Query 007311
Match_columns 608
No_of_seqs 533 out of 3402
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 21:51:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007311hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1054 Predicted sulfurtransf 100.0 1.2E-78 2.6E-83 602.4 19.6 278 9-327 3-282 (308)
2 PRK00142 putative rhodanese-re 100.0 1.1E-65 2.3E-70 534.6 25.7 287 10-327 3-290 (314)
3 PRK01415 hypothetical protein; 100.0 2.6E-64 5.6E-69 502.6 24.2 234 9-273 3-237 (247)
4 PRK05320 rhodanese superfamily 100.0 4E-61 8.6E-66 487.0 23.7 253 10-288 2-255 (257)
5 KOG2551 Phospholipase/carboxyh 100.0 2.5E-33 5.5E-38 269.1 17.9 212 370-608 3-221 (230)
6 PF03959 FSH1: Serine hydrolas 100.0 1.2E-31 2.5E-36 266.1 14.2 202 371-600 3-212 (212)
7 PF02230 Abhydrolase_2: Phosph 99.9 9.6E-22 2.1E-26 195.4 18.5 193 368-608 10-216 (216)
8 COG0400 Predicted esterase [Ge 99.9 1.9E-21 4.1E-26 190.7 17.0 186 370-608 16-206 (207)
9 cd01518 RHOD_YceA Member of th 99.8 3.6E-20 7.8E-25 161.8 8.9 101 129-248 1-101 (101)
10 PRK11460 putative hydrolase; P 99.8 1.1E-18 2.4E-23 175.6 19.0 186 370-608 14-209 (232)
11 cd01523 RHOD_Lact_B Member of 99.7 8.9E-17 1.9E-21 140.0 9.7 94 132-247 1-99 (100)
12 cd01533 4RHOD_Repeat_2 Member 99.7 1.7E-16 3.8E-21 140.5 9.5 99 129-249 9-108 (109)
13 cd01528 RHOD_2 Member of the R 99.7 3.8E-16 8.2E-21 136.3 9.1 99 132-250 2-100 (101)
14 KOG2112 Lysophospholipase [Lip 99.6 2.9E-15 6.4E-20 143.9 15.6 188 371-606 2-203 (206)
15 cd01526 RHOD_ThiF Member of th 99.6 4.4E-16 9.6E-21 140.9 9.4 104 128-252 6-117 (122)
16 cd01534 4RHOD_Repeat_3 Member 99.6 6.2E-16 1.3E-20 133.5 8.6 94 132-247 1-94 (95)
17 cd01522 RHOD_1 Member of the R 99.6 1.3E-15 2.8E-20 136.8 8.6 99 132-250 1-106 (117)
18 cd01520 RHOD_YbbB Member of th 99.6 2.8E-15 6E-20 136.9 10.1 97 132-249 1-127 (128)
19 PRK00162 glpE thiosulfate sulf 99.6 2.7E-15 5.9E-20 132.6 9.5 97 129-250 4-100 (108)
20 cd01444 GlpE_ST GlpE sulfurtra 99.6 2.3E-15 5E-20 129.7 8.5 93 131-247 1-95 (96)
21 TIGR02240 PHA_depoly_arom poly 99.6 5.1E-14 1.1E-18 144.6 18.2 168 373-606 26-265 (276)
22 cd01525 RHOD_Kc Member of the 99.6 5.4E-15 1.2E-19 129.7 9.3 97 132-247 1-104 (105)
23 cd01519 RHOD_HSP67B2 Member of 99.6 2.9E-15 6.3E-20 131.6 7.1 96 133-247 2-105 (106)
24 PLN02160 thiosulfate sulfurtra 99.6 8.7E-15 1.9E-19 135.0 10.5 103 129-249 14-122 (136)
25 cd01530 Cdc25 Cdc25 phosphatas 99.6 3.6E-15 7.7E-20 134.8 7.6 105 131-248 3-121 (121)
26 cd01531 Acr2p Eukaryotic arsen 99.6 8.3E-15 1.8E-19 130.7 9.3 104 130-249 2-112 (113)
27 cd01527 RHOD_YgaP Member of th 99.6 1.2E-14 2.5E-19 126.3 9.0 93 131-249 3-95 (99)
28 cd01529 4RHOD_Repeats Member o 99.6 1E-14 2.3E-19 126.0 8.4 85 157-247 11-95 (96)
29 TIGR03611 RutD pyrimidine util 99.5 1.9E-13 4.1E-18 136.3 17.9 171 371-605 12-256 (257)
30 KOG1530 Rhodanese-related sulf 99.5 2E-14 4.3E-19 127.2 8.4 103 129-250 22-131 (136)
31 cd01524 RHOD_Pyr_redox Member 99.5 2.3E-14 5E-19 122.4 8.0 89 132-247 1-89 (90)
32 cd01443 Cdc25_Acr2p Cdc25 enzy 99.5 2.9E-14 6.3E-19 127.2 8.3 103 130-247 2-112 (113)
33 cd01447 Polysulfide_ST Polysul 99.5 3.1E-14 6.7E-19 124.2 8.2 95 132-248 1-101 (103)
34 COG1647 Esterase/lipase [Gener 99.5 2E-13 4.4E-18 131.8 14.2 171 373-605 16-242 (243)
35 PRK10673 acyl-CoA esterase; Pr 99.5 7.8E-13 1.7E-17 133.3 19.1 171 370-606 14-254 (255)
36 COG3208 GrsT Predicted thioest 99.5 8.9E-13 1.9E-17 130.0 18.6 172 370-606 5-231 (244)
37 TIGR03865 PQQ_CXXCW PQQ-depend 99.5 7.6E-14 1.6E-18 132.5 10.7 104 127-249 33-158 (162)
38 PHA02857 monoglyceride lipase; 99.5 1E-12 2.3E-17 134.6 19.6 173 370-606 23-272 (276)
39 cd01449 TST_Repeat_2 Thiosulfa 99.5 2.9E-14 6.2E-19 127.8 7.0 97 132-247 1-117 (118)
40 PLN02824 hydrolase, alpha/beta 99.5 6.8E-13 1.5E-17 137.5 18.0 174 373-606 30-293 (294)
41 PLN02965 Probable pheophorbida 99.5 1.3E-12 2.9E-17 132.6 18.8 169 374-606 5-252 (255)
42 PF00581 Rhodanese: Rhodanese- 99.5 1.3E-13 2.7E-18 121.7 9.6 98 133-249 1-113 (113)
43 TIGR01738 bioH putative pimelo 99.5 1.3E-12 2.9E-17 128.7 17.0 163 373-607 5-244 (245)
44 PLN02385 hydrolase; alpha/beta 99.5 1.7E-12 3.8E-17 138.3 18.7 63 542-607 276-345 (349)
45 PRK10349 carboxylesterase BioH 99.5 1.3E-12 2.9E-17 132.3 16.7 163 373-605 14-254 (256)
46 smart00450 RHOD Rhodanese Homo 99.5 1.1E-13 2.4E-18 118.7 7.3 88 157-250 3-98 (100)
47 TIGR02427 protocat_pcaD 3-oxoa 99.5 1.4E-12 2.9E-17 128.9 16.1 169 371-607 12-249 (251)
48 cd01521 RHOD_PspE2 Member of t 99.5 2.4E-13 5.3E-18 120.6 9.1 98 129-249 7-106 (110)
49 COG0607 PspE Rhodanese-related 99.4 1.9E-13 4.1E-18 120.5 8.1 85 157-250 19-103 (110)
50 cd01448 TST_Repeat_1 Thiosulfa 99.4 2.6E-13 5.6E-18 122.5 9.1 103 132-249 2-121 (122)
51 TIGR03056 bchO_mg_che_rel puta 99.4 5.5E-12 1.2E-16 128.2 19.7 168 372-604 28-277 (278)
52 PLN02578 hydrolase 99.4 3.9E-12 8.5E-17 135.9 18.8 59 542-605 293-353 (354)
53 TIGR03343 biphenyl_bphD 2-hydr 99.4 4.6E-12 9.9E-17 129.8 17.8 173 373-605 31-281 (282)
54 PRK10566 esterase; Provisional 99.4 2.9E-12 6.2E-17 129.3 16.0 185 370-608 25-249 (249)
55 PF12695 Abhydrolase_5: Alpha/ 99.4 3.9E-12 8.4E-17 116.8 15.1 143 374-589 1-145 (145)
56 PLN02298 hydrolase, alpha/beta 99.4 4.7E-12 1E-16 133.7 17.0 106 494-607 135-317 (330)
57 cd01532 4RHOD_Repeat_1 Member 99.4 4.4E-13 9.5E-18 115.1 7.3 81 157-247 9-91 (92)
58 PRK03592 haloalkane dehalogena 99.4 1.1E-11 2.3E-16 128.6 18.6 171 372-607 27-289 (295)
59 PLN02679 hydrolase, alpha/beta 99.4 8.3E-12 1.8E-16 133.8 18.3 171 372-606 88-356 (360)
60 PRK00870 haloalkane dehalogena 99.4 1.2E-11 2.6E-16 128.9 17.9 172 372-606 46-300 (302)
61 PRK11126 2-succinyl-6-hydroxy- 99.4 1.9E-11 4.1E-16 122.3 18.1 98 372-532 2-101 (242)
62 TIGR02981 phageshock_pspE phag 99.4 7.6E-13 1.7E-17 115.6 6.8 80 157-247 17-96 (101)
63 PRK07878 molybdopterin biosynt 99.4 1.3E-12 2.9E-17 141.1 10.1 102 128-251 285-386 (392)
64 PRK11071 esterase YqiA; Provis 99.4 1.4E-11 3.1E-16 120.2 16.0 155 373-605 2-189 (190)
65 cd00158 RHOD Rhodanese Homolog 99.4 1.6E-12 3.5E-17 109.6 7.5 81 157-247 9-89 (89)
66 PRK07411 hypothetical protein; 99.4 1.8E-12 3.9E-17 139.9 9.3 105 129-252 281-385 (390)
67 PF12697 Abhydrolase_6: Alpha/ 99.3 1.1E-11 2.3E-16 120.1 13.9 162 375-602 1-227 (228)
68 PRK13604 luxD acyl transferase 99.3 5.7E-11 1.2E-15 122.9 19.1 173 369-605 34-257 (307)
69 PRK10287 thiosulfate:cyanide s 99.3 1.9E-12 4.1E-17 113.7 6.8 80 157-247 19-98 (104)
70 PRK08762 molybdopterin biosynt 99.3 2.2E-12 4.7E-17 139.0 8.7 96 130-249 3-98 (376)
71 TIGR03695 menH_SHCHC 2-succiny 99.3 6.5E-11 1.4E-15 116.4 18.6 167 373-604 2-250 (251)
72 PLN03087 BODYGUARD 1 domain co 99.3 5.4E-11 1.2E-15 131.1 19.6 175 371-606 200-478 (481)
73 PRK05600 thiamine biosynthesis 99.3 2.7E-12 5.8E-17 137.4 8.8 99 129-244 270-369 (370)
74 PLN02211 methyl indole-3-aceta 99.3 7.1E-11 1.5E-15 121.7 18.9 159 370-593 16-254 (273)
75 PRK06489 hypothetical protein; 99.3 6.1E-11 1.3E-15 127.0 18.3 60 542-606 289-356 (360)
76 KOG1552 Predicted alpha/beta h 99.3 5.2E-11 1.1E-15 118.4 15.7 125 472-607 110-252 (258)
77 cd01535 4RHOD_Repeat_4 Member 99.3 4.5E-12 9.7E-17 118.2 7.7 81 157-249 10-90 (145)
78 PRK14875 acetoin dehydrogenase 99.3 6.4E-11 1.4E-15 126.5 17.2 165 372-605 131-369 (371)
79 PRK10749 lysophospholipase L2; 99.3 1.3E-10 2.9E-15 122.9 19.3 177 372-606 54-328 (330)
80 PRK03204 haloalkane dehalogena 99.3 1E-10 2.3E-15 121.2 17.9 168 372-604 34-285 (286)
81 PLN02652 hydrolase; alpha/beta 99.3 1.2E-10 2.5E-15 126.3 18.8 181 371-607 135-387 (395)
82 TIGR01250 pro_imino_pep_2 prol 99.3 3.4E-10 7.4E-15 114.4 19.2 56 543-604 229-287 (288)
83 PLN02894 hydrolase, alpha/beta 99.2 3.3E-10 7.2E-15 123.2 19.9 63 542-608 322-386 (402)
84 PLN03084 alpha/beta hydrolase 99.2 3.9E-10 8.6E-15 121.6 19.9 171 372-605 127-382 (383)
85 PRK05597 molybdopterin biosynt 99.2 1.5E-11 3.3E-16 131.2 8.7 94 130-248 261-354 (355)
86 TIGR01840 esterase_phb esteras 99.2 1.7E-10 3.6E-15 114.3 15.0 159 370-576 11-196 (212)
87 PRK00175 metX homoserine O-ace 99.2 2.7E-10 5.9E-15 123.0 17.7 62 542-606 306-373 (379)
88 cd01446 DSP_MapKP N-terminal r 99.2 4.9E-11 1.1E-15 109.3 10.2 110 132-252 2-130 (132)
89 TIGR02821 fghA_ester_D S-formy 99.2 1.1E-09 2.3E-14 113.1 20.3 199 371-608 41-275 (275)
90 KOG1454 Predicted hydrolase/ac 99.2 3.1E-10 6.6E-15 119.9 16.4 176 370-607 56-324 (326)
91 PRK05077 frsA fermentation/res 99.2 9.4E-10 2E-14 120.1 20.1 106 493-608 265-413 (414)
92 PRK11784 tRNA 2-selenouridine 99.2 4.5E-11 9.8E-16 126.4 9.5 97 133-250 4-130 (345)
93 TIGR01392 homoserO_Ac_trn homo 99.2 3.9E-10 8.5E-15 120.3 16.6 59 543-604 286-350 (351)
94 PLN02980 2-oxoglutarate decarb 99.2 4.4E-10 9.6E-15 140.7 18.5 179 371-606 1370-1638(1655)
95 KOG1455 Lysophospholipase [Lip 99.2 7.1E-10 1.5E-14 112.5 16.3 181 369-607 51-312 (313)
96 TIGR03167 tRNA_sel_U_synt tRNA 99.2 5.4E-11 1.2E-15 124.2 8.2 86 158-250 2-116 (311)
97 KOG4178 Soluble epoxide hydrol 99.1 3.1E-09 6.7E-14 109.3 18.4 177 370-607 42-320 (322)
98 PRK08775 homoserine O-acetyltr 99.1 1.3E-09 2.8E-14 116.0 14.5 61 542-606 274-338 (343)
99 PRK11493 sseA 3-mercaptopyruva 99.1 3E-10 6.5E-15 117.7 9.2 101 130-249 5-129 (281)
100 PRK09629 bifunctional thiosulf 99.1 2.3E-10 5E-15 129.8 8.6 104 130-249 9-123 (610)
101 PRK07581 hypothetical protein; 99.1 2.2E-09 4.7E-14 113.9 15.6 61 543-608 273-337 (339)
102 KOG2017 Molybdopterin synthase 99.1 4.4E-10 9.5E-15 114.6 9.4 181 34-252 221-422 (427)
103 cd01445 TST_Repeats Thiosulfat 99.1 3.9E-10 8.4E-15 104.3 8.1 105 132-247 1-137 (138)
104 PF05728 UPF0227: Uncharacteri 99.1 6.4E-09 1.4E-13 101.0 16.7 112 478-604 43-186 (187)
105 TIGR01249 pro_imino_pep_1 prol 99.1 6.2E-09 1.3E-13 108.9 17.8 58 545-608 248-306 (306)
106 PLN02442 S-formylglutathione h 99.1 1E-08 2.2E-13 106.4 19.2 202 370-607 45-280 (283)
107 PRK05855 short chain dehydroge 99.1 2.2E-09 4.8E-14 121.4 15.5 59 543-606 231-291 (582)
108 PF01738 DLH: Dienelactone hyd 99.0 8.6E-10 1.9E-14 109.5 9.9 107 493-608 98-218 (218)
109 KOG4409 Predicted hydrolase/ac 99.0 6.3E-09 1.4E-13 107.5 15.9 177 370-607 88-364 (365)
110 PLN02723 3-mercaptopyruvate su 99.0 1.1E-09 2.5E-14 115.4 10.1 102 129-249 21-145 (320)
111 PLN02511 hydrolase 99.0 6.5E-09 1.4E-13 112.6 16.2 61 542-607 295-365 (388)
112 PLN02723 3-mercaptopyruvate su 99.0 9.6E-10 2.1E-14 115.9 8.1 101 130-249 190-310 (320)
113 PRK10985 putative hydrolase; P 99.0 2.5E-08 5.4E-13 105.3 18.2 61 542-607 252-320 (324)
114 PF00326 Peptidase_S9: Prolyl 98.9 6.5E-09 1.4E-13 102.7 12.3 126 475-608 46-210 (213)
115 TIGR01607 PST-A Plasmodium sub 98.9 2.3E-08 5E-13 106.1 17.2 58 545-605 270-331 (332)
116 PF10503 Esterase_phd: Esteras 98.9 2.1E-08 4.6E-13 99.7 15.6 156 371-576 15-197 (220)
117 PF00975 Thioesterase: Thioest 98.9 3.1E-08 6.7E-13 98.6 16.5 170 374-608 2-229 (229)
