Putative NAD-dependent 77.8 3.9 0.00013 38.2 6.4 101 379-499 17-132 (236)
205 3cky_A 2-hydroxymethyl glutara 77.6 1.9 6.6E-05 42.1 4.5 32 384-427 5-36 (301)
206 2z2v_A Hypothetical protein PH 77.5 1.6 5.6E-05 45.3 4.1 120 382-530 15-137 (365)
207 3qha_A Putative oxidoreductase 77.3 2.1 7.3E-05 42.5 4.7 33 383-427 15-47 (296)
208 5mdh_A Malate dehydrogenase; o 76.7 1.2 4.1E-05 46.1 2.8 121 384-515 4-143 (333)
209 1yb4_A Tartronic semialdehyde 76.7 3.1 0.00011 40.5 5.6 30 384-425 4-33 (295)
210 2x0j_A Malate dehydrogenase; o 76.3 2.7 9.3E-05 42.9 5.3 104 385-501 2-121 (294)
211 3dhn_A NAD-dependent epimerase 76.1 4.1 0.00014 37.5 6.0 97 384-498 5-112 (227)
212 3c24_A Putative oxidoreductase 76.1 2.9 0.0001 40.9 5.3 91 384-501 12-104 (286)
213 2x5o_A UDP-N-acetylmuramoylala 75.9 14 0.00049 38.8 10.8 115 380-536 2-116 (439)
214 2z1m_A GDP-D-mannose dehydrata 75.9 6 0.00021 38.5 7.4 101 382-498 2-127 (345)
215 3fi9_A Malate dehydrogenase; s 75.7 1.8 6.1E-05 45.1 3.8 107 381-501 6-129 (343)
216 4id9_A Short-chain dehydrogena 75.3 7.5 0.00026 38.2 8.0 97 379-498 15-126 (347)
217 3ip1_A Alcohol dehydrogenase, 75.3 11 0.00039 38.8 9.7 93 370-485 200-304 (404)
218 2dq4_A L-threonine 3-dehydroge 75.3 5 0.00017 40.3 6.9 87 366-472 149-240 (343)
219 3i6i_A Putative leucoanthocyan 75.0 1.7 5.9E-05 43.2 3.4 101 380-495 7-117 (346)
220 1lss_A TRK system potassium up 74.9 3.2 0.00011 35.1 4.6 33 383-427 4-36 (140)
221 1id1_A Putative potassium chan 74.9 2.6 9E-05 37.3 4.2 34 382-427 2-35 (153)
222 4aj2_A L-lactate dehydrogenase 74.7 1.4 4.6E-05 45.8 2.6 128 380-524 16-161 (331)
223 3ggo_A Prephenate dehydrogenas 74.5 5.7 0.00019 40.2 7.0 34 384-427 34-67 (314)
224 3kb6_A D-lactate dehydrogenase 74.4 15 0.00051 37.9 10.2 191 351-580 87-319 (334)
225 3qsg_A NAD-binding phosphogluc 74.1 5.7 0.0002 39.8 6.9 34 383-427 24-57 (312)
226 1tt5_B Ubiquitin-activating en 73.9 2.1 7E-05 46.0 3.8 37 380-427 37-73 (434)
227 3c85_A Putative glutathione-re 73.8 2.1 7.2E-05 38.9 3.3 37 380-427 36-72 (183)
228 1vpd_A Tartronate semialdehyde 72.7 2.5 8.5E-05 41.3 3.8 32 384-427 6-37 (299)
229 3m2p_A UDP-N-acetylglucosamine 72.7 11 0.00037 36.6 8.4 93 384-498 3-109 (311)
230 3slg_A PBGP3 protein; structur 72.6 18 0.00063 35.8 10.2 101 380-498 21-141 (372)
231 3ldh_A Lactate dehydrogenase; 72.5 1.6 5.4E-05 45.4 2.4 124 383-524 21-163 (330)
232 4ezb_A Uncharacterized conserv 72.2 3.4 0.00012 41.7 4.8 33 384-427 25-57 (317)
233 3d1c_A Flavin-containing putat 72.2 3 0.0001 41.1 4.3 35 383-428 4-38 (369)
234 4hb9_A Similarities with proba 71.9 3.3 0.00011 41.1 4.5 31 384-426 2-32 (412)
235 3vtz_A Glucose 1-dehydrogenase 71.5 18 0.00061 35.1 9.6 79 378-474 9-92 (269)
236 3fwz_A Inner membrane protein 70.9 2.5 8.4E-05 37.2 3.0 32 384-427 8-39 (140)
237 4b4u_A Bifunctional protein fo 70.7 12 0.00042 38.7 8.5 92 362-497 158-250 (303)
238 4b8w_A GDP-L-fucose synthase; 70.7 7.6 0.00026 36.9 6.6 93 380-498 3-113 (319)
239 1i36_A Conserved hypothetical 70.2 6.8 0.00023 37.5 6.2 20 385-404 2-21 (264)
240 1bg6_A N-(1-D-carboxylethyl)-L 69.9 10 0.00035 37.7 7.6 96 384-499 5-110 (359)
241 3ehe_A UDP-glucose 4-epimerase 69.9 17 0.0006 35.1 9.1 95 385-498 3-114 (313)
242 4a9w_A Monooxygenase; baeyer-v 69.6 3.3 0.00011 40.1 3.8 34 383-428 3-36 (357)
243 2ph5_A Homospermidine synthase 69.5 11 0.00039 41.2 8.4 100 382-499 12-115 (480)
244 2g5c_A Prephenate dehydrogenas 68.9 7.3 0.00025 37.7 6.2 97 384-501 2-99 (281)
245 1y8q_B Anthracycline-, ubiquit 68.8 3.2 0.00011 47.0 4.0 37 380-427 14-50 (640)
246 3hhp_A Malate dehydrogenase; M 68.6 6.1 0.00021 40.5 5.7 103 385-501 2-121 (312)
247 3fbs_A Oxidoreductase; structu 68.3 4.5 0.00015 38.2 4.4 32 384-427 3-34 (297)
248 3nrc_A Enoyl-[acyl-carrier-pro 68.3 8.5 0.00029 37.3 6.5 79 380-475 23-115 (280)
249 2c20_A UDP-glucose 4-epimerase 68.3 12 0.00043 36.2 7.7 99 384-498 2-118 (330)
250 1n2s_A DTDP-4-, DTDP-glucose o 67.7 6.3 0.00022 37.8 5.4 86 385-498 2-104 (299)
251 2yjz_A Metalloreductase steap4 70.9 1.1 3.8E-05 42.6 0.0 92 381-501 17-108 (201)
252 1ygy_A PGDH, D-3-phosphoglycer 67.5 24 0.00082 38.4 10.5 121 349-498 87-232 (529)
253 3s2u_A UDP-N-acetylglucosamine 67.5 7.9 0.00027 39.3 6.3 41 455-499 84-124 (365)
254 3fg2_P Putative rubredoxin red 67.5 5 0.00017 41.1 4.8 35 384-428 2-36 (404)
255 2bka_A CC3, TAT-interacting pr 67.3 11 0.00039 34.8 6.9 102 381-498 16-132 (242)
256 2p5y_A UDP-glucose 4-epimerase 67.1 12 0.00043 36.1 7.4 98 385-498 2-117 (311)
257 1uzm_A 3-oxoacyl-[acyl-carrier 66.9 15 0.00051 34.9 7.8 78 378-474 10-92 (247)
258 3oz2_A Digeranylgeranylglycero 66.7 4.8 0.00016 39.5 4.3 31 385-427 6-36 (397)
259 1e6u_A GDP-fucose synthetase; 66.5 7.9 0.00027 37.5 5.8 87 383-498 3-107 (321)
260 3f8d_A Thioredoxin reductase ( 66.2 5.2 0.00018 38.2 4.4 33 383-427 15-47 (323)
261 2pv7_A T-protein [includes: ch 66.0 17 0.00057 36.1 8.2 32 384-427 22-54 (298)
262 2zbw_A Thioredoxin reductase; 66.0 5.2 0.00018 39.0 4.4 34 383-428 5-38 (335)
263 3lzw_A Ferredoxin--NADP reduct 65.9 5.4 0.00018 38.4 4.5 33 383-427 7-39 (332)
264 3alj_A 2-methyl-3-hydroxypyrid 65.9 5.4 0.00018 40.1 4.6 38 380-429 8-45 (379)
265 2nvu_B Maltose binding protein 65.5 4.4 0.00015 46.0 4.3 35 382-427 410-444 (805)
266 3hyw_A Sulfide-quinone reducta 65.4 4.1 0.00014 42.3 3.8 34 384-427 3-36 (430)
267 3e48_A Putative nucleoside-dip 65.4 11 0.00037 36.1 6.5 97 385-498 2-106 (289)
268 2ahr_A Putative pyrroline carb 65.3 4.4 0.00015 38.8 3.7 32 384-427 4-35 (259)
269 2dkn_A 3-alpha-hydroxysteroid 64.7 9.6 0.00033 35.4 5.9 69 385-475 3-74 (255)
270 3ew7_A LMO0794 protein; Q8Y8U8 64.7 14 0.00049 33.4 6.9 91 385-498 2-103 (221)
271 3klj_A NAD(FAD)-dependent dehy 64.5 6.2 0.00021 40.7 4.9 36 383-430 9-44 (385)
272 3pdi_B Nitrogenase MOFE cofact 64.2 6 0.00021 42.5 4.9 75 379-472 309-384 (458)
273 3ec7_A Putative dehydrogenase; 64.1 3.2 0.00011 42.3 2.6 97 380-495 20-116 (357)
274 3ef6_A Toluene 1,2-dioxygenase 64.0 9.6 0.00033 39.2 6.2 37 384-430 3-39 (410)
275 3ek2_A Enoyl-(acyl-carrier-pro 63.9 7.3 0.00025 36.9 5.0 81 378-474 9-103 (271)
276 2jae_A L-amino acid oxidase; o 63.9 6.1 0.00021 41.1 4.7 42 376-429 4-45 (489)
277 2ywl_A Thioredoxin reductase r 63.8 6.7 0.00023 35.0 4.4 32 384-427 2-33 (180)
278 2gf2_A Hibadh, 3-hydroxyisobut 63.6 4.6 0.00016 39.3 3.6 31 385-427 2-32 (296)
279 3k13_A 5-methyltetrahydrofolat 63.1 8.5 0.00029 39.5 5.6 79 315-426 94-179 (300)
280 3llv_A Exopolyphosphatase-rela 62.9 7.3 0.00025 33.6 4.4 34 382-427 5-38 (141)
281 3lxd_A FAD-dependent pyridine 62.9 5.9 0.0002 40.6 4.4 37 382-428 8-44 (415)
282 3itj_A Thioredoxin reductase 1 62.8 4.9 0.00017 38.8 3.5 33 383-427 22-54 (338)
283 2cvz_A Dehydrogenase, 3-hydrox 62.7 5.2 0.00018 38.6 3.7 30 385-427 3-32 (289)
284 2yy7_A L-threonine dehydrogena 62.7 8.7 0.0003 36.9 5.3 98 384-497 3-117 (312)
285 3dme_A Conserved exported prot 62.6 6.9 0.00024 38.1 4.6 33 383-427 4-36 (369)
286 3tzq_B Short-chain type dehydr 62.5 11 0.00037 36.5 5.9 78 379-474 7-96 (271)
287 2x4g_A Nucleoside-diphosphate- 62.5 19 0.00064 35.0 7.7 97 384-498 14-126 (342)
288 1hdc_A 3-alpha, 20 beta-hydrox 62.4 10 0.00035 36.2 5.7 37 380-427 2-38 (254)
289 3enk_A UDP-glucose 4-epimerase 62.3 9.9 0.00034 37.1 5.7 97 383-498 5-129 (341)
290 3nix_A Flavoprotein/dehydrogen 62.3 8.5 0.00029 38.8 5.3 35 383-429 5-39 (421)
291 2q7v_A Thioredoxin reductase; 62.3 6.7 0.00023 38.2 4.4 33 383-427 8-40 (325)
292 3h8l_A NADH oxidase; membrane 61.9 6.2 0.00021 40.2 4.3 36 384-428 2-37 (409)
293 2vou_A 2,6-dihydroxypyridine h 61.6 8.1 0.00028 39.2 5.1 34 382-427 4-37 (397)
294 3qvo_A NMRA family protein; st 61.6 12 0.00039 35.2 5.8 101 381-498 21-125 (236)
295 3r9u_A Thioredoxin reductase; 61.4 7.3 0.00025 37.1 4.4 33 383-427 4-37 (315)
296 2xdo_A TETX2 protein; tetracyc 61.4 6.9 0.00023 39.7 4.5 36 381-428 24-59 (398)
297 2q2v_A Beta-D-hydroxybutyrate 61.3 9.6 0.00033 36.3 5.3 37 380-427 1-37 (255)
298 3ab1_A Ferredoxin--NADP reduct 61.2 7.4 0.00025 38.5 4.6 35 382-428 13-47 (360)
299 2q0l_A TRXR, thioredoxin reduc 61.1 7.4 0.00025 37.4 4.5 33 384-427 2-34 (311)
300 1ryi_A Glycine oxidase; flavop 61.1 7.6 0.00026 38.5 4.7 35 383-429 17-51 (382)
301 3c96_A Flavin-containing monoo 61.0 7.6 0.00026 39.5 4.8 35 383-428 4-38 (410)
302 1yvv_A Amine oxidase, flavin-c 60.9 7.6 0.00026 37.7 4.6 33 384-428 3-35 (336)
303 1hxh_A 3BETA/17BETA-hydroxyste 60.8 7.7 0.00026 37.0 4.5 77 380-474 3-91 (253)
304 1y56_B Sarcosine oxidase; dehy 60.8 7.3 0.00025 38.7 4.5 34 383-428 5-38 (382)
305 1pqw_A Polyketide synthase; ro 60.6 21 0.00072 32.4 7.3 50 366-427 22-72 (198)
306 3rp8_A Flavoprotein monooxygen 60.3 7.7 0.00026 39.3 4.6 36 381-428 21-56 (407)
307 2d8a_A PH0655, probable L-thre 60.1 9.1 0.00031 38.4 5.1 48 366-426 153-200 (348)
308 3k7m_X 6-hydroxy-L-nicotine ox 60.1 7.9 0.00027 39.3 4.7 32 385-428 3-34 (431)
309 3grf_A Ornithine carbamoyltran 60.0 25 0.00084 36.6 8.4 131 321-469 96-240 (328)
310 2gf3_A MSOX, monomeric sarcosi 60.0 7.7 0.00026 38.5 4.5 34 384-429 4-37 (389)
311 3un1_A Probable oxidoreductase 59.9 29 0.001 33.3 8.5 76 381-474 26-107 (260)
312 3sxp_A ADP-L-glycero-D-mannohe 59.9 20 0.0007 35.5 7.6 108 379-498 6-138 (362)
313 2x3n_A Probable FAD-dependent 59.8 7.1 0.00024 39.4 4.2 34 383-428 6-39 (399)
314 1trb_A Thioredoxin reductase; 59.8 4.9 0.00017 38.7 3.0 34 382-427 4-37 (320)
315 3axb_A Putative oxidoreductase 59.7 8.1 0.00028 39.7 4.7 37 379-426 19-55 (448)
316 2c5a_A GDP-mannose-3', 5'-epim 59.6 32 0.0011 34.5 9.1 99 382-498 28-145 (379)
317 1tt5_A APPBP1, amyloid protein 59.6 4.6 0.00016 44.4 3.0 38 379-427 28-65 (531)
318 1np3_A Ketol-acid reductoisome 59.6 9.2 0.00032 38.9 5.1 88 381-495 14-104 (338)
319 2vdc_G Glutamate synthase [NAD 59.3 9.1 0.00031 40.6 5.1 34 382-427 121-154 (456)
320 4gbj_A 6-phosphogluconate dehy 59.2 11 0.00038 37.8 5.5 31 384-426 6-36 (297)
321 2q1s_A Putative nucleotide sug 59.2 15 0.0005 37.0 6.4 103 380-498 29-151 (377)
322 1xq6_A Unknown protein; struct 59.2 15 0.0005 33.9 5.9 101 381-498 2-133 (253)
323 4a7p_A UDP-glucose dehydrogena 59.1 33 0.0011 36.7 9.5 33 383-427 8-40 (446)
324 3cgv_A Geranylgeranyl reductas 59.1 6.4 0.00022 39.1 3.7 34 383-428 4-37 (397)
325 3tpf_A Otcase, ornithine carba 59.1 51 0.0017 33.9 10.5 133 316-471 83-222 (307)
326 3n74_A 3-ketoacyl-(acyl-carrie 59.1 8.7 0.0003 36.5 4.5 78 379-474 5-94 (261)
327 3i1j_A Oxidoreductase, short c 59.0 22 0.00074 33.3 7.2 38 379-427 10-47 (247)
328 2zcu_A Uncharacterized oxidore 59.0 8.8 0.0003 36.4 4.5 98 385-498 1-104 (286)
329 3cty_A Thioredoxin reductase; 58.9 8 0.00028 37.5 4.3 33 383-427 16-48 (319)
330 3sc6_A DTDP-4-dehydrorhamnose 58.9 7.5 0.00026 37.1 4.0 83 385-498 7-106 (287)
331 3ruf_A WBGU; rossmann fold, UD 58.7 7.7 0.00026 38.2 4.2 101 381-498 23-151 (351)
332 2gqw_A Ferredoxin reductase; f 58.7 10 0.00036 39.0 5.3 38 383-430 7-44 (408)
333 4eqs_A Coenzyme A disulfide re 58.6 8 0.00027 40.5 4.5 34 385-428 2-35 (437)
334 1zk7_A HGII, reductase, mercur 58.6 8.5 0.00029 40.2 4.7 33 383-427 4-36 (467)
335 3tpc_A Short chain alcohol deh 58.5 29 0.001 32.9 8.1 77 380-474 4-92 (257)
336 1sb8_A WBPP; epimerase, 4-epim 58.5 14 0.00046 36.6 6.0 101 381-498 25-153 (352)
337 3p19_A BFPVVD8, putative blue 58.4 15 0.00051 35.6 6.1 82 378-474 11-98 (266)
338 3dje_A Fructosyl amine: oxygen 58.0 9.1 0.00031 39.1 4.7 37 383-430 6-42 (438)
339 1zk4_A R-specific alcohol dehy 58.0 9.4 0.00032 35.7 4.5 38 379-427 2-39 (251)
340 2nu8_A Succinyl-COA ligase [AD 57.7 16 0.00055 36.6 6.4 86 383-494 7-93 (288)
341 3uuw_A Putative oxidoreductase 57.7 5.6 0.00019 39.3 3.0 91 381-495 4-95 (308)
342 3gg2_A Sugar dehydrogenase, UD 57.7 9.5 0.00033 40.7 5.0 32 384-427 3-34 (450)
343 2gag_B Heterotetrameric sarcos 57.6 9.8 0.00034 37.9 4.8 36 383-428 21-56 (405)
344 2uzz_A N-methyl-L-tryptophan o 57.6 8.3 0.00028 38.1 4.2 35 384-430 3-37 (372)
345 1k0i_A P-hydroxybenzoate hydro 57.6 10 0.00034 38.1 4.9 33 384-428 3-35 (394)
346 2wm3_A NMRA-like family domain 57.6 5.8 0.0002 38.3 3.0 99 383-499 5-115 (299)
347 1vl0_A DTDP-4-dehydrorhamnose 57.4 12 0.0004 35.9 5.1 87 381-498 10-113 (292)
348 3dfz_A SIRC, precorrin-2 dehyd 57.4 8.4 0.00029 37.8 4.2 36 380-427 28-63 (223)
349 3urh_A Dihydrolipoyl dehydroge 57.2 8.7 0.0003 40.4 4.6 34 383-428 25-58 (491)
350 3uox_A Otemo; baeyer-villiger 57.0 9.8 0.00033 41.4 5.0 35 382-428 8-42 (545)
351 4gqa_A NAD binding oxidoreduct 56.8 6.7 0.00023 40.4 3.6 109 371-493 13-129 (412)
352 2gv8_A Monooxygenase; FMO, FAD 56.7 8.4 0.00029 40.0 4.3 36 382-427 5-40 (447)
353 2cul_A Glucose-inhibited divis 56.6 10 0.00034 35.8 4.5 33 383-427 3-35 (232)
354 4hkt_A Inositol 2-dehydrogenas 56.6 7.2 0.00025 38.9 3.6 89 384-495 4-92 (331)
355 1vdc_A NTR, NADPH dependent th 56.5 7.9 0.00027 37.6 3.8 33 382-426 7-39 (333)
356 1dxl_A Dihydrolipoamide dehydr 56.2 11 0.00038 39.2 5.1 33 383-427 6-38 (470)
357 1c0p_A D-amino acid oxidase; a 56.1 11 0.00038 37.4 4.9 34 383-428 6-39 (363)
358 3cmm_A Ubiquitin-activating en 56.1 9.8 0.00033 45.2 5.1 37 380-427 24-60 (1015)
359 4ej6_A Putative zinc-binding d 56.0 24 0.00082 36.0 7.5 104 358-486 159-275 (370)
360 1o5i_A 3-oxoacyl-(acyl carrier 55.9 44 0.0015 31.7 8.9 77 379-474 15-92 (249)
361 3euw_A MYO-inositol dehydrogen 55.9 5.6 0.00019 39.9 2.7 90 384-495 5-94 (344)
362 3moi_A Probable dehydrogenase; 55.8 5.2 0.00018 41.2 2.5 89 384-494 3-92 (387)
363 2oln_A NIKD protein; flavoprot 55.8 9.7 0.00033 38.2 4.4 35 384-430 5-39 (397)
364 2r9z_A Glutathione amide reduc 55.8 9.5 0.00032 40.0 4.5 33 383-427 4-36 (463)
365 2eq6_A Pyruvate dehydrogenase 55.7 8.1 0.00028 40.5 4.0 35 382-428 5-39 (464)
366 3l4b_C TRKA K+ channel protien 55.6 9.5 0.00033 35.7 4.1 95 385-499 2-100 (218)
367 2xve_A Flavin-containing monoo 55.5 9.8 0.00033 40.1 4.6 38 384-427 3-40 (464)
368 3i3l_A Alkylhalidase CMLS; fla 55.4 13 0.00045 40.9 5.8 37 381-429 21-57 (591)
369 2o7s_A DHQ-SDH PR, bifunctiona 55.3 13 0.00046 40.2 5.7 36 380-427 361-396 (523)
370 1rkx_A CDP-glucose-4,6-dehydra 55.0 25 0.00084 34.7 7.2 102 381-498 7-132 (357)
371 3s5w_A L-ornithine 5-monooxyge 55.0 8 0.00027 39.9 3.7 39 383-429 30-69 (463)
372 3ktd_A Prephenate dehydrogenas 54.8 13 0.00046 38.4 5.4 91 384-498 9-101 (341)
373 1rpn_A GDP-mannose 4,6-dehydra 54.8 26 0.00089 34.0 7.2 105 380-498 11-138 (335)
374 1ek6_A UDP-galactose 4-epimera 54.8 11 0.00037 37.0 4.5 103 384-498 3-132 (348)
375 4ep1_A Otcase, ornithine carba 54.6 53 0.0018 34.4 9.9 131 321-473 121-257 (340)
376 3dqp_A Oxidoreductase YLBE; al 54.5 21 0.0007 32.8 6.1 94 385-498 2-106 (219)
377 1nff_A Putative oxidoreductase 54.3 23 0.00079 33.9 6.7 78 379-474 3-92 (260)
378 3k31_A Enoyl-(acyl-carrier-pro 54.3 17 0.00058 35.8 5.8 81 378-474 25-119 (296)
379 3v76_A Flavoprotein; structura 54.1 10 0.00035 39.8 4.4 35 383-429 27-61 (417)
380 3pid_A UDP-glucose 6-dehydroge 54.1 16 0.00055 39.2 6.0 44 464-513 146-189 (432)
381 4gcm_A TRXR, thioredoxin reduc 53.9 11 0.00036 36.6 4.3 32 384-427 7-38 (312)
382 1t2a_A GDP-mannose 4,6 dehydra 53.8 30 0.001 34.4 7.7 101 384-498 25-156 (375)
383 2hqm_A GR, grase, glutathione 53.7 9.5 0.00032 40.2 4.1 34 382-427 10-43 (479)
384 3db2_A Putative NADPH-dependen 53.6 8.6 0.00029 38.8 3.6 91 383-495 5-95 (354)
385 2ydy_A Methionine adenosyltran 53.6 27 0.00093 33.7 7.1 92 383-498 2-110 (315)
386 2dtx_A Glucose 1-dehydrogenase 53.5 52 0.0018 31.6 9.1 76 380-474 5-85 (264)
387 3m6i_A L-arabinitol 4-dehydrog 53.4 15 0.00052 36.9 5.5 55 360-426 158-212 (363)
388 3r1i_A Short-chain type dehydr 53.4 36 0.0012 33.1 7.9 78 379-474 28-120 (276)
389 2qae_A Lipoamide, dihydrolipoy 53.4 11 0.00038 39.3 4.5 33 383-427 2-34 (468)
390 3d6n_B Aspartate carbamoyltran 53.3 1.7E+02 0.006 29.8 13.3 127 321-473 85-215 (291)
391 2nm0_A Probable 3-oxacyl-(acyl 53.3 38 0.0013 32.4 8.1 77 379-474 17-98 (253)
392 1mo9_A ORF3; nucleotide bindin 53.3 11 0.00036 40.4 4.5 35 382-428 42-76 (523)
393 3ka7_A Oxidoreductase; structu 53.3 12 0.00041 37.8 4.6 31 385-427 2-32 (425)
394 1mv8_A GMD, GDP-mannose 6-dehy 53.2 11 0.00039 39.5 4.6 31 385-427 2-32 (436)
395 3nrn_A Uncharacterized protein 53.1 12 0.00041 38.0 4.7 32 385-428 2-33 (421)
396 4gde_A UDP-galactopyranose mut 53.0 13 0.00044 38.5 4.9 23 383-405 10-32 (513)
397 3rwb_A TPLDH, pyridoxal 4-dehy 53.0 19 0.00066 34.2 5.8 38 379-427 2-39 (247)
398 3gaf_A 7-alpha-hydroxysteroid 52.9 23 0.0008 33.8 6.4 38 379-427 8-45 (256)
399 4ap3_A Steroid monooxygenase; 52.8 10 0.00035 41.2 4.3 35 382-428 20-54 (549)
400 3op4_A 3-oxoacyl-[acyl-carrier 52.8 13 0.00044 35.5 4.6 78 379-474 5-94 (248)
401 1fl2_A Alkyl hydroperoxide red 52.8 10 0.00036 36.3 4.0 32 384-427 2-33 (310)
402 3ak4_A NADH-dependent quinucli 52.7 21 0.00072 34.0 6.0 83 380-474 9-97 (263)
403 2yqu_A 2-oxoglutarate dehydrog 52.7 11 0.00038 39.1 4.4 33 384-428 2-34 (455)
404 1zq6_A Otcase, ornithine carba 52.7 91 0.0031 32.9 11.3 116 338-472 145-274 (359)
405 4egf_A L-xylulose reductase; s 52.6 18 0.00062 34.8 5.6 77 380-474 17-109 (266)
406 1dlj_A UDP-glucose dehydrogena 52.6 13 0.00043 38.9 4.8 30 385-427 2-31 (402)
407 4dyv_A Short-chain dehydrogena 52.6 17 0.00056 35.5 5.4 77 380-474 25-113 (272)
408 2fwm_X 2,3-dihydro-2,3-dihydro 52.6 58 0.002 30.7 9.1 76 380-474 4-85 (250)
409 4hv4_A UDP-N-acetylmuramate--L 52.2 14 0.00049 39.6 5.3 107 383-525 22-130 (494)
410 3h28_A Sulfide-quinone reducta 52.2 12 0.00041 38.6 4.5 35 384-428 3-37 (430)
411 3evn_A Oxidoreductase, GFO/IDH 52.1 17 0.00057 36.4 5.5 93 382-495 4-96 (329)
412 2wpf_A Trypanothione reductase 52.0 14 0.00049 39.1 5.2 32 383-425 7-38 (495)
413 2qcu_A Aerobic glycerol-3-phos 51.9 12 0.00042 39.6 4.6 34 383-428 3-36 (501)
414 3mz0_A Inositol 2-dehydrogenas 51.7 16 0.00054 36.7 5.2 93 384-495 3-95 (344)
415 2a8x_A Dihydrolipoyl dehydroge 51.5 11 0.00036 39.4 4.0 33 383-427 3-35 (464)
416 3uko_A Alcohol dehydrogenase c 51.5 28 0.00095 35.4 7.1 44 372-426 183-226 (378)
417 3k30_A Histamine dehydrogenase 51.5 14 0.00049 41.0 5.3 34 383-428 391-424 (690)
418 3oqb_A Oxidoreductase; structu 51.3 9.5 0.00032 38.8 3.6 97 381-495 4-112 (383)
419 4a2c_A Galactitol-1-phosphate 51.3 36 0.0012 33.8 7.7 55 360-426 139-193 (346)
420 4g6h_A Rotenone-insensitive NA 51.3 6.9 0.00024 42.0 2.7 32 384-427 43-74 (502)
421 1zmd_A Dihydrolipoyl dehydroge 51.3 12 0.00041 39.1 4.4 34 383-428 6-39 (474)
422 2a87_A TRXR, TR, thioredoxin r 51.3 10 0.00034 37.3 3.6 34 382-427 13-46 (335)
423 1yb1_A 17-beta-hydroxysteroid 51.2 37 0.0013 32.5 7.6 38 379-427 27-64 (272)
424 1fmc_A 7 alpha-hydroxysteroid 51.2 18 0.00062 33.8 5.2 38 379-427 7-44 (255)
425 2p2s_A Putative oxidoreductase 51.2 23 0.00077 35.4 6.2 84 382-486 3-88 (336)
426 3fys_A Protein DEGV; fatty aci 51.1 9.4 0.00032 39.3 3.5 151 209-418 16-179 (315)
427 3ko8_A NAD-dependent epimerase 51.1 40 0.0014 32.3 7.8 94 385-498 2-113 (312)
428 3oig_A Enoyl-[acyl-carrier-pro 51.0 26 0.00088 33.3 6.3 80 379-474 3-98 (266)
429 4dry_A 3-oxoacyl-[acyl-carrier 51.0 21 0.0007 34.9 5.8 79 378-474 28-122 (281)
430 1ebd_A E3BD, dihydrolipoamide 50.9 11 0.00039 39.0 4.2 32 384-427 4-35 (455)
431 3sx6_A Sulfide-quinone reducta 50.9 13 0.00044 38.5 4.5 36 384-428 5-40 (437)
432 1q1r_A Putidaredoxin reductase 50.9 14 0.00049 38.3 4.9 37 383-429 4-40 (431)
433 1onf_A GR, grase, glutathione 50.8 12 0.00041 39.7 4.4 33 384-428 3-35 (500)
434 3f1l_A Uncharacterized oxidore 50.6 31 0.0011 32.8 6.9 38 379-427 8-45 (252)
435 1ges_A Glutathione reductase; 50.5 9.9 0.00034 39.7 3.6 33 383-427 4-36 (450)
436 2v3a_A Rubredoxin reductase; a 50.5 12 0.00041 37.8 4.2 35 383-427 4-38 (384)
437 3uog_A Alcohol dehydrogenase; 50.5 16 0.00056 36.9 5.2 44 371-426 178-221 (363)
438 2gn4_A FLAA1 protein, UDP-GLCN 50.3 15 0.00053 36.8 4.9 104 379-498 17-142 (344)
439 4a5l_A Thioredoxin reductase; 50.2 11 0.00039 36.1 3.7 32 384-427 5-36 (314)
440 3lad_A Dihydrolipoamide dehydr 50.1 15 0.00053 38.2 5.0 33 383-427 3-35 (476)
441 3ntd_A FAD-dependent pyridine 50.0 16 0.00055 38.8 5.2 36 384-429 2-37 (565)
442 3rkr_A Short chain oxidoreduct 49.9 34 0.0012 32.6 7.1 76 380-473 26-116 (262)
443 3f9i_A 3-oxoacyl-[acyl-carrier 49.8 11 0.00038 35.4 3.6 79 378-474 9-95 (249)
444 1pvv_A Otcase, ornithine carba 49.8 90 0.0031 32.2 10.6 130 321-471 97-231 (315)
445 1yqd_A Sinapyl alcohol dehydro 49.8 31 0.0011 35.0 7.1 49 366-426 171-219 (366)
446 1w4x_A Phenylacetone monooxyge 49.7 14 0.00049 39.6 4.8 35 382-428 15-49 (542)
447 3gvc_A Oxidoreductase, probabl 49.7 12 0.00043 36.5 4.0 78 379-474 25-114 (277)
448 2bgk_A Rhizome secoisolaricire 49.6 15 0.0005 35.0 4.4 38 379-427 12-49 (278)
449 3e03_A Short chain dehydrogena 49.6 48 0.0016 31.9 8.1 38 379-427 2-39 (274)
450 1lvl_A Dihydrolipoamide dehydr 49.6 14 0.00048 38.6 4.6 33 383-427 5-37 (458)
451 3o0h_A Glutathione reductase; 49.6 14 0.00049 38.8 4.7 33 383-427 26-58 (484)
452 1m6i_A Programmed cell death p 49.6 15 0.0005 39.1 4.8 38 382-429 10-47 (493)
453 3l8k_A Dihydrolipoyl dehydroge 49.5 14 0.00049 38.6 4.7 34 383-428 4-37 (466)
454 7mdh_A Protein (malate dehydro 49.4 14 0.0005 39.0 4.7 109 383-501 32-161 (375)
455 1pl8_A Human sorbitol dehydrog 49.4 20 0.00069 36.1 5.6 49 366-426 156-204 (356)
456 3rd5_A Mypaa.01249.C; ssgcid, 49.4 16 0.00055 35.5 4.7 78 380-475 13-98 (291)
457 3h7a_A Short chain dehydrogena 49.3 35 0.0012 32.5 7.1 77 380-474 4-94 (252)
458 2zb4_A Prostaglandin reductase 49.3 27 0.00093 35.0 6.5 53 364-427 140-195 (357)
459 2x6t_A ADP-L-glycero-D-manno-h 49.3 31 0.0011 34.1 6.8 102 381-498 44-163 (357)
460 2e4g_A Tryptophan halogenase; 49.3 14 0.00048 39.7 4.7 38 383-429 25-62 (550)
461 2pnf_A 3-oxoacyl-[acyl-carrier 49.3 32 0.0011 31.9 6.6 38 379-427 3-40 (248)
462 2bc0_A NADH oxidase; flavoprot 49.2 16 0.00054 38.6 4.9 37 383-428 35-71 (490)
463 2qa2_A CABE, polyketide oxygen 49.1 14 0.00048 39.4 4.6 34 382-427 11-44 (499)
464 2aqj_A Tryptophan halogenase, 49.1 14 0.00047 39.5 4.5 37 383-428 5-41 (538)
465 1gy8_A UDP-galactose 4-epimera 49.0 29 0.00098 34.7 6.6 46 453-498 82-144 (397)
466 3ihm_A Styrene monooxygenase A 49.0 13 0.00043 38.6 4.1 32 384-427 23-54 (430)
467 1fjh_A 3alpha-hydroxysteroid d 49.0 29 0.001 32.5 6.3 70 384-474 2-73 (257)
468 3m1a_A Putative dehydrogenase; 48.9 15 0.00052 35.3 4.4 76 381-474 3-90 (281)
469 3e9m_A Oxidoreductase, GFO/IDH 48.9 13 0.00045 37.2 4.1 90 382-495 4-96 (330)
470 2wsb_A Galactitol dehydrogenas 48.7 21 0.00071 33.4 5.2 38 379-427 7-44 (254)
471 2weu_A Tryptophan 5-halogenase 48.7 11 0.00038 39.6 3.7 37 384-429 3-39 (511)
472 1kyq_A Met8P, siroheme biosynt 48.5 11 0.00037 38.2 3.4 36 380-427 10-45 (274)
473 2bry_A NEDD9 interacting prote 48.5 15 0.00051 39.2 4.7 37 382-430 91-127 (497)
474 1qsg_A Enoyl-[acyl-carrier-pro 48.5 19 0.00066 34.3 5.1 78 381-474 7-98 (265)
475 2d1y_A Hypothetical protein TT 48.5 26 0.00089 33.3 6.0 79 380-474 3-88 (256)
476 2o23_A HADH2 protein; HSD17B10 48.4 28 0.00096 32.7 6.1 78 379-474 8-97 (265)
477 2qa1_A PGAE, polyketide oxygen 48.4 14 0.00048 39.4 4.5 36 380-427 8-43 (500)
478 1gee_A Glucose 1-dehydrogenase 48.3 22 0.00076 33.4 5.4 36 380-426 4-39 (261)
479 1rsg_A FMS1 protein; FAD bindi 48.2 4.7 0.00016 42.7 0.7 25 381-405 6-30 (516)
480 2jl1_A Triphenylmethane reduct 48.2 10 0.00034 36.1 3.0 98 385-498 2-107 (287)
481 3v8b_A Putative dehydrogenase, 48.2 31 0.0011 33.7 6.6 77 380-474 25-116 (283)
482 3qj4_A Renalase; FAD/NAD(P)-bi 48.0 11 0.00036 37.3 3.2 34 385-427 3-36 (342)
483 2ew2_A 2-dehydropantoate 2-red 48.0 16 0.00054 35.3 4.4 100 384-501 4-111 (316)
484 4eez_A Alcohol dehydrogenase 1 48.0 40 0.0014 33.4 7.5 47 368-426 150-196 (348)
485 3qiv_A Short-chain dehydrogena 47.9 25 0.00086 33.1 5.7 77 379-473 5-96 (253)
486 1v59_A Dihydrolipoamide dehydr 47.7 16 0.00054 38.2 4.6 34 383-428 5-38 (478)
487 3uxy_A Short-chain dehydrogena 47.6 49 0.0017 32.0 7.8 76 380-474 25-105 (266)
488 2x8r_A Glycosyl hydrolase; pep 47.6 29 0.00098 33.1 6.1 63 262-333 74-138 (210)
489 3st7_A Capsular polysaccharide 47.6 47 0.0016 33.1 7.9 79 385-498 2-94 (369)
490 4fk1_A Putative thioredoxin re 47.5 15 0.00053 35.5 4.3 34 382-427 5-38 (304)
491 3pi7_A NADH oxidoreductase; gr 47.5 63 0.0022 32.3 8.9 82 372-473 155-243 (349)
492 2hcy_A Alcohol dehydrogenase 1 47.2 34 0.0011 34.3 6.8 44 370-426 158-202 (347)
493 3rih_A Short chain dehydrogena 47.2 38 0.0013 33.4 7.1 78 379-474 37-130 (293)
494 3rc1_A Sugar 3-ketoreductase; 47.1 6.5 0.00022 40.0 1.5 93 381-495 25-118 (350)
495 3tox_A Short chain dehydrogena 46.8 28 0.00096 34.0 6.0 37 380-427 5-41 (280)
496 1s3e_A Amine oxidase [flavin-c 46.8 17 0.00057 38.4 4.7 33 383-427 4-36 (520)
497 2zat_A Dehydrogenase/reductase 46.8 48 0.0017 31.4 7.5 39 378-427 9-47 (260)
498 3fpz_A Thiazole biosynthetic e 46.7 17 0.00057 35.9 4.4 36 382-427 64-99 (326)
499 3gwf_A Cyclohexanone monooxyge 46.7 14 0.00047 40.2 4.1 35 383-428 8-42 (540)
500 1xg5_A ARPG836; short chain de 46.6 24 0.00082 33.9 5.4 36 381-427 30-65 (279)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=5.2e-197 Score=1586.51 Aligned_cols=505 Identities=54% Similarity=0.953 Sum_probs=499.0
Q ss_pred ccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHhhccCCchhHHHHHHHHHHhhHHHHHHHHhh
Q 007301 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (609)
Q Consensus 102 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~ 181 (609)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+++++++++|+||+||++||++||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCCCccccchh
Q 007301 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (609)
Q Consensus 182 ~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (609)
|++|+|||+||||||++|++||+|||+|+|+|||++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH
Q 007301 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (609)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA 341 (609)
|++|||+||||||++|||||||||||||+||+||+||||||+|++|+||++|+||||++|+++|||+++||||||+++||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcE
Q 007301 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (609)
Q Consensus 342 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 421 (609)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||+++|
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 99999999999
Q ss_pred EEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 422 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877788999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 502 SQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 502 ~~aEct~e~A~~wT~GraifASGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||+|+++++|++|||+|+++||+|||++++
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~alA~~v~ 478 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVS 478 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTCC
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 581 QENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 581 ~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
++++..+.|||++++||+||.+||.||+
T Consensus 479 ~~~~~~~~i~P~~~~ir~vs~~VA~aVa 506 (555)
T 1gq2_A 479 EENLQEGRLYPPLVTIQQVSLKIAVRIA 506 (555)
T ss_dssp HHHHHHTCSSCCGGGHHHHHHHHHHHHH
T ss_pred cccCCCCcccCCcchhhHhHHHHHHHHH
Confidence 9999999999999999999999999996
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=1.9e-196 Score=1586.03 Aligned_cols=506 Identities=52% Similarity=0.937 Sum_probs=499.5
Q ss_pred ccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHhhccCCchhHHHHHHHHHHhhHHHHHHHHhh
Q 007301 102 ASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLID 181 (609)
Q Consensus 102 ~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ll~~ 181 (609)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|+++++++++|+||+||++||++||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCCCccccchh
Q 007301 182 NVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVG 261 (609)
Q Consensus 182 ~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iG 261 (609)
|++|+|||+||||||++|++||+|||+|+|+|||++|+++|+++|+|||.++|+|||||||||||||||+|++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH
Q 007301 262 KLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA 341 (609)
Q Consensus 262 Kl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA 341 (609)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|+||++|+||||++|+++|||+++||||||+++||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcE
Q 007301 342 FDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (609)
Q Consensus 342 f~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 421 (609)
|+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+++|||+++|
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVE-NGLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHH-TTCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHH-cCCChHHhhCcE
Confidence 9999999999999999999999999999999999999999999999999999999999999999988 599999999999
Q ss_pred EEEcccCcccCCCccCCchhcchhccccCCC--CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 422 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
||||++|||+++|.++|+++|++||++.++. ++|+|||+.+|||||||+|+++|+||+||||+|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999445999999999987776 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcc
Q 007301 500 PTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQ 578 (609)
Q Consensus 500 Pt~~aEct~e~A~~wT~GraifASGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~ 578 (609)
||+++||+||||++||+|+|||||||||+||+| +||+|+|||+||+|+|||||+|+++++|++|||+|+++||+|||++
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~aLA~~ 481 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQ 481 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHHHHHTT
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 579 VTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 579 v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
++++++..+.|||+++++|+||.+||.||+
T Consensus 482 v~~~~~~~~~i~P~~~~~r~vs~~VA~aVa 511 (564)
T 1pj3_A 482 LTDEELAQGRLYPPLANIQEVSINIAIKVT 511 (564)
T ss_dssp CCHHHHHTTCSSCCGGGHHHHHHHHHHHHH
T ss_pred cccccCCCCcccCCcchhhHhHHHHHHHHH
Confidence 999999999999999999999999999996
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=2.1e-196 Score=1590.01 Aligned_cols=509 Identities=48% Similarity=0.860 Sum_probs=501.8
Q ss_pred ccccccccccccCcCCccCCCCCHHHHhccccCCCCCCcccCHHHHHHHHHHHhhccCCchhHHHHHHHHHHhhHHHHHH
Q 007301 98 SVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYK 177 (609)
Q Consensus 98 ~~~~~~G~~lL~~p~~NKG~aFt~~ER~~l~L~GLLPp~v~t~e~Q~~R~~~~~~~~~~~l~Ky~~L~~L~~~Ne~LFy~ 177 (609)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.+|++++++|+||+||++||++||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCc--chHHHHHhcCCCCCceEEEEecCcccccCCCCCCCc
Q 007301 178 LLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHG 255 (609)
Q Consensus 178 ll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~--g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~G 255 (609)
++++|++|+|||+||||||++|++||+|||+|+|+|||++|+ |+|+++++|||.++|+|||||||||||||||||++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeec
Q 007301 256 MGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFED 335 (609)
Q Consensus 256 mgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfED 335 (609)
|||||||++|||+||||||++|||||||||||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHcCCCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHh
Q 007301 336 FANHNAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLE 415 (609)
Q Consensus 336 f~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~e 415 (609)
|+++|||+||+|||++||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+.+|++ +|+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~-~Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQN-EGISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHT-TTCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHH-cCCChh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 599999
Q ss_pred hhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 416 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 416 eAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
||+++|||||++|||+++|. +|+++|++||++.++.++|+|||+.+|||||||+|+++|+||+|||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877788999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007301 496 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 575 (609)
Q Consensus 496 aLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aL 575 (609)
||||||+++|||||||++||+|+|||||||||+||+|+||+++|||+||+|||||||+|+++++|++|||+|+++||+||
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~aL 510 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKV 510 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcccCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 576 AGQVTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 576 A~~v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
|++++++++..+.|||++++||+||.+||.||+
T Consensus 511 A~~v~~~~~~~~~i~P~~~dir~vs~~VA~AVa 543 (605)
T 1o0s_A 511 ASCVTEDSLKVGRVYPQLKEIREISIQIAVEMA 543 (605)
T ss_dssp HHTCCHHHHTTTCCSCCGGGHHHHHHHHHHHHH
T ss_pred HhhcccccCCCCcccCCcchhhHhHHHHHHHHH
Confidence 999999999999999999999999999999996
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=3.3e-116 Score=939.77 Aligned_cols=353 Identities=30% Similarity=0.432 Sum_probs=320.4
Q ss_pred ccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCC-Cccccchhhh
Q 007301 185 ELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC-HGMGIPVGKL 263 (609)
Q Consensus 185 e~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI~iGKl 263 (609)
+.||++||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +||||||||+
T Consensus 59 ~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpImeGKl 121 (487)
T 3nv9_A 59 NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGVMEGKA 121 (487)
T ss_dssp GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHHHHHHH
T ss_pred HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCchhhhHH
Confidence 5599999999999999985 4677888777666 58999999999999999999 5999999999
Q ss_pred hHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHH
Q 007301 264 SLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD 343 (609)
Q Consensus 264 ~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~ 343 (609)
+|||+||||| |||||||+||+| +++|| ++|+ |||+++.++||. ||||||+++|||+
T Consensus 122 ~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------defv-e~v~~~~P~fG~---InlEDf~ap~af~ 177 (487)
T 3nv9_A 122 LLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAVI-EFVQRIQHTFGA---INLEDISQPNCYK 177 (487)
T ss_dssp HHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHHH-HHHHHHGGGCSE---EEECSCCTTHHHH
T ss_pred HHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHHH-HHHHHhCCCCCe---ecHhhcCCchHHH
Confidence 9999999999 999999999765 45664 3433 466666666665 9999999999999
Q ss_pred HHHHHcC--CCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcE
Q 007301 344 LLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (609)
Q Consensus 344 lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 421 (609)
||+|||+ +||||||||||||+|+|||||||+|++|++|+||||||+|||+||+|||+||+. .|+++ ++|
T Consensus 178 il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~----~~i 248 (487)
T 3nv9_A 178 ILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP----KKI 248 (487)
T ss_dssp HHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG----GGE
T ss_pred HHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc----ccE
Confidence 9999998 799999999999999999999999999999999999999999999999999975 49985 899
Q ss_pred EEEcccCcccCCCccCCc-----hhcchhcccc--CCCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHccCCCcE
Q 007301 422 WLVDSKGLIVSSRLESLQ-----HFKKPWAHEH--EPVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPI 493 (609)
Q Consensus 422 ~lvDs~GLi~~~R~~~L~-----~~k~~fA~~~--~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPI 493 (609)
||||++|||+++|.+ |. ++|.+||++. ++..+|+|||+. +|||||+|++ +|+||+|+|++|+ +|||
T Consensus 249 ~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma---~~PI 322 (487)
T 3nv9_A 249 VMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG---EKPI 322 (487)
T ss_dssp EEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC---SSCE
T ss_pred EEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc---CCCE
Confidence 999999999999964 63 4567788764 356799999998 7999999976 7999999999997 8999
Q ss_pred EEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007301 494 IFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAE 573 (609)
Q Consensus 494 IFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~ 573 (609)
|||||||| +||+|||||+ +|+|||||| ++++|||+||+|+|||||+|++++||++|||+|+++||+
T Consensus 323 IFaLSNPt--pEi~pe~A~~--~G~aIvATG----------rsd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~~AAA~ 388 (487)
T 3nv9_A 323 VFCCANPV--PEIYPYEAKE--AGAYIVATG----------RGDFPNQVNNSVGFPGILKGALIVRARKITDNMAIAASR 388 (487)
T ss_dssp EEECCSSS--CSSCHHHHHH--TTCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred EEECCCCC--ccCCHHHHHH--hCCEEEEEC----------CCCCcccCcceeEcchhhHHHHHcCCcccCHHHHHHHHH
Confidence 99999999 7999999998 599999999 467899999999999999999999999999999999999
Q ss_pred HHHcccCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 574 ALAGQVTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 574 aLA~~v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
+||++++++++.++.|||++++. +||.+||.||+
T Consensus 389 ALA~~v~~~~l~~~~i~P~~~d~-~Vs~~VA~AVa 422 (487)
T 3nv9_A 389 ALAEFAEKRGINPDNIIGTMDEP-GIFPKEAADVA 422 (487)
T ss_dssp HHHHHHHHTCCBTTBCSCCTTCT-THHHHHHHHHH
T ss_pred HHHhhCCcccCCCCceeCCcccc-chHHHHHHHHH
Confidence 99999999999999999999995 79999999996
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=7.7e-111 Score=887.91 Aligned_cols=354 Identities=29% Similarity=0.424 Sum_probs=327.9
Q ss_pred HHHHHHhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCC
Q 007301 174 LFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGC 253 (609)
Q Consensus 174 LFy~ll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~ 253 (609)
+++++.+++. |+|||+||||||++|++|+ + |+++++ +|+.++++|+|||||+|||||||+|+
T Consensus 24 ~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~----------~p~~v~----~~t~~~~~V~VvTdG~~iLGLGD~G~ 85 (398)
T 2a9f_A 24 VQPKVDIKTK-HDLSIAYTPGVASVSSAIA---K----------DKTLAY----DLTTKKNTVAVISDGTAVLGLGDIGP 85 (398)
T ss_dssp EEESSCCSSH-HHHHHHSTTTTHHHHHHHH---H----------CGGGHH----HHSGGGTEEEEEECSSSCTTSCCCCH
T ss_pred EEEecccCCH-HHCeEEECchHHHHHHHHH---h----------CHHHHH----HhcccCCEEEEEECCccccCCCCccc
Confidence 3445566665 5589999999999999986 3 445555 78999999999999999999999999
Q ss_pred C-ccccchhhhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-cee
Q 007301 254 H-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILI 331 (609)
Q Consensus 254 ~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~-~lI 331 (609)
+ |||||+||+.||++||||| |+|||||||| +||||++|++.| |. ..|
T Consensus 86 ~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~I 134 (398)
T 2a9f_A 86 EAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGGI 134 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSEE
T ss_pred ccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeEe
Confidence 8 9999999999999999999 9999999996 799999999999 88 899
Q ss_pred eeecCCCCcHHHHHHHHcCC--CeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007301 332 QFEDFANHNAFDLLEKYGTT--HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (609)
Q Consensus 332 qfEDf~~~nAf~lL~ryr~~--~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~ 409 (609)
|||||+++|||++|+|||++ +|||||||||||+|++||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 135 ~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~---- 210 (398)
T 2a9f_A 135 NLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA---- 210 (398)
T ss_dssp EECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH----
T ss_pred ccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc----
Confidence 99999999999999999985 999999999999999999999999999999999999999999999999999875
Q ss_pred cCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHH
Q 007301 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMA 486 (609)
Q Consensus 410 ~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma 486 (609)
|+ ++||++|++|||+++|.++|+++|++||++... ..+|+|+|+. +|||||+|+ +|+||+|+|++|+
T Consensus 211 -Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~Ma 280 (398)
T 2a9f_A 211 -GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKMA 280 (398)
T ss_dssp -TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTSC
T ss_pred -CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhhC
Confidence 74 899999999999999943599999999987443 4689999998 899999999 8999999999998
Q ss_pred ccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHH
Q 007301 487 SLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDD 566 (609)
Q Consensus 487 ~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~ 566 (609)
++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++++||++|||+
T Consensus 281 ---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d~ 343 (398)
T 2a9f_A 281 ---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITVE 343 (398)
T ss_dssp ---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCHH
T ss_pred ---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCHH
Confidence 999999999999 89999999999 99999999 68999999999999999999999999999999
Q ss_pred HHHHHHHHHHcccCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 567 MLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 567 M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
|+++||++||++++++++.++.|||++++ |+||.+||.||+
T Consensus 344 m~~aAa~alA~~~~~~~~~~~~i~P~~~~-~~v~~~VA~aVa 384 (398)
T 2a9f_A 344 MQIAAAKGIASLVPDDALSTTNIIPDAFK-EGVAEIVAKSVR 384 (398)
T ss_dssp HHHHHHHHHHHTCSSCSSCCSCCSCSSTT-HHHHHHHTTTTC
T ss_pred HHHHHHHHHHhcCCcccCCCCccCCCCCc-chhHHHHHHHHH
Confidence 99999999999999999999999999999 999999999997
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=7.2e-106 Score=848.51 Aligned_cols=351 Identities=28% Similarity=0.427 Sum_probs=327.7
Q ss_pred HHHHHHHhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCC
Q 007301 173 KLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLG 252 (609)
Q Consensus 173 ~LFy~ll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG 252 (609)
..++++.+++.|+ |||+||||||++|++|+ ++| ++++ +|+.++++|+|||||+|||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p----------~~v~----~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDP----------EKTY----VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCG----------GGHH----HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCH----------HHHH----hhcccCCeEEEEECCccccCCCccc
Confidence 3456677777766 89999999999999986 455 4444 7999999999999999999999999
Q ss_pred CC-ccccchhhhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-ce
Q 007301 253 CH-GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-IL 330 (609)
Q Consensus 253 ~~-GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~-~l 330 (609)
++ |||||+||+.||++||||| |+|||||||| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999999 87 88
Q ss_pred eeeecCCCCcHHHHHHHHcC--CCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007301 331 IQFEDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (609)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~ 408 (609)
||||||+++|||++|+|||+ +||||||||||||+|++||+++|+|++|++++|+||||+|||+||+++|++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999998 5999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCCHhhhcCcEEEEcccCcccCCCccC-CchhcchhccccCC---CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHH
Q 007301 409 QTNMPLEETRKKIWLVDSKGLIVSSRLES-LQHFKKPWAHEHEP---VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEA 484 (609)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~GLi~~~R~~~-L~~~k~~fA~~~~~---~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~ 484 (609)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|+. +|+|||+|+ +|+||+|+|+.
