Query 007304
Match_columns 608
No_of_seqs 159 out of 288
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 22:24:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dkp_A Pleckstrin homology dom 98.0 8.1E-05 2.8E-09 64.6 12.1 78 99-186 40-120 (128)
2 1fgy_A GRP1; PH domain, signal 97.8 0.00012 3.9E-09 63.3 10.2 83 98-187 22-122 (127)
3 1v89_A Hypothetical protein KI 97.8 0.00011 3.9E-09 62.4 10.0 86 98-187 25-114 (118)
4 2yry_A Pleckstrin homology dom 97.8 0.00021 7.3E-09 61.5 11.8 97 63-186 22-121 (122)
5 2w2x_D 1-phosphatidylinositol- 97.8 5.8E-05 2E-09 66.9 8.4 80 98-186 29-120 (124)
6 2i5f_A Pleckstrin; PH domain, 97.8 0.00014 4.8E-09 61.3 9.9 80 98-184 24-108 (109)
7 4a6h_A Phosphatidylinositol 4, 97.7 0.00013 4.6E-09 65.3 9.8 89 98-186 23-119 (120)
8 2d9y_A Pleckstrin homology dom 97.7 0.0002 6.7E-09 61.1 10.0 81 99-189 30-113 (117)
9 1u5d_A SKAP55, SRC kinase-asso 97.7 0.00017 5.9E-09 60.2 9.5 79 98-185 24-105 (108)
10 1x05_A Pleckstrin; PH domain, 97.7 0.00016 5.6E-09 63.1 9.1 83 98-187 35-122 (129)
11 1wgq_A FYVE, rhogef and PH dom 97.6 0.00023 7.7E-09 60.5 9.5 77 99-187 26-105 (109)
12 1upq_A PEPP1; PH domain, phosp 97.6 0.00019 6.6E-09 61.9 9.1 78 99-186 30-110 (123)
13 1v88_A Oxysterol binding prote 97.6 0.00021 7.1E-09 64.6 9.2 82 99-187 25-126 (130)
14 3rcp_A Pleckstrin homology dom 97.5 0.00021 7.1E-09 60.0 7.6 73 99-186 17-94 (103)
15 1pls_A Pleckstrin homology dom 97.4 0.0005 1.7E-08 58.6 8.5 77 99-186 23-102 (113)
16 2cof_A Protein KIAA1914; PH do 97.4 0.00055 1.9E-08 58.3 8.6 76 99-187 24-103 (107)
17 1fao_A Dual adaptor of phospho 97.3 0.0011 3.7E-08 57.6 9.5 75 99-186 36-113 (126)
18 2ys3_A UNC-112-related protein 97.3 0.0011 3.7E-08 61.6 9.8 79 99-186 30-113 (137)
19 1x1g_A Pleckstrin 2; PH domain 97.3 0.00063 2.2E-08 59.2 7.9 82 99-186 36-125 (129)
20 2dn6_A KIAA0640 protein; PH do 97.3 0.0014 4.8E-08 55.6 9.6 76 98-186 25-104 (115)
21 4f7h_A Fermitin family homolog 97.2 0.0011 3.9E-08 63.4 9.1 79 99-187 68-152 (173)
22 2coc_A FYVE, rhogef and PH dom 97.2 0.001 3.5E-08 58.9 7.9 78 99-187 25-108 (112)
23 1v5u_A SBF1, SET binding facto 97.1 0.0018 6.3E-08 55.0 9.2 82 99-187 26-113 (117)
24 1btn_A Beta-spectrin; signal t 97.1 0.001 3.5E-08 55.6 7.4 73 99-183 25-106 (106)
25 1x1f_A Signal-transducing adap 97.1 0.003 1E-07 58.6 11.0 76 99-186 36-114 (149)
26 1wg7_A Dedicator of cytokinesi 97.1 0.0012 4E-08 59.3 8.0 75 99-186 42-125 (150)
27 1u5f_A SRC-associated adaptor 97.1 0.0021 7.3E-08 57.7 9.6 79 99-186 39-120 (148)
28 2rsg_A Collagen type IV alpha- 97.1 0.002 6.8E-08 53.3 8.6 70 99-184 19-93 (94)
29 2da0_A 130-kDa phosphatidylino 97.1 0.0026 8.9E-08 54.8 9.5 72 99-186 29-102 (114)
30 1wi1_A Calcium-dependent activ 97.1 0.001 3.5E-08 60.9 7.2 78 99-186 27-111 (126)
31 2lul_A Tyrosine-protein kinase 97.1 0.0023 7.8E-08 59.6 9.7 84 99-189 38-125 (164)
32 2p0d_A RHO GTPase-activating p 97.1 0.0023 7.7E-08 57.1 9.3 76 99-186 36-125 (129)
33 1eaz_A Tandem PH domain contai 97.0 0.0021 7.2E-08 55.3 8.5 80 99-188 32-114 (125)
34 2fjl_A 1-phosphatidylinositol- 97.0 0.0026 8.8E-08 59.9 9.2 59 118-185 90-148 (150)
35 3aj4_A Pleckstrin homology dom 96.9 0.0032 1.1E-07 53.4 8.6 82 99-186 23-112 (112)
36 3cxb_B Pleckstrin homology dom 96.9 0.0044 1.5E-07 53.8 9.4 79 99-187 22-103 (112)
37 2d9x_A Oxysterol binding prote 96.9 0.0021 7.3E-08 55.7 7.3 73 99-186 26-105 (120)
38 1u5e_A SRC-associated adaptor 96.8 0.0048 1.6E-07 60.0 9.6 79 98-185 127-208 (211)
39 2cod_A Centaurin-delta 1; ARF 96.7 0.0062 2.1E-07 52.0 9.1 71 99-186 27-100 (115)
40 2r09_A Cytohesin-3; autoinhibi 96.7 0.0065 2.2E-07 63.1 10.9 82 99-187 231-330 (347)
41 2dhk_A TBC1 domain family memb 96.7 0.0065 2.2E-07 52.8 8.8 71 99-184 28-103 (119)
42 2dtc_A RAL guanine nucleotide 96.6 0.0081 2.8E-07 54.8 8.9 79 99-189 26-116 (126)
43 4h8s_A DCC-interacting protein 96.5 0.0043 1.5E-07 65.2 7.9 96 62-186 300-399 (407)
44 3tfm_A Myosin X; split PH doma 96.5 0.0077 2.6E-07 58.8 9.0 74 98-186 80-156 (228)
45 2y7b_A Actin-binding protein a 96.5 0.003 1E-07 55.2 5.3 86 99-186 25-129 (134)
46 1dyn_A Dynamin; signal transdu 96.5 0.013 4.3E-07 53.7 9.5 81 99-184 32-116 (125)
47 1wjm_A Beta-spectrin III; PH d 96.4 0.0063 2.1E-07 52.8 7.1 77 99-187 34-119 (123)
48 2j59_M RHO-GTPase activating p 96.4 0.015 5.2E-07 53.2 10.1 95 99-206 31-134 (168)
49 1btk_A Bruton'S tyrosine kinas 96.4 0.0081 2.8E-07 56.3 8.0 81 99-188 26-135 (169)
50 4bbk_A Kindlin-1, fermitin fam 96.3 0.014 4.7E-07 55.6 9.3 79 99-187 47-131 (165)
51 3a8p_A T-lymphoma invasion and 96.2 0.015 5E-07 58.5 9.5 76 99-186 41-125 (263)
52 1v5p_A Pleckstrin homology dom 96.2 0.019 6.5E-07 51.4 9.0 77 99-186 34-121 (126)
53 1unq_A RAC-alpha serine/threon 96.0 0.0022 7.6E-08 55.6 2.1 83 99-187 26-112 (125)
54 2q13_A DCC-interacting protein 96.0 0.016 5.3E-07 60.5 8.8 77 98-186 298-376 (385)
55 3tca_A Amyloid beta A4 precurs 95.9 0.014 4.9E-07 57.4 7.7 86 99-186 186-277 (291)
56 1dro_A Beta-spectrin; cytoskel 95.8 0.0078 2.7E-07 52.5 4.7 75 99-185 34-119 (122)
57 3pp2_A RHO GTPase-activating p 95.8 0.044 1.5E-06 48.4 9.5 76 99-185 33-123 (124)
58 2rov_A RHO-associated protein 95.6 0.046 1.6E-06 48.5 8.8 85 98-184 21-114 (117)
59 2rlo_A Centaurin-gamma 1; spli 95.2 0.034 1.2E-06 48.8 6.5 80 99-185 24-124 (128)
60 2d9v_A Pleckstrin homology dom 94.9 0.15 5.2E-06 44.9 9.9 82 99-186 26-115 (130)
61 1qqg_A IRS-1, insulin receptor 94.9 0.068 2.3E-06 53.8 8.6 79 98-189 23-116 (264)
62 3lju_X ARF-GAP with dual PH do 94.4 0.14 4.6E-06 54.2 9.8 84 99-190 288-377 (386)
63 3lju_X ARF-GAP with dual PH do 93.9 0.11 3.7E-06 54.9 7.8 78 98-184 163-245 (386)
64 4gmv_A RAS-associated and plec 93.4 0.16 5.4E-06 52.0 7.6 86 98-187 175-268 (281)
65 3a8n_A TIAM-1, T-lymphoma inva 91.4 0.17 6E-06 51.7 5.0 75 99-185 41-124 (279)
66 2d9w_A Docking protein 2; PH d 85.6 9.9 0.00034 34.8 11.8 107 45-186 2-122 (127)
67 1zc3_B Exocyst complex protein 85.6 4.2 0.00014 35.7 9.3 74 100-186 28-108 (113)
68 3hk0_A Growth factor receptor- 83.6 2.6 8.9E-05 42.5 7.8 84 99-187 150-242 (256)
69 2l2t_A Receptor tyrosine-prote 82.0 1.1 3.6E-05 34.2 3.2 29 4-33 12-40 (44)
70 2ks1_B Epidermal growth factor 81.3 1.2 4.1E-05 33.9 3.3 29 4-33 13-41 (44)
71 2vrw_B P95VAV, VAV1, proto-onc 79.7 3.1 0.00011 43.3 7.0 82 99-187 252-337 (406)
72 3ky9_A Proto-oncogene VAV; cal 79.3 2.9 9.8E-05 46.0 6.9 81 100-187 425-509 (587)
73 2pz1_A RHO guanine nucleotide 78.8 6.8 0.00023 41.4 9.4 80 100-186 353-441 (466)
74 1dbh_A Protein (human SOS 1); 74.6 9 0.00031 38.8 8.6 75 99-185 261-349 (354)
75 2lg1_A A-kinase anchor protein 74.0 7.4 0.00025 36.9 7.3 76 99-186 88-173 (185)
76 2dfk_A Collybistin II; DH doma 73.8 8.2 0.00028 40.3 8.3 80 100-186 276-364 (402)
77 2z0q_A XPLN, RHO guanine nucle 70.8 9.9 0.00034 38.4 7.9 83 99-184 245-345 (346)
78 1txd_A RHO guanine nucleotide 66.6 11 0.00036 38.8 7.2 56 119-186 315-370 (385)
79 1xcg_A PDZ-rhogef, RHO guanine 65.9 16 0.00054 37.2 8.2 56 119-185 311-366 (368)
80 3mpx_A FYVE, rhogef and PH dom 64.6 10 0.00034 39.6 6.6 75 99-187 260-339 (434)
81 4ejn_A RAC-alpha serine/threon 63.5 4.5 0.00016 41.9 3.7 77 99-186 24-109 (446)
82 2k1k_A Ephrin type-A receptor 50.0 10 0.00035 27.8 2.6 24 5-28 13-36 (38)
83 3arc_X Photosystem II PSBX pro 42.1 28 0.00094 25.9 3.8 25 3-29 8-32 (39)
84 2dw3_A Intrinsic membrane prot 38.4 41 0.0014 28.4 4.7 36 6-44 29-64 (77)
85 3ksy_A SOS-1, SON of sevenless 36.7 82 0.0028 37.3 8.8 99 99-217 458-570 (1049)
86 3tfm_A Myosin X; split PH doma 35.6 18 0.00061 34.9 2.5 48 125-183 180-227 (228)
87 2rgn_B RHOA/RAC/CDC42 exchange 35.1 94 0.0032 31.6 8.0 78 99-186 230-319 (354)
88 2jwa_A Receptor tyrosine-prote 34.7 37 0.0013 25.8 3.6 27 5-32 14-40 (44)
89 3bz1_X Photosystem II PSBX pro 34.2 35 0.0012 26.6 3.4 24 3-28 18-41 (50)
90 3t06_A PDZ-rhogef, RHO guanine 33.6 1.2E+02 0.0042 31.1 8.7 76 99-186 312-409 (418)
91 1nty_A Triple functional domai 33.3 86 0.0029 31.1 7.2 78 99-186 223-309 (311)
92 2ypj_A Eccel5A, endoglucanase 29.4 9.7 0.00033 34.6 -0.4 27 142-176 67-93 (155)
93 4ba6_A Endoglucanase CEL5A; ca 28.1 11 0.00036 34.0 -0.4 27 142-176 48-74 (144)
94 2obd_A Cholesteryl ester trans 27.0 1E+02 0.0036 32.9 7.0 47 367-415 22-68 (476)
95 2nrg_A Intrinsic membrane prot 26.5 64 0.0022 27.5 4.0 36 6-44 30-65 (82)
96 1kz7_A Guanine nucleotide exch 24.2 1.4E+02 0.0049 30.2 7.1 78 97-187 237-327 (353)
97 2l34_A TYRO protein tyrosine k 22.9 87 0.003 22.3 3.6 23 4-26 8-30 (33)
98 1pfi_A Major coat protein of P 22.3 85 0.0029 23.7 3.6 16 5-20 22-37 (46)
99 1q90_G Cytochrome B6F complex 20.1 1.1E+02 0.0037 22.5 3.6 25 3-27 4-28 (37)
No 1
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=97.96 E-value=8.1e-05 Score=64.64 Aligned_cols=78 Identities=17% Similarity=0.284 Sum_probs=62.7
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+||++|+++.|+..... .. ..+|+|.+|.|..+.... .-.++|.+.|.+++ .+++||++||--|.+.
T Consensus 40 ~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~----~~~~~~~F~i~~~~------~r~~~l~a~s~~e~~~ 109 (128)
T 2dkp_A 40 KRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSED----HINRKYAFKAAHPN------MRTYYFCTDTGKEMEL 109 (128)
T ss_dssp EEEEEEETTEEEEESSTTCCSEEEEECGGGSEEEECCGGG----CCSSCSEEEEECSS------SCCEEEECSSHHHHHH
T ss_pred eEEEEEeCCEEEEECCCCCcccceEEEcCceEEEEcCCcc----cCCCCeEEEEEcCC------CCEEEEEcCCHHHHHH
Confidence 58999999999999753 32 579999999998876422 22456888888553 4788999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|+..
T Consensus 110 Wi~al~~a~~~ 120 (128)
T 2dkp_A 110 WMKAMLDAALV 120 (128)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHhc
Confidence 99999998875
No 2
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=97.80 E-value=0.00012 Score=63.30 Aligned_cols=83 Identities=20% Similarity=0.259 Sum_probs=64.8
Q ss_pred ceeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCc---------------ccccC
Q 007304 98 VRKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSS---------------VLYNG 159 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~---------------~iy~~ 159 (608)
-+|+++|+++.|+..... .. ..+|+|.+|.|..+... .++|.+.|..++. .+...
T Consensus 22 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~-------~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (127)
T 1fgy_A 22 KRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVLDP-------RKPNCFELYNPSHKGQVIKACKTEADGRVVEGN 94 (127)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCS-------SCSSEEEEECSSSTTCCCCCEEECTTSCEEECC
T ss_pred EEEEEEEECCEEEEeCCCCCCCcceEEECCceEEEEccCC-------CCCceEEEecCCccccccccccccCCcceecCC
Confidence 468999999999999763 22 57999999998887642 3566777765532 34455
Q ss_pred ceeEEEEeccchhHHHHHHHHHHHhccc
Q 007304 160 SKLIYIFLETSWEKEAWCKALRLASCED 187 (608)
Q Consensus 160 sk~~~~y~et~~EKEsWckaLr~as~~~ 187 (608)
.+++||++||--|.+.|..+|+.|...+
T Consensus 95 ~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 95 HVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 6799999999999999999999987653
No 3
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.80 E-value=0.00011 Score=62.38 Aligned_cols=86 Identities=22% Similarity=0.320 Sum_probs=66.3
Q ss_pred ceeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCccc-ccCceeEEEEeccchhH
Q 007304 98 VRKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVL-YNGSKLIYIFLETSWEK 173 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~i-y~~sk~~~~y~et~~EK 173 (608)
-+|+++|+++.|+.... |.. ..+|+|.+|.|..+.... +-.++|.++|.+++... ....+++||++||--|.
T Consensus 25 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~----~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~ 100 (118)
T 1v89_A 25 QQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNP----EEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEM 100 (118)
T ss_dssp EEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCCS----SCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHH
T ss_pred cEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcCc----ccCCcceEEEECCccccccCCCcEEEEECCCHHHH
Confidence 36899999999999966 322 579999999998776432 22457888888653221 13678899999999999
Q ss_pred HHHHHHHHHHhccc
Q 007304 174 EAWCKALRLASCED 187 (608)
Q Consensus 174 EsWckaLr~as~~~ 187 (608)
+.|..+|+.|....
T Consensus 101 ~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 101 EEWVKFLRRVAGSG 114 (118)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHccC
Confidence 99999999998654
No 4
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=0.00021 Score=61.46 Aligned_cols=97 Identities=23% Similarity=0.357 Sum_probs=71.4
Q ss_pred hhccceEEEeCCCCCCccccchHHHhhccceeeccceeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCcccc
Q 007304 63 YKKQGYVWVLEPEKVPKEKFSKEQKKKKEFLEVYPVRKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSR 139 (608)
Q Consensus 63 ~~~~g~~wv~~~~~~~k~k~~k~~k~~k~~~ev~p~~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~sr 139 (608)
+.++|+++.........| -+|+++|+++.|+.... |.. ..+|+|.+|.|..|....