118 COG2267 PldB Lysophospholipase 98.9 5.9E-08 1.3E-12 101.4 18.4 175 373-606 35-293 (298)
119 PRK11493 sseA 3-mercaptopyruva 98.9 3E-09 6.5E-14 110.2 8.1 86 157-248 167-271 (281)
120 PF06821 Ser_hydrolase: Serine 98.9 3.3E-08 7.1E-13 94.8 14.3 115 482-605 44-170 (171)
121 PLN00021 chlorophyllase 98.9 3.3E-08 7.2E-13 103.9 15.0 161 370-589 50-240 (313)
122 PRK09629 bifunctional thiosulf 98.8 4.9E-09 1.1E-13 119.0 8.0 104 130-249 147-264 (610)
123 COG0412 Dienelactone hydrolase 98.8 1E-07 2.2E-12 96.2 16.2 190 373-608 28-234 (236)
124 COG1506 DAP2 Dipeptidyl aminop 98.8 7E-08 1.5E-12 110.7 14.4 107 493-608 473-617 (620)
125 PRK06765 homoserine O-acetyltr 98.8 2E-07 4.3E-12 101.0 16.7 61 543-606 321-387 (389)
126 PF05448 AXE1: Acetyl xylan es 98.7 8.9E-08 1.9E-12 100.9 13.2 103 492-606 174-319 (320)
127 TIGR03100 hydr1_PEP hydrolase, 98.7 2.5E-07 5.4E-12 95.4 16.3 121 476-606 84-274 (274)
128 PRK01269 tRNA s(4)U8 sulfurtra 98.7 3.9E-08 8.5E-13 109.3 7.5 77 156-240 405-481 (482)
129 KOG4667 Predicted esterase [Li 98.7 6.1E-07 1.3E-11 86.8 14.4 120 464-596 79-246 (269)
130 TIGR01836 PHA_synth_III_C poly 98.6 3.1E-07 6.7E-12 98.1 14.0 61 543-606 284-349 (350)
131 KOG2984 Predicted hydrolase [G 98.6 3.4E-08 7.3E-13 94.4 4.9 172 373-606 43-275 (277)
132 KOG2382 Predicted alpha/beta h 98.6 1.1E-06 2.4E-11 90.8 16.2 61 542-607 250-313 (315)
133 PRK10162 acetyl esterase; Prov 98.6 2.6E-06 5.7E-11 89.9 19.1 178 372-608 81-316 (318)
134 PLN02872 triacylglycerol lipas 98.6 2E-07 4.3E-12 101.0 10.5 62 542-607 320-389 (395)
135 PRK07868 acyl-CoA synthetase; 98.6 1.1E-06 2.3E-11 106.5 16.9 64 541-607 293-361 (994)
136 KOG3772 M-phase inducer phosph 98.5 1.3E-07 2.8E-12 97.2 6.6 112 128-251 154-278 (325)
137 KOG4391 Predicted alpha/beta h 98.5 6.1E-07 1.3E-11 86.8 10.7 179 370-606 76-281 (300)
138 COG2897 SseA Rhodanese-related 98.5 4.8E-07 1E-11 92.9 8.6 102 130-250 156-276 (285)
139 COG0429 Predicted hydrolase of 98.4 3E-06 6.6E-11 87.5 13.7 65 540-608 269-341 (345)
140 TIGR01838 PHA_synth_I poly(R)- 98.4 6.4E-06 1.4E-10 92.2 15.9 47 541-591 411-457 (532)
141 KOG1838 Alpha/beta hydrolase [ 98.3 1.1E-05 2.4E-10 86.1 15.7 183 370-607 123-388 (409)
142 TIGR03101 hydr2_PEP hydrolase, 98.3 3.2E-06 7E-11 86.8 11.2 110 372-534 25-135 (266)
143 PF06028 DUF915: Alpha/beta hy 98.3 1.2E-05 2.5E-10 82.0 14.6 130 475-604 80-252 (255)
144 PRK04940 hypothetical protein; 98.3 1.6E-05 3.4E-10 76.3 14.2 112 479-605 41-178 (180)
145 COG3545 Predicted esterase of 98.3 4.1E-05 8.9E-10 72.4 16.2 114 483-606 49-178 (181)
146 PF00561 Abhydrolase_1: alpha/ 98.3 4E-06 8.7E-11 82.1 9.6 106 477-592 27-218 (230)
147 PRK10252 entF enterobactin syn 98.2 2E-05 4.4E-10 98.0 16.6 171 372-607 1068-1293(1296)
148 KOG2564 Predicted acetyltransf 98.2 1.2E-05 2.6E-10 80.9 11.4 105 369-528 71-177 (343)
149 PF06500 DUF1100: Alpha/beta h 98.2 1.9E-05 4.1E-10 84.9 13.7 172 370-608 188-410 (411)
150 COG3458 Acetyl esterase (deace 98.2 1.2E-05 2.7E-10 80.5 10.9 118 477-606 160-316 (321)
151 PF06342 DUF1057: Alpha/beta h 98.2 0.0001 2.2E-09 74.9 17.4 142 370-576 33-240 (297)
152 COG0596 MhpC Predicted hydrola 98.1 0.00013 2.8E-09 70.9 17.3 51 542-595 218-268 (282)
153 COG4099 Predicted peptidase [G 98.1 5.7E-06 1.2E-10 83.6 7.5 92 476-576 248-343 (387)
154 TIGR03230 lipo_lipase lipoprot 98.1 3.5E-05 7.6E-10 84.2 13.8 39 493-536 119-157 (442)
155 PF12740 Chlorophyllase2: Chlo 98.1 6.8E-05 1.5E-09 76.1 14.4 162 369-589 14-205 (259)
156 COG3509 LpqC Poly(3-hydroxybut 98.1 1.7E-05 3.6E-10 80.8 9.5 118 371-534 60-180 (312)
157 PF08840 BAAT_C: BAAT / Acyl-C 98.0 1.7E-05 3.7E-10 78.9 8.3 107 475-590 4-163 (213)
158 PF07819 PGAP1: PGAP1-like pro 98.0 5.6E-05 1.2E-09 75.8 11.9 60 472-533 61-123 (225)
159 KOG3043 Predicted hydrolase re 98.0 4.7E-05 1E-09 74.6 10.7 165 372-591 40-211 (242)
160 COG2021 MET2 Homoserine acetyl 98.0 8.9E-05 1.9E-09 77.9 13.5 63 541-606 302-367 (368)
161 cd00707 Pancreat_lipase_like P 98.0 4.1E-05 9E-10 79.1 10.9 38 494-536 113-150 (275)
162 COG4814 Uncharacterized protei 98.0 0.00053 1.2E-08 68.4 17.8 126 481-606 119-286 (288)
163 PF12048 DUF3530: Protein of u 97.9 0.00063 1.4E-08 71.5 19.2 162 370-554 85-255 (310)
164 COG3571 Predicted hydrolase of 97.9 0.00035 7.6E-09 65.0 14.9 85 496-591 92-183 (213)
165 PRK10115 protease 2; Provision 97.9 9.8E-05 2.1E-09 85.8 14.1 112 474-593 505-657 (686)
166 COG3319 Thioesterase domains o 97.9 5.6E-05 1.2E-09 76.9 10.6 101 373-534 1-104 (257)
167 COG3150 Predicted esterase [Ge 97.9 0.00022 4.8E-09 66.8 13.0 116 477-605 42-187 (191)
168 PF09752 DUF2048: Uncharacteri 97.9 0.00032 7E-09 73.7 15.0 55 546-605 290-347 (348)
169 COG0657 Aes Esterase/lipase [L 97.8 0.00059 1.3E-08 71.6 17.0 125 474-605 130-308 (312)
170 COG2945 Predicted hydrolase of 97.8 0.00014 2.9E-09 69.8 10.0 119 473-605 84-205 (210)
171 COG2897 SseA Rhodanese-related 97.8 6.4E-05 1.4E-09 77.4 8.4 111 129-249 10-132 (285)
172 TIGR00976 /NonD putative hydro 97.8 0.00037 8.1E-09 79.1 15.0 40 474-514 79-118 (550)
173 PRK05371 x-prolyl-dipeptidyl a 97.8 0.00035 7.6E-09 82.0 15.0 127 474-608 305-520 (767)
174 TIGR01839 PHA_synth_II poly(R) 97.7 0.00063 1.4E-08 76.0 15.2 45 541-589 437-481 (560)
175 PF07859 Abhydrolase_3: alpha/ 97.7 0.00025 5.3E-09 69.6 10.5 112 473-590 48-209 (211)
176 PRK10439 enterobactin/ferric e 97.7 0.0014 3E-08 71.6 17.0 101 495-604 290-406 (411)
177 TIGR01849 PHB_depoly_PhaZ poly 97.7 0.0014 3.1E-08 70.9 16.4 63 541-606 333-405 (406)
178 PF03403 PAF-AH_p_II: Platelet 97.5 0.00048 1.1E-08 74.4 10.4 54 495-554 230-283 (379)
179 PF10230 DUF2305: Uncharacteri 97.5 0.0064 1.4E-07 62.6 18.0 117 371-532 1-121 (266)
180 PF12715 Abhydrolase_7: Abhydr 97.4 9.8E-05 2.1E-09 78.3 3.4 82 492-584 225-341 (390)
181 PF07224 Chlorophyllase: Chlor 97.4 0.0031 6.6E-08 63.5 13.6 163 368-589 42-230 (307)
182 smart00824 PKS_TE Thioesterase 97.4 0.003 6.6E-08 60.7 13.2 104 495-605 66-209 (212)
183 PF03583 LIP: Secretory lipase 97.3 0.0036 7.9E-08 65.2 14.1 60 544-607 218-281 (290)
184 KOG4627 Kynurenine formamidase 97.3 0.00063 1.4E-08 65.8 7.6 105 494-607 137-267 (270)
185 PF02129 Peptidase_S15: X-Pro 97.3 0.0019 4E-08 66.5 11.4 107 473-589 82-271 (272)
186 PF06057 VirJ: Bacterial virul 97.3 0.0046 1E-07 59.8 12.8 91 492-593 67-177 (192)
187 PF05990 DUF900: Alpha/beta hy 97.1 0.0082 1.8E-07 60.6 13.8 140 370-563 16-168 (233)
188 PF00756 Esterase: Putative es 97.1 0.0023 4.9E-08 64.6 9.3 100 495-602 117-249 (251)
189 COG5105 MIH1 Mitotic inducer, 97.1 0.00083 1.8E-08 68.5 5.9 111 128-252 240-361 (427)
190 PF02273 Acyl_transf_2: Acyl t 97.1 0.0094 2E-07 59.5 13.0 163 369-593 27-241 (294)
191 PF08538 DUF1749: Protein of u 97.1 0.0024 5.2E-08 66.2 9.1 114 371-533 32-148 (303)
192 KOG1515 Arylacetamide deacetyl 97.0 0.038 8.2E-07 58.7 18.2 127 476-607 145-335 (336)
193 TIGR03502 lipase_Pla1_cef extr 97.0 0.0033 7.2E-08 73.2 11.0 36 372-411 449-485 (792)
194 PF10340 DUF2424: Protein of u 97.0 0.021 4.7E-07 61.0 15.9 115 370-536 120-238 (374)
195 COG3243 PhaC Poly(3-hydroxyalk 97.0 0.0026 5.7E-08 68.0 8.5 46 540-589 325-370 (445)
196 COG4188 Predicted dienelactone 96.9 0.0043 9.3E-08 65.6 9.6 174 370-589 69-294 (365)
197 KOG3253 Predicted alpha/beta h 96.8 0.015 3.2E-07 64.5 13.1 88 495-591 252-347 (784)
198 COG1073 Hydrolases of the alph 96.7 0.006 1.3E-07 62.0 8.4 64 542-608 228-298 (299)
199 KOG3724 Negative regulator of 96.7 0.0094 2E-07 67.8 10.3 160 369-567 86-276 (973)
200 KOG2624 Triglyceride lipase-ch 96.4 0.017 3.6E-07 62.7 10.2 63 542-607 329-398 (403)
201 KOG2100 Dipeptidyl aminopeptid 96.4 0.036 7.8E-07 65.2 13.6 125 475-606 590-746 (755)
202 PF03096 Ndr: Ndr family; Int 96.4 0.13 2.8E-06 53.1 15.9 178 370-606 21-278 (283)
203 PLN02633 palmitoyl protein thi 96.3 0.02 4.4E-07 59.4 9.8 34 495-532 96-130 (314)
204 KOG2541 Palmitoyl protein thio 96.3 0.02 4.4E-07 57.8 8.9 51 477-532 77-127 (296)
205 KOG3101 Esterase D [General fu 96.2 0.048 1.1E-06 53.3 10.9 41 369-409 41-81 (283)
206 cd00312 Esterase_lipase Estera 96.2 0.011 2.3E-07 66.1 7.7 57 475-534 155-214 (493)
207 PF02089 Palm_thioest: Palmito 96.1 0.019 4.1E-07 59.0 7.8 52 477-532 61-115 (279)
208 PLN02606 palmitoyl-protein thi 96.1 0.042 9.1E-07 57.0 10.3 34 495-532 97-131 (306)
209 PF04301 DUF452: Protein of un 96.0 0.11 2.3E-06 51.6 12.8 36 494-536 58-93 (213)
210 COG0627 Predicted esterase [Ge 95.9 0.093 2E-06 55.3 12.1 107 494-608 153-312 (316)
211 PF00151 Lipase: Lipase; Inte 95.8 0.026 5.6E-07 60.0 8.0 42 493-537 150-191 (331)
212 PF01674 Lipase_2: Lipase (cla 95.8 0.014 3E-07 58.3 5.3 36 477-512 59-94 (219)
213 PF05057 DUF676: Putative seri 95.7 0.036 7.7E-07 55.2 7.9 26 371-400 3-28 (217)
214 KOG3975 Uncharacterized conser 95.5 0.59 1.3E-05 47.1 15.4 46 545-593 242-287 (301)
215 KOG2931 Differentiation-relate 95.5 1 2.2E-05 46.5 17.4 112 366-532 40-156 (326)
216 PRK14429 acylphosphatase; Prov 95.5 0.031 6.7E-07 47.7 5.8 54 27-80 16-70 (90)
217 PF00708 Acylphosphatase: Acyl 95.5 0.037 7.9E-07 47.3 6.2 52 27-78 18-70 (91)
218 PF08386 Abhydrolase_4: TAP-li 95.4 0.071 1.5E-06 46.6 8.0 60 543-606 32-93 (103)
219 PRK14448 acylphosphatase; Prov 95.4 0.041 8.9E-07 47.0 6.1 53 27-79 16-69 (90)
220 KOG3847 Phospholipase A2 (plat 95.3 0.18 4E-06 52.1 11.5 83 496-589 244-328 (399)
221 PRK14420 acylphosphatase; Prov 95.2 0.043 9.4E-07 46.9 5.8 53 27-79 16-69 (91)
222 PRK14430 acylphosphatase; Prov 95.2 0.046 1E-06 46.9 5.7 53 27-79 18-71 (92)
223 COG1254 AcyP Acylphosphatases 95.2 0.075 1.6E-06 45.5 6.9 52 27-78 18-70 (92)
224 PRK14447 acylphosphatase; Prov 95.1 0.044 9.6E-07 47.3 5.6 54 27-80 18-73 (95)
225 cd00741 Lipase Lipase. Lipase 95.1 0.16 3.4E-06 47.3 9.8 65 494-562 29-97 (153)
226 PRK14449 acylphosphatase; Prov 95.1 0.06 1.3E-06 46.0 6.1 53 27-79 17-70 (90)
227 TIGR01244 conserved hypothetic 95.0 0.078 1.7E-06 48.8 7.1 83 129-228 12-108 (135)
228 PRK14422 acylphosphatase; Prov 95.0 0.062 1.3E-06 46.2 6.0 54 27-80 20-74 (93)
229 PF05677 DUF818: Chlamydia CHL 94.9 0.84 1.8E-05 48.2 15.2 129 476-607 193-363 (365)
230 PRK14436 acylphosphatase; Prov 94.9 0.065 1.4E-06 45.9 6.0 54 27-80 18-72 (91)
231 PRK14435 acylphosphatase; Prov 94.9 0.062 1.3E-06 45.9 5.8 53 27-79 16-69 (90)
232 KOG1529 Mercaptopyruvate sulfu 94.9 0.069 1.5E-06 54.5 6.9 104 131-249 6-130 (286)
233 PRK14433 acylphosphatase; Prov 94.9 0.065 1.4E-06 45.5 5.8 53 27-79 15-68 (87)
234 PRK14450 acylphosphatase; Prov 94.9 0.071 1.5E-06 45.6 6.0 54 27-80 16-71 (91)
235 PRK14426 acylphosphatase; Prov 94.8 0.063 1.4E-06 46.0 5.7 54 27-80 18-73 (92)
236 PF05705 DUF829: Eukaryotic pr 94.8 0.94 2E-05 45.5 15.3 126 476-604 46-240 (240)
237 PRK14445 acylphosphatase; Prov 94.8 0.064 1.4E-06 45.9 5.7 54 27-80 18-72 (91)
238 PRK14451 acylphosphatase; Prov 94.8 0.068 1.5E-06 45.5 5.7 54 27-80 17-71 (89)
239 PRK14428 acylphosphatase; Prov 94.8 0.071 1.5E-06 46.2 5.9 54 27-80 22-76 (97)