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999644 99999999987443 4689999998 899999999 79999999999
Q ss_pred HHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccC
Q 007301 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVH 564 (609)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~It 564 (609)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||+|++++||+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 98 899999999999 89999999999 99999999 689999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHcccCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 565 DDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 565 d~M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
|+|+++||++||+++ ++.++.|||++++ |+||.+||.||+
T Consensus 346 ~~m~~aAa~alA~~~---~~~~~~i~P~~~~-~~v~~~vA~aVa 385 (388)
T 1vl6_A 346 KNMLLSAVEAIARSC---EPEPERIIPEAFD-MKVHLNVYTAVK 385 (388)
T ss_dssp HHHHHHHHHHHHHTS---CCBTTBSSCCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh---ccCCCcccCCCCc-chhhHHHHHHHH
Confidence 999999999999999 7788999999999 999999999996
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=5.6e-80 Score=661.07 Aligned_cols=351 Identities=32% Similarity=0.480 Sum_probs=318.1
Q ss_pred HHHHhhcccccCCcccchhhHHHHHHHhhhhcCCCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCCC-
Q 007301 176 YKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH- 254 (609)
Q Consensus 176 y~ll~~~~ee~lPivYTPtVg~aC~~~s~i~r~p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~- 254 (609)
+++.+++. |+|||+||||||++|++|++ |++++++ ||.++++|+|||||+|||||||+|.+
T Consensus 24 ~~~~~~~~-~~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG~hS 85 (439)
T 2dvm_A 24 PKVSLESR-EELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIGPLA 85 (439)
T ss_dssp ESSCCCSH-HHHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCCHHH
T ss_pred EeeccCCH-HHCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEecccceeccc
Confidence 34445555 45899999999999999973 7777774 88899999999999999999999997
Q ss_pred ccccchhhhhHHhhhCCCCCCceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCC-ceeee
Q 007301 255 GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGER-ILIQF 333 (609)
Q Consensus 255 GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~-~lIqf 333 (609)
++|+++||+.||++||||| ++|++||+. | .|||+++|+..| |+ ..|||
T Consensus 86 ~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~Ginv 134 (439)
T 2dvm_A 86 GLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGGINL 134 (439)
T ss_dssp HHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSEEEE
T ss_pred cCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcEEEE
Confidence 7999999999999999999 999999992 1 588888888766 55 67999
Q ss_pred ecCCCCcHHHHHHHHcC--CCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcC
Q 007301 334 EDFANHNAFDLLEKYGT--THLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (609)
Q Consensus 334 EDf~~~nAf~lL~ryr~--~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G 411 (609)
|||..|+||++|++|++ ++||||||+||||.+.++|+++|++..|++++++|+||+|||+||.+|+.+|... |
T Consensus 135 ED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~-----G 209 (439)
T 2dvm_A 135 EDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA-----G 209 (439)
T ss_dssp CSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT-----T
T ss_pred EeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc-----C
Confidence 99999999999999987 6999999999999999999999999999999999999999999999999999863 8
Q ss_pred CCHhhhcCcEEEEc----ccCcccCCCccC---CchhcchhccccC---CCCCHHHHHhccCCcEEEEccCCC-CCCCHH
Q 007301 412 MPLEETRKKIWLVD----SKGLIVSSRLES---LQHFKKPWAHEHE---PVKELVDAVNAIKPTILIGTSGQG-RTFTKE 480 (609)
Q Consensus 412 ~s~eeAr~~i~lvD----s~GLi~~~R~~~---L~~~k~~fA~~~~---~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~e 480 (609)
++ +++||++| ++||+++. +. |.+++++|++... ...+|.|+++. +|+|||+|+.+ |+|+++
T Consensus 210 ~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~~~e 281 (439)
T 2dvm_A 210 VK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVIKPQ 281 (439)
T ss_dssp CC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSSCHH
T ss_pred CC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCCChH
Confidence 75 37999999 99999887 24 7888889987533 25689999987 89999999985 899999
Q ss_pred HHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCC
Q 007301 481 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGA 560 (609)
Q Consensus 481 vv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a 560 (609)
+++.|+ ++||||+|+||+ +||++++|++| |++++||| +.+.|+|+||+|+|||||+|+++++|
T Consensus 282 ~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~~~a 344 (439)
T 2dvm_A 282 WIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALDVRA 344 (439)
T ss_dssp HHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHHTTC
T ss_pred HHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHhcCC
Confidence 999886 899999999999 89999999999 89999999 68999999999999999999999999
Q ss_pred cccCHHHHHHHHHHHHcccCcCCCCCCcccCCCCChhhHHHHHHhhhc
Q 007301 561 IRVHDDMLLAAAEALAGQVTQENFDKGLLYPPFKNIRKISAHIANQHG 608 (609)
Q Consensus 561 ~~Itd~M~laAA~aLA~~v~~e~~~~g~l~P~~~~ir~vS~~VA~av~ 608 (609)
++|||+|+++||++||++++++ ..+.|||++++ |+||.+||.||+
T Consensus 345 ~~i~~~m~~aaa~ala~~~~~~--~~~~i~P~~~~-~~v~~~va~av~ 389 (439)
T 2dvm_A 345 RTITDSMIIAAAKAIASIVEEP--SEENIIPSPLN-PIVYAREARAVA 389 (439)
T ss_dssp SCCCHHHHHHHHHHHHHTSSSC--BTTBCSCCTTC-HHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCccc--cCCccCCCccc-chhhHHHHHHHH
Confidence 9999999999999999999876 78999999999 999999999996
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.87 E-value=1.9e-08 Score=108.38 Aligned_cols=170 Identities=12% Similarity=0.201 Sum_probs=125.5
Q ss_pred cCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHHHH---------------------HHHc-------CCCee
Q 007301 303 KRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLL---------------------EKYG-------TTHLV 354 (609)
Q Consensus 303 ~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~lL---------------------~ryr-------~~~~~ 354 (609)
|-.+-|||...++..+.+ ..++|+.++ |-+..=...+- .||+ -.+|+
T Consensus 110 ~g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pv 184 (435)
T 3gvp_A 110 KGESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPA 184 (435)
T ss_dssp TTCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCE
T ss_pred cCCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCE
Confidence 344678888888876542 346677665 44433222221 3443 26999
Q ss_pred e----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEE
Q 007301 355 F----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLV 424 (609)
Q Consensus 355 F----------NDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lv 424 (609)
| .|++.||+-++++|+..+ ++..|.+.+++|+|+|..|.++|+.+.. .|+ +++.+
T Consensus 185 i~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra-----~Ga-------~Viv~ 249 (435)
T 3gvp_A 185 MNVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKA-----MGS-------IVYVT 249 (435)
T ss_dssp EECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEE
T ss_pred EEecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHH-----CCC-------EEEEE
Confidence 9 899999999999999755 7899999999999999999999998864 364 58888
Q ss_pred cccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCC
Q 007301 425 DSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 503 (609)
Q Consensus 425 Ds~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 503 (609)
|.+.. +...|. ..-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++.
T Consensus 250 D~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~-- 310 (435)
T 3gvp_A 250 EIDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN-- 310 (435)
T ss_dssp CSCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--
T ss_pred eCChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--
Confidence 87421 111121 11123579999986 99999999888999999999997 789999999986
Q ss_pred CCCCHHHH
Q 007301 504 SECTAEEA 511 (609)
Q Consensus 504 aEct~e~A 511 (609)
.|+..+..
T Consensus 311 ~EId~~~L 318 (435)
T 3gvp_A 311 TEIDVASL 318 (435)
T ss_dssp TTBTGGGG
T ss_pred ccCCHHHH
Confidence 78887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.80 E-value=1.9e-08 Score=108.32 Aligned_cols=130 Identities=18% Similarity=0.208 Sum_probs=105.3
Q ss_pred CCCeee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcC
Q 007301 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (609)
Q Consensus 350 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 419 (609)
-.+|+| .|++.||+-++++|++ |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~---ratg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK---RATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHH---HhcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 479999 8899999999999996 4569999999999999999999999988653 63
Q ss_pred cEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 420 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+++++|.+. .+...|. ......+|.|+++. .|++|.+++..++++++.++.|. +..||+-.|
T Consensus 236 ~Viv~D~~p------------~~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDP------------INALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCH------------HHHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCCh------------hhhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 588888742 1111111 11223589999986 99999988888999999999997 889999999
Q ss_pred CCCCCCCCCHHHHhc
Q 007301 499 NPTSQSECTAEEAYT 513 (609)
Q Consensus 499 NPt~~aEct~e~A~~ 513 (609)
++. .|+.++...+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 987 8999987754
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.21 E-value=8.7e-07 Score=93.78 Aligned_cols=218 Identities=18% Similarity=0.250 Sum_probs=129.6
Q ss_pred CcchHHHHHhcCCCCCceEEEEecCcccccCCCCCCC--ccccchhhhhHHhhhCCCCCCceeeEEeecCCCccccccCc
Q 007301 218 DKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLDDE 295 (609)
Q Consensus 218 d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnNe~LL~Dp 295 (609)
++..++++.++ ..+|+|.++++..+|++|.+.. |..|..+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~~----G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLKL----GFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHHC----CCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 44566666654 3689999999999999999875 8888888 66765 2 56776643 1
Q ss_pred ccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCC-CCcHHHHHHHHc-CCCeeee-cCC------c----ch
Q 007301 296 FYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFA-NHNAFDLLEKYG-TTHLVFN-DDI------Q----GT 362 (609)
Q Consensus 296 ~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~-~~nAf~lL~ryr-~~~~~FN-DDi------Q----GT 362 (609)
..|.++.+++ ...+|.|=..+ ++. ++++.+ ..+.+|+ |.+ | .+
T Consensus 83 ------------------~~~~i~~l~~---~~~li~~~~~~~d~~---~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~ 138 (401)
T 1x13_A 83 ------------------LDDEIALLNP---GTTLVSFIWPAQNPE---LMQKLAERNVTVMAMDSVPRISRAQSLDALS 138 (401)
T ss_dssp ------------------CHHHHTTCCT---TCEEEECCCGGGCHH---HHHHHHHTTCEEEEGGGCCCSGGGGGGCHHH
T ss_pred ------------------CHHHHHHhcC---CCcEEEEecCCCCHH---HHHHHHHCCCEEEEeehhhhhhhhcccchHH
Confidence 1233333322 11222222221 222 333432 4677773 222 2 45
Q ss_pred HHHHHHHHHHHHHHh----CC----------CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 363 ASVVLAGLISAMKFL----GG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 363 aaV~LAgll~Alr~~----g~----------~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
....+|| .+|++.. ++ .+...+|+|+|+|.+|..+++.+.. .|. +++++|++.
T Consensus 139 ~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~v~D~~~ 205 (401)
T 1x13_A 139 SMANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANS-----LGA-------IVRAFDTRP 205 (401)
T ss_dssp HHHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCG
T ss_pred HHHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH
Confidence 5556665 3343332 22 2568999999999999999987754 362 588899864
Q ss_pred cccCCCccCCch------------hcchhccccCC------CCCHHHHHhccCCcEEEEccCCC-----CCCCHHHHHHH
Q 007301 429 LIVSSRLESLQH------------FKKPWAHEHEP------VKELVDAVNAIKPTILIGTSGQG-----RTFTKEVVEAM 485 (609)
Q Consensus 429 Li~~~R~~~L~~------------~k~~fA~~~~~------~~~L~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~M 485 (609)
-..... ..+.. .+..|++...+ ..+|.+.++. .|++|++...+ .+++++.++.|
T Consensus 206 ~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~m 282 (401)
T 1x13_A 206 EVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSM 282 (401)
T ss_dssp GGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTS
T ss_pred HHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcC
Confidence 321100 00100 00012111000 0147788876 99999996443 67999999999
Q ss_pred HccCCCcEEEecCCCC
Q 007301 486 ASLNEKPIIFSLSNPT 501 (609)
Q Consensus 486 a~~~erPIIFaLSNPt 501 (609)
. +..+|+-+|+|.
T Consensus 283 k---~g~vIVdva~~~ 295 (401)
T 1x13_A 283 K---AGSVIVDLAAQN 295 (401)
T ss_dssp C---TTCEEEETTGGG
T ss_pred C---CCcEEEEEcCCC
Confidence 6 788999999873
No 11
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.81 E-value=8.2e-05 Score=80.79 Aligned_cols=128 Identities=17% Similarity=0.194 Sum_probs=97.4
Q ss_pred CCCeee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcC
Q 007301 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (609)
Q Consensus 350 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 419 (609)
-.+|+| .|+..||+-.++.|+. |.++..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 5677999999888885 6679999999999999999999999888542 64
Q ss_pred cEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 420 KIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+++++|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888876311 111111 11123579999986 99999998888999999999997 788888888
Q ss_pred CCCCCCCCCHHHH
Q 007301 499 NPTSQSECTAEEA 511 (609)
Q Consensus 499 NPt~~aEct~e~A 511 (609)
... .|+..+..
T Consensus 335 Rgd--vEID~~aL 345 (464)
T 3n58_A 335 HFD--NEIQVAAL 345 (464)
T ss_dssp SST--TTBTCGGG
T ss_pred CCC--cccCHHHH
Confidence 866 55555433
No 12
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.66 E-value=8.8e-05 Score=81.07 Aligned_cols=132 Identities=17% Similarity=0.220 Sum_probs=100.0
Q ss_pred CCCeee----------ecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcC
Q 007301 350 TTHLVF----------NDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (609)
Q Consensus 350 ~~~~~F----------NDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 419 (609)
-.+|+| .|+..||+-.++.|+. |.++..|.+.+++|.|+|..|.++|+.+.. .|.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa-----~GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQ-----AGA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHH-----CCC-------
Confidence 379999 6889999999999886 788999999999999999888888887765 363
Q ss_pred cEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 420 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+++++|.+.. + .... +...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 1000 1111123456676665 89999999888999999999886 7889999998
Q ss_pred CCCCCCCCHHHHhcc
Q 007301 500 PTSQSECTAEEAYTW 514 (609)
Q Consensus 500 Pt~~aEct~e~A~~w 514 (609)
+. .|...++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 84 78887766555
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.04 E-value=0.0023 Score=66.83 Aligned_cols=225 Identities=15% Similarity=0.141 Sum_probs=119.5
Q ss_pred cchHHHHHhcCCCCCceEEEEecCcccccCCCCCCC--ccccchhhhhHHhhhCCCCCCceeeEEeecCCC-----cccc
Q 007301 219 KGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCH--GMGIPVGKLSLYTALGGIRPSACLPVTIDVGTN-----NEKL 291 (609)
Q Consensus 219 ~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTn-----Ne~L 291 (609)
+..++++.+. +.+|+|.++++...|+.|.... |..|..++-.++ ++. +|+|.+.+- +++.
T Consensus 20 P~~v~~L~~~----G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~a------diil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVGL----GFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQA------DVVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHHT----TCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSC------SEEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHhC----CCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCC------CEEEEecCcccccCCHHH
Confidence 4455555543 5789999999999999998764 777877766665 333 466666542 1111
Q ss_pred ---c-cCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeeecCCcchHHHHH
Q 007301 292 ---L-DDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDIQGTASVVL 367 (609)
Q Consensus 292 ---L-~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQGTaaV~L 367 (609)
| ..-.+++.-+.- ++. +.++++.+ -|- .++.+|-.....+- ..+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~~-------~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISRA-------QSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGGG-------GGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEeccccccccc-------cccchhh------HHHHH
Confidence 1 112222222221 110 11222222 111 12222222110000 0111111 11122
Q ss_pred H---HHHHHHHHhCC----------CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCC
Q 007301 368 A---GLISAMKFLGG----------SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (609)
Q Consensus 368 A---gll~Alr~~g~----------~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R 434 (609)
| +++.+.+..++ .+...|++|+|+|.+|.++++.+.. .|. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~-----~Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKR-----LGA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCCHH----H
Confidence 3 45556665443 6789999999999999999887654 363 4889997532 1
Q ss_pred ccCCchhcc-----------------hhccccC------CCCCHHHHHhccCCcEEEEcc---C--CCCCCCHHHHHHHH
Q 007301 435 LESLQHFKK-----------------PWAHEHE------PVKELVDAVNAIKPTILIGTS---G--QGRTFTKEVVEAMA 486 (609)
Q Consensus 435 ~~~L~~~k~-----------------~fA~~~~------~~~~L~e~V~~vkPtvLIG~S---~--~~g~Ft~evv~~Ma 486 (609)
.+.+..+.. .|++... ....|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 110101000 1111100 00127777775 99999988 3 23578999999996
Q ss_pred ccCCCcEEEecCCC
Q 007301 487 SLNEKPIIFSLSNP 500 (609)
Q Consensus 487 ~~~erPIIFaLSNP 500 (609)
+..+|+-++-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67899988864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.99 E-value=0.00096 Score=71.42 Aligned_cols=110 Identities=16% Similarity=0.192 Sum_probs=72.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc--------------hhcchh
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ--------------HFKKPW 445 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~--------------~~k~~f 445 (609)
.+...|++|+|+|.+|..+|+.+... |. +++++|.+.-......+ +. +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999987643 63 68899987532111100 10 001124
Q ss_pred ccccCC------CCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCcEEEecCC-CCCCCCCC
Q 007301 446 AHEHEP------VKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECT 507 (609)
Q Consensus 446 A~~~~~------~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct 507 (609)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +..+|+-+|- |-...|+|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2478999987 9999998533 4589999999997 8899999995 33445554
No 15
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.69 E-value=0.021 Score=61.59 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=126.6
Q ss_pred CCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHH-H-HHHHHc---CCC--eee----------ecCCcchHHHH
Q 007301 304 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF-D-LLEKYG---TTH--LVF----------NDDIQGTASVV 366 (609)
Q Consensus 304 R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf-~-lL~ryr---~~~--~~F----------NDDiQGTaaV~ 366 (609)
..+..|-..|...|++++.+.-||+.-|-=+|++..-.. . +.+.|+ ... .++ .|--.-||-=+
T Consensus 125 ~~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv 204 (424)
T 3k92_A 125 TMSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGV 204 (424)
T ss_dssp GSCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHH
Confidence 345567778899999999999999888888999863221 1 445663 211 122 23345688888
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch-----h
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-----F 441 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~-----~ 441 (609)
..++-.+++..|.+|++.||+|.|.|..|...|+++.+. |. |-+.+.|++|-|+...+ |+. +
T Consensus 205 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~G--lD~~~l~~~ 271 (424)
T 3k92_A 205 TICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPDG--LDIPYLLDK 271 (424)
T ss_dssp HHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCCC--CCHHHHHHH
Confidence 888999999999999999999999999999999998764 63 45679999999987642 332 2
Q ss_pred cchhcc----ccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 442 KKPWAH----EHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 442 k~~fA~----~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
+..+-+ +.+.+ +-.+ +-.++.||||=+... +..|++-++.+ .-.+|.--+| |+
T Consensus 272 ~~~~g~i~~~~a~~~-~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 272 RDSFGMVTNLFTDVI-TNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CCSSSCCGGGCSCCB-CHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHHhCCCCCCCcEEe-cCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 221110 01111 2233 445789999987774 79999988876 5688888888 65
No 16
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.58 E-value=0.0026 Score=67.55 Aligned_cols=100 Identities=22% Similarity=0.200 Sum_probs=67.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh-------------cchhcc
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-------------KKPWAH 447 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~-------------k~~fA~ 447 (609)
+...|++|+|+|.+|..+|+.+... |. +++++|++.- |.+.+... ...|++
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~----~l~~~~~lGa~~~~l~~~~~~~~gya~ 245 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPE----VAEQVRSVGAQWLDLGIDAAGEGGYAR 245 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGG----GHHHHHHTTCEECCCC-----------
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----HHHHHHHcCCeEEeccccccccccchh
Confidence 5789999999999999999988653 63 5889998632 11101110 011221
Q ss_pred cc------CCCCCHHHHHhccCCcEEEEccCC-----CCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 448 EH------EPVKELVDAVNAIKPTILIGTSGQ-----GRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 448 ~~------~~~~~L~e~V~~vkPtvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.. ....+|.|+++. .|++|++... +.+||+++++.|. +..+|+-+|=+.
T Consensus 246 ~~~~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d~ 305 (381)
T 3p2y_A 246 ELSEAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGET 305 (381)
T ss_dssp --CHHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGGG
T ss_pred hhhHHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCCC
Confidence 10 112468899986 9999997533 3579999999997 788999998543
No 17
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.45 E-value=0.0088 Score=59.92 Aligned_cols=122 Identities=14% Similarity=0.175 Sum_probs=80.8
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~ 440 (609)
.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+.. .|+ +++.+|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAA-----LGA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHH
Confidence 34455555565566777889999999999999999999998754 263 688888742 11 111
Q ss_pred hcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC-CCCCCCCCCHHHH
Q 007301 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPTSQSECTAEEA 511 (609)
Q Consensus 441 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~aEct~e~A 511 (609)
.+..-++ .....+|.|+++. .|++|-.. ..+.++++.++.|. +..+|+=+| +|. ++..+.|
T Consensus 194 ~~~~g~~-~~~~~~l~~~l~~--aDvVi~~~-p~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a 255 (293)
T 3d4o_A 194 IAEMGME-PFHISKAAQELRD--VDVCINTI-PALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYA 255 (293)
T ss_dssp HHHTTSE-EEEGGGHHHHTTT--CSEEEECC-SSCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHH
T ss_pred HHHCCCe-ecChhhHHHHhcC--CCEEEECC-ChHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHH
Confidence 1000000 0012468888875 99999765 45799999998885 667888888 443 3445444
No 18
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.29 E-value=0.045 Score=58.87 Aligned_cols=186 Identities=15% Similarity=0.141 Sum_probs=126.6
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH--HHHHHHHc---CCC--eee----------ecCCcchHHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TTH--LVF----------NDDIQGTASVVL 367 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr---~~~--~~F----------NDDiQGTaaV~L 367 (609)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 4556778889999999999999999999999987522 12445552 111 122 233345777777
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEE-EEcccCcccCCCccCCchhcc-hh
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHFKK-PW 445 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvDs~GLi~~~R~~~L~~~k~-~f 445 (609)
-++-.+++..|.+|++.||+|.|.|..|...|+++.+ .|. +++ +.|++|-|+...+ |+..+. .+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~-----~Ga-------kVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAER-----LGM-------RVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 7888889999999999999999999999999988865 363 555 9999999987643 322211 11
Q ss_pred ccccCCCC----CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CCCCCCCCHHHHhc
Q 007301 446 AHEHEPVK----ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEEAYT 513 (609)
Q Consensus 446 A~~~~~~~----~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct~e~A~~ 513 (609)
......+. +-.| +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111000 0012 34578999998765 679999988877 5679999998 653 33 344444
No 19
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.14 E-value=0.2 Score=54.35 Aligned_cols=183 Identities=15% Similarity=0.100 Sum_probs=125.7
Q ss_pred CCchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCc-----HHHHHHHHcCCC-eee----------ecCCcchHHHHH
Q 007301 304 RAIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN-----AFDLLEKYGTTH-LVF----------NDDIQGTASVVL 367 (609)
Q Consensus 304 R~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~n-----Af~lL~ryr~~~-~~F----------NDDiQGTaaV~L 367 (609)
..+..|-..|...||..+.+.+||+.=|--.|+...- -+...++++... .|| .+.-..||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 4567788889999999999999999999999997532 233334444332 233 233344787778
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
-++-.+++..|.+|++.||+|-|.|..|...|+.+.+. |. +=+-+-|++|-|+... .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88889999999999999999999999999999998763 63 5566778999888654 34332211111
Q ss_pred c--cCCCCCHHH-------------HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 448 E--HEPVKELVD-------------AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 448 ~--~~~~~~L~e-------------~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
+ ......+.+ -+-.++.|||+=+.. ++..|++-++.+.+. --.+|.--+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl-~~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCAT-QNELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSC-TTCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeeccc-cccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0 000011111 123468999998776 469999999998642 2357777777 54
No 20
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.88 E-value=0.016 Score=58.65 Aligned_cols=88 Identities=17% Similarity=0.219 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 446 (609)
-.|++.+++..+.++++.+++|+|||.+|.+++..+.. .|. ++|+++|+. .++ .+...+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~-----~G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVT-----HGV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 46788999988889999999999999777777666654 375 679988874 222 112222221
Q ss_pred cc-------cCCCCCHHHHHhccCCcEEEEccCCC
Q 007301 447 HE-------HEPVKELVDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 447 ~~-------~~~~~~L~e~V~~vkPtvLIG~S~~~ 474 (609)
.. ..+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888886 89999887654
No 21
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=95.85 E-value=0.28 Score=53.38 Aligned_cols=190 Identities=17% Similarity=0.160 Sum_probs=127.9
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHH--HHHHHHc---CCCe-ee----------ecCCcchHHHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TTHL-VF----------NDDIQGTASVVLA 368 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf--~lL~ryr---~~~~-~F----------NDDiQGTaaV~LA 368 (609)
.+..|...|...||..+.+-+||..=|-=+|++..-.. -+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 45667788888899999888899999999999864321 1344554 2222 11 1222357777777
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-----
Q 007301 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----- 443 (609)
Q Consensus 369 gll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~----- 443 (609)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|+... .|+..+.
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 8888889899999999999999999999999988764 63 3445889999888754 2432211
Q ss_pred ----------hhccccCCCC--CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CCCCCCCCHHH
Q 007301 444 ----------PWAHEHEPVK--ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTSQSECTAEE 510 (609)
Q Consensus 444 ----------~fA~~~~~~~--~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~aEct~e~ 510 (609)
.|+...+..+ +- +-+-.++.||||=+.. ++..|++-++.+-+. .-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~-~~i~~~~~DI~iPcA~-~~~I~~~na~~l~~~-~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFEN-QKPWNIPCDIAFPCAT-QNEINENDADLFIQN-KCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECS-CCGGGSCCSEEEECSC-TTCBCHHHHHHHHHH-TCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCC-ccccccCccEEEeCCC-ccchhhHHHHHHHhc-CCeEEEecCCCCCC-HH--HHH
Confidence 1211001000 00 1133568999998777 679999999998432 4689999998 653 44 455
Q ss_pred Hhc
Q 007301 511 AYT 513 (609)
Q Consensus 511 A~~ 513 (609)
.+.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 22
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.83 E-value=0.019 Score=59.35 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=78.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcc-hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAG-sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~ 439 (609)
+-.-+|-.|++-.++..+.+++..++|++|+| ..|.-+|.++... | .++.+++++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44456788899999999999999999999999 4799999888652 4 358888743
Q ss_pred hhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007301 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (609)
Q Consensus 440 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 500 (609)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 1468899987 99999999999999999985 55677766654
No 23
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.78 E-value=0.11 Score=56.19 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=122.4
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHH---HHHHHc---CC--Ceee----------ecCCcchHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TT--HLVF----------NDDIQGTASVV 366 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr---~~--~~~F----------NDDiQGTaaV~ 366 (609)
.+..|-..|...|++++.+.-||..-|-=+|++.. ..+ +.+.|+ .. -.++ .+.-.-||-=+
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~-~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv 218 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTG-EREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGV 218 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCC-HHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHH
Confidence 45567788899999999999999999999999874 222 445562 11 1222 23334577667
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC---Cchhcc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---LQHFKK 443 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~---L~~~k~ 443 (609)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++..+=+ |..++.
T Consensus 219 ~~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga------kvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 219 FITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA------RVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC------EEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 777888899999999999999999999999999988653 63 3344999999998875311 222222
Q ss_pred hhcc--ccC--CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 444 PWAH--EHE--PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 444 ~fA~--~~~--~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
.+-. +-+ ..-+-.| +-.++.||||=++. ++..|++-++.+ .-.+|.--+| |+
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~ 344 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPT 344 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCcccc
Confidence 2110 000 0012334 45678999998766 668888888777 5678888888 65
No 24
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.66 E-value=0.028 Score=57.77 Aligned_cols=92 Identities=16% Similarity=0.278 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh
Q 007301 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 441 (609)
Q Consensus 363 aaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~ 441 (609)
.-++-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 3567788899999999999999999999987 899999988652 53 47777652
Q ss_pred cchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 442 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 442 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899987 99999999999999999884 455666554
No 25
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.52 E-value=0.16 Score=54.55 Aligned_cols=179 Identities=15% Similarity=0.160 Sum_probs=111.7
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH--HHHHHHHc---CCC---eee----------ecCCcchHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TTH---LVF----------NDDIQGTASVV 366 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr---~~~---~~F----------NDDiQGTaaV~ 366 (609)
.+..|-..|...|++++.+.-||..-|-=+|++..-. --+.+.|+ ... .++ .+.-.-||-=+
T Consensus 116 ~s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv 195 (421)
T 2yfq_A 116 LSERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGV 195 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHH
Confidence 3456777889999999999999999999999997521 12455663 221 222 22234566666
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc-----CcccCCCccCCchh
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK-----GLIVSSRLESLQHF 441 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~-----GLi~~~R~~~L~~~ 441 (609)
.-++-.+++..|.+|++.||+|.|.|..|...|++|.+ .|. +=+-+.|++ |-|++..+ |+..
T Consensus 196 ~~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~-----~Ga------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 196 AVVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIER-----QGG------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHH-----TTC------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 67778889999999999999999999999999998865 363 334489999 99987653 3221
Q ss_pred cc-hhccccCCCCC------H-HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 442 KK-PWAHEHEPVKE------L-VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 442 k~-~fA~~~~~~~~------L-~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
.. .+......+.+ + .+.+-.++.||||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEEFWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC---------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccchhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 11 11111000000 0 01223456788886654 567777777666 4566666666 54
No 26
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.46 E-value=0.021 Score=59.32 Aligned_cols=113 Identities=19% Similarity=0.285 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHH---------hCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCC
Q 007301 365 VVLAGLISAMKF---------LGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSR 434 (609)
Q Consensus 365 V~LAgll~Alr~---------~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R 434 (609)
++-.|.+-.++. .|.++...++|++|+|. .|.-+|.++... | .+++++|++..-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 344555666666 68899999999999996 598888887642 4 3589999876655555
Q ss_pred ccCCchhcchhccccCC---C--CCHHHHHhccCCcEEEEccCCCCC-CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 435 LESLQHFKKPWAHEHEP---V--KELVDAVNAIKPTILIGTSGQGRT-FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 435 ~~~L~~~k~~fA~~~~~---~--~~L~e~V~~vkPtvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.+.+... ++.... . .+|.++++. .|++|+..+.++. ++.|+|+ +.-+|+-++-|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434321 111100 1 479999998 9999999999887 9998874 334666665553
No 27
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.35 E-value=0.041 Score=56.50 Aligned_cols=96 Identities=17% Similarity=0.243 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch
Q 007301 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (609)
Q Consensus 362 TaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~ 440 (609)
-.-++-.|++..++..+.+|++.++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 34578888999999999999999999999986 799999988753 53 47777752
Q ss_pred hcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC-CCC
Q 007301 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS-NPT 501 (609)
Q Consensus 441 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 501 (609)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+. ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899987 99999999999999999885 555666553 443
No 28
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.26 E-value=0.02 Score=57.98 Aligned_cols=118 Identities=20% Similarity=0.303 Sum_probs=70.1
Q ss_pred CeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCccc
Q 007301 352 HLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV 431 (609)
Q Consensus 352 ~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~ 431 (609)
..-+|-| -.|++.+++..+.++++.+++|+|||.+|.++|..+.. .|. ++++++++.
T Consensus 94 l~G~NTD--------~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~---- 150 (277)
T 3don_A 94 WIGYNTD--------GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT---- 150 (277)
T ss_dssp EEEECCH--------HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----
T ss_pred EEEECCh--------HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----
Confidence 4556666 34677888888999999999999999888888777654 364 678888874
Q ss_pred CCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCH--HHHHHHHccCCCcEEEecC-CCC
Q 007301 432 SSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTK--EVVEAMASLNEKPIIFSLS-NPT 501 (609)
Q Consensus 432 ~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~--evv~~Ma~~~erPIIFaLS-NPt 501 (609)
.++.+.+.. .+.. ....++.++++. +|++|-++..+ .... +.+ ......+..+++=++ ||.
T Consensus 151 ~~~a~~la~---~~~~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 151 MSRFNNWSL---NINK--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp GGGGTTCCS---CCEE--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred HHHHHHHHH---hccc--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 233222321 1110 112345566665 89999776544 2211 011 112234567788775 654
No 29
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.16 E-value=0.045 Score=56.01 Aligned_cols=92 Identities=13% Similarity=0.274 Sum_probs=73.0
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~ 439 (609)
+-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+.+++++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 344577889999999998 9999999999985 899999988753 53 57777652
Q ss_pred hhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 440 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
..+|.+.++. +|++|...+.++.+++++++ +.-+|+=++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999998874 445665554
No 30
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.15 E-value=0.039 Score=56.77 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=77.5
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~ 439 (609)
+-.-++-.|++-.++..+.+++..++|++|+|. .|.-+|.++... | .++.+++++ .
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~--------t--- 193 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF--------T--- 193 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS--------C---
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC--------c---
Confidence 445677888999999999999999999999995 699998887642 4 457888642 0
Q ss_pred hhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007301 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (609)
Q Consensus 440 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 500 (609)
.+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|
T Consensus 194 -------------~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 194 -------------KNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp -------------SCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred -------------hhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 468899997 99999999999999999984 55577766654
No 31
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.08 E-value=0.053 Score=55.74 Aligned_cols=95 Identities=17% Similarity=0.281 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh
Q 007301 363 ASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF 441 (609)
Q Consensus 363 aaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~ 441 (609)
.-++-.|++..++..+.+|+..++|++|+|. .|..+|.++... |. .+.+++++ .
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------T------ 195 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------T------ 195 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT-------C------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC-------C------
Confidence 3567788999999999999999999999875 899999988753 53 46777642 0
Q ss_pred cchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEec-CCCC
Q 007301 442 KKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL-SNPT 501 (609)
Q Consensus 442 k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL-SNPt 501 (609)
.+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=+ +||.
T Consensus 196 -----------~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 196 -----------RDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp -----------SCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred -----------cCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 368899987 99999999999999999885 55566655 3554
No 32
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.03 E-value=0.017 Score=58.52 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=56.6
Q ss_pred HHHHHHHHHhC-CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc
Q 007301 368 AGLISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA 446 (609)
Q Consensus 368 Agll~Alr~~g-~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA 446 (609)
.|++.+++..+ .+++..+++|+|||.+|..+|..+.. .|. ++++++|+. .+| .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~-----~G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLS-----TAA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 78999999999999888888777654 364 579988874 122 111111111
Q ss_pred c---ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007301 447 H---EHEPVKELVDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 447 ~---~~~~~~~L~e~V~~vkPtvLIG~S~~~ 474 (609)
. ......++.++++. .|++|-+.+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011245566655 99999887755
No 33
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.01 E-value=0.035 Score=57.30 Aligned_cols=50 Identities=30% Similarity=0.414 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-.|++.+|+..|.++++.+++++|||.+|.+||..+.. .|. ++|+++++.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~ 187 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRK 187 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECC
Confidence 46788888888999999999999999777777766654 374 689999885
No 34
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.96 E-value=0.012 Score=52.21 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=50.2
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~ 440 (609)
|-.+|+.+++-.+-+.. +.+++|+|+|..|..++..+.. .|. + ++++|++ .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33445555443333322 7899999999999888776643 243 4 8888873 111 212
Q ss_pred hcchhccccCCCCCHHHHHhccCCcEEEEccCCC
Q 007301 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 441 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~ 474 (609)
..+.|.-+.....++.++++. .|++|=+++.+
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~ 91 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSK 91 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCS
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCC
Confidence 121221111134578888876 88888665543
No 35
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.92 E-value=0.037 Score=57.01 Aligned_cols=90 Identities=27% Similarity=0.365 Sum_probs=57.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
.|++.+++..|.++++.+++++|||.+|.+|+..+.. .|. ++|+++++. ..|.++.....+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888999999999999999887777776654 375 689998873 2221111111112211
Q ss_pred c------cCCCCCH---HHHHhccCCcEEEEccCCC
Q 007301 448 E------HEPVKEL---VDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 448 ~------~~~~~~L---~e~V~~vkPtvLIG~S~~~ 474 (609)
. ..+..++ .+.++. .|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566665 89999777654
No 36
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.85 E-value=0.53 Score=50.53 Aligned_cols=179 Identities=18% Similarity=0.140 Sum_probs=119.2
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCc--HHHHHHHHc---CC--Ceeee----------cCCcchHHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHN--AFDLLEKYG---TT--HLVFN----------DDIQGTASVVL 367 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~n--Af~lL~ryr---~~--~~~FN----------DDiQGTaaV~L 367 (609)
.+.+|-..|...|++++.+.-||..-|-=+|++..- ---+.+.|+ .. ..++- +.-.-||-=+.
T Consensus 114 ~s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 193 (415)
T 2tmg_A 114 LSRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVK 193 (415)
T ss_dssp SCHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHH
Confidence 345677788999999999998999889899998752 111334552 21 12332 22234666666
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhc-chhc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPWA 446 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k-~~fA 446 (609)
-++-.+++..|.+|++.||++.|.|..|...|++|.+ +.|. +=+-+.|++|-+++..+ |+... +.+.
T Consensus 194 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e----~~Ga------kvVavsD~~G~i~dp~G--ld~~~l~~~~ 261 (415)
T 2tmg_A 194 VCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQ----ELGS------KVVAVSDSRGGIYNPEG--FDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHH----TTCC------EEEEEECSSCEEECTTC--CCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHH----hcCC------EEEEEEeCCCeEECCCC--CCHHHHHHHH
Confidence 6777888899999999999999999999999988865 1253 33448999999887653 32211 1111
Q ss_pred cccCC--------CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 447 HEHEP--------VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 447 ~~~~~--------~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
..... .-+-.| +-.++.|+||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 11000 012334 55678999997765 568898888776 4568888887 55
No 37
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.85 E-value=0.059 Score=53.66 Aligned_cols=145 Identities=14% Similarity=0.308 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhcC--------CCceeeeecCCCCcHHHHHH--HHcCCCeeeecCCcchHHHHHHHHHHHHHHhCCCCCC
Q 007301 314 LHEFMTAVKQNYG--------ERILIQFEDFANHNAFDLLE--KYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLAD 383 (609)
Q Consensus 314 idEfv~Av~~~fG--------p~~lIqfEDf~~~nAf~lL~--ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d 383 (609)
+++|++.++..|. ...++.+=|- ++.|..+=. ....+ .=+|-|- .|++.+|+.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 5666666664442 2234555555 555554310 00011 4566663 3677777654 5778
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
+++|+|||.+|.+++..|.. .|. ++|+++|+. .+|.+.|.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~-----~G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQ-----MGV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 99999999999888877765 364 689999884 233222322 1111 123567888876
Q ss_pred CcEEEEccCCC-----CCCCHHHHHHHHccCCCcEEEecCC
Q 007301 464 PTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 464 PtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+|++|-++..+ -.+.++.++ +..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l~------~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSLK------NLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHHT------TCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHhC------cCCEEEEeeC
Confidence 99999765433 134444432 5667776653
No 38
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.83 E-value=0.48 Score=51.77 Aligned_cols=178 Identities=15% Similarity=0.173 Sum_probs=120.0
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH--HHHHHHHc---CC-Ceee----------ecCCcchHHHHHHH
Q 007301 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYG---TT-HLVF----------NDDIQGTASVVLAG 369 (609)
Q Consensus 306 ~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr---~~-~~~F----------NDDiQGTaaV~LAg 369 (609)
+..|...|-..||..+.+..||..=|-=+|++..-. --+.+.|+ .. ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 456677788889999998889998888999987422 11345554 21 1111 12334566666777
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEE-EEcccCcccCCCccCCchh-------
Q 007301 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIVSSRLESLQHF------- 441 (609)
Q Consensus 370 ll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvDs~GLi~~~R~~~L~~~------- 441 (609)
+-.+++..|.+|++.||+|-|.|..|...|+.+.+. |. +++ +.|++|-|+... .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788889899999999999999999999999988653 63 444 888888887654 23221
Q ss_pred -c-------chhcccc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 442 -K-------KPWAHEH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 442 -k-------~~fA~~~---~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
| ..|+... +.... .+.. .++.||||=+.. ++..|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~-~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPN-EKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSS-CCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecC-cCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 1222110 00100 1222 578999998775 67999999999854 45679998888 54
No 39
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=94.78 E-value=0.062 Score=55.53 Aligned_cols=95 Identities=23% Similarity=0.303 Sum_probs=75.2
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCC
Q 007301 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL 438 (609)
Q Consensus 360 QGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L 438 (609)
.|-.-++-.|++..++..+.+|+..++|++|+|. .|..+|.++... |. .+.+++++ .
T Consensus 142 ~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T--- 199 (300)
T 4a26_A 142 PPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T--- 199 (300)
T ss_dssp CSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S---
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C---
Confidence 3444677888999999999999999999999876 899999988753 53 57888762 1
Q ss_pred chhcchhccccCCCCCHH--HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 439 QHFKKPWAHEHEPVKELV--DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 439 ~~~k~~fA~~~~~~~~L~--e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.+|. +.++. .|++|...+.++.++.++++ +.-+|+=++
T Consensus 200 --------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 --------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp --------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred --------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1355 88887 99999999999999999874 555666554
No 40
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.74 E-value=0.2 Score=53.85 Aligned_cols=179 Identities=18% Similarity=0.168 Sum_probs=117.1
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHH---HHHHHc---CC--CeeeecC----------CcchHHHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKYG---TT--HLVFNDD----------IQGTASVV 366 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~---lL~ryr---~~--~~~FNDD----------iQGTaaV~ 366 (609)
.+.+|-..|...|+.++.+.-||..-|-=+|++.. +.+ +.+.|+ .. ..++.-+ -.-||-=+
T Consensus 115 ~s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv 193 (421)
T 1v9l_A 115 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGV 193 (421)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHH
Confidence 34567788899999999999999999999999973 222 235552 21 1222222 12355555
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC---Cchhcc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES---LQHFKK 443 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~---L~~~k~ 443 (609)
.-++-.+++..|.+|++.||+|.|.|..|...|+++.+ .|. |=+-+.|++|-|++..+=+ |..++.
T Consensus 194 ~~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e-----~Ga------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 194 AVATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEK-----MGA------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHT-----TTC------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----CCC------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 66677788889999999999999999999999987754 363 3334899999988764211 222222
Q ss_pred hhcc-------cc---CCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 444 PWAH-------EH---EPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 444 ~fA~-------~~---~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
..-. .. ..+.+-.| +-.++.|+|+=+. .++..|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A-~~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAA-IENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECS-CSSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecC-cCCccchhhHHHc----CceEEEecCCCcC
Confidence 1110 00 11101122 3456889999766 4678888777766 5678888888 55
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.67 E-value=0.21 Score=52.51 Aligned_cols=102 Identities=20% Similarity=0.339 Sum_probs=64.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
++.+.+++|+|+|..|..++..+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999988887643 64 679988873 111 1111111110111224688888
Q ss_pred hccCCcEEEEccCCC-CCCCHHHHHH--HH-ccCCCcEEEecCCCC
Q 007301 460 NAIKPTILIGTSGQG-RTFTKEVVEA--MA-SLNEKPIIFSLSNPT 501 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 501 (609)
+. .|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 64 89999876644 3567888887 43 223344566666654
No 42
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.53 E-value=0.15 Score=55.76 Aligned_cols=123 Identities=16% Similarity=0.240 Sum_probs=87.5
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC
Q 007301 358 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 437 (609)
Q Consensus 358 DiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~ 437 (609)
.+.|.......|+ .+..+..+.+.+++|+|.|..|.++|+.+... |+ +++.+|.+.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3445555555662 35688899999999999999999999988653 63 6888887521 00
Q ss_pred CchhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhc
Q 007301 438 LQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (609)
Q Consensus 438 L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~ 513 (609)
+. .+...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.+.-. .|+.-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 01111112479999986 99999998888999999999886 677888777644 6677766665
No 43
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.31 E-value=0.98 Score=49.03 Aligned_cols=179 Identities=17% Similarity=0.179 Sum_probs=117.9
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHH--HHHHHHc---CC--Ceeeec----------CCcchHHHHHH
Q 007301 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAF--DLLEKYG---TT--HLVFND----------DIQGTASVVLA 368 (609)
Q Consensus 306 ~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf--~lL~ryr---~~--~~~FND----------DiQGTaaV~LA 368 (609)
+..|-..|-..||..+.+..||..-|-=+|++..-.. -+.+.|+ +. .-++-. .-.-||-=+.-
T Consensus 136 s~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~ 215 (449)
T 1bgv_A 136 SDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVY 215 (449)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHH
Confidence 3456777778899999888999999999999876211 1223442 22 122211 22346666666
Q ss_pred HHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCC-chh------
Q 007301 369 GLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QHF------ 441 (609)
Q Consensus 369 gll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L-~~~------ 441 (609)
++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +=+-+.|++|-|++.. .+ ++.
T Consensus 216 ~~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~ 282 (449)
T 1bgv_A 216 YVEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYML 282 (449)
T ss_dssp HHHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHH
T ss_pred HHHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHH
Confidence 7778888899999999999999999999999888664 53 3344789888888753 23 211
Q ss_pred --c-------chhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 442 --K-------KPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 442 --k-------~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
+ ..|+.. .+.+. -.+ +-.++.|+|+=+. .++..|++-.+.+.+ |.-.+|.--+| |+
T Consensus 283 ~~k~~~~g~v~~y~~~~~a~~i~-~~e-~~~~~~Dil~P~A-~~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 283 EMRASGRNKVQDYADKFGVQFFP-GEK-PWGQKVDIIMPCA-TQNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHHCCCCTHHHHHHHTCEEEE-TCC-GGGSCCSEEECCS-CTTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhccCCChhhcccccCCEEeC-chh-hhcCCcceeeccc-cccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 00000 001 2256899999776 467999999999864 23578888888 65
No 44
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.31 E-value=0.065 Score=53.69 Aligned_cols=110 Identities=18% Similarity=0.204 Sum_probs=72.4
Q ss_pred HHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCC
Q 007301 374 MKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVK 453 (609)
Q Consensus 374 lr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~ 453 (609)
++..+..|.+.+++|+|+|..|..+|+.+.. .|. +++.+|+.- .+ +...+..-++ .....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~~~g~~-~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAA-----LGA-------NVKVGARSS----AH---LARITEMGLV-PFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESSH----HH---HHHHHHTTCE-EEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHH-----CCC-------EEEEEECCH----HH---HHHHHHCCCe-EEchh
Confidence 3456789999999999999999999988764 263 688888741 11 1111100011 00124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHH
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEA 511 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A 511 (609)
+|.|+++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a 257 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYA 257 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHH
Confidence 68888875 999997665 4799999888775 667888888522 34445443
No 45
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=93.77 E-value=0.13 Score=52.76 Aligned_cols=98 Identities=13% Similarity=0.269 Sum_probs=75.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ 439 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~ 439 (609)
+-.-++-.|++-.++..+.+|+..++|++|+|. .|.-+|.++.. .|. ...+++++++
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445567788899999999999999999999996 58888877753 210 1457777542
Q ss_pred hhcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCC
Q 007301 440 HFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNP 500 (609)
Q Consensus 440 ~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 500 (609)
..+|.+.++. +|++|+..+.++.+++|+|+ +.-+|+=++-|
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 234 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVS 234 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCC
Confidence 0468999987 99999999999999999985 45677766655
No 46
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.74 E-value=0.21 Score=52.45 Aligned_cols=165 Identities=18% Similarity=0.191 Sum_probs=105.7
Q ss_pred chhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcH--HHHHHHHcC---CCeee---ecCCcchHHHHHHHHHHHHHHh
Q 007301 306 IGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNA--FDLLEKYGT---THLVF---NDDIQGTASVVLAGLISAMKFL 377 (609)
Q Consensus 306 ~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nA--f~lL~ryr~---~~~~F---NDDiQGTaaV~LAgll~Alr~~ 377 (609)
+..+-++++..|.+++.+..|+ -|-=+|++..-. --+.+.|+. +-..+ .|--.-||-=+.-++-.+++..
T Consensus 91 s~~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~ 168 (355)
T 1c1d_A 91 DPSTWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHR 168 (355)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 3345567788888888887765 467889975321 124455552 11111 1111236666666777888888
Q ss_pred CC-CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc-CCCCCH
Q 007301 378 GG-SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKEL 455 (609)
Q Consensus 378 g~-~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L 455 (609)
|. .|++.+++|.|.|..|..+|+.+.. .|. ++++.|.+ ..| ..|++.. ...-++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~-----~Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~ 224 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAE-----AGA-------QLLVADTD----TER--------VAHAVALGHTAVAL 224 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSC----HHH--------HHHHHHTTCEECCG
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHH-----CCC-------EEEEEeCC----ccH--------HHHHHhcCCEEeCh
Confidence 98 8999999999999999999988754 363 67788874 111 1222211 011133
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CCC
Q 007301 456 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PTS 502 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~ 502 (609)
.|.. .++.|+|+= .+.++.++++-++.|. -.+|.--+| |+.
T Consensus 225 ~ell-~~~~DIliP-~A~~~~I~~~~~~~lk----~~iVie~AN~p~t 266 (355)
T 1c1d_A 225 EDVL-STPCDVFAP-CAMGGVITTEVARTLD----CSVVAGAANNVIA 266 (355)
T ss_dssp GGGG-GCCCSEEEE-CSCSCCBCHHHHHHCC----CSEECCSCTTCBC
T ss_pred HHhh-cCccceecH-hHHHhhcCHHHHhhCC----CCEEEECCCCCCC
Confidence 3433 357899995 4567799999999983 468887887 553
No 47
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=93.73 E-value=0.12 Score=54.23 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHhcCCCceeeeecCCCCcHHHHHHHHcCCC-eeeecC------C---cchHHHHHHHHHHHHHHh-CC
Q 007301 311 AELLHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTH-LVFNDD------I---QGTASVVLAGLISAMKFL-GG 379 (609)
Q Consensus 311 ~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~-~~FNDD------i---QGTaaV~LAgll~Alr~~-g~ 379 (609)
++++..|.+++.+.+|+ -|-=+|++..- +.+...-+++ ++---- + .-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~--~~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTV--DDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCH--HHHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCH--HHHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677777777777775 46678887533 2334443344 211111 1 235554555666666664 76
Q ss_pred -CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 380 -SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 380 -~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ + +.+..+.+.|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~------~-~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN------K-AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC------H-HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC------H-HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999988653 63 47788852 1 11332222221 111123232
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
. ..+.|++|=+ +..++++++.++.| .-.+|.--+| |+
T Consensus 227 l-~~~~DIvip~-a~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 Y-GVTCDIFAPC-ALGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp T-TCCCSEEEEC-SCSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred h-ccCCcEeecc-chHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 2 2578999955 45679999988887 3467776666 54
No 48
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.69 E-value=0.15 Score=52.62 Aligned_cols=96 Identities=20% Similarity=0.290 Sum_probs=63.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc----CCCCCHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELV 456 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~ 456 (609)
+...+++|+|||.+|.+++..+.. .| | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~-----~G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVG-----LG-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH-----TT-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CC-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 667899999999999999887754 36 2 68888874 122 222222232210 1113566
Q ss_pred HHHhccCCcEEEEccCCCCC-----CCHHHHHHHHccCCCcEEEecCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRT-----FTKEVVEAMASLNEKPIIFSLSNP 500 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 500 (609)
+.++. .|++|.+.+.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77764 8999998876652 5888888885 45677777753
No 49
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=93.37 E-value=0.55 Score=49.68 Aligned_cols=186 Identities=12% Similarity=0.101 Sum_probs=111.9
Q ss_pred CCeeeecCCc---chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 351 THLVFNDDIQ---GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 351 ~~~~FNDDiQ---GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+.+.|.--- .+|=-+++.+++..|..|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|..
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 4566664332 344458999999999999999999999999999999999988643 64 58888864
Q ss_pred CcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc---C-----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 428 GLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS---G-----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 428 GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
.- . . . ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..+|.=.|.
T Consensus 149 ~~------~-~-~-------~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-E-------PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-S-------TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-c-------cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 11 0 0 0 01123579999986 89988542 1 35689999998886 6678876664
Q ss_pred CCCCCCCCHHHHh-c-cccCcEEEecCCCC--CccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007301 500 PTSQSECTAEEAY-T-WSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 575 (609)
Q Consensus 500 Pt~~aEct~e~A~-~-wT~GraifASGSPF--~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aL 575 (609)
-+..-++|+ + ..+|+..-|.=-=| +| ..+..-+ + +|..+-|=++--...+ -..|...+++.+
T Consensus 209 ----G~vvd~~aL~~aL~~g~i~~A~LDV~~~EP-~~~~~l~---~-~nvi~TPHiag~t~e~-----~~~~~~~~~~nl 274 (380)
T 2o4c_A 209 ----GAVVDNQALRRLLEGGADLEVALDVWEGEP-QADPELA---A-RCLIATPHIAGYSLEG-----KLRGTAQIYQAY 274 (380)
T ss_dssp ----GGGBCHHHHHHHHHTTCCEEEEESCCTTTT-SCCHHHH---T-TCSEECSSCTTCCHHH-----HHHHHHHHHHHH
T ss_pred ----CcccCHHHHHHHHHhCCCceEEeeeeccCC-CCchhhc---c-CCEEEccccCcCCHHH-----HHHHHHHHHHHH
Confidence 222222222 2 23455433311111 11 0111111 1 4788888776322221 134555666666
Q ss_pred HcccCcC
Q 007301 576 AGQVTQE 582 (609)
Q Consensus 576 A~~v~~e 582 (609)
......+
T Consensus 275 ~~~l~g~ 281 (380)
T 2o4c_A 275 CAWRGIA 281 (380)
T ss_dssp HHHHTCC
T ss_pred HHHHcCC
Confidence 6665433
No 50
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.33 E-value=0.16 Score=50.61 Aligned_cols=121 Identities=16% Similarity=0.241 Sum_probs=72.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
..||.|+|+|..|.++|..+... |.+ ..+++++|++ .+ .+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 642 2478888873 11 122222111 01112477888875
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCcEEEecCCCCCCCCCCHHHHhccccC--cEEEecCCCCCcccc
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIFASGSPFDPFEY 532 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~~aEct~e~A~~wT~G--raifASGSPF~pv~~ 532 (609)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .++.-+|... +++-+ -|+.|..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 78777 34334 3567888888754 56668887777664 3344444332 33322 36666654
No 51
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=93.09 E-value=0.55 Score=50.31 Aligned_cols=115 Identities=23% Similarity=0.269 Sum_probs=81.3
Q ss_pred CchhhhHHHHHHHHHHHHHhcCCCceeeeecCCCCcHHH---HHHHH---cCCC-e---eeecC----------CcchHH
Q 007301 305 AIGQEYAELLHEFMTAVKQNYGERILIQFEDFANHNAFD---LLEKY---GTTH-L---VFNDD----------IQGTAS 364 (609)
Q Consensus 305 ~~geey~~~idEfv~Av~~~fGp~~lIqfEDf~~~nAf~---lL~ry---r~~~-~---~FNDD----------iQGTaa 364 (609)
.+.+|-..|...|++++.+.-||..-|-=+|++.. +.+ +.+.| +... + ++--+ -.-||-
T Consensus 114 ~s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~ 192 (419)
T 1gtm_A 114 LSDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATAR 192 (419)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhh
Confidence 34567788899999999998899998999999873 222 23444 2221 2 33222 234666
Q ss_pred HHHHHHHHHHHHhCCC-CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEE-EEcccCccc
Q 007301 365 VVLAGLISAMKFLGGS-LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW-LVDSKGLIV 431 (609)
Q Consensus 365 V~LAgll~Alr~~g~~-L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~-lvDs~GLi~ 431 (609)
=+.-++-.+++..|.+ |++.++.|+|.|..|..+|+++... .|+ +++ +-|+.|-+.
T Consensus 193 Gv~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~----~G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 193 GASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSED----FGM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHh----cCC-------EEEEEeCCCcccc
Confidence 6666778888999999 9999999999999999999987651 264 344 448876443
No 52
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=92.90 E-value=0.15 Score=51.90 Aligned_cols=158 Identities=18% Similarity=0.231 Sum_probs=91.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
.|++.+|+..|.++++.+++++|||.+|.+++..+.. .|. ++|+++++. .+|...|. ..|.
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~-----~G~------~~v~v~nRt----~~ka~~La---~~~~- 167 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKD-----NFA------KDIYVVTRN----PEKTSEIY---GEFK- 167 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHH-----TTC------SEEEEEESC----HHHHHHHC---TTSE-
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHH-----cCC------CEEEEEeCC----HHHHHHHH---HhcC-
Confidence 7889999988999999999999999888888877754 364 689998874 22211121 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC---C----CCCHHHHHHHHccCCCcEEEecC-CCCCCCCCCHH--HHhccccC
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQG---R----TFTKEVVEAMASLNEKPIIFSLS-NPTSQSECTAE--EAYTWSQG 517 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIFaLS-NPt~~aEct~e--~A~~wT~G 517 (609)
..++.+.-+ +++|++|-++..| . .+..+.++ +..++|=+. ||. -|+= +|-+ .|
T Consensus 168 ----~~~~~~l~~-l~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~----~T~ll~~A~~--~G 230 (282)
T 3fbt_A 168 ----VISYDELSN-LKGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV----ETLFLKYARE--SG 230 (282)
T ss_dssp ----EEEHHHHTT-CCCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS----SCHHHHHHHH--TT
T ss_pred ----cccHHHHHh-ccCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC----CCHHHHHHHH--Cc
Confidence 012323222 3799999877543 1 14444443 567888665 654 3552 3332 34
Q ss_pred cEEEecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCc
Q 007301 518 RAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQ 581 (609)
Q Consensus 518 raifASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v~~ 581 (609)
|-+..| .. |++.=|.--=-+-.+ .+.+.+.+.++.+.+...+..
T Consensus 231 -~~~~~G----------l~--------MLv~Qa~~~f~lwtg-~~~~~~~~~~~~~~~~~~~~~ 274 (282)
T 3fbt_A 231 -VKAVNG----------LY--------MLVSQAAASEEIWND-ISIDEIIVDEIFEVLEEKIKS 274 (282)
T ss_dssp -CEEECS----------HH--------HHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHC
T ss_pred -CeEeCc----------HH--------HHHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHHhhhc
Confidence 223344 32 333322222222333 346777777777777665543
No 53
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=92.89 E-value=0.18 Score=55.18 Aligned_cols=110 Identities=17% Similarity=0.300 Sum_probs=78.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch
Q 007301 361 GTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (609)
Q Consensus 361 GTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~ 440 (609)
|+......|+ .+.+|..+.+.+++|+|.|..|.++|+.+.. .|+ +++.+|++.. + .++.