T Consensus 22 ~~~~G~L~K~~~~~~~~W-----------------k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~---- 80 (122)
T 2yry_A 22 VTKAGWLFKQASSGVKQW-----------------NKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSD---- 80 (122)
T ss_dssp EEEEEEEEEECCSSSCCE-----------------EEEEEEEETTEEEEESSTTCCSCCEEEESTTCCCEECCTTC----
T ss_pred ccEEEEEEEECCCCCCCc-----------------EEEEEEEeCCEEEEECCCCCCCcccEEEcCCCEEEEcCccc----
Confidence 568898886543222113 25899999999999865 333 579999999987775422
Q ss_pred ccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 140 KWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 140 KwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
.-.++|.+.|.++ +.+++||.+||--|.+.|..+|+.|+..
T Consensus 81 ~~~~~~~F~i~~~------~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 81 NISRKHTFKAEHA------GVRTYFFSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp SCSSSSEEEEECS------SSCEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred cCCcccEEEEecC------CCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2345678888633 4578899999999999999999999753
No 5
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.80 E-value=5.8e-05 Score=66.95 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=63.2
Q ss_pred ceeeeEeeCceEEEecCC------------CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEE
Q 007304 98 VRKYAKIKHRALILTSTD------------GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYI 165 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~d------------g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~ 165 (608)
-+|+++|+++.|+..+.. .....|+|.||.|..+.. .+-.|+|..+|.++.. +..++||
T Consensus 29 k~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~~~~-----~~~~k~~~F~I~~~~~----~~~~~~~ 99 (124)
T 2w2x_D 29 TRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVKAPQ-----GKNQKSFVFILEPKQQ----GDPPVEF 99 (124)
T ss_dssp EEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEECTT-----CBTTBSEEEEEEECC------CCCEEE
T ss_pred eEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEEccC-----CcCCCCEEEEEECCCC----CCceEEE
Confidence 468999999999999751 115799999999887643 3456788999986642 3567899
Q ss_pred EeccchhHHHHHHHHHHHhcc
Q 007304 166 FLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 166 y~et~~EKEsWckaLr~as~~ 186 (608)
.++|.=|.+.|.+|||.|+..
T Consensus 100 ~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 100 ATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp EECCCHHHHHHHHHHHHHHC-
T ss_pred EECCHHHHHHHHHHHHHHHHh
Confidence 999999999999999998765
No 6
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=97.76 E-value=0.00014 Score=61.26 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=59.6
Q ss_pred ceeeeEeeCc--eEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 98 VRKYAKIKHR--ALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 98 ~~~~~~lk~~--~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
-+|+++|+++ .|+.... |.. ..+|+|.+|.|..|.... ..++..+.|.+.|..+ +.+++||.++|--|
T Consensus 24 k~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~-~~~~~~~~~~F~i~~~------~~~~~~l~a~s~~e 96 (109)
T 2i5f_A 24 KVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNS-NGRKSEEENLFEIITA------DEVHYFLQAATPKE 96 (109)
T ss_dssp EEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC---------CCSEEEEECT------TCCEEEEECSSHHH
T ss_pred eEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCc-ccccCCCceEEEEEeC------CCCEEEEEcCCHHH
Confidence 4689999987 8888855 332 679999999998886532 1234557788888855 34568999999999
Q ss_pred HHHHHHHHHHHh
Q 007304 173 KEAWCKALRLAS 184 (608)
Q Consensus 173 KEsWckaLr~as 184 (608)
.+.|..||+.|+
T Consensus 97 ~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 97 RTEWIKAIQMAS 108 (109)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999986
No 7
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=97.73 E-value=0.00013 Score=65.26 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=63.8
Q ss_pred ceeeeEeeCceEEEecC-C----C-CeeEEecCCcEEEEEeCCCcc-ccc-cccccCeeEecCCcccccCceeEEEEecc
Q 007304 98 VRKYAKIKHRALILTST-D----G-SQTSFPLKGCEIKAVSASSLS-SRK-WAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~-d----g-~~~~i~l~~C~v~avs~s~~~-srK-waKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
-+++.+|+++.|+-+.. | - ....|.|.||.|.+++..... +.+ =.+.+...|..+...+..++..++|.++|
T Consensus 23 ~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s 102 (120)
T 4a6h_A 23 SKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADS 102 (120)
T ss_dssp EEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSS
T ss_pred ccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCC
Confidence 36899999999998844 2 1 368999999999998763210 000 01334445555554566778899999999
Q ss_pred chhHHHHHHHHHHHhcc
Q 007304 170 SWEKEAWCKALRLASCE 186 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~ 186 (608)
--|.|.|-+|+|.|++.
T Consensus 103 ~~e~~~Wv~aI~~~~~~ 119 (120)
T 4a6h_A 103 YESMMSWFDNLKILTST 119 (120)
T ss_dssp HHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999864
No 8
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.71 E-value=0.0002 Score=61.12 Aligned_cols=81 Identities=23% Similarity=0.377 Sum_probs=63.0
Q ss_pred eeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+||++|+++.|+.... |.. ..+|+|.+|.|..|.... .-.++|.+.|.++ +.+++||++||--|.+.
T Consensus 30 ~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~----~~~~~~~F~i~~~------~~r~~~l~a~s~~e~~~ 99 (117)
T 2d9y_A 30 KRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSD----NISRKHTFKAEHA------GVRTYFFSAESPEEQEA 99 (117)
T ss_dssp EEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTTT----TCCCSSEEEEECS------SSCEEEEECSSHHHHHH
T ss_pred EEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCccc----cCCCccEEEEEcC------CCcEEEEEcCCHHHHHH
Confidence 5899999999999965 322 579999999987775422 2345677777533 45789999999999999
Q ss_pred HHHHHHHHhccccc
Q 007304 176 WCKALRLASCEDKK 189 (608)
Q Consensus 176 WckaLr~as~~~k~ 189 (608)
|..+|+.|......
T Consensus 100 Wi~al~~~~~~~~~ 113 (117)
T 2d9y_A 100 WIQAMGEAARVQSG 113 (117)
T ss_dssp HHHHHHHTTCCTTC
T ss_pred HHHHHHHHHhhccC
Confidence 99999999876443
No 9
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=97.71 E-value=0.00017 Score=60.17 Aligned_cols=79 Identities=9% Similarity=0.206 Sum_probs=61.2
Q ss_pred ceeeeEeeCceEEEecCCC--C-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 98 VRKYAKIKHRALILTSTDG--S-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
-+|+++|+++.|+...... . ...|+|.+|.|..+.... ..-.+.|.+.|.+++ .+++||+++|--|.+
T Consensus 24 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~---~~~~~~~~F~i~~~~------~r~~~l~a~s~~e~~ 94 (108)
T 1u5d_A 24 QKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYSVRMAPHLR---RDSKKESCFELTSQD------RRTYEFTATSPAEAR 94 (108)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGGC---SSGGGGGEEEEECSS------SCCEEEECSSHHHHH
T ss_pred eeeEEEEeCCEEEEecCCCCCCCCEEEEecceEEEeCCccc---cccCCcceEEEEcCC------CcEEEEECCCHHHHH
Confidence 3689999999999987633 2 579999999987764311 122356888887543 478899999999999
Q ss_pred HHHHHHHHHhc
Q 007304 175 AWCKALRLASC 185 (608)
Q Consensus 175 sWckaLr~as~ 185 (608)
.|..+|+.|..
T Consensus 95 ~Wi~ai~~~i~ 105 (108)
T 1u5d_A 95 DWVDQISFLLK 105 (108)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 10
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=97.66 E-value=0.00016 Score=63.06 Aligned_cols=83 Identities=18% Similarity=0.276 Sum_probs=64.6
Q ss_pred ceeeeEeeCc--eEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 98 VRKYAKIKHR--ALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 98 ~~~~~~lk~~--~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
-+|+++|+++ .|+.... |.. ..+|+|.+|.|..|.... ..++..+.|.+.|..+. .+++||++||--|
T Consensus 35 k~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~-~~~~~~~~~~F~i~~~~------~~~~~l~a~s~~e 107 (129)
T 1x05_A 35 KVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNS-NGRKSEEENLFEIITAD------EVHYFLQAATPKE 107 (129)
T ss_dssp EEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCC-CSSSCSSCSEEEEECTT------CCCCEEECSSHHH
T ss_pred eeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCc-cccccCCCeEEEEEcCC------CCEEEEECCCHHH
Confidence 3589999986 7888855 333 679999999998876532 13456688899998653 3567999999999
Q ss_pred HHHHHHHHHHHhccc
Q 007304 173 KEAWCKALRLASCED 187 (608)
Q Consensus 173 KEsWckaLr~as~~~ 187 (608)
.+.|..||+.|...-
T Consensus 108 ~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 108 RTEWIKAIQMASRTG 122 (129)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHcc
Confidence 999999999998753
No 11
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.65 E-value=0.00023 Score=60.54 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=60.9
Q ss_pred eeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+.... |.. ..+|+|.+|.+..+.... .++|.++|.++ +.+++||.+||--|.+.
T Consensus 26 ~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~------~~~~~F~i~~~------~~~~~~~~a~s~~e~~~ 93 (109)
T 1wgq_A 26 HLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDEN------SESKVFQLLHK------GMVFYVFKADDAHSTQR 93 (109)
T ss_dssp EEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSS------CSSSEEEEEET------TEEEEEEECSSHHHHHH
T ss_pred eEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCC------CCCcEEEEEeC------CCeEEEEECCCHHHHHH
Confidence 5899999999999876 333 689999999998765311 23577888743 34679999999999999
Q ss_pred HHHHHHHHhccc
Q 007304 176 WCKALRLASCED 187 (608)
Q Consensus 176 WckaLr~as~~~ 187 (608)
|..+|+.|+...
T Consensus 94 Wi~al~~a~~~~ 105 (109)
T 1wgq_A 94 WIDAFQEGTVSG 105 (109)
T ss_dssp HHHHHHHHHSCC
T ss_pred HHHHHHHHhccC
Confidence 999999998653
No 12
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=97.64 E-value=0.00019 Score=61.85 Aligned_cols=78 Identities=21% Similarity=0.279 Sum_probs=62.5
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+....+ .. ..+|+|.+|.|..+... .+-.++|.|.|.++ +.+++||++||--|.+.
T Consensus 30 kR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~v~~~~~~----~~~~~~~~f~i~~~------~~r~~~l~a~s~~e~~~ 99 (123)
T 1upq_A 30 RRWFVLSGHCLFYYKDSREESVLGSVLLPSYNIRPDGPG----APRGRRFTFTAEHP------GMRTYVLAADTLEDLRG 99 (123)
T ss_dssp EEEEEEETTEEEEESSTTCCSCCEEEEGGGCEEEECCSS----CTTSSSSEEEEECT------TSCCEEEECSSHHHHHH
T ss_pred eEEEEEeCCEEEEECCCCCcccceEEECCCCEEEECCCC----ccCCCcEEEEEECC------CCeEEEEECCCHHHHHH
Confidence 58999999999998653 22 57999999998877542 23346788998754 35788999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|+..
T Consensus 100 Wi~al~~a~~~ 110 (123)
T 1upq_A 100 WLRALGRASRA 110 (123)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999999876
No 13
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.61 E-value=0.00021 Score=64.65 Aligned_cols=82 Identities=23% Similarity=0.359 Sum_probs=61.1
Q ss_pred eeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCccc-c-----cC----------
Q 007304 99 RKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVL-Y-----NG---------- 159 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~i-y-----~~---------- 159 (608)
+|+++|+++.|+.... |.. ..+|+|.||+|.-. +++ .++|.++|.++...- . .+
T Consensus 25 rRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~v~~~-----~~~--~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~ 97 (130)
T 1v88_A 25 KLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIER-----PSK--KDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPL 97 (130)
T ss_dssp EEEEEEETTEEEEESCSSSCCCCEEEECSSCEECCC-----CTT--TSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCC
T ss_pred EEEEEEECCEEEEECCCCCCCceEEEEcCCCEEEEC-----CCC--CCCeEEEEEcCCccccccccCCcccccccccccC
Confidence 4899999999999866 333 67999999998322 333 246999999875322 1 11
Q ss_pred -ceeEEEEeccchhHHHHHHHHHHHhccc
Q 007304 160 -SKLIYIFLETSWEKEAWCKALRLASCED 187 (608)
Q Consensus 160 -sk~~~~y~et~~EKEsWckaLr~as~~~ 187 (608)
...+||.+||--|.+.|-+||+.|...+
T Consensus 98 ~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 98 PSSYLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp CSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred CceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 2347899999999999999999998653
No 14
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=97.54 E-value=0.00021 Score=60.05 Aligned_cols=73 Identities=21% Similarity=0.307 Sum_probs=58.0
Q ss_pred eeeeEeeCceEEEecCCC-----CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 99 RKYAKIKHRALILTSTDG-----SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg-----~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
+|+++|+++.|+...... ...+|+|.+|.|..... +.+...|.. .+.+++||+++|.-|.
T Consensus 17 ~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~~~v~~~~~---------~~~~F~i~~------~~~r~~~l~a~s~~e~ 81 (103)
T 3rcp_A 17 PRWFVLDNGILSYYDSQDDVCKGSKGSIKMAVCEIKVHSA---------DNTRMELII------PGEQHFYMKAVNAAER 81 (103)
T ss_dssp EEEEEEETTEEEEESSCC---CCCSCEEEGGGCEEECCTT---------CSSEEEEEE------TTTEEEEEECSSHHHH
T ss_pred ceEEEEECCEEEEEecCCcccCCcccEEEeeeeEEEEcCC---------CCceEEEEe------CCCCEEEEECCCHHHH
Confidence 579999999999987633 46799999999876432 244555553 3568999999999999
Q ss_pred HHHHHHHHHHhcc
Q 007304 174 EAWCKALRLASCE 186 (608)
Q Consensus 174 EsWckaLr~as~~ 186 (608)
+.|..+|+.|...
T Consensus 82 ~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 82 QRWLVALGSSKAS 94 (103)
T ss_dssp HHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999765
No 15
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.41 E-value=0.0005 Score=58.61 Aligned_cols=77 Identities=14% Similarity=0.208 Sum_probs=60.0
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+..... .. ..+|+|.+|.+..+... . -.+.|.+.|..+ +.+++||+++|--|.+.
T Consensus 23 ~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~---~--~~~~~~F~i~~~------~~r~~~l~a~s~~e~~~ 91 (113)
T 1pls_A 23 PMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQD---F--GKRMFVFKITTT------KQQDHFFQAAFLEERDA 91 (113)
T ss_dssp EEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSCCS---S--CCSSSEEEEEET------TTEEEEEECSSHHHHHH
T ss_pred EEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEecCC---C--CCCccEEEEEcC------CCCEEEEECCCHHHHHH
Confidence 58999999999998763 22 57999999998753221 1 125677888743 35789999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|...
T Consensus 92 Wi~ai~~~~~~ 102 (113)
T 1pls_A 92 WVRDINKAIKC 102 (113)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998765
No 16
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.39 E-value=0.00055 Score=58.33 Aligned_cols=76 Identities=18% Similarity=0.335 Sum_probs=59.2
Q ss_pred eeeeEeeCceEEEecCCC--C--eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 99 RKYAKIKHRALILTSTDG--S--QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg--~--~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
+|+++|+++.|+.....+ . ...|.|.+|.|..+.. + .++|.+.|..+ +.+++||.++|.-|.+
T Consensus 24 ~RwfvL~~~~L~yyk~~~~~~~~~~~i~l~~~~v~~~~~---~----~~~~~F~i~~~------~~r~~~l~A~s~~e~~ 90 (107)
T 2cof_A 24 SRWCSVRDNHLHFYQDRNRSKVAQQPLSLVGCEVVPDPS---P----DHLYSFRILHK------GEELAKLEAKSSEEMG 90 (107)
T ss_dssp EEEEEECSSCEEEECSSTTCSEEEEEECTTTCEEECCCB---T----TBSCEEEEEET------TEEEEEEECSSHHHHH
T ss_pred eEEEEEECCEEEEEeCCcccCCCeeEEeccceEEEECCC---C----CCCeEEEEEeC------CCeEEEEEcCCHHHHH
Confidence 589999999998886532 2 4578999998875443 1 35677887753 3678999999999999
Q ss_pred HHHHHHHHHhccc
Q 007304 175 AWCKALRLASCED 187 (608)
Q Consensus 175 sWckaLr~as~~~ 187 (608)
.|..||+.|....
T Consensus 91 ~Wi~al~~~~~~~ 103 (107)
T 2cof_A 91 HWLGLLLSESGSG 103 (107)
T ss_dssp HHHHHHHHHSSCS
T ss_pred HHHHHHHHHHcCC
Confidence 9999999887654
No 17
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=97.30 E-value=0.0011 Score=57.61 Aligned_cols=75 Identities=15% Similarity=0.191 Sum_probs=59.1
Q ss_pred eeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+||++|+++.|+.... |.. ...|+|.+|.+..+..+ -.++|.+.|..+ .+++||+++|--|.+.
T Consensus 36 ~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~------~~~~~~F~i~~~-------~r~~~l~a~s~~e~~~ 102 (126)
T 1fao_A 36 TRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYS------QERVNCFCLVFP-------FRTFYLCAKTGVEADE 102 (126)
T ss_dssp EEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECS------SSSSSEEEEEET-------TEEEEEECSSHHHHHH
T ss_pred cEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEeccc------CCCCCEEEEEeC-------CcEEEEECCCHHHHHH
Confidence 5899999999999865 332 67999999996555431 134567777643 5789999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|-..