240 PRK14440 acylphosphatase; Prov 94.8 0.075 1.6E-06 45.4 6.0 53 27-79 17-70 (90)
241 PRK14427 acylphosphatase; Prov 94.6 0.08 1.7E-06 45.6 5.8 53 27-79 20-73 (94)
242 PRK14432 acylphosphatase; Prov 94.6 0.083 1.8E-06 45.4 5.9 54 27-80 16-71 (93)
243 PRK14421 acylphosphatase; Prov 94.6 0.083 1.8E-06 45.9 5.9 54 27-80 18-72 (99)
244 PRK14438 acylphosphatase; Prov 94.6 0.08 1.7E-06 45.3 5.7 54 27-80 17-71 (91)
245 PRK14425 acylphosphatase; Prov 94.6 0.083 1.8E-06 45.5 5.7 53 27-79 20-73 (94)
246 PRK14423 acylphosphatase; Prov 94.4 0.092 2E-06 45.0 5.7 53 27-79 19-72 (92)
247 PRK14444 acylphosphatase; Prov 94.4 0.098 2.1E-06 44.9 5.9 54 27-80 18-72 (92)
248 PRK14424 acylphosphatase; Prov 94.4 0.11 2.5E-06 44.7 6.2 53 27-79 21-74 (94)
249 PRK14446 acylphosphatase; Prov 94.3 0.067 1.5E-06 45.5 4.6 53 28-80 17-70 (88)
250 KOG2281 Dipeptidyl aminopeptid 94.2 0.62 1.3E-05 52.5 12.8 119 478-606 711-866 (867)
251 PRK14452 acylphosphatase; Prov 94.1 0.13 2.9E-06 45.3 6.1 54 27-80 34-88 (107)
252 PF00135 COesterase: Carboxyle 94.0 0.21 4.4E-06 56.1 9.1 56 475-533 187-245 (535)
253 PRK14437 acylphosphatase; Prov 93.8 0.14 3.1E-06 45.3 5.8 54 27-80 37-91 (109)
254 PRK14442 acylphosphatase; Prov 93.6 0.15 3.3E-06 43.6 5.5 54 27-80 18-72 (91)
255 COG2382 Fes Enterochelin ester 93.6 0.25 5.4E-06 51.1 7.9 99 496-604 180-295 (299)
256 PRK14434 acylphosphatase; Prov 93.5 0.14 3E-06 44.0 5.1 53 28-80 17-73 (92)
257 PRK14441 acylphosphatase; Prov 93.4 0.19 4.1E-06 43.2 5.7 53 27-79 19-72 (93)
258 PRK14431 acylphosphatase; Prov 93.4 0.16 3.5E-06 43.2 5.2 52 28-79 17-69 (89)
259 KOG2237 Predicted serine prote 93.3 0.23 4.9E-06 55.9 7.6 58 471-533 527-584 (712)
260 COG2603 Predicted ATPase [Gene 93.2 0.11 2.3E-06 53.2 4.5 85 157-247 14-127 (334)
261 PF01764 Lipase_3: Lipase (cla 92.3 0.59 1.3E-05 42.4 7.9 38 479-516 49-87 (140)
262 COG4757 Predicted alpha/beta h 92.2 0.99 2.1E-05 45.1 9.5 62 541-605 212-278 (281)
263 COG2819 Predicted hydrolase of 92.2 10 0.00022 38.9 17.1 57 494-555 138-201 (264)
264 PF04273 DUF442: Putative phos 92.2 0.19 4.1E-06 44.6 4.2 85 129-227 12-107 (110)
265 COG2272 PnbA Carboxylesterase 92.1 0.28 6.1E-06 53.9 6.3 57 475-534 159-218 (491)
266 KOG3360 Acylphosphatase [Energ 91.8 0.42 9.1E-06 40.8 5.5 46 27-72 22-68 (98)
267 PLN02727 NAD kinase 91.4 1.4 3E-05 52.1 11.1 171 20-228 174-365 (986)
268 PF11187 DUF2974: Protein of u 91.4 0.43 9.2E-06 47.9 6.3 59 474-533 65-123 (224)
269 PRK14443 acylphosphatase; Prov 91.4 0.43 9.2E-06 41.0 5.3 53 27-79 18-72 (93)
270 PF08237 PE-PPE: PE-PPE domain 91.3 0.65 1.4E-05 46.6 7.4 43 474-516 26-71 (225)
271 KOG1529 Mercaptopyruvate sulfu 91.0 0.38 8.2E-06 49.3 5.5 87 155-248 169-275 (286)
272 PF11288 DUF3089: Protein of u 91.0 0.27 5.9E-06 48.5 4.3 39 475-514 78-116 (207)
273 COG4782 Uncharacterized protei 90.8 2 4.4E-05 45.6 10.7 54 480-533 176-234 (377)
274 PLN02733 phosphatidylcholine-s 90.8 0.45 9.7E-06 52.5 6.2 49 483-532 151-200 (440)
275 PF01083 Cutinase: Cutinase; 90.5 0.33 7.2E-06 46.9 4.4 60 474-534 61-123 (179)
276 PRK14439 acylphosphatase; Prov 90.1 0.62 1.3E-05 43.9 5.5 51 28-78 90-142 (163)
277 PF12146 Hydrolase_4: Putative 88.9 1.7 3.7E-05 36.0 6.9 37 371-411 15-52 (79)
278 cd00519 Lipase_3 Lipase (class 88.4 1.4 3.1E-05 43.8 7.4 33 483-515 117-150 (229)
279 COG3946 VirJ Type IV secretory 87.8 19 0.0004 39.1 15.2 89 494-592 327-433 (456)
280 COG1075 LipA Predicted acetylt 87.6 1.9 4.2E-05 45.9 8.1 55 476-533 109-164 (336)
281 PF11339 DUF3141: Protein of u 87.2 12 0.00027 41.7 13.9 47 540-589 292-348 (581)
282 PLN02847 triacylglycerol lipas 86.8 3.4 7.4E-05 46.8 9.5 41 475-515 224-273 (633)
283 PF02450 LCAT: Lecithin:choles 86.7 0.79 1.7E-05 49.9 4.6 44 490-533 116-160 (389)
284 PRK14890 putative Zn-ribbon RN 86.4 0.53 1.1E-05 36.5 2.2 44 278-322 8-55 (59)
285 COG1770 PtrB Protease II [Amin 86.3 2.2 4.8E-05 48.5 7.8 109 473-589 507-656 (682)
286 COG2888 Predicted Zn-ribbon RN 86.1 0.37 7.9E-06 37.3 1.1 45 277-322 9-57 (61)
287 PLN02408 phospholipase A1 85.0 3.9 8.5E-05 43.9 8.6 36 480-515 184-222 (365)
288 KOG2565 Predicted hydrolases o 84.0 6.9 0.00015 41.8 9.6 89 373-516 153-252 (469)
289 PLN02454 triacylglycerol lipas 83.4 3.1 6.8E-05 45.3 7.2 38 478-515 210-250 (414)
290 cd00127 DSPc Dual specificity 83.4 3.1 6.8E-05 37.5 6.3 25 205-229 80-106 (139)
291 PTZ00472 serine carboxypeptida 83.2 2.9 6.4E-05 46.5 7.2 59 478-536 152-219 (462)
292 KOG1516 Carboxylesterase and r 80.6 2.4 5.2E-05 48.0 5.4 55 476-533 175-232 (545)
293 PLN02571 triacylglycerol lipas 80.4 2.4 5.2E-05 46.2 5.0 38 478-515 208-248 (413)
294 KOG2521 Uncharacterized conser 80.3 45 0.00097 35.7 14.3 60 545-607 225-290 (350)
295 PF10142 PhoPQ_related: PhoPQ- 79.1 13 0.00028 40.2 9.9 126 472-607 147-320 (367)
296 KOG1202 Animal-type fatty acid 78.6 24 0.00052 43.2 12.3 57 475-535 2162-2221(2376)
297 PF11144 DUF2920: Protein of u 77.4 14 0.0003 40.2 9.5 105 465-577 148-322 (403)
298 PF04083 Abhydro_lipase: Parti 77.1 2.1 4.6E-05 34.0 2.5 22 368-389 39-60 (63)
299 PLN02324 triacylglycerol lipas 75.8 4.1 8.8E-05 44.4 5.0 36 479-514 198-236 (415)
300 PLN02310 triacylglycerol lipas 75.7 7.1 0.00015 42.5 6.8 37 479-515 190-231 (405)
301 PLN02802 triacylglycerol lipas 75.3 7.9 0.00017 43.2 7.1 37 479-515 313-352 (509)
302 PLN02934 triacylglycerol lipas 73.9 7.3 0.00016 43.5 6.5 37 478-514 305-342 (515)
303 PLN02719 triacylglycerol lipas 73.7 4.8 0.0001 44.9 5.0 38 478-515 277-320 (518)
304 PLN03037 lipase class 3 family 73.5 15 0.00032 41.2 8.7 21 495-515 320-340 (525)
305 PLN02753 triacylglycerol lipas 71.8 5.6 0.00012 44.5 5.0 39 477-515 290-334 (531)
306 smart00195 DSPc Dual specifici 71.1 11 0.00024 34.0 6.2 25 204-228 76-102 (138)
307 KOG2183 Prolylcarboxypeptidase 71.1 11 0.00024 40.9 6.8 107 374-515 82-189 (492)
308 PLN02162 triacylglycerol lipas 70.9 6.6 0.00014 43.4 5.2 36 479-514 263-299 (475)
309 PLN00413 triacylglycerol lipas 70.4 7 0.00015 43.3 5.3 35 479-513 269-304 (479)
310 PF00450 Peptidase_S10: Serine 67.6 27 0.00058 37.7 9.3 61 476-536 115-184 (415)
311 PF11494 Ta0938: Ta0938; Inte 67.5 2 4.4E-05 36.6 0.4 32 278-312 15-46 (105)
312 PLN02761 lipase class 3 family 66.4 8.2 0.00018 43.2 4.9 37 479-515 273-316 (527)
313 COG1505 Serine proteases of th 66.2 7.4 0.00016 44.0 4.5 125 476-608 480-647 (648)
314 PF13350 Y_phosphatase3: Tyros 65.9 21 0.00046 33.6 7.1 27 206-233 124-151 (164)
315 PRK04023 DNA polymerase II lar 63.5 5.1 0.00011 47.7 2.7 45 279-327 628-675 (1121)
316 COG3453 Uncharacterized protei 62.4 13 0.00028 33.4 4.4 22 205-226 86-107 (130)
317 PF05277 DUF726: Protein of un 61.3 26 0.00056 37.5 7.4 80 480-562 204-289 (345)
318 KOG1717 Dual specificity phosp 58.3 13 0.00028 37.9 4.2 40 474-513 234-275 (343)
319 PF06544 DUF1115: Protein of u 55.8 45 0.00097 30.2 7.0 56 15-72 2-59 (128)
320 KOG1551 Uncharacterized conser 54.9 54 0.0012 33.7 7.8 47 558-606 316-365 (371)
321 COG0068 HypF Hydrogenase matur 53.8 20 0.00043 41.4 5.2 74 27-108 13-87 (750)
322 KOG1553 Predicted alpha/beta h 53.5 6.1 0.00013 41.7 1.1 80 477-565 295-400 (517)
323 KOG4569 Predicted lipase [Lipi 53.1 18 0.00039 38.6 4.6 32 484-515 161-193 (336)
324 PF09994 DUF2235: Uncharacteri 53.0 49 0.0011 34.2 7.7 38 476-514 76-113 (277)
325 PF03833 PolC_DP2: DNA polymer 50.2 5.3 0.00011 46.8 0.0 47 278-328 656-705 (900)
326 COG2453 CDC14 Predicted protei 49.8 16 0.00035 35.1 3.3 25 204-228 103-129 (180)
327 TIGR02689 ars_reduc_gluta arse 49.7 21 0.00046 32.1 3.9 36 207-244 1-37 (126)
328 PRK11391 etp phosphotyrosine-p 48.4 16 0.00034 33.9 2.9 23 207-229 3-26 (144)
329 PLN02517 phosphatidylcholine-s 48.4 25 0.00054 40.2 4.8 42 492-533 212-263 (642)
330 PLN03016 sinapoylglucose-malat 48.1 59 0.0013 36.0 7.8 58 478-535 146-212 (433)
331 COG0394 Wzb Protein-tyrosine-p 48.0 24 0.00052 32.6 4.0 37 207-245 3-40 (139)
332 COG4947 Uncharacterized protei 46.5 76 0.0017 30.6 7.0 71 496-576 104-199 (227)
333 PRK15375 pathogenicity island 45.2 23 0.0005 39.6 3.9 42 40-81 15-56 (535)
334 KOG3636 Uncharacterized conser 44.4 51 0.0011 36.1 6.1 88 157-252 325-432 (669)
335 PRK10126 tyrosine phosphatase; 44.3 19 0.00042 33.3 2.8 23 207-229 3-26 (147)
336 PRK13530 arsenate reductase; P 44.2 30 0.00065 31.5 4.0 36 206-243 3-39 (133)
337 PRK12361 hypothetical protein; 43.5 42 0.00091 38.2 5.9 26 204-229 173-200 (547)
338 PF06259 Abhydrolase_8: Alpha/ 43.3 2.1E+02 0.0044 27.6 9.7 36 493-533 109-144 (177)
339 PRK14714 DNA polymerase II lar 42.1 17 0.00036 44.8 2.4 45 278-326 668-720 (1337)
340 PF12156 ATPase-cat_bd: Putati 41.1 14 0.00029 31.4 1.1 10 279-288 2-11 (88)
341 PRK07688 thiamine/molybdopteri 39.5 41 0.00088 36.0 4.7 41 129-177 276-316 (339)
342 PF06309 Torsin: Torsin; Inte 39.3 32 0.00069 31.4 3.2 24 369-392 49-72 (127)
343 smart00226 LMWPc Low molecular 38.3 25 0.00053 32.0 2.5 36 209-246 1-37 (140)
344 KOG4372 Predicted alpha/beta h 37.9 69 0.0015 34.8 6.0 32 370-401 78-110 (405)
345 PF09992 DUF2233: Predicted pe 37.7 37 0.00081 32.0 3.7 40 204-245 98-142 (170)
346 PF05577 Peptidase_S28: Serine 36.9 1.8E+02 0.004 31.8 9.6 56 474-534 93-149 (434)
347 cd00115 LMWPc Substituted upda 36.2 37 0.00081 31.0 3.3 38 207-245 1-39 (141)
348 KOG4388 Hormone-sensitive lipa 36.2 92 0.002 35.5 6.7 39 490-529 466-504 (880)
349 PF01451 LMWPc: Low molecular 34.6 18 0.0004 32.8 1.0 38 209-246 1-41 (138)
350 PLN02213 sinapoylglucose-malat 34.1 1.2E+02 0.0026 31.9 7.2 59 478-536 32-99 (319)
351 PF15645 Tox-PLDMTX: Dermonecr 33.0 26 0.00057 32.2 1.7 45 219-267 11-63 (135)
352 KOG2369 Lecithin:cholesterol a 30.4 58 0.0013 36.1 4.0 39 477-515 161-204 (473)
353 PLN02209 serine carboxypeptida 29.8 1E+02 0.0022 34.2 6.0 59 477-535 147-214 (437)
354 PRK00420 hypothetical protein; 29.1 38 0.00083 30.1 2.0 24 278-301 24-48 (112)
355 PF07082 DUF1350: Protein of u 28.9 3.2E+02 0.0069 27.9 8.7 18 497-514 94-111 (250)
356 PHA00626 hypothetical protein 28.6 41 0.0009 26.0 1.8 28 295-322 2-30 (59)
357 PRK12336 translation initiatio 28.6 27 0.00059 34.4 1.1 53 254-311 69-127 (201)
358 cd07227 Pat_Fungal_NTE1 Fungal 28.3 68 0.0015 33.1 4.0 30 484-513 29-58 (269)
359 COG2936 Predicted acyl esteras 28.2 76 0.0016 36.2 4.6 65 462-533 95-159 (563)
360 TIGR00853 pts-lac PTS system, 28.1 69 0.0015 27.4 3.4 43 205-248 2-46 (95)
361 PRK03988 translation initiatio 27.7 31 0.00068 31.9 1.3 56 251-311 70-131 (138)
362 PLN02213 sinapoylglucose-malat 27.6 1.4E+02 0.003 31.5 6.3 57 546-605 234-315 (319)
363 PF00450 Peptidase_S10: Serine 27.2 52 0.0011 35.4 3.1 56 546-604 331-413 (415)
364 PF02069 Metallothio_Pro: Prok 25.3 48 0.001 25.3 1.6 34 293-326 7-40 (52)
365 PRK12467 peptide synthase; Pro 24.7 2.6E+02 0.0056 40.1 9.7 101 373-534 3693-3796(3956)
366 PF00782 DSPc: Dual specificit 24.7 75 0.0016 28.2 3.2 26 204-229 71-98 (133)
367 cd07225 Pat_PNPLA6_PNPLA7 Pata 24.6 86 0.0019 32.9 4.1 30 484-513 34-63 (306)