T Consensus 258 ~~~~~l~~gw---~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~-----~G~-------~V~v~d~~~~----~--~~~a 316 (494)
T 3d64_A 258 GCRESLVDGI---KRATDVMIAGKIAVVAGYGDVGKGCAQSLRG-----LGA-------TVWVTEIDPI----C--ALQA 316 (494)
T ss_dssp HHHTTHHHHH---HHHHCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECSCHH----H--HHHH
T ss_pred hhhhhhhhhh---hhccccccCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCChH----h--HHHH
Confidence 3333445552 3678899999999999999999999998853 263 6888887521 0 0000
Q ss_pred hcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 441 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
. ...-...+|.|+++. .|++|......++++++.++.|. +.-||.=.+...
T Consensus 317 ~-----~~G~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 317 A-----MEGYRVVTMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp H-----TTTCEECCHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred H-----HcCCEeCCHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 0 011112479999986 99999998778899999999996 677888777744
No 54
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=92.87 E-value=0.15 Score=51.64 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-.|++.+|+..|.++++.+++|+|||.+|.+++..+.. .|. ++++++++.
T Consensus 110 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~ 159 (281)
T 3o8q_A 110 GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP------ASITVTNRT 159 (281)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC------SEEEEEESS
T ss_pred HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC------CeEEEEECC
Confidence 46788888888999999999999999887777766654 364 689988874
No 55
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.65 E-value=0.19 Score=51.56 Aligned_cols=120 Identities=19% Similarity=0.244 Sum_probs=75.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCCC---CCHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 456 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~ 456 (609)
.||.|+|||+.|.++|.+++.. |+ -+++|+|.+- ++-+ .+.+.. .+......+ .++.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~----~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ 73 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVK----GMPEGKALDLSHVT-SVVDTNVSVRAEYSYE 73 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHHH-HHTTCCCCEEEECSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCh----hHHHHHHHHHHhhh-hccCCCCEEEEeCCHH
Confidence 5899999999999999998763 54 1399999852 2111 011111 111111122 5788
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccc--
Q 007301 457 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS-- 515 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT-- 515 (609)
|+++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=-|||..-. .+-+++.+
T Consensus 74 ea~~~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~---t~~~~~~~~~ 148 (331)
T 1pzg_A 74 AALTG--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCM---VKVMCEASGV 148 (331)
T ss_dssp HHHTT--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHH---HHHHHHHHCC
T ss_pred HHhCC--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHH---HHHHHHhcCC
Confidence 88987 89988665444 32 1467888889999888888889998432 33444443
Q ss_pred cCcEEEecC
Q 007301 516 QGRAIFASG 524 (609)
Q Consensus 516 ~GraifASG 524 (609)
.-.-+|++|
T Consensus 149 ~~~rviG~g 157 (331)
T 1pzg_A 149 PTNMICGMA 157 (331)
T ss_dssp CGGGEEECC
T ss_pred ChhcEEecc
Confidence 223466665
No 56
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=92.63 E-value=0.28 Score=49.99 Aligned_cols=101 Identities=22% Similarity=0.306 Sum_probs=66.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCC---CCCHHHHHh
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVN 460 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e~V~ 460 (609)
||+|+|| |..|..++.+|+. .|+ ...++|+|.+-. .....+|.+...+ . +... ..++.|+++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 7999998 9999998877653 354 357999998641 1100012221111 0 0011 136888998
Q ss_pred ccCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 461 AIKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
. .|++|=+.+.+. ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 7 899886555443 23567888888899998888899998
No 57
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.56 E-value=0.16 Score=51.04 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=60.3
Q ss_pred HHHHHHHHHH-hcCCCceeeeecCCCCcHHHHHHHHcC--------CCeeeecC-CcchHHHHHHHHHHH-HHHhCCCCC
Q 007301 314 LHEFMTAVKQ-NYGERILIQFEDFANHNAFDLLEKYGT--------THLVFNDD-IQGTASVVLAGLISA-MKFLGGSLA 382 (609)
Q Consensus 314 idEfv~Av~~-~fGp~~lIqfEDf~~~nAf~lL~ryr~--------~~~~FNDD-iQGTaaV~LAgll~A-lr~~g~~L~ 382 (609)
+.++++.++. .|+. ++.----...++++|++... +..++.|+ ..|.-.= -.|++.+ ++..|.+++
T Consensus 44 l~~~~~~~~~~~~~G---~nVTiP~K~~v~~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~ 119 (272)
T 3pwz_A 44 FEAQVLQFRSEGGKG---MNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLR 119 (272)
T ss_dssp HHHHHHHHHHTTCCE---EEECTTCHHHHHHHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCT
T ss_pred HHHHHHHHhhCCCCE---EEECchhHHHHHHHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCcc
Confidence 5666666653 4433 33333333445666554321 11133332 3442222 3588888 888888999
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+++|+|||.+|.+++..+.+ .|. ++|+++++.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-----~G~------~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-----AGP------SELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-----TCC------SEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-----cCC------CEEEEEeCC
Confidence 9999999999777777766654 364 689988874
No 58
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.54 E-value=1.2 Score=45.41 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=82.1
Q ss_pred CCCeeeecCCc---chHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhc
Q 007301 350 TTHLVFNDDIQ---GTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQT 410 (609)
Q Consensus 350 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~----------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~ 410 (609)
..+.+.|---- .+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 45667765432 3344478888888775 35789999999999999999999988642
Q ss_pred CCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHH
Q 007301 411 NMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMA 486 (609)
Q Consensus 411 G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma 486 (609)
|+ +++.+|+.. +. . .. ....-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~~---~-~~----~~~g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----IR---E-KA----EKINAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----CH---H-HH----HHTTCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----ch---h-HH----HhcCceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 64 688888641 10 0 00 0001112378899986 898885532 34688899999886
Q ss_pred ccCCCcEEEecCC
Q 007301 487 SLNEKPIIFSLSN 499 (609)
Q Consensus 487 ~~~erPIIFaLSN 499 (609)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678887776
No 59
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.49 E-value=0.22 Score=49.33 Aligned_cols=84 Identities=19% Similarity=0.371 Sum_probs=56.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
.|++.+++..|.++++.+++|+|+|.+|..+|..+... |. +++++|+. .++ .....+.|.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999998887653 52 68888874 111 111111110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 474 (609)
..-..++.++++. +|++|-+...+
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~ 197 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG 197 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC
Confidence 0011267777765 99999766544
No 60
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.49 E-value=0.14 Score=51.54 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=62.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch---hcchhccccCC--CCCHHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH---FKKPWAHEHEP--VKELVDA 458 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~---~k~~fA~~~~~--~~~L~e~ 458 (609)
.||.|+|||+.|..+|..++.. |+ ...++++|.+- ++.+.+.. +...+...... ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988653 54 25799999851 11111110 00011100001 1356 66
Q ss_pred HhccCCcEEEEccCCC-------CCC-----------CHHHHHHHHccCCCcEEEecCCCCC
Q 007301 459 VNAIKPTILIGTSGQG-------RTF-----------TKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
++. .|++|=+...+ |.. -+++++.|.+++...+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 765 88888554432 211 1588888988888888888999984
No 61
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.43 E-value=0.15 Score=49.39 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=61.9
Q ss_pred hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc--cCCCccCCc-hhcchhccc--cCC
Q 007301 377 LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI--VSSRLESLQ-HFKKPWAHE--HEP 451 (609)
Q Consensus 377 ~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi--~~~R~~~L~-~~k~~fA~~--~~~ 451 (609)
...++...||.|+|+|..|.++|..+... | .+++++|++-=- .....+.+. .....++.. ...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45678889999999999999999988763 5 368888874210 000000000 001222222 122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHH-HccCCCcEEEecCCCC
Q 007301 452 VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAM-ASLNEKPIIFSLSNPT 501 (609)
Q Consensus 452 ~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 501 (609)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999987 88887 443332 345666666 4333677999999974
No 62
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=92.35 E-value=0.68 Score=49.15 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=86.5
Q ss_pred CCCeeeecCC---cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 350 TTHLVFNDDI---QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 350 ~~~~~FNDDi---QGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
..+.+.|.-- +.+|=-+++.+|+..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|.
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3566666532 3455568999999999999999999999999999999999988653 65 6888886
Q ss_pred cCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----C----CCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 427 KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----G----QGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 427 ~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~----~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.. .. .. ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..|+.=.|
T Consensus 151 ~~------~~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR------AA-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH------HH-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch------HH-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 00 10 11234689999987 89887443 1 45689999999996 677888777
Q ss_pred C
Q 007301 499 N 499 (609)
Q Consensus 499 N 499 (609)
.
T Consensus 211 R 211 (381)
T 3oet_A 211 R 211 (381)
T ss_dssp C
T ss_pred C
Confidence 6
No 63
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.22 E-value=0.2 Score=50.61 Aligned_cols=100 Identities=15% Similarity=0.290 Sum_probs=64.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC----CchhcchhccccCC---CCCHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEHEP---VKELV 456 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~----L~~~k~~fA~~~~~---~~~L~ 456 (609)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++.+. +.+. ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 64 2499999852 21110 1111 011110111 1456
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
++++. .|++|=+.+.+.. ..+++++.+.++++.-+|+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 67775 8988866544431 24677888888888899999999974
No 64
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=92.20 E-value=0.22 Score=54.06 Aligned_cols=45 Identities=22% Similarity=0.306 Sum_probs=31.8
Q ss_pred HHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCC
Q 007301 479 KEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP 526 (609)
Q Consensus 479 ~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSP 526 (609)
.|+++.|.++|+.-+++=.|||. +-+|- -+.++++=++|=.+-||
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~--~i~t~-a~~~~~~~k~vGlC~~~ 184 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV--FEITQ-AVRRWTGANIIGFCHGV 184 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH--HHHHH-HHHHHHCCCEEEECCGG
T ss_pred HHHHHHHHhhCCCeEEEEecChH--HHHHH-HHHHhCCCCeEEECCCH
Confidence 68999999999999999999998 44443 23445554555444444
No 65
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.15 E-value=0.23 Score=50.04 Aligned_cols=48 Identities=33% Similarity=0.440 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
.|++.+++..|.++++.|++++|||-|+.+|+-.+.+ .|. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~-----~g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAE-----AGI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHH-----hCC------CeEEEeCC
Confidence 4567888889999999999999999999888776654 364 78999987
No 66
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.06 E-value=0.72 Score=50.79 Aligned_cols=180 Identities=20% Similarity=0.251 Sum_probs=117.7
Q ss_pred CCchhhhHHHHHHHHHHHHH--hcCCCceeeeecCCCCcHH--HHHHHHcC---CC------eeeecC---------Ccc
Q 007301 304 RAIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNAF--DLLEKYGT---TH------LVFNDD---------IQG 361 (609)
Q Consensus 304 R~~geey~~~idEfv~Av~~--~fGp~~lIqfEDf~~~nAf--~lL~ryr~---~~------~~FNDD---------iQG 361 (609)
..+..|-..|...||..+.+ -.||..-|-=+|++..-.. -+.+.|+. .. ++-..- -.-
T Consensus 135 ~~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eA 214 (501)
T 3mw9_A 135 NYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISA 214 (501)
T ss_dssp GSCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCc
Confidence 34667888999999999985 7899999999999875321 25667742 11 111111 123
Q ss_pred hHHHHHHHHHH------HHHHhCC--CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCC
Q 007301 362 TASVVLAGLIS------AMKFLGG--SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS 433 (609)
Q Consensus 362 TaaV~LAgll~------Alr~~g~--~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~ 433 (609)
||-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.+.+. |. +=+-+.|++|-|+..
T Consensus 215 Tg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~ 283 (501)
T 3mw9_A 215 TGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNP 283 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECT
T ss_pred hHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECC
Confidence 54444444443 3446675 48999999999999999999998753 63 456689999999976
Q ss_pred CccCCch-----hcchhccc--cCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC-CC
Q 007301 434 RLESLQH-----FKKPWAHE--HEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN-PT 501 (609)
Q Consensus 434 R~~~L~~-----~k~~fA~~--~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 501 (609)
. .++. ++.....- -+....+.+.+-.++.||||=+... +..|++-++.+ .-.||.--+| |+
T Consensus 284 ~--Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 284 D--GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp T--CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred C--CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 4 2432 22221100 0000001112456789999987775 79999988877 4689999998 43
No 67
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.01 E-value=0.17 Score=49.58 Aligned_cols=81 Identities=23% Similarity=0.412 Sum_probs=54.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
.|++.+++..+.++++ +++|+|+|.+|..+|..+.. .|. +++++|++ .++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~-----~g~-------~v~v~~r~----~~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALRE-----AGL-------EVWVWNRT----PQR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS----HHH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC----HHH---HHHHHHHhcc
Confidence 5888889888889999 99999999999999887754 252 58888874 111 1111111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQG 474 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~~ 474 (609)
. ..++.++ + ++|++|-+...+
T Consensus 162 ~---~~~~~~~-~--~~Divi~~tp~~ 182 (263)
T 2d5c_A 162 R---AVPLEKA-R--EARLLVNATRVG 182 (263)
T ss_dssp E---ECCGGGG-G--GCSEEEECSSTT
T ss_pred c---hhhHhhc-c--CCCEEEEccCCC
Confidence 1 3456666 5 499999766544
No 68
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.84 E-value=0.3 Score=50.51 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=60.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc----ccCCCCCH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKEL 455 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L 455 (609)
.+...+++|+|+|..|..+|+.+.. .|. +++++|++- ++ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~-----~Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALG-----MGA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 3778999999999999999887754 362 688888741 11 1111111111 01122467
Q ss_pred HHHHhccCCcEEEEccCCCC-----CCCHHHHHHHHccCCCcEEEecCCC
Q 007301 456 VDAVNAIKPTILIGTSGQGR-----TFTKEVVEAMASLNEKPIIFSLSNP 500 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 500 (609)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788875 899999886553 46899999885 44566666643
No 69
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.45 E-value=0.23 Score=49.32 Aligned_cols=49 Identities=27% Similarity=0.355 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-.|++.+|+..|.++++.+++|+|||.+|.++|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888899999999999998888888777542 4 468888874
No 70
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.42 E-value=2.3 Score=43.56 Aligned_cols=121 Identities=18% Similarity=0.199 Sum_probs=77.3
Q ss_pred CCCeeeecCCcc---hHHHHHHHHHHHHHHh-------------------------CCCCCCceEEEeCcchHHHHHHHH
Q 007301 350 TTHLVFNDDIQG---TASVVLAGLISAMKFL-------------------------GGSLADQRFLFLGAGEAGTGIAEL 401 (609)
Q Consensus 350 ~~~~~FNDDiQG---TaaV~LAgll~Alr~~-------------------------g~~L~d~rivf~GAGsAg~GIA~l 401 (609)
..+++.|----. +|=-+++.+|+..|.. |..|.+.+|.|+|.|..|..+|..
T Consensus 89 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~ 168 (334)
T 2dbq_A 89 RGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKR 168 (334)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHH
Confidence 356666643322 3334678888776621 457889999999999999999998
Q ss_pred HHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc-C---CCCCC
Q 007301 402 IALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS-G---QGRTF 477 (609)
Q Consensus 402 i~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S-~---~~g~F 477 (609)
+.. .|. +++.+|+.. +. + ..+ .+ .-...+|.|+++. .|+++=.- . ..+++
T Consensus 169 l~~-----~G~-------~V~~~d~~~----~~-~---~~~-~~---g~~~~~l~~~l~~--aDvVil~vp~~~~t~~~i 222 (334)
T 2dbq_A 169 AKG-----FNM-------RILYYSRTR----KE-E---VER-EL---NAEFKPLEDLLRE--SDFVVLAVPLTRETYHLI 222 (334)
T ss_dssp HHH-----TTC-------EEEEECSSC----CH-H---HHH-HH---CCEECCHHHHHHH--CSEEEECCCCCTTTTTCB
T ss_pred HHh-----CCC-------EEEEECCCc----ch-h---hHh-hc---CcccCCHHHHHhh--CCEEEECCCCChHHHHhh
Confidence 864 263 688888741 11 0 000 11 0112478898886 89887442 2 23678
Q ss_pred CHHHHHHHHccCCCcEEEecCC
Q 007301 478 TKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 478 t~evv~~Ma~~~erPIIFaLSN 499 (609)
++++++.|. +..+|.-.|.
T Consensus 223 ~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 223 NEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp CHHHHHHSC---TTCEEEECSC
T ss_pred CHHHHhcCC---CCcEEEECCC
Confidence 888888885 5667776663
No 71
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.41 E-value=0.33 Score=48.06 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 367 LAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 367 LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-.|++.+|+..|.++++.+++|+|||.+|..+|..+... | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567888888888899999999999998887777776542 5 468888874
No 72
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=91.39 E-value=0.2 Score=54.18 Aligned_cols=106 Identities=17% Similarity=0.274 Sum_probs=67.1
Q ss_pred CCCceEEEeCcchH--HHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc---cCCCCCH
Q 007301 381 LADQRFLFLGAGEA--GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---HEPVKEL 455 (609)
Q Consensus 381 L~d~rivf~GAGsA--g~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~---~~~~~~L 455 (609)
+++.||.|+|||+. |.|++..|+.. ..+ . ..++|+|.+- +|-+.+....+.+.+. -.-..++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 45679999999995 78999888752 222 2 3899999751 1100000000011110 0112589
Q ss_pred HHHHhccCCcEEEEccCCC---------------CCC---------------------CHHHHHHHHccCCCcEEEecCC
Q 007301 456 VDAVNAIKPTILIGTSGQG---------------RTF---------------------TKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~---------------g~F---------------------t~evv~~Ma~~~erPIIFaLSN 499 (609)
.||++. +|.+|=.-.+| |.. -.++++.|.++++.-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89887444322 221 3577788889999999999999
Q ss_pred CC
Q 007301 500 PT 501 (609)
Q Consensus 500 Pt 501 (609)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 98
No 73
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.38 E-value=0.1 Score=52.80 Aligned_cols=122 Identities=20% Similarity=0.314 Sum_probs=68.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC--CCHHHHHhcc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~v 462 (609)
||.|+|||..|.++|..++. .|. -..++|+|.+---.......+.+.. +|..+ ... .+. ++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~-----~g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~-~~i~~~~~-~a~~~- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-----RGS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHG-TRVWHGGH-SELAD- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSC-CEEEEECG-GGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCC-eEEEECCH-HHhCC-
Confidence 79999999999999977754 254 2479999985210000000011111 12111 001 233 56665
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecC
Q 007301 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASG 524 (609)
Q Consensus 463 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASG 524 (609)
.|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. ...+.+.+.+.-.-+|.+|
T Consensus 68 -aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~g 139 (304)
T 2v6b_A 68 -AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSG 139 (304)
T ss_dssp -CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECT
T ss_pred -CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCC
Confidence 8988865544432 11788888988888888877999974 2233344444444455554
No 74
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.27 E-value=1.3 Score=48.58 Aligned_cols=108 Identities=16% Similarity=0.212 Sum_probs=75.6
Q ss_pred HHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCC
Q 007301 375 KFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVK 453 (609)
Q Consensus 375 r~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~ 453 (609)
|..+..+.+.+++|+|+|..|.++|..+.. .|. +++.+|++- .+...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka-----~Ga-------~Viv~d~~~------------~~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKG-----QGA-------RVSVTEIDP------------INALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSCH------------HHHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH------------HHHHHHHHcCCEEe
Confidence 456678899999999999999999987754 362 688888731 11111211 11124
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhc
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~ 513 (609)
++.|+++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888875 99999998888899999999986 566777777754 3665555433
No 75
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.27 E-value=0.29 Score=50.91 Aligned_cols=114 Identities=13% Similarity=0.186 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
+|.+++.... +....++.|+|+|..|..++..+... .++ ++++++|+. .++ ...+.+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 4556665553 24567999999999999888776543 243 678888873 222 2233333321
Q ss_pred --c--cCCCCCHHHHHhccCCcEEEEccCCC---CCCCHHHHHHHHccCCCcEEEecCC--CCCCCCCCHH
Q 007301 448 --E--HEPVKELVDAVNAIKPTILIGTSGQG---RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAE 509 (609)
Q Consensus 448 --~--~~~~~~L~e~V~~vkPtvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~e 509 (609)
. .....++.|+++. .|++|=++..+ -+|..+.++ +.-.|+.++. |. +-|+.++
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~ 238 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHAD 238 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHH
Confidence 0 1124689999986 89999766543 234443332 4458888875 55 6788764
No 76
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=90.97 E-value=0.16 Score=51.97 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=67.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc--Cc---ccCCCccCCchhcchhccccCCCCCHHH
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK--GL---IVSSRLESLQHFKKPWAHEHEPVKELVD 457 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~--GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~e 457 (609)
.||+|.|| |..|..++..|+. .|+-..+-...++++|.+ .- +. ....+|.+...+|..+.....++.+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~-----~~~~~~~~~~ev~l~Di~~~~~~~~~~-g~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIAN-----GDMLGKDQPVILQLLEIPNEKAQKALQ-GVMMEIDDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCSCHHHHHHHH-HHHHHHHTTTCTTEEEEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCCcCCCCCCEEEEEcCCCccccccch-hhHHHHhhhcccccCcEEEecCcHH
Confidence 58999998 9999998877754 243111112479999975 10 00 0000122211122222222257899
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 458 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
+++. .|++|=+.+.+.. .++++++++.+++ .+.+|+=.|||.
T Consensus 80 al~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 80 AFKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp HTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 9987 8998866654431 3567889999986 787777789997
No 77
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.89 E-value=0.4 Score=48.89 Aligned_cols=120 Identities=17% Similarity=0.256 Sum_probs=72.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCCCHHHHHhcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V~~v 462 (609)
.||.|+|||..|.|+|..++.. |+ -..++|+|.+-= ..+..-++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998643 54 268999998631 1111101221 1111 0111466 66776
Q ss_pred CCcEEEEccCCC--CC-----------CCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhcccc--CcEEEecC
Q 007301 463 KPTILIGTSGQG--RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (609)
Q Consensus 463 kPtvLIG~S~~~--g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~--GraifASG 524 (609)
.|++|=..+.+ |- .-+++++.|.++++.-+|+-.|||.. ...+-+++.+. -.-+|.+|
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~g 150 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIG 150 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCC
Confidence 89988655443 10 13578888889999999888999983 33334444211 12356665
No 78
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=90.86 E-value=1.8 Score=44.25 Aligned_cols=140 Identities=15% Similarity=0.155 Sum_probs=86.6
Q ss_pred eeeecCCCCcHHHHHHHHcCCCeeeecCCcc---hHHHHHHHHHHHHHHh---------------------CCCCCCceE
Q 007301 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQG---TASVVLAGLISAMKFL---------------------GGSLADQRF 386 (609)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~Alr~~---------------------g~~L~d~ri 386 (609)
|+.-..+..|- ++-.--+..+++.|----. +|=-+++.+|+..|.. |..|.+.+|
T Consensus 80 I~~~~~G~d~i-d~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 80 ISTMSVGIDHL-ALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEECCcccccc-cHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 66655555552 2212223567888764333 3444788888887732 356889999
Q ss_pred EEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcE
Q 007301 387 LFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTI 466 (609)
Q Consensus 387 vf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtv 466 (609)
.|+|.|..|..+|+.+.. .|+ +++.+|+.. .+ ....+ .+ .-...++.|+++. .|+
T Consensus 159 gIIG~G~iG~~iA~~l~~-----~G~-------~V~~~d~~~----~~---~~~~~-~~---g~~~~~l~e~l~~--aDv 213 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKP-----FGV-------QRFLYTGRQ----PR---PEEAA-EF---QAEFVSTPELAAQ--SDF 213 (330)
T ss_dssp EEECCSHHHHHHHHHHGG-----GTC-------CEEEEESSS----CC---HHHHH-TT---TCEECCHHHHHHH--CSE
T ss_pred EEECcCHHHHHHHHHHHH-----CCC-------EEEEECCCC----cc---hhHHH-hc---CceeCCHHHHHhh--CCE
Confidence 999999999999998753 364 588888641 11 11111 01 0011278888886 898
Q ss_pred EEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 467 LIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 467 LIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+|=.-. ..+++++++++.|. +..++.-.|.
T Consensus 214 Vi~~vp~~~~t~~~i~~~~~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 214 IVVACSLTPATEGLCNKDFFQKMK---ETAVFINISR 247 (330)
T ss_dssp EEECCCCCTTTTTCBSHHHHHHSC---TTCEEEECSC
T ss_pred EEEeCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 874431 24678888888875 5567765554
No 79
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=90.81 E-value=0.25 Score=50.04 Aligned_cols=101 Identities=21% Similarity=0.321 Sum_probs=63.4
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc--cC-cccCCCccCCchhcchhccccCCC--CCHHHH
Q 007301 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KG-LIVSSRLESLQHFKKPWAHEHEPV--KELVDA 458 (609)
Q Consensus 385 rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs--~G-Li~~~R~~~L~~~k~~fA~~~~~~--~~L~e~ 458 (609)
||+|.| ||..|..++..|+. .|+ ...++|+|. +- .+.....| |.+... +.++ ..+ .+ .++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~d-l~~~~~-~~~~-~~v~~~~-~~a 67 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAAD-TNHGIA-YDSN-TRVRQGG-YED 67 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHH-HHHHHT-TTCC-CEEEECC-GGG
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHH-HHHHHh-hCCC-cEEEeCC-HHH
Confidence 899999 99999998887754 254 256999997 31 00000011 222111 1111 000 22 566
Q ss_pred HhccCCcEEEEccCCCC---C-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 459 VNAIKPTILIGTSGQGR---T-----------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g---~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++. .|++|=+.+.+. . .+++++++|.+++.+.+|+--|||.
T Consensus 68 ~~~--aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 68 TAG--SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp GTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred hCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 766 899886666543 2 4677889999999999999999997
No 80
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.74 E-value=0.92 Score=46.41 Aligned_cols=111 Identities=13% Similarity=0.175 Sum_probs=70.6
Q ss_pred HHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc--
Q 007301 370 LISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-- 447 (609)
Q Consensus 370 ll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-- 447 (609)
.+++-.+..+ ...+++|+|+|..|-.+++.+... .++ ++|+++|+. +.+ .+.+.+.+
T Consensus 110 ~laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~---~la~~l~~~~ 168 (313)
T 3hdj_A 110 VLAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASP---EILERIGRRC 168 (313)
T ss_dssp HHHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCH---HHHHHHHHHH
T ss_pred HHHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHH---HHHHHHHHhc
Confidence 3444444332 457999999999998888776543 233 789999986 212 22222221
Q ss_pred --ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCcEEEecCC--CCCCCCCCHHHH
Q 007301 448 --EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTAEEA 511 (609)
Q Consensus 448 --~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~e~A 511 (609)
+.... ++.|+++. .|++|-+.... -+|..+.+ .+..+|..++. |. +-|+.++-.
T Consensus 169 g~~~~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 169 GVPARMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp TSCEEEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred CCeEEEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 11123 89999987 99999765433 25554443 36778888876 44 589988754
No 81
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.67 E-value=0.25 Score=50.28 Aligned_cols=105 Identities=16% Similarity=0.260 Sum_probs=62.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC-CCHHHHHhcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~-~~L~e~V~~v 462 (609)
.||.|+|||..|.++|-.+... |+ ...++++|.+--..+.....|.+. .++......+ .+..++++.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5899999999999999766542 54 257999998521111000012111 1111100000 123466665
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 463 KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 463 kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+.. .-+++++.|.++++.-++|=.|||.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch
Confidence 8988866554431 2356788888888888888889997
No 82
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.30 E-value=0.39 Score=47.36 Aligned_cols=37 Identities=30% Similarity=0.409 Sum_probs=32.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d 61 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDD 61 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 46788999999999999999988764 76 799999986
No 83
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=90.09 E-value=6.8 Score=41.98 Aligned_cols=193 Identities=15% Similarity=0.201 Sum_probs=117.9
Q ss_pred cCCCeeeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (609)
Q Consensus 349 r~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~ 407 (609)
+..+++||--- ..+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 45788888643 34555678888888763 24678999999999999999999987543
Q ss_pred HhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 007301 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 483 (609)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 483 (609)
|+ +++.+|+.. ..... -+ ....+|.|+++. .|+++=.- ...+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~--------~~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSD--------KLQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTC--------CCCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcc--------hhccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 65 688888741 11110 01 123689999987 89988432 133789999999
Q ss_pred HHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCC-CC--ccccCCeecCC-CCCcccccchhhhHHHHHhC
Q 007301 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSP-FD--PFEYGDNVFVP-GQANNAYIFPGLGLGLIMSG 559 (609)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSP-F~--pv~~~G~~~~p-~Q~NN~yiFPGlglG~l~s~ 559 (609)
.|. +..++.=.|.-..--|---.+|+ .+|+.- +.|.. |+ |..-+.....| -+..|+.+-|=+|-...-++
T Consensus 233 ~mk---~gailIN~aRG~vvd~~aL~~aL--~~g~i~-gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~ 306 (416)
T 3k5p_A 233 KMK---KGAFLINNARGSDVDLEALAKVL--QEGHLA-GAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQ 306 (416)
T ss_dssp HSC---TTEEEEECSCTTSBCHHHHHHHH--HTTSEE-EEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHH
T ss_pred hCC---CCcEEEECCCChhhhHHHHHHHH--HcCCcc-EEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHH
Confidence 996 77888888774322222222333 346543 22222 21 11101000011 24578999998774433322
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007301 560 AIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 560 a~~Itd~M~laAA~aLA~~v~ 580 (609)
+.|...+++.|.+++.
T Consensus 307 -----~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 307 -----ERIGTEVTRKLVEYSD 322 (416)
T ss_dssp -----HHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHh
Confidence 5566777777777663
No 84
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.98 E-value=0.61 Score=41.64 Aligned_cols=102 Identities=12% Similarity=0.168 Sum_probs=53.0
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc-hhcchhcc-ccCCCCCHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 456 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 456 (609)
+.+...+|+|+|+|..|..+|+.+.. .| .+++++|++ ..+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~-----~g-------~~V~vid~~----~~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASS-----SG-------HSVVVVDKN----EYAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC----GGGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC----HHHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 44567899999999999999888754 25 368889874 12211122 11111111 111111233
Q ss_pred HH-HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 457 DA-VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 457 e~-V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
++ ++ ++|++|-+.... ..+..+++.+...+....|++.+|
T Consensus 79 ~~~~~--~ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGME--KADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGG--GCSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCcc--cCCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 22 33 489998776543 233334443333355555555554
No 85
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.72 E-value=4.1 Score=41.45 Aligned_cols=184 Identities=20% Similarity=0.209 Sum_probs=108.9
Q ss_pred cCCCeeeecCCcc---hHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQG---TASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIAL 404 (609)
Q Consensus 349 r~~~~~FNDDiQG---TaaV~LAgll~Alr~~---------------------g~~L~d~rivf~GAGsAg~GIA~li~~ 404 (609)
+..+.+.|----. +|=-+++.+|+..|.. +..+.+.+|.|+|.|..|..+|+.+..
T Consensus 86 ~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~ 165 (311)
T 2cuk_A 86 ERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALA 165 (311)
T ss_dssp TTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred hCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHH
Confidence 3457777754323 3444788888876632 456889999999999999999998864
Q ss_pred HHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHH
Q 007301 405 EISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKE 480 (609)
Q Consensus 405 ~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~e 480 (609)
.|+ +++.+|+.. . ... + ...+|.|+++. .|+++=.- ...++++++
T Consensus 166 -----~G~-------~V~~~d~~~----~---~~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~ 214 (311)
T 2cuk_A 166 -----FGM-------RVVYHARTP----K---PLP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRE 214 (311)
T ss_dssp -----TTC-------EEEEECSSC----C---SSS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHH
T ss_pred -----CCC-------EEEEECCCC----c---ccc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHH
Confidence 264 588888741 1 111 1 13578999987 89988652 234688888
Q ss_pred HHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe----cC-CCCCccccCCeecCCCCCcccccchhhhHHH
Q 007301 481 VVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA----SG-SPFDPFEYGDNVFVPGQANNAYIFPGLGLGL 555 (609)
Q Consensus 481 vv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifA----SG-SPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~ 555 (609)
.++.|. +..++.=.|.-..--|..-.+|++ |+.--| .+ -|.+. +. .. =+..|..+-|=++-..
T Consensus 215 ~l~~mk---~ga~lin~srg~~vd~~aL~~aL~---g~i~ga~lDv~~~eP~~~---~~-~L--~~~~nviltPh~~~~t 282 (311)
T 2cuk_A 215 RLFAMK---RGAILLNTARGALVDTEALVEALR---GHLFGAGLDVTDPEPLPP---GH-PL--YALPNAVITPHIGSAG 282 (311)
T ss_dssp HHTTSC---TTCEEEECSCGGGBCHHHHHHHHT---TTSSEEEESSCSSSSCCT---TS-GG--GGCTTEEECCSCTTCB
T ss_pred HHhhCC---CCcEEEECCCCCccCHHHHHHHHh---CcCCEEEEeeCCCCCCCC---CC-hh--hhCCCEEECCcCCCCC
Confidence 888775 677888888733112212233333 332111 11 12211 11 01 1345888888776322
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccC
Q 007301 556 IMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 556 l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
.-+ ...|...+++.|.....
T Consensus 283 ~~~-----~~~~~~~~~~nl~~~~~ 302 (311)
T 2cuk_A 283 RTT-----RERMAEVAVENLLAVLE 302 (311)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHT
T ss_pred HHH-----HHHHHHHHHHHHHHHHc
Confidence 111 24566667777766654
No 86
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.61 E-value=0.23 Score=50.94 Aligned_cols=123 Identities=15% Similarity=0.269 Sum_probs=73.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCCC---CCHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 456 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~ 456 (609)
.||.|+|||+.|.++|.+++. .|+ -.++|+|.+ .++-+ .+.+...++.. ...+ .++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~-----~g~------~~V~L~Di~----~~~l~~~~~~l~~~~~~~~~-~~~i~~t~d~- 77 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ-----KDL------GDVYMFDII----EGVPQGKALDLNHCMALIGS-PAKIFGENNY- 77 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC------CEEEEECSS----TTHHHHHHHHHHHHHHHHTC-CCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECC----HHHHHHHHHHHHhHhhccCC-CCEEEECCCH-
Confidence 589999999999999987765 264 139999985 22111 11111111111 1111 456
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccc--cCcEE
Q 007301 457 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS--QGRAI 520 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT--~Grai 520 (609)
++++. .|++|=+.+.+ |. .-+++.+.+.++++.-+|+=-|||..- ..+-+.+.+ .-.-+
T Consensus 78 ~al~~--aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rv 152 (328)
T 2hjr_A 78 EYLQN--SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKV 152 (328)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGE
T ss_pred HHHCC--CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhE
Confidence 77876 89888554333 21 145678888888888887667999843 234444433 23446
Q ss_pred EecCCCCC
Q 007301 521 FASGSPFD 528 (609)
Q Consensus 521 fASGSPF~ 528 (609)
|++|++.+
T Consensus 153 iG~~t~Ld 160 (328)
T 2hjr_A 153 CGMSGVLD 160 (328)
T ss_dssp EESCHHHH
T ss_pred EEeCcHHH
Confidence 77776655
No 87
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.60 E-value=0.26 Score=50.72 Aligned_cols=106 Identities=17% Similarity=0.263 Sum_probs=64.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
..||.|+|||+.|..+|-+|+.. ++ -..++|+|.+-=-.+.-..+|.+.. +|.++..-..+-.++++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHHH-HhcCCeEEEECCHHHhCC-
Confidence 36999999999999988876542 44 2689999984100000000122211 232210000133566777
Q ss_pred CCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 463 KPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 463 kPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+..- -+++++.|.+++..-+|+-.|||.
T Consensus 77 -aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 128 (326)
T 2zqz_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV 128 (326)
T ss_dssp -CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 89998666555321 245677778889999999999998
No 88
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.54 E-value=0.28 Score=53.53 Aligned_cols=124 Identities=15% Similarity=0.184 Sum_probs=74.1
Q ss_pred CceEEEeCcchHH--HHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-c--ccCC---CCC
Q 007301 383 DQRFLFLGAGEAG--TGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H--EHEP---VKE 454 (609)
Q Consensus 383 d~rivf~GAGsAg--~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~--~~~~---~~~ 454 (609)
..||.|+|||+.| .++|..|+.. .++ +-..++|+|.+- ++.+........+. + .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 4689999999964 4446666531 121 136799999852 21111111111111 1 0111 247
Q ss_pred HHHHHhccCCcEEEEccCCC---------------CCCC-------------------------HHHHHHHHccCCCcEE
Q 007301 455 LVDAVNAIKPTILIGTSGQG---------------RTFT-------------------------KEVVEAMASLNEKPII 494 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~---------------g~Ft-------------------------~evv~~Ma~~~erPII 494 (609)
+.++++. .|++|=..+++ |.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 89888555331 3333 6899999999999999
Q ss_pred EecCCCCCCCCCCHHHHhccccCcEEEecC
Q 007301 495 FSLSNPTSQSECTAEEAYTWSQGRAIFASG 524 (609)
Q Consensus 495 FaLSNPt~~aEct~e~A~~wT~GraifASG 524 (609)
+-.|||. . +..+-+.++..-| +|.+|
T Consensus 149 i~~TNPv--d-i~t~~~~k~p~~r-viG~c 174 (480)
T 1obb_A 149 LQAANPI--F-EGTTLVTRTVPIK-AVGFC 174 (480)
T ss_dssp EECSSCH--H-HHHHHHHHHSCSE-EEEEC
T ss_pred EEeCCcH--H-HHHHHHHHCCCCc-EEecC
Confidence 9999998 2 3334445554444 45443
No 89
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.49 E-value=0.43 Score=48.85 Aligned_cols=123 Identities=20% Similarity=0.251 Sum_probs=73.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCCC---CCHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELV 456 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~ 456 (609)
.||.|+|||+.|.++|.+++.. |+ + .++|+|.+ .++-+ .+.+.. .+......+ .++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~----~--~v~L~Di~----~~~l~~~~~~l~~~~-~~~~~~~~i~~t~d~- 67 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL----G--DVVLFDIV----KNMPHGKALDTSHTN-VMAYSNCKVSGSNTY- 67 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS----SSHHHHHHHHHHTHH-HHHTCCCCEEEECCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCC----HHHHHHHHHHHHhhh-hhcCCCcEEEECCCH-
Confidence 4899999999999999888753 65 1 29999975 22211 111111 111101111 466
Q ss_pred HHHhccCCcEEEEccCCC---CC----------------CCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccc--
Q 007301 457 DAVNAIKPTILIGTSGQG---RT----------------FTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWS-- 515 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT-- 515 (609)
++++. .|++|=+.+.+ |. .-+++.+.|.++++.-+|+=.|||..-. .+-+.+.+
T Consensus 68 ~al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~---t~~~~~~~g~ 142 (322)
T 1t2d_A 68 DDLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVM---VQLLHQHSGV 142 (322)
T ss_dssp GGGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHH---HHHHHHHHCC
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHH---HHHHHHhcCC
Confidence 77876 89888664333 21 3467888888889888877779998432 33444433
Q ss_pred cCcEEEecCCCCC
Q 007301 516 QGRAIFASGSPFD 528 (609)
Q Consensus 516 ~GraifASGSPF~ 528 (609)
.-.-+|++|...+
T Consensus 143 ~~~rviG~gt~ld 155 (322)
T 1t2d_A 143 PKNKIIGLGGVLD 155 (322)
T ss_dssp CGGGEEECCHHHH
T ss_pred ChHHEEeccCccc
Confidence 2334666654433
No 90
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.47 E-value=0.96 Score=45.74 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=64.5
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
++.+++..+. +....+|.|+|+|..|..++..+... .|+ ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3455554332 45667999999999999998887653 253 578888863 111 2222211110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCC-CCCCCHHHHHHHHccCCCcEEEecCC--CCCCCCCCH
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQ-GRTFTKEVVEAMASLNEKPIIFSLSN--PTSQSECTA 508 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~aEct~ 508 (609)
......++.|+++. +|++|=+... ..+|.++ ...+.-+|+.+|. |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999986 8988854321 2233331 2235568888753 43 355544
No 91
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.25 E-value=1.5 Score=43.40 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=54.8
Q ss_pred eecCCCCcHHHHHHHHcC------CCeeeecCCcchHHHHHHHHHHHHHHh-CCCCCCceEEEeC-cchHHHHHHHHHHH
Q 007301 333 FEDFANHNAFDLLEKYGT------THLVFNDDIQGTASVVLAGLISAMKFL-GGSLADQRFLFLG-AGEAGTGIAELIAL 404 (609)
Q Consensus 333 fEDf~~~nAf~lL~ryr~------~~~~FNDDiQGTaaV~LAgll~Alr~~-g~~L~d~rivf~G-AGsAg~GIA~li~~ 404 (609)
++-+.-..+.+++++-+. +..+|. |..|.- .--.|++.+++.. +.++++.+++|.| +|.+|.++|..+.+
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~~-~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCML-DSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEEE-CSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEec-CCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 444444567777776652 233443 445532 3456777888777 7889999999999 89888888887765
Q ss_pred HHHHhcCCCHhhhcCcEEEEccc
Q 007301 405 EISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 405 ~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.|. +++++|++
T Consensus 142 -----~G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 -----EGA-------EVVLCGRK 152 (287)
T ss_dssp -----TTC-------EEEEEESS
T ss_pred -----CcC-------EEEEEECC
Confidence 363 38888874
No 92
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=89.19 E-value=1.1 Score=45.66 Aligned_cols=112 Identities=20% Similarity=0.199 Sum_probs=67.9
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
++.+++..+.. ....++.|+|+|..|-.+++.+... .++ ++++++|+. .+| ...+.+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999998888777653 233 678888873 222 2233333321
Q ss_pred ---ccCCCCCHHHHHhccCCcEEEEccCCC-CCCCHHHHHHHHccCCCcEEEecC--CCCCCCCCCHH
Q 007301 448 ---EHEPVKELVDAVNAIKPTILIGTSGQG-RTFTKEVVEAMASLNEKPIIFSLS--NPTSQSECTAE 509 (609)
Q Consensus 448 ---~~~~~~~L~e~V~~vkPtvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~aEct~e 509 (609)
+.. ..++.|++ . .|++|=++..+ -+|..+.+ .+.-.|+.++ +|. +-|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899988 4 89998765432 23433322 3566888883 455 6788764
No 93
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.19 E-value=3 Score=42.74 Aligned_cols=137 Identities=10% Similarity=0.106 Sum_probs=89.5
Q ss_pred eeeecCCCCcHHHHHHHHcCCCeeeecCCcc---hHHHHHHHHHHHHHH-------------------hCCCCCCceEEE
Q 007301 331 IQFEDFANHNAFDLLEKYGTTHLVFNDDIQG---TASVVLAGLISAMKF-------------------LGGSLADQRFLF 388 (609)
Q Consensus 331 IqfEDf~~~nAf~lL~ryr~~~~~FNDDiQG---TaaV~LAgll~Alr~-------------------~g~~L~d~rivf 388 (609)
|+.--.+..|- ++-.--+..+.+.|---.. +|=-+++.+|+..|. .+..|.+.++.|
T Consensus 73 I~~~~~G~d~i-d~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 73 ILTRTAGTDHI-DKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEESSSCCTTB-CHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEcccccccc-CHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 66555555542 2222223567777754333 344478888888761 134688899999
Q ss_pred eCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEE
Q 007301 389 LGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILI 468 (609)
Q Consensus 389 ~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLI 468 (609)
+|.|..|..+|+.+.. .|+ +++.+|+.. .. .+ + .++. ..+|.|+++. .|+++
T Consensus 152 iG~G~IG~~~A~~l~~-----~G~-------~V~~~d~~~----~~--~~---~-~~~~----~~~l~ell~~--aDvV~ 203 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHG-----MGA-------TVIGEDVFE----IK--GI---E-DYCT----QVSLDEVLEK--SDIIT 203 (331)
T ss_dssp ECCSHHHHHHHHHHHH-----TTC-------EEEEECSSC----CC--SC---T-TTCE----ECCHHHHHHH--CSEEE
T ss_pred ECcCHHHHHHHHHHHH-----CCC-------EEEEECCCc----cH--HH---H-hccc----cCCHHHHHhh--CCEEE
Confidence 9999999999998864 264 588888742 11 11 1 1111 2379999986 89988
Q ss_pred Ecc----CCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 469 GTS----GQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 469 G~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
=.- ...++|+++.++.|. +..++.=.|.
T Consensus 204 ~~~p~t~~t~~li~~~~l~~mk---~ga~lin~sr 235 (331)
T 1xdw_A 204 IHAPYIKENGAVVTRDFLKKMK---DGAILVNCAR 235 (331)
T ss_dssp ECCCCCTTTCCSBCHHHHHTSC---TTEEEEECSC
T ss_pred EecCCchHHHHHhCHHHHhhCC---CCcEEEECCC
Confidence 641 234789999999886 6678887774
No 94
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.16 E-value=2.1 Score=41.03 Aligned_cols=92 Identities=12% Similarity=0.233 Sum_probs=51.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
..||.|+|+|..|..+|..+... |.. ...+++++|++ .++ +. + .-..++.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~----~~~------~g---~---~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPS----KKN------TT---L---NYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSS----CCS------SS---S---EECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCC----ccc------Cc---e---EEeCCHHHHHhc-
Confidence 45899999999999999988654 420 01368888874 111 00 0 001345555554
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
+|++| ++..+ -..+++++.+....+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 56555 22222 245566665554444445556666553
No 95
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=89.04 E-value=2.4 Score=43.79 Aligned_cols=172 Identities=16% Similarity=0.238 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEE
Q 007301 362 TASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIW 422 (609)
Q Consensus 362 TaaV~LAgll~Alr~-------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~ 422 (609)
+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+.. .|+ +++
T Consensus 124 vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~ 191 (333)
T 3ba1_A 124 VADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAVAERAEA-----FDC-------PIS 191 (333)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHHHHHHHT-----TTC-------CEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEE
Confidence 444467777777653 2457899999999999999999998754 364 588
Q ss_pred EEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 423 LVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 423 lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.+|+.. . .... + ....+|.|+++. .|+++=.- ...++++++.++.|. +..+|.-.|
T Consensus 192 ~~dr~~----~---~~~g----~----~~~~~l~ell~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~s 251 (333)
T 3ba1_A 192 YFSRSK----K---PNTN----Y----TYYGSVVELASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIG 251 (333)
T ss_dssp EECSSC----C---TTCC----S----EEESCHHHHHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECS
T ss_pred EECCCc----h---hccC----c----eecCCHHHHHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECC
Confidence 888642 1 1110 1 012578898886 89887542 124688899999885 566777666
Q ss_pred CCCCCCCCCHHHHhcc-ccCcEE-----EecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHH
Q 007301 499 NPTSQSECTAEEAYTW-SQGRAI-----FASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAA 572 (609)
Q Consensus 499 NPt~~aEct~e~A~~w-T~Grai-----fASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA 572 (609)
.-. ..+-++.+++ .+|+.- |-.+-|.++ .. -=+..|+.+-|=++-....+ ...|...++
T Consensus 252 rG~---~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-----~~--L~~~~nviltPH~~~~t~e~-----~~~~~~~~~ 316 (333)
T 3ba1_A 252 RGP---HVDEPELVSALVEGRLGGAGLDVFEREPEVP-----EK--LFGLENVVLLPHVGSGTVET-----RKVMADLVV 316 (333)
T ss_dssp CGG---GBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-----GG--GGGCTTEEECSSCTTCSHHH-----HHHHHHHHH
T ss_pred CCc---hhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-----ch--hhcCCCEEECCcCCCCCHHH-----HHHHHHHHH
Confidence 533 2222222222 234321 112223211 11 11345777888766322211 245666666
Q ss_pred HHHHcccC
Q 007301 573 EALAGQVT 580 (609)
Q Consensus 573 ~aLA~~v~ 580 (609)
+.|.....
T Consensus 317 ~nl~~~~~ 324 (333)
T 3ba1_A 317 GNLEAHFS 324 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666654
No 96
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.02 E-value=0.42 Score=49.77 Aligned_cols=95 Identities=17% Similarity=0.297 Sum_probs=61.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc----cCCCCCH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE----HEPVKEL 455 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~----~~~~~~L 455 (609)
.+...+++|+|+|..|..+|+.+.. .|. +++.+|+. ..| +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~-----~Ga-------~V~~~d~~----~~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANG-----MGA-------TVTVLDIN----IDK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHh-----CCC-------EEEEEeCC----HHH---HHHHHHhcCCeeEeccCCHHHH
Confidence 4788999999999999999988754 363 58888874 111 21111111110 0112357
Q ss_pred HHHHhccCCcEEEEccCCC-----CCCCHHHHHHHHccCCCcEEEecC
Q 007301 456 VDAVNAIKPTILIGTSGQG-----RTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.+.++. .|++|.+.+.+ .+++++.++.|. +.-+|.=+|
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va 268 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIA 268 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEe
Confidence 788875 89999876554 457899998885 445666566
No 97
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=89.02 E-value=2.8 Score=42.59 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEE
Q 007301 362 TASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL 423 (609)
Q Consensus 362 TaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~l 423 (609)
+|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+.. .|+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-----~G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANA-----LGM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHH-----CCC-------EEEE
Confidence 444478888887763 2457899999999999999999998864 264 6888
Q ss_pred EcccCcccCCCccCCchhcchhccc-cCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 424 VDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 424 vDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|+.. . . ..+.+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +.-++.=.|
T Consensus 171 ~d~~~----~------~---~~~~~~g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~a 232 (307)
T 1wwk_A 171 YDPYP----N------E---ERAKEVNGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTS 232 (307)
T ss_dssp ECSSC----C------H---HHHHHTTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECS
T ss_pred ECCCC----C------h---hhHhhcCccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECC
Confidence 88741 1 1 01111 1112378898886 898885421 34688999999886 567888777
Q ss_pred C
Q 007301 499 N 499 (609)
Q Consensus 499 N 499 (609)
.
T Consensus 233 r 233 (307)
T 1wwk_A 233 R 233 (307)
T ss_dssp C
T ss_pred C
Confidence 6
No 98
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.89 E-value=0.32 Score=49.80 Aligned_cols=105 Identities=14% Similarity=0.229 Sum_probs=63.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|||+.|..+|-+++.. ++ -..++|+|.+-=-.+.-...|.+.. +|.++..-..+-.++++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~~-~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDAQ-AFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGGG-GGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHHH-HhcCCeEEEECCHHHhCC--
Confidence 5999999999999988876543 44 2689999974100000000122211 232211000133566776
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 464 PTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 464 PtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 124 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV 124 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH
Confidence 8998866554422 1245677778899999999999998
No 99
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.75 E-value=2.7 Score=43.72 Aligned_cols=190 Identities=15% Similarity=0.152 Sum_probs=112.5
Q ss_pred CCCeeeecCC---cchHHHHHHHHHHHHHHh---------------------CCCCCCceEEEeCcchHHHHHHHHHHHH
Q 007301 350 TTHLVFNDDI---QGTASVVLAGLISAMKFL---------------------GGSLADQRFLFLGAGEAGTGIAELIALE 405 (609)
Q Consensus 350 ~~~~~FNDDi---QGTaaV~LAgll~Alr~~---------------------g~~L~d~rivf~GAGsAg~GIA~li~~~ 405 (609)
..+++.|--- +.+|=-+++-+|+..|.. |..|.+.++.|+|.|..|..+|+.+..
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~- 194 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARG- 194 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHT-
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHH-
Confidence 4566666432 235556788888877632 567899999999999999999998864
Q ss_pred HHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHH
Q 007301 406 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEV 481 (609)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~ev 481 (609)
.|+ +++.+|+... ... .+.......+|.|+++. .|+++=.-- ..++|+++.
T Consensus 195 ----~G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 195 ----FGL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp ----TTC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred ----CCC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 264 6888887421 000 01111112589999986 898884432 237899999
Q ss_pred HHHHHccCCCcEEEecCCCCCCCCCCHHHHhc--cccCcEEEecCCC-CCccccCCeecCCCCCcccccchhhhHHHHHh
Q 007301 482 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYT--WSQGRAIFASGSP-FDPFEYGDNVFVPGQANNAYIFPGLGLGLIMS 558 (609)
Q Consensus 482 v~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~--wT~GraifASGSP-F~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s 558 (609)
++.|. +..|+.=.|.- ++--|+|+. ..+|+.-.| |.. |++ +- .....-=+..|+.+-|=+|-...-+
T Consensus 250 l~~mk---~gailIN~aRG----~~vde~aL~~aL~~g~i~gA-~LDVf~~-EP-~~~~pL~~~~nvilTPHia~~t~e~ 319 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRG----DLINDDALIEALRSKHLFAA-GLDVFAN-EP-AIDPRYRSLDNIFLTPHIGSATHET 319 (345)
T ss_dssp HHHSC---TTEEEEECSCG----GGBCHHHHHHHHHHTSEEEE-EESCCTT-TT-SCCTTGGGCTTEEECCSCTTCBHHH
T ss_pred HhhCC---CCcEEEECCCC----chhCHHHHHHHHHhCCceEE-EecCCCC-CC-CCCchHHhCCCEEEcCccCcCCHHH
Confidence 99996 67788877753 333333322 134654332 211 110 00 0001112456889999776422221
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 007301 559 GAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 559 ~a~~Itd~M~laAA~aLA~~v~ 580 (609)
-+.|...+++-|.....
T Consensus 320 -----~~~~~~~~~~ni~~~l~ 336 (345)
T 4g2n_A 320 -----RDAMGWLLIQGIEALNQ 336 (345)
T ss_dssp -----HHHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHHHc
Confidence 25566667777766654
No 100
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.75 E-value=0.47 Score=48.18 Aligned_cols=101 Identities=18% Similarity=0.357 Sum_probs=61.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC----Cchhcchhcccc-CCCCCHHHHH
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHEH-EPVKELVDAV 459 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~----L~~~k~~fA~~~-~~~~~L~e~V 459 (609)
||.|+|||..|.++|..++.. |. ...++++|.+- ++.+. +.+.. ++.... -...+. +++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~~-~~~~~~~i~~~d~-~~~ 65 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHGT-PFTRRANIYAGDY-ADL 65 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHG-GGSCCCEEEECCG-GGG
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhhh-hhcCCcEEEeCCH-HHh
Confidence 799999999999999887653 54 14799999751 11010 11100 111000 001233 456
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCCCC
Q 007301 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPTSQ 503 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~ 503 (609)
+. .|++|=+-..+.. .-+++++.|.++++.-+|+-.|||...
T Consensus 66 ~~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 66 KG--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDV 121 (319)
T ss_dssp TT--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHH
T ss_pred CC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHH
Confidence 54 8888755444431 126888899888888788889999843
No 101
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.71 E-value=0.44 Score=49.94 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCC
Confidence 57889999999999999999999875 76 799999986
No 102
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.64 E-value=0.4 Score=48.86 Aligned_cols=107 Identities=15% Similarity=0.266 Sum_probs=65.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC-CCHHHHHh
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV-KELVDAVN 460 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~-~~L~e~V~ 460 (609)
...||.|+|||..|..+|-.|+.. |+ -..++|+|.+-=..+.....|.+. .+|....-.. .+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999988876542 54 268999997510000000012222 2333110011 13356777
Q ss_pred ccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 461 AIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
. .|++|=+.+.+..- =+++++.|.+++..-+|+-.|||.
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV 126 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 6 89988665555321 245777788889999999999997
No 103
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.63 E-value=0.44 Score=48.61 Aligned_cols=100 Identities=22% Similarity=0.343 Sum_probs=61.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccC-CCCCHHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHE-PVKELVDA 458 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~-~~~~L~e~ 458 (609)
.||.|+|||..|..+|-+++. .|+ -..++|+|.+ .+|.+ .|.+.. +|.++.. ...+ .++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~-----~~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~-~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL-----RQT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGD-YSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--C-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECC-HHH
Confidence 589999999999998887654 254 2589999975 22211 121111 2221100 0123 456
Q ss_pred HhccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 459 VNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++. .|++|=+.+.+..- -+++++.|.+++..-+|+=.|||.
T Consensus 72 ~~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv 126 (318)
T 1y6j_A 72 VKD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV 126 (318)
T ss_dssp GTT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH
T ss_pred hCC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH
Confidence 766 89988655544311 168889999999999999999997
No 104
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.55 E-value=0.35 Score=41.32 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=52.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHH-
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA- 458 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~- 458 (609)
++..+|+|+|+|..|..+|+.+.. .| .+++++|++- ++.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~-----~g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHR-----MG-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHH-----TT-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 456789999999999999888754 25 3577888741 111112111111111 11111122222
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 22 589998665432011233444444455566766666665
No 105
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.55 E-value=0.13 Score=50.93 Aligned_cols=32 Identities=25% Similarity=0.301 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999988753 64 68888874
No 106
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.45 E-value=1.4 Score=45.64 Aligned_cols=38 Identities=24% Similarity=0.534 Sum_probs=33.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D 151 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDND 151 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCC
Confidence 357789999999999999999999876 76 799999986
No 107
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.27 E-value=0.87 Score=49.15 Aligned_cols=102 Identities=12% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 458 (609)
.++..+|.|+|+|..|..+|..|... |. +++++|+. .+ ..+...+.+.. ......++.|+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~ 72 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEF 72 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHH
Confidence 35678999999999999999988753 63 57777763 11 12111111100 01123578888
Q ss_pred Hhcc-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 459 VNAI-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
++.. +||++| ++-+.+...+++++.+...- +..||.-+||-.