T Consensus 103 Wi~al~~~i~~ 113 (126)
T 1fao_A 103 WIKILRWKLSQ 113 (126)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 99999988766
No 18
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.29 E-value=0.0011 Score=61.63 Aligned_cols=79 Identities=27% Similarity=0.393 Sum_probs=63.5
Q ss_pred eeeeEeeCceEEEe-cC-C---CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 99 RKYAKIKHRALILT-ST-D---GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 99 ~~~~~lk~~~L~l~-~~-d---g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
+++++++|..|++. +. | .+...|.|+||+|.---+ .. .++|.||++-|.. .|....||-.||-=+=
T Consensus 30 rrWFvlk~~~L~YyK~kee~~~ePig~I~L~gceV~pd~~--~~----~~kf~ikl~iPs~---~g~r~y~l~cdsEeqy 100 (137)
T 2ys3_A 30 QHWVVFKETTLSYYKSQDEAPGDPIQQLNLKGCEVVPDVN--VS----GQKFCIKLLVPSP---EGMSEIYLRCQDEQQY 100 (137)
T ss_dssp CCEEEECSSCEEEESSTTTTTSCCSCCBCTTTCEEEECCB--GG----GTBEEEEEEEECS---SSEEEEEEEESSHHHH
T ss_pred eEEEEEeCCEEEEECCchhccCCCceEEECCCCEEecccc--cc----CCceEEEEEccCC---CCceEEEEECCCHHHH
Confidence 46799999999999 33 3 246799999999654321 11 5689999998853 3788999999999999
Q ss_pred HHHHHHHHHHhcc
Q 007304 174 EAWCKALRLASCE 186 (608)
Q Consensus 174 EsWckaLr~as~~ 186 (608)
+.|-.|||+||..
T Consensus 101 ~~WMaA~rlAskg 113 (137)
T 2ys3_A 101 ARWMAGCRLASKG 113 (137)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHhccC
Confidence 9999999999977
No 19
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.29 E-value=0.00063 Score=59.18 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=62.6
Q ss_pred eeeeEee--CceEEEecCC---CC-eeEEecCCcEEEEEeCCCcccc-ccc-cccCeeEecCCcccccCceeEEEEeccc
Q 007304 99 RKYAKIK--HRALILTSTD---GS-QTSFPLKGCEIKAVSASSLSSR-KWA-KRFPIKVENKSSVLYNGSKLIYIFLETS 170 (608)
Q Consensus 99 ~~~~~lk--~~~L~l~~~d---g~-~~~i~l~~C~v~avs~s~~~sr-Kwa-KkfpIkve~~~~~iy~~sk~~~~y~et~ 170 (608)
+|+++|+ ++.|+..... .. ...|+|.+|.|..|.....|.. |.. +.|.+.|..++ .+++||++||-
T Consensus 36 ~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~------~r~~~l~a~s~ 109 (129)
T 1x1g_A 36 VRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKD------DTHYYIQASSK 109 (129)
T ss_dssp EEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTT------CCCEEECCSSH
T ss_pred eEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCC------CCEEEEEcCCH
Confidence 5899999 3688888762 22 5799999999998876533432 322 57888888553 35689999999
Q ss_pred hhHHHHHHHHHHHhcc
Q 007304 171 WEKEAWCKALRLASCE 186 (608)
Q Consensus 171 ~EKEsWckaLr~as~~ 186 (608)
-|.+.|..+|+.|...
T Consensus 110 ~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 110 AERAEWIEAIKKLTSG 125 (129)
T ss_dssp HHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999754
No 20
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.26 E-value=0.0014 Score=55.58 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=58.2
Q ss_pred ceeeeEeeCceEEEecC--CCC-eeEEecCCc-EEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 98 VRKYAKIKHRALILTST--DGS-QTSFPLKGC-EIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C-~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
-+|+++|+++.|+.... |.. ..+|+|.+| .|..+.... .++|.+.|..+ .+++||++||--|.
T Consensus 25 k~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~------~~~~~F~i~~~-------~r~~~l~a~s~~e~ 91 (115)
T 2dn6_A 25 TERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDKD------GKKCLFLVKCF-------DKTFEISASDKKKK 91 (115)
T ss_dssp EEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCCT------TCCSEEEEECS-------SCEEEEECSSHHHH
T ss_pred EEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCCC------CCeeEEEEEeC-------CCEEEEEcCCHHHH
Confidence 35899999999999876 333 579999985 566654321 24567777643 47799999999999
Q ss_pred HHHHHHHHHHhcc
Q 007304 174 EAWCKALRLASCE 186 (608)
Q Consensus 174 EsWckaLr~as~~ 186 (608)
+.|..+|+.|...
T Consensus 92 ~~Wi~ai~~~~~~ 104 (115)
T 2dn6_A 92 QEWIQAIHSTIHL 104 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 21
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=97.19 E-value=0.0011 Score=63.40 Aligned_cols=79 Identities=24% Similarity=0.441 Sum_probs=65.1
Q ss_pred eeeeEeeCceEEEecC--C--CC-eeEEecCCcEEEE-EeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIKHRALILTST--D--GS-QTSFPLKGCEIKA-VSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--d--g~-~~~i~l~~C~v~a-vs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
+++.++||..|....+ | |. ...|.|.||+|.- |+-+ +.||.||++-|.. .|..-+||=.||-=+
T Consensus 68 ryWFv~kd~~LsyYKskEe~~geP~~~I~LrGCEVtpDVnva-------~~Kf~IkL~vP~~---~gm~e~~Lrcd~E~q 137 (173)
T 4f7h_A 68 QYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNIS-------GQKFNIKLLIPVA---EGMNEIWLRCDNEKQ 137 (173)
T ss_dssp EEEEEEETTEEEEESCGGGCSSCCSEEEECTTCEEEEEEETT-------TTEEEEEEEEEET---TEEEEEEEEESSHHH
T ss_pred eEEEEEeCCEEEEEcCHhHhcCCCceEEecCceEEecccccc-------ccceeEEEeccCC---CCcceeeeecCCHHH
Confidence 4789999999999977 4 43 6899999999984 5442 3689999997643 377888999999999
Q ss_pred HHHHHHHHHHHhccc
Q 007304 173 KEAWCKALRLASCED 187 (608)
Q Consensus 173 KEsWckaLr~as~~~ 187 (608)
=.-|-.|+|+||..+
T Consensus 138 ya~WMAAcrLAskGk 152 (173)
T 4f7h_A 138 YAHWMAACRLASKGK 152 (173)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhhccCC
Confidence 999999999999883
No 22
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.16 E-value=0.001 Score=58.94 Aligned_cols=78 Identities=18% Similarity=0.318 Sum_probs=61.0
Q ss_pred eeeeEeeCc---eEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIKHR---ALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk~~---~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
++.++|+++ .|+.... |.. +..|+|.||+|..+.. ..+-.|+|-.+|.++ .+++||=+|+--|
T Consensus 25 krWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~~V~~~~~----~~~~~~~~~Fki~~~-------~~~y~f~A~s~e~ 93 (112)
T 2coc_A 25 EVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSCKLSVPDP----EERLDSGHVWKLQWA-------KQSWYLSASSAEL 93 (112)
T ss_dssp EEEEECCTTCTTCEEEECCTTCSSSCSEECGGGCEEECCCS----SSCCSSSEEEEEEET-------TEEEEEEESSHHH
T ss_pred EEEEEEECCCccEEEEECCCCccCcceEEEcCCCEEEecCc----ccccCCCCEEEEecC-------CeEEEEEcCCHHH
Confidence 357999985 6887533 544 7899999999987433 334457888888854 4678899999999
Q ss_pred HHHHHHHHHHHhccc
Q 007304 173 KEAWCKALRLASCED 187 (608)
Q Consensus 173 KEsWckaLr~as~~~ 187 (608)
.+.|-++|+.|+...
T Consensus 94 ~~~Wl~al~~A~~~~ 108 (112)
T 2coc_A 94 QQQWLETLSTAAHSG 108 (112)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998863
No 23
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.15 E-value=0.0018 Score=55.01 Aligned_cols=82 Identities=7% Similarity=0.124 Sum_probs=61.5
Q ss_pred eeeeEee--CceEEEecCCC--C-eeEEecCCcEEEEEeCCCcc-ccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIK--HRALILTSTDG--S-QTSFPLKGCEIKAVSASSLS-SRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk--~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~~-srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
+|+++|+ ++.|+.....+ . ..+|.|.+|.+..+...... ...-.++|.+.|.. ..+++||++||--|
T Consensus 26 ~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~-------~~r~~~l~a~s~~e 98 (117)
T 1v5u_A 26 ARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKT-------TRRVYNFCAQDVPS 98 (117)
T ss_dssp EEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEE-------SSCEEEEECSSHHH
T ss_pred eeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCccccccccCCCCeEEEEEC-------CCceEEEECCCHHH
Confidence 4899999 88999987633 2 57999999998765432111 12245668888863 45789999999999
Q ss_pred HHHHHHHHHHHhccc
Q 007304 173 KEAWCKALRLASCED 187 (608)
Q Consensus 173 KEsWckaLr~as~~~ 187 (608)
.+.|..+|+.|....
T Consensus 99 ~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 99 AQQWVDRIQSCLSSG 113 (117)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhccC
Confidence 999999999987653
No 24
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=97.14 E-value=0.001 Score=55.60 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=56.1
Q ss_pred eeeeEeeCceEEEecCCC---------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHRALILTSTDG---------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg---------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+++++|+++.|+....+. ....|.|.+|.|...... . .++|.+.|..+ ..+++||.+||
T Consensus 25 ~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~--~----~~~~~F~i~~~------~~~~~~~~A~s 92 (106)
T 1btn_A 25 NVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDY--K----KKKHVFKLRLS------DGNEYLFQAKD 92 (106)
T ss_dssp EEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEECSSC--C----SSSSEEEEECT------TSCEEEEECSS
T ss_pred EEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEcccc--c----CCccEEEEEec------CCCEEEEECCC
Confidence 689999999999986632 245799999987654321 1 34677777733 34789999999
Q ss_pred chhHHHHHHHHHHH
Q 007304 170 SWEKEAWCKALRLA 183 (608)
Q Consensus 170 ~~EKEsWckaLr~a 183 (608)
.-|.+.|-.||+.|
T Consensus 93 ~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 93 DEEMNTWIQAISSA 106 (106)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999986
No 25
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.12 E-value=0.003 Score=58.63 Aligned_cols=76 Identities=8% Similarity=0.065 Sum_probs=57.9
Q ss_pred eeeeEeeCceEEEecCCC--C-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTDG--S-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+...... . ...|+|.+|++..+-. +..+ +.|..+|..+ .+.+||.+||--|.+.
T Consensus 36 rRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~---~~~~--~~~~F~I~t~-------~r~~~f~A~s~ee~~e 103 (149)
T 1x1f_A 36 HYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQN---STEK--NCAKFTLVLP-------KEEVQLKTENTESGEE 103 (149)
T ss_dssp EEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECC---CTTS--CCCEEEEECS-------SCCEEEECSSHHHHHH
T ss_pred eEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeecc---CCCC--cCcEEEEEcC-------CCEEEEEcCCHHHHHH
Confidence 489999999999987633 2 4799999999876543 2122 3456666644 4568899999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|-+||+.++..
T Consensus 104 Wi~aI~~v~~~ 114 (149)
T 1x1f_A 104 WRGFILTVTEL 114 (149)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHcc
Confidence 99999988764
No 26
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.11 E-value=0.0012 Score=59.30 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=58.6
Q ss_pred eeeeEeeCc-----eEEEecCCC----CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHR-----ALILTSTDG----SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~-----~L~l~~~dg----~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+|+++|++. .|....... ...+|.|.+|.+..+.. -.++|.+.|..++ .+++||+++|
T Consensus 42 ~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~~~-------~~~~~~F~i~~~~------~r~~~l~A~s 108 (150)
T 1wg7_A 42 RRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQNN-------KVRRFAFELKMQD------KSSYLLAADS 108 (150)
T ss_dssp EEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECCCC-------SSCTTEEEEECSS------SCEEEEECSS
T ss_pred EEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEecCC-------CCCceEEEEEeCC------CcEEEEEeCC
Confidence 589999995 777665433 36799999999886532 2457888888553 3789999999
Q ss_pred chhHHHHHHHHHHHhcc
Q 007304 170 SWEKEAWCKALRLASCE 186 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~ 186 (608)
--|.+.|..+|+.|...
T Consensus 109 ~~e~~~Wi~al~~ai~~ 125 (150)
T 1wg7_A 109 EVEMEEWITILNKILQL 125 (150)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998654
No 27
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=97.10 E-value=0.0021 Score=57.72 Aligned_cols=79 Identities=9% Similarity=0.273 Sum_probs=59.9
Q ss_pred eeeeEeeCceEEEecCCC--C-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTDG--S-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+...... . ..+|.|.+|.|..+..... .. .+.|.+.|..+ +.+++||.++|--|.+.
T Consensus 39 kR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~-~~--~~~~~F~I~~~------~~r~~~l~a~s~~e~~~ 109 (148)
T 1u5f_A 39 KRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTLRK-DG--KKDCCFEICAP------DKRIYQFTAASPKDAEE 109 (148)
T ss_dssp EEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECTTSCS-ST--TGGGEEEEECT------TSCEEEEECSSHHHHHH
T ss_pred eEEEEEECCEEEEEcCCCCcccceEEEcCCcEEEECCCccc-CC--CCccEEEEECC------CCcEEEEECCCHHHHHH
Confidence 589999999999987632 2 5799999999876543211 11 23477888754 34789999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|...
T Consensus 110 Wi~al~~~i~~ 120 (148)
T 1u5f_A 110 WVQQLKFILQD 120 (148)
T ss_dssp HHHHHHHHCC-
T ss_pred HHHHHHHHHHH
Confidence 99999999765
No 28
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=97.09 E-value=0.002 Score=53.32 Aligned_cols=70 Identities=14% Similarity=0.269 Sum_probs=53.5
Q ss_pred eeeeEeeCceEEEecC--C---CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 99 RKYAKIKHRALILTST--D---GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--d---g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
+|+++|+++.|..... | +....|+|.+|.|..-.. ..+.+.+.. +.+++||.+||--|.
T Consensus 19 kR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~~~~~---------~~~~F~i~~-------~~r~~~l~A~s~~e~ 82 (94)
T 2rsg_A 19 DRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDF---------DECRFDISV-------NDSVWYLRAQDPDHR 82 (94)
T ss_dssp EEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEEECSS---------CSSEEEEEE-------TTEEEEEECCSSCCT
T ss_pred EEEEEEECCEEEEEEecccccccceeeEecceeeeecCcc---------cceeEEEEe-------CCeEEEEECCCHHHH
Confidence 4899999999998754 2 235789999998764321 234555554 357889999999999
Q ss_pred HHHHHHHHHHh
Q 007304 174 EAWCKALRLAS 184 (608)
Q Consensus 174 EsWckaLr~as 184 (608)
+.|..||+.|-
T Consensus 83 ~~Wi~aLq~Ak 93 (94)
T 2rsg_A 83 QQWIDAIEQHK 93 (94)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhc
Confidence 99999999885
No 29
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.07 E-value=0.0026 Score=54.81 Aligned_cols=72 Identities=15% Similarity=0.264 Sum_probs=56.4
Q ss_pred eeeeEeeCceEEEecCCC--CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHH
Q 007304 99 RKYAKIKHRALILTSTDG--SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAW 176 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg--~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsW 176 (608)
+|+++|+++.|+....+. ....|.|.+|.|..+ +. ++|.+.|.. ..+++||++||.-|.+.|
T Consensus 29 kR~fvL~~~~L~yyk~~~~~~~~~i~l~~~~v~~~-----~~----~~~~F~I~~-------~~r~~~l~a~s~~e~~~W 92 (114)
T 2da0_A 29 RRKCSVKNGILTISHATSNRQPAKLNLLTCQVKPN-----AE----DKKSFDLIS-------HNRTYHFQAEDEQDYVAW 92 (114)
T ss_dssp EEEEEEETTEEEECCSSCCSCCEEEETTTSEEEEC-----SS----SSSCEEEEE-------TTEEEEEECSSHHHHHHH
T ss_pred eEEEEEeCCEEEEEcCCCCCCCCEEEeeeeEEEEC-----CC----CCCEEEEEc-------CCcEEEEEcCCHHHHHHH
Confidence 589999999999987633 346889999987622 22 457777773 357899999999999999
Q ss_pred HHHHHHHhcc
Q 007304 177 CKALRLASCE 186 (608)
Q Consensus 177 ckaLr~as~~ 186 (608)
..||+.|...
T Consensus 93 i~al~~~~~~ 102 (114)
T 2da0_A 93 ISVLTNSKEE 102 (114)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999977543
No 30
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.07 E-value=0.001 Score=60.88 Aligned_cols=78 Identities=9% Similarity=0.145 Sum_probs=61.3
Q ss_pred eeeeEeeCceEEEec-----C-C-CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccch
Q 007304 99 RKYAKIKHRALILTS-----T-D-GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSW 171 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~-----~-d-g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~ 171 (608)
||+-+|++++|+.+. . + -..+.|+|+||.|..+.... .. =.+||-.++.++. +.+||.+|+-=
T Consensus 27 rRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~--~~-~~~k~~F~~v~~~-------~ty~~~Adsee 96 (126)
T 1wi1_A 27 KRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQP--GL-EGGRAFFNAVKEG-------DTVIFASDDEQ 96 (126)
T ss_dssp EEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCS--SC-CSCSSEEEEECSS-------CEEEEECSSHH
T ss_pred eEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCc--cc-ccCceEEEEecCC-------ceEEEEcCCHH
Confidence 589999999999985 2 3 23689999999999884422 11 1577888887543 45899999999
Q ss_pred hHHHHHHHHHHHhcc
Q 007304 172 EKEAWCKALRLASCE 186 (608)
Q Consensus 172 EKEsWckaLr~as~~ 186 (608)
|.|.|-+||+.|+-.
T Consensus 97 e~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 97 DRILWVQAMYRATGQ 111 (126)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999865
No 31
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=97.07 E-value=0.0023 Score=59.56 Aligned_cols=84 Identities=11% Similarity=0.240 Sum_probs=66.2
Q ss_pred eeeeEeeCceEEEecCCCC----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 99 RKYAKIKHRALILTSTDGS----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
+|+.+|+++.|.-...++. ..+|.|.+|.++.+-...........+|...|.+++ +++||+++|--|.+
T Consensus 38 kRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~-------rt~~l~A~s~~e~~ 110 (164)
T 2lul_A 38 ERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDA-------NTLYIFAPSPQSRD 110 (164)
T ss_dssp EEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSS-------CEEEEECSSHHHHH
T ss_pred eEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCcccccceeEEEecCC-------cEEEEECCCHHHHH
Confidence 5899999999998866432 358999998766554444455667778888888665 57899999999999
Q ss_pred HHHHHHHHHhccccc
Q 007304 175 AWCKALRLASCEDKK 189 (608)
Q Consensus 175 sWckaLr~as~~~k~ 189 (608)
.|-+|||.+...++.