368 TIGR00311 aIF-2beta translatio 24.5 38 0.00082 31.1 1.2 52 255-311 69-126 (133)
369 COG5153 CVT17 Putative lipase 24.3 89 0.0019 32.5 3.8 38 477-514 259-297 (425)
370 KOG4540 Putative lipase essent 24.3 89 0.0019 32.5 3.8 38 477-514 259-297 (425)
371 KOG1093 Predicted protein kina 24.3 18 0.00039 40.7 -1.1 82 158-246 634-718 (725)
372 cd07207 Pat_ExoU_VipD_like Exo 24.1 92 0.002 29.7 3.9 23 491-513 25-47 (194)
373 KOG2385 Uncharacterized conser 23.8 1.5E+02 0.0032 33.4 5.6 57 482-538 433-492 (633)
374 smart00653 eIF2B_5 domain pres 23.5 49 0.0011 29.3 1.7 56 251-311 47-109 (110)
375 PRK00142 putative rhodanese-re 23.2 22 0.00047 37.6 -0.8 59 133-212 17-75 (314)
376 cd07198 Patatin Patatin-like p 23.2 1.1E+02 0.0023 28.9 4.1 30 484-513 17-46 (172)
377 PF10497 zf-4CXXC_R1: Zinc-fin 23.0 64 0.0014 28.3 2.3 32 278-309 8-44 (105)
378 KOG2879 Predicted E3 ubiquitin 22.8 47 0.001 34.1 1.6 46 277-328 239-289 (298)
379 TIGR02691 arsC_pI258_fam arsen 22.6 86 0.0019 28.4 3.1 34 209-244 1-35 (129)
380 PRK07116 flavodoxin; Provision 22.6 1.7E+02 0.0036 27.3 5.3 47 204-250 104-158 (160)
381 KOG2041 WD40 repeat protein [G 22.3 52 0.0011 38.1 1.9 47 277-325 1117-1166(1189)
382 PTZ00393 protein tyrosine phos 22.2 84 0.0018 31.9 3.2 28 204-233 168-197 (241)
383 cd07228 Pat_NTE_like_bacteria 21.8 1.3E+02 0.0028 28.5 4.3 23 491-513 26-48 (175)
384 KOG1282 Serine carboxypeptidas 21.8 1.8E+02 0.004 32.3 6.0 57 546-605 364-446 (454)
385 PF06200 tify: tify domain; I 21.6 48 0.001 23.3 1.0 11 255-265 11-21 (36)
386 PF14446 Prok-RING_1: Prokaryo 21.3 51 0.0011 25.4 1.1 12 303-314 21-32 (54)
387 cd07209 Pat_hypo_Ecoli_Z1214_l 21.3 1.1E+02 0.0025 30.0 4.0 29 486-514 19-47 (215)
388 PF12146 Hydrolase_4: Putative 21.0 2E+02 0.0044 23.5 4.8 54 545-604 16-78 (79)
389 PF05706 CDKN3: Cyclin-depende 20.8 84 0.0018 30.1 2.7 26 204-229 131-158 (168)
390 PRK12865 YciI-like protein; Re 20.8 2E+02 0.0043 24.6 4.9 53 25-77 17-76 (97)
391 PRK09590 celB cellobiose phosp 20.6 1E+02 0.0022 27.0 3.1 39 207-246 2-42 (104)
392 PTZ00242 protein tyrosine phos 20.6 96 0.0021 29.4 3.1 26 204-229 96-123 (166)
393 KOG3967 Uncharacterized conser 20.5 6.3E+02 0.014 25.4 8.7 37 479-515 174-212 (297)
394 PF03283 PAE: Pectinacetyleste 20.5 2.1E+02 0.0045 30.9 6.0 57 477-535 140-198 (361)
395 PRK14559 putative protein seri 20.4 61 0.0013 37.8 2.0 46 279-326 3-52 (645)
396 PF02318 FYVE_2: FYVE-type zin 20.1 61 0.0013 28.9 1.6 47 277-325 54-104 (118)
397 PRK10279 hypothetical protein; 20.0 1.3E+02 0.0027 31.7 4.1 29 484-512 24-52 (300)
No 1
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=100.00 E-value=1.2e-78 Score=602.41 Aligned_cols=278 Identities=35% Similarity=0.681 Sum_probs=256.1
Q ss_pred CceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCC
Q 007311 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDY 88 (608)
Q Consensus 9 ~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~ 88 (608)
++|.|++||+|++|+||++++++|+++|+++||+||||||.|||||||||+.+++++|++||+++|+|+++.||+|.++
T Consensus 3 ~~~~vla~Y~f~~i~dp~~~~~~l~~~~~~~~vkGrillA~EGINgtvsG~~e~~~~~~~~l~a~~~f~~l~~K~s~~~- 81 (308)
T COG1054 3 EPYTVLAYYKFVPIEDPEALRDPLLALCKALGVKGRILLAHEGINGTVSGSAEAIEAYMAWLRADPGFADLRFKISEAD- 81 (308)
T ss_pred cceEEEEEEEEEecCCHHHHHHHHHHHHHHcCceeEEEEccCCcceeEecCHHHHHHHHHHHHhCcccccceeeecccc-
Confidence 4699999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh
Q 007311 89 PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY 168 (608)
Q Consensus 89 ~~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~ 168 (608)
+++|++|+||+|+|||+||..+.+++ ....|.||+|+||+++|.+ +++++||+||.|
T Consensus 82 --------~~pF~r~kVk~kkEIV~lg~~ddv~p--~~~vG~yl~p~~wn~~l~D-------------~~~vviDtRN~Y 138 (308)
T COG1054 82 --------EKPFWRLKVKLKKEIVALGVEDDVDP--LENVGTYLSPKDWNELLSD-------------PDVVVIDTRNDY 138 (308)
T ss_pred --------CCCcceEEEeehhhheecCCCCCcCc--cccccCccCHHHHHHHhcC-------------CCeEEEEcCcce
Confidence 46999999999999999998764553 5667999999999999976 689999999999
Q ss_pred hhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 169 ETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 169 E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||++|||.| |++|++++|++||.|+.++.+..++|+|+||||||||||||++||++. ||++||||+|||..|++
T Consensus 139 E~~iG~F~g----Av~p~~~tFrefP~~v~~~~~~~~~KkVvmyCTGGIRCEKas~~m~~~--GF~eVyhL~GGIl~Y~e 212 (308)
T COG1054 139 EVAIGHFEG----AVEPDIETFREFPAWVEENLDLLKDKKVVMYCTGGIRCEKASAWMKEN--GFKEVYHLEGGILKYLE 212 (308)
T ss_pred eEeeeeecC----ccCCChhhhhhhHHHHHHHHHhccCCcEEEEcCCceeehhhHHHHHHh--cchhhhcccchHHHHhh
Confidence 999999999 899999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred hCCCC-CeeceeeeeeeeccccCCCCCCc-cccccCCCCccccccCCCCCccccceEEeCccccccccccccchhhhcCC
Q 007311 249 QFPDG-GFFKGKNFVFDHRISVGSSDADI-MGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRMEGAQYVCELCRKHGK 326 (608)
Q Consensus 249 ~~~~~-~~~~G~~fVFD~R~~~~~~~~~~-~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~~~~~~c~~c~~~~~ 326 (608)
+++.. .+|+|+|||||+|+||+++.... +..|. ||+|+.|+.++++|+.|..+...+|.+.|+++.+
T Consensus 213 ~~~~~g~lw~G~cFVFDeRvav~~~l~~~~~~~C~-----------~C~~p~~~~~~~~~~~~~~~~~~~C~~ec~~~~~ 281 (308)
T COG1054 213 DVGTEGSLWDGKCFVFDERVAVPIGLVEGDHTPCD-----------NCRNPLCNLLFISCEYCEGKYCGCCSDECSEEPR 281 (308)
T ss_pred hcCccCceeccceeEecceecccCcccCCCcchhh-----------hcCCCCCHHHhhcchhhhcccCCCccHHHhhhhh
Confidence 99874 58999999999999999864433 43343 7999999999999999998777766688998876
Q ss_pred C
Q 007311 327 S 327 (608)
Q Consensus 327 ~ 327 (608)
.
T Consensus 282 ~ 282 (308)
T COG1054 282 L 282 (308)
T ss_pred h
Confidence 3
No 2
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=100.00 E-value=1.1e-65 Score=534.60 Aligned_cols=287 Identities=36% Similarity=0.704 Sum_probs=261.7
Q ss_pred ceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 007311 10 QYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYP 89 (608)
Q Consensus 10 ~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~ 89 (608)
+|.|++||||++|+||+++++++++.|+.++++|||++|.|||||||+|+.+++.+|+.||..+|+|+++++|++.++
T Consensus 3 ~~~v~~~Y~f~~i~~~~~~~~~l~~~~~~~d~rg~i~~a~egIngtis~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~-- 80 (314)
T PRK00142 3 PYRVLLYYKYTPIEDPEAFRDEHLALCKSLGLKGRILVAEEGINGTVSGTIEQTEAYMAWLKADPRFADIRFKISEDD-- 80 (314)
T ss_pred ccEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEcCCCceEEEEecHHHHHHHHHHHhhCcCCCCceEEecccc--
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhh
Q 007311 90 LNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE 169 (608)
Q Consensus 90 ~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E 169 (608)
.++|++|++|+++|||++|.++.+. +....+.+|+|+||++++++ ++++||||||.+|
T Consensus 81 -------~~~f~~l~~~~~~eLv~~G~d~~v~--~~~~~~~~is~~el~~~l~~-------------~~~vlIDVR~~~E 138 (314)
T PRK00142 81 -------GHAFPRLSVKVRKEIVALGLDDDID--PLENVGTYLKPKEVNELLDD-------------PDVVFIDMRNDYE 138 (314)
T ss_pred -------CCCcccceeeeeeeeeecCCCCCCC--ccccCCcccCHHHHHHHhcC-------------CCeEEEECCCHHH
Confidence 3589999999999999999864443 35577999999999999975 5799999999999
Q ss_pred hhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 170 TRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 170 ~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|++|||+| +++++...|.+++.++.+.+...++++|||||++|+||++|+.+|+++ ||+|||+|+|||.+|.++
T Consensus 139 ~~~GhI~G----Ai~ip~~~~~~~~~~l~~~~~~~kdk~IvvyC~~G~Rs~~aa~~L~~~--Gf~~V~~L~GGi~~w~~~ 212 (314)
T PRK00142 139 YEIGHFEN----AIEPDIETFREFPPWVEENLDPLKDKKVVMYCTGGIRCEKASAWMKHE--GFKEVYQLEGGIITYGED 212 (314)
T ss_pred HhcCcCCC----CEeCCHHHhhhhHHHHHHhcCCCCcCeEEEECCCCcHHHHHHHHHHHc--CCCcEEEecchHHHHHHh
Confidence 99999999 788888888888888866566679999999999999999999999997 999999999999999999
Q ss_pred CCCCC-eeceeeeeeeeccccCCCCCCccccccCCCCccccccCCCCCccccceEEeCccccccccccccchhhhcCCC
Q 007311 250 FPDGG-FFKGKNFVFDHRISVGSSDADIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRMEGAQYVCELCRKHGKS 327 (608)
Q Consensus 250 ~~~~~-~~~G~~fVFD~R~~~~~~~~~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~~~~~~c~~c~~~~~~ 327 (608)
+++++ +|+|+|||||+|++++.+..+++++|+.||+|+|+|. ||+|+.||+++++|+.|..+...+||..|..+.+.
T Consensus 213 ~~~~~~~w~G~~fVFD~R~~~~~~~~~~~~~c~~cg~~~~~~~-~C~~~~C~~~~~~c~~c~~~~~~~~s~~~~~~~~~ 290 (314)
T PRK00142 213 PETQGLLWDGKLYVFDERMAVPINDEVPIGHCHQCGTPCDRYV-NCANPACNLLILQCEECEEKYLGCCSEECCEHPRN 290 (314)
T ss_pred hccccceeecCCccccCcccCCCCccccccccccCCCCcchhh-CCCCCCCCCeEeechhhhHHhcCccCchhcccccC
Confidence 98764 9999999999999998876788999999999999998 89999999999999999988888888778776643
No 3
>PRK01415 hypothetical protein; Validated
Probab=100.00 E-value=2.6e-64 Score=502.61 Aligned_cols=234 Identities=28% Similarity=0.555 Sum_probs=216.4
Q ss_pred CceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCC
Q 007311 9 EQYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDY 88 (608)
Q Consensus 9 ~~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~ 88 (608)
++|.|++||+|++|+||++++++|+++|+.++|+||||||+|||||||||+.+++++|+++|+++++|+++++|+|.++
T Consensus 3 ~~~~v~~fY~f~~i~~~~~~~~~l~~~~~~~~~~G~i~la~EGIN~tisg~~~~~~~~~~~l~~~~~~~~~~~k~s~~~- 81 (247)
T PRK01415 3 EKIAILSAYSFVNIEEPANLIPKLLLIGKRKYVRGTILLANEGFNGSFSGSYENVNLVLEELIKLTGPKDVNVKINYSD- 81 (247)
T ss_pred CCcEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEccCccceEeeCCHHHHHHHHHHHHhCcCCCCceeeccccc-
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh
Q 007311 89 PLNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY 168 (608)
Q Consensus 89 ~~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~ 168 (608)
.++|++|+||+|+|||+||.. .+++ ....|++|+|++|++++++ ++++||||||++
T Consensus 82 --------~~~F~~l~vr~k~eiV~~g~~-~~~~--~~~~g~~i~p~e~~~ll~~-------------~~~vvIDVRn~~ 137 (247)
T PRK01415 82 --------VHPFQKLKVRLKKEIVAMNVD-DLNV--DLFKGEYIEPKDWDEFITK-------------QDVIVIDTRNDY 137 (247)
T ss_pred --------CCCCCccEEEeeceEEecCCC-CCCc--cccCccccCHHHHHHHHhC-------------CCcEEEECCCHH
Confidence 469999999999999999984 3443 3457999999999999976 589999999999
Q ss_pred hhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 169 ETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 169 E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||++|||+| ++++++..|+++|.|++...+.+++++|+|||++|+||++|+++|+++ ||+|||+|+|||.+|++
T Consensus 138 E~~~Ghi~g----Ainip~~~f~e~~~~~~~~~~~~k~k~Iv~yCtgGiRs~kAa~~L~~~--Gf~~Vy~L~GGi~~w~~ 211 (247)
T PRK01415 138 EVEVGTFKS----AINPNTKTFKQFPAWVQQNQELLKGKKIAMVCTGGIRCEKSTSLLKSI--GYDEVYHLKGGILQYLE 211 (247)
T ss_pred HHhcCCcCC----CCCCChHHHhhhHHHHhhhhhhcCCCeEEEECCCChHHHHHHHHHHHc--CCCcEEEechHHHHHHH
Confidence 999999999 888888889999998876666789999999999999999999999997 99999999999999999
Q ss_pred hCCC-CCeeceeeeeeeeccccCCCC
Q 007311 249 QFPD-GGFFKGKNFVFDHRISVGSSD 273 (608)
Q Consensus 249 ~~~~-~~~~~G~~fVFD~R~~~~~~~ 273 (608)
++++ +++|+|+|||||+|+||++..