T Consensus 73 v~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 73 VESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred HhCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 8753 478777 44445456888888887544 456888888854
No 108
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=88.24 E-value=2.6 Score=43.91 Aligned_cols=196 Identities=14% Similarity=0.079 Sum_probs=112.3
Q ss_pred cCCCeeeecCCc---chHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQ---GTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 405 (609)
Q Consensus 349 r~~~~~FNDDiQ---GTaaV~LAgll~Alr~--------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~ 405 (609)
+..+.+.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 107 ~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~- 185 (351)
T 3jtm_A 107 AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKP- 185 (351)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHH-
Confidence 346677664322 3444578888887753 2567999999999999999999998864
Q ss_pred HHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHH
Q 007301 406 ISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEV 481 (609)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~ev 481 (609)
.|+ +++.+|+... . ....+.. ......+|.|+++. .|+++=.- ...++|+++.
T Consensus 186 ----~G~-------~V~~~dr~~~----~---~~~~~~~---g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~ 242 (351)
T 3jtm_A 186 ----FGC-------NLLYHDRLQM----A---PELEKET---GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKEL 242 (351)
T ss_dssp ----GCC-------EEEEECSSCC----C---HHHHHHH---CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEeCCCcc----C---HHHHHhC---CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHH
Confidence 265 4787886421 0 1111000 01123589999987 89988432 3346899999
Q ss_pred HHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeecCCCCCcccccchhhhHHHHHhCC
Q 007301 482 VEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGA 560 (609)
Q Consensus 482 v~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~s~a 560 (609)
++.|. +..+|.=.|.-..--|---.+|+ .+|+.-.|.--=|++--. .... --+..|+.+-|=++-....+.
T Consensus 243 l~~mk---~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EP~~~~~p--L~~~~nvilTPHia~~t~ea~- 314 (351)
T 3jtm_A 243 IGKLK---KGVLIVNNARGAIMERQAVVDAV--ESGHIGGYSGDVWDPQPAPKDHP--WRYMPNQAMTPHTSGTTIDAQ- 314 (351)
T ss_dssp HHHSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTCG--GGTSTTBCCCCSCGGGSHHHH-
T ss_pred HhcCC---CCCEEEECcCchhhCHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCh--hhcCCCEEECCcCCCCCHHHH-
Confidence 99996 77788877763322222222333 346654333222221100 0110 013568888888764433333
Q ss_pred cccCHHHHHHHHHHHHcccC
Q 007301 561 IRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 561 ~~Itd~M~laAA~aLA~~v~ 580 (609)
..|...+++-|.....
T Consensus 315 ----~~~~~~~~~nl~~~~~ 330 (351)
T 3jtm_A 315 ----LRYAAGTKDMLERYFK 330 (351)
T ss_dssp ----HHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHc
Confidence 2344444555555443
No 109
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=87.93 E-value=2.2 Score=44.48 Aligned_cols=144 Identities=14% Similarity=0.178 Sum_probs=91.7
Q ss_pred eeeeecCCCCcH-HHHHHHHcCCCeeeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCce
Q 007301 330 LIQFEDFANHNA-FDLLEKYGTTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQR 385 (609)
Q Consensus 330 lIqfEDf~~~nA-f~lL~ryr~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~L~d~r 385 (609)
+|+.-..+..|- .+.+.+.+..+.+.|--- +.+|=-+++.+|+..|. .+..|.+.+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 367666666653 233333333677777533 23444478888888762 366899999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCc
Q 007301 386 FLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPT 465 (609)
Q Consensus 386 ivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPt 465 (609)
|.|+|.|..|..+|+.+.. .|+ ++++.+|+... .....+ .+ ......+|.|+++. .|
T Consensus 167 vgIIG~G~IG~~vA~~l~~-----~G~------~~V~~~d~~~~-------~~~~~~-~~--g~~~~~~l~ell~~--aD 223 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVP-----FNP------KELLYYDYQAL-------PKDAEE-KV--GARRVENIEELVAQ--AD 223 (364)
T ss_dssp EEEECCSHHHHHHHHHHGG-----GCC------SEEEEECSSCC-------CHHHHH-HT--TEEECSSHHHHHHT--CS
T ss_pred EEEECcCHHHHHHHHHHHh-----CCC------cEEEEECCCcc-------chhHHH-hc--CcEecCCHHHHHhc--CC
Confidence 9999999999999998753 264 33888886311 011110 00 00112479998885 89
Q ss_pred EEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 466 ILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 466 vLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+++=.-- ..++|+++.++.|. +..+|.-.|.
T Consensus 224 vV~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~ar 258 (364)
T 2j6i_A 224 IVTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTAR 258 (364)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSC
T ss_pred EEEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCC
Confidence 9885432 22689999988886 6678887776
No 110
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.90 E-value=0.32 Score=47.04 Aligned_cols=98 Identities=15% Similarity=0.270 Sum_probs=58.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.+...||.|+|+|..|..+|..+... |. +.++++|++. +.+....+.+ ......++.|++
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~~ 66 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEVN 66 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGSC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHHh
Confidence 45557999999999999999988653 53 2477887631 1121111111 001123566666
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
+. +|++|=+. .... .+++++.+.... +..+|.-+||-.
T Consensus 67 ~~--~Dvvi~av-~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 67 PY--AKLYIVSL-KDSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp SC--CSEEEECC-CHHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred cC--CCEEEEec-CHHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 53 78877433 2322 377888776543 566788787744
No 111
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=87.89 E-value=0.56 Score=47.96 Aligned_cols=104 Identities=21% Similarity=0.299 Sum_probs=65.2
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh-ccccCCCCCHHHHHhc
Q 007301 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-AHEHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-A~~~~~~~~L~e~V~~ 461 (609)
.||+|+| +|..|..++..|+. .|+ ...++++|.+-- .....+|.+...+. .+......++.++++.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999998877643 353 256999996421 00000011110000 0000001257888887
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 462 IKPTILIGTSGQGR--------------TFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 462 vkPtvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+. ..+++++++|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899886665443 24677888888889899999999998
No 112
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.66 E-value=6.2 Score=40.03 Aligned_cols=118 Identities=15% Similarity=0.170 Sum_probs=80.3
Q ss_pred cCCCeeeecC-Ccc--hHHHHHHHHHHHHHHh-----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDD-IQG--TASVVLAGLISAMKFL-----------------GGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (609)
Q Consensus 349 r~~~~~FNDD-iQG--TaaV~LAgll~Alr~~-----------------g~~L~d~rivf~GAGsAg~GIA~li~~~~~~ 408 (609)
+..+++.|-- ... +|=-+++.+|+..|.. ...|.+.++.|+|.|..|..+|+.+..
T Consensus 70 ~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~---- 145 (303)
T 1qp8_A 70 PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAA---- 145 (303)
T ss_dssp CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHH----
T ss_pred hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHH----
Confidence 3467777743 322 2334788888877631 236889999999999999999998764
Q ss_pred hcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 007301 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (609)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 484 (609)
.|+ +++.+|+..- +. ......+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 146 -~G~-------~V~~~dr~~~---------~~-------~~~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~ 199 (303)
T 1qp8_A 146 -LGA-------QVRGFSRTPK---------EG-------PWRFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLAL 199 (303)
T ss_dssp -TTC-------EEEEECSSCC---------CS-------SSCCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred -CCC-------EEEEECCCcc---------cc-------CcccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhh
Confidence 364 5888887421 10 01123578888886 89888553 2346788888888
Q ss_pred HHccCCCcEEEecCC
Q 007301 485 MASLNEKPIIFSLSN 499 (609)
Q Consensus 485 Ma~~~erPIIFaLSN 499 (609)
|. +..++.=.|.
T Consensus 200 mk---~gailin~sr 211 (303)
T 1qp8_A 200 MA---EDAVFVNVGR 211 (303)
T ss_dssp SC---TTCEEEECSC
T ss_pred CC---CCCEEEECCC
Confidence 85 6778887776
No 113
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.56 E-value=1.3 Score=44.74 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=58.1
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH 447 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~ 447 (609)
.|++.+++..| +.+++|+|||.+|.+|+..+.+. | .+|+++++. .+|.+.|. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665533 88999999999998888877653 4 578888874 33322222 1110
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCC----CCCCHHHHH-HHHccCCCcEEEecC
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQG----RTFTKEVVE-AMASLNEKPIIFSLS 498 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS 498 (609)
......+|. ++|++|-++..+ -.+.++.+. .+. +..+++=++
T Consensus 163 ~~~~~~~l~------~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~v 209 (269)
T 3phh_A 163 DCFMEPPKS------AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLA 209 (269)
T ss_dssp EEESSCCSS------CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESC
T ss_pred eEecHHHhc------cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeC
Confidence 001112221 699999776544 147777655 344 456777664
No 114
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.17 E-value=0.55 Score=41.26 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=25.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.|+|+|||.||+..|..|.+ .|+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~-----~G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 49999999999999988876 375 57788863
No 115
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=87.14 E-value=0.53 Score=48.75 Aligned_cols=116 Identities=16% Similarity=0.243 Sum_probs=69.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
..||.++|||..|..+|..|+.. |+ -..+.|+|.+-=..++-.-+|.+.. +|..+..-..+..++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~~-~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDAL-PFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTTG-GGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhhh-hhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888764 54 2589999973100000000132221 332110001223456666
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhcc
Q 007301 463 KPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW 514 (609)
Q Consensus 463 kPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~w 514 (609)
.|++|=+.+.+ | +| -+++++.|.+++...+|+-.|||.. ...+-+++.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvd---i~t~~~~k~ 138 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD---ILTYATWKL 138 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHH---HHHHHHHHH
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchH---HHHHHHHHh
Confidence 88877555443 1 23 3688889999999999999999973 333444444
No 116
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.14 E-value=0.67 Score=44.17 Aligned_cols=93 Identities=14% Similarity=0.196 Sum_probs=57.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEE-EcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~l-vDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
.||.|+|+|..|..+|..+... |. ++.+ +|++ .+.+....+.+- .....+..|+++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~-------~~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG-------PASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC-------GGGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC-------HHHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988653 53 4554 5552 122222222221 0111345566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
+|++| ++.. ....+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp-~~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVP-YDSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESC-GGGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCC-hHHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88877 3333 3456777777765 45669999999884
No 117
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.09 E-value=3.4 Score=42.37 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=88.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
..|.+.+|.|+|.|..|..+|+.+.. .|+ +++.+|+.. .. + ..+..-++ ..+|.|+
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~-----~G~-------~V~~~d~~~----~~-~---~~~~~g~~----~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIP-----FGV-------KLYYWSRHR----KV-N---VEKELKAR----YMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EEEEECSSC----CH-H---HHHHHTEE----ECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch-h---hhhhcCce----ecCHHHH
Confidence 67999999999999999999998753 363 688888741 10 0 00000011 1378888
Q ss_pred HhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhcc-ccCcEEEecCCC-CC--cc
Q 007301 459 VNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTW-SQGRAIFASGSP-FD--PF 530 (609)
Q Consensus 459 V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~w-T~GraifASGSP-F~--pv 530 (609)
++. .|+++=.-. ..++++++.++.|. +. ++.-.|. -.-+..++.++. .+|+.-. .|.- |. |.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr---g~~vd~~aL~~aL~~~~i~g-aglDv~~~EP~ 267 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR---GALVDEKAVTEAIKQGKLKG-YATDVFEKEPV 267 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC---GGGBCHHHHHHHHHTTCBCE-EEESCCSSSSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC---CcccCHHHHHHHHHcCCceE-EEecCCCCCCC
Confidence 886 898874422 23578888888885 55 7766663 222333222222 2343222 2221 11 21
Q ss_pred ccCCeecCCCCCc-ccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccCc
Q 007301 531 EYGDNVFVPGQAN-NAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVTQ 581 (609)
Q Consensus 531 ~~~G~~~~p~Q~N-N~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v~~ 581 (609)
. +... =+.. |..+-|=++-... .-...|...+++.|......
T Consensus 268 ~--~~~L--~~~~~nviltPh~~~~t~-----~~~~~~~~~~~~n~~~~~~g 310 (333)
T 2d0i_A 268 R--EHEL--FKYEWETVLTPHYAGLAL-----EAQEDVGFRAVENLLKVLRG 310 (333)
T ss_dssp S--CCGG--GGCTTTEEECCSCTTCCH-----HHHHHHHHHHHHHHHHHHTT
T ss_pred C--CchH--HcCCCCEEEcCccCCCcH-----HHHHHHHHHHHHHHHHHHcC
Confidence 1 1111 1234 6777776663211 12245666677777776653
No 118
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=87.00 E-value=0.3 Score=52.63 Aligned_cols=127 Identities=14% Similarity=0.258 Sum_probs=75.9
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc--c-cCC---CCCHH
Q 007301 384 QRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH--E-HEP---VKELV 456 (609)
Q Consensus 384 ~rivf~GAGsA-g~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~--~-~~~---~~~L~ 456 (609)
.||.|+|||+. |.+++..|+.. ..+++ -..++|+|.+-- ++|.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 367999998520 0211111111112211 1 111 14788
Q ss_pred HHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
|+++. .|++|=..++++. .-+++++.|.++|+.-+|+=.|||..
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvd 156 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAG 156 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 99997 9999876665431 13588899999999999999999982
Q ss_pred CCCCCHHHHhccccCcEEEecC
Q 007301 503 QSECTAEEAYTWSQGRAIFASG 524 (609)
Q Consensus 503 ~aEct~e~A~~wT~GraifASG 524 (609)
+..+-+++.+.-.-+|.+|
T Consensus 157 ---ivT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 157 ---MVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp ---HHHHHHHHHCCCCCEEECC
T ss_pred ---HHHHHHHHhCCCCCEEEeC
Confidence 2334445556332455554
No 119
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.99 E-value=1.7 Score=45.20 Aligned_cols=95 Identities=13% Similarity=0.240 Sum_probs=61.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCCCHHHHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V 459 (609)
++..||.|+|.|..|..+|..|... | -+++++|+. .+ .++ .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~---~~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VN---AVQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HH---HHH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HH---HHH----HHHHCCCEEeCCHHHHH
Confidence 4567999999999999999988763 5 357777763 11 111 12211 12236888988
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCC
Q 007301 460 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNP 500 (609)
Q Consensus 460 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNP 500 (609)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 568877 333333 678888887654 356688878773
No 120
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.83 E-value=2.2 Score=44.81 Aligned_cols=179 Identities=13% Similarity=0.041 Sum_probs=103.8
Q ss_pred chHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcC
Q 007301 361 GTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRK 419 (609)
Q Consensus 361 GTaaV~LAgll~Alr~---------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~ 419 (609)
.+|=-+++-+|+..|- .+..|.+.++.|+|.|..|..+|+.+.. .|+
T Consensus 133 ~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~------- 200 (365)
T 4hy3_A 133 PVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA------- 200 (365)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------
Confidence 3455577777777662 2346889999999999999999997743 364
Q ss_pred cEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 420 KIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 420 ~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+++.+|+.. . ... .....-...+|.|+++. .|+++=. ....++|+++.++.|. +..++.
T Consensus 201 ~V~~~d~~~----~----~~~----~~~~g~~~~~l~ell~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailI 263 (365)
T 4hy3_A 201 RIRVFDPWL----P----RSM----LEENGVEPASLEDVLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFI 263 (365)
T ss_dssp EEEEECSSS----C----HHH----HHHTTCEECCHHHHHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEE
T ss_pred EEEEECCCC----C----HHH----HhhcCeeeCCHHHHHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEE
Confidence 577787641 1 000 00111112579999987 9999843 3345789999999996 677888
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecC----CCCCcccccchhhhHHHHHhCCcccCHHHHHHH
Q 007301 496 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFV----PGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAA 571 (609)
Q Consensus 496 aLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~----p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laA 571 (609)
=.|.-..--|---.+|+ .+|+.- | |. +|.- ..... -=+..|+.+-|=+|-...-+ -+.|...+
T Consensus 264 N~aRG~~vde~aL~~aL--~~g~i~-a-aL---DV~~-~EPl~~~~pL~~~~nvilTPHia~~t~e~-----~~~~~~~~ 330 (365)
T 4hy3_A 264 LLSRADVVDFDALMAAV--SSGHIV-A-AS---DVYP-EEPLPLDHPVRSLKGFIRSAHRAGALDSA-----FKKMGDMV 330 (365)
T ss_dssp ECSCGGGSCHHHHHHHH--HTTSSE-E-EE---SCCS-SSSCCTTCGGGTCTTEEECCSCSSCCHHH-----HHHHHHHH
T ss_pred ECcCCchhCHHHHHHHH--HcCCce-E-Ee---eCCC-CCCCCCCChhhcCCCEEECCccccCHHHH-----HHHHHHHH
Confidence 77753311222222333 346543 3 31 1110 00100 12456888888876533222 35666677
Q ss_pred HHHHHcccCc
Q 007301 572 AEALAGQVTQ 581 (609)
Q Consensus 572 A~aLA~~v~~ 581 (609)
++-|......
T Consensus 331 ~~ni~~~~~G 340 (365)
T 4hy3_A 331 LEDMDLMDRG 340 (365)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 7777766643
No 121
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.63 E-value=0.45 Score=47.35 Aligned_cols=102 Identities=17% Similarity=0.297 Sum_probs=60.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc-hhcchhcccc--CCCCCHHHHHh
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAHEH--EPVKELVDAVN 460 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~~~--~~~~~L~e~V~ 460 (609)
.||.|+|||+.|..+|..+... |. ...++++|.+---... ..++ .+..++..+. ....+. ++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 74 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDDP-EICR 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESCG-GGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCCH-HHhC
Confidence 5899999999999999877642 53 1479999985300000 0010 0111111110 000133 4555
Q ss_pred ccCCcEEEEccCCCCCCCH----------------HHHHHHHccCCCcEEEecCCCCC
Q 007301 461 AIKPTILIGTSGQGRTFTK----------------EVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~Ft~----------------evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
. .|++|=+.+.+. .+ ++++.|+++++..+|+.++||..
T Consensus 75 ~--aD~Vii~v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 75 D--ADMVVITAGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp T--CSEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred C--CCEEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 4 788875554332 23 88899988888889999999984
No 122
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.61 E-value=0.49 Score=47.72 Aligned_cols=98 Identities=17% Similarity=0.339 Sum_probs=55.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-hhcc----ccCCCCCHHH
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH----EHEPVKELVD 457 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA~----~~~~~~~L~e 457 (609)
+.||.|+|+|..|..+|..+..+ | .+++++|+.. .+.+.+..... .|-. ...-..++.|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~----~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRK----EIVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSH----HHHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCH----HHHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 46999999999999999988763 5 4688887741 11011111000 0000 0001134555
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCC
Q 007301 458 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQ 503 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 503 (609)
++. .|++| ++..+ ...+++++.++. +..+|..++|....
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 543 67655 22222 567777776654 55577788887654
No 123
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.58 E-value=0.56 Score=46.67 Aligned_cols=49 Identities=24% Similarity=0.264 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...|++.+++..+.++++.+++|+|||.+|..+|..+.. .| +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~-----~G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK-----DN--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTS-----SS--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHH-----CC--------CEEEEECC
Confidence 678999999988889999999999998666666655542 12 68888874
No 124
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.45 E-value=0.83 Score=47.14 Aligned_cols=106 Identities=16% Similarity=0.284 Sum_probs=65.0
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC---CCHHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV---KELVD 457 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~---~~L~e 457 (609)
++..||.|+|||..|.++|.+++. .|+ + .+.|+|.+-=..+.-..+|.+.. +|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~-----~~~----~--~v~L~Di~~~~~~g~~~dl~~~~-~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGL-----KEL----G--DVVLFDIAEGTPQGKGLDIAESS-PVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSSSHHHHHHHHHHHHH-HHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHh-----CCC----C--eEEEEeCCchhHHHHHHHHhchh-hhcCCCCEEEEeCCH-H
Confidence 556799999999999999988765 365 2 59999975211000000122211 122111111 344 7
Q ss_pred HHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 458 AVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
+++. .|++|=+.+.+ |. | -+++++.|.+++..-+|+-.|||.
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv 127 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL 127 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc
Confidence 7877 89887554433 32 1 256777888899999999999997
No 125
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.43 E-value=1.1 Score=44.31 Aligned_cols=94 Identities=12% Similarity=0.107 Sum_probs=56.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc--cCcccCCCccCCchhcchhc--------cccCCCC-
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KGLIVSSRLESLQHFKKPWA--------HEHEPVK- 453 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs--~GLi~~~R~~~L~~~k~~fA--------~~~~~~~- 453 (609)
||.|+|+|..|..+|..+... | .+++++|+ +.= .++..++... ....-..
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~ 62 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTE-------ILKSISAGREHPRLGVKLNGVEIFWP 62 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHH-------HHHHHHTTCCBTTTTBCCCSEEEECG
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHH-------HHHHHHHhCcCcccCccccceEEecH
Confidence 799999999999999988754 5 36888887 311 0111100000 0000112
Q ss_pred -CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 454 -ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 454 -~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++.|+++. .|++|=+ ... -..+++++.++...+..+|..++|-.
T Consensus 63 ~~~~~~~~~--~D~vi~~-v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 63 EQLEKCLEN--AEVVLLG-VST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp GGHHHHHTT--CSEEEEC-SCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred HhHHHHHhc--CCEEEEc-CCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 67777765 7877733 222 26788888876533456788888865
No 126
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=86.40 E-value=9 Score=40.59 Aligned_cols=191 Identities=16% Similarity=0.163 Sum_probs=110.0
Q ss_pred cCCCeeeecCCc---chHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQ---GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (609)
Q Consensus 349 r~~~~~FNDDiQ---GTaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~ 407 (609)
+..+++||---- .+|=-++|.+|+..|- .+..|.+.++.|+|-|..|..+|+.+..
T Consensus 90 ~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~--- 166 (404)
T 1sc6_A 90 KRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAES--- 166 (404)
T ss_dssp HTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHH---
Confidence 356788886443 4455578888888763 2567999999999999999999998764
Q ss_pred HhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 007301 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 483 (609)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 483 (609)
.|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ...++|+++.+.
T Consensus 167 --~G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 167 --LGM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp --TTC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHH
T ss_pred --CCC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHh
Confidence 264 5888887411 1010 01 112479999987 89887542 234689999999
Q ss_pred HHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEE------EecCCCCCccccCCeecCCCCCcccccchhhhHHHHH
Q 007301 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI------FASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIM 557 (609)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~Grai------fASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~ 557 (609)
.|. +.-++.=.|.=.---|---.+|+ .+|+.- |.. -|.++-+.-. ..-=+..|+.+-|=+|-...-
T Consensus 222 ~mk---~ga~lIN~aRg~~vd~~aL~~aL--~~g~i~gA~lDVf~~-EP~~~~~~~~--~pL~~~~nvilTPHi~~~T~e 293 (404)
T 1sc6_A 222 LMK---PGSLLINASRGTVVDIPALADAL--ASKHLAGAAIDVFPT-EPATNSDPFT--SPLAEFDNVLLTPHIGGSTQE 293 (404)
T ss_dssp HSC---TTEEEEECSCSSSBCHHHHHHHH--HTTSEEEEEEEC----------CTTT--GGGTTCTTEEEECCCSCCSHH
T ss_pred hcC---CCeEEEECCCChHHhHHHHHHHH--HcCCccEEEEeecCC-CCCCcccccc--chhhcCCCEEECCCCCCCcHH
Confidence 886 66788877752211111112333 345432 322 2221100000 001134689999977643222
Q ss_pred hCCcccCHHHHHHHHHHHHcccC
Q 007301 558 SGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 558 s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
+ -+.|...+++.|.+...
T Consensus 294 a-----~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 294 A-----QENIGLEVAGKLIKYSD 311 (404)
T ss_dssp H-----HHHHHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHHHHHHHc
Confidence 2 23455666666666654
No 127
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.37 E-value=0.67 Score=47.40 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=34.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D 69 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYD 69 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 468999999999999999999999876 76 799999986
No 128
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.14 E-value=2.5 Score=37.92 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=59.0
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHh
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVN 460 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~ 460 (609)
..+|+|.|| |-.|..+++.+++ .| .++++++++.- +.+.+......+.. +..+..++.++++
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~-----~g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 66 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQ-----AG-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVA 66 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-----CC-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHc
Confidence 368999998 8777777777754 25 36888877421 10111011111111 2222246778887
Q ss_pred ccCCcEEEEccCCCCC---------CCHHHHHHHHccCCCcEEEecC
Q 007301 461 AIKPTILIGTSGQGRT---------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
. +|++|=+.+.... .+..++++|.+..-+.+||.=|
T Consensus 67 ~--~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 67 G--QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp T--CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred C--CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 5 8999988775431 2577888887766677888654
No 129
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=86.05 E-value=2.5 Score=43.60 Aligned_cols=190 Identities=17% Similarity=0.269 Sum_probs=114.4
Q ss_pred cCCCeeeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (609)
Q Consensus 349 r~~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~ 407 (609)
+..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 82 ~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~-- 159 (324)
T 3evt_A 82 AAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL-- 159 (324)
T ss_dssp HTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred HCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC--
Confidence 35678887653 23444567777777652 26679999999999999999999988643
Q ss_pred HhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 007301 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 483 (609)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 483 (609)
|+ +++.+|+..- ..+.....+ ...+|.|+++. .|+++=.- ...++|+++.+.
T Consensus 160 ---G~-------~V~~~dr~~~-------~~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~ 215 (324)
T 3evt_A 160 ---GM-------HVIGVNTTGH-------PADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQ 215 (324)
T ss_dssp ---TC-------EEEEEESSCC-------CCTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCcc-------hhHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHh
Confidence 65 6788887421 111111111 12578899987 89888432 234789999999
Q ss_pred HHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCccccCCeecCCCCCcccccchhhhHHHHHh
Q 007301 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMS 558 (609)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifA-----SGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s 558 (609)
.|. +..++.=.|.-..--|-.-.+|+ .+|+.-.| ..-|.++ +. .-=+..|+.+-|=+|-.
T Consensus 216 ~mk---~gailIN~aRG~~vd~~aL~~aL--~~g~i~gA~lDV~~~EPl~~----~~--pL~~~~nvilTPHia~~---- 280 (324)
T 3evt_A 216 QTK---QQPMLINIGRGPAVDTTALMTAL--DHHQLSMAALDVTEPEPLPT----DH--PLWQRDDVLITPHISGQ---- 280 (324)
T ss_dssp TCC---SCCEEEECSCGGGBCHHHHHHHH--HTTSCSEEEESSCSSSSCCT----TC--GGGGCSSEEECCSCTTC----
T ss_pred cCC---CCCEEEEcCCChhhhHHHHHHHH--HhCCceEEEeCCCCCCCCCC----CC--hhhcCCCEEEcCccccC----
Confidence 886 67788877763322222222333 23543222 1112211 00 01235688888877532
Q ss_pred CCcccCHHHHHHHHHHHHcccC
Q 007301 559 GAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 559 ~a~~Itd~M~laAA~aLA~~v~ 580 (609)
...-.+.|...+++-|..++.
T Consensus 281 -t~~~~~~~~~~~~~nl~~~l~ 301 (324)
T 3evt_A 281 -IAHFRATVFPIFAANFAQFVK 301 (324)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHh
Confidence 222347777778888777763
No 130
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.03 E-value=1 Score=45.17 Aligned_cols=48 Identities=6% Similarity=0.197 Sum_probs=36.4
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.|+..+++..|.. .+.+++++|||.+|.+++..+.. .|. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~-----~G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKN-----SGF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHH-----TTC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC
Confidence 5666677666654 56899999999999999887754 365 689988873
No 131
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.02 E-value=0.31 Score=50.02 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998764 64 57888864
No 132
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.97 E-value=5 Score=41.67 Aligned_cols=176 Identities=18% Similarity=0.202 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcE
Q 007301 362 TASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (609)
Q Consensus 362 TaaV~LAgll~Alr~--------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 421 (609)
+|=-+++-+|+..|. .|..|.+.+|.|+|.|..|..+|+.+.. .|+ ++
T Consensus 130 vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~-----~G~-------~V 197 (340)
T 4dgs_A 130 VADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGRALASRAEA-----FGM-------SV 197 (340)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EE
T ss_pred HHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHHHHHHHHHH-----CCC-------EE
Confidence 455577777777753 2467899999999999999999998854 364 58
Q ss_pred EEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEec
Q 007301 422 WLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSL 497 (609)
Q Consensus 422 ~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaL 497 (609)
+.+|+.. .. .. .+. ...+|.|+++. .|+++=.- ...++++++.++.|. +.-++.=.
T Consensus 198 ~~~dr~~----~~--~~-----~~~----~~~sl~ell~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~ 257 (340)
T 4dgs_A 198 RYWNRST----LS--GV-----DWI----AHQSPVDLARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNV 257 (340)
T ss_dssp EEECSSC----CT--TS-----CCE----ECSSHHHHHHT--CSEEEECC----------CHHHHHHTT---TTCEEEEC
T ss_pred EEEcCCc----cc--cc-----Cce----ecCCHHHHHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEEC
Confidence 8888641 11 01 111 13589999987 89988442 234688899999886 66788877
Q ss_pred CCCCCCCCCCHHHHhccccCcEEEecCCCCC--ccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHH
Q 007301 498 SNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEAL 575 (609)
Q Consensus 498 SNPt~~aEct~e~A~~wT~GraifASGSPF~--pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aL 575 (609)
|.-..--|-.-.+|++ +|+.-.|.=-=|+ |.. +. .-=+..|+.+-|=+|-...-+ -+.|...+++.|
T Consensus 258 aRG~vvde~aL~~aL~--~g~i~gA~LDVf~~EP~~-~~---~L~~~~nvilTPHia~~t~e~-----~~~~~~~~~~nl 326 (340)
T 4dgs_A 258 ARGNVVDEDALIEALK--SGTIAGAGLDVFVNEPAI-RS---EFHTTPNTVLMPHQGSATVET-----RMAMGKLVLANL 326 (340)
T ss_dssp SCC----------------CCSSEEEESCCSSSSSC-CS---HHHHSSSEEECSSCSSCCHHH-----HHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHH--cCCceEEEeCCcCCCCCC-cc---chhhCCCEEEcCcCCcCCHHH-----HHHHHHHHHHHH
Confidence 7744333333334443 3443222111111 100 00 012346888888776432222 245666677777
Q ss_pred HcccC
Q 007301 576 AGQVT 580 (609)
Q Consensus 576 A~~v~ 580 (609)
.....
T Consensus 327 ~~~~~ 331 (340)
T 4dgs_A 327 AAHFA 331 (340)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 66654
No 133
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.87 E-value=1.4 Score=42.32 Aligned_cols=98 Identities=15% Similarity=0.276 Sum_probs=55.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|+|..|..+|..+... |.. ..++++++|++ . +++...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988753 531 12478888873 1 1122221111 11123577788876
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 502 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 502 (609)
+|++| ++..+ --.+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVi-lav~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILI-LSIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEE-ECSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 77776 33333 34667777666433 3557776666553
No 134
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=85.83 E-value=0.69 Score=46.73 Aligned_cols=100 Identities=22% Similarity=0.308 Sum_probs=60.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC----Cchhcchhccc--cCCCCCHHHH
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES----LQHFKKPWAHE--HEPVKELVDA 458 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~----L~~~k~~fA~~--~~~~~~L~e~ 458 (609)
||.|+|||..|.++|..+... ++ -..++++|.+- ++.+. +.+....+... .....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887642 21 25799999852 22111 11110001000 000135544
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 459 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++. .|++|=+.+.+ |- .-+++.+.|+++++.-+|+-.|||-
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 665 88887554432 21 1157778888888888888899997
No 135
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=85.78 E-value=0.78 Score=51.65 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.||+++|||..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 57789999999999999999999875 76 799999986
No 136
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=85.57 E-value=0.47 Score=51.53 Aligned_cols=126 Identities=15% Similarity=0.223 Sum_probs=75.9
Q ss_pred CceEEEeCcchH-HHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-c-c-cCC---CCCH
Q 007301 383 DQRFLFLGAGEA-GTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-H-E-HEP---VKEL 455 (609)
Q Consensus 383 d~rivf~GAGsA-g~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~-~-~~~---~~~L 455 (609)
..||.|+|||+. +.++|..|+.. ..+++ -..++|+|.+- ++.+.+......+. . . ... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665431 01432 35799999852 22111111111221 1 1 111 1478
Q ss_pred HHHHhccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 456 VDAVNAIKPTILIGTSGQGRT----------------------------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.++++. .|++|=..++++. .=+++++.|.++|+.-+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 899987 9998866655321 1358889999999999999999998
Q ss_pred CCCCCCHHHHhccccCcEEEecC
Q 007301 502 SQSECTAEEAYTWSQGRAIFASG 524 (609)
Q Consensus 502 ~~aEct~e~A~~wT~GraifASG 524 (609)
. +..+-+++.+...-+|.+|
T Consensus 175 d---i~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 A---IVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp H---HHHHHHHHHSTTCCEEECC
T ss_pred H---HHHHHHHHhCCCCCEEEeC
Confidence 2 3334444555333455554
No 137
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=85.55 E-value=0.35 Score=49.31 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=62.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCC-CCCHHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEP-VKELVDA 458 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~-~~~L~e~ 458 (609)
.||.|+|||+.|..+|-+++.. ++ -..++|+|.+- +|.+ +|.+. .+|.++..- ..+ .++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~----~k~~g~a~dl~~~-~~~~~~~~v~~~~-~~a 64 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDR----KLAQAHAEDILHA-TPFAHPVWVWAGS-YGD 64 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSH----HHHHHHHHHHHTT-GGGSCCCEEEECC-GGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHHHHHh-HhhcCCeEEEECC-HHH
Confidence 3899999999999988776542 43 25899999852 1110 12221 122211000 023 566
Q ss_pred HhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 459 VNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++. .|++|=+.+.+.. .-+++++.|.+++..-+|+-.|||.
T Consensus 65 ~~~--aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (310)
T 2xxj_A 65 LEG--ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV 119 (310)
T ss_dssp GTT--EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred hCC--CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 776 8888855544432 1245777778889999999999997
No 138
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.53 E-value=0.95 Score=45.83 Aligned_cols=99 Identities=20% Similarity=0.298 Sum_probs=61.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCC---CCCHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEP---VKELV 456 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~---~~~L~ 456 (609)
.||.|+|||..|.++|-.++. .|+ . + ++|+|.+- ++-+ .|.+... +...... ..++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-----~g~----~-~-v~L~Di~~----~~~~g~~~dl~~~~~-~~~~~~~i~~t~d~- 65 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-----KEL----G-D-IVLLDIVE----GVPQGKALDLYEASP-IEGFDVRVTGTNNY- 65 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC----S-E-EEEECSSS----SHHHHHHHHHHTTHH-HHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHH-----CCC----C-e-EEEEeCCc----cHHHHHHHhHHHhHh-hcCCCeEEEECCCH-
Confidence 489999999999999997754 354 1 3 99999751 1110 1211111 1100111 1456
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++++. .|++|=+.+.+.. .-+++.+.+.++++.-+|+-.|||.
T Consensus 66 ~a~~~--aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 66 ADTAN--SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 122 (309)
T ss_dssp GGGTT--CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSH
T ss_pred HHHCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCch
Confidence 67776 8998866554432 1246778888888888888789998
No 139
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=85.38 E-value=0.78 Score=46.64 Aligned_cols=123 Identities=19% Similarity=0.216 Sum_probs=72.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCC---CCCHHHHHhc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAVNA 461 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e~V~~ 461 (609)
||.|+|||..|.++|.+|+.. |+ -..+.|+|.+-=..+.-.-+|.+...+|-.+ .. ..+ .++++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~-~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKY-PKIVGGAD-YSLLKG 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCC-CEEEEESC-GGGGTT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCC-CEEEEeCC-HHHhCC
Confidence 799999999999999887653 54 2479999974211110000122222112111 11 124 677877
Q ss_pred cCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhcccc--CcEEEecC
Q 007301 462 IKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIFASG 524 (609)
Q Consensus 462 vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~--GraifASG 524 (609)
.|++|=+.+.+ |- | -+++++.|.+++..-+|+-.|||.. ....-+++.++ -+-+|++|
T Consensus 70 --aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd---~~t~~~~k~~g~p~~rviG~g 143 (294)
T 1oju_A 70 --SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMD---VMTYIMWKESGKPRNEVFGMG 143 (294)
T ss_dssp --CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHH---HHHHHHHHHSCCCTTSEEECS
T ss_pred --CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcch---HHHHHHHHhcCCCHHHEeecc
Confidence 89887555444 32 1 2567778889999999999999972 23344444431 13355555
No 140
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=85.31 E-value=8.7 Score=39.36 Aligned_cols=195 Identities=13% Similarity=0.073 Sum_probs=112.3
Q ss_pred cCCCeeeecCCcch---HHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQGT---ASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (609)
Q Consensus 349 r~~~~~FNDDiQGT---aaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~ 407 (609)
+..+.+.|----.+ |=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~--- 167 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEG--- 167 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHH---
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHH---
Confidence 45688888643333 44478888888762 2346889999999999999999998864
Q ss_pred HhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHHH
Q 007301 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVVE 483 (609)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv~ 483 (609)
.|+ +++.+|+.. . . . . ..++. ...+|.|+++. .|+++=.-. ..++|+++.++
T Consensus 168 --~G~-------~V~~~d~~~----~--~-~--~-~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 168 --FGA-------KVITYDIFR----N--P-E--L-EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp --TTC-------EEEEECSSC----C--H-H--H-HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred --CCC-------EEEEECCCc----c--h-h--H-HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 264 588888742 1 1 1 1 11221 12378899986 898885422 33678899999
Q ss_pred HHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEec-----CCC--CCccccCCee-cCC-----CCCcccccchh
Q 007301 484 AMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFAS-----GSP--FDPFEYGDNV-FVP-----GQANNAYIFPG 550 (609)
Q Consensus 484 ~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifAS-----GSP--F~pv~~~G~~-~~p-----~Q~NN~yiFPG 550 (609)
.|. +..++.-.|.-..--|-.-.+|. .+|+.-.|. .-| |++=. .+.. ..| =+..|+.+-|=
T Consensus 224 ~mk---~ga~lIn~arg~~vd~~aL~~aL--~~g~i~gA~LDV~~~EP~~l~~~~-~~~~~~~p~~~~L~~~~nvilTPH 297 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGPLVDTDAVIRGL--DSGKIFGYAMDVYEGEVGIFNEDW-EGKEFPDARLADLIARPNVLVTPK 297 (333)
T ss_dssp HSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCTTCTTTTTSBC-TTSCCSCHHHHHHHHCTTEEECSS
T ss_pred hCC---CCcEEEECCCCcccCHHHHHHHH--HhCCceEEEEecCCCCCCcccccc-ccccCCccchhhHHhCCCEEECCc
Confidence 886 66788877763322222222333 245443331 112 11100 0000 000 12468888887
Q ss_pred hhHHHHHhCCcccCHHHHHHHHHHHHcccCc
Q 007301 551 LGLGLIMSGAIRVHDDMLLAAAEALAGQVTQ 581 (609)
Q Consensus 551 lglG~l~s~a~~Itd~M~laAA~aLA~~v~~ 581 (609)
+|-...- --+.|...+++.|......
T Consensus 298 ia~~t~~-----~~~~~~~~~~~nl~~~~~g 323 (333)
T 1j4a_A 298 TAFYTTH-----AVRNMVVKAFDNNLELVEG 323 (333)
T ss_dssp CTTCBHH-----HHHHHHHHHHHHHHHHHTT
T ss_pred cccCHHH-----HHHHHHHHHHHHHHHHHcC
Confidence 7632211 1245666677777766543
No 141
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=85.10 E-value=8.8 Score=39.87 Aligned_cols=195 Identities=11% Similarity=0.121 Sum_probs=112.5
Q ss_pred CCCeeeecCCcc---hHHHHHHHHHHHHHH----------h----------CCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007301 350 TTHLVFNDDIQG---TASVVLAGLISAMKF----------L----------GGSLADQRFLFLGAGEAGTGIAELIALEI 406 (609)
Q Consensus 350 ~~~~~FNDDiQG---TaaV~LAgll~Alr~----------~----------g~~L~d~rivf~GAGsAg~GIA~li~~~~ 406 (609)
..+.+.|----. +|=-+++-+|+..|. . +..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 368888864333 444568888877751 2 3468899999999999999999988643
Q ss_pred HHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 007301 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 482 (609)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 482 (609)
|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.- ...++|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888742 1 0011 111 12389999987 99988543 23478999999
Q ss_pred HHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCC--Ccccc--C---Ceec-----CCCCCcccccchh
Q 007301 483 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPF--DPFEY--G---DNVF-----VPGQANNAYIFPG 550 (609)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF--~pv~~--~---G~~~-----~p~Q~NN~yiFPG 550 (609)
+.|. +..++.=.|.-..--|-.-.+|+ .+|+.-.|.=-=| +|..+ + ++.. .--+..|+.+-|=
T Consensus 224 ~~mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPH 298 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGELVDTGALIKAL--QDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPH 298 (343)
T ss_dssp HHSC---TTCEEEECSCGGGBCHHHHHHHH--HHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSS
T ss_pred hhCC---CCcEEEECCCChhhhHHHHHHHH--HcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCc
Confidence 9996 77788877763311222222333 2343211110011 11000 0 0000 0124568999998
Q ss_pred hhHHHHHhCCcccCHHHHHHHHHHHHcccCcC
Q 007301 551 LGLGLIMSGAIRVHDDMLLAAAEALAGQVTQE 582 (609)
Q Consensus 551 lglG~l~s~a~~Itd~M~laAA~aLA~~v~~e 582 (609)
+|-..- .--..|...+++-|...+..+
T Consensus 299 ia~~t~-----ea~~~~~~~~~~ni~~~l~g~ 325 (343)
T 2yq5_A 299 SAFYTE-----TSIRNMVQICLTDQLTIAKGG 325 (343)
T ss_dssp CTTCBH-----HHHHHHHHHHHHHHHHHHTTC
T ss_pred cccchH-----HHHHHHHHHHHHHHHHHHcCC
Confidence 763222 222567777777777776544
No 142
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=85.03 E-value=2.4 Score=43.73 Aligned_cols=188 Identities=18% Similarity=0.149 Sum_probs=111.6
Q ss_pred CCeeeecCC---cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcC
Q 007301 351 THLVFNDDI---QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTN 411 (609)
Q Consensus 351 ~~~~FNDDi---QGTaaV~LAgll~Alr~----------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G 411 (609)
.+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 455555422 12444577777777663 35679999999999999999999998643 6
Q ss_pred CCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHc
Q 007301 412 MPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMAS 487 (609)
Q Consensus 412 ~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~ 487 (609)
+ +++.+|+.. . ....... .....+|.|+++. .|+++=.- ...++|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~----~---~~~~~~~-----~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG----R---ERAGFDQ-----VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC----C---CCTTCSE-----EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh----H---Hhhhhhc-----ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888753 1 1111111 1123579999986 89888542 234688888888885
Q ss_pred cCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcc
Q 007301 488 LNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIR 562 (609)
Q Consensus 488 ~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifA-----SGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~ 562 (609)
+..++.=.|.-..--|---.+|+ .+|+.-.| ..-|.++- . .-=+..|+.+-|=++- .+
T Consensus 222 --~gailIN~aRG~~vde~aL~~aL--~~g~i~ga~lDV~~~EPl~~~----~--pL~~~~nvilTPHia~------~t- 284 (324)
T 3hg7_A 222 --PGAILFNVGRGNAINEGDLLTAL--RTGKLGMAVLDVFEQEPLPAD----S--PLWGQPNLIITPHNSA------YS- 284 (324)
T ss_dssp --TTCEEEECSCGGGBCHHHHHHHH--HTTSSSEEEESCCSSSSCCTT----C--TTTTCTTEEECCSCSS------CC-
T ss_pred --CCcEEEECCCchhhCHHHHHHHH--HcCCceEEEeccCCCCCCCCC----C--hhhcCCCEEEeCCCcc------cc-
Confidence 67788877753311222222333 23443211 11122110 0 0113568888887653 22
Q ss_pred cCHHHHHHHHHHHHcccCcC
Q 007301 563 VHDDMLLAAAEALAGQVTQE 582 (609)
Q Consensus 563 Itd~M~laAA~aLA~~v~~e 582 (609)
....|...+++-|.....-+
T Consensus 285 ~~~~~~~~~~~nl~~~~~G~ 304 (324)
T 3hg7_A 285 FPDDVAQIFVRNYIRFIDGQ 304 (324)
T ss_dssp CHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 23678888888888776544
No 143
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=84.99 E-value=4.9 Score=41.43 Aligned_cols=193 Identities=14% Similarity=0.096 Sum_probs=110.7
Q ss_pred CCeeeecCCc---chHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007301 351 THLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (609)
Q Consensus 351 ~~~~FNDDiQ---GTaaV~LAgll~Alr~-------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~ 408 (609)
.+++.|---- .+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 5566654222 3455578888877752 35679999999999999999999988643
Q ss_pred hcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 007301 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (609)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 484 (609)
|+ +++.+|+..- . . .+.......+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~------~-~------~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR------E-D------LKEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC------H-H------HHHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc------h-h------hHhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 64 6888887421 0 1 00101112359999987 89887542 3457899999999
Q ss_pred HHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCC--ccc----cCCeec-------C-CCCCcccccchh
Q 007301 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFE----YGDNVF-------V-PGQANNAYIFPG 550 (609)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~--pv~----~~G~~~-------~-p~Q~NN~yiFPG 550 (609)
|. +..||.=.|.-..--|-.-.+|+ .+|+.-.|.=-=|+ |.. +.++.. . -=+..|+.+-|=
T Consensus 220 mk---~gailIN~aRg~~vd~~aL~~aL--~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPH 294 (334)
T 2pi1_A 220 MK---DGVYLINTARGKVVDTDALYRAY--QRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPH 294 (334)
T ss_dssp SC---TTEEEEECSCGGGBCHHHHHHHH--HTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCS
T ss_pred CC---CCcEEEECCCCcccCHHHHHHHH--HhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCc
Confidence 96 67788877763322222222333 34655433211121 110 011100 0 013468888888
Q ss_pred hhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 551 LGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 551 lglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
+|-...- --+.|...+++.|.....
T Consensus 295 ia~~t~e-----~~~~~~~~~~~ni~~~~~ 319 (334)
T 2pi1_A 295 IAYYTDK-----SLERIREETVKVVKAFVK 319 (334)
T ss_dssp CTTCBHH-----HHHHHHHHHHHHHHHHHH
T ss_pred cccChHH-----HHHHHHHHHHHHHHHHHc
Confidence 7632111 124566666666666553
No 144
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=84.91 E-value=12 Score=38.27 Aligned_cols=120 Identities=14% Similarity=0.114 Sum_probs=82.3
Q ss_pred cCCCeeeecCCcch---HHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQGT---ASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (609)
Q Consensus 349 r~~~~~FNDDiQGT---aaV~LAgll~Alr~-------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~ 406 (609)
+..+.+.|---..+ |=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~-- 166 (333)
T 1dxy_A 89 QYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKG-- 166 (333)
T ss_dssp HTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHH--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHH--
Confidence 35678887543333 44478888887651 2457899999999999999999998864
Q ss_pred HHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHHHH
Q 007301 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKEVV 482 (609)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~evv 482 (609)
.|+ +++.+|+.. . .... .++. ..+|.|+++. .|+++=.-- ..++|+++.+
T Consensus 167 ---~G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l 220 (333)
T 1dxy_A 167 ---FGA-------KVIAYDPYP----M--KGDH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAF 220 (333)
T ss_dssp ---TTC-------EEEEECSSC----C--SSCC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHH
T ss_pred ---CCC-------EEEEECCCc----c--hhhH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHH
Confidence 264 588888742 1 1111 1121 2378899986 898885421 2368999999
Q ss_pred HHHHccCCCcEEEecCC
Q 007301 483 EAMASLNEKPIIFSLSN 499 (609)
Q Consensus 483 ~~Ma~~~erPIIFaLSN 499 (609)
+.|. +..++.=.|.
T Consensus 221 ~~mk---~ga~lIn~sr 234 (333)
T 1dxy_A 221 NLMK---PGAIVINTAR 234 (333)
T ss_dssp HHSC---TTEEEEECSC
T ss_pred hhCC---CCcEEEECCC
Confidence 9986 5677777776
No 145
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=84.85 E-value=0.79 Score=46.62 Aligned_cols=98 Identities=18% Similarity=0.355 Sum_probs=62.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCCC---CCHHH
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV---KELVD 457 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~---~~L~e 457 (609)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++.+ +|.+.. .+......+ .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHAA-AELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHHH-HHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHhh-hhcCCCeEEEECCCH-H
Confidence 689999999999999776542 54 379999985 22211 121111 111101111 345 6
Q ss_pred HHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 458 AVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
+++. .|++|=+.+.+.. .-+++++.|.++++.-+|+=.|||.
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv 119 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV 119 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch
Confidence 7776 9999866555531 1357888888888888777789998
No 146
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.81 E-value=2.1 Score=46.53 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=58.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-hhc-cccCCCCCHHHHHhc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~e~V~~ 461 (609)
.+|.|+|+|..|.++|..|+.. |. +++++|+. .+ .++...+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRT----QS---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----SH---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998753 63 57888763 11 1111111 000 011123578888775
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 462 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
. +||++| ++-..+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 477766 44434445677777776543 346777788743
No 147
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=84.79 E-value=0.67 Score=47.60 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=66.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC--cccCCCccCCchhcchhccccCCC--CCHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--LIVSSRLESLQHFKKPWAHEHEPV--KELV 456 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G--Li~~~R~~~L~~~k~~fA~~~~~~--~~L~ 456 (609)
.+..||.++|||..|.++|..++.. |+ ..+.|+|.+- =..+....+|.+. .++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~~-~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLEA-SPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHHH-HHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHHh-hhhccCCCEEEEcCCH
Confidence 4567999999999999999988752 54 3789999861 1111110112221 2333211111 1113
Q ss_pred HHHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 457 DAVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++++. .|++|=+.+.+ |- | -+++++.+++++..-+|+-.|||.
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv 130 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV 130 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH
Confidence 56666 88887555443 21 2 257888888999999999999997
No 148
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=84.68 E-value=0.92 Score=50.89 Aligned_cols=38 Identities=26% Similarity=0.442 Sum_probs=33.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|++.||+++|||..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 467889999999999999999999875 76 799999976
No 149
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.68 E-value=1.1 Score=44.95 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=57.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC--------cccCCCccCCchhcchhccccCCCCCH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG--------LIVSSRLESLQHFKKPWAHEHEPVKEL 455 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G--------Li~~~R~~~L~~~k~~fA~~~~~~~~L 455 (609)
.||.|+|+|+-|..+|..|... | .+++++|+.- +...++ ....++ + ++..-..++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999888653 5 4688888753 211110 000111 0 000111345
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCCC
Q 007301 456 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 502 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 502 (609)
.++.+ .+|++| ++... ..++++++.++.. .+..+|+.+.|-..
T Consensus 66 ~~~~~--~~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELET--KPDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSS--CCSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCC--CCCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 44432 378777 44433 3467899988754 34567888899764
No 150
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=84.53 E-value=1.2 Score=47.58 Aligned_cols=124 Identities=13% Similarity=0.183 Sum_probs=75.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-hcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCC---CCCHHHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISK-QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP---VKELVDAV 459 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~-~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~---~~~L~e~V 459 (609)
.||.|+|||+. .+..++..+.+ ..++. -..++|+|.+- +|.+.........++.... ..++.|++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999995 55555444443 23442 36799999752 2211000111111111011 25788999
Q ss_pred hccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHccCCCcEEEecCCCCCCCC
Q 007301 460 NAIKPTILIGTSGQGR---------------TF-------------------TKEVVEAMASLNEKPIIFSLSNPTSQSE 505 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~aE 505 (609)
+. .|++|=..++++ +. =.++++.|.++| .-+|+-.|||. .
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv--d- 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS--G- 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH--H-
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH--H-
Confidence 98 999998777753 22 258899999999 99999999998 2
Q ss_pred CCHHHHhccccCcEEEecC
Q 007301 506 CTAEEAYTWSQGRAIFASG 524 (609)
Q Consensus 506 ct~e~A~~wT~GraifASG 524 (609)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 2334455556432455554
No 151
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=84.52 E-value=1.7 Score=41.90 Aligned_cols=95 Identities=14% Similarity=0.103 Sum_probs=56.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhc---chhccccCCCCCHHHHHhc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK---KPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k---~~fA~~~~~~~~L~e~V~~ 461 (609)
||.|+|+|..|..+|..+... | .+++++|+.- ++.+.+.... ..+- ..... +..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~-~~~~~-~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFN-ESLTA-NDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEE-EEEEE-SCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceee-eeeee-cCccccCC
Confidence 799999999999999988653 5 3688888742 2111121100 0000 00001 22466765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
.|++|= +.... ..+++++.++.. .+..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 888773 33332 368999988764 3456777788865
No 152
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=84.41 E-value=0.74 Score=46.49 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=66.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc---ccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL---IVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.||+|.|| |..|..++..|+. .|.--..-...++++|...- ...... +|.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~-----~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAA-----GEMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 9999999887754 24300000137999997420 000000 12211112322222225688888
Q ss_pred hccCCcEEEEccCCCCC--------------CCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 460 NAIKPTILIGTSGQGRT--------------FTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
+. +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 75 9999977765532 3566788888876 666888899996
No 153
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.23 E-value=0.58 Score=48.13 Aligned_cols=103 Identities=18% Similarity=0.276 Sum_probs=64.8
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCCC--CC
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEPV--KE 454 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~~--~~ 454 (609)
++..||.|+|||..|.++|..++. .|+ + .+.|+|.+- ++.+ .|.+.. ++......+ .+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~-----~~~----~--~v~l~Di~~----~~~~g~a~dL~~~~-~~~~~~~~v~~t~ 66 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALI-----KQL----G--DVVLFDIAQ----GMPNGKALDLLQTC-PIEGVDFKVRGTN 66 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC----C--EEEEECSSS----SHHHHHHHHHHTTH-HHHTCCCCEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-----CCC----c--eEEEEeCCh----HHHHHHHHHHHhhh-hhcCCCcEEEEcC
Confidence 345799999999999999988765 365 2 699999852 2210 122211 111111111 12
Q ss_pred HHHHHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCC
Q 007301 455 LVDAVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt 501 (609)
-.++++. .|++|=+.+.+ |. | -+++++.+.++++.-+|+-.|||.
T Consensus 67 d~~a~~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 125 (321)
T 3p7m_A 67 DYKDLEN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL 125 (321)
T ss_dssp CGGGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred CHHHHCC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch
Confidence 2467776 89887555444 31 1 256778888899998999999997
No 154
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.75 E-value=2.2 Score=42.96 Aligned_cols=100 Identities=11% Similarity=0.163 Sum_probs=54.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc-CCCCCHHHHHh
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDAVN 460 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~e~V~ 460 (609)
+..||.|+|+|..|..+|..+... |.. ...+++++|+. .++ +.+... .... .-..+..|+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~----~~~-~~~~~l----~~~G~~~~~~~~e~~~ 83 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPD----MDL-ATVSAL----RKMGVKLTPHNKETVQ 83 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----TTS-HHHHHH----HHHTCEEESCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCC----ccH-HHHHHH----HHcCCEEeCChHHHhc
Confidence 345899999999999999988653 531 11468888863 110 001111 1100 01135666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCCC
Q 007301 461 AIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPTS 502 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 502 (609)
. .|++| ++..+ -..+++++.+... .+..+|.-++|..+
T Consensus 84 ~--aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 84 H--SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp H--CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred c--CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 5 66655 33222 3556676666543 23456666777653
No 155
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.67 E-value=0.79 Score=45.02 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=32.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 35678999999999999999999875 75 7899999873
No 156
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.64 E-value=1.6 Score=46.33 Aligned_cols=121 Identities=21% Similarity=0.262 Sum_probs=67.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.++.+||+|+|.|.+|+++|+++.+ .| .++...|.+-.-.....+.|.....++-..+.+ ..+ +
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~-----~G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~-~~~---~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAK-----LG-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP-LEL---L 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHH-----TT-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESCCC-GGG---G
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHh-----CC-------CEEEEEeCCcccCChHHHHHHhCCCEEEECCCh-HHh---h
Confidence 4678999999999999999887765 37 468888885211000001121111111111111 111 1
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecC
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFV 538 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~ 538 (609)
+. .+|.+|=.++.+ .=++++.++.. ..-||| +. +|-++...+++.|-.||| ||||-.