T Consensus 111 ~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 111 LWVKKLKEEIKNNNN 125 (164)
T ss_dssp HHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHChh
Confidence 999999999888654
No 32
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.07 E-value=0.0023 Score=57.12 Aligned_cols=76 Identities=17% Similarity=0.282 Sum_probs=57.9
Q ss_pred eeeeEeeCceEEEecCC--------------CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEE
Q 007304 99 RKYAKIKHRALILTSTD--------------GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIY 164 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--------------g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~ 164 (608)
+++++|+++.|+..... -...+|+|.||.|... ..-. .|+|-++|..++ ...+|
T Consensus 36 ~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~~--~~~~----kr~~~F~l~t~~------~~~yl 103 (129)
T 2p0d_A 36 PSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHG--RHLS----SRRNVLHIRTIP------GHEFL 103 (129)
T ss_dssp EEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEEC--TTSC----SSSSEEEEECTT------SCEEE
T ss_pred EEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEEC--CCCC----CCCcEEEEEcCC------CCEEE
Confidence 58999999999998654 2256999999998653 2211 356777777432 45688
Q ss_pred EEeccchhHHHHHHHHHHHhcc
Q 007304 165 IFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 165 ~y~et~~EKEsWckaLr~as~~ 186 (608)
|.+|+-=|.+.|.+||+.|...
T Consensus 104 ~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 104 LQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp EECSCHHHHHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988754
No 33
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=97.03 E-value=0.0021 Score=55.29 Aligned_cols=80 Identities=16% Similarity=0.247 Sum_probs=59.4
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+||++|+++.|+..... .. ...|.|.+|....... ....-.+.|.+.|.. ..+++||++||--|.+.
T Consensus 32 ~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~---~~~~~~~~~~F~i~~-------~~r~~~l~a~s~~e~~~ 101 (125)
T 1eaz_A 32 RRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECK---QSDIMMRDNLFEIVT-------TSRTFYVQADSPEEMHS 101 (125)
T ss_dssp EEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECT---THHHHTCSSEEEEEC-------SSCEEEEECSSHHHHHH
T ss_pred eEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeecc---ccccCCcCCEEEEEe-------CCcEEEEEcCCHHHHHH
Confidence 58999999999998653 22 5799999997544321 111223467777774 35789999999999999
Q ss_pred HHHHHHHHhcccc
Q 007304 176 WCKALRLASCEDK 188 (608)
Q Consensus 176 WckaLr~as~~~k 188 (608)
|..+|+.|....+
T Consensus 102 W~~al~~~i~~~~ 114 (125)
T 1eaz_A 102 WIKAVSGAIVAQR 114 (125)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcc
Confidence 9999999876543
No 34
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.98 E-value=0.0026 Score=59.92 Aligned_cols=59 Identities=15% Similarity=0.239 Sum_probs=49.8
Q ss_pred eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhc
Q 007304 118 QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASC 185 (608)
Q Consensus 118 ~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~ 185 (608)
...|.|.||.|..+. ..|=.|+|=.+|.+++. +...++|.++|-=|.+.|++|+|.|+-
T Consensus 90 kG~IdL~gc~V~~~~-----~~~~~~~~vF~I~~~~~----~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 90 RGVLDVPACQIAIRP-----EGKNNRLFVFSISMPSV----AQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CEEECSTTCEEEEET-----TCSSSCSCEEEEECTTT----SSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cceEecCccEEEecc-----CCCCCCceEEEEeCCCC----CCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 589999999999854 35556888889987753 467899999999999999999999974
No 35
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=96.91 E-value=0.0032 Score=53.45 Aligned_cols=82 Identities=12% Similarity=0.131 Sum_probs=58.8
Q ss_pred eeeeEe-eCceEEEecCCC--C-eeEEecCCcEEEEEeCCCc----cccccccccCeeEecCCcccccCceeEEEEeccc
Q 007304 99 RKYAKI-KHRALILTSTDG--S-QTSFPLKGCEIKAVSASSL----SSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETS 170 (608)
Q Consensus 99 ~~~~~l-k~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~----~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~ 170 (608)
+|+++| +++.|+...... . ...|+|..+.|..-.+... +...-.+.|.+.|.++ +.+++||++||-
T Consensus 23 kR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~------~~r~~~l~a~s~ 96 (112)
T 3aj4_A 23 KNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCR------DGKTISLCAEST 96 (112)
T ss_dssp EEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEET------TSCEEEEECSSH
T ss_pred ceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCCcCcEEEEEec------CCcEEEEEeCCH
Confidence 589999 999998886633 2 4688998877664433311 1111223567777643 468899999999
Q ss_pred hhHHHHHHHHHHHhcc
Q 007304 171 WEKEAWCKALRLASCE 186 (608)
Q Consensus 171 ~EKEsWckaLr~as~~ 186 (608)
-|.+.|..||+.|.++
T Consensus 97 ~e~~~Wi~al~~a~~~ 112 (112)
T 3aj4_A 97 DDCLAWKFTLQDSRTN 112 (112)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999999763
No 36
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=96.89 E-value=0.0044 Score=53.84 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=59.8
Q ss_pred eeeeEeeCceEEEecCCC---CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTDG---SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg---~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+++++|+++.|++..... ....|+|.|+.+..+....- -.|+|-.+|.+++ .+.+||.+++--|.+.
T Consensus 22 ~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~~~~~~~----~~r~~~F~l~~~~------~~~y~f~A~s~ee~~~ 91 (112)
T 3cxb_B 22 TCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGGCRRANT----TDRPHAFQVILSD------RPCLELSAESEAEMAE 91 (112)
T ss_dssp EEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEEEEECCC----SSCTTEEEEEETT------SCCEEEECSSHHHHHH
T ss_pred EEEEEEECCEEEEECCCCCCCccceEEecCCEEEeeeccCC----CCCCeEEEEEcCC------CCEEEEEcCCHHHHHH
Confidence 589999999999996532 25689999887764443221 2366888887543 4578999999999999
Q ss_pred HHHHHHHHhccc
Q 007304 176 WCKALRLASCED 187 (608)
Q Consensus 176 WckaLr~as~~~ 187 (608)
|-++|+.|++..
T Consensus 92 Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 92 WMQHLCQAVSKG 103 (112)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhhcc
Confidence 999999998874
No 37
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.88 E-value=0.0021 Score=55.73 Aligned_cols=73 Identities=12% Similarity=0.216 Sum_probs=56.1
Q ss_pred eeeeEee--CceEEEecC--C---CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccch
Q 007304 99 RKYAKIK--HRALILTST--D---GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSW 171 (608)
Q Consensus 99 ~~~~~lk--~~~L~l~~~--d---g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~ 171 (608)
+|+++|+ ++.|+.... | ....+|.|.+|.|.... .+.|.+.|..++ .+++||++||-=
T Consensus 26 ~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~v~~~~---------~~~~~F~i~~~~------~r~~~l~a~s~~ 90 (120)
T 2d9x_A 26 YRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSD---------EDSHTFTVNAAS------GEQYKLRATDAK 90 (120)
T ss_dssp EEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCCEECCS---------SSSSCEEECCSS------SCCEEECCSSHH
T ss_pred EEEEEEECCCCEEEEEecCcccCCCccceEEcceEEEEecC---------CCCCEEEEEcCC------CCEEEEECCCHH
Confidence 6899999 578888855 3 23679999999865421 235777777443 478999999999
Q ss_pred hHHHHHHHHHHHhcc
Q 007304 172 EKEAWCKALRLASCE 186 (608)
Q Consensus 172 EKEsWckaLr~as~~ 186 (608)
|.+.|..+|+.|...
T Consensus 91 e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 91 ERQHWVSRLQICTQH 105 (120)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988765
No 38
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=96.78 E-value=0.0048 Score=59.95 Aligned_cols=79 Identities=9% Similarity=0.263 Sum_probs=61.0
Q ss_pred ceeeeEeeCceEEEecCCC--C-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 98 VRKYAKIKHRALILTSTDG--S-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg--~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
-+|+++|+++.|+...... . ..+|+|.+|.+..+... ...-.+.|.+.|..+ +.+++||+++|--|.+
T Consensus 127 kkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~~~~~---~~~~~k~~~F~I~t~------~~r~~~l~A~s~~e~~ 197 (211)
T 1u5e_A 127 QKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRMNNTL---RKDGKKDCCFEICAP------DKRIYQFTAASPKDAE 197 (211)
T ss_dssp EEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEECGGG---CSSTTGGGEEEEECS------SSCEEEEECSSHHHHH
T ss_pred EeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEEcCCc---cccCCCCCEEEEEcC------CCCEEEEEcCCHHHHH
Confidence 4789999999999987633 2 67999999999764321 111235688888854 3578999999999999
Q ss_pred HHHHHHHHHhc
Q 007304 175 AWCKALRLASC 185 (608)
Q Consensus 175 sWckaLr~as~ 185 (608)
.|..||+.|..
T Consensus 198 ~Wi~aL~~ai~ 208 (211)
T 1u5e_A 198 EWVQQLKFILQ 208 (211)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 39
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.74 E-value=0.0062 Score=52.01 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=54.7
Q ss_pred eeeeEeeCceEEEecCCC---CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 99 RKYAKIKHRALILTSTDG---SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg---~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+++|+++.|+...... ....|+|.+|....... +|.+.|.. ..+++||++||.-|.+.
T Consensus 27 kR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----------~~~F~i~~-------~~r~~~l~a~s~~e~~~ 89 (115)
T 2cod_A 27 KRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----------DNKFEVVT-------TQRTFVFRVEKEEERND 89 (115)
T ss_dssp EEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET----------TTEEEEEE-------SSCCEEEECSSHHHHHH
T ss_pred eEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC----------CCEEEEEe-------CCcEEEEECCCHHHHHH
Confidence 589999999999986632 26799999996433221 46666653 35779999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|..+|+.|...
T Consensus 90 Wi~~l~~~~~~ 100 (115)
T 2cod_A 90 WISILLNALKS 100 (115)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988743
No 40
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=96.74 E-value=0.0065 Score=63.14 Aligned_cols=82 Identities=22% Similarity=0.298 Sum_probs=63.7
Q ss_pred eeeeEeeCceEEEecC--CCC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCCc---------------ccccCc
Q 007304 99 RKYAKIKHRALILTST--DGS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSS---------------VLYNGS 160 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~---------------~iy~~s 160 (608)
+|+++|+++.|+.... |.. ..+|+|.+|.|..+... .++|.+.|.+++. .+....
T Consensus 231 kRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~v~~~~~~-------~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~ 303 (347)
T 2r09_A 231 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDP-------RKPNCFELYNPSHKGQVIKACKTEADGRVVEGNH 303 (347)
T ss_dssp EEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEEECCS-------SCSSEEEEECSSSTTCCCCCEEECTTSCEEECCC
T ss_pred eEEEEEcCCEEEEEcCCCccCCcEEEEcCCeEEEEccCC-------CCCCEEEEEeCCccccccccccccccccccccCc
Confidence 5899999999999976 322 57999999998887542 3567777776532 122335
Q ss_pred eeEEEEeccchhHHHHHHHHHHHhccc
Q 007304 161 KLIYIFLETSWEKEAWCKALRLASCED 187 (608)
Q Consensus 161 k~~~~y~et~~EKEsWckaLr~as~~~ 187 (608)
+++||.++|--|.+.|..+|+.|....
T Consensus 304 r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 304 VVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 789999999999999999999998765
No 41
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.68 E-value=0.0065 Score=52.77 Aligned_cols=71 Identities=17% Similarity=0.233 Sum_probs=55.5
Q ss_pred eeeeEeeCc--eEEEecC--CC-CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 99 RKYAKIKHR--ALILTST--DG-SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 99 ~~~~~lk~~--~L~l~~~--dg-~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
+|+++|+++ .|+.... |. ...+|.|.+|.+.... + .+.+.++|..+ .+++||++||.-|.
T Consensus 28 kRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~~----~----~~~~~F~i~~~-------~r~~~l~a~s~~e~ 92 (119)
T 2dhk_A 28 SRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCKA----D----AEEGIFEIKTP-------SRVITLKAATKQAM 92 (119)
T ss_dssp EEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEECT----T----GGGCEEEEECS-------SCCEEEECSSHHHH
T ss_pred eEEEEEECCccEEEEECCCCCcccccEEECCCCEEEecC----C----CCCCEEEEEeC-------CcEEEEECCCHHHH
Confidence 579999999 8988765 32 2689999999987631 1 23566666643 57789999999999
Q ss_pred HHHHHHHHHHh
Q 007304 174 EAWCKALRLAS 184 (608)
Q Consensus 174 EsWckaLr~as 184 (608)
+.|..+|+.|.
T Consensus 93 ~~Wi~al~~~~ 103 (119)
T 2dhk_A 93 LYWLQQLQMKR 103 (119)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999886
No 42
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=96.57 E-value=0.0081 Score=54.77 Aligned_cols=79 Identities=10% Similarity=0.159 Sum_probs=60.1
Q ss_pred eeeeEeeCceEEEecCCC------------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEE
Q 007304 99 RKYAKIKHRALILTSTDG------------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIF 166 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg------------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y 166 (608)
|+..+|+|+.|+.+++.. +...|+|+||.|..+.. ++ |+|-..|.+++. ..+++|=
T Consensus 26 r~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e~---~~----~~~~F~L~~~~~-----G~~Y~fq 93 (126)
T 2dtc_A 26 RYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPDD---PE----HPDIFQLNNPDK-----GNVYKFQ 93 (126)
T ss_dssp EEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCCC---TT----STTEEEEECTTS-----CSEEEEE
T ss_pred cEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecCC---CC----CCCEEEEeeCCC-----CCEEEEe
Confidence 478999999999998541 25699999999985444 33 466677765532 2557777
Q ss_pred eccchhHHHHHHHHHHHhccccc
Q 007304 167 LETSWEKEAWCKALRLASCEDKK 189 (608)
Q Consensus 167 ~et~~EKEsWckaLr~as~~~k~ 189 (608)
+++-=|.+.|++||+.|...+..
T Consensus 94 A~s~~~~~~W~~ai~~a~~~~~~ 116 (126)
T 2dtc_A 94 TGSRFHAILWHKHLDDACKSSRP 116 (126)
T ss_dssp CSSHHHHHHHHHHHHHHHTSCCC
T ss_pred CCCHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999987543
No 43
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=96.54 E-value=0.0043 Score=65.24 Aligned_cols=96 Identities=21% Similarity=0.279 Sum_probs=72.8
Q ss_pred hhhccceEEEeCC-CCCCc-cccchHHHhhccceeeccceeeeEeeCceEEEecCCC--CeeEEecCCcEEEEEeCCCcc
Q 007304 62 AYKKQGYVWVLEP-EKVPK-EKFSKEQKKKKEFLEVYPVRKYAKIKHRALILTSTDG--SQTSFPLKGCEIKAVSASSLS 137 (608)
Q Consensus 62 ~~~~~g~~wv~~~-~~~~k-~k~~k~~k~~k~~~ev~p~~~~~~lk~~~L~l~~~dg--~~~~i~l~~C~v~avs~s~~~ 137 (608)
...|+|++|.-.. +...| | .||+++|+++.|+....+. ....|.|.+|+|..+...
T Consensus 300 ~~~k~G~L~k~~~~g~~~~~W-----------------~rrwfvl~~~~l~y~~~~~~~~~~~~~l~~~~v~~~~~~--- 359 (407)
T 4h8s_A 300 LIQKAGYLNLRNKTGLVTTTW-----------------ERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSVMAVDCE--- 359 (407)
T ss_dssp CSCCEEEEEEEEECSSSCEEE-----------------EEEEEEECSSCEECCCTTCSSCCCCBCSSCCEEEEECCT---
T ss_pred cceeeceeeeeccCCCCCCCc-----------------eEEEEEEECCEEEEEeCCCCCCCeEEECCceEEEECCCC---
Confidence 3679999997542 22222 4 3589999999999885522 256889999999876552
Q ss_pred ccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 138 SRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 138 srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
.|||+..|.+++ +.+++||.+||--|.+.|..||+.|...
T Consensus 360 ----~r~~cF~i~~~~-----~~~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 360 ----DRRYCFQITTPN-----GKSGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp ----TCSSEEEEECTT-----SSCCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred ----CCCceEEEEecC-----CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 257888988765 3457899999999999999999998765
No 44
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=96.50 E-value=0.0077 Score=58.84 Aligned_cols=74 Identities=9% Similarity=0.209 Sum_probs=60.1
Q ss_pred ceeeeEeeCceEEEecCCCC---eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 98 VRKYAKIKHRALILTSTDGS---QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg~---~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
-+|+++|+++.|+....+.. ..+|+|.+|.+..... .++|.+.|.. ..+++||.+||--|.+
T Consensus 80 kkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~--------~k~~~F~I~t-------~~r~~~l~A~s~~e~~ 144 (228)
T 3tfm_A 80 KKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT--------NKENGIDIIM-------ADRTFHLIAESPEDAS 144 (228)
T ss_dssp EEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET--------TTTSEEEEEC-------SSCEEEEECSSHHHHH
T ss_pred eEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC--------CCCcEEEEEc-------CCcEEEEEcCCHHHHH
Confidence 47899999999999877432 5799999999754322 3577888864 3578999999999999
Q ss_pred HHHHHHHHHhcc
Q 007304 175 AWCKALRLASCE 186 (608)
Q Consensus 175 sWckaLr~as~~ 186 (608)
.|..||+.|...