T Consensus 212 ~~~~~~~~w~G~~fVFD~R~av~~~l 237 (247)
T PRK01415 212 DTQNKNNLWQGECFVFDDRRAVTDDL 237 (247)
T ss_pred hcccCCCeeeeeeeeeCceeecCCCC
Confidence 9886 479999999999999998753
No 4
>PRK05320 rhodanese superfamily protein; Provisional
Probab=100.00 E-value=4e-61 Score=486.96 Aligned_cols=253 Identities=27% Similarity=0.534 Sum_probs=225.1
Q ss_pred ceEEEEeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCC
Q 007311 10 QYGVLLYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYP 89 (608)
Q Consensus 10 ~~~v~~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~ 89 (608)
.|.|++||||++|+||++++++|+++|+.++|+||||||+|||||||||+.+.+++|+.+|++++.|+++.+|++.+..
T Consensus 2 ~~~~~~~Y~f~~i~~~~~~~~~~~~~~~~~~~~G~i~ia~eGiN~t~~g~~~~id~~~~~l~~~~~~~dl~~k~~~~~~- 80 (257)
T PRK05320 2 QIVNIAAYKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFLAGTREAIDAFYAWLRADARFADLQVKESLSDS- 80 (257)
T ss_pred ceEEEEEEceeecCCHHHHHHHHHHHHHHCCCeEEEEEcCCCceEEEEeeHHHHHHHHHHHhhCCCccCceeecccccC-
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCccccCCccccceeeecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhh
Q 007311 90 LNGKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYE 169 (608)
Q Consensus 90 ~~~~~~~~~~F~~l~vr~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E 169 (608)
+||.+|+||+|+|||++|.. .++ .....+.+|+|+||++++++. .++.+++++||||||.+|
T Consensus 81 --------~pF~~l~vk~k~eiv~~g~~-~~n--~~~~~~~~is~~el~~~l~~~-------~~~~~~~~vlIDVR~~~E 142 (257)
T PRK05320 81 --------QPFRRMLVKLKREIITMKRP-AIR--PELGRAPSVDAATLKRWLDQG-------HDDAGRPVVMLDTRNAFE 142 (257)
T ss_pred --------CCchhccchhhhHHhhcCCc-ccC--cccCcCceeCHHHHHHHHhcc-------ccccCCCeEEEECCCHHH
Confidence 49999999999999999963 232 244568999999999999762 011124689999999999
Q ss_pred hhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 170 TRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 170 ~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|++|||+| +++++...|++++.|+.+.....++|+|+|||++|+||++|+.+|+++ ||+|||+|+|||.+|.++
T Consensus 143 ~~~Ghi~G----AiniPl~~f~~~~~~l~~~~~~~kdk~IvvyC~~G~Rs~~Aa~~L~~~--Gf~~V~~L~GGi~~w~~~ 216 (257)
T PRK05320 143 VDVGTFDG----ALDYRIDKFTEFPEALAAHRADLAGKTVVSFCTGGIRCEKAAIHMQEV--GIDNVYQLEGGILKYFEE 216 (257)
T ss_pred HccCccCC----CEeCChhHhhhhHHHHHhhhhhcCCCeEEEECCCCHHHHHHHHHHHHc--CCcceEEeccCHHHHHHh
Confidence 99999999 788888888899998876554458999999999999999999999997 999999999999999999
Q ss_pred CCCCCeeceeeeeeeeccccCCC-CCCccccccCCCCccc
Q 007311 250 FPDGGFFKGKNFVFDHRISVGSS-DADIMGSCLLCSSSFD 288 (608)
Q Consensus 250 ~~~~~~~~G~~fVFD~R~~~~~~-~~~~~~~C~~C~~~~~ 288 (608)
+++ .+|+|+|||||+|+||++. .+.+++.|+.|+.|..
T Consensus 217 ~~~-~~~~G~~fVFD~R~~~~~~~~~~~~~~c~~c~~~~~ 255 (257)
T PRK05320 217 VGG-AHYDGDCFVFDYRTALDPQLAPLVDVTCFACRAVVT 255 (257)
T ss_pred CCC-CeeeeeeeeecCeeecCCCCccCccceecCCCCcCC
Confidence 865 5799999999999999986 4566889999999975
No 5
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-33 Score=269.10 Aligned_cols=212 Identities=41% Similarity=0.747 Sum_probs=169.2
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++++|||||||.||++.|+.+|++|++.|.+.++++|++||++++....+....+...+- |+ +.....++||....
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a--~~-~~~~~~~~Wf~~n~ 79 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDA--PP-DVEQNRYGWFSNNE 79 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccC--Cc-ccccchhhhhcccc
Confidence 4578999999999999999999999999999889999999999988655433211111110 11 00111567776321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhh---hhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWER---LKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~---~~~~~~l~~v 526 (608)
. ......++++++++|.+.|.+.||+|||+||||||+||..++...+. ....++++++
T Consensus 80 -------------~------~~~~~~~~eesl~yl~~~i~enGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~ 140 (230)
T KOG2551|consen 80 -------------A------SFTEYFGFEESLEYLEDYIKENGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFA 140 (230)
T ss_pred -------------c------ccccccChHHHHHHHHHHHHHhCCCccccccchhHHHHHHhhcccccCCcccCCCCeEEE
Confidence 0 12346789999999999999999999999999999999999983332 1235789999
Q ss_pred EEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHH
Q 007311 527 ILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 527 IlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~ 602 (608)
|++||+.+.... .....+++|+|||.|+ .|.+||.+.++.|++.|++ ..++.|+|||+||+..++++.|.+
T Consensus 141 v~~SGf~~~~~~~~~~~~~~~i~~PSLHi~G~---~D~iv~~~~s~~L~~~~~~--a~vl~HpggH~VP~~~~~~~~i~~ 215 (230)
T KOG2551|consen 141 VFISGFKFPSKKLDESAYKRPLSTPSLHIFGE---TDTIVPSERSEQLAESFKD--ATVLEHPGGHIVPNKAKYKEKIAD 215 (230)
T ss_pred EEEecCCCCcchhhhhhhccCCCCCeeEEecc---cceeecchHHHHHHHhcCC--CeEEecCCCccCCCchHHHHHHHH
Confidence 999999987322 2356899999999999 8999999999999999998 599999999999999999999999
Q ss_pred HHHHhC
Q 007311 603 FLQRFL 608 (608)
Q Consensus 603 Fl~~~L 608 (608)
||..++
T Consensus 216 fi~~~~ 221 (230)
T KOG2551|consen 216 FIQSFL 221 (230)
T ss_pred HHHHHH
Confidence 998753
No 6
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.97 E-value=1.2e-31 Score=266.06 Aligned_cols=202 Identities=39% Similarity=0.687 Sum_probs=125.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+|++||||||+|||++.|+.|++.|++.|.+ .++|+|+|||++++ ++.++...............+.++|+....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~----~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 78 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVP----PGPGIEPFSSEAESAFGDPGPFYSWWDPDD 78 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE-------GGG-SS---HHHHHHHHTT--EESS---S
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccC----CcccccccccccccccCCCCcceeeeecCC
Confidence 5789999999999999999999999999998 99999999999883 111111000000000123456899988332
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhh---CCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLK---GEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~---~~~~l~~v 526 (608)
. .....++++++++|.+.+.+++|++||+||||||+||+.++.++++.. ...+++++
T Consensus 79 ~--------------------~~~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~ 138 (212)
T PF03959_consen 79 D--------------------DHEYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFA 138 (212)
T ss_dssp ---------------------SGGG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEE
T ss_pred C--------------------cccccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEE
Confidence 0 134578999999999999999999999999999999999998776533 35789999
Q ss_pred EEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHH
Q 007311 527 ILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEI 600 (608)
Q Consensus 527 IlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i 600 (608)
|++||+.|..... ...+|++|+|||+|+ +|.+++.+.+++|++.|.+. ..+++|++||.+|...++++++
T Consensus 139 V~~sg~~p~~~~~~~~~~~~~i~iPtlHv~G~---~D~~~~~~~s~~L~~~~~~~-~~v~~h~gGH~vP~~~~~~~~~ 212 (212)
T PF03959_consen 139 VFISGFPPPDPDYQELYDEPKISIPTLHVIGE---NDPVVPPERSEALAEMFDPD-ARVIEHDGGHHVPRKKEDVDKY 212 (212)
T ss_dssp EEES----EEE-GTTTT--TT---EEEEEEET---T-SSS-HHHHHHHHHHHHHH-EEEEEESSSSS----HHHHHH-
T ss_pred EEEcccCCCchhhhhhhccccCCCCeEEEEeC---CCCCcchHHHHHHHHhccCC-cEEEEECCCCcCcCChhhccCC
Confidence 9999999875531 356789999999999 89999999999999999987 8999999999999988777653
No 7
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.88 E-value=9.6e-22 Score=195.44 Aligned_cols=193 Identities=24% Similarity=0.317 Sum_probs=126.7
Q ss_pred CCCCccEEEEecCCCCChHHHHHHHHHHHH-H-ccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeee
Q 007311 368 VCRRKLRILCLHGFRQNASSFKGRTASLAK-K-LKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWF 445 (608)
Q Consensus 368 ~~~~~~~iLlLHG~G~na~~f~~~~~~L~~-~-L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 445 (608)
...++++||+|||+|+|++.|. .+.. . ..+.+.+|+++||........ .....+||
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~----~~~~~~~~~~~~~~i~p~ap~~~~~~~~------------------g~~~~~Wf 67 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFA----LLAELNLALPNTRFISPRAPSRPVTVPG------------------GYRMPAWF 67 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHH----HHHHHHTCSTTEEEEEE---EEE-GGGT------------------T-EEE-SS
T ss_pred CCCCceEEEEECCCCCCcchhH----HHHhhcccCCceEEEeccCCCCCccccc------------------ccCCCcee
Confidence 3466789999999999997776 3333 1 235799999999974432110 01134999
Q ss_pred ccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh------CCceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 446 VAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE------GPFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~------~~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
+.... ++.. ....+++.++.++|.++|+.. .....|+||||||+||+.++++ .
T Consensus 68 ~~~~~---------------~~~~-~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~-----~ 126 (216)
T PF02230_consen 68 DIYDF---------------DPEG-PEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALR-----Y 126 (216)
T ss_dssp -BSCS---------------SSSS-EB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHC-----T
T ss_pred eccCC---------------Ccch-hhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHH-----c
Confidence 84321 1111 234678888888888888753 1345799999999999999994 4
Q ss_pred CCCccEEEEecCCCCCccccc---cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCC
Q 007311 520 EIDFRFAILCSGFALHSAEFE---HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTR 593 (608)
Q Consensus 520 ~~~l~~vIlisG~~~~~~~~~---~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~ 593 (608)
+.+++++|++||+.+...... ....++|++++||. +|++||.+.++++.+.+... ..++..++ +||.++.
T Consensus 127 p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~---~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~- 202 (216)
T PF02230_consen 127 PEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD---EDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP- 202 (216)
T ss_dssp SSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET---T-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H-
T ss_pred CcCcCEEEEeeccccccccccccccccCCCcEEEEecC---CCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH-
Confidence 678999999999998754321 22337999999999 89999999999999999864 35677777 7999954
Q ss_pred hhhHHHHHHHHHHhC
Q 007311 594 SPYIDEIKSFLQRFL 608 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~L 608 (608)
+++.++.+||++.+
T Consensus 203 -~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 203 -EELRDLREFLEKHI 216 (216)
T ss_dssp -HHHHHHHHHHHHH-
T ss_pred -HHHHHHHHHHhhhC
Confidence 89999999998764
No 8
>COG0400 Predicted esterase [General function prediction only]
Probab=99.87 E-value=1.9e-21 Score=190.71 Aligned_cols=186 Identities=23% Similarity=0.259 Sum_probs=142.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+..++||+|||+|+|..+|. ++.+.+.+++.++++++|.... + ....++|++
T Consensus 16 p~~~~iilLHG~Ggde~~~~----~~~~~~~P~~~~is~rG~v~~~----g-----------------~~~~f~~~~--- 67 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLV----PLPELILPNATLVSPRGPVAEN----G-----------------GPRFFRRYD--- 67 (207)
T ss_pred CCCcEEEEEecCCCChhhhh----hhhhhcCCCCeEEcCCCCcccc----C-----------------cccceeecC---
Confidence 44568999999999999999 6777777889999999996633 1 124677776
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+.||..+. ........+.|.....+.+ ....++||||||+||+.++++. +..++++
T Consensus 68 ------------~~~~d~edl---~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~-----~~~~~~a 127 (207)
T COG0400 68 ------------EGSFDQEDL---DLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTL-----PGLFAGA 127 (207)
T ss_pred ------------CCccchhhH---HHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhC-----chhhccc
Confidence 334542222 2223333333444444433 3567999999999999999954 5689999
Q ss_pred EEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 527 ILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 527 IlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
|+++|.+|+..........+|+|++||+ .|++||...+.++++.+... .+++.++++||.++. ++++++.+|+
T Consensus 128 il~~g~~~~~~~~~~~~~~~pill~hG~---~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~--e~~~~~~~wl 202 (207)
T COG0400 128 ILFSGMLPLEPELLPDLAGTPILLSHGT---EDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPP--EELEAARSWL 202 (207)
T ss_pred hhcCCcCCCCCccccccCCCeEEEeccC---cCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCH--HHHHHHHHHH
Confidence 9999999988765567788999999999 89999999999999999864 466777889999966 8999999999
Q ss_pred HHhC
Q 007311 605 QRFL 608 (608)
Q Consensus 605 ~~~L 608 (608)
.+.+
T Consensus 203 ~~~~ 206 (207)
T COG0400 203 ANTL 206 (207)
T ss_pred Hhcc
Confidence 8753
No 9
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=99.82 E-value=3.6e-20 Score=161.82 Aligned_cols=101 Identities=52% Similarity=1.035 Sum_probs=84.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
|+.|+++++.+++++ ++++|||||++.||+.|||+| +++.+...+.+++..+.+....+++++
T Consensus 1 ~~~is~~~l~~~~~~-------------~~~~iiDvR~~~e~~~ghi~g----A~~ip~~~~~~~~~~~~~~~~~~~~~~ 63 (101)
T cd01518 1 GTYLSPAEWNELLED-------------PEVVLLDVRNDYEYDIGHFKG----AVNPDVDTFREFPFWLDENLDLLKGKK 63 (101)
T ss_pred CCcCCHHHHHHHHcC-------------CCEEEEEcCChhhhhcCEecc----ccCCCcccHhHhHHHHHhhhhhcCCCE
Confidence 578999999999965 478999999999999999999 566554444444444444334478999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
||+||.+|.||..|+.+|+++ ||+|||+|.|||.+|++
T Consensus 64 ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~GG~~~W~~ 101 (101)
T cd01518 64 VLMYCTGGIRCEKASAYLKER--GFKNVYQLKGGILKYLE 101 (101)
T ss_pred EEEECCCchhHHHHHHHHHHh--CCcceeeechhHHHHhC
Confidence 999999999999999999987 99999999999999975
No 10
>PRK11460 putative hydrolase; Provisional
Probab=99.81 E-value=1.1e-18 Score=175.58 Aligned_cols=186 Identities=18% Similarity=0.148 Sum_probs=129.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++++||+|||+|+|++.|......|.+.+. .+.++++++|.... ..++++||+...