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~--~gi~v~-------~~----~e~~~~~~~~~~IaVTGT-------nGKTTT 126 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALE--KQIPVL-------TE----VELAYLVSESQLIGITGS-------NGKTTT 126 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHH--TTCCEE-------CH----HHHHHHHCCSEEEEEECS-------SCHHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHH--CCCcEE-------eH----HHHHHHhcCCCEEEEECC-------CCHHHH
Confidence 10 168788655665 34677776654 244555 22 334555567788889997 676543
No 157
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=83.59 E-value=3.7 Score=40.37 Aligned_cols=106 Identities=11% Similarity=0.131 Sum_probs=63.1
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh----cchhcc-ccCCCCC
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----KKPWAH-EHEPVKE 454 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~----k~~fA~-~~~~~~~ 454 (609)
+...||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... ...+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45679999998 88888888887753 52 2367777764311 111112111 111111 2222346
Q ss_pred HHHHHhccCCcEEEEccCCCCCC----------------CHHHHHHHHccCCCcEEEecC
Q 007301 455 LVDAVNAIKPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 498 (609)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88889888999999887754321 366888888776666888543
No 158
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.54 E-value=3.1 Score=42.67 Aligned_cols=192 Identities=11% Similarity=0.096 Sum_probs=112.5
Q ss_pred CCCeeeecCC----cchHHHHHHHHHHHHHH----------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007301 350 TTHLVFNDDI----QGTASVVLAGLISAMKF----------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (609)
Q Consensus 350 ~~~~~FNDDi----QGTaaV~LAgll~Alr~----------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~ 409 (609)
..+++.|--- +..|=-+++.+|+..|. .+..|.+.++.|+|.|..|..+|+.+..
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~----- 160 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQA----- 160 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHT-----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHH-----
Confidence 4666665321 34556678888888764 2567899999999999999999998854
Q ss_pred cCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHH
Q 007301 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAM 485 (609)
Q Consensus 410 ~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~M 485 (609)
.|+ +++.+|+..- ..+... .+. ...+|.|+++. .|+++=.- ...++|+++.++.|
T Consensus 161 ~G~-------~V~~~dr~~~-------~~~~~~-~~~----~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 161 WGF-------PLRCWSRSRK-------SWPGVE-SYV----GREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp TTC-------CEEEEESSCC-------CCTTCE-EEE----SHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred CCC-------EEEEEcCCch-------hhhhhh-hhc----ccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 364 5777876421 111111 110 11478899886 89887431 23468999999888
Q ss_pred HccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcccc-CCeecCCCCCcccccchhhhHHHHHhCCcccC
Q 007301 486 ASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEY-GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVH 564 (609)
Q Consensus 486 a~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~-~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~It 564 (609)
. +..++.=.|.-..--|---.+|+ .+|+.-.|.=--|++--. .+.. -=+..|+.+-|=++- .+. .
T Consensus 220 k---~gailIN~aRG~~vd~~aL~~aL--~~g~i~gA~lDV~~~EPl~~~~p--L~~~~nvilTPHia~------~t~-~ 285 (315)
T 3pp8_A 220 P---DGAYVLNLARGVHVQEADLLAAL--DSGKLKGAMLDVFSQEPLPQESP--LWRHPRVAMTPHIAA------VTR-P 285 (315)
T ss_dssp C---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCSSSSCCTTCG--GGGCTTEEECSSCSS------CCC-H
T ss_pred C---CCCEEEECCCChhhhHHHHHHHH--HhCCccEEEcCCCCCCCCCCCCh--hhcCCCEEECCCCCc------ccH-H
Confidence 6 67788877763322222222333 345543332111111000 0110 114568888887762 222 3
Q ss_pred HHHHHHHHHHHHcccCc
Q 007301 565 DDMLLAAAEALAGQVTQ 581 (609)
Q Consensus 565 d~M~laAA~aLA~~v~~ 581 (609)
+.|...+++-|.....-
T Consensus 286 ~~~~~~~~~ni~~~~~G 302 (315)
T 3pp8_A 286 AEAIDYISRTITQLEKG 302 (315)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 57777788877776643
No 159
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=83.52 E-value=7.5 Score=40.06 Aligned_cols=167 Identities=13% Similarity=0.075 Sum_probs=91.0
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHH
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 457 (609)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....++ + ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~~-~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEKA-L--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHHH-H--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHhh-c--CcEEeCCHHH
Confidence 5679999999999999999999987522 364 6888887421 1 111110 0 0011147888
Q ss_pred HHhccCCcEEEEccC----CCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccc-c
Q 007301 458 AVNAIKPTILIGTSG----QGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFE-Y 532 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~-~ 532 (609)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-..--|-.-.+|+ .+|+. .+.|.-+-..+ .
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg~~vd~~aL~~aL--~~~~i-~gaglDv~~~EP~ 288 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARGPVISQDALIAAL--KSGKL-LSAGLDVHEFEPQ 288 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHH--HTTSE-EEEEESSCTTTTS
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCCchhCHHHHHHHH--HhCCc-eEEEeccCCCCCC
Confidence 8886 898885421 23688888998885 56677766653211121223333 34543 32332211111 0
Q ss_pred CCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 533 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 533 ~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
..... =+..|+.+-|=++-....+ ...|...+++.|.....
T Consensus 289 ~~~~L--~~~~nviltPH~~~~t~e~-----~~~~~~~~~~ni~~~~~ 329 (348)
T 2w2k_A 289 VSKEL--IEMKHVTLTTHIGGVAIET-----FHEFERLTMTNIDRFLL 329 (348)
T ss_dssp CCHHH--HTSSSEEECCSCTTCSHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCchh--hcCCCEEEcCcCCCCCHHH-----HHHHHHHHHHHHHHHHc
Confidence 00000 1345777778665322221 24566666666666654
No 160
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=83.50 E-value=1.5 Score=45.31 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=25.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
-.||.|+|||..|.|||..++.+ |+ ++.|+|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988764 75 5777775
No 161
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.48 E-value=2.3 Score=40.25 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=48.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
..+...||.|+|+|..|..+|..+... | .+++++|++ .. +
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~--------~~--------------------~ 54 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK--------DQ--------------------A 54 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT--------CC--------------------C
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC--------HH--------------------H
Confidence 456678999999999999999988653 5 368888763 11 1
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
++ +.|++|= +.. ....+++++.++...+..+|.-+||+..
T Consensus 55 ~~--~aD~vi~-av~-~~~~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 55 TT--LGEIVIM-AVP-YPALAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp SS--CCSEEEE-CSC-HHHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred hc--cCCEEEE-cCC-cHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 22 3565552 222 2345677776654323668888888553
No 162
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=83.48 E-value=4.5 Score=42.95 Aligned_cols=180 Identities=12% Similarity=0.074 Sum_probs=101.0
Q ss_pred hHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcE
Q 007301 362 TASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKI 421 (609)
Q Consensus 362 TaaV~LAgll~Alr~--------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i 421 (609)
+|=-+++-+|+..|. .+..|.+.++.|+|.|..|..+|+.+.. .|+ ++
T Consensus 150 VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a-----~G~-------~V 217 (393)
T 2nac_A 150 VAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAP-----FDV-------HL 217 (393)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGG-----GTC-------EE
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHh-----CCC-------EE
Confidence 444467777777652 2567999999999999999999998753 263 57
Q ss_pred EEEcccCcccCCCccCCchhcchhccc-c-CCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEE
Q 007301 422 WLVDSKGLIVSSRLESLQHFKKPWAHE-H-EPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 422 ~lvDs~GLi~~~R~~~L~~~k~~fA~~-~-~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+.+|+.. .. . ..+.. . ....+|.|+++. .|+++=.- ...++|+++.++.|. +..+|.
T Consensus 218 ~~~d~~~----~~---~-----~~~~~~G~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailI 280 (393)
T 2nac_A 218 HYTDRHR----LP---E-----SVEKELNLTWHATREDMYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIV 280 (393)
T ss_dssp EEECSSC----CC---H-----HHHHHHTCEECSSHHHHGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEE
T ss_pred EEEcCCc----cc---h-----hhHhhcCceecCCHHHHHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEE
Confidence 8787631 10 1 11111 0 112478898886 89888542 234789999988886 667888
Q ss_pred ecCCCCCCCCCCHHHHhccccCcEEEecCCCCC--ccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007301 496 SLSNPTSQSECTAEEAYTWSQGRAIFASGSPFD--PFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAE 573 (609)
Q Consensus 496 aLSNPt~~aEct~e~A~~wT~GraifASGSPF~--pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~ 573 (609)
=.|.-.---|-.-.+|+ .+|+.-.|.--=|. |.. ....+ =+..|+.+-|=++-...-+ ...|...+++
T Consensus 281 N~aRG~~vde~aL~~aL--~~g~i~gA~lDV~~~EP~~-~~~pL--~~~~nvilTPHia~~T~e~-----~~~~~~~~~~ 350 (393)
T 2nac_A 281 NTARGKLCDRDAVARAL--ESGRLAGYAGDVWFPQPAP-KDHPW--RTMPYNGMTPHISGTTLTA-----QARYAAGTRE 350 (393)
T ss_dssp ECSCGGGBCHHHHHHHH--HTTSEEEEEESCCSSSSCC-TTCGG--GTSTTBCCCCSCTTCSHHH-----HHHHHHHHHH
T ss_pred ECCCchHhhHHHHHHHH--HcCCeeEEEEEecCCCCCC-CCChh--HcCCCEEECCCCCcCcHHH-----HHHHHHHHHH
Confidence 77752211111122333 34554333211111 110 01111 1356888999876432222 2344555556
Q ss_pred HHHcccC
Q 007301 574 ALAGQVT 580 (609)
Q Consensus 574 aLA~~v~ 580 (609)
-|.....
T Consensus 351 nl~~~~~ 357 (393)
T 2nac_A 351 ILECFFE 357 (393)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6655543
No 163
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=83.40 E-value=0.59 Score=48.05 Aligned_cols=104 Identities=20% Similarity=0.276 Sum_probs=63.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC--CCHHHHHhcc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~v 462 (609)
||.|+|||..|.++|..++.. |+ -..+.|+|.+-=..++-.-+|.+. .++......+ .+..++++.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 54 258999998521111000012221 1121111111 134567776
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 463 KPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 463 kPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+ |- .-+++.+.+.++++..+|+-.|||.
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv 121 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL 121 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch
Confidence 88877554443 21 1256777888999999999999997
No 164
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.23 E-value=2.6 Score=42.28 Aligned_cols=111 Identities=15% Similarity=0.186 Sum_probs=63.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCC-CccCCchhcc--hhccc---cCC---CC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFKK--PWAHE---HEP---VK 453 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~-R~~~L~~~k~--~fA~~---~~~---~~ 453 (609)
..||.|+|+|..|..+|..+... |....+...+++++|+..-.... +.+.+..... .|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~-----g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN-----AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-----CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 46899999999999999998765 21000001468888875321100 0011111000 01000 001 14
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 502 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 502 (609)
++.|+++. .|++| ++... ...+++++.+.... +..+|..++|-..
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888875 88777 33333 46789999887643 4678889999654
No 165
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=83.14 E-value=0.98 Score=37.21 Aligned_cols=87 Identities=17% Similarity=0.176 Sum_probs=50.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
..+|+|+|+|..|..+++.+.. .|. .+++++|++. ++.+.+......+.. +.....++.++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~-----~g~------~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 68 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKT-----SSN------YSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALG- 68 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----CSS------EEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTT-
T ss_pred cCeEEEECCCHHHHHHHHHHHh-----CCC------ceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHc-
Confidence 4689999999999998888765 352 4688888741 111111100101111 1112235666766
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcc
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMASL 488 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~~ 488 (609)
++|++|=+. +..++..+++...+.
T Consensus 69 -~~d~vi~~~--~~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 69 -GFDAVISAA--PFFLTPIIAKAAKAA 92 (118)
T ss_dssp -TCSEEEECS--CGGGHHHHHHHHHHT
T ss_pred -CCCEEEECC--CchhhHHHHHHHHHh
Confidence 489999665 334677777776543
No 166
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=82.85 E-value=6.3 Score=40.16 Aligned_cols=122 Identities=16% Similarity=0.195 Sum_probs=78.1
Q ss_pred CCCeeeecCCc---chHHHHHHHHHHHHHH---------------------hCCCCCCceEEEeCcchHHHHHHHHHHHH
Q 007301 350 TTHLVFNDDIQ---GTASVVLAGLISAMKF---------------------LGGSLADQRFLFLGAGEAGTGIAELIALE 405 (609)
Q Consensus 350 ~~~~~FNDDiQ---GTaaV~LAgll~Alr~---------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~ 405 (609)
..+.+.|---- .+|=-+++-+|+..|. .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~- 167 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQG- 167 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHT-
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 45666665432 3344478888887663 2346889999999999999999998753
Q ss_pred HHHhcCCCHhhhcCcEEEEcc-cCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccC----CCCCCCHH
Q 007301 406 ISKQTNMPLEETRKKIWLVDS-KGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSG----QGRTFTKE 480 (609)
Q Consensus 406 ~~~~~G~s~eeAr~~i~lvDs-~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~----~~g~Ft~e 480 (609)
.|+ +++.+|+ .. +. ...+ .+ ......++.|+++. .|+++=.-- ..++++++
T Consensus 168 ----~G~-------~V~~~d~~~~-------~~-~~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 168 ----FDM-------DIDYFDTHRA-------SS-SDEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp ----TTC-------EEEEECSSCC-------CH-HHHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred ----CCC-------EEEEECCCCc-------Ch-hhhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 253 6888886 41 10 0000 00 00112378898886 888874421 33678888
Q ss_pred HHHHHHccCCCcEEEecCC
Q 007301 481 VVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 481 vv~~Ma~~~erPIIFaLSN 499 (609)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888775 5668877776
No 167
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=82.77 E-value=1.1 Score=44.53 Aligned_cols=32 Identities=31% Similarity=0.523 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998753 63 68888874
No 168
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.76 E-value=2.5 Score=45.29 Aligned_cols=99 Identities=15% Similarity=0.176 Sum_probs=60.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
..||.|+|+|..|..+|..+... |. +++++|+. . +.++...+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~---~~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----T---SKTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----H---HHHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----H---HHHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 46899999999999999988653 63 57777763 1 112222111100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 462 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
. +||++| ++...+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 478777 44444445677887776543 456777888854
No 169
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=82.73 E-value=1.6 Score=46.48 Aligned_cols=96 Identities=18% Similarity=0.307 Sum_probs=51.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHh-hhcCcEEEEcccC-------cccCCCcc--CCchhcchhccccCCCC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLE-ETRKKIWLVDSKG-------LIVSSRLE--SLQHFKKPWAHEHEPVK 453 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~e-eAr~~i~lvDs~G-------Li~~~R~~--~L~~~k~~fA~~~~~~~ 453 (609)
.||.|+|||+=|+.+|..+.+.-.. .+.- +-.=++|..|..= .|...|.+ .|+..+.| ....-..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999875321 1000 0012467665431 12222211 12222211 0001125
Q ss_pred CHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcc
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASL 488 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~ 488 (609)
+|.|+++. .|++|= ++|-.|-+++++.+..+
T Consensus 110 dl~~al~~--ad~ii~--avPs~~~r~~l~~l~~~ 140 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF--NIPHQFLPRICSQLKGH 140 (391)
T ss_dssp CHHHHHTT--CSEEEE--CSCGGGHHHHHHHHTTT
T ss_pred CHHHHHhc--CCEEEE--ECChhhhHHHHHHhccc
Confidence 78888876 666542 22335677888887654
No 170
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=82.71 E-value=1.3 Score=44.78 Aligned_cols=102 Identities=21% Similarity=0.310 Sum_probs=64.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc--cC-cccCCCccCCchhcchhccccCCC----CCHH
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS--KG-LIVSSRLESLQHFKKPWAHEHEPV----KELV 456 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs--~G-Li~~~R~~~L~~~k~~fA~~~~~~----~~L~ 456 (609)
||+|.|| |..|..++..|+. .|+ ...++|+|. +- .+..... .|.+.. ++....-.+ .++.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~-dl~~~~-~~~~~~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLRE-DIYDAL-AGTRSDANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHH-HHHHHH-TTSCCCCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHH-HHHHhH-HhcCCCeEEEeCCcchH
Confidence 7999999 9999998887753 253 256999996 21 0000000 122211 222100011 1367
Q ss_pred HHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
++++. .|++|=+.+.+.. .+++++++|.+++ +.+|+--|||.
T Consensus 70 ~al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 70 RIIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 88887 8988877665531 3568889999999 99999999997
No 171
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=81.95 E-value=1.8 Score=45.36 Aligned_cols=96 Identities=23% Similarity=0.342 Sum_probs=53.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-----------ccCCC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-----------EHEPV 452 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-----------~~~~~ 452 (609)
.||+|+|||-.|..+|+.+++ .|- .-.++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~-----~g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAM-----NRE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-----CTT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-----CCC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 389999998766666665543 231 00368888874 111 2222212211 11222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 453 KELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 453 ~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
.++.++++..++|++|=+++. .+..+++++..+.. .++| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~g-~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRTG-VPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHHT-CCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHhC-CCEE-EecC
Confidence 468888998899999977653 24566776654433 3444 2444
No 172
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=81.89 E-value=0.72 Score=47.64 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=72.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc----CCchhcchhccccCC-CCCHHH
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE----SLQHFKKPWAHEHEP-VKELVD 457 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~----~L~~~k~~fA~~~~~-~~~L~e 457 (609)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+ .++.+ +|.+. .+|....-. ..+-.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~----~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~ 69 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVN----KEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE 69 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSC----HHHHHHHHHHHHHT-GGGSSSCCEEEEECGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecc----hHHHHHHHHHHHhc-cccccCCeEEEeCcHH
Confidence 46899999999999999888753 54 2589999973 11100 13332 333311000 112235
Q ss_pred HHhccCCcEEEEccCCC---CC-----C------CHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhcccc--CcEEE
Q 007301 458 AVNAIKPTILIGTSGQG---RT-----F------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQ--GRAIF 521 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~--Graif 521 (609)
+++. .|++|=+.+.+ |- | -+++++.+++++...+|+-.|||.. ...+-+++.+. -+-+|
T Consensus 70 a~~~--aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd---~~t~~~~k~~g~p~~rvi 144 (326)
T 3pqe_A 70 DCKD--ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVD---ILTYATWKFSGLPKERVI 144 (326)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH---HHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHH---HHHHHHHHhcCCCHHHEE
Confidence 6665 88877554433 31 1 2577788889999999999999973 33444444431 13345
Q ss_pred ecC
Q 007301 522 ASG 524 (609)
Q Consensus 522 ASG 524 (609)
.+|
T Consensus 145 G~g 147 (326)
T 3pqe_A 145 GSG 147 (326)
T ss_dssp ECT
T ss_pred eec
Confidence 554
No 173
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=81.71 E-value=9.1 Score=38.80 Aligned_cols=177 Identities=14% Similarity=0.108 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHh----------------CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEc
Q 007301 362 TASVVLAGLISAMKFL----------------GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (609)
Q Consensus 362 TaaV~LAgll~Alr~~----------------g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 425 (609)
+|=-+++-+|+..|.. ...|.+.+|.|+|.|..|..+|+.+... |+ +++.+|
T Consensus 85 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d 152 (290)
T 3gvx_A 85 VAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYT 152 (290)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEC
T ss_pred HHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEe
Confidence 4445667777666521 1458899999999999999999988753 64 688888
Q ss_pred ccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 426 SKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 426 s~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
+.. . .... + ....+|.|+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.-.
T Consensus 153 r~~----~---~~~~-----~---~~~~~l~ell~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG~ 212 (290)
T 3gvx_A 153 RSS----V---DQNV-----D---VISESPADLFRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARAD 212 (290)
T ss_dssp SSC----C---CTTC-----S---EECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCGG
T ss_pred ccc----c---cccc-----c---cccCChHHHhhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehhc
Confidence 742 1 1111 1 123589999987 88887432 234688999988886 677888777633
Q ss_pred CCCCCCHHHHhccccCcEEEecCCCC--CccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHccc
Q 007301 502 SQSECTAEEAYTWSQGRAIFASGSPF--DPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQV 579 (609)
Q Consensus 502 ~~aEct~e~A~~wT~GraifASGSPF--~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v 579 (609)
.--|---.+|+ .+|+.-.|.=--| +|. ..-=+..|..+-|=++=| ....-.+.|...+++-|..+.
T Consensus 213 ~vd~~aL~~aL--~~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHiag~----~t~e~~~~~~~~~~~ni~~~~ 280 (290)
T 3gvx_A 213 VVSKPDMIGFL--KERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVAGG----MSGEIMDIAIQLAFENVRNFF 280 (290)
T ss_dssp GBCHHHHHHHH--HHCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCSSC----BTTBCCHHHHHHHHHHHHHHT
T ss_pred ccCCcchhhhh--hhccceEEeeccccCCcc------cchhhhhhhhcCccccCC----ccchHHHHHHHHHHHHHHhhh
Confidence 11222222333 2344332211111 111 111345688888877611 223456788888888888876
Q ss_pred CcC
Q 007301 580 TQE 582 (609)
Q Consensus 580 ~~e 582 (609)
.-|
T Consensus 281 ~~~ 283 (290)
T 3gvx_A 281 EGE 283 (290)
T ss_dssp C--
T ss_pred cCC
Confidence 544
No 174
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.57 E-value=2.2 Score=45.94 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=59.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-----cccCCCCCHHHHH
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----HEHEPVKELVDAV 459 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-----~~~~~~~~L~e~V 459 (609)
||.|+|+|..|..+|..+... |. +++++|+.. ++ ++...+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 799999999999999888653 63 578888631 11 111111000 0011235788888
Q ss_pred hcc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 460 NAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 460 ~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
+.. +||++| ++...+...+++++.+... .+..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 754 488877 4443434567888777643 3456788888854
No 175
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=81.17 E-value=0.78 Score=42.61 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=58.8
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc---c--ccCCCCCHHHH
Q 007301 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---H--EHEPVKELVDA 458 (609)
Q Consensus 385 rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~--~~~~~~~L~e~ 458 (609)
||+|+| +|..|..+|..+.. .| .+++++|++ .++ ++..++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-----~g-------~~V~~~~r~----~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-----LG-------HEIVVGSRR----EEK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEESS----HHH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-----CC-------CEEEEEeCC----HHH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 799999 99999999988764 25 368888863 111 111111110 0 011 2478888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
++. .|++|=+.. + -..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 886 898884433 3 235677777654334678999999764
No 176
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=81.17 E-value=7.6 Score=40.10 Aligned_cols=186 Identities=14% Similarity=0.069 Sum_probs=106.0
Q ss_pred CCeeeecCC---cchHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHHh
Q 007301 351 THLVFNDDI---QGTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISKQ 409 (609)
Q Consensus 351 ~~~~FNDDi---QGTaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~ 409 (609)
.+++.|--- +.+|=-+++.+|+..|. .+..|.+.+|.|+|.|..|..+|+.+..
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~----- 186 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQS----- 186 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHT-----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHH-----
Confidence 566666532 23444567888887664 2567999999999999999999998753
Q ss_pred cCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHHH
Q 007301 410 TNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVEA 484 (609)
Q Consensus 410 ~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~~ 484 (609)
.|+ +++.+|+.. . .. .+.. .-...+|.|+++. .|+++=.- ...++|+++.++.
T Consensus 187 ~G~-------~V~~~d~~~----~------~~---~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 187 FGM-------KTIGYDPII----S------PE---VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp TTC-------EEEEECSSS----C------HH---HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred CCC-------EEEEECCCc----c------hh---hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 263 588888631 1 10 1111 1112479898886 89988542 2346788888888
Q ss_pred HHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEE-----ecCCCCCccccCCeecCCCCCcccccchhhhHHHHHhC
Q 007301 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIF-----ASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSG 559 (609)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~Graif-----ASGSPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~ 559 (609)
|. +..++.=.|.-.---|..-.+|. .+|+.-- -.+-|.++ ... =+..|..+-|=++-...
T Consensus 245 mk---~gailIN~arg~vvd~~aL~~aL--~~g~i~gA~lDV~~~EP~~~-----~~L--~~~~nvilTPH~~~~t~--- 309 (335)
T 2g76_A 245 CK---KGVRVVNCARGGIVDEGALLRAL--QSGQCAGAALDVFTEEPPRD-----RAL--VDHENVISCPHLGASTK--- 309 (335)
T ss_dssp SC---TTEEEEECSCTTSBCHHHHHHHH--HHTSEEEEEESCCSSSSCSC-----CHH--HHSTTEEECSSCTTCBH---
T ss_pred CC---CCcEEEECCCccccCHHHHHHHH--HhCCccEEEEeecCCCCCCC-----chH--HhCCCEEECCcCCCCCH---
Confidence 86 66788877762211111112232 2444321 12223110 111 13458888887663211
Q ss_pred CcccCHHHHHHHHHHHHcccC
Q 007301 560 AIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 560 a~~Itd~M~laAA~aLA~~v~ 580 (609)
.-...|...+++.|.....
T Consensus 310 --e~~~~~~~~~~~nl~~~~~ 328 (335)
T 2g76_A 310 --EAQSRCGEEIAVQFVDMVK 328 (335)
T ss_dssp --HHHHHHHHHHHHHHHHHC-
T ss_pred --HHHHHHHHHHHHHHHHHHc
Confidence 1124466666666666554
No 177
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=80.98 E-value=5.7 Score=41.36 Aligned_cols=189 Identities=15% Similarity=0.128 Sum_probs=113.4
Q ss_pred CCCeeeecC-C-cchHHHHHHHHHHHHHH----------------------------hCCCCCCceEEEeCcchHHHHHH
Q 007301 350 TTHLVFNDD-I-QGTASVVLAGLISAMKF----------------------------LGGSLADQRFLFLGAGEAGTGIA 399 (609)
Q Consensus 350 ~~~~~FNDD-i-QGTaaV~LAgll~Alr~----------------------------~g~~L~d~rivf~GAGsAg~GIA 399 (609)
..+++.|.- . ..+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|
T Consensus 97 ~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA 176 (352)
T 3gg9_A 97 KGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVA 176 (352)
T ss_dssp HTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHH
Confidence 356666622 2 23445577778877663 24678999999999999999999
Q ss_pred HHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCC
Q 007301 400 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGR 475 (609)
Q Consensus 400 ~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g 475 (609)
+.+... |+ +++.+|+.. .. + .... .......+|.|+++. .|+++=.- ...+
T Consensus 177 ~~l~~~-----G~-------~V~~~d~~~----~~-~---~~~~---~g~~~~~~l~ell~~--aDiV~l~~Plt~~t~~ 231 (352)
T 3gg9_A 177 GYGRAF-----GM-------NVLVWGREN----SK-E---RARA---DGFAVAESKDALFEQ--SDVLSVHLRLNDETRS 231 (352)
T ss_dssp HHHHHT-----TC-------EEEEECSHH----HH-H---HHHH---TTCEECSSHHHHHHH--CSEEEECCCCSTTTTT
T ss_pred HHHHhC-----CC-------EEEEECCCC----CH-H---HHHh---cCceEeCCHHHHHhh--CCEEEEeccCcHHHHH
Confidence 988542 64 688888741 00 0 0000 001122589999987 89888532 2347
Q ss_pred CCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEE------EecCCCCCccccCCeecCCCCCcccccch
Q 007301 476 TFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAI------FASGSPFDPFEYGDNVFVPGQANNAYIFP 549 (609)
Q Consensus 476 ~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~Grai------fASGSPF~pv~~~G~~~~p~Q~NN~yiFP 549 (609)
+|+++.++.|. +..++.=.|.-..--|---.+|++ +|+.- |.. -|.++ ... -=+..|+.+-|
T Consensus 232 li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~--~g~i~gA~lDV~~~-EPl~~----~~p--L~~~~nvilTP 299 (352)
T 3gg9_A 232 IITVADLTRMK---PTALFVNTSRAELVEENGMVTALN--RGRPGMAAIDVFET-EPILQ----GHT--LLRMENCICTP 299 (352)
T ss_dssp CBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH--HTSSSEEEECCCSS-SCCCS----CCG--GGGCTTEEECC
T ss_pred hhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH--hCCccEEEecccCC-CCCCC----CCh--hhcCCCEEECC
Confidence 89999999886 778888888744333443445544 35432 222 13221 000 11346899999
Q ss_pred hhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 550 GLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 550 GlglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
=+|-..- .--+.|...+++-|.....
T Consensus 300 Hia~~t~-----e~~~~~~~~~~~ni~~~~~ 325 (352)
T 3gg9_A 300 HIGYVER-----ESYEMYFGIAFQNILDILQ 325 (352)
T ss_dssp SCTTCBH-----HHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCH-----HHHHHHHHHHHHHHHHHHc
Confidence 8753211 1225567777777777664
No 178
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=80.75 E-value=1.4 Score=41.91 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=56.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHh
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 460 (609)
-...||.|+|+|..|..+|..+.. .|. +++++|++- + .+.. ++...-...++.++++
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~-----~g~-------~V~~~~r~~----~---~~~~----~~~~g~~~~~~~~~~~ 82 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVG-----SGF-------KVVVGSRNP----K---RTAR----LFPSAAQVTFQEEAVS 82 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSH----H---HHHH----HSBTTSEEEEHHHHTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHH-----CCC-------EEEEEeCCH----H---HHHH----HHHcCCceecHHHHHh
Confidence 345689999999999999988764 253 588887631 1 1111 1111111126888887
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCC
Q 007301 461 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTS 502 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 502 (609)
. +|++|=+. .+. ..+++++ ++...+.-+|.-+||+..
T Consensus 83 ~--~DvVi~av-~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 83 S--PEVIFVAV-FRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp S--CSEEEECS-CGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred C--CCEEEECC-ChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 5 89888433 332 3455654 433335678999999874
No 179
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=80.73 E-value=1.3 Score=42.56 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=57.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
+..||+|.|||-.|..+++.|++. | .+++.++++- +.+.+.-..+.-+..+..++.++++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~ 62 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL 62 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC
Confidence 356899999998888888877652 5 3677777641 11221111111122222345556664
Q ss_pred cCCcEEEEccCCCC-----------CCCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGR-----------TFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 63 -~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 -RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred -CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997664321 12567788877666567887544
No 180
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=80.66 E-value=1.2 Score=44.86 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=27.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 457999999999999999988753 63 57777763
No 181
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.65 E-value=2.5 Score=43.81 Aligned_cols=102 Identities=20% Similarity=0.199 Sum_probs=59.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCccc----CCCc--cCCchhcchhccccCCCCCHH
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIV----SSRL--ESLQHFKKPWAHEHEPVKELV 456 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~----~~R~--~~L~~~k~~fA~~~~~~~~L~ 456 (609)
..||.|+|+|+-|..+|..+... | .+++++|++--.. ..+. ..++..+ +.....-..++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 36899999999999999988753 5 3577777741100 0000 0011111 000000125788
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCCC
Q 007301 457 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPTS 502 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 502 (609)
|+++. +|++| ++. +--+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laV-p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVV-PSFAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECC-CHHHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECC-CHHHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88876 78776 333 2236788888887654 4667888888554
No 182
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.64 E-value=2.3 Score=43.57 Aligned_cols=110 Identities=11% Similarity=0.203 Sum_probs=60.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCC-CccCCchhcc--hhc------cccCCCCC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS-RLESLQHFKK--PWA------HEHEPVKE 454 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~-R~~~L~~~k~--~fA------~~~~~~~~ 454 (609)
.||.|+|+|..|..+|..+...-... . +-..+++++|+..-+... +.+.+..... .|- ....-..+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 48999999999999999998652110 0 000468888875321000 0011111000 000 00001246
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----c-CCCcEEEecCCCCC
Q 007301 455 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----L-NEKPIIFSLSNPTS 502 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 502 (609)
+.|+++. .|++| ++... -..+++++.+.. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7788875 78776 33222 467888888865 3 34568888998654
No 183
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=80.64 E-value=3.2 Score=44.61 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=59.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-hhc-cccCCCCCHHHHHhc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWA-HEHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA-~~~~~~~~L~e~V~~ 461 (609)
.||.|+|+|..|..+|..+... |. +++++|+.. + .++...+ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----H---HHHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999888653 63 578888631 1 1111111 000 000112578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHccC-CCcEEEecCCCC
Q 007301 462 I-KPTILIGTSGQGRTFTKEVVEAMASLN-EKPIIFSLSNPT 501 (609)
Q Consensus 462 v-kPtvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 501 (609)
+ +||++| ++...+...+++++.+...- +..||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488777 44444445778887776543 356788888854
No 184
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.48 E-value=1.8 Score=43.31 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=28.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+..-.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34446999999999999999998763 53 67788874
No 185
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=80.18 E-value=1.5 Score=44.97 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=53.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc----ccCCCCCHHHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----EHEPVKELVDAV 459 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----~~~~~~~L~e~V 459 (609)
-||+++|||-.|--+|+.|.. ...+.+.|... ++++..+ +++. +..+..+|.+.+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~-------~~~~~~~-~~~~~~~~d~~d~~~l~~~~ 75 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN-------ENLEKVK-EFATPLKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH-------HHHHHHT-TTSEEEECCTTCHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH-------HHHHHHh-ccCCcEEEecCCHHHHHHHH
Confidence 379999999988777766532 13566777531 1122211 2221 223334688888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+. .|++|-+ .|..|..+++++-.+... . ++-+|-
T Consensus 76 ~~--~DvVi~~--~p~~~~~~v~~~~~~~g~-~-yvD~s~ 109 (365)
T 3abi_A 76 KE--FELVIGA--LPGFLGFKSIKAAIKSKV-D-MVDVSF 109 (365)
T ss_dssp TT--CSEEEEC--CCGGGHHHHHHHHHHHTC-E-EEECCC
T ss_pred hC--CCEEEEe--cCCcccchHHHHHHhcCc-c-eEeeec
Confidence 86 7998854 455688899988665443 2 455663
No 186
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=79.90 E-value=8.8 Score=39.79 Aligned_cols=210 Identities=16% Similarity=0.129 Sum_probs=121.8
Q ss_pred eeeeecCCCCcHHHHHHHHcCCCeeeecCCc---chHHHHHHHHHHHHHHh------------------------C-CCC
Q 007301 330 LIQFEDFANHNAFDLLEKYGTTHLVFNDDIQ---GTASVVLAGLISAMKFL------------------------G-GSL 381 (609)
Q Consensus 330 lIqfEDf~~~nAf~lL~ryr~~~~~FNDDiQ---GTaaV~LAgll~Alr~~------------------------g-~~L 381 (609)
+|+.--.+..| .++-.--+..+.+.|---- .+|=-+++.+|+..|.. | ..|
T Consensus 88 ~I~~~~~G~d~-id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l 166 (347)
T 1mx3_A 88 IIVRIGSGFDN-IDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARI 166 (347)
T ss_dssp EEEESSSCCTT-BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCC
T ss_pred EEEEcccccCc-ccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCC
Confidence 46666666655 2322223456777775432 34445788888887721 1 468
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
.+.++.|+|.|..|..+|+.+.. .|+ +++.+|++- .. .. .+.+ ......+|.|+++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~-----~G~-------~V~~~d~~~----~~--~~---~~~~--g~~~~~~l~ell~~ 223 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKA-----FGF-------NVLFYDPYL----SD--GV---ERAL--GLQRVSTLQDLLFH 223 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEECTTS----CT--TH---HHHH--TCEECSSHHHHHHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHH-----CCC-------EEEEECCCc----ch--hh---Hhhc--CCeecCCHHHHHhc
Confidence 89999999999999999998754 364 588888631 10 01 0111 01112478899886
Q ss_pred cCCcEEEEcc----CCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEe-----cCCCCCcccc
Q 007301 462 IKPTILIGTS----GQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFA-----SGSPFDPFEY 532 (609)
Q Consensus 462 vkPtvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifA-----SGSPF~pv~~ 532 (609)
.|+++=.- ...++++++.++.|. +..+|.=.|.=..--|..-.+|+ .+|+.-.| ..-|+++
T Consensus 224 --aDvV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~EP~~~--- 293 (347)
T 1mx3_A 224 --SDCVTLHCGLNEHNHHLINDFTVKQMR---QGAFLVNTARGGLVDEKALAQAL--KEGRIRGAALDVHESEPFSF--- 293 (347)
T ss_dssp --CSEEEECCCCCTTCTTSBSHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHH--HHTSEEEEEESCCSSSSCCT---
T ss_pred --CCEEEEcCCCCHHHHHHhHHHHHhcCC---CCCEEEECCCChHHhHHHHHHHH--HhCCCcEEEEeecccCCCCC---
Confidence 89887532 234688888888885 66788878763322222223333 34544322 2333221
Q ss_pred CCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 533 GDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 533 ~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
.+.. -=..+|+.+-|=++-.. ....+.|...+++-+.....
T Consensus 294 ~~~~--L~~~~nvi~tPHia~~t-----~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 294 SQGP--LKDAPNLICTPHAAWYS-----EQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp TSST--TTTCSSEEECSSCTTCC-----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCch--HHhCCCEEEEchHHHHH-----HHHHHHHHHHHHHHHHHHHc
Confidence 1111 12478999999876422 22235566666666666653
No 187
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.79 E-value=1.5 Score=42.97 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=25.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999988753 5 367777763
No 188
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=79.79 E-value=1.6 Score=46.83 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhcCCCceeeeecCCCCcHHHHHHHHc-CCCee--eecCCcchHHHHHHHHHHHHHHhCC--------CCC
Q 007301 314 LHEFMTAVKQNYGERILIQFEDFANHNAFDLLEKYG-TTHLV--FNDDIQGTASVVLAGLISAMKFLGG--------SLA 382 (609)
Q Consensus 314 idEfv~Av~~~fGp~~lIqfEDf~~~nAf~lL~ryr-~~~~~--FNDDiQGTaaV~LAgll~Alr~~g~--------~L~ 382 (609)
+..+++.+...| ++ |.|+-+....-.++-++|. ..+|+ +|+..-+.+.....-|+..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 555566666667 44 5555444445567788995 35664 4666666676666667766543211 123
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
..+|+|+|||.||+..|..+.. .|+ ++.++|.
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~-----~G~-------~v~lie~ 243 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR-----KGI-------RTGLMGE 243 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECS
T ss_pred cccEEEECCcHHHHHHHHHHHh-----CCC-------eEEEEEC
Confidence 4679999999999999988754 363 5777775
No 189
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.67 E-value=1.5 Score=45.36 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 33 ~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 33 RLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 56788999999999999999999876 76 899999976
No 190
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.63 E-value=2.2 Score=41.73 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=54.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-.. .....++.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 111111110000 0011345566654
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc--CCCcEEEecCC
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASL--NEKPIIFSLSN 499 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSN 499 (609)
+|++| ++..+... +++++.+... .+..||.-+||
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~ 102 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGS 102 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCS
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCC
Confidence 77776 44434333 7788877654 45566666666
No 191
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=79.55 E-value=1.7 Score=42.62 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999998764 5 357788864
No 192
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=79.46 E-value=2 Score=39.74 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=58.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc-CCchh-----cchhcc-ccCCCCCH
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE-SLQHF-----KKPWAH-EHEPVKEL 455 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~-~L~~~-----k~~fA~-~~~~~~~L 455 (609)
++|+|.|| |-.|..+++.+++. .| -++++++++. + .++.. +..+.. +..+..++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL-------KTRIPPEIIDHERVTVIEGSFQNPGXL 67 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH-------HHHSCHHHHTSTTEEEEECCTTCHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc-------cccchhhccCCCceEEEECCCCCHHHH
Confidence 35999996 77777777777621 36 3688777641 1 12211 111111 22222467
Q ss_pred HHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 456 VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.++++. .|++|=+.+..+.-++.+++.|.+..-+-|||.=|
T Consensus 68 ~~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 68 EQAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 778875 89999877654333788899998776667887543
No 193
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=79.27 E-value=1.9 Score=42.72 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=25.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 6899999999999999888642 53 57888763
No 194
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=79.08 E-value=5.4 Score=42.58 Aligned_cols=71 Identities=25% Similarity=0.371 Sum_probs=48.1
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
--|++|+|+ |-+|.|.++.+.. .|.. ..++...|.+= ..++. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~-----lGa~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK-----VGIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH-----TTCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh-----CCCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 468999999 9999999888765 3641 11566666641 01110 11 23443
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHH
Q 007301 462 IKPTILIGTSGQ----GRTFTKEVVEAM 485 (609)
Q Consensus 462 vkPtvLIG~S~~----~g~Ft~evv~~M 485 (609)
.|++||+--. |.++|+|.|+.|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m 289 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNP 289 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcC
Confidence 8999998764 678999999998
No 195
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=78.98 E-value=5.4 Score=39.31 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=61.1
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCc---cCCchhcchhcc-ccCCCC
Q 007301 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL---ESLQHFKKPWAH-EHEPVK 453 (609)
Q Consensus 379 ~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~---~~L~~~k~~fA~-~~~~~~ 453 (609)
.++++.+|+|.|| |-.|..+++.|++ .| -+++++|+.. .... +.+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLP-----QG-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGG-----GT-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4678889999998 7777777766653 25 3688887731 1100 1110 111111 222223
Q ss_pred CHHHHHhccCCcEEEEccCCCCC-C------------CHHHHHHHHccCCCcEEEecC
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRT-F------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~-F------------t~evv~~Ma~~~erPIIFaLS 498 (609)
++.++++.+++|++|=+.+.... - +..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57778876679999988876532 0 345677776666667888544
No 196
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=78.91 E-value=2.2 Score=42.61 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=28.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+...||.|+|+|..|.++|..+... |. +++++|++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 41 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRS 41 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 34567999999999999999988753 63 57777763
No 197
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.90 E-value=1.9 Score=46.69 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=56.1
Q ss_pred HHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCc---EEEecCCCCCC--------CCCCHHHHhccccCcEEE-ecC
Q 007301 457 DAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKP---IIFSLSNPTSQ--------SECTAEEAYTWSQGRAIF-ASG 524 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erP---IIFaLSNPt~~--------aEct~e~A~~wT~Graif-ASG 524 (609)
++-+.++|+.+|-..+.. +. +..|++...+| |-.=.=||.+. .+-|.+++++.. +.++ +-|
T Consensus 151 ~l~~~~~~~aIlasnTSs--l~---i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~--~~l~~~lG 223 (460)
T 3k6j_A 151 NLENICKSTCIFGTNTSS--LD---LNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATA--FQACESIK 223 (460)
T ss_dssp HHHTTSCTTCEEEECCSS--SC---HHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSSCCHHHHHHH--HHHHHHTT
T ss_pred HHHhhCCCCCEEEecCCC--hh---HHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCCCCHHHHHHH--HHHHHHhC
Confidence 444556788777533322 33 34566555655 44444567643 122334444332 1122 122
Q ss_pred CCCCccccCCeecCCCCCcccccchhhhHHHHHhCCcccCHHHHHHHHH
Q 007301 525 SPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDMLLAAAE 573 (609)
Q Consensus 525 SPF~pv~~~G~~~~p~Q~NN~yiFPGlglG~l~s~a~~Itd~M~laAA~ 573 (609)
-.||..+ ..||+.-|-.++|.+.=++.+....-++.+.+..|.+
T Consensus 224 --k~~v~v~---d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 224 --KLPVLVG---NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp --CEEEEES---SCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred --CEEEEEe---cccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 1234443 3588888888888887777777333377777776654
No 198
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=78.83 E-value=2.6 Score=40.39 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=45.5
Q ss_pred CCCCceEEEeCc-ch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh----------cc
Q 007301 380 SLADQRFLFLGA-GE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW----------AH 447 (609)
Q Consensus 380 ~L~d~rivf~GA-Gs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f----------A~ 447 (609)
.++++++||.|| |+ .|..+|+.+++ .| -+++++|++- +.+...++.+ ..
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~ 79 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALL-----EG-------ADVVISDYHE-------RRLGETRDQLADLGLGRVEAVV 79 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHHTTCSSCEEEEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-----CC-------CEEEEecCCH-------HHHHHHHHHHHhcCCCceEEEE
Confidence 478899999999 74 77777777764 36 3588887641 1121211111 11
Q ss_pred -ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 448 -EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 448 -~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
|..+..++.++++.+ ++|+||=..+..
T Consensus 80 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 80 CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcC
Confidence 112223455666655 799999877654
No 199
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=78.40 E-value=1.5 Score=43.20 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999988753 53 67888864
No 200
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=78.33 E-value=5.3 Score=41.05 Aligned_cols=197 Identities=13% Similarity=0.107 Sum_probs=113.0
Q ss_pred CCCeeeecCC---cchHHHHHHHHHHHHHH--------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHH
Q 007301 350 TTHLVFNDDI---QGTASVVLAGLISAMKF--------------------LGGSLADQRFLFLGAGEAGTGIAELIALEI 406 (609)
Q Consensus 350 ~~~~~FNDDi---QGTaaV~LAgll~Alr~--------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~ 406 (609)
..+.+.|--- +.+|=-+++-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 4566665432 23455677777877653 2456899999999999999999988753
Q ss_pred HHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHH
Q 007301 407 SKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVV 482 (609)
Q Consensus 407 ~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv 482 (609)
.|+ +++.+|+... . ....+..-+ ...+|.|+++. .|+++=.- ...++++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~~~g~----~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQRLGL----RQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHHHHTE----EECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHHhcCc----eeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 364 5888887421 0 111110001 12479999987 88888542 23468999999
Q ss_pred HHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCeecCC-------CCCcccccchhhhHHH
Q 007301 483 EAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVP-------GQANNAYIFPGLGLGL 555 (609)
Q Consensus 483 ~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~~~p-------~Q~NN~yiFPGlglG~ 555 (609)
+.|. +..+|.=.|+-..--|---.+|+ .+|+.-.|-=-=|++-.+ .....| =+..|+.+-|=+|-..
T Consensus 224 ~~mk---~gailIN~arg~~vd~~aL~~aL--~~g~i~gA~lDV~~~E~~-~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGSVVDEAAVLAAL--ERGQLGGYAADVFEMEDW-ARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp TTSC---TTEEEEECSCGGGBCHHHHHHHH--HHTSEEEEEESCCGGGCT-TCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hhCC---CCcEEEECCCCchhCHHHHHHHH--HhCCccEEEecccccccc-cccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9886 67788888763321222222333 345544332111111100 000112 1345888888776422
Q ss_pred HHhCCcccCHHHHHHHHHHHHcccCcC
Q 007301 556 IMSGAIRVHDDMLLAAAEALAGQVTQE 582 (609)
Q Consensus 556 l~s~a~~Itd~M~laAA~aLA~~v~~e 582 (609)
. .-.+.|...+++-|.....-+
T Consensus 298 ~-----e~~~~~~~~~~~ni~~~~~g~ 319 (330)
T 4e5n_A 298 R-----AVRLEIERCAAQNILQALAGE 319 (330)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHTTS
T ss_pred H-----HHHHHHHHHHHHHHHHHHcCC
Confidence 2 223667777777777776543
No 201
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=78.21 E-value=4.1 Score=44.31 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=62.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc--CCCCCHHHHHh
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 460 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~ 460 (609)
..+|.|+|+|..|..+|..+... |. +++++|+. .+ ..+...+.-+... ....++.|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~g~~g~~i~~~~s~~e~v~ 64 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRT----VS---KVDDFLANEAKGTKVVGAQSLKEMVS 64 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----TH---HHHHHHHTTTTTSSCEECSSHHHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCC----HH---HHHHHHhcccCCCceeccCCHHHHHh
Confidence 35899999999999999888763 63 67888863 11 1211111111100 11368889887
Q ss_pred cc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 461 AI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 461 ~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
.+ +||++| ++-+.+.-++++++.+... .+..||.-.||-.
T Consensus 65 ~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 65 KLKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp TBCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 54 488776 4444444567788877654 4567888888843
No 202
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=78.08 E-value=8.1 Score=38.09 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=59.4
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh-cchhcc-ccCCCCCHH
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELV 456 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~ 456 (609)
.++..+|+|.|| |-.|..+++.+++ .| .+++.+|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLE-----RG-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH-----CC-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999995 7777777776654 25 4688887741 1111112211 111111 222224577
Q ss_pred HHHhccCCcEEEEccCCCCC-------------CCHHHHHHHHccCCCcEEEecC
Q 007301 457 DAVNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999988775432 1345777777665568888543
No 203
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=77.81 E-value=2.5 Score=42.87 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=27.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..||||+|+|.||+..|..|.+. |- .-+|.|+|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999988653 31 1368888865
No 204
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.78 E-value=3.9 Score=38.22 Aligned_cols=101 Identities=13% Similarity=0.086 Sum_probs=59.0
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-hhcc-ccCCCCCH
Q 007301 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-PWAH-EHEPVKEL 455 (609)
Q Consensus 379 ~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-~fA~-~~~~~~~L 455 (609)
.+|++.+|+|.|| |-.|..+++.+++ .| -++++++++. ++.+.+..... .+.. +.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKN-----KG-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHh-----CC-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4578899999998 7788878777764 36 3688887641 11111111111 1111 111 456
Q ss_pred HHHHhccCCcEEEEccCCCCC------------CCHHHHHHHHccCCCcEEEecCC
Q 007301 456 VDAVNAIKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
.++++ ++|++|=+.+.... -+..+++++.+..-+-|||.=|-
T Consensus 79 ~~~~~--~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 79 SHAFA--SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp GGGGT--TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHHHc--CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 67776 49999977765421 14567888877766778886553
No 205
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.63 E-value=1.9 Score=42.13 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999887642 53 57778763
No 206
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=77.50 E-value=1.6 Score=45.33 Aligned_cols=120 Identities=20% Similarity=0.230 Sum_probs=65.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc---cccCCCCCHHHH
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---HEHEPVKELVDA 458 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA---~~~~~~~~L~e~ 458 (609)
.+.||+|+|||-+|-.+|+.|++. .++.+.|++ .++ ++.....+. -+.....+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999988877531 357788773 222 222211121 011223568888
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCcc
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPF 530 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv 530 (609)
++. +|++|-+. .. .+..+++++-.+ ..=.++-+|.-....+.-.++|-+ .| +.+..|+-|+|-
T Consensus 75 l~~--~DvVIn~~-P~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG-~~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGAL-PG-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQ-VTIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECC-CH-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TT-CEEECSCBTTTB
T ss_pred HhC--CCEEEECC-Ch-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cC-CEEEECCCCcch
Confidence 885 89999763 22 356677665433 223356677622111122344433 34 333455546654
No 207
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=77.29 E-value=2.1 Score=42.49 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=26.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..||.|+|+|..|.++|..+... |. +++++|++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 35899999999999999988653 53 57788864
No 208
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=76.73 E-value=1.2 Score=46.06 Aligned_cols=121 Identities=17% Similarity=0.128 Sum_probs=72.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC---cccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG---LIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 384 ~rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G---Li~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.||++.| ||..|.-+|.+|+. .|+--|+-.-.+.|+|.+. .+.-...| |.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~-----~~~~~e~~~~~l~L~Di~~~~~~~~g~a~D-L~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGN-----GSVFGKDQPIILVLLDITPMMGVLDGVLME-LQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHT-----TTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHh-----CCCccccCCCEEEEEeCCCccccchhhHhh-hHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 79999998888764 2441010011289999852 21111112 4333234443222235688888
Q ss_pred hccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcE-EEecCCCCCCCCCCHHHHhccc
Q 007301 460 NAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPTSQSECTAEEAYTWS 515 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt~~aEct~e~A~~wT 515 (609)
+. .|++|=+.+.+ |- ..+++++++.+++.+-+ |+-.|||. .....-+++.+
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~ 143 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSA 143 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTC
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHc
Confidence 87 89888555443 21 24678888888988874 88899996 34444444444
No 209
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=76.72 E-value=3.1 Score=40.46 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=23.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 425 (609)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 3899999999999999888642 53 577776
No 210
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=76.30 E-value=2.7 Score=42.86 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=64.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCC--CCHHHHHhcc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPV--KELVDAVNAI 462 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~--~~L~e~V~~v 462 (609)
||.|+|||..|..+|-+|+.. |+ -..+.|+|.+-=...+-.-+|.+-. +|....... .+-.++++.
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~~-~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAA-AGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHH-GGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhccc-ccCCCCCeEecCCCHHHhCC-
Confidence 799999999999988887652 54 2569999974211111100133321 222111111 122245665
Q ss_pred CCcEEEEccCCCCC--CC------------HHHHHHHHccCCCcEEEecCCCC
Q 007301 463 KPTILIGTSGQGRT--FT------------KEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 463 kPtvLIG~S~~~g~--Ft------------~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|++|=+.+.+.. -| +++++.+++++...||+-.|||-
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 8998866665521 12 46788888999999999999997
No 211
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=76.13 E-value=4.1 Score=37.54 Aligned_cols=97 Identities=9% Similarity=0.163 Sum_probs=56.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
.||+|.|| |-.|..+++.|++ .| .++++++++. ++.+.+...-..+.-+..+..++.++++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-----RG-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-----TT-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHH-----CC-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 6666666666643 25 4788888752 11111211111111122233467788885
Q ss_pred CCcEEEEccCCCC----------CCCHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGR----------TFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999998765431 12556888888777667887544
No 212
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.11 E-value=2.9 Score=40.94 Aligned_cols=91 Identities=14% Similarity=0.215 Sum_probs=52.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
.||.|+|+ |..|..+|..+.. .|. +++++|++- +.+...+. + .-...++.|+++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-----~g~-------~V~~~~r~~-------~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-----SAH-------HLAAIEIAP-------EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----SSS-------EEEEECCSH-------HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-----CCC-------EEEEEECCH-------HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 9999999998864 252 688888631 11111111 0 0011244555654
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 777763 332322 56777776543 3345666677743
No 213
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=75.86 E-value=14 Score=38.75 Aligned_cols=115 Identities=10% Similarity=0.105 Sum_probs=64.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.++.+||+|+|.|.+|+..|+.+.+ .|. ++...|++-..... ..|. .-..+-.. ..-.+++
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g----~~~~~~~ 62 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTG----SLNDEWL 62 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEES----SCCHHHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEEC----CCcHHHh
Confidence 3567899999999999999866543 473 67788885321100 1122 11111100 1125667
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccCcEEEecCCCCCccccCCee
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNV 536 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~GraifASGSPF~pv~~~G~~ 536 (609)
+ .++.+|=.++.+- -.+++..+.. ...|++ +. .|-++...+.+.|-.||| ||||
T Consensus 63 ~--~~d~vV~s~gi~~-~~p~~~~a~~--~~~~v~-------~~----~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 63 M--AADLIVASPGIAL-AHPSLSAAAD--AGIEIV-------GD----IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp H--TCSEEEECTTSCT-TCHHHHHHHH--TTCEEE-------CH----HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred c--cCCEEEeCCCCCC-CCHHHHHHHH--CCCcEE-------EH----HHHHHHhcCCCEEEEECC-------CCHH
Confidence 6 4788775555542 3566665443 233433 11 233444456788888996 6774
No 214
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=75.86 E-value=6 Score=38.46 Aligned_cols=101 Identities=14% Similarity=0.284 Sum_probs=57.6
Q ss_pred CCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCcc--CCchh----cchhcc-ccCCCC
Q 007301 382 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLE--SLQHF----KKPWAH-EHEPVK 453 (609)
Q Consensus 382 ~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~--~L~~~----k~~fA~-~~~~~~ 453 (609)
++.+|+|.|| |-.|..+++.|++ .| .+++++|++. +..+ .+... +..+.. +..+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 65 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLE-----KG-------YEVYGADRRS----GEFASWRLKELGIENDVKIIHMDLLEFS 65 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECSCC----STTTTHHHHHTTCTTTEEECCCCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEECCC----cccccccHhhccccCceeEEECCCCCHH
Confidence 4678999998 7777777777654 35 3688887642 1100 01000 111111 212224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC------C----------CHHHHHHHHccCC-CcEEEecC
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRT------F----------TKEVVEAMASLNE-KPIIFSLS 498 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 498 (609)
++.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 66 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 57788888899999998875421 0 3445566555443 67888644
No 215
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=75.75 E-value=1.8 Score=45.07 Aligned_cols=107 Identities=15% Similarity=0.302 Sum_probs=64.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc-CCCCCHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH-EPVKELVDA 458 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~-~~~~~L~e~ 458 (609)
+...||.|+|| |..|..+|-.++. .|+ ...+.|+|.+-=..++-.-+|.+. .|.... .-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999865544 365 247999997310000000013322 231100 011578889
Q ss_pred HhccCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcE-EEecCCCC
Q 007301 459 VNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPI-IFSLSNPT 501 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPI-IFaLSNPt 501 (609)
++. .|++|=+.+.+ |- .-+++++.+.+++..-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 987 89888554433 21 23466777888998885 88899996
No 216
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.31 E-value=7.5 Score=38.18 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=58.1
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHH
Q 007301 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (609)
Q Consensus 379 ~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 457 (609)
++++..+|+|.|| |-.|..+++.|++ .| -+++.+|+.. .. ..+.. +.-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~~-~~~~~----~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRT-----QG-------RTVRGFDLRP----SG-TGGEE----VVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEESSC----CS-SCCSE----EESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC----CC-CCccE----EecCcCCHHHHHH
Confidence 4577889999998 8888888877765 35 3677777641 11 11111 1112222345778
Q ss_pred HHhccCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecC
Q 007301 458 AVNAIKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 498 (609)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 887 599999887654321 345788888777778998655
No 217
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.29 E-value=11 Score=38.79 Aligned_cols=93 Identities=17% Similarity=0.336 Sum_probs=49.1
Q ss_pred HHHHHHHhC-CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc
Q 007301 370 LISAMKFLG-GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE 448 (609)
Q Consensus 370 ll~Alr~~g-~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~ 448 (609)
.+.|+.... ..-.+++|+|+|||..|...+.+.. ..|. ++++.+|+. +.+..+++.