T Consensus 145 ~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 145 QWFSVLSQVHSS 156 (228)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhc
Confidence 999999999874
No 45
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=96.47 E-value=0.003 Score=55.21 Aligned_cols=86 Identities=13% Similarity=0.251 Sum_probs=59.1
Q ss_pred eeeeEeeCceEEEecC--C----CCeeEEecCCcEEEEEeCCCccccccccccCeeEec--CCc-----ccccC------
Q 007304 99 RKYAKIKHRALILTST--D----GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVEN--KSS-----VLYNG------ 159 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--d----g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~--~~~-----~iy~~------ 159 (608)
+|+++|+++.|+.... | ....+|+|.+|.+..|.... ...-.++|...|.+ |.+ .+...
T Consensus 25 rRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~--~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~ 102 (134)
T 2y7b_A 25 RRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPAN--REFCARRNTFELITVRPQREDDRETLVSQCRDTLC 102 (134)
T ss_dssp EEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECC--TTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEE
T ss_pred EEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccc--hhhccCCCEEEEEecCCCcccccccccccccCCCc
Confidence 6899999999999963 3 33679999999853333211 11234566677765 221 11111
Q ss_pred ceeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 160 SKLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 160 sk~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
.+++||.+||-=|.+.|..||+.|...
T Consensus 103 ~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 103 VTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 147999999999999999999988654
No 46
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=96.46 E-value=0.013 Score=53.74 Aligned_cols=81 Identities=12% Similarity=0.192 Sum_probs=66.8
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEEEEEeCCCccccccccccCeeEecCC-cccccCceeEEEEeccchhHH
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKS-SVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~-~~iy~~sk~~~~y~et~~EKE 174 (608)
++.=+|.++.|+-...+ .. ...|+|+||.|.-|....+ .++|-..|.+++ +.+|...+++.|-++|--|.|
T Consensus 32 ~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~~~~~-----~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~ 106 (125)
T 1dyn_A 32 EYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVEKGFM-----SSKHIFALFNTEQRNVYKDYRQLELACETQEEVD 106 (125)
T ss_dssp EEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECCSCSS-----SSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHH
T ss_pred eeEEEEeccceeeecCCcccccceEEECCCceEeccCCCCC-----CCceEEEEECCCCccccccceEEEEeCCCHHHHH
Confidence 47889999999887542 22 4689999999999986422 478999999986 679999999999999999999
Q ss_pred HHHHHHHHHh
Q 007304 175 AWCKALRLAS 184 (608)
Q Consensus 175 sWckaLr~as 184 (608)
+|-++++-|+
T Consensus 107 ~Wi~s~~ra~ 116 (125)
T 1dyn_A 107 SWKASFLRAG 116 (125)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhCc
Confidence 9999994443
No 47
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=96.44 E-value=0.0063 Score=52.84 Aligned_cols=77 Identities=10% Similarity=0.140 Sum_probs=58.7
Q ss_pred eeeeEeeCceEEEecC--CC-------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHRALILTST--DG-------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg-------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+++++|+++.|+.... |. ....|.|.+|.|..... .-.|+|-++|..++ .+++||-+++
T Consensus 34 ~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~~~------~~~r~~~F~i~~~~------~~~~~f~A~s 101 (123)
T 1wjm_A 34 NVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVAFD------YRKRKHVFKLGLQD------GKEYLFQAKD 101 (123)
T ss_dssp EEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEECTT------CSSCSSEEEEECSS------SCEEEEECSS
T ss_pred EEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeeccc------ccCCCCEEEEEEcC------CcEEEEECCC
Confidence 5799999999999866 21 13479999998875432 12356778877432 3688999999
Q ss_pred chhHHHHHHHHHHHhccc
Q 007304 170 SWEKEAWCKALRLASCED 187 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~~ 187 (608)
--|.+.|..||+.|....
T Consensus 102 ~~e~~~Wi~ai~~~~~~~ 119 (123)
T 1wjm_A 102 EAEMSSWLRVVNAAIASG 119 (123)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999987653
No 48
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=96.44 E-value=0.015 Score=53.21 Aligned_cols=95 Identities=13% Similarity=0.184 Sum_probs=62.2
Q ss_pred eeeeEeeCceEEEecCCCC-----eeEEecC--CcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccch
Q 007304 99 RKYAKIKHRALILTSTDGS-----QTSFPLK--GCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSW 171 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~-----~~~i~l~--~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~ 171 (608)
+++++|+++.|+....... ...|+|. +|.|...... =.++|.+.|..++ +++||.+||--
T Consensus 31 kRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~~~~------~~~~~~F~I~t~~-------r~~~l~A~s~~ 97 (168)
T 2j59_M 31 QMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDISYSE------TKRKNVFRLTTSD-------CECLFQAEDRD 97 (168)
T ss_dssp EEEEEEETTEEEEESCTTCC--------CEECSSCEEEECSSS------CSCSSEEEEECSS-------CEEEEECSSHH
T ss_pred EEEEEEeCCEEEEEECCcccccccCCceEecccceEEEecccc------CCCCCEEEEEeCC-------ceEEEEcCCHH
Confidence 6799999999999866421 3455554 4877543221 1345777777442 67999999999
Q ss_pred hHHHHHHHHHHHhccccchhhHHH--HHHHHHHHHHh
Q 007304 172 EKEAWCKALRLASCEDKKRLEWFT--KLNEDFHIYLT 206 (608)
Q Consensus 172 EKEsWckaLr~as~~~k~~~~w~~--kl~~~f~~y~~ 206 (608)
|.+.|-.||+.|+....+...+.. .......+|..
T Consensus 98 e~~~Wi~ai~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 134 (168)
T 2j59_M 98 DMLAWIKTIQESSNLNEEDTGVTNRDLISRRIKEYNN 134 (168)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccccccccchhhhcccchhhh
Confidence 999999999999987655443422 23444455554
No 49
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=96.38 E-value=0.0081 Score=56.32 Aligned_cols=81 Identities=15% Similarity=0.216 Sum_probs=59.5
Q ss_pred eeeeEeeCceEEEecC------CCC-eeEEecCCcEE-EEEeCCCccccccccc---------------------cCeeE
Q 007304 99 RKYAKIKHRALILTST------DGS-QTSFPLKGCEI-KAVSASSLSSRKWAKR---------------------FPIKV 149 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~------dg~-~~~i~l~~C~v-~avs~s~~~srKwaKk---------------------fpIkv 149 (608)
+|+-+|+++.|..... |+. ..+|+|.+|.+ ..|... +.....++ |+++|
T Consensus 26 kRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I 103 (169)
T 1btk_A 26 KCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPE--KNPPPERQIPRRGEESSEMEQISIIERFPYPFQV 103 (169)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCC--SSCCGGGCC---------CCTTHHHHCCCEEEEE
T ss_pred eEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCC--CCcchhcccccccCcccccccccccccccccEEE
Confidence 4789999999999874 233 57999999874 445321 11223333 66777
Q ss_pred ecCCcccccCceeEEEEeccchhHHHHHHHHHHHhcccc
Q 007304 150 ENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASCEDK 188 (608)
Q Consensus 150 e~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~~~k 188 (608)
.+++ +++||++||-=|.+.|-+|||.|...+.
T Consensus 104 ~t~~-------rt~yl~A~s~~E~~eWi~aI~~~i~~n~ 135 (169)
T 1btk_A 104 VYDE-------GPLYVFSPTEELRKRWIHQLKNVIRYNS 135 (169)
T ss_dssp EETT-------CCEEEEESCHHHHHHHHHHHHHHHTTCS
T ss_pred EeCC-------ceEEEEcCCHHHHHHHHHHHHHHHHHCc
Confidence 7554 6899999999999999999999887653
No 50
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=96.34 E-value=0.014 Score=55.57 Aligned_cols=79 Identities=24% Similarity=0.368 Sum_probs=63.4
Q ss_pred eeeeEeeCceEEEecC--C--CC-eeEEecCCcEEEE-EeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIKHRALILTST--D--GS-QTSFPLKGCEIKA-VSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--d--g~-~~~i~l~~C~v~a-vs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
++++++||..|....+ | |. ...|.|.||+|.- |+-+ ..||+|||.-|.. .|-.-+||=.||-=+
T Consensus 47 ryWfv~kDt~LsyYKSkEe~~geP~~~inLrGCEVtPDVnva-------~~Kf~ikL~ip~~---~gm~e~~LrcdsE~Q 116 (165)
T 4bbk_A 47 QYWFVFKDTSIAYFKNKELEQGEPIEKLNLRGCEIVPDVNVS-------GRKFGIKLLIPVA---DGMNEVYLRCDHEDQ 116 (165)
T ss_dssp EEEEEEETTEEEEESSGGGTTSCCSEEEECTTCEEEEEEETT-------TTEEEEEEEEEET---TEEEEEEEEESSHHH
T ss_pred eEEEEEeCCEEEEEcCHHHhcCCCceEEecCccEEecccccc-------cceeeEEEecCCC---CcceeeeeecCCHHH
Confidence 4789999999999866 3 43 6799999999985 6643 3689999987653 367778888888888
Q ss_pred HHHHHHHHHHHhccc
Q 007304 173 KEAWCKALRLASCED 187 (608)
Q Consensus 173 KEsWckaLr~as~~~ 187 (608)
---|--|+||||..+
T Consensus 117 Ya~WMAAcrLAskGk 131 (165)
T 4bbk_A 117 YARWMAACILASKGK 131 (165)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhhccccc
Confidence 889999999999873
No 51
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=96.25 E-value=0.015 Score=58.53 Aligned_cols=76 Identities=13% Similarity=0.211 Sum_probs=60.1
Q ss_pred eeeeEeeCceEEEecCC--------C-CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHRALILTSTD--------G-SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--------g-~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+++++|+++.|+..... . ....|+|.||.|..+... + .|+|...|..+ ..+++||.+|+
T Consensus 41 rRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~~~~~--~----kk~~~F~I~t~------~~r~y~f~A~s 108 (263)
T 3a8p_A 41 QYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQSVPEH--P----KKEHVFCLSNS------CGDVYLFQATS 108 (263)
T ss_dssp EEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEECTTC--S----SCSSEEEEECT------TSCEEEEECSS
T ss_pred EEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEECCcC--C----CCCCEEEEEcC------CCcEEEEEcCC
Confidence 58999999999998752 1 246899999998875331 1 25788888754 45788999999
Q ss_pred chhHHHHHHHHHHHhcc
Q 007304 170 SWEKEAWCKALRLASCE 186 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~ 186 (608)
.-|.+.|..||+.|+..
T Consensus 109 ~ee~~~Wi~aI~~a~~~ 125 (263)
T 3a8p_A 109 QTDLENWVTAIHSACAS 125 (263)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988765
No 52
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=96.19 E-value=0.019 Score=51.38 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=55.9
Q ss_pred eeeeEee---CceEEEec-----CCCC--eeEEecCCc-EEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEe
Q 007304 99 RKYAKIK---HRALILTS-----TDGS--QTSFPLKGC-EIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFL 167 (608)
Q Consensus 99 ~~~~~lk---~~~L~l~~-----~dg~--~~~i~l~~C-~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~ 167 (608)
||+.+|+ ++.|+-.+ +++. ..+|+|.+| .|..+....-+ .++|.+.++ .+.+++||.+
T Consensus 34 rRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~----~~~~~F~i~-------t~~r~y~l~A 102 (126)
T 1v5p_A 34 RRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPKQKP----KTPFCFVIN-------ALSQRYFLQA 102 (126)
T ss_dssp EEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTTTSC----SCSSEEEEE-------CSSCEEEEEC
T ss_pred ceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcccCC----CCCEEEEEE-------CCCEEEEEEC
Confidence 5899999 77888754 3333 589999995 55554422212 346777665 2467899999
Q ss_pred ccchhHHHHHHHHHHHhcc
Q 007304 168 ETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 168 et~~EKEsWckaLr~as~~ 186 (608)
||.-|.+.|-+||+.|+..
T Consensus 103 ~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 103 NDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp SSHHHHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 9999999999999998754
No 53
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=96.03 E-value=0.0022 Score=55.64 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=53.8
Q ss_pred eeeeEeeC-ceEEEecCCCC---eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 99 RKYAKIKH-RALILTSTDGS---QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 99 ~~~~~lk~-~~L~l~~~dg~---~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
+|+++|++ +.|+....... ...|+|.+|.|..+.... ..-.+.|.+.|.++. -...+.+||+++|--|.+
T Consensus 26 kRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~---~~~~~~~~F~I~~~~---~~~~~~~~~~a~s~~e~~ 99 (125)
T 1unq_A 26 PRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMK---TERPRPNTFIIRCLQ---WTTVIERTFHVETPEERE 99 (125)
T ss_dssp EEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEE---ECSSSTTEEEEEEEE---TTEEEEEEEECSSHHHHH
T ss_pred CcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecc---cccCCCCEEEEEecC---CCCceeEEEEeCCHHHHH
Confidence 58999995 58876654222 346777776643111000 001356777776432 123568899999999999
Q ss_pred HHHHHHHHHhccc
Q 007304 175 AWCKALRLASCED 187 (608)
Q Consensus 175 sWckaLr~as~~~ 187 (608)
.|..||+.|....
T Consensus 100 ~Wi~al~~~~~~~ 112 (125)
T 1unq_A 100 EWTTAIQTVADGL 112 (125)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998663
No 54
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=96.02 E-value=0.016 Score=60.50 Aligned_cols=77 Identities=16% Similarity=0.289 Sum_probs=61.5
Q ss_pred ceeeeEeeCceEEEecCCCC--eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 98 VRKYAKIKHRALILTSTDGS--QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg~--~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
-+|+++|+++.|+....+.. ...|.|.+|.|..+... .|+|...|..++ |.+++||.+||--|.+.
T Consensus 298 kkRwfvL~~~~L~y~k~~~~~~~~~i~l~~~~v~~~~~~-------~r~~~F~i~t~~-----~~~~~~l~A~s~~e~~~ 365 (385)
T 2q13_A 298 DRQFYFTQGGNLMSQARGDVAGGLAMDIDNCSVMAVDCE-------DRRYCFQITSFD-----GKKSSILQAESKKDHEE 365 (385)
T ss_dssp EEEEEEEETTEEEEECSSCSSCEEEEECTTCEEEEECCT-------TCSSEEEEECTT-----SCBCCCEECSSHHHHHH
T ss_pred eeEEEEEECCEEEEecCCCcCCCceEEccceEEEecccc-------CCCceEEEEeCC-----CCeEEEEEeCCHHHHHH
Confidence 35899999999998866322 46899999999876431 467888888665 23778999999999999
Q ss_pred HHHHHHHHhcc
Q 007304 176 WCKALRLASCE 186 (608)
Q Consensus 176 WckaLr~as~~ 186 (608)
|-+||+.|...
T Consensus 366 Wi~ai~~~~~~ 376 (385)
T 2q13_A 366 WICTINNISKQ 376 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 99999998764
No 55
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=95.93 E-value=0.014 Score=57.44 Aligned_cols=86 Identities=9% Similarity=0.142 Sum_probs=60.0
Q ss_pred eeeeEeeCceEEEecCCC------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIKHRALILTSTDG------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
+||++|+++.|+...... ....+.|.+|.|..+.... +.-+-.++|+.+|.++... -....+.||.+||--|
T Consensus 186 kR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~-~~~~~~~~~~F~i~~~~~~-~~~~~~~~l~A~s~~e 263 (291)
T 3tca_A 186 RRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCK-MKYKAPTDHCFVLKHPQIQ-KESQYIKYLCCDDART 263 (291)
T ss_dssp EEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHH-HHHCCSSSCEEEEECTTCC-SCCTTSEEEECSSHHH
T ss_pred EEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccc-cccCCCCCeEEEEEcCCCC-CCCceEEEEECCCHHH
Confidence 589999999999885422 2234566777776665411 1223456789999876532 1233568899999999
Q ss_pred HHHHHHHHHHHhcc
Q 007304 173 KEAWCKALRLASCE 186 (608)
Q Consensus 173 KEsWckaLr~as~~ 186 (608)
.+.|-.|||+|.-.
T Consensus 264 ~~~Wi~air~Ak~g 277 (291)
T 3tca_A 264 LSQWVMGIRIAKYG 277 (291)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999999644
No 56
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=95.85 E-value=0.0078 Score=52.51 Aligned_cols=75 Identities=17% Similarity=0.248 Sum_probs=57.4
Q ss_pred eeeeEeeCceEEEecCCCCe-----------eEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEe
Q 007304 99 RKYAKIKHRALILTSTDGSQ-----------TSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFL 167 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~~-----------~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~ 167 (608)
+++++|+++.|++...+... .+|+|.+|.|..++.. -.|+|-++|... ..+++||-+
T Consensus 34 ~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~~d~------~kr~~~F~l~t~------~~~~~lfqA 101 (122)
T 1dro_A 34 KVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIASDY------TKKKHVLRVKLA------NGALFLLQA 101 (122)
T ss_dssp EEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEECCSS------SSSTTEEEEECS------SSCEEEEEC
T ss_pred EEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeCCCC------CCCCeEEEEEEc------CCCEEEEEC
Confidence 57899999999998664321 4699999988754321 135778888732 347899999
Q ss_pred ccchhHHHHHHHHHHHhc
Q 007304 168 ETSWEKEAWCKALRLASC 185 (608)
Q Consensus 168 et~~EKEsWckaLr~as~ 185 (608)
++-=|.+.|.+||+.|..
T Consensus 102 ~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 102 HDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp SSSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999998875
No 57
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=95.80 E-value=0.044 Score=48.37 Aligned_cols=76 Identities=11% Similarity=0.191 Sum_probs=56.0
Q ss_pred eeeeEeeCceEEEecC--CC-------------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeE
Q 007304 99 RKYAKIKHRALILTST--DG-------------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLI 163 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg-------------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~ 163 (608)
+++++|+++.|++... +. ....|+|.||.|...+. +-. .|+|-++|..+ ....+
T Consensus 33 ~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~a~v~~~~~-d~~----krk~vF~l~t~------~~~~y 101 (124)
T 3pp2_A 33 ASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRGATLSWAPK-DKS----SRKNVLELRSR------DGSEY 101 (124)
T ss_dssp EEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTTCEEEECCG-GGC----SSSSEEEEECT------TSCEE
T ss_pred EEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCCCEEEeccc-ccC----CCceEEEEECC------CCCEE
Confidence 4689999999998753 11 25789999999886641 112 24677777632 23577
Q ss_pred EEEeccchhHHHHHHHHHHHhc
Q 007304 164 YIFLETSWEKEAWCKALRLASC 185 (608)
Q Consensus 164 ~~y~et~~EKEsWckaLr~as~ 185 (608)
+|-+++-=|.+.|.++|+.|-.