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~-~~~~i~~~g~~~~~----------------------~~~g~~W~~~~~ 70 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPAFP-DALVVSVGGPEPSG----------------------NGAGRQWFSVQG 70 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHCC-CCEEECCCCCCCcC----------------------CCCCcccccCCC
Confidence 4457899999999999999966655655433 47899999984321 113678987321
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHh----Hh---CCceEEEecChhHHHHHHHHHHHhhhhCCCC
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS----QE---GPFDGILGFSQGAAMAASVCAQWERLKGEID 522 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~----~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~ 522 (608)
. +. .....++.+++..|.+.++ +. ...++|+||||||++|+.++... +..
T Consensus 71 ~---------------~~---~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----~~~ 127 (232)
T PRK11460 71 I---------------TE---DNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----PGL 127 (232)
T ss_pred C---------------Cc---cchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----CCc
Confidence 1 00 0112233444343333332 22 23568999999999999988743 445
Q ss_pred ccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE-eCCCCcCCCChhhHHH
Q 007311 523 FRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE-HDCGHIIPTRSPYIDE 599 (608)
Q Consensus 523 l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~-~~gGH~ip~~~~~~~~ 599 (608)
++++|+++|..+... ......+|+|++||+ +|++||.+.++++.+.++... ++... .++||.+.. ++++.
T Consensus 128 ~~~vv~~sg~~~~~~--~~~~~~~pvli~hG~---~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~--~~~~~ 200 (232)
T PRK11460 128 AGRVIAFSGRYASLP--ETAPTATTIHLIHGG---EDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDP--RLMQF 200 (232)
T ss_pred ceEEEEecccccccc--ccccCCCcEEEEecC---CCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCH--HHHHH
Confidence 778899999865332 233568999999999 899999999999999997532 44554 457999954 89999
Q ss_pred HHHHHHHhC
Q 007311 600 IKSFLQRFL 608 (608)
Q Consensus 600 i~~Fl~~~L 608 (608)
+.+||.++|
T Consensus 201 ~~~~l~~~l 209 (232)
T PRK11460 201 ALDRLRYTV 209 (232)
T ss_pred HHHHHHHHc
Confidence 999998765
No 11
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=99.69 E-value=8.9e-17 Score=140.00 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=75.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHH----Hh-hhhhcCC
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWI----DN-NAEQLQG 206 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~----~~-~~~~~k~ 206 (608)
|+++|+.++++++ ++++|||||++.||+.|||+| +++.+... +...+ ++ ....+++
T Consensus 1 is~~el~~~l~~~------------~~~~liDvR~~~e~~~ghi~g----a~~ip~~~---~~~~~~~~~~~~~~~~~~~ 61 (100)
T cd01523 1 LDPEDLYARLLAG------------QPLFILDVRNESDYERWKIDG----ENNTPYFD---PYFDFLEIEEDILDQLPDD 61 (100)
T ss_pred CCHHHHHHHHHcC------------CCcEEEEeCCHHHHhhcccCC----Cccccccc---chHHHHHhhHHHHhhCCCC
Confidence 5899999999763 568999999999999999999 55554322 22111 11 1234688
Q ss_pred CeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 207 KHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 207 k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++||+||.+|.||..|+..|++. ||+ ||+|+||+.+|.
T Consensus 62 ~~ivv~C~~G~rs~~aa~~L~~~--G~~-~~~l~GG~~~W~ 99 (100)
T cd01523 62 QEVTVICAKEGSSQFVAELLAER--GYD-VDYLAGGMKAWS 99 (100)
T ss_pred CeEEEEcCCCCcHHHHHHHHHHc--Cce-eEEeCCcHHhhc
Confidence 99999999999999999999987 998 999999999996
No 12
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=99.67 E-value=1.7e-16 Score=140.53 Aligned_cols=99 Identities=20% Similarity=0.247 Sum_probs=80.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++++.++++++ .+.+|||||++.||..|||+| +++.+. .++..+++. +...++++
T Consensus 9 ~~~i~~~~l~~~~~~~------------~~~~liDvR~~~e~~~ghIpg----ainip~---~~l~~~~~~-l~~~~~~~ 68 (109)
T cd01533 9 TPSVSADELAALQARG------------APLVVLDGRRFDEYRKMTIPG----SVSCPG---AELVLRVGE-LAPDPRTP 68 (109)
T ss_pred CCcCCHHHHHHHHhcC------------CCcEEEeCCCHHHHhcCcCCC----ceeCCH---HHHHHHHHh-cCCCCCCe
Confidence 4578999999999753 357899999999999999999 666553 334444433 22346889
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCc-EEEcCccHHHHHHh
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFEN-VFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~n-V~~L~GGi~~w~~~ 249 (608)
||+||.+|.|+..|+..|++. ||+| |++|.||+.+|...
T Consensus 69 ivv~C~~G~rs~~a~~~L~~~--G~~~~v~~l~gG~~~W~~~ 108 (109)
T cd01533 69 IVVNCAGRTRSIIGAQSLINA--GLPNPVAALRNGTQGWTLA 108 (109)
T ss_pred EEEECCCCchHHHHHHHHHHC--CCCcceeEecCCHHHHHhc
Confidence 999999999999999999987 9998 99999999999863
No 13
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=99.65 E-value=3.8e-16 Score=136.34 Aligned_cols=99 Identities=24% Similarity=0.406 Sum_probs=79.6
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
|+++|+.++++.. ..++++||||+..||+.+||+| +++.+.. ++..+++......++++||+
T Consensus 2 i~~~~l~~~~~~~-----------~~~~~iiDvR~~~e~~~~hI~g----a~~ip~~---~~~~~~~~~~~~~~~~~vv~ 63 (101)
T cd01528 2 ISVAELAEWLADE-----------REEPVLIDVREPEELEIAFLPG----FLHLPMS---EIPERSKELDSDNPDKDIVV 63 (101)
T ss_pred CCHHHHHHHHhcC-----------CCCCEEEECCCHHHHhcCcCCC----CEecCHH---HHHHHHHHhcccCCCCeEEE
Confidence 7899999999751 1368999999999999999999 5655533 33344433222246899999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
||.+|.|+..++.+|++. ||++|+.|+||+.+|.+.+
T Consensus 64 ~c~~g~rs~~~~~~l~~~--G~~~v~~l~GG~~~w~~~~ 100 (101)
T cd01528 64 LCHHGGRSMQVAQWLLRQ--GFENVYNLQGGIDAWSLEV 100 (101)
T ss_pred EeCCCchHHHHHHHHHHc--CCccEEEecCCHHHHhhhc
Confidence 999999999999999987 9999999999999998765
No 14
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.65 E-value=2.9e-15 Score=143.92 Aligned_cols=188 Identities=21% Similarity=0.244 Sum_probs=139.6
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++.+||+|||.|++...|. .+.+.|+ +++++|+|.||......+. .....+||+...
T Consensus 2 h~atIi~LHglGDsg~~~~----~~~~~l~l~NiKwIcP~aP~rpvt~~~------------------G~~~~aWfd~~~ 59 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWA----QFLKQLPLPNIKWICPTAPSRPVTLNG------------------GAFMNAWFDIME 59 (206)
T ss_pred ceEEEEEEecCCCCCccHH----HHHHcCCCCCeeEEcCCCCCCcccccC------------------CCcccceeccee
Confidence 4668999999999999998 6666677 7899999999966543332 123567999443
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC------CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG------PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~------~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
.. +. .+...+++..+.+.+...++++. ...+|.||||||++|+.++..+ +..+
T Consensus 60 ~~---------------~~-~~~d~~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~-----~~~l 118 (206)
T KOG2112|consen 60 LS---------------SD-APEDEEGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTY-----PKAL 118 (206)
T ss_pred eC---------------cc-cchhhhHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhcc-----cccc
Confidence 21 11 11135678888888888888752 2346889999999999999844 5678
Q ss_pred cEEEEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeCC-CCcCCCChhh
Q 007311 524 RFAILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHDC-GHIIPTRSPY 596 (608)
Q Consensus 524 ~~vIlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~g-GH~ip~~~~~ 596 (608)
.+++..+|+.|..... ......+|+++.||+ .|++||...++...+.+.... .+...+.+ +|..- +.+
T Consensus 119 ~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~---~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~--~~e 193 (206)
T KOG2112|consen 119 GGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGT---ADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS--PQE 193 (206)
T ss_pred ceeeccccccccchhhccCCccccCcchhheeccc---CCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc--HHH
Confidence 8999999999855431 111227999999999 999999999999888887543 33344444 89874 479
Q ss_pred HHHHHHHHHH
Q 007311 597 IDEIKSFLQR 606 (608)
Q Consensus 597 ~~~i~~Fl~~ 606 (608)
++++..|+.+
T Consensus 194 ~~~~~~~~~~ 203 (206)
T KOG2112|consen 194 LDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHHH
Confidence 9999999976
No 15
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=99.65 E-value=4.4e-16 Score=140.89 Aligned_cols=104 Identities=18% Similarity=0.323 Sum_probs=82.8
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh-------
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN------- 200 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~------- 200 (608)
....|+++|+.+++++. ++++|||||++.||+.|||+| +++.+...+ ..+....
T Consensus 6 ~~~~is~~el~~~~~~~------------~~~~ivDvR~~~e~~~~hIpg----ai~ip~~~~---~~~~~~~~~~~~~~ 66 (122)
T cd01526 6 PEERVSVKDYKNILQAG------------KKHVLLDVRPKVHFEICRLPE----AINIPLSEL---LSKAAELKSLQELP 66 (122)
T ss_pred cccccCHHHHHHHHhCC------------CCeEEEEcCCHHHhhcccCCC----CeEccHHHH---hhhhhhhhhhhhcc
Confidence 35678999999999763 478999999999999999999 555553322 2222111
Q ss_pred hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCC-CcEEEcCccHHHHHHhCCC
Q 007311 201 AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGF-ENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 201 ~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf-~nV~~L~GGi~~w~~~~~~ 252 (608)
....++++|++||.+|.|+.+++..|++. || ++|+.|+|||.+|.+++..
T Consensus 67 ~~~~~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~~v~~l~GG~~~W~~~~~~ 117 (122)
T cd01526 67 LDNDKDSPIYVVCRRGNDSQTAVRKLKEL--GLERFVRDIIGGLKAWADKVDP 117 (122)
T ss_pred cccCCCCcEEEECCCCCcHHHHHHHHHHc--CCccceeeecchHHHHHHHhCc
Confidence 12367899999999999999999999997 99 7999999999999988653
No 16
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=99.64 E-value=6.2e-16 Score=133.51 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
|+++|+.+++++. +++++|||||++.||+.|||+| +++.+.. ++..+... ....++++||+
T Consensus 1 is~~~l~~~~~~~-----------~~~~~liDvR~~~e~~~ghipg----a~~ip~~---~l~~~~~~-~~~~~~~~iv~ 61 (95)
T cd01534 1 IGAAELARWAAEG-----------DRTVYRFDVRTPEEYEAGHLPG----FRHTPGG---QLVQETDH-FAPVRGARIVL 61 (95)
T ss_pred CCHHHHHHHHHcC-----------CCCeEEEECCCHHHHHhCCCCC----cEeCCHH---HHHHHHHH-hcccCCCeEEE
Confidence 5889999999762 1368899999999999999999 5665532 23222222 12236789999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||.+|.||..++.+|+.. ||+ |+.|.||+.+|+
T Consensus 62 ~c~~G~rs~~aa~~L~~~--G~~-v~~l~GG~~~W~ 94 (95)
T cd01534 62 ADDDGVRADMTASWLAQM--GWE-VYVLEGGLAAAL 94 (95)
T ss_pred ECCCCChHHHHHHHHHHc--CCE-EEEecCcHHHhc
Confidence 999999999999999886 998 999999999996
No 17
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=99.61 E-value=1.3e-15 Score=136.85 Aligned_cols=99 Identities=23% Similarity=0.397 Sum_probs=78.9
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-ccccCCCCccccCcccccCCC------chHHHHhhhhhc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-IGKFRTPSVETLDPEIRQFSD------LPTWIDNNAEQL 204 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-~Gh~~g~~~~~l~~~~~~~~~------~~~~~~~~~~~~ 204 (608)
||++|+.+++++. +++++||||+++||+ .|||++ +++.+...+.+ +..++... ..
T Consensus 1 is~~el~~~l~~~------------~~~~vIDvR~~~e~~~~ghIpg----A~~ip~~~~~~~~~~~~~~~~l~~~--~~ 62 (117)
T cd01522 1 LTPAEAWALLQAD------------PQAVLVDVRTEAEWKFVGGVPD----AVHVAWQVYPDMEINPNFLAELEEK--VG 62 (117)
T ss_pred CCHHHHHHHHHhC------------CCeEEEECCCHHHHhcccCCCC----ceecchhhccccccCHHHHHHHHhh--CC
Confidence 5899999999863 579999999999999 999999 55554332221 12222221 25
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
++++||+||.+|.||.+++..|++. ||+||+.+.|||.+|...-
T Consensus 63 ~~~~ivv~C~~G~rs~~aa~~L~~~--G~~~v~~l~gG~~~~~~~~ 106 (117)
T cd01522 63 KDRPVLLLCRSGNRSIAAAEAAAQA--GFTNVYNVLEGFEGDLDAA 106 (117)
T ss_pred CCCeEEEEcCCCccHHHHHHHHHHC--CCCeEEECcCceecCCCCC
Confidence 8899999999999999999999987 9999999999999998653
No 18
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=99.61 E-value=2.8e-15 Score=136.91 Aligned_cols=97 Identities=22% Similarity=0.357 Sum_probs=74.0
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC---------------------
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--------------------- 190 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~--------------------- 190 (608)
||++|+++++++ +++|||||++.||+.|||+|+ ++.+....
T Consensus 1 ~s~~el~~~l~~--------------~~~iiDvR~~~e~~~ghIpgA----inip~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (128)
T cd01520 1 ITAEDLLALRKA--------------DGPLIDVRSPKEFFEGHLPGA----INLPLLDDEERALVGTLYKQQGREAAIEL 62 (128)
T ss_pred CCHHHHHHHHhc--------------CCEEEECCCHHHhccCcCCCc----EEccCCChhHHHHhhhheeccCHHHHHHH
Confidence 689999999863 579999999999999999994 44432111
Q ss_pred ------CCchHHHHhh--hhhcCCCeEEEEcC-CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 191 ------SDLPTWIDNN--AEQLQGKHVLMYCT-GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 191 ------~~~~~~~~~~--~~~~k~k~Iv~yCt-gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+++..+.+. ....++++||+||. +|.||..|+..|+.. || +|++|.|||.+|.+-
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~--G~-~v~~L~GG~~aw~~~ 127 (128)
T cd01520 63 GLELVSGKLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESL--GI-DVPLLEGGYKAYRKF 127 (128)
T ss_pred HHHHHhhhHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHc--CC-ceeEeCCcHHHHHhh
Confidence 0111222221 24578999999996 799999999999886 99 699999999999763
No 19
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=99.60 E-value=2.7e-15 Score=132.61 Aligned_cols=97 Identities=21% Similarity=0.344 Sum_probs=81.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
-+.++++|+.+++++ .++++||||++.||+.|||+| +++.+. .++..++.. ..++++
T Consensus 4 ~~~is~~el~~~l~~-------------~~~~ivDvR~~~e~~~ghi~g----A~~ip~---~~l~~~~~~---~~~~~~ 60 (108)
T PRK00162 4 FECINVEQAHQKLQE-------------GGAVLVDIRDPQSFAMGHAPG----AFHLTN---DSLGAFMRQ---ADFDTP 60 (108)
T ss_pred ccccCHHHHHHHHHc-------------CCCEEEEcCCHHHHhcCCCCC----CeECCH---HHHHHHHHh---cCCCCC
Confidence 457899999999975 358999999999999999999 555542 234444433 457899
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|++||.+|.|+..++..|+.. ||+||+.|+||+.+|.+..