T Consensus 200 a~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak-----~~Ga------~~Vi~~~~~------------~~~~~~~~~ 256 (404)
T 3ip1_A 200 AYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILK-----HAGA------SKVILSEPS------------EVRRNLAKE 256 (404)
T ss_dssp HHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHH-----HTTC------SEEEEECSC------------HHHHHHHHH
T ss_pred HHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-----HcCC------CEEEEECCC------------HHHHHHHHH
Confidence 344444333 3446789999999877765544432 2474 578888753 112223321
Q ss_pred -------cCCCCCHHHHHhc----cCCcEEEEccCCCCCCCHHHHHHH
Q 007301 449 -------HEPVKELVDAVNA----IKPTILIGTSGQGRTFTKEVVEAM 485 (609)
Q Consensus 449 -------~~~~~~L~e~V~~----vkPtvLIG~S~~~g~Ft~evv~~M 485 (609)
.....++.+.|+. -+.|+.|-+++......+..++.+
T Consensus 257 lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 257 LGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp HTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred cCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 0111355555554 368898877764311223344444
No 218
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=75.25 E-value=5 Score=40.26 Aligned_cols=87 Identities=20% Similarity=0.264 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW 445 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f 445 (609)
.++..+.+++..... .+++++|+|||..|..++.+... .|. ++++.+|+. .+| ++..++.
T Consensus 149 ~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l- 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY- 208 (343)
T ss_dssp HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT-
T ss_pred HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh-
Confidence 344445666623333 88999999998777666554432 363 478888863 111 2111221
Q ss_pred cccc--CCCCCHHHHHhcc---CCcEEEEccC
Q 007301 446 AHEH--EPVKELVDAVNAI---KPTILIGTSG 472 (609)
Q Consensus 446 A~~~--~~~~~L~e~V~~v---kPtvLIG~S~ 472 (609)
|... ....++.+.++.. +.|++|=+++
T Consensus 209 a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 209 ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp CSEEECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred HHhccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 3210 1113566666532 5788887765
No 219
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=75.01 E-value=1.7 Score=43.17 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=59.7
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc---h---hcchhcc-ccCC
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ---H---FKKPWAH-EHEP 451 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~---~---~k~~fA~-~~~~ 451 (609)
+++..+|+|.|| |-.|..|++.|++ .| .+++.++++.- ...+.+. . ....+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~-----~g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLD-----AH-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 355679999999 8888888887764 25 36888877520 0000010 0 0111111 1222
Q ss_pred CCCHHHHHhccCCcEEEEccCCCC-CCCHHHHHHHHccC-CCcEEE
Q 007301 452 VKELVDAVNAIKPTILIGTSGQGR-TFTKEVVEAMASLN-EKPIIF 495 (609)
Q Consensus 452 ~~~L~e~V~~vkPtvLIG~S~~~g-~Ft~evv~~Ma~~~-erPIIF 495 (609)
..+|.++++..++|++|=+.+..+ .-+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 346888898677999998876532 23678999988766 555665
No 220
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=74.92 E-value=3.2 Score=35.12 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=25.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-----~g-------~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-----KG-------HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 3589999999999999888754 25 368888873
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=74.91 E-value=2.6 Score=37.29 Aligned_cols=34 Identities=6% Similarity=0.143 Sum_probs=27.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+.+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 456899999999999999888652 5 468888874
No 222
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=74.69 E-value=1.4 Score=45.77 Aligned_cols=128 Identities=18% Similarity=0.242 Sum_probs=74.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc--CCCCCHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVD 457 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e 457 (609)
+....||.++|||..|.++|-.++.. |+ ...+.|+|.+-=..+.-.-+|.+. .+|.... ....+. +
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~-~ 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDY-S 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSG-G
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCH-H
Confidence 34567999999999999999888652 54 257999997410000000013221 1232210 011344 3
Q ss_pred HHhccCCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccC--cEEE
Q 007301 458 AVNAIKPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG--RAIF 521 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~G--raif 521 (609)
+++. .|++|=+.+.+ | +| -+++.+.|+++++.-+|+-.|||.. ...+-+++.+.= +-+|
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd---i~t~~~~k~sg~p~~rvi 158 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVD---ILTYVAWKISGFPKNRVI 158 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHH---HHHHHHHHHhCCCHHHEE
Confidence 5666 88887444433 2 12 2577888899999999999999973 334445554411 2355
Q ss_pred ecC
Q 007301 522 ASG 524 (609)
Q Consensus 522 ASG 524 (609)
.+|
T Consensus 159 G~g 161 (331)
T 4aj2_A 159 GSG 161 (331)
T ss_dssp ECT
T ss_pred eec
Confidence 554
No 223
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.45 E-value=5.7 Score=40.23 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... |. ..+++++|++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECC
Confidence 7999999999999999888753 64 1478888874
No 224
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=74.36 E-value=15 Score=37.86 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=107.9
Q ss_pred CCeeeecCCc---chHHHHHHHHHHHHHH-------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHHH
Q 007301 351 THLVFNDDIQ---GTASVVLAGLISAMKF-------------------LGGSLADQRFLFLGAGEAGTGIAELIALEISK 408 (609)
Q Consensus 351 ~~~~FNDDiQ---GTaaV~LAgll~Alr~-------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~ 408 (609)
.+.+.|-.-- .+|=-+++.+|+..|. .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~f--- 163 (334)
T 3kb6_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecCcEEEEECcchHHHHHHHhhccc---
Confidence 4555554332 2344456677766542 24578899999999999999999887543
Q ss_pred hcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEc----cCCCCCCCHHHHHH
Q 007301 409 QTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGT----SGQGRTFTKEVVEA 484 (609)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~----S~~~g~Ft~evv~~ 484 (609)
|+ +++.+|.. .+ + ..... .....+|.|.++. .|+++=. ....++|+++.++.
T Consensus 164 --g~-------~v~~~d~~-----~~-~---~~~~~----~~~~~~l~ell~~--sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 164 --GM-------KVLCYDVV-----KR-E---DLKEK----GCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSS-----CC-H---HHHHT----TCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --Cc-------eeeecCCc-----cc-h---hhhhc----CceecCHHHHHhh--CCEEEEcCCCChhhccCcCHHHHhh
Confidence 64 57777753 11 1 11111 1123579999987 8988743 23347999999999
Q ss_pred HHccCCCcEEEecCCCCCCCCCCHHHHhcc--ccCcEEEecCCCCCcccc-CCeecC-------------CCCCcccccc
Q 007301 485 MASLNEKPIIFSLSNPTSQSECTAEEAYTW--SQGRAIFASGSPFDPFEY-GDNVFV-------------PGQANNAYIF 548 (609)
Q Consensus 485 Ma~~~erPIIFaLSNPt~~aEct~e~A~~w--T~GraifASGSPF~pv~~-~G~~~~-------------p~Q~NN~yiF 548 (609)
|. +..++.=.|. -++-=|+|+-. ..|+.--|.=-=|++--. ....+. --+..|+.+-
T Consensus 220 mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvilT 292 (334)
T 3kb6_A 220 MK---DGVYLINTAR----GKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp SC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred cC---CCeEEEecCc----cccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEEC
Confidence 96 5667665443 55555554422 356554332111111000 000000 1135689999
Q ss_pred hhhhHHHHHhCCcccCHHHHHHHHHHHHcccC
Q 007301 549 PGLGLGLIMSGAIRVHDDMLLAAAEALAGQVT 580 (609)
Q Consensus 549 PGlglG~l~s~a~~Itd~M~laAA~aLA~~v~ 580 (609)
|=+|-...-+ -..|...+++.|...+.
T Consensus 293 PHia~~T~ea-----~~~~~~~~~~ni~~~l~ 319 (334)
T 3kb6_A 293 PHIAYYTDKS-----LERIREETVKVVKAFVK 319 (334)
T ss_dssp CSCTTCBHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CchhhChHHH-----HHHHHHHHHHHHHHHHc
Confidence 9876322211 14455666666666553
No 225
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=74.13 E-value=5.7 Score=39.82 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=27.6
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..||.|+|+|..|.++|..+... |. ++++++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 36899999999999999998764 53 478888873
No 226
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=73.88 E-value=2.1 Score=46.04 Aligned_cols=37 Identities=27% Similarity=0.497 Sum_probs=32.7
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.|++.||+++|||..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 37 ~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 37 LLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 45788999999999999999999875 86 799999976
No 227
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.79 E-value=2.1 Score=38.91 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=28.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
++.+.+|+|+|+|..|..+|+.+... .| .+++++|++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~ 72 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIR 72 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECC
Confidence 35677999999999999999887542 14 368888874
No 228
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=72.72 E-value=2.5 Score=41.31 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... |. +++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----GY-------SLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----CC-------EEEEEeCC
Confidence 3899999999999999888642 52 57888764
No 229
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=72.71 E-value=11 Score=36.57 Aligned_cols=93 Identities=12% Similarity=0.214 Sum_probs=58.5
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
.||+|.|| |-.|..+++.|++ .| .+++.+++. .+..+ +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKN-----DG-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 8888888877765 25 368888875 22211 22 111211 222 345777777
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRT------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++|++|=+.+..+. -|..+++++.+.+-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 69999988776532 1467888888777667888544
No 230
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=72.59 E-value=18 Score=35.83 Aligned_cols=101 Identities=16% Similarity=0.225 Sum_probs=61.7
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch-hcchhcc-ccC-CCCCH
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-FKKPWAH-EHE-PVKEL 455 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~-~k~~fA~-~~~-~~~~L 455 (609)
.+...||+|.|| |-.|..+++.|++. .| -+++.+|+.. ++...+.. ....+.. +.. +...+
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 466789999996 88888888777653 24 4688888742 11111111 1112222 222 23457
Q ss_pred HHHHhccCCcEEEEccCCCC----------------CCCHHHHHHHHccCCCcEEEecC
Q 007301 456 VDAVNAIKPTILIGTSGQGR----------------TFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 456 ~e~V~~vkPtvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.++++. +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778875 999997666432 23567899988877 88998655
No 231
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=72.52 E-value=1.6 Score=45.44 Aligned_cols=124 Identities=15% Similarity=0.179 Sum_probs=72.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc--CCCCCHHHHHh
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH--EPVKELVDAVN 460 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~--~~~~~L~e~V~ 460 (609)
..||.|+|||..|.++|..++.. |+ -..+.|+|.+-=..++-.-+|.+. .+|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 46999999999999999988763 65 257999997310000000012221 1332210 01134543 55
Q ss_pred ccCCcEEEEccCCC---C-----CC------CHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccC---cEEEec
Q 007301 461 AIKPTILIGTSGQG---R-----TF------TKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG---RAIFAS 523 (609)
Q Consensus 461 ~vkPtvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~G---raifAS 523 (609)
. .|++|=+.+.+ | +| -+++++.+.++++.-+|+-.|||.. ....-+++.+ | +-+|.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvd---i~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGT---DKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH---HHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccH---HHHHHHHHHh-CCCHHHeecc
Confidence 5 89888443333 3 11 2567778889999999999999972 3344455544 2 335555
Q ss_pred C
Q 007301 524 G 524 (609)
Q Consensus 524 G 524 (609)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 4
No 232
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=72.20 E-value=3.4 Score=41.72 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|.++|..+... |. .+++++|++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999988753 51 368888875
No 233
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=72.17 E-value=3 Score=41.09 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+|+|+|||.||+..|..+.+ .|. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~-----~g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKD-----FGI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHH-----cCC------CcEEEEecCC
Confidence 4689999999999999998854 353 2799999874
No 234
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=71.86 E-value=3.3 Score=41.14 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=24.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
-||+|+|||.||+-.|-.|.. .|+ ++.++|+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-----~G~-------~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-----HGI-------KVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEec
Confidence 389999999999999887765 475 4666665
No 235
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=71.48 E-value=18 Score=35.08 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=44.5
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHH
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 457 (609)
..+++++++||.||++ ||...|+..+.+ .| -+++++|++. +.+......+.-+.....++.+
T Consensus 9 ~~~~~~k~vlVTGas~---GIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~Dv~~~~~v~~ 70 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSS---GIGLAVVDALVR-YG-------AKVVSVSLDE-------KSDVNVSDHFKIDVTNEEEVKE 70 (269)
T ss_dssp -CTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESCC---------CTTSSEEEECCTTCHHHHHH
T ss_pred ccCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc-------hhccCceeEEEecCCCHHHHHH
Confidence 4578899999999864 444455555554 36 3588887642 1121111112222222234556
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 007301 458 AVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 458 ~V~~v-----kPtvLIG~S~~~ 474 (609)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 71 AVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCcC
Confidence 66655 899999777654
No 236
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=70.91 E-value=2.5 Score=37.17 Aligned_cols=32 Identities=16% Similarity=0.393 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|+|..|..+|+.|.. .| .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-----~g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-----SD-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEECC
Confidence 478999999999999998865 25 368899884
No 237
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=70.67 E-value=12 Score=38.67 Aligned_cols=92 Identities=17% Similarity=0.343 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCceEEEeCcch-HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch
Q 007301 362 TASVVLAGLISAMKFLGGSLADQRFLFLGAGE-AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH 440 (609)
Q Consensus 362 TaaV~LAgll~Alr~~g~~L~d~rivf~GAGs-Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~ 440 (609)
-.-++-.|++--|+..+.+|+..++|++|.+. .|.-+|-||.. .|. .+.++.++
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34567789999999999999999999999765 57777777654 243 35555442
Q ss_pred hcchhccccCCCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEec
Q 007301 441 FKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSL 497 (609)
Q Consensus 441 ~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 497 (609)
.++|.+.++. +|+||...+.++.++.|+|+ +.-+|.=.
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDV 250 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDA 250 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEEC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEe
Confidence 1468888887 99999999999999999997 55566543
No 238
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=70.66 E-value=7.6 Score=36.87 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=56.2
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
.++..+|+|.|| |-.|..+++.|.+ .|.. ..... ..+...+ -+..+..++.++
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~-----~g~~---~~~~~--------------~~~~~~~----~D~~d~~~~~~~ 56 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVAD-----GAGL---PGEDW--------------VFVSSKD----ADLTDTAQTRAL 56 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHT-----TTCC---TTCEE--------------EECCTTT----CCTTSHHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHh-----cCCc---ccccc--------------cccCcee----cccCCHHHHHHH
Confidence 366789999996 8888888777764 3530 00000 0011001 011122458888
Q ss_pred HhccCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 459 VNAIKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 57 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 57 FEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 998899999988776431 1235788887777677888544
No 239
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=70.24 E-value=6.8 Score=37.54 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=18.2
Q ss_pred eEEEeCcchHHHHHHHHHHH
Q 007301 385 RFLFLGAGEAGTGIAELIAL 404 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~ 404 (609)
||.|+|+|..|..+|..+..
T Consensus 2 ~I~iIG~G~mG~~la~~l~~ 21 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS 21 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHH
Confidence 79999999999999998865
No 240
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=69.91 E-value=10 Score=37.69 Aligned_cols=96 Identities=17% Similarity=0.228 Sum_probs=51.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh-cchhc-------ccc-CCCCC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWA-------HEH-EPVKE 454 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~-k~~fA-------~~~-~~~~~ 454 (609)
.||.|+|+|..|..+|..+... | .+++++|++.= +.+.+... ...+- ... ....+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ----RIKEIQDRGAIIAEGPGLAGTAHPDLLTSD 68 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHTSEEEESSSCCEEECCSEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH----HHHHHHhcCCeEEeccccccccccceecCC
Confidence 5899999999999999887642 5 35778876410 00001000 00000 000 01246
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCC
Q 007301 455 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSN 499 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 499 (609)
+.|+++. +|++|=+.. . ...+++++.++.. .+..+|+.+.|
T Consensus 69 ~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 69 IGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp HHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred HHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 7777764 777663322 2 2357777777653 33455555544
No 241
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=69.87 E-value=17 Score=35.08 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=54.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
+|+|.|| |-.|..+++.|++ .| .++.++.. ...+.+.+...-..+.-+..+ .++.++++ +
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~-----~g--------~~v~~~~~---~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~ 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSE-----SN--------EIVVIDNL---SSGNEEFVNEAARLVKADLAA-DDIKDYLK--G 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-----TS--------CEEEECCC---SSCCGGGSCTTEEEECCCTTT-SCCHHHHT--T
T ss_pred EEEEECCCchHHHHHHHHHHh-----CC--------CEEEEEcC---CCCChhhcCCCcEEEECcCCh-HHHHHHhc--C
Confidence 7899997 7677777666643 23 34444432 111111121111111123334 67888888 5
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 464 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 464 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|-+.+.... -|..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988875421 1234778887777778998655
No 242
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=69.60 E-value=3.3 Score=40.13 Aligned_cols=34 Identities=12% Similarity=0.377 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+|+|+|||.||+..|..+.+ .|+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~-----~g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRR-----SGL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----SSC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 4689999999999999988864 363 689999864
No 243
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=69.51 E-value=11 Score=41.16 Aligned_cols=100 Identities=14% Similarity=0.258 Sum_probs=55.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-c--cCCCCC-HHH
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-E--HEPVKE-LVD 457 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~--~~~~~~-L~e 457 (609)
-+.|||++|||..|-++|.+|++- .++. ..+|.+.|++- .+.+-.......+.. . ..+... |..
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~----~~~~~~~~~g~~~~~~~Vdadnv~~~l~a 79 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEG----TKVDVAQQYGVSFKLQQITPQNYLEVIGS 79 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSC----CSCCHHHHHTCEEEECCCCTTTHHHHTGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccch----hhhhHHhhcCCceeEEeccchhHHHHHHH
Confidence 357899999999999999999874 3431 24688888741 111101111112221 1 111112 223
Q ss_pred HHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 458 AVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+++. +|++|=+| ...++.+++++-.+. .=-.+-++|
T Consensus 80 Ll~~--~DvVIN~s--~~~~~l~Im~aclea--Gv~YlDTa~ 115 (480)
T 2ph5_A 80 TLEE--NDFLIDVS--IGISSLALIILCNQK--GALYINAAT 115 (480)
T ss_dssp GCCT--TCEEEECC--SSSCHHHHHHHHHHH--TCEEEESSC
T ss_pred HhcC--CCEEEECC--ccccCHHHHHHHHHc--CCCEEECCC
Confidence 4543 59999655 346788888876532 223455555
No 244
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=68.90 E-value=7.3 Score=37.75 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=54.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|+|..|..+|..+.. .|.. .+++++|++. +.++..++.-+.. ....++.|+++. +
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~-----~g~~-----~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~-~ 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR-----SGFK-----GKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDF-S 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-----TTCC-----SEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGT-C
T ss_pred cEEEEEecCHHHHHHHHHHHh-----cCCC-----cEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcC-C
Confidence 379999999999999988864 2531 3688888741 1111111000000 002356666662 3
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHc-cCCCcEEEecCCCC
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSNPT 501 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNPt 501 (609)
+|++| ++..+ ..+.++++.+.. ..+..+|.-+||-.
T Consensus 63 aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 78777 33333 246677776654 33455777677743
No 245
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=68.76 E-value=3.2 Score=46.95 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=33.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.|++.||+++|+|..|.-+|+.|+.+ |+ ++|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 46789999999999999999999875 76 799999986
No 246
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=68.61 E-value=6.1 Score=40.48 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=65.0
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCC--CCCHHHHHhc
Q 007301 385 RFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEP--VKELVDAVNA 461 (609)
Q Consensus 385 rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~--~~~L~e~V~~ 461 (609)
||.|+| +|..|..+|-+|... .++ ...+.|+|..-. ..+-.-+|.+. ++-..... ..+..++.+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999998777442 244 267999999741 11111013221 11000000 0246788887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHccCCCcEEEecCCCC
Q 007301 462 IKPTILIGTSGQG---RT-----------FTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 462 vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
.|+.|=+.+.+ |- .-+++++.+++++..-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988666544 21 1256777888899999999999997
No 247
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=68.31 E-value=4.5 Score=38.25 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+..|..+.. .| .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR-----AR-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCC
Confidence 589999999999999988865 35 368999974
No 248
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=68.26 E-value=8.5 Score=37.34 Aligned_cols=79 Identities=11% Similarity=0.144 Sum_probs=44.1
Q ss_pred CCCCceEEEeCcc-h--HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc------cccC
Q 007301 380 SLADQRFLFLGAG-E--AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HEHE 450 (609)
Q Consensus 380 ~L~d~rivf~GAG-s--Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA------~~~~ 450 (609)
.+++.++||.||. . .|..+|+.+++ .| -+++++|++-+ . +.+...++.+. -|..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999984 3 45555655543 36 36888888640 0 11212111111 1222
Q ss_pred CCCCHHHHHhcc-----CCcEEEEccCCCC
Q 007301 451 PVKELVDAVNAI-----KPTILIGTSGQGR 475 (609)
Q Consensus 451 ~~~~L~e~V~~v-----kPtvLIG~S~~~g 475 (609)
...++.++++.+ ++|+||=..+...
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 115 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFAP 115 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCC
Confidence 223455556555 7999998877653
No 249
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=68.26 E-value=12 Score=36.22 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=57.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
.+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+.. ...+.. +..+..++.++++.
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~ 65 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVD-----EG-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQ 65 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhh
Confidence 37899986 7777777777654 25 3677777631 110111221 111211 22222457777875
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 66 ~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 66 ENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp SCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 679999988775431 1345677777666567888544
No 250
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=67.72 E-value=6.3 Score=37.77 Aligned_cols=86 Identities=12% Similarity=0.276 Sum_probs=54.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
||+|.|| |-.|..+++.++ . | .+++.+|++.-. +.-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~--------------~~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKE--------------FCGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSS--------------SCCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEecccccc--------------ccccCCCHHHHHHHHHhcC
Confidence 7899998 877877777664 2 4 468888765310 1011112235778888788
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 464 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 464 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+.+.... .+..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999998875431 14567777765544 5887544
No 251
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=70.90 E-value=1.1 Score=42.60 Aligned_cols=92 Identities=12% Similarity=0.119 Sum_probs=53.6
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHh
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 460 (609)
+.+.||.|+|+|..|..+|..+... | .+++++|+.-- + +.+ +...-...++.|+++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999888653 4 24666766311 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCC
Q 007301 461 AIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPT 501 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 501 (609)
. +|++| ++..+. -++++++ ++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~~-l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLAE-LADSLKGRVLIDVSNNQ 108 (201)
Confidence 4 67666 333332 3556652 33333456888899976
No 252
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=67.52 E-value=24 Score=38.38 Aligned_cols=121 Identities=20% Similarity=0.134 Sum_probs=78.2
Q ss_pred cCCCeeeecCCc---chHHHHHHHHHHHHHH------------------hCCCCCCceEEEeCcchHHHHHHHHHHHHHH
Q 007301 349 GTTHLVFNDDIQ---GTASVVLAGLISAMKF------------------LGGSLADQRFLFLGAGEAGTGIAELIALEIS 407 (609)
Q Consensus 349 r~~~~~FNDDiQ---GTaaV~LAgll~Alr~------------------~g~~L~d~rivf~GAGsAg~GIA~li~~~~~ 407 (609)
+..+.+.|---- .+|=-++|-+|+..|. .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 87 ~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~--- 163 (529)
T 1ygy_A 87 ARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAA--- 163 (529)
T ss_dssp HTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHT---
T ss_pred hCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHh---
Confidence 345666665432 3444578888887663 2467899999999999999999998754
Q ss_pred HhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEcc----CCCCCCCHHHHH
Q 007301 408 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTS----GQGRTFTKEVVE 483 (609)
Q Consensus 408 ~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S----~~~g~Ft~evv~ 483 (609)
.|+ +++.+|+.- .+ + . .....-...++.|+++. .|+++=.- ...++++++.+.
T Consensus 164 --~G~-------~V~~~d~~~----~~-~---~----a~~~g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~ 220 (529)
T 1ygy_A 164 --FGA-------YVVAYDPYV----SP-A---R----AAQLGIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALA 220 (529)
T ss_dssp --TTC-------EEEEECTTS----CH-H---H----HHHHTCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHT
T ss_pred --CCC-------EEEEECCCC----Ch-h---H----HHhcCcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHh
Confidence 253 688888641 11 0 0 00001111378899986 89887543 334677777776
Q ss_pred HHHccCCCcEEEecC
Q 007301 484 AMASLNEKPIIFSLS 498 (609)
Q Consensus 484 ~Ma~~~erPIIFaLS 498 (609)
.|. +..+|.=.|
T Consensus 221 ~~k---~g~ilin~a 232 (529)
T 1ygy_A 221 KTK---PGVIIVNAA 232 (529)
T ss_dssp TSC---TTEEEEECS
T ss_pred CCC---CCCEEEECC
Confidence 664 567888777
No 253
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=67.50 E-value=7.9 Score=39.31 Aligned_cols=41 Identities=20% Similarity=0.343 Sum_probs=27.0
Q ss_pred HHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCC
Q 007301 455 LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 455 L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
+...++..|||++||..+.. --.....|+....|+|.=-+|
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~----s~p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYV----TGPGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHHCCSEEEECSSST----HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHhcCCCEEEEcCCcc----hHHHHHHHHHcCCCEEEEecc
Confidence 34568889999999976533 222223355668899975555
No 254
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.46 E-value=5 Score=41.09 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
++|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-----AKYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHh-----hCcC-----CCEEEEeCCC
Confidence 589999999999999998865 3641 3799999865
No 255
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.27 E-value=11 Score=34.84 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=56.9
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 458 (609)
++..+++|.|| |-.|..+++.+++. |. ..+++++|++. ++.+.+......+.. +..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44678999996 66677777766543 52 12788888742 111111111111111 21222356666
Q ss_pred HhccCCcEEEEccCCCCC-------------CCHHHHHHHHccCCCcEEEecC
Q 007301 459 VNAIKPTILIGTSGQGRT-------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++ ++|++|=+.+.... -+..++++|.+...+-|||.=|
T Consensus 82 ~~--~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQ--GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GS--SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hc--CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 66 58999988775310 1356777887666567887544
No 256
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=67.09 E-value=12 Score=36.07 Aligned_cols=98 Identities=17% Similarity=0.271 Sum_probs=55.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhcc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 462 (609)
||+|.|| |-.|..+++.+++ .| .+++++|+.- ....+.+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLA-----RG-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHH-----CC-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6899997 6667667666653 35 3577777521 111111211 111111 212223577788766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++|++|=+.+..+. -+..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 89999988775431 0345677776665567888544
No 257
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=66.92 E-value=15 Score=34.90 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=43.7
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHH
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVD 457 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e 457 (609)
..++++.+++|.||+. ||...++..+.+ .| -+++++|++- + .+.... .+.-+..+..++.+
T Consensus 10 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~-~~~~D~~~~~~~~~ 70 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNR---GIGLAIAQRLAA-DG-------HKVAVTHRGS----G---APKGLF-GVEVDVTDSDAVDR 70 (247)
T ss_dssp CCCCCCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----C---CCTTSE-EEECCTTCHHHHHH
T ss_pred cccCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---HHHHhc-CeeccCCCHHHHHH
Confidence 4468889999999753 444555555554 36 3688887741 1 122111 12112222234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 007301 458 AVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 458 ~V~~v-----kPtvLIG~S~~~ 474 (609)
+++.+ ++|+||=..+..
T Consensus 71 ~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 71 AFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 55544 689999877654
No 258
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=66.68 E-value=4.8 Score=39.51 Aligned_cols=31 Identities=23% Similarity=0.458 Sum_probs=24.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
-|+|+|||.||+-.|..|.+ .|+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~-----~G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 48999999999999888765 375 46677764
No 259
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=66.54 E-value=7.9 Score=37.49 Aligned_cols=87 Identities=14% Similarity=0.194 Sum_probs=55.0
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
..+|+|.|| |-.|..+++.|++ .|. +++++++. ...| +. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 7777777776653 252 46666542 1111 21 11357778886
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRT-----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+++|++|=+.+..+. .|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 689999988876531 2345677777666667888654
No 260
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=66.23 E-value=5.2 Score=38.22 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|+|+|||.||+..|..+.. .|. ++.++|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSAR-----YML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHH-----CCC-------cEEEEecc
Confidence 4689999999999999988765 253 58999997
No 261
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=66.01 E-value=17 Score=36.13 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=25.6
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+| +|..|..+|..+.. .|. +++++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-----~G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-----SGY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-----TTC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-----CCC-------eEEEEECC
Confidence 5899999 99999999988864 353 68888763
No 262
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=66.00 E-value=5.2 Score=38.96 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+|+|+|||.||+..|..+.. .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999987754 35 3689999863
No 263
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.87 E-value=5.4 Score=38.38 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|||+|||.||+..|..+.. .| .++.++|+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGM-----RQ-------ASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEEcC
Confidence 3589999999999999987764 35 368899985
No 264
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=65.86 E-value=5.4 Score=40.13 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=27.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+++..+|+|+|||.||+..|..+.+ .|+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQ-----NGW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecCCC
Confidence 3456799999999999999888765 363 6888887543
No 265
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=65.49 E-value=4.4 Score=45.98 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=31.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 410 ~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d 444 (805)
T 2nvu_B 410 DTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 444 (805)
T ss_dssp HTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCC
Confidence 688999999999999999988864 86 799999986
No 266
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=65.43 E-value=4.1 Score=42.30 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+||||+|||.||+..|..|... +- .-+|.|+|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999988653 21 1367788765
No 267
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=65.42 E-value=11 Score=36.10 Aligned_cols=97 Identities=14% Similarity=0.065 Sum_probs=57.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhcc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 462 (609)
||+|.|| |-.|..+++.+.+. .| .+++.++++. ++...+.+....+.+ +..+..+|.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~----~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNV----EKVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSG----GGSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCH----HHHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88888887775431 24 4677776642 111112111112221 22223468888885
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGRT------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.|++|=+.+.... -++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7999988765421 2467888888777677888543
No 268
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=65.31 E-value=4.4 Score=38.85 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=24.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+.. .| ..++++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-----~g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-----TP-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-----SS-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHh-----CC-------CeEEEECCC
Confidence 489999999999999887753 24 467888763
No 269
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=64.72 E-value=9.6 Score=35.38 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=39.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc-
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v- 462 (609)
+++|.|| |-.|..+|+.+++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6899988 5555555555543 35 3688888741 1 1211 1111111113466667655
Q ss_pred -CCcEEEEccCCCC
Q 007301 463 -KPTILIGTSGQGR 475 (609)
Q Consensus 463 -kPtvLIG~S~~~g 475 (609)
++|+||=+.+...
T Consensus 61 ~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 61 GVLDGLVCCAGVGV 74 (255)
T ss_dssp TCCSEEEECCCCCT
T ss_pred CCccEEEECCCCCC
Confidence 8999998877543
No 270
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=64.69 E-value=14 Score=33.39 Aligned_cols=91 Identities=9% Similarity=0.135 Sum_probs=53.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh--cchhcc-ccCCCCCHHHHHh
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF--KKPWAH-EHEPVKELVDAVN 460 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~--k~~fA~-~~~~~~~L~e~V~ 460 (609)
||+|.|| |-.|..+++.+++ .| .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-----RG-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHh-----CC-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 7778777777764 25 3688887641 111111 111111 1111112 6676
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHccCCCcEEEecC
Q 007301 461 AIKPTILIGTSGQGRT-------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~-------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
. +|++|=+.+.... .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988776432 1367888888765667777654
No 271
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.52 E-value=6.2 Score=40.68 Aligned_cols=36 Identities=28% Similarity=0.437 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
.-||||+|||.||+..|..|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999881 123 579999886443
No 272
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=64.20 E-value=6 Score=42.49 Aligned_cols=75 Identities=19% Similarity=0.169 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCCCHHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVD 457 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e 457 (609)
..|...|++|+|.+.-..++++.+.+ .|+. -+.++-. ...+.+... +...- ..+...|++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~------vv~~~~~------~~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAH------TVAAVVP------ARAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCE------EEEEEES------SCCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCE------EEEEEEC------CCChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778999999999999999998843 4872 2222211 111111111 00000 011234778
Q ss_pred HHhccCCcEEEEccC
Q 007301 458 AVNAIKPTILIGTSG 472 (609)
Q Consensus 458 ~V~~vkPtvLIG~S~ 472 (609)
.++..+||.+||-|-
T Consensus 370 ~i~~~~pDllig~~~ 384 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH 384 (458)
T ss_dssp HHHHHTCSEEEECTT
T ss_pred HHHhcCCCEEEEChh
Confidence 899999999999653
No 273
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=64.10 E-value=3.2 Score=42.35 Aligned_cols=97 Identities=15% Similarity=0.156 Sum_probs=52.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.....||.|+|+|..|...++.+.. +..|. +-+.++|.+ .++ .....+.|--......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~---~~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLAN---TVSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH---TCTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHh---hCCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 3445799999999988766555432 11121 224466753 111 2222222210112247899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+.-++|+++ ++++. .+..++++...+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 4556665554432 356654
No 274
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=64.01 E-value=9.6 Score=39.19 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
.+|||+|||.||+..|..|.+ .|. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-----~g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-----EGF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc-----cCc-----CCeEEEEECCCCC
Confidence 489999999999999988865 364 2469999886443
No 275
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=63.93 E-value=7.3 Score=36.93 Aligned_cols=81 Identities=14% Similarity=0.143 Sum_probs=44.4
Q ss_pred CCCCCCceEEEeCcc---hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc------cc
Q 007301 378 GGSLADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA------HE 448 (609)
Q Consensus 378 g~~L~d~rivf~GAG---sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA------~~ 448 (609)
..++++.++||.||+ -.|..+|+.+++ .| -+++++|++. ...+.+....+.+. -|
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~-----~G-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 72 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKR-----EG-------AELAFTYVGD----RFKDRITEFAAEFGSELVFPCD 72 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHH-----TT-------CEEEEEESSG----GGHHHHHHHHHHTTCCCEEECC
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHH-----cC-------CCEEEEecch----hhHHHHHHHHHHcCCcEEEECC
Confidence 356889999999984 345556665543 36 3688888752 10111211111111 11
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 449 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.....++.++++.+ ++|+||=..+..
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFA 103 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 12223455556555 789999777654
No 276
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=63.91 E-value=6.1 Score=41.10 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=30.9
Q ss_pred HhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 376 FLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 376 ~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+.++.-+..+|+|+|||.||+..|..|.+ .| .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~-----~g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQK-----AG-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeccCC
Confidence 34444456799999999999999988765 25 36778877643
No 277
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=63.76 E-value=6.7 Score=34.95 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+++|+|+|.+|+-.|..+... | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999998887652 5 478899875
No 278
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=63.58 E-value=4.6 Score=39.32 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=24.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
||.|+|+|..|..+|..+... |. +++++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-----GY-------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 799999999999999988643 53 57888763
No 279
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=63.10 E-value=8.5 Score=39.53 Aligned_cols=79 Identities=15% Similarity=0.226 Sum_probs=52.4
Q ss_pred HHHHHHHHHhcCCCceeeeecCCCC-------cHHHHHHHHcCCCeeeecCCcchHHHHHHHHHHHHHHhCCCCCCceEE
Q 007301 315 HEFMTAVKQNYGERILIQFEDFANH-------NAFDLLEKYGTTHLVFNDDIQGTASVVLAGLISAMKFLGGSLADQRFL 387 (609)
Q Consensus 315 dEfv~Av~~~fGp~~lIqfEDf~~~-------nAf~lL~ryr~~~~~FNDDiQGTaaV~LAgll~Alr~~g~~L~d~riv 387 (609)
-+.+++.-+.|....+|+ |++.. ..+++..+|.-.+++.+-|-+|+..-. .+
T Consensus 94 ~~V~eaaL~~~~Ga~iIN--dIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~---------------~~---- 152 (300)
T 3k13_A 94 WEVIEAGLKCLQGKSIVN--SISLKEGEEVFLEHARIIKQYGAATVVMAFDEKGQADTA---------------AR---- 152 (300)
T ss_dssp HHHHHHHHHHCSSCCEEE--EECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSH---------------HH----
T ss_pred HHHHHHHHHhcCCCCEEE--eCCcccCChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCH---------------HH----
Confidence 346666666653345665 66654 567899999999999998778875320 00
Q ss_pred EeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 388 FLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 388 f~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
-+-+++.+...++.+.|++ +++|| +|.
T Consensus 153 -------~~~i~~r~~~~~~~~~Gi~----~~~Ii-lDP 179 (300)
T 3k13_A 153 -------KIEVCERAYRLLVDKVGFN----PHDII-FDP 179 (300)
T ss_dssp -------HHHHHHHHHHHHHHHTCCC----GGGEE-EEC
T ss_pred -------HHHHHHHHHHHHHHHcCCC----HHHEE-EeC
Confidence 1257888888764457995 56776 676
No 280
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=62.88 E-value=7.3 Score=33.62 Aligned_cols=34 Identities=24% Similarity=0.509 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|+|..|..+|+.+.. .| .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~-----~g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTA-----AG-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEECC
Confidence 34689999999999999988865 25 368888874
No 281
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=62.87 E-value=5.9 Score=40.59 Aligned_cols=37 Identities=14% Similarity=0.320 Sum_probs=29.0
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
...+|||+|||.||+..|..|.+ .|.+ .+|.++|+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-----~g~~-----~~V~lie~~~ 44 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-----NGFE-----GRVLVIGREP 44 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTCC-----SCEEEEESSS
T ss_pred CCCcEEEECChHHHHHHHHHHHc-----cCcC-----CCEEEEecCC
Confidence 35689999999999999998865 3642 3688888854
No 282
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=62.84 E-value=4.9 Score=38.79 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|+|+|||.||+..|..+... |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999888653 63 58888883
No 283
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=62.75 E-value=5.2 Score=38.63 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=23.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999887742 42 47777763
No 284
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=62.66 E-value=8.7 Score=36.93 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=57.6
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
.+|+|.|| |-.|..+++.|++.. .| .+++.+|++. ... .+.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNT-DVVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSC-HHHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----ccc-cccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888888887776520 12 4688877641 110 0111 111111 22222467788887
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHccCCCcEEEec
Q 007301 462 IKPTILIGTSGQGRT---------------FTKEVVEAMASLNEKPIIFSL 497 (609)
Q Consensus 462 vkPtvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaL 497 (609)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 789999988875421 134567777766556788743
No 285
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=62.56 E-value=6.9 Score=38.14 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+..|+|+|||.+|+.+|-.+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~-----~G-------~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAA-----GG-------HEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4589999999999999988865 36 368999987
No 286
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=62.48 E-value=11 Score=36.51 Aligned_cols=78 Identities=12% Similarity=0.133 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh-------ccccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AHEHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-------A~~~~~ 451 (609)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++ . +.+....+.+ .-|...
T Consensus 7 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~Dv~~ 68 (271)
T 3tzq_B 7 AELENKVAIITGACG---GIGLETSRVLAR-AG-------ARVVLADLP----E---TDLAGAAASVGRGAVHHVVDLTN 68 (271)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECT----T---SCHHHHHHHHCTTCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEcCC----H---HHHHHHHHHhCCCeEEEECCCCC
Confidence 367889999999853 444445555544 36 368888874 1 1222221111 112122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ +.|+||=..+..
T Consensus 69 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 69 EVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666654 799999877654
No 287
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=62.47 E-value=19 Score=35.05 Aligned_cols=97 Identities=20% Similarity=0.174 Sum_probs=54.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhc
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNA 461 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~ 461 (609)
.||+|.|| |-.|..+++.+++ .| .+++.+|++. +..+.+...+..+.. +..+..++.++++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRA-----AG-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG 77 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT
T ss_pred CEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC
Confidence 38999996 8888888777764 25 3688887742 111112211111221 22222457777774
Q ss_pred cCCcEEEEccCCCCCC--------------CHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRTF--------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+.+..+.. +..+++++.+..-+.+||.=|
T Consensus 78 --~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 --LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp --CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred --CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 99999887754311 346777777666577888544
No 288
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=62.44 E-value=10 Score=36.21 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=23.5
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGAR---GLGAEAARQAVA-AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 46788999999843 344444444444 36 358888764
No 289
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=62.30 E-value=9.9 Score=37.14 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=58.7
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc----------hhcc-ccC
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK----------PWAH-EHE 450 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~----------~fA~-~~~ 450 (609)
..+|+|.|| |-.|..+++.|++ .| -+++++|+.. . ......+ .+.. +..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~~~~~Dl~ 65 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLA-----HG-------YDVVIADNLV----N---SKREAIARIEKITGKTPAFHETDVS 65 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS----S---SCTHHHHHHHHHHSCCCEEECCCTT
T ss_pred CcEEEEecCCcHHHHHHHHHHHH-----CC-------CcEEEEecCC----c---chHHHHHHHHhhcCCCceEEEeecC
Confidence 468999996 6666666666654 36 3688887641 1 1111111 1111 112
Q ss_pred CCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 451 PVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 451 ~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+..++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 66 d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 22457788887789999988775421 1446788888777778998644
No 290
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=62.30 E-value=8.5 Score=38.81 Aligned_cols=35 Identities=31% Similarity=0.508 Sum_probs=27.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCCC
Confidence 3589999999999999987754 364 6889998743
No 291
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=62.25 E-value=6.7 Score=38.18 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR-----AQ-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----cC-------CcEEEEeCC
Confidence 4689999999999999987764 25 368999987
No 292
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=61.91 E-value=6.2 Score=40.20 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+|||+|||.||+..|..|.+..- .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999998876211 13 4678887654
No 293
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=61.65 E-value=8.1 Score=39.17 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=26.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|||.||+..|-.|.. .|+ ++.++|+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-----AGV-------DVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEecC
Confidence 45789999999999999988765 364 56777765
No 294
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=61.65 E-value=12 Score=35.21 Aligned_cols=101 Identities=19% Similarity=0.174 Sum_probs=57.6
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 458 (609)
..-.+|+|.|| |-.|..+++.|++ .|- -++++++++. ++...+......+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~-----~G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLAD-----KQT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTT-----CTT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHh-----CCC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 6677777666653 241 3677777641 111111111111111 22223467788
Q ss_pred HhccCCcEEEEccCCCCC--CCHHHHHHHHccCCCcEEEecC
Q 007301 459 VNAIKPTILIGTSGQGRT--FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 498 (609)
++. .|++|=..+.... -++.++++|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 885 7999966554332 2567889998776667888655
No 295
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.37 E-value=7.3 Score=37.13 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=25.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEE-Eccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWL-VDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~l-vDs~ 427 (609)
..+|||+|||.||+..|..+... |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988653 53 4566 8873
No 296
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=61.35 E-value=6.9 Score=39.71 Aligned_cols=36 Identities=19% Similarity=0.470 Sum_probs=28.4
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+.+|+|+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-----~G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-----NGI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-----TTC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 345799999999999999887754 364 688888763
No 297
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=61.27 E-value=9.6 Score=36.28 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=23.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++++++|.||+. ||...++..+.+ .|. +++++|++
T Consensus 1 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 1 TLKGKTALVTGSTS---GIGLGIAQVLAR-AGA-------NIVLNGFG 37 (255)
T ss_dssp CCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEECSS
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 36778999999842 344444444444 363 58887764
No 298
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=61.16 E-value=7.4 Score=38.55 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=27.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+.+|+|+|||.||+..|..+.. .| .++.++|+..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 35789999999999999887754 35 3688999863
No 299
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=61.09 E-value=7.4 Score=37.40 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+..|..+.+ .|. .++.++|++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR-----GGV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHH-----CCC------CcEEEEcCC
Confidence 379999999999999988764 363 279999985
No 300
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=61.06 E-value=7.6 Score=38.52 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=28.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+..|+|+|||.+|+.+|-.+.+ .| .++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~-----~G-------~~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK-----EN-------KNTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCCCC
Confidence 4589999999999999998875 36 36999998643
No 301
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=61.01 E-value=7.6 Score=39.54 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=26.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+|+|+|||.||+..|-.|.+ .|+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~-----~G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ-----AGI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHh-----CCC------CeEEEEECCC
Confidence 4689999999999999988765 375 2377777653
No 302
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=60.91 E-value=7.6 Score=37.67 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..|+|+|||.+|+..|-.|.+ .|+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~-----~G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA-----AGH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH-----CCC-------cEEEEECCC
Confidence 479999999999999988865 364 588888763
No 303
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=60.83 E-value=7.7 Score=36.99 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=41.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch------hcc-ccCCC
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAH-EHEPV 452 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~-~~~~~ 452 (609)
+|++.++||.||+. ||...++..+.+ .| -+++++|++- +.+....+. +.+ |..+.
T Consensus 3 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~~ 64 (253)
T 1hxh_A 3 RLQGKVALVTGGAS---GVGLEVVKLLLG-EG-------AKVAFSDINE-------AAGQQLAAELGERSMFVRHDVSSE 64 (253)
T ss_dssp TTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEECSCH-------HHHHHHHHHHCTTEEEECCCTTCH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCceEEEEccCCCH
Confidence 57788999999843 444445555544 36 3588887641 112211111 111 11222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007301 453 KELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 453 ~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.++.++++.+ ++|+||=..+..
T Consensus 65 ~~v~~~~~~~~~~~g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 65 ADWTLVMAAVQRRLGTLNVLVNNAGIL 91 (253)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455556554 689999877654
No 304
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=60.82 E-value=7.3 Score=38.74 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+..|+|+|||.+|+.+|-.|.+ .|. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~-----~G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAK-----RGE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCC
Confidence 4689999999999999988865 363 699999874
No 305
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=60.63 E-value=21 Score=32.43 Aligned_cols=50 Identities=14% Similarity=0.223 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++..+.+++....--.++++++.|| |..|..+++++.. .| -+++.+|++
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~-----~G-------~~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-----IG-------ARIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHH-----HT-------CEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHH-----cC-------CEEEEEeCC
Confidence 34444455544344446789999994 8778777766543 26 257777763
No 306
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=60.28 E-value=7.7 Score=39.29 Aligned_cols=36 Identities=14% Similarity=0.204 Sum_probs=27.0
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+..+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999888653 64 577777753
No 307
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=60.12 E-value=9.1 Score=38.43 Aligned_cols=48 Identities=13% Similarity=0.084 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
.++..+.|++..+. ..++|+|+|||..|..++.+... .|. ++++.+|+
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~ 200 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEP 200 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECS
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 34444566644333 88999999998877766655432 363 47888876
No 308
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=60.08 E-value=7.9 Score=39.27 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=25.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+|+|+|||.||+..|..|.+. | .++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G-------~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----G-------KKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----C-------CeEEEEecCC
Confidence 699999999999999988753 6 3688888743
No 309
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=60.04 E-value=25 Score=36.60 Aligned_cols=131 Identities=7% Similarity=0.026 Sum_probs=87.4
Q ss_pred HHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeee--cCCcchHHHHHHHHHHHHHHhC------CCCCCceEEEeCcc
Q 007301 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLG------GSLADQRFLFLGAG 392 (609)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g------~~L~d~rivf~GAG 392 (609)
+-.+| .++++ +--++ +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +++++.||+++|-+
T Consensus 96 vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~va~vGD~ 170 (328)
T 3grf_A 96 VFSRM-VDICT-ARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIKFAYCGDS 170 (328)
T ss_dssp HHTTT-CSEEE-EECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCCEEEESCC
T ss_pred HHHhh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcEEEEeCCC
Confidence 44567 55443 55443 46667777775 689999 66 5566677888887777776 37999999999998
Q ss_pred hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc---c---CCCCCHHHHHhccCCcE
Q 007301 393 EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE---H---EPVKELVDAVNAIKPTI 466 (609)
Q Consensus 393 sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~---~---~~~~~L~e~V~~vkPtv 466 (609)
. + .+|+-++.++.+ .|+ +|.++-.+|+..+-.. .+...-+.+|.. . ....++.|+|+. .||
T Consensus 171 ~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~-~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~--aDv 237 (328)
T 3grf_A 171 M-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIK-EVIDECEEIIAKHGTGGSIKIFHDCKKGCEG--VDV 237 (328)
T ss_dssp S-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCH-HHHHHHHHHHHHHTCCCEEEEESSHHHHHTT--CSE
T ss_pred C-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCH-HHHHHHHHHHhhccCCCeEEEEcCHHHHhcC--CCE
Confidence 5 2 588888888776 474 6899999888631111 121112223321 1 123689999998 999
Q ss_pred EEE
Q 007301 467 LIG 469 (609)
Q Consensus 467 LIG 469 (609)
+.-
T Consensus 238 vyt 240 (328)
T 3grf_A 238 VYT 240 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 310
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=60.04 E-value=7.7 Score=38.50 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=27.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
..|+|+|||.+|+.+|-.+.+ .| .++.++|+...
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~-----~G-------~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK-----QG-------VKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCCCC
Confidence 579999999999999988865 36 36999998654
No 311
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=59.95 E-value=29 Score=33.35 Aligned_cols=76 Identities=11% Similarity=0.024 Sum_probs=42.1
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V 459 (609)
+++++++|.||+. ||...++..+.+ .| -+++++|++- . .+...+..+.. |..+..++.+++
T Consensus 26 ~~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~Dv~d~~~v~~~~ 87 (260)
T 3un1_A 26 NQQKVVVITGASQ---GIGAGLVRAYRD-RN-------YRVVATSRSI----K---PSADPDIHTVAGDISKPETADRIV 87 (260)
T ss_dssp TTCCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---CCSSTTEEEEESCTTSHHHHHHHH
T ss_pred cCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----h---hcccCceEEEEccCCCHHHHHHHH
Confidence 5678999999753 344444454444 36 3688888741 1 12111212221 222223455566
Q ss_pred hcc-----CCcEEEEccCCC
Q 007301 460 NAI-----KPTILIGTSGQG 474 (609)
Q Consensus 460 ~~v-----kPtvLIG~S~~~ 474 (609)
+.+ ++|+||=..+..
T Consensus 88 ~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 88 REGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 654 799999877654
No 312
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=59.87 E-value=20 Score=35.52 Aligned_cols=108 Identities=21% Similarity=0.238 Sum_probs=57.0
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc---cCCCccCCchh------cchhcc-
Q 007301 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI---VSSRLESLQHF------KKPWAH- 447 (609)
Q Consensus 379 ~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi---~~~R~~~L~~~------k~~fA~- 447 (609)
..++..+|+|.|| |-.|..+++.|++. ..| -+++.+|+..-- ...+.+.+... +..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~---~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQEN---HPK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHH---CTT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhh---CCC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 77777777766541 024 478888874210 00000011111 111111
Q ss_pred ccCCCCCHHHHHhccCCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecC
Q 007301 448 EHEPVKELVDAVNAIKPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 448 ~~~~~~~L~e~V~~vkPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+.....++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111234444 33479999987774431 134577777666655 888655
No 313
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=59.85 E-value=7.1 Score=39.36 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+|+|+|||.||+..|..+.+ .|+ ++.++|+.-
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-----~G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-----QGH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------cEEEEeCCC
Confidence 4689999999999999988765 364 578888753
No 314
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=59.78 E-value=4.9 Score=38.74 Aligned_cols=34 Identities=29% Similarity=0.417 Sum_probs=26.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|||.||+..|..+.+ .|. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-----~g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-----ANL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEccC
Confidence 45689999999999999988764 353 57788853
No 315
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=59.70 E-value=8.1 Score=39.65 Aligned_cols=37 Identities=19% Similarity=0.358 Sum_probs=28.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
..+.+..|||+|||.+|+.+|-.+.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 345667899999999999999888764 4 147899998
No 316
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=59.64 E-value=32 Score=34.55 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=57.3
Q ss_pred CCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHH
Q 007301 382 ADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAV 459 (609)
Q Consensus 382 ~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V 459 (609)
+..+|+|.|| |-.|..+++.|++ .| .+++.+|++- .....+......+.. +..+..++.+++
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~ 91 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKH-----EG-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVT 91 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHH-----CC-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHh
Confidence 3468999998 7777777777654 25 3688887741 111111111111211 222223577777
Q ss_pred hccCCcEEEEccCCCCC--C---------------CHHHHHHHHccCCCcEEEecC
Q 007301 460 NAIKPTILIGTSGQGRT--F---------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 498 (609)
+ ++|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 92 ~--~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 92 E--GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--TCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 6 59999988875432 1 345677776666567888544
No 317
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=59.58 E-value=4.6 Score=44.40 Aligned_cols=38 Identities=18% Similarity=0.333 Sum_probs=33.1
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 356789999999999999999999875 86 899999976
No 318
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=59.57 E-value=9.2 Score=38.95 Aligned_cols=88 Identities=13% Similarity=0.143 Sum_probs=52.3
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-cCCCCCHHHHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-HEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~~~~~~L~e~V 459 (609)
|+..+|.|+|+|..|..+|..+... |. +++++|+.. .+ .+ ..++. .-...++.|++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~-----G~-------~V~~~~~~~----~~--~~-----~~a~~~G~~~~~~~e~~ 70 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDS-----GV-------DVTVGLRSG----SA--TV-----AKAEAHGLKVADVKTAV 70 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECCTT----CH--HH-----HHHHHTTCEEECHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHC-----cC-------EEEEEECCh----HH--HH-----HHHHHCCCEEccHHHHH
Confidence 3456899999999999999887653 63 577777642 11 01 11111 00112788888
Q ss_pred hccCCcEEEEccCCCCCCCHHHHH-HHHccC-CCcEEE
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVE-AMASLN-EKPIIF 495 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~-~Ma~~~-erPIIF 495 (609)
+. +|++| ++.+... .+++++ .+..+. +..+|.
T Consensus 71 ~~--aDvVi-lavp~~~-~~~v~~~~i~~~l~~~~ivi 104 (338)
T 1np3_A 71 AA--ADVVM-ILTPDEF-QGRLYKEEIEPNLKKGATLA 104 (338)
T ss_dssp HT--CSEEE-ECSCHHH-HHHHHHHHTGGGCCTTCEEE
T ss_pred hc--CCEEE-EeCCcHH-HHHHHHHHHHhhCCCCCEEE
Confidence 75 88887 4444433 378887 665433 334444
No 319
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=59.33 E-value=9.1 Score=40.64 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|+|.||+..|..|... |. ++.++|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecc
Confidence 457899999999999999998753 63 58899875
No 320
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=59.22 E-value=11 Score=37.75 Aligned_cols=31 Identities=29% Similarity=0.526 Sum_probs=24.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
+||-|+|-|..|.++|..|++. |. +++.+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr 36 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNR 36 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeC
Confidence 5899999999999999999764 64 5777776
No 321
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=59.18 E-value=15 Score=37.00 Aligned_cols=103 Identities=14% Similarity=0.190 Sum_probs=57.6
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc-hhcchhcc-ccCCCCCHH
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ-HFKKPWAH-EHEPVKELV 456 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~-~~k~~fA~-~~~~~~~L~ 456 (609)
+++..+|+|.|| |-.|..+++.|++ .|. .+++.+|+.. ....+.+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~---~~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLE-----LGV------NQVHVVDNLL---SAEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHH-----TTC------SEEEEECCCT---TCCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHH-----cCC------ceEEEEECCC---CCchhhccCCCceEEEECCCCCHHHHH
Confidence 356679999997 7778777777754 251 4688887641 11001121 11111111 111123455
Q ss_pred HHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHcc-CCCcEEEecC
Q 007301 457 DAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASL-NEKPIIFSLS 498 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 498 (609)
++++ ++|++|=+.+.... -+..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 5565 69999988875431 145567777665 4567887544
No 322
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=59.15 E-value=15 Score=33.91 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=56.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDA 458 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~ 458 (609)
+...+|+|.|| |-.|..+++.+++ .| ...++++++++. ++.+.+.. ...+.. +..+..++.++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~-----~~-----~g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~ 66 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKE-----GS-----DKFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPA 66 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHH-----TT-----TTCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHh-----cC-----CCcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHH
Confidence 34578999996 6667666666654 22 014678777641 11011110 111111 22222457777
Q ss_pred HhccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHccCCCcEEEecC
Q 007301 459 VNAIKPTILIGTSGQGRT----------------F-------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 498 (609)
++. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 67 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 67 FQG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp HTT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HcC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 775 8999977764321 1 467788887766667888543
No 323
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=59.11 E-value=33 Score=36.72 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..||.|+|+|.-|+.+|..+++. | .+++++|.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-----G-------~~V~~~D~~ 40 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-----G-------HEVVCVDKD 40 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46999999999999999988764 5 367778864
No 324
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=59.10 E-value=6.4 Score=39.07 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+-.|+|+|||.||+..|-.+.+ .|+ ++.++|+.-
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~-----~G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAK-----YGL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCCC
Confidence 4579999999999999988765 364 577888764
No 325
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=59.09 E-value=51 Score=33.92 Aligned_cols=133 Identities=13% Similarity=0.155 Sum_probs=85.2
Q ss_pred HHHHHHHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeee--cCCcchHHHHHHHHHHHHHHhCCCCC-CceEEEeCcc
Q 007301 316 EFMTAVKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLA-DQRFLFLGAG 392 (609)
Q Consensus 316 Efv~Av~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~L~-d~rivf~GAG 392 (609)
..+. +-.+| .++++ +--++ +.+.+.|.+|- ++||.| || .---.=+||=++.-.+.. ++++ +.||+++|-|
T Consensus 83 DTar-vls~~-~D~iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vGD~ 155 (307)
T 3tpf_A 83 DTAR-VIGAM-VDFVM-MRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIGDS 155 (307)
T ss_dssp HHHH-HHHHH-SSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEESCS
T ss_pred HHHH-HHHHh-CCEEE-EecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEcCC
Confidence 3444 34456 55443 44443 46677777776 689998 65 455566777777655544 5799 9999999997
Q ss_pred hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcccc----CCCCCHHHHHhccCCcEEE
Q 007301 393 EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEH----EPVKELVDAVNAIKPTILI 468 (609)
Q Consensus 393 sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~----~~~~~L~e~V~~vkPtvLI 468 (609)
. -+|+-++.++.+ .|+ +|.++-.+|+.-.. .+-...+.+|+.. ....++.|+|+. .||+.