T Consensus 102 lfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 102 LIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp EEECSCHHHHHHHHHHHHHHHC
T ss_pred EEECCCHHHHHHHHHHHHHHHh
Confidence 8889999999999999998854
No 58
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=95.61 E-value=0.046 Score=48.55 Aligned_cols=85 Identities=13% Similarity=0.289 Sum_probs=58.4
Q ss_pred ceeeeEeeCceEEEecCCC------CeeEEecCCcE-EEEEeCCCccccccccccC--eeEecCCcccccCceeEEEEec
Q 007304 98 VRKYAKIKHRALILTSTDG------SQTSFPLKGCE-IKAVSASSLSSRKWAKRFP--IKVENKSSVLYNGSKLIYIFLE 168 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg------~~~~i~l~~C~-v~avs~s~~~srKwaKkfp--Ikve~~~~~iy~~sk~~~~y~e 168 (608)
.++|++|.+..|++.+.++ ....|+|..|. |.+|.++..-... .+.+| .+|.... .-....+.+||+++
T Consensus 21 kkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~-~~~~p~iF~I~~~~-~~~~~~~~l~l~A~ 98 (117)
T 2rov_A 21 VKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRAD-AKEIPRIFQILYAN-EGISSAKNLLLLAN 98 (117)
T ss_dssp CEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSC-TTTGGGEEEEEECS-SSSTTCEEEEEECS
T ss_pred EEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccc-cccCCcEEEEEeCC-CCCCCCcEEEEEeC
Confidence 3689999999999998632 25799997764 5777775331110 12234 5554222 11344689999999
Q ss_pred cchhHHHHHHHHHHHh
Q 007304 169 TSWEKEAWCKALRLAS 184 (608)
Q Consensus 169 t~~EKEsWckaLr~as 184 (608)
+-=|+..|-.+|+.+-
T Consensus 99 s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 99 STEEQQKWVSRLVKKI 114 (117)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999763
No 59
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=95.19 E-value=0.034 Score=48.82 Aligned_cols=80 Identities=15% Similarity=0.254 Sum_probs=51.7
Q ss_pred eeeeEeeC-ceEEEecC--C---CC-eeEEecCCcEEEEEeC--------------CCccccccccccCeeEecCCcccc
Q 007304 99 RKYAKIKH-RALILTST--D---GS-QTSFPLKGCEIKAVSA--------------SSLSSRKWAKRFPIKVENKSSVLY 157 (608)
Q Consensus 99 ~~~~~lk~-~~L~l~~~--d---g~-~~~i~l~~C~v~avs~--------------s~~~srKwaKkfpIkve~~~~~iy 157 (608)
+|+.+|++ +.|+-.+. | .. ..+|.|..|.+..... ...+... .++|...|.+++
T Consensus 24 kRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~-~~~~~F~I~t~~---- 98 (128)
T 2rlo_A 24 KKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGSAGQAE-EENFEFLIVSST---- 98 (128)
T ss_dssp EEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCCCSSCC-CCCCCEEEECTT----
T ss_pred EEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCccccccccccccccccccccc-cCCceEEEEcCC----
Confidence 47899995 67877754 1 11 1356666655542210 0001111 467888877543
Q ss_pred cCceeEEEEeccchhHHHHHHHHHHHhc
Q 007304 158 NGSKLIYIFLETSWEKEAWCKALRLASC 185 (608)
Q Consensus 158 ~~sk~~~~y~et~~EKEsWckaLr~as~ 185 (608)
.+++||.+||.=|.+.|-.||+.|..
T Consensus 99 --~r~~~l~A~s~~e~~~Wi~ai~~~i~ 124 (128)
T 2rlo_A 99 --GQTWHFEAASFEERDAWVQAIESQIL 124 (128)
T ss_dssp --SCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999999998753
No 60
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.92 E-value=0.15 Score=44.90 Aligned_cols=82 Identities=15% Similarity=0.149 Sum_probs=54.7
Q ss_pred eeeeEe-eCceEEEecCCC--C-eeEEecC-Cc-EEEEEeC--CCccccccccccCeeEecCCcccccCceeEEEEeccc
Q 007304 99 RKYAKI-KHRALILTSTDG--S-QTSFPLK-GC-EIKAVSA--SSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETS 170 (608)
Q Consensus 99 ~~~~~l-k~~~L~l~~~dg--~-~~~i~l~-~C-~v~avs~--s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~ 170 (608)
+|+.+| +++.|+...... . ...|.+. .| .|..-.. ...+...-.++|..+|.+++ .+++||++||-
T Consensus 26 kRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~------~r~~~l~A~s~ 99 (130)
T 2d9v_A 26 RNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLRE------GSRLHLCAETR 99 (130)
T ss_dssp EEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETT------SCEEEEECSSH
T ss_pred eeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCC------CCEEEEEcCCH
Confidence 589999 899999987633 2 3567665 34 3322100 01111223456778887533 35799999999
Q ss_pred hhHHHHHHHHHHHhcc
Q 007304 171 WEKEAWCKALRLASCE 186 (608)
Q Consensus 171 ~EKEsWckaLr~as~~ 186 (608)
-|.+.|-.||+.|...
T Consensus 100 ~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 100 DDAIAWKTALMEANST 115 (130)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999999754
No 61
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=94.91 E-value=0.068 Score=53.76 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=57.5
Q ss_pred ceeeeEeeCc-------eEEEecC--C------CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCcee
Q 007304 98 VRKYAKIKHR-------ALILTST--D------GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKL 162 (608)
Q Consensus 98 ~~~~~~lk~~-------~L~l~~~--d------g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~ 162 (608)
-+|+.+|+++ .|...+. | ....+|.|.+|..+.... . -.++|.+.|..+ .++
T Consensus 23 kkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~----~--~~~~~~F~I~t~-------~rt 89 (264)
T 1qqg_A 23 HKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRA----D--SKNKHLVALYTR-------DEH 89 (264)
T ss_dssp CEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEEC----C--SSCSSEEEEEES-------SCE
T ss_pred EeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEecc----C--CCCCcEEEEEEC-------CEE
Confidence 3679999999 8988876 3 246899999997433222 1 235677888744 578
Q ss_pred EEEEeccchhHHHHHHHHHHHhccccc
Q 007304 163 IYIFLETSWEKEAWCKALRLASCEDKK 189 (608)
Q Consensus 163 ~~~y~et~~EKEsWckaLr~as~~~k~ 189 (608)
+||.+||--|.+.|..+|+.|....+.
T Consensus 90 y~l~A~se~e~~~Wi~aL~~~~~~~k~ 116 (264)
T 1qqg_A 90 FAIAADSEAEQDSWYQALLQLHNRAKG 116 (264)
T ss_dssp EEEECSSHHHHHHHHHHHHHHC-----
T ss_pred EEEEeCCHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999877543
No 62
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=94.43 E-value=0.14 Score=54.18 Aligned_cols=84 Identities=12% Similarity=0.107 Sum_probs=59.5
Q ss_pred eeeeEeeCceEEEecCC--CC-eeEEecCCcEE-EEEeCCCccccccc--cccCeeEecCCcccccCceeEEEEeccchh
Q 007304 99 RKYAKIKHRALILTSTD--GS-QTSFPLKGCEI-KAVSASSLSSRKWA--KRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d--g~-~~~i~l~~C~v-~avs~s~~~srKwa--KkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
+|+.+|+++.|+..... .. ...|.|..|.. ..|.... |...-. ++|.+.|..++ +++||++||--|
T Consensus 288 kRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~-~~~~~~~~~~~~F~I~t~~-------rty~l~A~s~~e 359 (386)
T 3lju_X 288 KRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGF-PPSTQGHHWPHGITIVTPD-------RKFLFACETESD 359 (386)
T ss_dssp EEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESC-CTTCCSCCSCEEEEEECSS-------CEEEEEESSHHH
T ss_pred ccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccC-CccccccCCCcEEEEEeCC-------eEEEEEcCCHHH
Confidence 58999999999998763 22 47999977643 2333211 222222 25888888553 789999999999
Q ss_pred HHHHHHHHHHHhccccch
Q 007304 173 KEAWCKALRLASCEDKKR 190 (608)
Q Consensus 173 KEsWckaLr~as~~~k~~ 190 (608)
.+.|..||+.|-..--++
T Consensus 360 ~~~Wi~aL~~~i~~p~~p 377 (386)
T 3lju_X 360 QREWVAAFQKAVDRPMLP 377 (386)
T ss_dssp HHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHhccCCc
Confidence 999999999987653333
No 63
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=93.93 E-value=0.11 Score=54.94 Aligned_cols=78 Identities=18% Similarity=0.246 Sum_probs=57.3
Q ss_pred ceeeeEe--eCceEEEecCCC---CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 98 VRKYAKI--KHRALILTSTDG---SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 98 ~~~~~~l--k~~~L~l~~~dg---~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
-||+.+| +++.|.....+. ...+|.|.+|.+... | -+-.+.|.+.+.... -.+.+++|||+|++-|
T Consensus 163 krRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~~~~~~-----~-~~~~~~~~f~I~~~~---~~~~R~y~l~A~s~~e 233 (386)
T 3lju_X 163 LSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQ-----P-AKIGHPHGLQVTYLK---DNSTRNIFIYHEDGKE 233 (386)
T ss_dssp EEEEEEEETTTTEEEEEC-----CCSEEEEGGGEEEEEC-----H-HHHTSTTCEEEEEEE---TTEEEEEEEECSSHHH
T ss_pred eEEEEEEEcCCCEEEEECCCCccCcccEEEeeccEEEEc-----c-cccCCCceEEEEEec---CCCceEEEEEcCCHHH
Confidence 4578899 999999987633 257999999977762 1 233467777765111 2455899999999999
Q ss_pred HHHHHHHHHHHh
Q 007304 173 KEAWCKALRLAS 184 (608)
Q Consensus 173 KEsWckaLr~as 184 (608)
.+.|.++||.|.
T Consensus 234 ~~~Wi~aIr~a~ 245 (386)
T 3lju_X 234 IVDWFNALRAAR 245 (386)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhhhhcc
Confidence 999999999885
No 64
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=93.36 E-value=0.16 Score=52.04 Aligned_cols=86 Identities=8% Similarity=0.204 Sum_probs=59.5
Q ss_pred ceeeeEeeCceEEEecCCCC------eeEEecCCcEEEEEeCCCcccccc--ccccCeeEecCCcccccCceeEEEEecc
Q 007304 98 VRKYAKIKHRALILTSTDGS------QTSFPLKGCEIKAVSASSLSSRKW--AKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 98 ~~~~~~lk~~~L~l~~~dg~------~~~i~l~~C~v~avs~s~~~srKw--aKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
-+||++|+++.|+.+.-..+ +..+.|.||.|..|.+ ..+|. -+.|++.|-++.-. -....+-||-+|+
T Consensus 175 kkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~---~kkk~kaPt~~~F~ik~~~~~-~~~~~~~~~caed 250 (281)
T 4gmv_A 175 KKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQD---YRNKYKAPTDYCLVLKHPQIQ-KKSQYIKYLCCDD 250 (281)
T ss_dssp EEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESS---HHHHTCCSCSCEEEEECTTCC-SCCTTCEEEECSS
T ss_pred eEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecc---cccccCCCCCcEEEEecCccC-CCCCceEEEEeCC
Confidence 57899999999998854222 2345899999999864 11111 24778888765311 0123367888999
Q ss_pred chhHHHHHHHHHHHhccc
Q 007304 170 SWEKEAWCKALRLASCED 187 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~~ 187 (608)
-.+.+.|..|+|+|.-.+
T Consensus 251 e~~~~~Wv~Air~ak~g~ 268 (281)
T 4gmv_A 251 VRTLHQWVNGIRIAKYGK 268 (281)
T ss_dssp HHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHhhCc
Confidence 999999999999997764
No 65
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=91.37 E-value=0.17 Score=51.67 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=55.0
Q ss_pred eeeeEeeCceEEEecCCC---------CeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHRALILTSTDG---------SQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg---------~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+++|+|+|+.|++..... ....|.|.||.|..... -+. |+|-++|..+ ....+||=+++
T Consensus 41 k~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~d--~~k----Kk~vF~L~t~------~g~~yLFQA~s 108 (279)
T 3a8n_A 41 HYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPE--HPK----KDFVFCLSNS------LGDAFLFQTTS 108 (279)
T ss_dssp EEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCTT--SSS----SCSCCCEEET------TTEEEECCCSC
T ss_pred EEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEeccc--cCC----CCcEEEEEcC------CCCEEEEeCCC
Confidence 579999999999986532 13469999999984331 122 4556666533 45667888999
Q ss_pred chhHHHHHHHHHHHhc
Q 007304 170 SWEKEAWCKALRLASC 185 (608)
Q Consensus 170 ~~EKEsWckaLr~as~ 185 (608)
-=|-+.|.++|+.|+.
T Consensus 109 ~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 109 QTELENWITAIHSACA 124 (279)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998876
No 66
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.61 E-value=9.9 Score=34.85 Aligned_cols=107 Identities=21% Similarity=0.253 Sum_probs=65.7
Q ss_pred CCCCCCcCCCccchhHHhhhccceEEEeCCCCCCc-cccchHHHhhccceeeccceeeeEeeCce------EEEecC-C-
Q 007304 45 SSLDSSEVLDPQQSLEFAYKKQGYVWVLEPEKVPK-EKFSKEQKKKKEFLEVYPVRKYAKIKHRA------LILTST-D- 115 (608)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~wv~~~~~~~k-~k~~k~~k~~k~~~ev~p~~~~~~lk~~~------L~l~~~-d- 115 (608)
||..++++-| .-|||.+.+-..++.-| || |++++|-..+ |=+.|. +
T Consensus 2 ~~~~~~m~e~--------~vk~G~L~~q~q~~fgkKWr-----------------k~w~vLy~~S~~GvaRLE~yd~~ek 56 (127)
T 2d9w_A 2 SSGSSGMGDG--------AVKQGFLYLQQQQTFGKKWR-----------------RFGASLYGGSDCALARLELQEGPEK 56 (127)
T ss_dssp CSSCCCSCCC--------SSEEEEEEECBCSSSSCBCC-----------------EEEEEEECCSSSSCCEEEEECCCSC
T ss_pred CCccccccCc--------cccceEEEecccchhhhhhh-----------------eeEEEEecCCCCCceeeeeeeccCc
Confidence 3456667766 67899999888755554 42 1233332221 112222 1
Q ss_pred -----CCeeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 116 -----GSQTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 116 -----g~~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
....+|.|..|.=++=.+.....-| ..+...|+-++ ++++|++|+. |.+.|-.+|-..|=.
T Consensus 57 ~~r~~~~rrVIrLsdCisV~~~~~e~~~pk--~~~aF~l~T~e-------r~~~laAe~~-E~~~Wi~~ic~~aF~ 122 (127)
T 2d9w_A 57 PRRCEAARKVIRLSDCLRVAEAGGEASSPR--DTSAFFLETKE-------RLYLLAAPAA-ERGDWVQAICLLAFS 122 (127)
T ss_dssp SSSCSCCEEEECGGGEEEEEECCSCSSSCS--SCEEEEEEESS-------CEEEEEECHH-HHHHHHHHHHHHHTS
T ss_pred cccCCCCceEEEhhhCCeEecccCccCCCC--cceEEEEEeCC-------cEEEEEeCcH-HHHHHHHHHHHHhcC
Confidence 1247999999965443333222223 44777777444 8899999986 999999999876643
No 67
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=85.58 E-value=4.2 Score=35.72 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=56.1
Q ss_pred eeeEeeCceEEEecC----CCC---eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchh
Q 007304 100 KYAKIKHRALILTST----DGS---QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWE 172 (608)
Q Consensus 100 ~~~~lk~~~L~l~~~----dg~---~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~E 172 (608)
.|.-|=+..|++... .|. +..++|.+..|+-|..+. .-++-++|.. +.+.+.+++||.=|
T Consensus 28 v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~~~~v~d~~d~~------~~~n~f~i~~-------~~~s~~~~aes~~e 94 (113)
T 1zc3_B 28 VHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDNP------PMKDMFKLLM-------FPESRIFQAENAKI 94 (113)
T ss_dssp EEEEEESSEEEEEEEECCTTSCEEEEEEEETTTCEEEEECCBT------TBSSEEEEEE-------TTEEEEEECSSHHH
T ss_pred EEEEecCCEEEEEEEeccCcccEEEEEEEEcccCEEEECCCCc------ccceEEEEEe-------CCceEEEEcCCHHH
Confidence 367777888888766 232 346799999999986533 3577788874 34568999999999
Q ss_pred HHHHHHHHHHHhcc
Q 007304 173 KEAWCKALRLASCE 186 (608)
Q Consensus 173 KEsWckaLr~as~~ 186 (608)
|..|-.+||-|-.+
T Consensus 95 K~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 95 KREWLEVLEETKRA 108 (113)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988643
No 68
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=83.61 E-value=2.6 Score=42.48 Aligned_cols=84 Identities=17% Similarity=0.269 Sum_probs=58.2
Q ss_pred eeeeEeeCceEEEecCCCCe--e----EEecCCcEEEEEeCCCcccccc--ccccCeeEecCCcccccCce-eEEEEecc
Q 007304 99 RKYAKIKHRALILTSTDGSQ--T----SFPLKGCEIKAVSASSLSSRKW--AKRFPIKVENKSSVLYNGSK-LIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~~--~----~i~l~~C~v~avs~s~~~srKw--aKkfpIkve~~~~~iy~~sk-~~~~y~et 169 (608)
+||++|+++.|++.....+. . -+.|.+|.|..+.. ..+|. -+.|++.|-+... -++++ +.||=+|+
T Consensus 150 kRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~---~kKk~kaPt~~~F~ik~~k~--~~~~~~~~~lcaed 224 (256)
T 3hk0_A 150 KLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIA---GRKQYNAPTDHGLCIKPNKV--RNETKELRLLCAED 224 (256)
T ss_dssp EEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESS---THHHHCCSSSEEEEEEETTC--SSCCTTCEEEEESS
T ss_pred EEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecc---cccccCCCCCCEEEEEcccc--cCCCceEEEEEeCC
Confidence 58999999999998543221 1 25999999998875 11111 1256666664422 23333 46777999
Q ss_pred chhHHHHHHHHHHHhccc
Q 007304 170 SWEKEAWCKALRLASCED 187 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~~ 187 (608)
--|...|..|+|+|--..