T Consensus 61 ivv~c~~g~~s~~a~~~L~~~--G~~~v~~l~GG~~~w~~~~ 100 (108)
T PRK00162 61 VMVMCYHGNSSQGAAQYLLQQ--GFDVVYSIDGGFEAWRRTF 100 (108)
T ss_pred EEEEeCCCCCHHHHHHHHHHC--CchheEEecCCHHHHHhcC
Confidence 999999999999999999987 9999999999999998763
No 20
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=99.60 E-value=2.3e-15 Score=129.69 Aligned_cols=93 Identities=23% Similarity=0.413 Sum_probs=77.6
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc--cccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI--GKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~--Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
+|+++++.++++.+ .+++|||||+..||+. |||+| +++.+.. ++..++. ..+++++
T Consensus 1 ~i~~~~~~~~~~~~------------~~~~ivDvR~~~e~~~~~~hi~g----a~~ip~~---~~~~~~~---~~~~~~~ 58 (96)
T cd01444 1 RISVDELAELLAAG------------EAPVLLDVRDPASYAALPDHIPG----AIHLDED---SLDDWLG---DLDRDRP 58 (96)
T ss_pred CcCHHHHHHHHhcC------------CCcEEEECCCHHHHhcccCCCCC----CeeCCHH---HHHHHHh---hcCCCCC
Confidence 47899999998752 4689999999999999 99999 5655532 3444433 2458999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||+||.+|.|+..++..|+.. ||+||+.|+||+.+|.
T Consensus 59 ivv~c~~g~~s~~a~~~l~~~--G~~~v~~l~gG~~~w~ 95 (96)
T cd01444 59 VVVYCYHGNSSAQLAQALREA--GFTDVRSLAGGFEAWR 95 (96)
T ss_pred EEEEeCCCChHHHHHHHHHHc--CCceEEEcCCCHHHhc
Confidence 999999999999999999997 9999999999999996
No 21
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.58 E-value=5.1e-14 Score=144.65 Aligned_cols=168 Identities=17% Similarity=0.131 Sum_probs=117.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|. .+.+.|.+.++++.+|.| +.. ....+ .
T Consensus 26 ~plvllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G-------------------~S~~~--~--- 69 (276)
T TIGR02240 26 TPLLIFNGIGANLELVF----PFIEALDPDLEVIAFDVP--------GVG-------------------GSSTP--R--- 69 (276)
T ss_pred CcEEEEeCCCcchHHHH----HHHHHhccCceEEEECCC--------CCC-------------------CCCCC--C---
Confidence 56999999999999998 777777778999999988 110 00000 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
....++...+.+.++++..+ ....|+|||+||.+|+.+|.+.+ ..++++|++++
T Consensus 70 --------------------~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p-----~~v~~lvl~~~ 124 (276)
T TIGR02240 70 --------------------HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYP-----ERCKKLILAAT 124 (276)
T ss_pred --------------------CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCH-----HHhhheEEecc
Confidence 01134555566666666654 34579999999999999998653 34555555543
Q ss_pred CCCCc-------------------------------------c--c------------------------------cccC
Q 007311 532 FALHS-------------------------------------A--E------------------------------FEHR 542 (608)
Q Consensus 532 ~~~~~-------------------------------------~--~------------------------------~~~~ 542 (608)
..... . . ....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (276)
T TIGR02240 125 AAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLH 204 (276)
T ss_pred CCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhh
Confidence 32000 0 0 0124
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+++|+ +|+++|.+.++++++.+.+ .+++..++||.++.+.+ +.+.|.+|+.+
T Consensus 205 ~i~~P~lii~G~---~D~~v~~~~~~~l~~~~~~--~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 205 KIQQPTLVLAGD---DDPIIPLINMRLLAWRIPN--AELHIIDDGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred cCCCCEEEEEeC---CCCcCCHHHHHHHHHhCCC--CEEEEEcCCCchhhccHHHHHHHHHHHHHH
Confidence 788999999999 8999999999999999886 45555567999877643 67788888765
No 22
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=99.58 E-value=5.4e-15 Score=129.70 Aligned_cols=97 Identities=22% Similarity=0.356 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC-------CCchHHHHhhhhhc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF-------SDLPTWIDNNAEQL 204 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~-------~~~~~~~~~~~~~~ 204 (608)
||++++++++++. .++++|||||+..||+.|||+|+ ++.+...+ ..++. .. .+...
T Consensus 1 is~~~l~~~l~~~-----------~~~~~liDvR~~~e~~~ghIpgA----~~ip~~~~~~~~~~~~~~~~-~~-~~~~~ 63 (105)
T cd01525 1 ISVYDVIRLLDNS-----------PAKLAAVDIRSSPDFRRGHIEGS----INIPFSSVFLKEGELEQLPT-VP-RLENY 63 (105)
T ss_pred CCHHHHHHHHhCC-----------CCCeEEEECCCHHHHhCCccCCC----EeCCHHHhcccccccccccc-hH-HHHhh
Confidence 5899999999752 14689999999999999999994 44432211 12221 11 12223
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++++||+||.+|.|+..++..|+.. ||+|||.|.||+.+|+
T Consensus 64 ~~~~vv~~c~~g~~s~~~a~~L~~~--G~~~v~~l~GG~~a~~ 104 (105)
T cd01525 64 KGKIIVIVSHSHKHAALFAAFLVKC--GVPRVCILDGGINALK 104 (105)
T ss_pred cCCeEEEEeCCCccHHHHHHHHHHc--CCCCEEEEeCcHHHhc
Confidence 6889999999999999999999987 9999999999999995
No 23
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=99.58 E-value=2.9e-15 Score=131.57 Aligned_cols=96 Identities=24% Similarity=0.398 Sum_probs=73.9
Q ss_pred CHHHHHHHHH-ccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCC----chHHHHhhh---hhc
Q 007311 133 SAVEFHSILQ-STGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSD----LPTWIDNNA---EQL 204 (608)
Q Consensus 133 sp~e~~~~l~-~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~----~~~~~~~~~---~~~ 204 (608)
|++++.++++ . ++++|||||++.||+.|||++ +++.+...+.+ .+..+.+.. ...
T Consensus 2 ~~~~~~~~l~~~-------------~~~~iiDvR~~~e~~~ghIpg----A~~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (106)
T cd01519 2 SFEEVKNLPNPH-------------PNKVLIDVREPEELKTGKIPG----AINIPLSSLPDALALSEEEFEKKYGFPKPS 64 (106)
T ss_pred cHHHHHHhcCCC-------------CCEEEEECCCHHHHhcCcCCC----cEEechHHhhhhhCCCHHHHHHHhcccCCC
Confidence 6788888886 3 579999999999999999999 45444322211 011222211 235
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
++++||+||.+|.|+.+++.+|+.. ||+||+.|.||+.+|.
T Consensus 65 ~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~~~Gg~~~W~ 105 (106)
T cd01519 65 KDKELIFYCKAGVRSKAAAELARSL--GYENVGNYPGSWLDWA 105 (106)
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHc--CCccceecCCcHHHHc
Confidence 7899999999999999999999987 9999999999999995
No 24
>PLN02160 thiosulfate sulfurtransferase
Probab=99.58 E-value=8.7e-15 Score=135.01 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=77.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccC---CCc--hHHHHhhhh-
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF---SDL--PTWIDNNAE- 202 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~---~~~--~~~~~~~~~- 202 (608)
-..++++|+.+++++ +.+|||||++.||..|||+|+.+ ++.+...+ .++ +..+....+
T Consensus 14 ~~~i~~~e~~~~~~~--------------~~~lIDVR~~~E~~~ghIpgA~~--iniP~~~~~~~~~l~~~~~~~~~~~~ 77 (136)
T PLN02160 14 VVSVDVSQAKTLLQS--------------GHQYLDVRTQDEFRRGHCEAAKI--VNIPYMLNTPQGRVKNQEFLEQVSSL 77 (136)
T ss_pred eeEeCHHHHHHHHhC--------------CCEEEECCCHHHHhcCCCCCcce--ecccchhcCcccccCCHHHHHHHHhc
Confidence 457899999999864 35899999999999999999521 33332100 111 122222122
Q ss_pred hcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 203 QLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 203 ~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..++++||+||.+|.||..|+..|++. ||++||+|.||+.+|.++
T Consensus 78 ~~~~~~IivyC~sG~RS~~Aa~~L~~~--G~~~v~~l~GG~~~W~~~ 122 (136)
T PLN02160 78 LNPADDILVGCQSGARSLKATTELVAA--GYKKVRNKGGGYLAWVDH 122 (136)
T ss_pred cCCCCcEEEECCCcHHHHHHHHHHHHc--CCCCeeecCCcHHHHhhC
Confidence 357899999999999999999999987 999999999999999875
No 25
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily. They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).
Probab=99.57 E-value=3.6e-15 Score=134.84 Aligned_cols=105 Identities=17% Similarity=0.327 Sum_probs=78.3
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh---hhhcCCC
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN---AEQLQGK 207 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~---~~~~k~k 207 (608)
.|+++|+.+++++.. +...++++|||||++.||+.|||+| +++.+.. .++...+.+. +..++++
T Consensus 3 ~Is~~el~~~l~~~~-------~~~~~~~~liDvR~~~e~~~ghI~g----A~~ip~~--~~l~~~~~~~~~~~~~~~~~ 69 (121)
T cd01530 3 RISPETLARLLQGKY-------DNFFDKYIIIDCRFPYEYNGGHIKG----AVNLSTK--DELEEFFLDKPGVASKKKRR 69 (121)
T ss_pred ccCHHHHHHHHhccc-------ccCCCCEEEEECCCHHHHhCCcCCC----CEeCCcH--HHHHHHHHHhhcccccCCCC
Confidence 689999999997520 0012468999999999999999999 5554421 1233322211 1246899
Q ss_pred eEEEEcC-CCccHHHHHHHHHhcC----------CCCCcEEEcCccHHHHHH
Q 007311 208 HVLMYCT-GGIRCEMASAYVRSKG----------AGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 208 ~Iv~yCt-gGiR~~~a~~~L~~~~----------~Gf~nV~~L~GGi~~w~~ 248 (608)
+||+||. +|.|+.+|+.+|++.+ .||.+||.|+|||.+|.+
T Consensus 70 ~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~~ 121 (121)
T cd01530 70 VLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFFE 121 (121)
T ss_pred EEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhcC
Confidence 9999996 9999999999999731 389999999999999953
No 26
>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily. Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.
Probab=99.57 E-value=8.3e-15 Score=130.66 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=76.1
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
.+|+++|+++++... .+++++||||+. ||..|||+| +++.+...+......+.+.....++++|
T Consensus 2 ~~is~~~l~~~~~~~-----------~~~~~iiDvR~~-e~~~~hi~g----A~~ip~~~l~~~~~~~~~~~~~~~~~~i 65 (113)
T cd01531 2 SYISPAQLKGWIRNG-----------RPPFQVVDVRDE-DYAGGHIKG----SWHYPSTRFKAQLNQLVQLLSGSKKDTV 65 (113)
T ss_pred CcCCHHHHHHHHHcC-----------CCCEEEEEcCCc-ccCCCcCCC----CEecCHHHHhhCHHHHHHHHhcCCCCeE
Confidence 468999999999652 135789999999 999999999 5554433332222222222222578899
Q ss_pred EEEcC-CCccHHHHHHHHHhc----C--CCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCT-GGIRCEMASAYVRSK----G--AGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCt-gGiR~~~a~~~L~~~----~--~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||. +|.|+..|+..|.+. . .||+|||.|.|||.+|.+.
T Consensus 66 v~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~~ 112 (113)
T cd01531 66 VFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWESS 112 (113)
T ss_pred EEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHhh
Confidence 99997 889999998877541 0 2999999999999999875
No 27
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=99.56 E-value=1.2e-14 Score=126.31 Aligned_cols=93 Identities=15% Similarity=0.231 Sum_probs=76.3
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEE
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVL 210 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv 210 (608)
.++++|+.+++++ +.+|||||+..||..|||+| +++.+...+.+ . ....+++++||
T Consensus 3 ~i~~~el~~~~~~--------------~~~liDvR~~~e~~~~hi~g----a~~ip~~~~~~---~---~~~~~~~~~iv 58 (99)
T cd01527 3 TISPNDACELLAQ--------------GAVLVDIREPDEYLRERIPG----ARLVPLSQLES---E---GLPLVGANAII 58 (99)
T ss_pred ccCHHHHHHHHHC--------------CCEEEECCCHHHHHhCcCCC----CEECChhHhcc---c---ccCCCCCCcEE
Confidence 5799999999875 37899999999999999999 55544322221 1 12346789999
Q ss_pred EEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 211 MYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 211 ~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+||.+|.|+..++..|++. ||.||+.|.||+.+|...
T Consensus 59 ~~c~~g~~s~~~~~~L~~~--g~~~v~~l~gG~~~W~~~ 95 (99)
T cd01527 59 FHCRSGMRTQQNAERLAAI--SAGEAYVLEGGLDAWKAA 95 (99)
T ss_pred EEeCCCchHHHHHHHHHHc--CCccEEEeeCCHHHHHHC
Confidence 9999999999999999987 999999999999999864
No 28
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=99.55 E-value=1e-14 Score=126.02 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=66.8
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||||++.||+.|||+| +++.+...+.....+++......++++||+||.+|.|+..++.+|+.. ||+||
T Consensus 11 ~~~~iiDvR~~~~~~~~hIpg----A~~ip~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v 84 (96)
T cd01529 11 PGTALLDVRAEDEYAAGHLPG----KRSIPGAALVLRSQELQALEAPGRATRYVLTCDGSLLARFAAQELLAL--GGKPV 84 (96)
T ss_pred CCeEEEeCCCHHHHcCCCCCC----cEeCCHHHhcCCHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHc--CCCCE
Confidence 678999999999999999999 555443333222233322112367899999999999999999999886 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.|.||+.+|.
T Consensus 85 ~~l~GG~~~W~ 95 (96)
T cd01529 85 ALLDGGTSAWV 95 (96)
T ss_pred EEeCCCHHHhc
Confidence 99999999995
No 29
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.55 E-value=1.9e-13 Score=136.35 Aligned_cols=171 Identities=13% Similarity=0.117 Sum_probs=115.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.+++||++||+++++..|. .+.+.|.++++++.+|.| ... ..-..
T Consensus 12 ~~~~iv~lhG~~~~~~~~~----~~~~~l~~~~~vi~~D~~--------G~G-------------------~S~~~---- 56 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWA----PQLDVLTQRFHVVTYDHR--------GTG-------------------RSPGE---- 56 (257)
T ss_pred CCCEEEEEcCCCcchhHHH----HHHHHHHhccEEEEEcCC--------CCC-------------------CCCCC----
Confidence 3578999999999999998 555666667999999988 100 00000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. .....+++.++.+.++++..+ ....|+|+||||++|+.++...+ ..++++|++
T Consensus 57 --------------~------~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~v~~~i~~ 111 (257)
T TIGR03611 57 --------------L------PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYP-----ERLLSLVLI 111 (257)
T ss_pred --------------C------cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHCh-----HHhHHheee
Confidence 0 001234555666667776554 34579999999999999998543 357777777
Q ss_pred cCCCCCcc-----------------------------------------------------------------------c
Q 007311 530 SGFALHSA-----------------------------------------------------------------------E 538 (608)
Q Consensus 530 sG~~~~~~-----------------------------------------------------------------------~ 538 (608)
+++..... .
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (257)
T TIGR03611 112 NAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVS 191 (257)
T ss_pred cCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcH
Confidence 66432100 0
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+++++|+ +|.++|.+.++++++.+++. ..+...++||.+..+.+ ..+.|.+||+
T Consensus 192 ~~~~~i~~P~l~i~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 192 ARLDRIQHPVLLIANR---DDMLVPYTQSLRLAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcccCccEEEEecC---cCcccCHHHHHHHHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 0123678999999999 89999999999999988763 33344468999766433 4566666664
No 30
>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=99.53 E-value=2e-14 Score=127.16 Aligned_cols=103 Identities=20% Similarity=0.335 Sum_probs=79.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccccc----CCC-chHHHHhh--h
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ----FSD-LPTWIDNN--A 201 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~----~~~-~~~~~~~~--~ 201 (608)
-..++-++.+++++. +++++||||++.||..||++. +||.|... +.. -++.+.+. .