T Consensus 156 ~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy 219 (307)
T 3tpf_A 156 N---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP---EIWEFAMKQALISGAKISLGYDKFEALKD--KDVVI 219 (307)
T ss_dssp S---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHTCEEEEESCHHHHHTT--CSEEE
T ss_pred C---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH---HHHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCEEE
Confidence 3 488888888776 474 68888888774321 1111112233221 123689999998 99998
Q ss_pred Ecc
Q 007301 469 GTS 471 (609)
Q Consensus 469 G~S 471 (609)
-..
T Consensus 220 t~~ 222 (307)
T 3tpf_A 220 TDT 222 (307)
T ss_dssp ECC
T ss_pred ecC
Confidence 655
No 326
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=59.06 E-value=8.7 Score=36.46 Aligned_cols=78 Identities=28% Similarity=0.346 Sum_probs=43.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh-------ccccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-------AHEHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-------A~~~~~ 451 (609)
.++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+....+.+ .-+..+
T Consensus 5 m~l~~k~vlITGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 66 (261)
T 3n74_A 5 MSLEGKVALITGAGS---GFGEGMAKRFAK-GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADISK 66 (261)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTTS
T ss_pred ccCCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCCC
Confidence 467889999999864 333444444444 36 3688888641 1122221111 112222
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 67 EADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23566666655 899999877654
No 327
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=59.01 E-value=22 Score=33.30 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=25.0
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..|++++++|.||++ ||...|+..+.+ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAAR---GIGAAAARAYAA-HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEecC
Confidence 357889999999853 444445555544 36 368888874
No 328
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=59.00 E-value=8.8 Score=36.40 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=54.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhcc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 462 (609)
||+|.|| |-.|..+++.+++. ..| -+++.+|++. ++.+.+......+.. +..+..++.++++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5889998 77777777766531 003 3677777641 111111111111111 21222457777775
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGR----TFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+++... ..+..++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 799998876421 24678899988766677887543
No 329
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=58.92 E-value=8 Score=37.49 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR-----SG-------FSVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHh-----CC-------CcEEEEeCC
Confidence 4689999999999999988765 35 368899984
No 330
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=58.87 E-value=7.5 Score=37.10 Aligned_cols=83 Identities=22% Similarity=0.404 Sum_probs=54.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
||+|.|| |-.|..+++.|++ .| .+++.+|+. ..| +. +...+.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-----EE-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-----TT-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHh-----CC-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhcC
Confidence 8999997 8788777776653 24 468888871 111 21 1135778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 464 PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 464 PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+.+.... .+..+++++.+..-| +||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAK-LVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCE-EEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCe-EEEEch
Confidence 9999988776531 134577777766554 887544
No 331
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=58.73 E-value=7.7 Score=38.17 Aligned_cols=101 Identities=11% Similarity=0.161 Sum_probs=60.2
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh----------cchhcc-c
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-E 448 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~----------k~~fA~-~ 448 (609)
+...+|+|.|| |-.|..+++.|++ .| .+++.+|+..- .....+... ...+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLK-----LN-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45689999996 8888888777765 25 36888877421 110111111 111111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 449 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 449 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122245777777 59999988875321 1344788888777778998643
No 332
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=58.66 E-value=10 Score=38.97 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=29.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46899999999999999988764 53 1368999987543
No 333
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=58.63 E-value=8 Score=40.45 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
||||+|||.||+-.|..+.+. |. .-+|.|+|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999877543 53 23688898754
No 334
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=58.60 E-value=8.5 Score=40.17 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|||+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE-----QG-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4689999999999999977754 25 479999986
No 335
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=58.52 E-value=29 Score=32.91 Aligned_cols=77 Identities=13% Similarity=0.203 Sum_probs=41.0
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch------hcc-ccCCC
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAH-EHEPV 452 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~-~~~~~ 452 (609)
++++.++||.||++ ||..-++..+.+ .| -+++++|++- . .+....+. +.. |....
T Consensus 4 ~l~~k~~lVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~~~ 65 (257)
T 3tpc_A 4 QLKSRVFIVTGASS---GLGAAVTRMLAQ-EG-------ATVLGLDLKP----P---AGEEPAAELGAAVRFRNADVTNE 65 (257)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESSC----C---------------CEEEECCTTCH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----H---HHHHHHHHhCCceEEEEccCCCH
Confidence 57888999999853 444445555544 36 3588887641 1 12111111 111 22222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007301 453 KELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 453 ~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.++.++++.+ +.|+||=..+..
T Consensus 66 ~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 66 ADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455666654 799999776644
No 336
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=58.47 E-value=14 Score=36.59 Aligned_cols=101 Identities=12% Similarity=0.175 Sum_probs=58.1
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh----------cchhcc-c
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-E 448 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~----------k~~fA~-~ 448 (609)
++..+|+|.|| |-.|..+++.|++ .| .+++.+|+.- ....+.+... +..+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLK-----LD-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45678999998 7777777777664 25 3688887641 1100112111 111111 1
Q ss_pred cCCCCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 449 HEPVKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 449 ~~~~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 122235777777 59999998876431 1345677776665566887543
No 337
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=58.39 E-value=15 Score=35.63 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=41.5
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHH
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELV 456 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~ 456 (609)
+.++.++++||.||++ ||...++..+.+ .|. +++++|++- ++.+.+...+..+.. |..+..++.
T Consensus 11 ~~~~~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v~ 75 (266)
T 3p19_A 11 GRGSMKKLVVITGASS---GIGEAIARRFSE-EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTFD 75 (266)
T ss_dssp ----CCCEEEEESTTS---HHHHHHHHHHHH-TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHHH
T ss_pred CCCCCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHHH
Confidence 3457788999999853 444555555554 363 688887641 111111111111111 222223455
Q ss_pred HHHhcc-----CCcEEEEccCCC
Q 007301 457 DAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 457 e~V~~v-----kPtvLIG~S~~~ 474 (609)
++++.+ ++|+||=..+..
T Consensus 76 ~~~~~~~~~~g~iD~lvnnAg~~ 98 (266)
T 3p19_A 76 TAITRAEKIYGPADAIVNNAGMM 98 (266)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCC
T ss_pred HHHHHHHHHCCCCCEEEECCCcC
Confidence 566544 789999777653
No 338
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=57.99 E-value=9.1 Score=39.09 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=29.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
+..|||+|||.+|+..|-.|.+ .|. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~-----~G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR-----RGY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH-----TTC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----cCC------CcEEEEeCCCCC
Confidence 4579999999999999988765 364 379999987553
No 339
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=57.99 E-value=9.4 Score=35.71 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999843 455556665554 36 358888764
No 340
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=57.74 E-value=16 Score=36.63 Aligned_cols=86 Identities=19% Similarity=0.085 Sum_probs=54.7
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
+.||+++|+ |..|.-+++.+.+ .|. +-++.+|.+.- + .+ .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~-----~g~------~~V~~V~p~~~---g-~~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIA-----YGT------KMVGGVTPGKG---G-TT-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHH-----HTC------EEEEEECTTCT---T-CE-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHH-----CCC------eEEEEeCCCcc---c-ce-------eC--CeeccCCHHHHhhc
Confidence 468999999 9888776666543 253 35677877411 0 01 00 01113679999885
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEE
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPII 494 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 494 (609)
.+||+.|=+ +++ .+..++++...+..-+.+|
T Consensus 63 ~~~D~viI~-tP~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIY-VPA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEEC-CCG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEe-cCH-HHHHHHHHHHHHCCCCEEE
Confidence 569988844 333 5889999988877666533
No 341
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=57.72 E-value=5.6 Score=39.29 Aligned_cols=91 Identities=5% Similarity=0.107 Sum_probs=49.0
Q ss_pred CCCceEEEeCcchHHHH-HHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 381 LADQRFLFLGAGEAGTG-IAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GAGsAg~G-IA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
++..||.|+|+|..|.. .++.+.. ..+. +-+.++|++ . +......+.|- .+...++.|++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~~--~~~~~~~~~ll 64 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTK----SERF------EFVGAFTPN----K---VKREKICSDYR--IMPFDSIESLA 64 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTS----CSSS------EEEEEECSC----H---HHHHHHHHHHT--CCBCSCHHHHH
T ss_pred cccCcEEEEecCHHHHHHHHHHHHh----CCCe------EEEEEECCC----H---HHHHHHHHHcC--CCCcCCHHHHH
Confidence 34579999999988865 5554422 1121 223366652 1 11222222221 12257899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+ ++|+++ ++++.. ...++++...+ ..++++.
T Consensus 65 ~--~~D~V~-i~tp~~-~h~~~~~~al~-~gk~vl~ 95 (308)
T 3uuw_A 65 K--KCDCIF-LHSSTE-THYEIIKILLN-LGVHVYV 95 (308)
T ss_dssp T--TCSEEE-ECCCGG-GHHHHHHHHHH-TTCEEEE
T ss_pred h--cCCEEE-EeCCcH-hHHHHHHHHHH-CCCcEEE
Confidence 8 799988 555554 45555544332 2355554
No 342
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=57.66 E-value=9.5 Score=40.74 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||.|+|+|..|..+|..+... | .+++++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999988763 5 367788864
No 343
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=57.62 E-value=9.8 Score=37.94 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=28.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+..|+|+|||.+|+.+|-.+.+. .|. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~----~G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKN----HGI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HCC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHh----cCC------CcEEEEeCCC
Confidence 46899999999999999888761 151 4799999875
No 344
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=57.62 E-value=8.3 Score=38.09 Aligned_cols=35 Identities=11% Similarity=0.247 Sum_probs=28.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
..|+|+|||.+|+.+|-.|.+. | .++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G-------~~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----G-------LNVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----T-------CCEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCCCC
Confidence 4799999999999999888653 6 368999987543
No 345
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=57.61 E-value=10 Score=38.07 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+|+|+|||.||+..|-.|... |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999887653 64 577888754
No 346
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=57.57 E-value=5.8 Score=38.32 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=58.2
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCc--cCCchhcchhcc-ccCCCCCHHHH
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRL--ESLQHFKKPWAH-EHEPVKELVDA 458 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~--~~L~~~k~~fA~-~~~~~~~L~e~ 458 (609)
..+|+|.|| |-.|..+++.|++. | ..+++.++++. ++. ..+......+.+ +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 468999998 88888888877653 4 13677777641 110 001111111111 22223467788
Q ss_pred HhccCCcEEEEccCCCCC--------CCHHHHHHHHccCCCcEEEecCC
Q 007301 459 VNAIKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLSN 499 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 499 (609)
++. +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 876 8999987653211 2556788887766677888 664
No 347
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=57.42 E-value=12 Score=35.86 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=54.6
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
-...+|++.|| |-.|..+++.|++ .| .+++.+|++ ..| +. ...++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHHH
Confidence 34578999987 6777777766653 25 367877764 111 21 113577778
Q ss_pred hccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 460 NAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76789999988875431 03566777766554 7888654
No 348
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.37 E-value=8.4 Score=37.79 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=29.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999998888764 5 368888874
No 349
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=57.24 E-value=8.7 Score=40.42 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ-----LG-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 4689999999999999988765 36 4689999754
No 350
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=56.99 E-value=9.8 Score=41.36 Aligned_cols=35 Identities=26% Similarity=0.297 Sum_probs=28.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999998865 364 589999864
No 351
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=56.81 E-value=6.7 Score=40.45 Aligned_cols=109 Identities=15% Similarity=0.157 Sum_probs=50.4
Q ss_pred HHHHHHhCCCCCC-ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-
Q 007301 371 ISAMKFLGGSLAD-QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE- 448 (609)
Q Consensus 371 l~Alr~~g~~L~d-~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~- 448 (609)
|+.-.+....+++ .||-|+|+|..|..-++.+...-.....+ .+-.+=+-++|.+ . +... .+|..
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~---~~a~----~~a~~~ 79 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----Q---AMAE----RHAAKL 79 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----H---HHHH----HHHHHH
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----H---HHHH----HHHHHc
Confidence 4444455556666 69999999988765555554321110001 0001223355652 1 1122 33332
Q ss_pred -cC-CCCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHc----cCCCcE
Q 007301 449 -HE-PVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMAS----LNEKPI 493 (609)
Q Consensus 449 -~~-~~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~----~~erPI 493 (609)
.+ -..++.|.++.-++|+++ ++++...=-+-++++|.+ .+|+|+
T Consensus 80 ~~~~~y~d~~~ll~~~~vD~V~-I~tp~~~H~~~~~~al~aGkhVl~EKP~ 129 (412)
T 4gqa_A 80 GAEKAYGDWRELVNDPQVDVVD-ITSPNHLHYTMAMAAIAAGKHVYCEKPL 129 (412)
T ss_dssp TCSEEESSHHHHHHCTTCCEEE-ECSCGGGHHHHHHHHHHTTCEEEEESCS
T ss_pred CCCeEECCHHHHhcCCCCCEEE-ECCCcHHHHHHHHHHHHcCCCeEeecCC
Confidence 11 236899999988899877 666553333444445553 345554
No 352
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=56.69 E-value=8.4 Score=39.96 Aligned_cols=36 Identities=17% Similarity=0.299 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|||.||+..|..+.+ .|.. .++.++|+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-----~G~~-----~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-----EKAF-----DQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-----TTCC-----SEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHh-----cCCC-----CCeEEEecC
Confidence 35689999999999999988864 3641 378899876
No 353
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=56.65 E-value=10 Score=35.84 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+-.|..+.+ .| .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~-----~g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQ-----KG-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 4689999999999999988765 35 468888875
No 354
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=56.56 E-value=7.2 Score=38.89 Aligned_cols=89 Identities=18% Similarity=0.250 Sum_probs=49.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|+|..|...++.+... .+. +-+.++|.+ . +......+.|- .+ ..++.|+++.-+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~~~~~~--~~-~~~~~~~l~~~~ 63 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN----ADA------RLVAVADAF----P---AAAEAIAGAYG--CE-VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC----TTE------EEEEEECSS----H---HHHHHHHHHTT--CE-ECCHHHHHHCTT
T ss_pred eEEEEECCCHHHHHHHHHHhhC----CCc------EEEEEECCC----H---HHHHHHHHHhC--CC-cCCHHHHhcCCC
Confidence 5899999999887766655331 121 223356653 1 11222222221 12 678999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+|+++ +++++ ....++++...+. .++|+.
T Consensus 64 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 92 (331)
T 4hkt_A 64 IDAVV-ICTPT-DTHADLIERFARA-GKAIFC 92 (331)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCEEE-EeCCc-hhHHHHHHHHHHc-CCcEEE
Confidence 89887 44444 3455555544332 355554
No 355
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=56.45 E-value=7.9 Score=37.60 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=26.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
...+|+|+|||.||+..|..+.+. |. ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 346899999999999999888652 53 5888887
No 356
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.24 E-value=11 Score=39.16 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~ 38 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKR 38 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCC
Confidence 45799999999999999877653 5 378999986
No 357
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=56.11 E-value=11 Score=37.39 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+..|+|+|||.+|+.+|-.+.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4689999999999999988854 36 4799999764
No 358
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=56.08 E-value=9.8 Score=45.18 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=33.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 24 rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 24 KMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57899999999999999999999986 86 899999986
No 359
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=55.98 E-value=24 Score=35.95 Aligned_cols=104 Identities=18% Similarity=0.251 Sum_probs=57.4
Q ss_pred CCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccC
Q 007301 358 DIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLES 437 (609)
Q Consensus 358 DiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~ 437 (609)
+.++.....++..+.+++..+.+ .+++++|+|||..|...+.+.. + .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLAR-L----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECCC----------
Confidence 34554444566666677655543 4679999999877755444332 2 474 578888763
Q ss_pred Cchhcchhccc-------cCCCCCHHHHHhc---c---CCcEEEEccCCCCCCCHHHHHHHH
Q 007301 438 LQHFKKPWAHE-------HEPVKELVDAVNA---I---KPTILIGTSGQGRTFTKEVVEAMA 486 (609)
Q Consensus 438 L~~~k~~fA~~-------~~~~~~L~e~V~~---v---kPtvLIG~S~~~g~Ft~evv~~Ma 486 (609)
+.+..+++. .....++.+.++. . +.|++|=+++.+ ..-++.++.++
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~ 275 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAK 275 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhc
Confidence 122223321 0112466676664 2 578888876632 12234444443
No 360
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=55.94 E-value=44 Score=31.74 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=42.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
.++++.+++|.||++ ||...++..+.+ .| -+++++|++- ...+.+. ...+.-+. ..++.++
T Consensus 15 ~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~~ 75 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR---GIGRAVADVLSQ-EG-------AEVTICARNE----ELLKRSG--HRYVVCDL--RKDLDLL 75 (249)
T ss_dssp -CCTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH----HHHHHTC--SEEEECCT--TTCHHHH
T ss_pred hccCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHHH
Confidence 468889999999853 344444454444 36 3588888753 0001111 11111111 2356666
Q ss_pred Hhcc-CCcEEEEccCCC
Q 007301 459 VNAI-KPTILIGTSGQG 474 (609)
Q Consensus 459 V~~v-kPtvLIG~S~~~ 474 (609)
++.+ ++|+||=..+..
T Consensus 76 ~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 76 FEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHSCCCSEEEECCCCC
T ss_pred HHHhcCCCEEEECCCCC
Confidence 6666 799999877654
No 361
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=55.87 E-value=5.6 Score=39.93 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=50.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|+|..|...++.+.. ..+. +-+.++|++ . +......+.|- ..-..++.|+++.-+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA----NPDL------ELVVIADPF----I---EGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH----CTTE------EEEEEECSS----H---HHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHh----CCCc------EEEEEECCC----H---HHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 589999999988776665533 1121 223466653 1 11222122221 122468999999777
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+|+++ +++.. ....++++...+. .++|+.
T Consensus 66 ~D~V~-i~tp~-~~h~~~~~~al~~-gk~v~~ 94 (344)
T 3euw_A 66 IDGIV-IGSPT-STHVDLITRAVER-GIPALC 94 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHT-TCCEEE
T ss_pred CCEEE-EeCCc-hhhHHHHHHHHHc-CCcEEE
Confidence 99888 44444 4555555554433 355554
No 362
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=55.80 E-value=5.2 Score=41.16 Aligned_cols=89 Identities=16% Similarity=0.196 Sum_probs=50.0
Q ss_pred ceEEEeCcc-hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 384 QRFLFLGAG-EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 384 ~rivf~GAG-sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
.||.|+|+| .+|...+..+... .++ +-+.++|.+ . +......+.| ..+...++.|+++.-
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~----~~~------~l~av~d~~----~---~~~~~~a~~~--g~~~~~~~~ell~~~ 63 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH----PDA------QIVAACDPN----E---DVRERFGKEY--GIPVFATLAEMMQHV 63 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC----TTE------EEEEEECSC----H---HHHHHHHHHH--TCCEESSHHHHHHHS
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC----CCe------EEEEEEeCC----H---HHHHHHHHHc--CCCeECCHHHHHcCC
Confidence 589999999 8887776665431 221 234456652 1 1122222222 122347899999988
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEE
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPII 494 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPII 494 (609)
++|+++ +++.+. +..++++...+. -++++
T Consensus 64 ~vD~V~-i~tp~~-~H~~~~~~al~a-Gk~Vl 92 (387)
T 3moi_A 64 QMDAVY-IASPHQ-FHCEHVVQASEQ-GLHII 92 (387)
T ss_dssp CCSEEE-ECSCGG-GHHHHHHHHHHT-TCEEE
T ss_pred CCCEEE-EcCCcH-HHHHHHHHHHHC-CCcee
Confidence 899988 555443 445555443322 34555
No 363
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=55.76 E-value=9.7 Score=38.24 Aligned_cols=35 Identities=14% Similarity=0.307 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
..|+|+|||.+|+.+|-.+.+ .|. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~-----~G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE-----RGH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CCC-------eEEEEeCCCCC
Confidence 579999999999999988765 363 68999987554
No 364
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=55.76 E-value=9.5 Score=40.04 Aligned_cols=33 Identities=30% Similarity=0.498 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAA-----FG-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CcEEEEcCC
Confidence 4689999999999999988865 25 479999986
No 365
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=55.74 E-value=8.1 Score=40.53 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=28.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
++.++||+|||.||+..|..+.+ .| .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-----~g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-----LG-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 35689999999999999988854 25 4799999863
No 366
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=55.62 E-value=9.5 Score=35.65 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=51.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh-cchhcc-ccCCCCCHHHH-Hhc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF-KKPWAH-EHEPVKELVDA-VNA 461 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~-k~~fA~-~~~~~~~L~e~-V~~ 461 (609)
||+|+|+|..|..+|+.+... | ..+.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 799999999999999888652 5 468889874 1111111110 011111 11111235444 33
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHc-cCCCcEEEecCC
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMAS-LNEKPIIFSLSN 499 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSN 499 (609)
+++++|-+.... . ....+..+++ .+..+-|++..|
T Consensus 65 -~ad~vi~~~~~d-~-~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD-E-VNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH-H-HHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc-H-HHHHHHHHHHHHcCCCeEEEEEe
Confidence 589998665432 2 2233444443 356666666655
No 367
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=55.48 E-value=9.8 Score=40.10 Aligned_cols=38 Identities=16% Similarity=0.242 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+..|..+.+.. ..|++ ..++.++|+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcC
Confidence 48999999999999999987632 13642 0138888876
No 368
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=55.36 E-value=13 Score=40.91 Aligned_cols=37 Identities=11% Similarity=0.266 Sum_probs=29.9
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+++.+|+|+|||.||+..|-.|.. .|+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar-----~G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHK-----LGH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHc-----CCC-------CEEEEcCCCC
Confidence 567899999999999999887755 363 6899998743
No 369
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=55.26 E-value=13 Score=40.15 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=20.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
++++.++++.|||.+|.++|..+.+ .|. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~-----~G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKE-----KGA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHH-----HCC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 5778899999998666666555543 262 57888763
No 370
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=55.02 E-value=25 Score=34.69 Aligned_cols=102 Identities=15% Similarity=0.140 Sum_probs=58.9
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCch-----hcchhcc-ccCCCC
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQH-----FKKPWAH-EHEPVK 453 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~-----~k~~fA~-~~~~~~ 453 (609)
+++.+|+|.|| |-.|..+++.|++ .| .+++.+|+.. .+.+.+.. .+..+.. +.....
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQT-----MG-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHh-----CC-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 44678999996 7777777777654 25 3688887741 11111110 0111111 212224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccC-CCcEEEecC
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 498 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 498 (609)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788888889999988875321 0234566665544 467888655
No 371
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=54.97 E-value=8 Score=39.91 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhc-CcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETR-KKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr-~~i~lvDs~GL 429 (609)
..+|||+|||.||+..|..+.+. |. +.. -++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~-----g~---~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQER-----AQ---AQGALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHH-----HH---HHCCCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhc-----cc---ccCcccEEEEecCCC
Confidence 34799999999999999988764 31 000 47889988753
No 372
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.82 E-value=13 Score=38.36 Aligned_cols=91 Identities=8% Similarity=0.114 Sum_probs=52.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc-
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 462 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v- 462 (609)
.||.|+|+|..|..+|..+... | .+++++|++- +.+...+. .......++.|+++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~---~G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVD---EGFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHH---TTCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHH---cCCeeeCCHHHHHHhcc
Confidence 5899999999999999888653 5 3688888741 11111110 0011124666766542
Q ss_pred -CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecC
Q 007301 463 -KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 -kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.+|++| ++.+.. -++++++.++...+.-||.=.+
T Consensus 67 ~~aDlVi-lavP~~-~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPMT-AIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCHH-HHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCHH-HHHHHHHHHHccCCCCEEEEcC
Confidence 467666 444332 4667777766554444554443
No 373
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=54.77 E-value=26 Score=34.02 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=57.0
Q ss_pred CCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCc----hhcchhcc-ccCCCC
Q 007301 380 SLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQ----HFKKPWAH-EHEPVK 453 (609)
Q Consensus 380 ~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~----~~k~~fA~-~~~~~~ 453 (609)
+-...||+|.|| |-.|..+++.|++ .| .+++.+|+..- ......+. .....+.. +..+..
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 76 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLE-----KG-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADAC 76 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHH
T ss_pred cccCCeEEEECCCChHHHHHHHHHHH-----CC-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHH
Confidence 345678999987 6677667666654 25 36888876421 00000010 00111111 222224
Q ss_pred CHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccC-CCcEEEecC
Q 007301 454 ELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLN-EKPIIFSLS 498 (609)
Q Consensus 454 ~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 498 (609)
++.++++.+++|++|=+.+.... -+..+++++.+.. .+.+||.=|
T Consensus 77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 67788888899999988775431 1335677776655 367887544
No 374
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=54.76 E-value=11 Score=36.96 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=57.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCC---CccCCchhc------chhcc-ccCCC
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSS---RLESLQHFK------KPWAH-EHEPV 452 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~---R~~~L~~~k------~~fA~-~~~~~ 452 (609)
.+|+|.|| |-.|..+++.|++ .| .+++++|+.---..+ ..+.+...+ ..+.. +....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLE-----AG-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH-----TT-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 58999986 7777777777654 25 368888763110000 000011000 01111 11222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 453 KELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 453 ~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.++.++++..++|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777876679999988775421 1345777877766667888543
No 375
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=54.58 E-value=53 Score=34.37 Aligned_cols=131 Identities=18% Similarity=0.234 Sum_probs=84.7
Q ss_pred HHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeee--cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHH
Q 007301 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGI 398 (609)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GI 398 (609)
+-.+| .++++ +--+. +.+.+.|.+|- ++||.| || .---.=+||=++.-.+..| +|++.||+|+|-+ . -+
T Consensus 121 vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~-~--nv 191 (340)
T 4ep1_A 121 VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDG-N--NV 191 (340)
T ss_dssp HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC-C--HH
T ss_pred HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCC-c--hh
Confidence 34456 55544 44443 46667777775 589998 55 4445667777777666655 5999999999998 2 38
Q ss_pred HHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-c---CCCCCHHHHHhccCCcEEEEccCC
Q 007301 399 AELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTSGQ 473 (609)
Q Consensus 399 A~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S~~ 473 (609)
|+-++.++.+ .|+ +|.++-.+|+.-.. .+-..-+.+|+. . ....++.|||+. .||+.-..=+
T Consensus 192 a~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~---~~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~~w~ 257 (340)
T 4ep1_A 192 CHSLLLASAK-VGM-------HMTVATPVGYRPNE---EIVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTDVWM 257 (340)
T ss_dssp HHHHHHHHHH-HTC-------EEEEECCTTCCCCH---HHHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEECCC-
T ss_pred HHHHHHHHHH-cCC-------EEEEECCcccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEecCcc
Confidence 8888888776 475 68888888774321 111111223322 1 123689999998 9999876533
No 376
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=54.49 E-value=21 Score=32.81 Aligned_cols=94 Identities=16% Similarity=0.267 Sum_probs=55.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCC-CCCHHHHHhc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEP-VKELVDAVNA 461 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~-~~~L~e~V~~ 461 (609)
||+|.|| |-.|..+++.+++ .| -++++++++. ++...+ .+..+.. +..+ ..++.++++.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKV----EQVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSG----GGSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCc----cchhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 7899994 6666666665543 35 4688888752 111111 1111111 2222 2356666764
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRT--------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999988765421 1567889988777677888555
No 377
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=54.32 E-value=23 Score=33.94 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=42.4
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch-------hccccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-------WAHEHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~-------fA~~~~~ 451 (609)
.+|++.+++|.||+. ||...++..+.+ .| -+++++|++. +.+....+. +.-|..+
T Consensus 3 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~~ 64 (260)
T 1nff_A 3 GRLTGKVALVSGGAR---GMGASHVRAMVA-EG-------AKVVFGDILD-------EEGKAMAAELADAARYVHLDVTQ 64 (260)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHTGGGEEEEECCTTC
T ss_pred CCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHhhcCceEEEecCCC
Confidence 357788999999754 444445555544 36 3688887641 111111111 1112222
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 92 (260)
T 1nff_A 65 PAQWKAAVDTAVTAFGGLHVLVNNAGIL 92 (260)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455666644 799999777654
No 378
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=54.29 E-value=17 Score=35.75 Aligned_cols=81 Identities=7% Similarity=0.126 Sum_probs=45.1
Q ss_pred CCCCCCceEEEeCcch---HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch-----hc-cc
Q 007301 378 GGSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP-----WA-HE 448 (609)
Q Consensus 378 g~~L~d~rivf~GAGs---Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~-----fA-~~ 448 (609)
..+|+++++||.||++ .|..||+.+++ .|. +++++|++. ...+.+....+. +. -|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCA-----QGA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHH-----CCC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 3468889999999963 44446666654 363 588888751 110111111111 11 12
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 449 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.....++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 22223455666655 799999877654
No 379
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=54.12 E-value=10 Score=39.80 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=27.4
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~-----~G-------~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK-----RG-------RRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-----CC-------CcEEEEeCCCC
Confidence 4689999999999999877764 36 36899998653
No 380
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=54.06 E-value=16 Score=39.24 Aligned_cols=44 Identities=23% Similarity=0.247 Sum_probs=31.6
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhc
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYT 513 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~ 513 (609)
.+++|=.|+++--.|+++.+.+. ++-++| ||...-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 35677788877667888877665 455665 999888888866544
No 381
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=53.95 E-value=11 Score=36.58 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=24.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
--|+|+|||+||+-.|..+.+ .| .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~-----~g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR-----AN-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEecC
Confidence 357999999999998876654 36 468888864
No 382
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=53.84 E-value=30 Score=34.38 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=56.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchh----------cchhcc-ccCC
Q 007301 384 QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHF----------KKPWAH-EHEP 451 (609)
Q Consensus 384 ~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~----------k~~fA~-~~~~ 451 (609)
.+|+|.|| |-.|..+++.|++ .| .+++++|+..--. ..+.+... ...+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLE-----KG-------YEVHGIVRRSSSF--NTGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECCCSSC--CCTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEECCcccc--chhhHHHHhhhhccccCCCceEEEccCCC
Confidence 57999996 7777777776654 25 3688887742100 00112111 111111 1122
Q ss_pred CCCHHHHHhccCCcEEEEccCCCCC----------------CCHHHHHHHHccCC---CcEEEecC
Q 007301 452 VKELVDAVNAIKPTILIGTSGQGRT----------------FTKEVVEAMASLNE---KPIIFSLS 498 (609)
Q Consensus 452 ~~~L~e~V~~vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~e---rPIIFaLS 498 (609)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2457788888899999988775421 12345666665443 57887544
No 383
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=53.70 E-value=9.5 Score=40.16 Aligned_cols=34 Identities=29% Similarity=0.434 Sum_probs=28.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAAS-----YG-------AKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TS-------CCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHH-----CC-------CcEEEEeCC
Confidence 35689999999999999988865 25 479999986
No 384
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=53.62 E-value=8.6 Score=38.81 Aligned_cols=91 Identities=15% Similarity=0.129 Sum_probs=50.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI 462 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v 462 (609)
..||.|+|+|..|...++.+. +..|. +-+.++|++ .+......+.| ..+...++.|+++.-
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~----~~~~~------~lvav~d~~-------~~~~~~~~~~~--g~~~~~~~~~~l~~~ 65 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYT----KSEKL------KLVTCYSRT-------EDKREKFGKRY--NCAGDATMEALLARE 65 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHT----TCSSE------EEEEEECSS-------HHHHHHHHHHH--TCCCCSSHHHHHHCS
T ss_pred cceEEEEccCHHHHHHHHHHH----hCCCc------EEEEEECCC-------HHHHHHHHHHc--CCCCcCCHHHHhcCC
Confidence 368999999997765544432 21121 224466652 11122222222 123367999999877
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 463 KPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 463 kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
++|+++ ++++. ....++++...+. .++|+.
T Consensus 66 ~~D~V~-i~tp~-~~h~~~~~~al~~-gk~vl~ 95 (354)
T 3db2_A 66 DVEMVI-ITVPN-DKHAEVIEQCARS-GKHIYV 95 (354)
T ss_dssp SCCEEE-ECSCT-TSHHHHHHHHHHT-TCEEEE
T ss_pred CCCEEE-EeCCh-HHHHHHHHHHHHc-CCEEEE
Confidence 899888 44444 4556665554432 356554
No 385
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=53.56 E-value=27 Score=33.65 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=49.2
Q ss_pred CceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
+.+|+|.|| |-.|..+++.|++ .| -+++.+|+. +.. + . .+.-+.....++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQ-----NN-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHT-----TT-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHh-----CC-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 7778777777654 25 367777752 100 0 1 111122233567788887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 462 IKPTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 462 vkPtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988765421 13456777765543 6777544
No 386
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=53.53 E-value=52 Score=31.56 Aligned_cols=76 Identities=16% Similarity=0.230 Sum_probs=41.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
+|++.++||.||+. ||...++..+.+ .| -+++++|++. .+..... .+.-|..+..++.+++
T Consensus 5 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~~~~~~----~~~~Dl~~~~~v~~~~ 65 (264)
T 2dtx_A 5 DLRDKVVIVTGASM---GIGRAIAERFVD-EG-------SKVIDLSIHD----PGEAKYD----HIECDVTNPDQVKASI 65 (264)
T ss_dssp GGTTCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSC----CCSCSSE----EEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEecCc----ccCCceE----EEEecCCCHHHHHHHH
Confidence 36778999999753 444555555554 36 3688887641 1100111 1111212223455555
Q ss_pred hcc-----CCcEEEEccCCC
Q 007301 460 NAI-----KPTILIGTSGQG 474 (609)
Q Consensus 460 ~~v-----kPtvLIG~S~~~ 474 (609)
+.+ ++|+||=..+..
T Consensus 66 ~~~~~~~g~iD~lv~~Ag~~ 85 (264)
T 2dtx_A 66 DHIFKEYGSISVLVNNAGIE 85 (264)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 544 699999877654
No 387
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=53.43 E-value=15 Score=36.94 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=34.0
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 360 QGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
++.....++..+.|++..+.. .+++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 158 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 158 NGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred HHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 444333445556667555433 4679999999877766554332 2 474 56888876
No 388
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=53.38 E-value=36 Score=33.11 Aligned_cols=78 Identities=19% Similarity=0.264 Sum_probs=44.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc----------c
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------E 448 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~ 448 (609)
.+|++.++||.||++ ||...++..+.+ .| -+++++|++ . +.++.....+.. |
T Consensus 28 ~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~----~---~~~~~~~~~~~~~~~~~~~~~~D 89 (276)
T 3r1i_A 28 FDLSGKRALITGAST---GIGKKVALAYAE-AG-------AQVAVAARH----S---DALQVVADEIAGVGGKALPIRCD 89 (276)
T ss_dssp GCCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESS----G---GGGHHHHHHHHHTTCCCEEEECC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC----H---HHHHHHHHHHHhcCCeEEEEEcC
Confidence 368889999999854 444455555554 36 368888874 1 123222222211 1
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 449 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..+..++.++++.+ ++|+||=..+..
T Consensus 90 l~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 120 (276)
T 3r1i_A 90 VTQPDQVRGMLDQMTGELGGIDIAVCNAGIV 120 (276)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 12223456666655 799999777654
No 389
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=53.35 E-value=11 Score=39.31 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=26.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-----LG-------MKTACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEeCC
Confidence 3579999999999999977754 25 378999987
No 390
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=53.33 E-value=1.7e+02 Score=29.75 Aligned_cols=127 Identities=17% Similarity=0.176 Sum_probs=85.9
Q ss_pred HHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeee--cCCcchHHHHHHHHHHHHHHhCCCCCCceEEEeCc--chHHH
Q 007301 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGSLADQRFLFLGA--GEAGT 396 (609)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~L~d~rivf~GA--GsAg~ 396 (609)
+-.+||.++++ +--++...+..+|.+|- ++||.| |-..---.=+||=++.-.+..| +|++.||+++|- |+
T Consensus 85 vls~~~~D~iv-iR~~~~~~~~~~la~~~-~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl~~~--- 158 (291)
T 3d6n_B 85 TFEGLGFDYVV-FRVPFVFFPYKEIVKSL-NLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDIKHS--- 158 (291)
T ss_dssp HHHHTTCSEEE-EEESSCCCSCHHHHHTC-SSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCTTC---
T ss_pred HHHHhcCCEEE-EEcCChHHHHHHHHHhC-CCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCCCCC---
Confidence 45678656544 44555444444377774 699999 5455555667787777666554 799999999998 62
Q ss_pred HHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccCCcEEEEccCC
Q 007301 397 GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIKPTILIGTSGQ 473 (609)
Q Consensus 397 GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vkPtvLIG~S~~ 473 (609)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. +.... ..-..++.|+|+. .||+.-+-.+
T Consensus 159 rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~~g------~~~~~d~~eav~~--aDvvy~~~~q 215 (291)
T 3d6n_B 159 RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEVFK------VDVFDDVDKGIDW--ADVVIWLRLQ 215 (291)
T ss_dssp HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGGGC------EEEESSHHHHHHH--CSEEEECCCC
T ss_pred chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHHCC------CEEEcCHHHHhCC--CCEEEEeCcc
Confidence 577777777776 474 69999999884322 21110 1113689999998 9999985443
No 391
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=53.31 E-value=38 Score=32.45 Aligned_cols=77 Identities=21% Similarity=0.274 Sum_probs=40.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHH
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDA 458 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~ 458 (609)
.++.+.+++|.||+. ||...++..+.+ .| -+++++|++. +.++.. ..+.-|..+..++.++
T Consensus 17 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dl~d~~~v~~~ 77 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNR---GIGLAIARAFAD-AG-------DKVAITYRSG-------EPPEGF-LAVKCDITDTEQVEQA 77 (253)
T ss_dssp ---CCCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS-------CCCTTS-EEEECCTTSHHHHHHH
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh-------Hhhccc-eEEEecCCCHHHHHHH
Confidence 356778999999853 444555555554 36 3688887741 123221 1111122222345555
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 007301 459 VNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 459 V~~v-----kPtvLIG~S~~~ 474 (609)
++.+ ++|+||=..+..
T Consensus 78 ~~~~~~~~g~iD~lv~nAg~~ 98 (253)
T 2nm0_A 78 YKEIEETHGPVEVLIANAGVT 98 (253)
T ss_dssp HHHHHHHTCSCSEEEEECSCC
T ss_pred HHHHHHHcCCCCEEEECCCCC
Confidence 5544 589999776643
No 392
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=53.31 E-value=11 Score=40.39 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 356899999999999999888653 5 4689999864
No 393
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=53.26 E-value=12 Score=37.80 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=25.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|+|+|||.+|+..|-.|.+. | .++.++++.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCC
Confidence 699999999999999888753 5 467777775
No 394
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=53.16 E-value=11 Score=39.53 Aligned_cols=31 Identities=23% Similarity=0.306 Sum_probs=25.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
||.|+|+|..|..+|..+... | .+++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988753 5 358888874
No 395
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=53.14 E-value=12 Score=38.05 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+|+|+|||.+|+..|-.|.+. | .++.++|+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 799999999999999888653 6 3577888753
No 396
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=53.00 E-value=13 Score=38.50 Aligned_cols=23 Identities=30% Similarity=0.466 Sum_probs=19.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHH
Q 007301 383 DQRFLFLGAGEAGTGIAELIALE 405 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~ 405 (609)
+--|+|+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 34699999999999999888653
No 397
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=52.96 E-value=19 Score=34.21 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=24.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQ---GIGKAIAARLAA-DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCC---HHHHHHHHHHHH-CCC-------EEEEEeCC
Confidence 357889999999853 344444454444 363 68887764
No 398
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=52.92 E-value=23 Score=33.81 Aligned_cols=38 Identities=29% Similarity=0.316 Sum_probs=25.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 45 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAA---GIGRAIAGTFAK-AG-------ASVVVTDLK 45 (256)
T ss_dssp TCCTTCEEEECSCSS---HHHHHHHHHHHH-HT-------CEEEEEESS
T ss_pred CCCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 468889999999864 444455555544 36 358888874
No 399
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=52.85 E-value=10 Score=41.21 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=28.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35689999999999999988865 363 789999864
No 400
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=52.84 E-value=13 Score=35.47 Aligned_cols=78 Identities=19% Similarity=0.203 Sum_probs=42.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-------cccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-------HEHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-------~~~~~ 451 (609)
.+++++++||.||++ ||...++..+.+ .|. +++++|++- +.++.....+. -|...
T Consensus 5 ~~l~gk~~lVTGas~---gIG~a~a~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 66 (248)
T 3op4_A 5 MNLEGKVALVTGASR---GIGKAIAELLAE-RGA-------KVIGTATSE-------SGAQAISDYLGDNGKGMALNVTN 66 (248)
T ss_dssp TCCTTCEEEESSCSS---HHHHHHHHHHHH-TTC-------EEEEEESSH-------HHHHHHHHHHGGGEEEEECCTTC
T ss_pred cCCCCCEEEEeCCCC---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHhcccceEEEEeCCC
Confidence 357889999999854 444445555544 363 578777631 11222111111 12222
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 67 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 94 (248)
T 3op4_A 67 PESIEAVLKAITDEFGGVDILVNNAGIT 94 (248)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556554 799999877654
No 401
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=52.82 E-value=10 Score=36.34 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=24.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+..|..+.+ .|. ++.+++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSAR-----KGI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHH-----CCC-------cEEEEeCC
Confidence 479999999999999987754 353 57777653
No 402
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=52.71 E-value=21 Score=33.99 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=42.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-cccCCCCCHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-HEHEPVKELVDA 458 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-~~~~~~~~L~e~ 458 (609)
+|++.++||.||+. ||...++..+.+ .|. +++++|++---...-.+.+.. +..+. -+..+..++.++
T Consensus 9 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G~-------~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~ 76 (263)
T 3ak4_A 9 DLSGRKAIVTGGSK---GIGAAIARALDK-AGA-------TVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDAA 76 (263)
T ss_dssp CCTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CCC-------EEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHHH
Confidence 47788999999753 444455555554 363 688887641000000000111 11111 121222345566
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 007301 459 VNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 459 V~~v-----kPtvLIG~S~~~ 474 (609)
++.+ ++|+||=..+..
T Consensus 77 ~~~~~~~~g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 77 MQKAIDALGGFDLLCANAGVS 97 (263)
T ss_dssp HHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 6644 799999877654
No 403
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=52.69 E-value=11 Score=39.12 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~-----~g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ-----LG-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHH-----CC-------CeEEEEeCCC
Confidence 479999999999999977754 25 4789999863
No 404
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=52.69 E-value=91 Score=32.86 Aligned_cols=116 Identities=14% Similarity=0.171 Sum_probs=80.7
Q ss_pred CCcHHHHHHHHcCCCeeee--cCCcchHHHHHHHHHHHHHHhCCC-CCCce--EEEeCc----chHHHHHHHHHHHHHHH
Q 007301 338 NHNAFDLLEKYGTTHLVFN--DDIQGTASVVLAGLISAMKFLGGS-LADQR--FLFLGA----GEAGTGIAELIALEISK 408 (609)
Q Consensus 338 ~~nAf~lL~ryr~~~~~FN--DDiQGTaaV~LAgll~Alr~~g~~-L~d~r--ivf~GA----GsAg~GIA~li~~~~~~ 408 (609)
.+.+.+.|.+|- ++||.| ||. --.=+||=++.-.+..|.+ |++.| |.++|- | --+|+-++.++.+
T Consensus 145 ~~~~~~~lA~~~-~vPVINag~g~--HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~---nrva~Sl~~~~~~ 218 (359)
T 1zq6_A 145 EDQVLKSFAKYS-PVPVINMETIT--HPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLN---TAVANSALTIATR 218 (359)
T ss_dssp TCHHHHHHHHHC-SSCEEESSSSC--CHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCC---SHHHHHHHHHHHH
T ss_pred chHHHHHHHHhC-CCCEEeCCCCC--CcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccc---cchHHHHHHHHHH
Confidence 567777888885 689999 887 6667788888877777765 99999 889998 6 3677777777766
Q ss_pred hcCCCHhhhcCcEEEEccc-CcccCCCccCCchhcchhccc-c---CCCCCHHHHHhccCCcEEEEccC
Q 007301 409 QTNMPLEETRKKIWLVDSK-GLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTSG 472 (609)
Q Consensus 409 ~~G~s~eeAr~~i~lvDs~-GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S~ 472 (609)
.|+ +|.++-.+ |+.-.. .+-..-+.+|+. . ....++.|||+. .||+.-..=
T Consensus 219 -~G~-------~v~~~~P~~~~~~~~---~~~~~~~~~a~~~g~~v~~~~d~~eav~~--aDvVyt~~w 274 (359)
T 1zq6_A 219 -MGM-------DVTLLCPTPDYILDE---RYMDWAAQNVAESGGSLQVSHDIDSAYAG--ADVVYAKSW 274 (359)
T ss_dssp -TTC-------EEEEECSSGGGCCCH---HHHHHHHHHHHHHSCEEEEECCHHHHHTT--CSEEEEECC
T ss_pred -cCC-------EEEEEcCccccCCCH---HHHHHHHHHHHHcCCeEEEECCHHHHhcC--CCEEEECCc
Confidence 475 68888888 774321 111111223322 1 123689999998 999987653
No 405
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=52.64 E-value=18 Score=34.82 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=42.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch----------hc-cc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP----------WA-HE 448 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~----------fA-~~ 448 (609)
+|+++++||.||++ ||...++..+.+ +|. +++++|++- +.++...+. +. -|
T Consensus 17 ~l~~k~vlVTGas~---gIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~D 78 (266)
T 4egf_A 17 RLDGKRALITGATK---GIGADIARAFAA-AGA-------RLVLSGRDV-------SELDAARRALGEQFGTDVHTVAID 78 (266)
T ss_dssp CCTTCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHHhcCCcEEEEEec
Confidence 47889999999853 444445555544 363 588888741 112111111 11 12
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 449 HEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 449 ~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.....++.++++.+ +.|+||=..+..
T Consensus 79 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 79 LAEPDAPAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp TTSTTHHHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 22334566666655 799999776654
No 406
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=52.62 E-value=13 Score=38.91 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=23.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
||.|+|+|..|..+|..+.+ | .+++++|.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999887742 3 358888864
No 407
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=52.61 E-value=17 Score=35.51 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=39.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh------cc-ccCCC
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEPV 452 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f------A~-~~~~~ 452 (609)
++.++++||.||+. ||...|+..+.+ .|. +++++|++- +.+......+ .. |..+.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d~ 86 (272)
T 4dyv_A 25 KTGKKIAIVTGAGS---GVGRAVAVALAG-AGY-------GVALAGRRL-------DALQETAAEIGDDALCVPTDVTDP 86 (272)
T ss_dssp ---CCEEEETTTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHTSCCEEEECCTTSH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHhCCCeEEEEecCCCH
Confidence 35678889999753 344444444444 363 588887641 1122211111 11 11222
Q ss_pred CCHHHHHhcc-----CCcEEEEccCCC
Q 007301 453 KELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 453 ~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
.++.++++.+ ++|+||=..+..
T Consensus 87 ~~v~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 87 DSVRALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455566655 899999877754
No 408
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=52.59 E-value=58 Score=30.74 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=41.7
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhc-chhccccCCCCCHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFK-KPWAHEHEPVKELVDA 458 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k-~~fA~~~~~~~~L~e~ 458 (609)
+|++.+++|.||+. ||...++..+.+ .| -+++++|++-- +.... ..+.-|..+..++.++
T Consensus 4 ~l~~k~vlVTGas~---giG~~ia~~l~~-~G-------~~V~~~~r~~~--------~~~~~~~~~~~D~~d~~~~~~~ 64 (250)
T 2fwm_X 4 DFSGKNVWVTGAGK---GIGYATALAFVE-AG-------AKVTGFDQAFT--------QEQYPFATEVMDVADAAQVAQV 64 (250)
T ss_dssp CCTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESCCC--------SSCCSSEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCchh--------hhcCCceEEEcCCCCHHHHHHH
Confidence 47788999999753 444445555544 36 36888877521 11111 1111122222345556
Q ss_pred Hhcc-----CCcEEEEccCCC
Q 007301 459 VNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 459 V~~v-----kPtvLIG~S~~~ 474 (609)
++.+ ++|+||=..+..
T Consensus 65 ~~~~~~~~g~id~lv~~Ag~~ 85 (250)
T 2fwm_X 65 CQRLLAETERLDALVNAAGIL 85 (250)
T ss_dssp HHHHHHHCSCCCEEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCcC
Confidence 6544 799999777653
No 409
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=52.22 E-value=14 Score=39.61 Aligned_cols=107 Identities=22% Similarity=0.252 Sum_probs=58.2
Q ss_pred CceEEEeCcchHHH-HHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 383 DQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 383 d~rivf~GAGsAg~-GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
-+||.|+|.|-+|+ |+|+++.+ .| -++...|.+ .....+.|.....++--. . +- +-+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~-----~G-------~~V~~~D~~---~~~~~~~l~~~gi~~~~g-~---~~-~~~~- 80 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLAN-----EG-------YQISGSDLA---PNSVTQHLTALGAQIYFH-H---RP-ENVL- 80 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHH-----TT-------CEEEEECSS---CCHHHHHHHHTTCEEESS-C---CG-GGGT-
T ss_pred CCEEEEEEEcHhhHHHHHHHHHh-----CC-------CeEEEEECC---CCHHHHHHHHCCCEEECC-C---CH-HHcC-
Confidence 37999999999999 58887765 37 468888864 110001122111111100 0 11 1123
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEEecCCCCCCCCCCHHHHhccccC-cEEEecCC
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQG-RAIFASGS 525 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~aEct~e~A~~wT~G-raifASGS 525 (609)
.+|.+|=.++.+ .=++++.++.. ..-|||= . +|-++.+.++ +.|-.|||
T Consensus 81 -~~d~vV~Spgi~-~~~p~~~~a~~--~gi~v~~-------~----~e~l~~~~~~~~~IaVTGT 130 (494)
T 4hv4_A 81 -DASVVVVSTAIS-ADNPEIVAARE--ARIPVIR-------R----AEMLAELMRYRHGIAVAGT 130 (494)
T ss_dssp -TCSEEEECTTSC-TTCHHHHHHHH--TTCCEEE-------H----HHHHHHHHTTSEEEEEECS
T ss_pred -CCCEEEECCCCC-CCCHHHHHHHH--CCCCEEc-------H----HHHHHHHhcCCCEEEEecC
Confidence 378888555555 35778877665 2346652 1 3334444444 46777886
No 410
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=52.16 E-value=12 Score=38.57 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
++|||+|||.||+..|..+.+. . .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999888762 0 13 4688888753
No 411
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=52.10 E-value=17 Score=36.36 Aligned_cols=93 Identities=12% Similarity=0.118 Sum_probs=49.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNA 461 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~ 461 (609)
+..||.|+|+|..|...++.+... .+. +-+.++|++ .++ .....+.|-- ..-..++.|+++.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~----~~~------~~~av~d~~----~~~---~~~~a~~~~~-~~~~~~~~~ll~~ 65 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA----GNG------EVVAVSSRT----LES---AQAFANKYHL-PKAYDKLEDMLAD 65 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH----CSE------EEEEEECSC----SST---TCC---CCCC-SCEESCHHHHHTC
T ss_pred CceEEEEEechHHHHHHHHHHHhC----CCc------EEEEEEcCC----HHH---HHHHHHHcCC-CcccCCHHHHhcC
Confidence 457999999998877665554321 121 223456653 121 2222222210 0124689999997
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 462 IKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 462 vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
-++|+++ ++++. .+..++++...+. .++++.
T Consensus 66 ~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 96 (329)
T 3evn_A 66 ESIDVIY-VATIN-QDHYKVAKAALLA-GKHVLV 96 (329)
T ss_dssp TTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred CCCCEEE-ECCCc-HHHHHHHHHHHHC-CCeEEE
Confidence 7789887 55544 4555655544332 355554
No 412
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=52.02 E-value=14 Score=39.14 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=26.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD 425 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD 425 (609)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999988761 15 4799999
No 413
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=51.88 E-value=12 Score=39.64 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=27.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+..|+|+|||.+|+++|-.+.+ .|+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~-----~G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAG-----RGL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEECCC
Confidence 4579999999999999988865 364 588999864
No 414
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=51.73 E-value=16 Score=36.72 Aligned_cols=93 Identities=13% Similarity=0.115 Sum_probs=50.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
.||.|+|+|..|...+..+.. +..+. +-+.++|++ . +......+.|--...-..++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~---~~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITN---KLSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---TCSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHh---hCCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 489999999988766655432 11121 223456652 1 1122222222100122478999999888
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 464 PTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 464 PtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+|+++ ++++. ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 99888 44444 45666666544333 55554
No 415
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=51.55 E-value=11 Score=39.40 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-----~G-------~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-----LG-------LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEeCC
Confidence 4579999999999999977754 36 368999986
No 416
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=51.54 E-value=28 Score=35.37 Aligned_cols=44 Identities=18% Similarity=0.167 Sum_probs=28.2
Q ss_pred HHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 372 SAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 372 ~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
.|+.....--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 183 ~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp HHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred HHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 334333344467899999999877665544432 364 57888885
No 417
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=51.53 E-value=14 Score=40.98 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999888763 5 3699999863
No 418
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=51.35 E-value=9.5 Score=38.85 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCCceEEEeC-cchHHHH-HH----HHHHHHHHHhcCCCHhhh---cCcEEEEcccCcccCCCccCCchhcchhccc--c
Q 007301 381 LADQRFLFLG-AGEAGTG-IA----ELIALEISKQTNMPLEET---RKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--H 449 (609)
Q Consensus 381 L~d~rivf~G-AGsAg~G-IA----~li~~~~~~~~G~s~eeA---r~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~--~ 449 (609)
.+..||.++| +|..|.+ .+ +.+.. ..++....+ .-++.++|++ . +..+.+|+. .
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~----~~~~~l~~~~~~~~~~av~~~~-------~----~~a~~~a~~~~~ 68 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRD----QGGVRLKNGDRIMPDPILVGRS-------A----EKVEALAKRFNI 68 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHH----HTSEECTTSCEEEEEEEEECSS-------S----HHHHHHHHHTTC
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhh----cCceeecCCcccceeeEEEcCC-------H----HHHHHHHHHhCC
Confidence 3456999999 9999987 66 44432 222210000 0011244442 1 112234432 1
Q ss_pred CC-CCCHHHHHhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 450 EP-VKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 450 ~~-~~~L~e~V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+. ..++.|.++.-++|+++ +.+.. .+..+++++..+. .++|+.