T Consensus 225 e~~~~~W~~aIr~ak~g~ 242 (256)
T 3hk0_A 225 EQTRTSWMTAFRLLKYGM 242 (256)
T ss_dssp HHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHhhH
Confidence 999999999999997663
No 69
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=81.98 E-value=1.1 Score=34.23 Aligned_cols=29 Identities=21% Similarity=0.269 Sum_probs=16.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007304 4 FFVGLIIGAIGVVAVEAAAVLYFIYKLNQK 33 (608)
Q Consensus 4 ~~~~f~~g~~~l~~~e~~~~~~~~~rl~~~ 33 (608)
+..|.+.|+++++++ +++++|++||-+++
T Consensus 12 IA~gVVgGv~~v~ii-~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 12 IAAGVIGGLFILVIV-GLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHTTCSS
T ss_pred EEEeehHHHHHHHHH-HHHHHHHhhhhhhh
Confidence 445666666666554 35666666665433
No 70
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=81.32 E-value=1.2 Score=33.90 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=18.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 007304 4 FFVGLIIGAIGVVAVEAAAVLYFIYKLNQK 33 (608)
Q Consensus 4 ~~~~f~~g~~~l~~~e~~~~~~~~~rl~~~ 33 (608)
+.+|.+.|+++++++= ++++|++||-++|
T Consensus 13 IA~gVVgGv~~~~ii~-~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 13 IATGMVGALLLLLVVA-LGIGLFMRRRHIV 41 (44)
T ss_dssp STHHHHHHHHHHHHHH-HHHHHHHHTTTCC
T ss_pred EEeehhHHHHHHHHHH-HHHHHHhhhhHhh
Confidence 5567777777766553 6666666765533
No 71
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=79.67 E-value=3.1 Score=43.25 Aligned_cols=82 Identities=21% Similarity=0.428 Sum_probs=54.1
Q ss_pred eeeeEeeCceEEEecCCCC----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHH
Q 007304 99 RKYAKIKHRALILTSTDGS----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKE 174 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKE 174 (608)
.+|+-|=++.|+++..-|. ...|+|.+|.|..+........+|...|-|. +. .+.+.+.|+++|--||.
T Consensus 252 ~~~~fLF~d~Ll~~k~k~~~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~--~~-----~~~~~~~l~a~s~~ek~ 324 (406)
T 2vrw_B 252 DRYAFLLDKALLICKRRGDSYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLLI--ED-----QGAQGYELFFKTRELKK 324 (406)
T ss_dssp EEEEEEESSEEEEEEEETTEEEEEEEEETTTEEEEC--------CTTCEEEEEE--ET-----TCSCEEEEEESSHHHHH
T ss_pred eEEEEecCCEEEEEEecCCceEEEEEecccceeeeecCCCCccCCccceeeEEE--ec-----CCCceEEEeCCCHHHHH
Confidence 4567777777777765443 2578999999987766543444565444443 22 24567899999999999
Q ss_pred HHHHHHHHHhccc
Q 007304 175 AWCKALRLASCED 187 (608)
Q Consensus 175 sWckaLr~as~~~ 187 (608)
.|.++|+.|...-
T Consensus 325 ~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 325 KWMEQFEMAISNI 337 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999988763
No 72
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=79.26 E-value=2.9 Score=46.02 Aligned_cols=81 Identities=19% Similarity=0.374 Sum_probs=54.6
Q ss_pred eeeEeeCceEEEecCCCC----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHH
Q 007304 100 KYAKIKHRALILTSTDGS----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEA 175 (608)
Q Consensus 100 ~~~~lk~~~L~l~~~dg~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEs 175 (608)
+|+-|=++.|+++...|. ...|+|.+|.|.-+......+.+|. +.++|.+.. +.+.+.||+.|.-||..
T Consensus 425 r~~fLF~d~Ll~~k~~~~~y~~k~~i~L~~~~v~~~~~~~~~~~~~~--~~f~i~~~~-----~~~~~~L~A~S~eeK~~ 497 (587)
T 3ky9_A 425 RYAFLLDKALLICKRRGDSYDLKDFVNLHSFQVRDDSSGDRDNKKWS--HMFLLIEDQ-----GAQGYELFFKTRELKKK 497 (587)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEGGGEEEEEC-----CCCTTC--EEEEEEETT-----C---CEEEESSHHHHHH
T ss_pred EEEEEECCEEEEEEecCCEEEeeeeechhhceeeecCCCCccccccc--ceeEEEEcC-----CCceEEEEeCCHHHHHH
Confidence 567777777777655443 3688999999988765443344553 345666543 45788999999999999
Q ss_pred HHHHHHHHhccc
Q 007304 176 WCKALRLASCED 187 (608)
Q Consensus 176 WckaLr~as~~~ 187 (608)
|.++|+.|-..-
T Consensus 498 Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 498 WMEQFEMAISNI 509 (587)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh
Confidence 999999998763
No 73
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=78.80 E-value=6.8 Score=41.44 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=53.7
Q ss_pred eeeEeeCceEEEecCCC---C----eeEEecCCcEEEEEeCCCccccccc--cccCeeEecCCcccccCceeEEEEeccc
Q 007304 100 KYAKIKHRALILTSTDG---S----QTSFPLKGCEIKAVSASSLSSRKWA--KRFPIKVENKSSVLYNGSKLIYIFLETS 170 (608)
Q Consensus 100 ~~~~lk~~~L~l~~~dg---~----~~~i~l~~C~v~avs~s~~~srKwa--KkfpIkve~~~~~iy~~sk~~~~y~et~ 170 (608)
+|+-|=++.|+++.... . ...|+|.+|.|.-+.... ..+|+ -++.++|.++. +.+.+.|++.|-
T Consensus 353 r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~--~~~~~~~~~~~F~i~~~~-----~~~~~~l~a~s~ 425 (466)
T 2pz1_A 353 RMFFLFDHQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGK--DRDLHVSIKNAFRLHRGA-----TGDSHLLCTRKP 425 (466)
T ss_dssp EEEEEETTEEEEEEECSSCTTCEEEEEEEETTTCEEEECCSBS--CCSSCCCBCEEEEEECSS-----SCCEEEEEESSH
T ss_pred EEEEEECCEEEEEEeccccCCceEEeeeeeccceEEEeCCCCc--ccccccccceeEEEEeCC-----CCeEEEEEeCCH
Confidence 56666677776665432 1 257899999998776532 12232 23445555432 356788999999
Q ss_pred hhHHHHHHHHHHHhcc
Q 007304 171 WEKEAWCKALRLASCE 186 (608)
Q Consensus 171 ~EKEsWckaLr~as~~ 186 (608)
-||..|.++|+.|-..
T Consensus 426 ~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 426 EQKQRWLKAFAREREQ 441 (466)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998654
No 74
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=74.60 E-value=9 Score=38.84 Aligned_cols=75 Identities=12% Similarity=0.220 Sum_probs=52.8
Q ss_pred eeeeEeeCceEEEecCCC----------C----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEE
Q 007304 99 RKYAKIKHRALILTSTDG----------S----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIY 164 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg----------~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~ 164 (608)
.+|+-|=++.|+++...+ . ...|+|.+|.|..+..+. .| ++...|.++. .+.+.
T Consensus 261 ~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~~----~~--~~~F~i~~~~------~~~~~ 328 (354)
T 1dbh_A 261 ERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN----EY--KHAFEIILKD------ENSVI 328 (354)
T ss_dssp CEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCSS----SC--CSEEEECCTT------SCCEE
T ss_pred eEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCccc----cc--CccEEEecCC------CCEEE
Confidence 456777777777765542 1 258899999998876532 12 3344454332 36789
Q ss_pred EEeccchhHHHHHHHHHHHhc
Q 007304 165 IFLETSWEKEAWCKALRLASC 185 (608)
Q Consensus 165 ~y~et~~EKEsWckaLr~as~ 185 (608)
|++.|--||..|.++|+.|..
T Consensus 329 l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 329 FSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EECSSHHHHHHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHHHHHHHh
Confidence 999999999999999998865
No 75
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=74.00 E-value=7.4 Score=36.94 Aligned_cols=76 Identities=11% Similarity=0.195 Sum_probs=51.3
Q ss_pred eeeeEeeCceEEEecCCCC----------eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEec
Q 007304 99 RKYAKIKHRALILTSTDGS----------QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLE 168 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~dg~----------~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~e 168 (608)
-.||.|=+++|++.-.+|. ...|.|.+|.|.-+.... + .+-+.+.. -.|...+=||+.
T Consensus 88 d~~~fLf~D~Ll~~~~~~~ky~~~~~~~~~pvi~L~~~~vre~a~d~---~------~~fli~~~---~~g~~~yel~a~ 155 (185)
T 2lg1_A 88 EVQAVLLTDILVFLQEKDQKYIFASLDQKSTVISLKKLIVREVAHEE---K------GLFLISMG---MTDPEMVEVHAS 155 (185)
T ss_dssp EEEEEEESSEEECCEEETTEEECCCCSSSCSEEESSSCEEECCSSCS---S------EEEEECCS---SSCCCCEEEECS
T ss_pred eEEEEeecCEEEEEEecCCEEEEEcccCCCCeEeecceEEeccCCCC---C------eEEEEEec---CCCCeEEEEEcC
Confidence 4567777777766644332 135889999988776521 1 22233221 145667779999
Q ss_pred cchhHHHHHHHHHHHhcc
Q 007304 169 TSWEKEAWCKALRLASCE 186 (608)
Q Consensus 169 t~~EKEsWckaLr~as~~ 186 (608)
|.-|+.+||++++.|...
T Consensus 156 s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 156 SKEERNSWIQIIQDTINT 173 (185)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999876
No 76
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=73.80 E-value=8.2 Score=40.25 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=53.6
Q ss_pred eeeEeeCceEEEecCCC---C----eeEEecCCcEEEEEeCCCccccccc--cccCeeEecCCcccccCceeEEEEeccc
Q 007304 100 KYAKIKHRALILTSTDG---S----QTSFPLKGCEIKAVSASSLSSRKWA--KRFPIKVENKSSVLYNGSKLIYIFLETS 170 (608)
Q Consensus 100 ~~~~lk~~~L~l~~~dg---~----~~~i~l~~C~v~avs~s~~~srKwa--KkfpIkve~~~~~iy~~sk~~~~y~et~ 170 (608)
+|+-|=++.|+++.... . ...|+|.+|.|.-+.... .++|+ -++.++|.++. +.+.+.|++.|-
T Consensus 276 r~~fLF~d~Ll~~k~~~~~~~~~~~k~~i~l~~~~v~~~~d~~--~~~~~~~~~~~F~i~~~~-----~~~~~~l~a~s~ 348 (402)
T 2dfk_A 276 RVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGR--DDDFNVSMKNAFKLHNKE-----TEEVHLFFAKKL 348 (402)
T ss_dssp EEEEEETTEEEEEEECSSCTTCEEEEEEEEGGGEEEEECCSEE--CSSSCCEESSEEEEEESS-----SSCEEEEECSSH
T ss_pred EEEEeeCCEEEEEEeccccCCceEEeeeeeccceEEEecCCCC--ccccccccceeEEEEECC-----CCeEEEEEeCCH
Confidence 56677777777765431 1 257899999988765422 22332 23445555432 346788999999
Q ss_pred hhHHHHHHHHHHHhcc
Q 007304 171 WEKEAWCKALRLASCE 186 (608)
Q Consensus 171 ~EKEsWckaLr~as~~ 186 (608)
-||..|.++|+.|-..
T Consensus 349 ~eK~~Wi~~i~~a~~~ 364 (402)
T 2dfk_A 349 EEKIRWLRAFREERKM 364 (402)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987543
No 77
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=70.80 E-value=9.9 Score=38.40 Aligned_cols=83 Identities=13% Similarity=0.237 Sum_probs=53.8
Q ss_pred eeeeEeeCceEEEecC----CCC-----eeEEecCCcEEEEEeCCCccc---------cccccccCeeEecCCcccccCc
Q 007304 99 RKYAKIKHRALILTST----DGS-----QTSFPLKGCEIKAVSASSLSS---------RKWAKRFPIKVENKSSVLYNGS 160 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~----dg~-----~~~i~l~~C~v~avs~s~~~s---------rKwaKkfpIkve~~~~~iy~~s 160 (608)
.+|+-|=++.|+++.. |+. ...|+|.+|.|.-+....... .-..-++...|.+... ...
T Consensus 245 ~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~---~~~ 321 (346)
T 2z0q_A 245 KLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNG---SQS 321 (346)
T ss_dssp EEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCG---GGC
T ss_pred EEEEEECCCcEEEEEEeccCCceeeeeecCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecC---CCC
Confidence 4577777778777754 221 246899999998876432110 0122234445543221 235
Q ss_pred eeEEEEeccchhHHHHHHHHHHHh
Q 007304 161 KLIYIFLETSWEKEAWCKALRLAS 184 (608)
Q Consensus 161 k~~~~y~et~~EKEsWckaLr~as 184 (608)
+.+.|++.|--||..|+++|+.|-
T Consensus 322 ~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 322 QTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHhh
Confidence 788899999999999999999874
No 78
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=66.60 E-value=11 Score=38.83 Aligned_cols=56 Identities=18% Similarity=0.309 Sum_probs=41.3
Q ss_pred eEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 119 TSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 119 ~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
..|+|.+|.|.-+.... + .-|.|... .+|.+.+-|++.|--||..|+++|+.|...
T Consensus 315 ~~i~l~~~~v~~~~~d~---~---~~f~i~~~------~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~ 370 (385)
T 1txd_A 315 PVIKLSTVLVRQVATDN---K---ALFVISMS------DNGAQIYELVAQTVSEKTVWQDLICRMAAS 370 (385)
T ss_dssp SEEEGGGEEEEECCC-C---C---EEEEEEEC------SSCEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CceecccccccccccCC---c---eEEEEEEc------CCCceEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 57899999887765421 1 23555543 246678889999999999999999998765
No 79
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=65.88 E-value=16 Score=37.17 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=38.0
Q ss_pred eEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHHhc
Q 007304 119 TSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLASC 185 (608)
Q Consensus 119 ~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~as~ 185 (608)
..|+|.+|.|..+... + +.| .+.+.+ -+...+.+.|++.|.-||..|+++|+.|-.
T Consensus 311 ~~i~l~~~~v~~~~~~-----~--~~f--~i~~~~--~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 311 PVLKLNAVLIRSVATD-----K--RAF--FIICTS--KLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp SEEEGGGEEEEECSSC-----S--SEE--EEEECC--SSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEccceeeecccCC-----C--ceE--EEEEec--CCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 4789999988776431 1 112 222211 122357899999999999999999999864
No 80
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=64.58 E-value=10 Score=39.56 Aligned_cols=75 Identities=16% Similarity=0.299 Sum_probs=48.1
Q ss_pred eeeeEeeCceEEEecC--CCC---eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhH
Q 007304 99 RKYAKIKHRALILTST--DGS---QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEK 173 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg~---~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EK 173 (608)
.+|+-|=++.|+++.. ++. ...|+|.+|.|..... . ..+|.+.+.++ .+.+.|++.|.-||
T Consensus 260 ~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~l~v~~~~~---~----~~~~~f~i~~~-------~~~~~l~a~s~~ek 325 (434)
T 3mpx_A 260 PRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVM---E----KVPYALKIETS-------ESCLMLSASSCAER 325 (434)
T ss_dssp EEEEEEESSEEEEEEECTTSCEEEEEEEEC-----CCCCC---T----TSCSEEEEECS-------SCEEEEECSSHHHH
T ss_pred EEEEEEECCEEEEEEecCCCeEEEEEEEEcCCcEEEecCC---C----CCCeeEEEecC-------CeEEEEecCCHHHH
Confidence 3678888888888764 444 3678999998863222 1 24577777644 34699999999999
Q ss_pred HHHHHHHHHHhccc
Q 007304 174 EAWCKALRLASCED 187 (608)
Q Consensus 174 EsWckaLr~as~~~ 187 (608)
..|.++|+.|-.+.
T Consensus 326 ~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 326 DEWYGCLSRALPED 339 (434)
T ss_dssp HHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998774
No 81
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=63.51 E-value=4.5 Score=41.92 Aligned_cols=77 Identities=21% Similarity=0.296 Sum_probs=44.6
Q ss_pred eeeeEee-CceEEEecC-CCC--eeEEecCCcEE-----EEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIK-HRALILTST-DGS--QTSFPLKGCEI-----KAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk-~~~L~l~~~-dg~--~~~i~l~~C~v-----~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
+|+++|+ |+.|+-... ... ...|+|.+|+| ..... .+ --.|-|..-.....+ .++|++|+
T Consensus 24 ~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~----~~--~~~f~I~~~~~~~~~-----~r~~~~~~ 92 (446)
T 4ejn_A 24 PRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTER----PR--PNTFIIRCLQWTTVI-----ERTFHVET 92 (446)
T ss_dssp EEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECS----SS--TTEEEEEEEETTEEE-----EEEEECSS
T ss_pred ceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCC----CC--CceeEEEcCCCceee-----eeEEecCC
Confidence 4789997 666665544 222 35677777544 32221 11 113444322222222 34789999
Q ss_pred chhHHHHHHHHHHHhcc
Q 007304 170 SWEKEAWCKALRLASCE 186 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~ 186 (608)
.-|.|.|..|||.|...
T Consensus 93 ~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 93 PEEREEWTTAIQTVADG 109 (446)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 99999999999999775
No 82
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=50.05 E-value=10 Score=27.80 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=14.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q 007304 5 FVGLIIGAIGVVAVEAAAVLYFIY 28 (608)
Q Consensus 5 ~~~f~~g~~~l~~~e~~~~~~~~~ 28 (608)
++|.+.|.++-+++=+++++|+.|
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeeeehHHHHHHHHHHHHHHHHee
Confidence 467777776655554555555543
No 83
>3arc_X Photosystem II PSBX protein; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3prq_X* 3prr_X* 3kzi_X* 3a0b_X* 3a0h_X*
Probab=42.09 E-value=28 Score=25.94 Aligned_cols=25 Identities=40% Similarity=0.586 Sum_probs=18.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007304 3 SFFVGLIIGAIGVVAVEAAAVLYFIYK 29 (608)
Q Consensus 3 ~~~~~f~~g~~~l~~~e~~~~~~~~~r 29 (608)
.||.+++.|.+.+++ +.+++.++..
T Consensus 8 nFl~Sl~aG~vvvv~--i~~ali~VSq 32 (39)
T 3arc_X 8 GFFIGLLSGAVVLGL--TFAVLIAISQ 32 (39)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHheeEec
Confidence 388899999888887 6666666653
No 84
>2dw3_A Intrinsic membrane protein PUFX; quinone exchange, photosynthesis, light- harvesting, GXXXG motif, dimerization; NMR {Rhodobacter sphaeroides} PDB: 2ita_A
Probab=38.43 E-value=41 Score=28.39 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCC
Q 007304 6 VGLIIGAIGVVAVEAAAVLYFIYKLNQKTKKVASFSPSP 44 (608)
Q Consensus 6 ~~f~~g~~~l~~~e~~~~~~~~~rl~~~~~~~~~~~~~~ 44 (608)
++|..+++.++++=.++++|+|.++. -.+..+.|++
T Consensus 29 GAg~AAv~f~~~~~~lv~l~~iG~~L---PE~Sr~aP~P 64 (77)
T 2dw3_A 29 GAGWAGGVFFGTLLLIGFFRVVGRML---PIQENQAPAP 64 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCT---TTTCSSCSSC
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhC---chhcccCCCC
Confidence 56777888888888889999999998 4444444444
No 85
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=36.74 E-value=82 Score=37.33 Aligned_cols=99 Identities=11% Similarity=0.149 Sum_probs=64.9
Q ss_pred eeeeEeeCceEEEecCC-------C---C----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEE
Q 007304 99 RKYAKIKHRALILTSTD-------G---S----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIY 164 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~d-------g---~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~ 164 (608)
-+|+-|=++.|+++... | . ...|+|.+|.|.-+.... .-+|.+.+.+.+ ...+.
T Consensus 458 ~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~~------~~~~~F~I~~~~------~~~~~ 525 (1049)
T 3ksy_A 458 ERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN------EYKHAFEIILKD------ENSVI 525 (1049)
T ss_dssp CEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCSS------SCCSEEEECCTT------SCCEE
T ss_pred eEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCCc------cccceEEEEcCC------CCEEE
Confidence 46777778888777653 1 1 257889999876554422 234566666443 26889
Q ss_pred EEeccchhHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHhhhhccCCcccC
Q 007304 165 IFLETSWEKEAWCKALRLASCEDKKRLEWFTKLNEDFHIYLTTLVAGYPSFTK 217 (608)
Q Consensus 165 ~y~et~~EKEsWckaLr~as~~~k~~~~w~~kl~~~f~~y~~~l~~~~p~~~k 217 (608)
|++.|.-||..|.++|+.+-.. ..+.+....-+..-...||--++
T Consensus 526 L~A~S~eeK~~Wi~~I~~~q~k--------~~~~r~~~s~~~~~ek~~~l~~p 570 (1049)
T 3ksy_A 526 FSAKSAEEKNNWMAALISLQYR--------STLERMLDVTMLQEEKEEQMRLP 570 (1049)
T ss_dssp EECSSHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHSCCCCC
T ss_pred EeCCCHHHHHHHHHHHHHHHHH--------HHHHHHhhhhhhccccccccCCC
Confidence 9999999999999999976543 23333344444445666775555
No 86
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=35.62 E-value=18 Score=34.92 Aligned_cols=48 Identities=19% Similarity=0.195 Sum_probs=33.7
Q ss_pred CcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEeccchhHHHHHHHHHHH
Q 007304 125 GCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAWCKALRLA 183 (608)
Q Consensus 125 ~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsWckaLr~a 183 (608)
.+.|.+|+++..++ +... -+|....+++||.+||.-|++.|+.+|..|
T Consensus 180 ~~~i~s~~~~~~~~----~~~~-------f~iit~~r~~~~~a~s~~e~~~Wi~~lq~~ 227 (228)
T 3tfm_A 180 VGLIDSVCASDSPD----RPNS-------FVIITANRVLHCNADTPEEMHHWITLLQRS 227 (228)
T ss_dssp GGGEEEEEECCCSS----CTTE-------EEEEETTEEEEEECSSHHHHHHHHHHHCSC
T ss_pred hhheeccccCCCCC----CCCc-------EEEEeCCceEEEEcCCHHHHHHHHHHHhhc
Confidence 35566666655443 2222 233556899999999999999999998643
No 87
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=35.08 E-value=94 Score=31.56 Aligned_cols=78 Identities=12% Similarity=0.183 Sum_probs=51.8
Q ss_pred eeeeEeeCceEEEecC--CC----C------eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEE
Q 007304 99 RKYAKIKHRALILTST--DG----S------QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIF 166 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--dg----~------~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y 166 (608)
.+|+-|=++.|+++.. +| + ...|+|..|.|.-..... ...|-|....++ .+.+.+.|+
T Consensus 230 ~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~~------~~~F~i~~~~~~----~~~~~~~l~ 299 (354)
T 2rgn_B 230 ERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQGD------PCRFALTSRGPE----GGIQRYVLQ 299 (354)
T ss_dssp EEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGGGC------TTEEEEEEECSS----SCEEEEEEE
T ss_pred eEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccCCC------CceEEEEecCCC----CCceEEEEE
Confidence 3688888888888754 11 1 246889888876432111 134555443222 245788999
Q ss_pred eccchhHHHHHHHHHHHhcc
Q 007304 167 LETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 167 ~et~~EKEsWckaLr~as~~ 186 (608)
+.|.-||..|.++|+.|-..
T Consensus 300 a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 300 AADPAISQAWIKHVAQILES 319 (354)
T ss_dssp ESSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998755
No 88
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=34.74 E-value=37 Score=25.78 Aligned_cols=27 Identities=19% Similarity=0.341 Sum_probs=14.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007304 5 FVGLIIGAIGVVAVEAAAVLYFIYKLNQ 32 (608)
Q Consensus 5 ~~~f~~g~~~l~~~e~~~~~~~~~rl~~ 32 (608)
+++-+.|+| ++++=++++++++||=++
T Consensus 14 Ia~~vVGvl-l~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGIL-LVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHH-HHHHHHHHHHhheehhhh
Confidence 456666744 444445555556665443
No 89
>3bz1_X Photosystem II PSBX protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 1s5l_X* 3bz2_X*
Probab=34.19 E-value=35 Score=26.62 Aligned_cols=24 Identities=42% Similarity=0.589 Sum_probs=18.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHH
Q 007304 3 SFFVGLIIGAIGVVAVEAAAVLYFIY 28 (608)
Q Consensus 3 ~~~~~f~~g~~~l~~~e~~~~~~~~~ 28 (608)
.|+.+++.|.+.+++ +.+++.++.
T Consensus 18 NFl~SlvaG~vVvv~--i~~aLi~VS 41 (50)
T 3bz1_X 18 GFFIGLLSGAVVLGL--TFAVLIAIS 41 (50)
T ss_dssp HHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HHHHheeee
Confidence 388899999888887 666666664
No 90
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=33.58 E-value=1.2e+02 Score=31.13 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=48.5
Q ss_pred eeeeEeeCceEEEecC-CC-----------------C---eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccc
Q 007304 99 RKYAKIKHRALILTST-DG-----------------S---QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLY 157 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~-dg-----------------~---~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy 157 (608)
-+|+-|=++.|+++.. |+ . ...|+|.+|.|.-|... .+ .| .+-+.. .
T Consensus 312 ~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~---~~----~f--~l~~~~---~ 379 (418)
T 3t06_A 312 DLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATD---KR----AF--FIICTS---K 379 (418)
T ss_dssp EEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSSC---SS----EE--EEEECC---S
T ss_pred EEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccccc---Cc----eE--EEEecC---C
Confidence 3667777777766643 21 1 14678888888765432 11 22 222211 2
Q ss_pred cCc-eeEEEEeccchhHHHHHHHHHHHhcc
Q 007304 158 NGS-KLIYIFLETSWEKEAWCKALRLASCE 186 (608)
Q Consensus 158 ~~s-k~~~~y~et~~EKEsWckaLr~as~~ 186 (608)
+|. ..+.|++.|--||..|.++|+.|..+
T Consensus 380 ~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 380 LGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp SSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 233 67889999999999999999999876
No 91
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=33.27 E-value=86 Score=31.05 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=49.9
Q ss_pred eeeeEeeCceEEEecC--C--CC-----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeEEEEecc
Q 007304 99 RKYAKIKHRALILTST--D--GS-----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLIYIFLET 169 (608)
Q Consensus 99 ~~~~~lk~~~L~l~~~--d--g~-----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~~~y~et 169 (608)
-+|+-|=++.|+++.. + |. ...|+|.+|.|.-+.... ...|-|...+. -...+.+.|++.|
T Consensus 223 ~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~------~~~F~i~~~~~----~~~~~~~~l~a~s 292 (311)
T 1nty_A 223 ERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHVEGD------PCKFALWVGRT----PTSDNKIVLKASS 292 (311)
T ss_dssp EEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCCTTC------TTEEEEEESSS----CCTTTCEEEECSS
T ss_pred eeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEccCCC------CceEEEEeCCC----CCCCceEEEECCC
Confidence 4577777777777643 2 11 246889999887543321 12344444211 0134567899999
Q ss_pred chhHHHHHHHHHHHhcc
Q 007304 170 SWEKEAWCKALRLASCE 186 (608)
Q Consensus 170 ~~EKEsWckaLr~as~~ 186 (608)
--||..|.++|+.|-.+
T Consensus 293 ~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 293 IENKQDWIKHIREVIQE 309 (311)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988653
No 92
>2ypj_A Eccel5A, endoglucanase CEL5A; hydrolase, cellulase, xyloglucan, ITC; HET: BGC; 2.35A {Eubacterium cellulosolvens}
Probab=29.44 E-value=9.7 Score=34.58 Aligned_cols=27 Identities=48% Similarity=1.173 Sum_probs=24.2
Q ss_pred ccccCeeEecCCcccccCceeEEEEeccchhHHHH
Q 007304 142 AKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAW 176 (608)
Q Consensus 142 aKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsW 176 (608)
.|.|-|||. |+|..+++||+. |||.-|
T Consensus 67 nknfeikvd------y~gadivlifar--w~~~iw 93 (155)
T 2ypj_A 67 NKNFEIKVD------YNGADIVLIFAR--WDKDIW 93 (155)
T ss_dssp TSCEEEEEE------EEESCEEEEEEE--TTTTEE
T ss_pred CcCeEEEEe------cCCCcEEEEEee--cChhhh
Confidence 799999999 999999999986 887666
No 93
>4ba6_A Endoglucanase CEL5A; carbohydrate-binding protein, plant cell WALL degradation, beta-jelly roll; 1.42A {Eubacterium cellulosolvens}
Probab=28.09 E-value=11 Score=34.00 Aligned_cols=27 Identities=48% Similarity=1.173 Sum_probs=24.1
Q ss_pred ccccCeeEecCCcccccCceeEEEEeccchhHHHH
Q 007304 142 AKRFPIKVENKSSVLYNGSKLIYIFLETSWEKEAW 176 (608)
Q Consensus 142 aKkfpIkve~~~~~iy~~sk~~~~y~et~~EKEsW 176 (608)
.|.|-|||. |+|..+++||+. |||.-|
T Consensus 48 nknfeikvd------y~gadivlifar--w~~~iw 74 (144)
T 4ba6_A 48 NKNFEIKVD------YNGADIVLIFAR--WDKDIW 74 (144)
T ss_dssp TSCEEEEEE------EEESCEEEEEEE--TTTTEE
T ss_pred CcCeEEEEe------cCCCcEEEEEee--cChhhh
Confidence 799999999 999999999986 887666
No 94
>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}
Probab=27.00 E-value=1e+02 Score=32.88 Aligned_cols=47 Identities=17% Similarity=0.177 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCceEEEEeecCCCCceeecccccccC
Q 007304 367 GVKSSIQARIQRALSNMRTPSYIGEIICTDIDTGNLPPYVHGMRVLPTD 415 (608)
Q Consensus 367 ~~~~~I~~KIQkKLskIklPsFI~eI~VteLDLG~s~P~I~~vr~p~lD 415 (608)
|.++.....||++|.++.+|.+-+++.+.- +|.--=-|+++++-.++
T Consensus 22 y~~~~~~~~lq~~l~~i~iPdi~g~~~i~~--~G~~~y~ls~ikI~~~~ 68 (476)
T 2obd_A 22 VLNHETAKVIQTAFQRASYPDITGEKAMML--LGQVKYGLHNIQISHLS 68 (476)
T ss_dssp HHGGGHHHHHHHHHHHCCCCCEEEEEEETT--TEEEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCceeccc--cceEEEEEEEEEEEEEE
Confidence 455667788999999999999876655431 12211125566555443
No 95
>2nrg_A Intrinsic membrane protein PUFX; BENT transmembrane helix, photosynthesis,membrane protein; NMR {Rhodobacter sphaeroides}
Probab=26.49 E-value=64 Score=27.47 Aligned_cols=36 Identities=8% Similarity=0.036 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccCCCCC
Q 007304 6 VGLIIGAIGVVAVEAAAVLYFIYKLNQKTKKVASFSPSP 44 (608)
Q Consensus 6 ~~f~~g~~~l~~~e~~~~~~~~~rl~~~~~~~~~~~~~~ 44 (608)
++|..+++.++.+=.++++|+|.++. -.+..+.|++
T Consensus 30 GAG~AAv~fl~~~~~lv~l~~iG~~L---PE~Sr~aP~P 65 (82)
T 2nrg_A 30 GAGWAGGVFFGTLLLIGFFRVVGRML---PIQENQAPAP 65 (82)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHSS---TTTTTCCSSS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhC---chhcccCCCC
Confidence 56677777777788888999999998 3344444443
No 96
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=24.24 E-value=1.4e+02 Score=30.18 Aligned_cols=78 Identities=19% Similarity=0.317 Sum_probs=50.9
Q ss_pred cceeeeEeeCceEEEecCC---C------C----eeEEecCCcEEEEEeCCCccccccccccCeeEecCCcccccCceeE
Q 007304 97 PVRKYAKIKHRALILTSTD---G------S----QTSFPLKGCEIKAVSASSLSSRKWAKRFPIKVENKSSVLYNGSKLI 163 (608)
Q Consensus 97 p~~~~~~lk~~~L~l~~~d---g------~----~~~i~l~~C~v~avs~s~~~srKwaKkfpIkve~~~~~iy~~sk~~ 163 (608)
+.-+|+-|=++.|+++... | . ...|+|.+|.|.-+.... ...|-|... .+.+.+
T Consensus 237 ~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~~------~~~F~i~~~-------~~~~~~ 303 (353)
T 1kz7_A 237 PMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKGD------TKKFEIWYN-------AREEVY 303 (353)
T ss_dssp CEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTTB------TTEEEEEET-------TTTEEE
T ss_pred cceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCCCC------CceEEEEEC-------CCCcEE
Confidence 3456777777777776541 2 1 146788888775432211 123444322 134678
Q ss_pred EEEeccchhHHHHHHHHHHHhccc
Q 007304 164 YIFLETSWEKEAWCKALRLASCED 187 (608)
Q Consensus 164 ~~y~et~~EKEsWckaLr~as~~~ 187 (608)
.|++.|--||..|.++|+.|-...
T Consensus 304 ~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 304 IIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999987763
No 97
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=22.93 E-value=87 Score=22.28 Aligned_cols=23 Identities=22% Similarity=0.561 Sum_probs=16.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 007304 4 FFVGLIIGAIGVVAVEAAAVLYF 26 (608)
Q Consensus 4 ~~~~f~~g~~~l~~~e~~~~~~~ 26 (608)
-+.|++.|-++..+.=++++||+
T Consensus 8 aIaGIVvgdi~~t~~i~~~vy~~ 30 (33)
T 2l34_A 8 VLAGIVVGDLVLTVLIALAVYFL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeEeHHHHHHHHHHHHHHhhe
Confidence 46788888888877766666664
No 98
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=22.33 E-value=85 Score=23.74 Aligned_cols=16 Identities=38% Similarity=0.648 Sum_probs=11.8
Q ss_pred hhHHHHHHHHHHHHHH
Q 007304 5 FVGLIIGAIGVVAVEA 20 (608)
Q Consensus 5 ~~~f~~g~~~l~~~e~ 20 (608)
+.|.+.|+|++.+|-.
T Consensus 22 i~~~IVGaLvil~VAG 37 (46)
T 1pfi_A 22 IGGYIVGALVILAVAG 37 (46)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5688889888877643
No 99
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=20.13 E-value=1.1e+02 Score=22.55 Aligned_cols=25 Identities=16% Similarity=0.425 Sum_probs=19.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHH
Q 007304 3 SFFVGLIIGAIGVVAVEAAAVLYFI 27 (608)
Q Consensus 3 ~~~~~f~~g~~~l~~~e~~~~~~~~ 27 (608)
++|.|.++|++.+.++-....-|+=
T Consensus 4 ~lL~GIVlGlipvtlaGLfv~Ay~Q 28 (37)
T 1q90_G 4 PLLCGIVLGLVPVTIAGLFVTAYLQ 28 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHhhHHHHHHHHHHHHHHH
Confidence 3789999999988887666665554
Done!