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 22 37899999988899887 55544 4666666554432 356654
No 419
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=51.31 E-value=36 Score=33.76 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=31.6
Q ss_pred cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 360 QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 360 QGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
++...-.++..+.+.+..+ .-.++++++.|||..|...+. ++.+ .|. +.+..+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq-~ak~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQ-CAVA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHH-HHHH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHH-HHHH----cCC------cEEEEEec
Confidence 4433333344444444443 346789999999988755443 3333 464 56777775
No 420
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=51.30 E-value=6.9 Score=42.00 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=24.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.||||+|+|.||+-.|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999988876532 12 369999985
No 421
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=51.30 E-value=12 Score=39.09 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=27.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+++|+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 35799999999999999887652 5 3799999874
No 422
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=51.25 E-value=10 Score=37.26 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=26.8
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 456899999999999999888652 53 57788854
No 423
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=51.22 E-value=37 Score=32.54 Aligned_cols=38 Identities=37% Similarity=0.501 Sum_probs=25.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 27 ~~l~~k~vlITGasg---gIG~~la~~L~~-~G-------~~V~~~~r~ 64 (272)
T 1yb1_A 27 KSVTGEIVLITGAGH---GIGRLTAYEFAK-LK-------SKLVLWDIN 64 (272)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEEcC
Confidence 458889999999753 444555555554 36 358888864
No 424
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=51.19 E-value=18 Score=33.76 Aligned_cols=38 Identities=24% Similarity=0.359 Sum_probs=23.9
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (255)
T 1fmc_A 7 LRLDGKCAIITGAGA---GIGKEIAITFAT-AG-------ASVVVSDIN 44 (255)
T ss_dssp GCCTTCEEEETTTTS---HHHHHHHHHHHT-TT-------CEEEEEESC
T ss_pred CCCCCCEEEEECCcc---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 357788999999732 344444555444 35 358888764
No 425
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=51.17 E-value=23 Score=35.36 Aligned_cols=84 Identities=8% Similarity=0.078 Sum_probs=46.3
Q ss_pred CCceEEEeCcchHHH-HHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHh
Q 007301 382 ADQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVN 460 (609)
Q Consensus 382 ~d~rivf~GAGsAg~-GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~ 460 (609)
+..||.|+|+|..|. ..+..+ .. .|. +=+.++|.+ .+| .....+.|- ...-..++.|+++
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l----~~-~~~------~lvav~d~~----~~~---~~~~a~~~~-~~~~~~~~~~ll~ 63 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQL----ID-AGA------ELAGVFESD----SDN---RAKFTSLFP-SVPFAASAEQLIT 63 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHH----HH-TTC------EEEEEECSC----TTS---CHHHHHHST-TCCBCSCHHHHHT
T ss_pred CccEEEEECCChHHHHHhhhhh----cC-CCc------EEEEEeCCC----HHH---HHHHHHhcC-CCcccCCHHHHhh
Confidence 346999999998764 333332 22 232 224577763 222 333333331 1123478999998
Q ss_pred ccCCcEEEEccCCCCCCCHHHHH-HHH
Q 007301 461 AIKPTILIGTSGQGRTFTKEVVE-AMA 486 (609)
Q Consensus 461 ~vkPtvLIG~S~~~g~Ft~evv~-~Ma 486 (609)
.-++|+++ ++++. .+..+++. ++.
T Consensus 64 ~~~~D~V~-i~tp~-~~h~~~~~~al~ 88 (336)
T 2p2s_A 64 DASIDLIA-CAVIP-CDRAELALRTLD 88 (336)
T ss_dssp CTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred CCCCCEEE-EeCCh-hhHHHHHHHHHH
Confidence 87899887 55544 34445544 454
No 426
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=51.12 E-value=9.4 Score=39.30 Aligned_cols=151 Identities=13% Similarity=0.179 Sum_probs=75.3
Q ss_pred CCccccccCCcchHHHHHhcCCCCCceEEEEecCcccccCCCCCCCccccchhhhhHHhhhCCCCCCceeeEEeecCCCc
Q 007301 209 PQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNN 288 (609)
Q Consensus 209 p~Glyis~~d~g~i~~il~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~iGKl~LYta~gGI~P~~~LPI~LDvGTnN 288 (609)
|||--++--|-|++. -....++.+|||.+.=| |.--+. -=||. .+|+.+-+| +
T Consensus 16 ~~~~~~~~~~~~~~~------~~~~Mki~IvTDSt~dL------------~~e~~~----~~~I~---vvPL~v~~~--~ 68 (315)
T 3fys_A 16 PRGSHMASMTGGQQM------GRGSMNIAVVTDSTAYI------------PKEMRE----QHQIH---MIPLQVVFR--E 68 (315)
T ss_dssp ------------------------CCCEEEEEEGGGCC------------CHHHHH----HHTEE---EECCEEECS--S
T ss_pred cCccccccccchhhh------CcCCCcEEEEEECCCCC------------CHHHHH----hCCeE---EEeEEEEEC--C
Confidence 677655554544432 22335799999988533 222111 12677 899998886 3
Q ss_pred cccccCcccccccccCCchhhhHHHHHHHHHHHHH--hcCCCceeeeecCCCCcHHHHHHHHc---CC---Cee--eecC
Q 007301 289 EKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQ--NYGERILIQFEDFANHNAFDLLEKYG---TT---HLV--FNDD 358 (609)
Q Consensus 289 e~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~--~fGp~~lIqfEDf~~~nAf~lL~ryr---~~---~~~--FNDD 358 (609)
++..++. -++ .+||.+.++. .. | . =+.|+--++++.|+ ++ +.+ +..-
T Consensus 69 ~~Y~D~~--------di~-------~~efy~~m~~~~~~-p----~---TSqPs~~~~~~~fe~l~~~~~~Ii~I~iSS~ 125 (315)
T 3fys_A 69 ETYREEI--------ELD-------WKSFYEEVKKHNEL-P----T---TSQPPIGELVALYEELGKSYDAVISIHLSSG 125 (315)
T ss_dssp CEEEBTT--------TBC-------HHHHHHHHHTTTCC-C----E---EECCCHHHHHHHHHHHTTTCSEEEEEESCTT
T ss_pred EEEECCC--------CCC-------HHHHHHHHHhCCCC-c----c---cCCCCHHHHHHHHHHHHhcCCcEEEEeCCCc
Confidence 4333321 022 3566666654 22 2 1 23344444444443 22 222 3333
Q ss_pred CcchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHH--HHHhcCC-CHhhhc
Q 007301 359 IQGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALE--ISKQTNM-PLEETR 418 (609)
Q Consensus 359 iQGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~--~~~~~G~-s~eeAr 418 (609)
.=| -+++.+.....+.+.+|-++=..+++.|..-++..+ |. ++|. +.||..
T Consensus 126 LSG--------Ty~sA~~Aa~~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~-~~G~~s~eeI~ 179 (315)
T 3fys_A 126 ISG--------TFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELI-KNGASSPEDII 179 (315)
T ss_dssp TCS--------HHHHHHHGGGGCSSCEEEEEECSSCHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred HhH--------HHHHHHHHHHhCCCCCEEEECCchhHHHHHHHHHHHHHHH-HcCCCCHHHHH
Confidence 344 455555555556778899998888888877777665 34 4699 988743
No 427
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=51.11 E-value=40 Score=32.31 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=52.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhcc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 462 (609)
||+|.|| |-.|..+++.|++ .| .+++.+|+.. ......+. ....+.. +..+.. +.++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~~---~~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~-- 62 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVE-----LG-------YEVVVVDNLS---SGRREFVN-PSAELHVRDLKDYS-WGAGIK-- 62 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEECCCS---SCCGGGSC-TTSEEECCCTTSTT-TTTTCC--
T ss_pred EEEEECCCChHHHHHHHHHHh-----CC-------CEEEEEeCCC---CCchhhcC-CCceEEECccccHH-HHhhcC--
Confidence 7999998 8888888777765 25 3678877631 11111111 1111111 211222 444444
Q ss_pred CCcEEEEccCCCCCC----------------CHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGRTF----------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 498 (609)
.|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 63 -~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 63 -GDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp -CSEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 39999887754211 245777777766678888655
No 428
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=50.96 E-value=26 Score=33.35 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcch---HHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-------hh-cc
Q 007301 379 GSLADQRFLFLGAGE---AGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-------PW-AH 447 (609)
Q Consensus 379 ~~L~d~rivf~GAGs---Ag~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-------~f-A~ 447 (609)
.++++.++||.||+. .|..+|+.+++ .|. +++++|+.. ...+.+.+... .+ .-
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHE-----AGA-------RLIFTYAGE----RLEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESSG----GGHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHH-----CCC-------EEEEecCch----HHHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 45556665553 363 588887641 10011111111 11 11
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 448 EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 448 ~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
|..+..++.++++.+ ++|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222223566666655 789999877654
No 429
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=50.96 E-value=21 Score=34.93 Aligned_cols=79 Identities=16% Similarity=0.247 Sum_probs=40.1
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh-----------c
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW-----------A 446 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f-----------A 446 (609)
..++++.++||.||++ ||...++..+.+ .| -+++++|++- +.+......+ .
T Consensus 28 ~~~l~gk~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~ 89 (281)
T 4dry_A 28 KGSGEGRIALVTGGGT---GVGRGIAQALSA-EG-------YSVVITGRRP-------DVLDAAAGEIGGRTGNIVRAVV 89 (281)
T ss_dssp ------CEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHHHHHSSCEEEEE
T ss_pred CCCCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3568889999999853 444445555544 36 3688888741 1121111111 1
Q ss_pred cccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 447 HEHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 447 ~~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
-|..+..++.++++.+ ++|+||=..+..
T Consensus 90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 1222223455666655 799999877654
No 430
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.93 E-value=11 Score=39.04 Aligned_cols=32 Identities=28% Similarity=0.305 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ-----LG-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECC
Confidence 479999999999999977754 25 379999986
No 431
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=50.89 E-value=13 Score=38.49 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=27.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+|||+|||.||+..|..|.+.+. .| -+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~--~g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG--SG-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG--GG-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCC--Cc-------CEEEEEeCCC
Confidence 589999999999999999876431 13 3677777653
No 432
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=50.86 E-value=14 Score=38.31 Aligned_cols=37 Identities=22% Similarity=0.337 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
..+|||+|||.||+..|..+.+ .|. ..++.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-----~g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-----SGW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TTC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-----cCc-----CCCEEEEECCCC
Confidence 4689999999999999998865 364 137999987643
No 433
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.84 E-value=12 Score=39.70 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=27.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999888652 5 4799999863
No 434
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=50.56 E-value=31 Score=32.78 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..|+++++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 8 ~~l~~k~vlVTGas~---gIG~aia~~l~~-~G-------~~V~~~~r~ 45 (252)
T 3f1l_A 8 DLLNDRIILVTGASD---GIGREAAMTYAR-YG-------ATVILLGRN 45 (252)
T ss_dssp TTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cccCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 458889999999854 344444454444 36 368888864
No 435
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=50.55 E-value=9.9 Score=39.67 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~-----~g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAM-----YG-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TT-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEcCC
Confidence 4589999999999999988764 25 479999986
No 436
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=50.47 E-value=12 Score=37.84 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=26.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.++||+|||.||+..|..+.+ .|. .-++.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-----~g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-----LDG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-----TCS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHh-----hCC-----CCCEEEEECC
Confidence 4689999999999999988754 353 2357777764
No 437
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=50.45 E-value=16 Score=36.92 Aligned_cols=44 Identities=18% Similarity=0.116 Sum_probs=27.5
Q ss_pred HHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 371 ISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 371 l~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
+.|+.....--.+++++|+|+|..|...+.++.. .|. +++.+|+
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~ 221 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSS 221 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEec
Confidence 4444333444467899999999777665544432 363 5777775
No 438
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=50.30 E-value=15 Score=36.79 Aligned_cols=104 Identities=18% Similarity=0.214 Sum_probs=60.1
Q ss_pred CCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCC----chhcchhcc-ccCCC
Q 007301 379 GSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL----QHFKKPWAH-EHEPV 452 (609)
Q Consensus 379 ~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L----~~~k~~fA~-~~~~~ 452 (609)
..+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- +.+.+ ...+..+.. +..+.
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~----~~~~~~~~~~~~~v~~~~~Dl~d~ 82 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL----KQSEMAMEFNDPRMRFFIGDVRDL 82 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH----HHHHHHHHHCCTTEEEEECCTTCH
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh----hHHHHHHHhcCCCEEEEECCCCCH
Confidence 4577889999996 88888888877642 142 47888876411 00001 000111111 21222
Q ss_pred CCHHHHHhccCCcEEEEccCCCCC----C------------CHHHHHHHHccCCCcEEEecC
Q 007301 453 KELVDAVNAIKPTILIGTSGQGRT----F------------TKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 453 ~~L~e~V~~vkPtvLIG~S~~~g~----F------------t~evv~~Ma~~~erPIIFaLS 498 (609)
.++.++++ ++|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 83 ~~l~~~~~--~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 83 ERLNYALE--GVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp HHHHHHTT--TCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHh--cCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 35667776 49999998876531 0 235667766666667888554
No 439
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=50.25 E-value=11 Score=36.07 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=24.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..|+|+|||.||+-.|..+.. .|+ ++.++|+.
T Consensus 5 yDvvIIG~GpAGl~AA~~la~-----~g~-------~v~liE~~ 36 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR-----SSL-------KPVMYEGF 36 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-----TTC-------CCEEECCS
T ss_pred CcEEEECCCHHHHHHHHHHHH-----CCC-------CEEEEecC
Confidence 369999999999988866544 363 57788864
No 440
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=50.09 E-value=15 Score=38.22 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=27.2
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+..++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 45799999999999999888653 5 478999986
No 441
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=49.96 E-value=16 Score=38.82 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
.+|||+|||.||+..|..|.+. |- .-+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCC
Confidence 4899999999999999888653 21 247888888644
No 442
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=49.88 E-value=34 Score=32.60 Aligned_cols=76 Identities=18% Similarity=0.295 Sum_probs=40.9
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc----------ccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------HEH 449 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA----------~~~ 449 (609)
.+++.++||.||+. ||...|+..+.+ .|. +++++|++. +.+....+.+. -+.
T Consensus 26 ~l~~k~vlITGas~---gIG~~la~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~ 87 (262)
T 3rkr_A 26 SLSGQVAVVTGASR---GIGAAIARKLGS-LGA-------RVVLTARDV-------EKLRAVEREIVAAGGEAESHACDL 87 (262)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEEEESCH-------HHHHHHHHHHHHTTCEEEEEECCT
T ss_pred ccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEECCH-------HHHHHHHHHHHHhCCceeEEEecC
Confidence 46788999999743 333444444444 363 588888741 11222111111 111
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCC
Q 007301 450 EPVKELVDAVNAI-----KPTILIGTSGQ 473 (609)
Q Consensus 450 ~~~~~L~e~V~~v-----kPtvLIG~S~~ 473 (609)
....++.++++.+ ++|+||=..+.
T Consensus 88 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 88 SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 2223455555554 79999987765
No 443
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=49.78 E-value=11 Score=35.42 Aligned_cols=79 Identities=22% Similarity=0.254 Sum_probs=43.6
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-------ccC
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-------EHE 450 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-------~~~ 450 (609)
..+++++++||.||+. ||...++..+.+ .| -+++++|++- +.+....+.+.. +..
T Consensus 9 ~~~~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 70 (249)
T 3f9i_A 9 MIDLTGKTSLITGASS---GIGSAIARLLHK-LG-------SKVIISGSNE-------EKLKSLGNALKDNYTIEVCNLA 70 (249)
T ss_dssp CCCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHHHHCSSEEEEECCTT
T ss_pred cccCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEcCCH-------HHHHHHHHHhccCccEEEcCCC
Confidence 3568899999999853 444445555544 36 3688887631 112222111111 112
Q ss_pred CCCCHHHHHhcc-CCcEEEEccCCC
Q 007301 451 PVKELVDAVNAI-KPTILIGTSGQG 474 (609)
Q Consensus 451 ~~~~L~e~V~~v-kPtvLIG~S~~~ 474 (609)
...++.++++.. ++|+||=..+..
T Consensus 71 ~~~~~~~~~~~~~~id~li~~Ag~~ 95 (249)
T 3f9i_A 71 NKEECSNLISKTSNLDILVCNAGIT 95 (249)
T ss_dssp SHHHHHHHHHTCSCCSEEEECCC--
T ss_pred CHHHHHHHHHhcCCCCEEEECCCCC
Confidence 223566677665 689999777643
No 444
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=49.77 E-value=90 Score=32.17 Aligned_cols=130 Identities=18% Similarity=0.283 Sum_probs=85.4
Q ss_pred HHHhcCCCceeeeecCCCCcHHHHHHHHcCCCeeeecCC-cchHHHHHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHH
Q 007301 321 VKQNYGERILIQFEDFANHNAFDLLEKYGTTHLVFNDDI-QGTASVVLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIA 399 (609)
Q Consensus 321 v~~~fGp~~lIqfEDf~~~nAf~lL~ryr~~~~~FNDDi-QGTaaV~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA 399 (609)
+-.+| .++++ +--+ .+.+.+.|.+|- ++||.|-.- .---.=+||=++.-.+..| +|++.||+++|-| --+|
T Consensus 97 vls~~-~D~iv-iR~~-~~~~~~~lA~~~-~vPVINa~~~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGD~---~rva 168 (315)
T 1pvv_A 97 VLSRY-VDAIM-ARVY-DHKDVEDLAKYA-TVPVINGLSDFSHPCQALADYMTIWEKKG-TIKGVKVVYVGDG---NNVA 168 (315)
T ss_dssp HHTTT-CSEEE-EECS-SHHHHHHHHHHC-SSCEEEEECSSCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC---CHHH
T ss_pred HHHHh-CcEEE-EecC-chHHHHHHHHhC-CCCEEcCCCCCCCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC---cchH
Confidence 45567 45443 4444 466677778875 589998321 3344567888777666654 7999999999998 2688
Q ss_pred HHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc-c---CCCCCHHHHHhccCCcEEEEcc
Q 007301 400 ELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-H---EPVKELVDAVNAIKPTILIGTS 471 (609)
Q Consensus 400 ~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-~---~~~~~L~e~V~~vkPtvLIG~S 471 (609)
+-++.++.+ .|+ +|.++-.+|+.-.. + +-..-+.+|+. . ....++.|+|+. .||+.-..
T Consensus 169 ~Sl~~~~~~-~g~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDvvy~~~ 231 (315)
T 1pvv_A 169 HSLMIAGTK-LGA-------DVVVATPEGYEPDE--K-VIKWAEQNAAESGGSFELLHDPVKAVKD--ADVIYTDV 231 (315)
T ss_dssp HHHHHHHHH-TTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHTTT--CSEEEECC
T ss_pred HHHHHHHHH-CCC-------EEEEECCccccCCH--H-HHHHHHHHHHHcCCeEEEEeCHHHHhCC--CCEEEEcc
Confidence 888888877 475 68999888874321 1 11111223322 1 123689999998 99998754
No 445
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=49.76 E-value=31 Score=35.02 Aligned_cols=49 Identities=14% Similarity=0.219 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
+....+.+++..+....+++++|.|||..|..++.+... .|. +++.+|+
T Consensus 171 ~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~ 219 (366)
T 1yqd_A 171 AGITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVIST 219 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEES
T ss_pred hHHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeC
Confidence 333445667766655478999999999877766655432 362 5777775
No 446
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=49.68 E-value=14 Score=39.57 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=28.4
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
.+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 456899999999999999888753 64 688998864
No 447
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=49.65 E-value=12 Score=36.48 Aligned_cols=78 Identities=18% Similarity=0.268 Sum_probs=41.3
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchh------cc-ccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPW------AH-EHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~f------A~-~~~~ 451 (609)
.+|+++++||.||+. ||...|+..+.+ .| -+++++|++. +.+......+ .+ |..+
T Consensus 25 ~~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~d 86 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGA---GIGLAVARRLAD-EG-------CHVLCADIDG-------DAADAAATKIGCGAAACRVDVSD 86 (277)
T ss_dssp --CTTCEEEETTTTS---THHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHCSSCEEEECCTTC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHcCCcceEEEecCCC
Confidence 357889999999753 333444444444 36 3688888641 1122111111 11 2122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 87 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 87 EQQIIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556555 799999777654
No 448
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=49.64 E-value=15 Score=34.99 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=25.0
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.++||.||+. ||...|+..+.+ .| -+++++|++
T Consensus 12 ~~l~~k~vlITGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 49 (278)
T 2bgk_A 12 NRLQDKVAIITGGAG---GIGETTAKLFVR-YG-------AKVVIADIA 49 (278)
T ss_dssp CTTTTCEEEEESTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccccCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEcCC
Confidence 457889999999843 444555555544 36 368888764
No 449
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=49.61 E-value=48 Score=31.93 Aligned_cols=38 Identities=21% Similarity=0.362 Sum_probs=26.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+++++||.||++ ||...++..+.+ .| -+++++|++
T Consensus 2 ~~l~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~ 39 (274)
T 3e03_A 2 LTLSGKTLFITGASR---GIGLAIALRAAR-DG-------ANVAIAAKS 39 (274)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEecc
Confidence 357889999999864 555556665555 36 368888875
No 450
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=49.59 E-value=14 Score=38.59 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=26.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 35799999999999999777653 5 479999983
No 451
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=49.58 E-value=14 Score=38.76 Aligned_cols=33 Identities=21% Similarity=0.425 Sum_probs=27.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+..++|+|||.||+..|..+.+ .| .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-----~G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-----LG-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-----Cc-------CEEEEEeCC
Confidence 4689999999999999988765 36 468999984
No 452
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=49.55 E-value=15 Score=39.08 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=29.3
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
...+|||+|||.||+..|..|.+. +. ..+|.|+|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 356899999999999999888653 21 257999998643
No 453
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.51 E-value=14 Score=38.56 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=27.3
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+..++|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-----~G-------~~V~liEk~~ 37 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-----AK-------YNVLMADPKG 37 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECTTS
T ss_pred cceEEEECCCHHHHHHHHHHHh-----CC-------CeEEEEECCC
Confidence 3579999999999999988764 36 4799999654
No 454
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=49.44 E-value=14 Score=38.98 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=62.2
Q ss_pred CceEEEeC-cchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEc--ccCc---ccCCCccCCchhcchhccccCCCCCHH
Q 007301 383 DQRFLFLG-AGEAGTGIAELIALEISKQTNMPLEETRKKIWLVD--SKGL---IVSSRLESLQHFKKPWAHEHEPVKELV 456 (609)
Q Consensus 383 d~rivf~G-AGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvD--s~GL---i~~~R~~~L~~~k~~fA~~~~~~~~L~ 456 (609)
..||.|+| ||..|..+|-+|+.. ++-- |. ..+.|+| .+.. +.-...| |++-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~-e~-~~l~L~d~d~~~~~~~~~G~amD-L~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFG-QD-QPIALKLLGSERSFQALEGVAME-LEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTC-TT-CCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCC-CC-ceeEEEecCccchhhhhHHHHHh-HHhhhhhhcCCcEEecCCH
Confidence 36899999 799999988777652 4410 10 1255544 3210 0000012 4443334543222124567
Q ss_pred HHHhccCCcEEEEccCCC---CC-----------CCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 457 DAVNAIKPTILIGTSGQG---RT-----------FTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 457 e~V~~vkPtvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
++++. .|++|=+.+.+ |- .=+++++.++++ +..-||+-.|||.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 88887 88887555443 21 113455667776 7889999999996
No 455
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=49.39 E-value=20 Score=36.08 Aligned_cols=49 Identities=20% Similarity=0.149 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 366 VLAGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 366 ~LAgll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
.++..+.|++..+. -..++|+|+|||..|...+.+.. + .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAK-A----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHH-H----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 33444556655443 34679999999977766554443 2 364 57888875
No 456
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=49.39 E-value=16 Score=35.49 Aligned_cols=78 Identities=13% Similarity=0.229 Sum_probs=44.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc------hhc-cccCCC
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK------PWA-HEHEPV 452 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~------~fA-~~~~~~ 452 (609)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.+....+ .+. -|....
T Consensus 13 ~l~gk~vlVTGas~---gIG~~~a~~L~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 13 SFAQRTVVITGANS---GLGAVTARELAR-RG-------ATVIMAVRDT-------RKGEAAARTMAGQVEVRELDLQDL 74 (291)
T ss_dssp CCTTCEEEEECCSS---HHHHHHHHHHHH-TT-------CEEEEEESCH-------HHHHHHHTTSSSEEEEEECCTTCH
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHhcCCeeEEEcCCCCH
Confidence 57889999999853 444455555544 36 3688888741 11111111 111 122223
Q ss_pred CCHHHHHhcc-CCcEEEEccCCCC
Q 007301 453 KELVDAVNAI-KPTILIGTSGQGR 475 (609)
Q Consensus 453 ~~L~e~V~~v-kPtvLIG~S~~~g 475 (609)
.++.++++.+ ++|+||=..+..+
T Consensus 75 ~~v~~~~~~~~~iD~lv~nAg~~~ 98 (291)
T 3rd5_A 75 SSVRRFADGVSGADVLINNAGIMA 98 (291)
T ss_dssp HHHHHHHHTCCCEEEEEECCCCCS
T ss_pred HHHHHHHHhcCCCCEEEECCcCCC
Confidence 4566777776 7899998776543
No 457
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=49.34 E-value=35 Score=32.52 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=43.3
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc----------cc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH----------EH 449 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~----------~~ 449 (609)
++++.++||.||++ ||...++..+.+ .|. +++++|++. +.+......+.. |.
T Consensus 4 ~~~~k~vlVTGas~---GIG~aia~~l~~-~G~-------~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~Dv 65 (252)
T 3h7a_A 4 TPRNATVAVIGAGD---YIGAEIAKKFAA-EGF-------TVFAGRRNG-------EKLAPLVAEIEAAGGRIVARSLDA 65 (252)
T ss_dssp -CCSCEEEEECCSS---HHHHHHHHHHHH-TTC-------EEEEEESSG-------GGGHHHHHHHHHTTCEEEEEECCT
T ss_pred CCCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEeCCH-------HHHHHHHHHHHhcCCeEEEEECcC
Confidence 57788999999864 455555555554 363 688888741 123222222111 11
Q ss_pred CCCCCHHHHHhcc----CCcEEEEccCCC
Q 007301 450 EPVKELVDAVNAI----KPTILIGTSGQG 474 (609)
Q Consensus 450 ~~~~~L~e~V~~v----kPtvLIG~S~~~ 474 (609)
.+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~v~~~~~~~~~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 66 RNEDEVTAFLNAADAHAPLEVTIFNVGAN 94 (252)
T ss_dssp TCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHhhCCceEEEECCCcC
Confidence 2223455555554 789999776653
No 458
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=49.33 E-value=27 Score=35.02 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhCCCCCC--ceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 364 SVVLAGLISAMKFLGGSLAD--QRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 364 aV~LAgll~Alr~~g~~L~d--~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
...++..+.|+...+.--.+ ++++|.|| |..|..++.++.. .|. ++++.+|+.
T Consensus 140 ~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 140 GMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred ccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 34445555666333333356 89999998 8887777665543 363 478888863
No 459
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=49.31 E-value=31 Score=34.07 Aligned_cols=102 Identities=15% Similarity=0.228 Sum_probs=53.4
Q ss_pred CCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 381 LADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
++..+|+|.|| |-.|..+++.|++ .|. .+++++|+..--. ....+.... +.-+......+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g~------~~V~~~~r~~~~~--~~~~~~~~~--~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALND-----KGI------TDILVVDNLKDGT--KFVNLVDLN--IADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHH-----TTC------CCEEEEECCSSGG--GGGGTTTSC--CSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-----CCC------cEEEEEecCCCcc--hhhcccCce--EeeecCcHHHHHHHH
Confidence 55678999998 7778777777654 252 4677777642100 000111110 111111112355555
Q ss_pred hcc---CCcEEEEccCCCCC--------------CCHHHHHHHHccCCCcEEEecC
Q 007301 460 NAI---KPTILIGTSGQGRT--------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 460 ~~v---kPtvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+.. ++|++|=+.+.... -|..+++++.+..- .+||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 69999988876532 13457777766555 7887543
No 460
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=49.30 E-value=14 Score=39.73 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=28.9
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
..+|||+|||.||.-.|-.|..... .| -+|.|+|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999988876420 24 46889998643
No 461
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=49.26 E-value=32 Score=31.88 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=24.7
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++
T Consensus 3 ~~~~~~~vlVtGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 40 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTR---GIGRAIAEKLAS-AG-------STVIITGTS 40 (248)
T ss_dssp CCCTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEESS
T ss_pred cccCCCEEEEECCCc---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999843 444555555544 36 368888764
No 462
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=49.17 E-value=16 Score=38.60 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=28.8
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 47899999999999999988764 20 125789999864
No 463
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=49.10 E-value=14 Score=39.44 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=26.6
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+.+|+|+|||.+|+..|-.|.. .|+ ++.++|+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL-----GGV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECC
Confidence 56789999999999999988765 365 46677754
No 464
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=49.06 E-value=14 Score=39.50 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=28.1
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
..+|||+|||.||+..|-.|.+... .| -++.|+|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999988865310 25 3688999854
No 465
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=49.04 E-value=29 Score=34.68 Aligned_cols=46 Identities=17% Similarity=0.018 Sum_probs=31.2
Q ss_pred CCHHHHHhccC-CcEEEEccCCCCC----------------CCHHHHHHHHccCCCcEEEecC
Q 007301 453 KELVDAVNAIK-PTILIGTSGQGRT----------------FTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 453 ~~L~e~V~~vk-PtvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 498 (609)
.++.++++..+ +|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 35777787666 9999988875431 1345777777666677888533
No 466
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=49.03 E-value=13 Score=38.63 Aligned_cols=32 Identities=19% Similarity=0.404 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+|+|+|||.||+-.|-.|.+. |+ ++.++|+.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999998877653 64 68888865
No 467
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=49.03 E-value=29 Score=32.52 Aligned_cols=70 Identities=13% Similarity=0.174 Sum_probs=39.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhcc-
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAI- 462 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~v- 462 (609)
.++||.||+. ||...++..+.+ .| -+++++|++- . .+.. .+.-+.....++.++++.+
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~---~~~~Dl~~~~~v~~~~~~~~ 60 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEA-AG-------HQIVGIDIRD----A---EVIA---DLSTAEGRKQAIADVLAKCS 60 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHTTCT
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCc----h---hhcc---ccccCCCCHHHHHHHHHHhC
Confidence 3688988753 455555555554 36 3588887641 1 1211 1111111123566777765
Q ss_pred -CCcEEEEccCCC
Q 007301 463 -KPTILIGTSGQG 474 (609)
Q Consensus 463 -kPtvLIG~S~~~ 474 (609)
++|+||=..+..
T Consensus 61 ~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 61 KGMDGLVLCAGLG 73 (257)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 789999877654
No 468
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=48.95 E-value=15 Score=35.27 Aligned_cols=76 Identities=13% Similarity=0.201 Sum_probs=40.0
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch------hcc-ccCCCC
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAH-EHEPVK 453 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~-~~~~~~ 453 (609)
+...+++|.||+. ||...++..+.+ .| -+++++|++- +.+...... +.+ +.....
T Consensus 3 ~~~k~vlVTGas~---gIG~~~a~~l~~-~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~ 64 (281)
T 3m1a_A 3 ESAKVWLVTGASS---GFGRAIAEAAVA-AG-------DTVIGTARRT-------EALDDLVAAYPDRAEAISLDVTDGE 64 (281)
T ss_dssp -CCCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHCTTTEEEEECCTTCHH
T ss_pred CCCcEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHhccCCceEEEeeCCCHH
Confidence 4567899999742 333344444443 36 3688887641 122222111 111 212223
Q ss_pred CHHHHHhcc-----CCcEEEEccCCC
Q 007301 454 ELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 454 ~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
++.++++.+ ++|+||=..+..
T Consensus 65 ~~~~~~~~~~~~~g~id~lv~~Ag~~ 90 (281)
T 3m1a_A 65 RIDVVAADVLARYGRVDVLVNNAGRT 90 (281)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCE
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 566666655 899999877653
No 469
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=48.92 E-value=13 Score=37.22 Aligned_cols=90 Identities=9% Similarity=0.050 Sum_probs=50.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc--c-CCCCCHHHH
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE--H-EPVKELVDA 458 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~--~-~~~~~L~e~ 458 (609)
+..||.|+|+|..|...++.+.. ..+. +-+.++|++ . +.. +.++.. . .-..++.|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~----~~~~------~l~av~d~~----~---~~~----~~~~~~~~~~~~~~~~~~l 62 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRE----SAQA------EVRGIASRR----L---ENA----QKMAKELAIPVAYGSYEEL 62 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHH----SSSE------EEEEEBCSS----S---HHH----HHHHHHTTCCCCBSSHHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHh----CCCc------EEEEEEeCC----H---HHH----HHHHHHcCCCceeCCHHHH
Confidence 45799999999988776655432 1121 223355652 1 111 233332 1 234789999
Q ss_pred HhccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 459 VNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 459 V~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
++.-++|+++ ++++.. ...++++...+. .++|+.
T Consensus 63 l~~~~~D~V~-i~tp~~-~h~~~~~~al~~-gk~vl~ 96 (330)
T 3e9m_A 63 CKDETIDIIY-IPTYNQ-GHYSAAKLALSQ-GKPVLL 96 (330)
T ss_dssp HHCTTCSEEE-ECCCGG-GHHHHHHHHHHT-TCCEEE
T ss_pred hcCCCCCEEE-EcCCCH-HHHHHHHHHHHC-CCeEEE
Confidence 9977799887 555443 455555543332 355554
No 470
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=48.73 E-value=21 Score=33.40 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=24.8
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.++++.+++|.||+. ||...++..+.+ .| -+++++|++
T Consensus 7 ~~~~~k~vlITGasg---giG~~la~~l~~-~G-------~~V~~~~r~ 44 (254)
T 2wsb_A 7 FRLDGACAAVTGAGS---GIGLEICRAFAA-SG-------ARLILIDRE 44 (254)
T ss_dssp TCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred cCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357888999999743 444455555544 36 358888874
No 471
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=48.70 E-value=11 Score=39.63 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCc
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGL 429 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GL 429 (609)
.+|||+|||.||...|-.|.+... .| -++.|+|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999988876431 24 36888887643
No 472
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=48.55 E-value=11 Score=38.19 Aligned_cols=36 Identities=31% Similarity=0.430 Sum_probs=30.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|++.++||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999988764 5 468888864
No 473
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=48.48 E-value=15 Score=39.17 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=28.9
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLI 430 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi 430 (609)
...+|+|+|||.||+..|..+.. .|+ ++.++|+..-+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL-----LGA-------RVVLVEKRIKF 127 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESCSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHH-----CCC-------eEEEEEecccc
Confidence 35689999999999999888765 363 68889876433
No 474
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=48.46 E-value=19 Score=34.34 Aligned_cols=78 Identities=13% Similarity=0.141 Sum_probs=42.4
Q ss_pred CCCceEEEeCcc---hHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcc-----hhc-cccCC
Q 007301 381 LADQRFLFLGAG---EAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKK-----PWA-HEHEP 451 (609)
Q Consensus 381 L~d~rivf~GAG---sAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~-----~fA-~~~~~ 451 (609)
|+++++||.||+ -.|..+|+.+++ .|. +++++|++. . ..+.+.+... .+. -|..+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~~---~-~~~~~~~l~~~~~~~~~~~~D~~~ 70 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQND---K-LKGRVEEFAAQLGSDIVLQCDVAE 70 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESST---T-THHHHHHHHHHTTCCCEEECCTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCcH---H-HHHHHHHHHHhcCCcEEEEccCCC
Confidence 678899999984 455556655543 363 588888753 1 0011111111 111 12122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 98 (265)
T 1qsg_A 71 DASIDTMFAELGKVWPKFDGFVHSIGFA 98 (265)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455556544 789999887764
No 475
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=48.45 E-value=26 Score=33.32 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=41.8
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCC-chhcchhc-cccCCCCCHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESL-QHFKKPWA-HEHEPVKELVD 457 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L-~~~k~~fA-~~~~~~~~L~e 457 (609)
+|++.+++|.||+. ||...++..+.+ .| -+++++|++- ++ +.+ ......+. -|..+..++.+
T Consensus 3 ~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~~----~~-~~~~~~~~~~~~~~D~~~~~~~~~ 66 (256)
T 2d1y_A 3 LFAGKGVLVTGGAR---GIGRAIAQAFAR-EG-------ALVALCDLRP----EG-KEVAEAIGGAFFQVDLEDERERVR 66 (256)
T ss_dssp TTTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEESST----TH-HHHHHHHTCEEEECCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCh----hH-HHHHHHhhCCEEEeeCCCHHHHHH
Confidence 46778999999753 444445555544 36 3688887641 11 101 00000111 12222234555
Q ss_pred HHhcc-----CCcEEEEccCCC
Q 007301 458 AVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 458 ~V~~v-----kPtvLIG~S~~~ 474 (609)
+++.+ ++|+||=..+..
T Consensus 67 ~~~~~~~~~g~iD~lv~~Ag~~ 88 (256)
T 2d1y_A 67 FVEEAAYALGRVDVLVNNAAIA 88 (256)
T ss_dssp HHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 66554 799999877654
No 476
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=48.40 E-value=28 Score=32.72 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=43.7
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcch------hcc-ccCC
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKP------WAH-EHEP 451 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~------fA~-~~~~ 451 (609)
.++++.+++|.||.. ||...++..+.+ .| -+++++|++- . .+....+. +.. +...
T Consensus 8 ~~~~~k~vlVTGasg---giG~~~a~~l~~-~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~D~~~ 69 (265)
T 2o23_A 8 RSVKGLVAVITGGAS---GLGLATAERLVG-QG-------ASAVLLDLPN----S---GGEAQAKKLGNNCVFAPADVTS 69 (265)
T ss_dssp CCCTTCEEEEETTTS---HHHHHHHHHHHH-TT-------CEEEEEECTT----S---SHHHHHHHHCTTEEEEECCTTC
T ss_pred cCCCCCEEEEECCCC---hHHHHHHHHHHH-CC-------CEEEEEeCCc----H---hHHHHHHHhCCceEEEEcCCCC
Confidence 467889999999843 444555555554 36 3688887741 1 12211111 111 1122
Q ss_pred CCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 452 VKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 452 ~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
..++.++++.+ ++|+||=..+..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (265)
T 2o23_A 70 EKDVQTALALAKGKFGRVDVAVNCAGIA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCEEEECCccC
Confidence 23466666654 799999877654
No 477
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=48.38 E-value=14 Score=39.40 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=27.1
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.-++..|+|+|||.+|+..|-.|.. .|+ ++.++|++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~-----~G~-------~v~vlE~~ 43 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRL-----AGV-------EVVVLERL 43 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH-----TTC-------CEEEEESC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEeCC
Confidence 3456789999999999999988765 365 46666654
No 478
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=48.25 E-value=22 Score=33.45 Aligned_cols=36 Identities=14% Similarity=0.313 Sum_probs=23.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
++++.+++|.||.. ||...++..+.+ .| -+++++|+
T Consensus 4 ~l~~k~vlITGasg---giG~~~a~~l~~-~G-------~~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSST---GLGKSMAIRFAT-EK-------AKVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSS---HHHHHHHHHHHH-TT-------CEEEEEES
T ss_pred CCCCCEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEcC
Confidence 47788999999753 444555555544 36 35888876
No 479
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=48.24 E-value=4.7 Score=42.68 Aligned_cols=25 Identities=28% Similarity=0.438 Sum_probs=21.2
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHH
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALE 405 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~ 405 (609)
..+.+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3456899999999999999988763
No 480
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=48.20 E-value=10 Score=36.13 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=55.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc-ccCCCCCHHHHHhcc
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH-EHEPVKELVDAVNAI 462 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~-~~~~~~~L~e~V~~v 462 (609)
+|+|.|| |-.|..+++.+++. ..| .+++.+|++. ++...+......+.. +..+..++.++++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 87887777766531 003 3677777641 111111111111211 22222457778875
Q ss_pred CCcEEEEccCCCC------CCCHHHHHHHHccCCCcEEEecC
Q 007301 463 KPTILIGTSGQGR------TFTKEVVEAMASLNEKPIIFSLS 498 (609)
Q Consensus 463 kPtvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIFaLS 498 (609)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998877521 02356777777666667887543
No 481
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.19 E-value=31 Score=33.71 Aligned_cols=77 Identities=16% Similarity=0.255 Sum_probs=41.6
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc---------c-cc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA---------H-EH 449 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA---------~-~~ 449 (609)
.+++.++||.||++ ||...++..+.+ .| -+++++|++- +.+......+. + |.
T Consensus 25 ~~~~k~~lVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dv 86 (283)
T 3v8b_A 25 NQPSPVALITGAGS---GIGRATALALAA-DG-------VTVGALGRTR-------TEVEEVADEIVGAGGQAIALEADV 86 (283)
T ss_dssp --CCCEEEEESCSS---HHHHHHHHHHHH-TT-------CEEEEEESSH-------HHHHHHHHHHTTTTCCEEEEECCT
T ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHHHHHHHHhcCCcEEEEEccC
Confidence 46678999999854 444455555544 36 3688888641 11222111111 1 11
Q ss_pred CCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 450 EPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 450 ~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
....++.++++.+ ++|+||=..+..
T Consensus 87 ~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 87 SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 2223455666655 799999777654
No 482
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=48.01 E-value=11 Score=37.30 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=25.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 385 RFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 385 rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 7999999999999998886410 024 368888875
No 483
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.01 E-value=16 Score=35.32 Aligned_cols=100 Identities=14% Similarity=0.212 Sum_probs=52.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhcc------ccCCCCCHHH
Q 007301 384 QRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAH------EHEPVKELVD 457 (609)
Q Consensus 384 ~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~------~~~~~~~L~e 457 (609)
.||.|+|+|..|..+|..+... | .+++++|++.= +.+.+......... ......+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999888653 5 36888887421 00001100000000 0000012222
Q ss_pred HHhcc-CCcEEEEccCCCCCCCHHHHHHHHcc-CCCcEEEecCCCC
Q 007301 458 AVNAI-KPTILIGTSGQGRTFTKEVVEAMASL-NEKPIIFSLSNPT 501 (609)
Q Consensus 458 ~V~~v-kPtvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 501 (609)
+.+.+ +.|++|= +... -..+++++.++.. .+..+|..++|..
T Consensus 68 ~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~ 111 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGL 111 (316)
T ss_dssp CCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSS
T ss_pred hcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 22211 3677663 3222 2457788777654 3456777788865
No 484
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.99 E-value=40 Score=33.42 Aligned_cols=47 Identities=21% Similarity=0.172 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 368 AGLISAMKFLGGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 368 Agll~Alr~~g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
...+.+++..+. -..++++|+|||..|.-.+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344566776655 3567999999998885444433322 23 57888876
No 485
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=47.86 E-value=25 Score=33.06 Aligned_cols=77 Identities=12% Similarity=0.153 Sum_probs=42.6
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc----------cc
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA----------HE 448 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA----------~~ 448 (609)
.+++++++||.||.. ||...++..+.+ .|. +++++|++ .+.+....+.+. -|
T Consensus 5 ~~~~~k~vlITGas~---giG~~~a~~l~~-~G~-------~V~~~~r~-------~~~~~~~~~~~~~~~~~~~~~~~D 66 (253)
T 3qiv_A 5 MRFENKVGIVTGSGG---GIGQAYAEALAR-EGA-------AVVVADIN-------AEAAEAVAKQIVADGGTAISVAVD 66 (253)
T ss_dssp CTTTTCEEEEETTTS---HHHHHHHHHHHH-TTC-------EEEEEESC-------HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEECCCC---hHHHHHHHHHHH-CCC-------EEEEEcCC-------HHHHHHHHHHHHhcCCcEEEEEcc
Confidence 467889999999843 444444454444 363 58888863 111222111111 01
Q ss_pred cCCCCCHHHHHhcc-----CCcEEEEccCC
Q 007301 449 HEPVKELVDAVNAI-----KPTILIGTSGQ 473 (609)
Q Consensus 449 ~~~~~~L~e~V~~v-----kPtvLIG~S~~ 473 (609)
..+..++.++++.+ ++|+||=..+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 67 VSDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 12223455566554 89999987765
No 486
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=47.73 E-value=16 Score=38.16 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=27.5
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+|+|+|||.||+..|..+.+ .| .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~-----~G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQ-----LG-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH-----CC-------CeEEEEecCC
Confidence 3579999999999999988865 26 3799999853
No 487
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=47.65 E-value=49 Score=31.95 Aligned_cols=76 Identities=12% Similarity=0.139 Sum_probs=40.4
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
+|+++++||.||++ ||...++..+.+ .| -+++++|++- +.+... ....-+..+..++.+++
T Consensus 25 ~l~gk~vlVTGas~---gIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~-~~~~~Dv~~~~~~~~~~ 85 (266)
T 3uxy_A 25 GFEGKVALVTGAAG---GIGGAVVTALRA-AG-------ARVAVADRAV-------AGIAAD-LHLPGDLREAAYADGLP 85 (266)
T ss_dssp -CTTCEEEESSTTS---HHHHHHHHHHHH-TT-------CEEEECSSCC-------TTSCCS-EECCCCTTSHHHHHHHH
T ss_pred CCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEeCCH-------HHHHhh-hccCcCCCCHHHHHHHH
Confidence 57888999999854 444555555554 36 3688887631 112111 11111111112344444
Q ss_pred hcc-----CCcEEEEccCCC
Q 007301 460 NAI-----KPTILIGTSGQG 474 (609)
Q Consensus 460 ~~v-----kPtvLIG~S~~~ 474 (609)
+.+ ++|+||=..+..
T Consensus 86 ~~~~~~~g~iD~lvnnAg~~ 105 (266)
T 3uxy_A 86 GAVAAGLGRLDIVVNNAGVI 105 (266)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHhcCCCCEEEECCCCC
Confidence 433 799999877654
No 488
>2x8r_A Glycosyl hydrolase; peptidoglycan cleavage, endo-N-acetylmuramidases, motif; 1.70A {Aspergillus fumigatus}
Probab=47.63 E-value=29 Score=33.10 Aligned_cols=63 Identities=16% Similarity=0.234 Sum_probs=42.6
Q ss_pred hhhHHhhhC-CCCC-CceeeEEeecCCCccccccCcccccccccCCchhhhHHHHHHHHHHHHHhcCCCceeee
Q 007301 262 KLSLYTALG-GIRP-SACLPVTIDVGTNNEKLLDDEFYIGLRQKRAIGQEYAELLHEFMTAVKQNYGERILIQF 333 (609)
Q Consensus 262 Kl~LYta~g-GI~P-~~~LPI~LDvGTnNe~LL~Dp~YlGlr~~R~~geey~~~idEfv~Av~~~fGp~~lIqf 333 (609)
.+.-|.... +..+ ...||++||+-.+.- |-+...++.++..+.+..|++.|++.+|-+++|-.
T Consensus 74 qA~~f~~~~~~~~~~~~~lp~~lD~E~~~~---------~~~~~~~~~~~~~~~~~~f~~~v~~~~G~~p~iYt 138 (210)
T 2x8r_A 74 QAKFFLKNGGGWSDDNRTLPGMLDIEYNPY---------GATCYGLSHSQMVAWIHDFVNEYHHATSRWPMIYT 138 (210)
T ss_dssp HHHHHHTTTCCCCSSSSBCCCEEECCCCTT---------SCGGGGCCHHHHHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred HHHHHHHHhcccCCCCCccceEEeeeccCC---------cccccCCCHHHHHHHHHHHHHHHHHHHCCccEEEc
Confidence 444444443 3322 348999999975321 11223456788899999999999999988888854
No 489
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=47.58 E-value=47 Score=33.09 Aligned_cols=79 Identities=20% Similarity=0.338 Sum_probs=51.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHHhccC
Q 007301 385 RFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAVNAIK 463 (609)
Q Consensus 385 rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V~~vk 463 (609)
||+|.|| |-.|..+++.|++. |. -+++.+|.. ....+|.++++.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 7999995 88888888777653 52 256666654 111357777775
Q ss_pred CcEEEEccCCCCC------------CCHHHHHHHHccCCC-cEEEecC
Q 007301 464 PTILIGTSGQGRT------------FTKEVVEAMASLNEK-PIIFSLS 498 (609)
Q Consensus 464 PtvLIG~S~~~g~------------Ft~evv~~Ma~~~er-PIIFaLS 498 (609)
+|++|=+.+.... .+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 9999977654321 246688888766555 6777543
No 490
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=47.47 E-value=15 Score=35.54 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=24.1
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+.--++|+|||.||+-.|-.+.. .| .++.++|+.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CCcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 34468999999999887754432 35 468889874
No 491
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=47.46 E-value=63 Score=32.26 Aligned_cols=82 Identities=12% Similarity=0.197 Sum_probs=42.9
Q ss_pred HHHHHhCCCCCCceEEEe-CcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccc--
Q 007301 372 SAMKFLGGSLADQRFLFL-GAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHE-- 448 (609)
Q Consensus 372 ~Alr~~g~~L~d~rivf~-GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~-- 448 (609)
++++..+ ...++++||. |+|..|..++.+... .|. +++.+|+. ..| ++..++.=|..
T Consensus 155 ~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~Ga~~~~ 214 (349)
T 3pi7_A 155 AMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKE-----EGF-------RPIVTVRR----DEQ---IALLKDIGAAHVL 214 (349)
T ss_dssp HHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHH-----HTC-------EEEEEESC----GGG---HHHHHHHTCSEEE
T ss_pred HHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHcCCCEEE
Confidence 5566555 4445778777 778777766655543 362 58887752 111 11111110110
Q ss_pred cCCCCCHHHHHhc----cCCcEEEEccCC
Q 007301 449 HEPVKELVDAVNA----IKPTILIGTSGQ 473 (609)
Q Consensus 449 ~~~~~~L~e~V~~----vkPtvLIG~S~~ 473 (609)
.....++.+.++. -+.|++|=+++.
T Consensus 215 ~~~~~~~~~~v~~~~~~~g~D~vid~~g~ 243 (349)
T 3pi7_A 215 NEKAPDFEATLREVMKAEQPRIFLDAVTG 243 (349)
T ss_dssp ETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred ECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence 0111345555543 368999887663
No 492
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=47.24 E-value=34 Score=34.27 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=29.0
Q ss_pred HHHHHHHhCCCCCCceEEEeCc-chHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcc
Q 007301 370 LISAMKFLGGSLADQRFLFLGA-GEAGTGIAELIALEISKQTNMPLEETRKKIWLVDS 426 (609)
Q Consensus 370 ll~Alr~~g~~L~d~rivf~GA-GsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs 426 (609)
.+.+++..+ .-.+++++|.|| |..|..+++++.. .| -+++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~G-------a~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MG-------YRVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CcEEEEcC
Confidence 355565442 335689999999 7777777765543 36 26888875
No 493
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=47.17 E-value=38 Score=33.40 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=43.5
Q ss_pred CCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhc-----------c
Q 007301 379 GSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWA-----------H 447 (609)
Q Consensus 379 ~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA-----------~ 447 (609)
.+|++.++||.||+. ||...|+..+.+ .| -+++++|++- +.+......+. -
T Consensus 37 ~~l~~k~vlVTGas~---GIG~aia~~la~-~G-------~~V~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~ 98 (293)
T 3rih_A 37 FDLSARSVLVTGGTK---GIGRGIATVFAR-AG-------ANVAVAARSP-------RELSSVTAELGELGAGNVIGVRL 98 (293)
T ss_dssp TCCTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESSG-------GGGHHHHHHHTTSSSSCEEEEEC
T ss_pred cCCCCCEEEEeCCCc---HHHHHHHHHHHH-CC-------CEEEEEECCH-------HHHHHHHHHHHhhCCCcEEEEEE
Confidence 457889999999854 444445555544 36 3688888741 11222211111 1
Q ss_pred ccCCCCCHHHHHhcc-----CCcEEEEccCCC
Q 007301 448 EHEPVKELVDAVNAI-----KPTILIGTSGQG 474 (609)
Q Consensus 448 ~~~~~~~L~e~V~~v-----kPtvLIG~S~~~ 474 (609)
|.....++.++++.+ +.|+||=..+..
T Consensus 99 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 130 (293)
T 3rih_A 99 DVSDPGSCADAARTVVDAFGALDVVCANAGIF 130 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 112223455566655 789999776643
No 494
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=47.09 E-value=6.5 Score=39.96 Aligned_cols=93 Identities=9% Similarity=0.088 Sum_probs=50.9
Q ss_pred CCCceEEEeCcchHHH-HHHHHHHHHHHHhcCCCHhhhcCcEEEEcccCcccCCCccCCchhcchhccccCCCCCHHHHH
Q 007301 381 LADQRFLFLGAGEAGT-GIAELIALEISKQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKELVDAV 459 (609)
Q Consensus 381 L~d~rivf~GAGsAg~-GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~GLi~~~R~~~L~~~k~~fA~~~~~~~~L~e~V 459 (609)
.+..||.|+|+|..|. ..+..+.. ..+. +-+.++|++ .+ ......+.| ..+...++.|++
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~----~~~~------~l~av~d~~----~~---~~~~~a~~~--g~~~~~~~~~ll 85 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEA----EPLT------EVTAIASRR----WD---RAKRFTERF--GGEPVEGYPALL 85 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHH----CTTE------EEEEEEESS----HH---HHHHHHHHH--CSEEEESHHHHH
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHh----CCCe------EEEEEEcCC----HH---HHHHHHHHc--CCCCcCCHHHHh
Confidence 3457999999998876 45554432 1121 223466653 11 122222222 112236899999
Q ss_pred hccCCcEEEEccCCCCCCCHHHHHHHHccCCCcEEE
Q 007301 460 NAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIF 495 (609)
Q Consensus 460 ~~vkPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 495 (609)
+.-++|+++ +++.. .+..++++...+ ..++|+.
T Consensus 86 ~~~~~D~V~-i~tp~-~~h~~~~~~al~-aGk~Vl~ 118 (350)
T 3rc1_A 86 ERDDVDAVY-VPLPA-VLHAEWIDRALR-AGKHVLA 118 (350)
T ss_dssp TCTTCSEEE-ECCCG-GGHHHHHHHHHH-TTCEEEE
T ss_pred cCCCCCEEE-ECCCc-HHHHHHHHHHHH-CCCcEEE
Confidence 887899888 44444 456666655433 2355655
No 495
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=46.84 E-value=28 Score=34.01 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=24.2
Q ss_pred CCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 380 SLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 380 ~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+|+++++||.||++ ||...++..+.+ .|. +++++|++
T Consensus 5 ~l~gk~vlVTGas~---GIG~aia~~la~-~G~-------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASS---GIGRAAALLFAR-EGA-------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTS---HHHHHHHHHHHH-TTC-------EEEECCSC
T ss_pred CCCCCEEEEECCCc---HHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 57888999999853 444445555544 363 58888764
No 496
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=46.81 E-value=17 Score=38.38 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=25.7
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~ 36 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEAR 36 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCC
Confidence 45799999999999999988753 5 356666664
No 497
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=46.76 E-value=48 Score=31.36 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=25.2
Q ss_pred CCCCCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 378 GGSLADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 378 g~~L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
..+|++.++||.||+. ||...++..+.+ .| -+++++|++
T Consensus 9 ~~~l~~k~vlVTGas~---gIG~~ia~~l~~-~G-------~~V~~~~r~ 47 (260)
T 2zat_A 9 RKPLENKVALVTASTD---GIGLAIARRLAQ-DG-------AHVVVSSRK 47 (260)
T ss_dssp -CTTTTCEEEESSCSS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred ccCCCCCEEEEECCCc---HHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 3568889999999753 444445555544 36 368888764
No 498
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=46.72 E-value=17 Score=35.92 Aligned_cols=36 Identities=28% Similarity=0.523 Sum_probs=27.7
Q ss_pred CCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 382 ADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 382 ~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
.+.-|+|+|||+||+-.|-.+.+. +.|+ ++.++|+.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 456799999999999999888653 2353 68888875
No 499
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=46.67 E-value=14 Score=40.18 Aligned_cols=35 Identities=14% Similarity=0.128 Sum_probs=28.0
Q ss_pred CceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEcccC
Q 007301 383 DQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSKG 428 (609)
Q Consensus 383 d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~G 428 (609)
+.+|||+|||.||+..|..|.. +.|+ ++.++|+..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 4689999999999999988862 1363 689999864
No 500
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=46.60 E-value=24 Score=33.87 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=23.5
Q ss_pred CCCceEEEeCcchHHHHHHHHHHHHHHHhcCCCHhhhcCcEEEEccc
Q 007301 381 LADQRFLFLGAGEAGTGIAELIALEISKQTNMPLEETRKKIWLVDSK 427 (609)
Q Consensus 381 L~d~rivf~GAGsAg~GIA~li~~~~~~~~G~s~eeAr~~i~lvDs~ 427 (609)
+++.++||.||.. ||...++..+.+ .|. +++++|++
T Consensus 30 l~~k~vlVTGasg---gIG~~la~~l~~-~G~-------~V~~~~r~ 65 (279)
T 1xg5_A 30 WRDRLALVTGASG---GIGAAVARALVQ-QGL-------KVVGCART 65 (279)
T ss_dssp GTTCEEEEESTTS---HHHHHHHHHHHH-TTC-------EEEEEESC
T ss_pred cCCCEEEEECCCc---hHHHHHHHHHHH-CCC-------EEEEEECC
Confidence 6778999998743 444455555544 363 58888764
Done!