T Consensus 22 ~~sv~~~qvk~L~~~-------------~~~~llDVRepeEfk~gh~~~----siNiPy~~~~~~~~l~~~eF~kqvg~~ 84 (136)
T KOG1530|consen 22 PQSVSVEQVKNLLQH-------------PDVVLLDVREPEEFKQGHIPA----SINIPYMSRPGAGALKNPEFLKQVGSS 84 (136)
T ss_pred cEEEEHHHHHHHhcC-------------CCEEEEeecCHHHhhccCCcc----eEeccccccccccccCCHHHHHHhccc
Confidence 346788999999987 469999999999999999976 55554321 111 12222211 1
Q ss_pred hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 202 EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 202 ~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
....++.||+||.+|.|+-+|+..|.+. ||+||-++.||+.+|.+.-
T Consensus 85 kp~~d~eiIf~C~SG~Rs~~A~~~l~s~--Gyknv~ny~Gs~~~W~~k~ 131 (136)
T KOG1530|consen 85 KPPHDKEIIFGCASGVRSLKATKILVSA--GYKNVGNYPGSYLAWVDKG 131 (136)
T ss_pred CCCCCCcEEEEeccCcchhHHHHHHHHc--CcccccccCccHHHHHHcc
Confidence 2356789999999999999999999998 9999999999999999863
No 31
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=99.53 E-value=2.3e-14 Score=122.40 Aligned_cols=89 Identities=24% Similarity=0.449 Sum_probs=73.3
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEE
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLM 211 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~ 211 (608)
++|+|+.++++ ++.++||+|+..||..|||+| +++.+.. ++..++. ...++++||+
T Consensus 1 ~~~~e~~~~~~--------------~~~~iiD~R~~~~~~~~hipg----A~~ip~~---~~~~~~~---~~~~~~~vvl 56 (90)
T cd01524 1 VQWHELDNYRA--------------DGVTLIDVRTPQEFEKGHIKG----AINIPLD---ELRDRLN---ELPKDKEIIV 56 (90)
T ss_pred CCHHHHHHHhc--------------CCCEEEECCCHHHHhcCCCCC----CEeCCHH---HHHHHHH---hcCCCCcEEE
Confidence 47899999883 467999999999999999999 5665532 2333332 2357889999
Q ss_pred EcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 212 YCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 212 yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
||.+|.|+..++..|++. || +|+.|+||+.+|.
T Consensus 57 ~c~~g~~a~~~a~~L~~~--G~-~v~~l~GG~~~w~ 89 (90)
T cd01524 57 YCAVGLRGYIAARILTQN--GF-KVKNLDGGYKTYS 89 (90)
T ss_pred EcCCChhHHHHHHHHHHC--CC-CEEEecCCHHHhc
Confidence 999999999999999987 99 9999999999995
No 32
>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily. Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).
Probab=99.52 E-value=2.9e-14 Score=127.16 Aligned_cols=103 Identities=17% Similarity=0.310 Sum_probs=73.1
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhh---hhhcCC
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNN---AEQLQG 206 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~---~~~~k~ 206 (608)
+.|+++|+++++++. .....++++|||||+. ||+.|||+| +++.+... +..++.+. ....+.
T Consensus 2 ~~is~~el~~~l~~~-------~~~~~~~~~iiDvR~~-ef~~ghipg----Ai~ip~~~---~~~~~~~~~~~~~~~~~ 66 (113)
T cd01443 2 KYISPEELVALLENS-------DSNAGKDFVVVDLRRD-DYEGGHIKG----SINLPAQS---CYQTLPQVYALFSLAGV 66 (113)
T ss_pred cccCHHHHHHHHhCC-------ccccCCcEEEEECCch-hcCCCcccC----ceecchhH---HHHHHHHHHHHhhhcCC
Confidence 468999999999751 0000136899999999 999999999 56555333 33333221 122467
Q ss_pred CeEEEEcCC-CccHHHHHHHHHh----cCCCCCcEEEcCccHHHHH
Q 007311 207 KHVLMYCTG-GIRCEMASAYVRS----KGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 207 k~Iv~yCtg-GiR~~~a~~~L~~----~~~Gf~nV~~L~GGi~~w~ 247 (608)
++||+||.+ |.|+..++.+|++ .|.||.+||+|.|||.+|.
T Consensus 67 ~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~ 112 (113)
T cd01443 67 KLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY 112 (113)
T ss_pred CEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence 899999986 7999988877553 4445689999999999995
No 33
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=99.52 E-value=3.1e-14 Score=124.16 Aligned_cols=95 Identities=25% Similarity=0.475 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-hccccCCCCccccCcccccCCCchHHHHh-----hhhhcC
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-RIGKFRTPSVETLDPEIRQFSDLPTWIDN-----NAEQLQ 205 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~-----~~~~~k 205 (608)
|+++|+.+++++ ++.+|||||++.|+ ..|||+| +++.+.. .+..+.+. .....+
T Consensus 1 is~~el~~~~~~-------------~~~~iiDvR~~~~~~~~ghIpg----a~~ip~~---~~~~~~~~~~~~~~~~~~~ 60 (103)
T cd01447 1 LSPEDARALLGS-------------PGVLLVDVRDPRELERTGMIPG----AFHAPRG---MLEFWADPDSPYHKPAFAE 60 (103)
T ss_pred CCHHHHHHHHhC-------------CCeEEEECCCHHHHHhcCCCCC----cEEcccc---hhhhhcCccccccccCCCC
Confidence 578999999875 46899999999998 5799999 5554422 22222211 012458
Q ss_pred CCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 206 GKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 206 ~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
+++||+||.+|.|+..++..|+.. ||+||+.|.||+.+|.+
T Consensus 61 ~~~ivv~c~~g~~s~~~~~~l~~~--G~~~v~~l~Gg~~~w~~ 101 (103)
T cd01447 61 DKPFVFYCASGWRSALAGKTLQDM--GLKPVYNIEGGFKDWKE 101 (103)
T ss_pred CCeEEEEcCCCCcHHHHHHHHHHc--ChHHhEeecCcHHHHhh
Confidence 899999999999999999999987 99999999999999964
No 34
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.51 E-value=2e-13 Score=131.82 Aligned_cols=171 Identities=16% Similarity=0.158 Sum_probs=119.2
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
..+||||||.+|.++++ .|++.|. .++.+..|+.| ++. ..|-..-....+.|
T Consensus 16 ~AVLllHGFTGt~~Dvr----~Lgr~L~e~GyTv~aP~yp--------GHG--------~~~e~fl~t~~~DW------- 68 (243)
T COG1647 16 RAVLLLHGFTGTPRDVR----MLGRYLNENGYTVYAPRYP--------GHG--------TLPEDFLKTTPRDW------- 68 (243)
T ss_pred EEEEEEeccCCCcHHHH----HHHHHHHHCCceEecCCCC--------CCC--------CCHHHHhcCCHHHH-------
Confidence 67999999999999999 8888886 58899888877 111 00000000011223
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
|+++.+-...+.++.-+.+.|+|+||||.+|+.+|.+ .+++++|.+|.
T Consensus 69 -------------------------~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~-------~p~K~iv~m~a 116 (243)
T COG1647 69 -------------------------WEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYH-------YPPKKIVPMCA 116 (243)
T ss_pred -------------------------HHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhh-------CCccceeeecC
Confidence 2333333333332333566899999999999999994 35888999887
Q ss_pred CCCCccc---------------------------------------------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 532 FALHSAE---------------------------------------------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 532 ~~~~~~~---------------------------------------------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
..-.... .....|..|++++.|+ +|+
T Consensus 117 ~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~---~D~ 193 (243)
T COG1647 117 PVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGR---QDE 193 (243)
T ss_pred CcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecc---cCC
Confidence 6543211 2346789999999999 899
Q ss_pred ccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh---hHHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP---YIDEIKSFLQ 605 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~---~~~~i~~Fl~ 605 (608)
.||.+.+..+++.......++.++.+ ||.|-.+.+ ..++|.+||+
T Consensus 194 mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 99999999999999877677777765 888866533 4566777765
No 35
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.51 E-value=7.8e-13 Score=133.30 Aligned_cols=171 Identities=16% Similarity=0.182 Sum_probs=118.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++||++||++++...|. .+...|.+.++++++|.|- .. ...+..
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~----~~~~~l~~~~~vi~~D~~G--------~G------------------~s~~~~--- 60 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLG----VLARDLVNDHDIIQVDMRN--------HG------------------LSPRDP--- 60 (255)
T ss_pred CCCCCEEEECCCCCchhHHH----HHHHHHhhCCeEEEECCCC--------CC------------------CCCCCC---
Confidence 45678999999999999998 6666676679999999881 00 000000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
...+.+..+.+.++++..+ ....|+||||||++|+.+|.+. +..++++|+
T Consensus 61 ------------------------~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----~~~v~~lvl 111 (255)
T PRK10673 61 ------------------------VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALA-----PDRIDKLVA 111 (255)
T ss_pred ------------------------CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhC-----HhhcceEEE
Confidence 0134455556666666544 3358999999999999999854 456888888
Q ss_pred ecCCCCCc--------------------c--------------c---------------------------------ccc
Q 007311 529 CSGFALHS--------------------A--------------E---------------------------------FEH 541 (608)
Q Consensus 529 isG~~~~~--------------------~--------------~---------------------------------~~~ 541 (608)
+++.+... . . ...
T Consensus 112 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (255)
T PRK10673 112 IDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKI 191 (255)
T ss_pred EecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCccc
Confidence 75421110 0 0 012
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
..+++|+|+|+|+ +|+.++.+..+.+++.+++. ..++..++||..+.+.+ .++.|.+||..
T Consensus 192 ~~~~~P~l~i~G~---~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 192 PAWPHPALFIRGG---NSPYVTEAYRDDLLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCCCeEEEECC---CCCCCCHHHHHHHHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 3457899999999 89999999999999998873 33445567999776543 56788888764
No 36
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.51 E-value=8.9e-13 Score=130.02 Aligned_cols=172 Identities=21% Similarity=0.274 Sum_probs=127.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+++++|||-.|+++..|. +|...|+..++++.++.|= ...-+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr----~W~~~lp~~iel~avqlPG----------------------------R~~r~~e-- 50 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFR----SWSRRLPADIELLAVQLPG----------------------------RGDRFGE-- 50 (244)
T ss_pred CCCceEEEecCCCCCHHHHH----HHHhhCCchhheeeecCCC----------------------------cccccCC--
Confidence 45678999999999999999 9999999999999999881 1111111
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....+++..++.|...|.. ..|+ .++||||||++|..+|.+.++... . ...+
T Consensus 51 ----------------------p~~~di~~Lad~la~el~~~~~d~P~-alfGHSmGa~lAfEvArrl~~~g~-~-p~~l 105 (244)
T COG3208 51 ----------------------PLLTDIESLADELANELLPPLLDAPF-ALFGHSMGAMLAFEVARRLERAGL-P-PRAL 105 (244)
T ss_pred ----------------------cccccHHHHHHHHHHHhccccCCCCe-eecccchhHHHHHHHHHHHHHcCC-C-cceE
Confidence 1234677777888777762 2344 899999999999999998876332 2 5555
Q ss_pred EEecCCCCCccc----------------------------------------------------cccCCCCCCEEEEEcC
Q 007311 527 ILCSGFALHSAE----------------------------------------------------FEHRSINCPSLHIFGG 554 (608)
Q Consensus 527 IlisG~~~~~~~----------------------------------------------------~~~~~i~~PvL~i~G~ 554 (608)
.+.++..|.... .....+.+|+..+.|+
T Consensus 106 fisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~ 185 (244)
T COG3208 106 FISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGE 185 (244)
T ss_pred EEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccC
Confidence 555555552210 1245889999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHH
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQR 606 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~ 606 (608)
+|..|..+....+.++.+.. .++..++|||+++.. ..+++.++|.+
T Consensus 186 ---~D~~vs~~~~~~W~~~t~~~-f~l~~fdGgHFfl~~--~~~~v~~~i~~ 231 (244)
T COG3208 186 ---KDHEVSRDELGAWREHTKGD-FTLRVFDGGHFFLNQ--QREEVLARLEQ 231 (244)
T ss_pred ---cchhccHHHHHHHHHhhcCC-ceEEEecCcceehhh--hHHHHHHHHHH
Confidence 89999999999999998865 899999999998773 34455555544
No 37
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=99.51 E-value=7.6e-14 Score=132.52 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=76.2
Q ss_pred CCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChh----hhhcc---------ccCCCCccccCcccccCCCc
Q 007311 127 NAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLY----ETRIG---------KFRTPSVETLDPEIRQFSDL 193 (608)
Q Consensus 127 ~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~----E~~~G---------h~~g~~~~~l~~~~~~~~~~ 193 (608)
.....|+++|+++++++ ++++|||||+.. |+..| ||+|+ ++.+...+.++
T Consensus 33 ~~~~~vs~~el~~~l~~-------------~~~~lIDVR~~~~~~~e~~~G~~~~~~~~~HIPGA----v~ip~~~~~~l 95 (162)
T TIGR03865 33 KGARVLDTEAAQALLAR-------------GPVALIDVYPRPPKPKNLLEGTVWRDEPRLNIPGS----LWLPNTGYGNL 95 (162)
T ss_pred CCccccCHHHHHHHHhC-------------CCcEEEECCCCccccccccccceeccccCCCCCCc----EEecccCCCCC
Confidence 34678999999999976 468899999865 45444 89994 43321112222
Q ss_pred h--------HHHHhhhhhcCCCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 194 P--------TWIDNNAEQLQGKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 194 ~--------~~~~~~~~~~k~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
. ..+.+.....++++||+||.+|. ||.+++..|+.. ||+|||+|.||+.+|.++
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~--G~~~V~~l~GG~~aW~~a 158 (162)
T TIGR03865 96 APAWQAYFRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAY--GYSNVYWYPDGTDGWQAA 158 (162)
T ss_pred CCchhHHHHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhc--CCcceEEecCCHHHHHHc
Confidence 2 11211112258999999999997 899999999987 999999999999999864
No 38
>PHA02857 monoglyceride lipase; Provisional
Probab=99.50 E-value=1e-12 Score=134.60 Aligned_cols=173 Identities=16% Similarity=0.105 Sum_probs=112.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..++.||++||+++++..|. .+.+.|. .++.++.+|.| ++. . +....
T Consensus 23 ~~~~~v~llHG~~~~~~~~~----~~~~~l~~~g~~via~D~~--------G~G------~-------S~~~~------- 70 (276)
T PHA02857 23 YPKALVFISHGAGEHSGRYE----ELAENISSLGILVFSHDHI--------GHG------R-------SNGEK------- 70 (276)
T ss_pred CCCEEEEEeCCCccccchHH----HHHHHHHhCCCEEEEccCC--------CCC------C-------CCCcc-------
Confidence 34567888899999999999 5566664 37999999988 110 0 00000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH----hC-CceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ----EG-PFDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~----~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
.+ ..++...++.+.+.+.. .. ....|+|+||||++|+.+|.+. +..+
T Consensus 71 ----------------~~-------~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~-----p~~i 122 (276)
T PHA02857 71 ----------------MM-------IDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-----PNLF 122 (276)
T ss_pred ----------------CC-------cCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC-----cccc
Confidence 00 01122222222222221 12 2247999999999999999743 4568
Q ss_pred cEEEEecCCCCCc--------------------------cc---------------------------------------
Q 007311 524 RFAILCSGFALHS--------------------------AE--------------------------------------- 538 (608)
Q Consensus 524 ~~vIlisG~~~~~--------------------------~~--------------------------------------- 538 (608)
+++|++++..... ..
T Consensus 123 ~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (276)
T PHA02857 123 TAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVR 202 (276)
T ss_pred ceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHH
Confidence 9999988742100 00
Q ss_pred cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh-----hHHHHHHHHHH
Q 007311 539 FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP-----YIDEIKSFLQR 606 (608)
Q Consensus 539 ~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~-----~~~~i~~Fl~~ 606 (608)
....++++|+|++||+ +|.++|.+.++++.+.+... .+++. .++||.+..+.+ ..+++.+||.+
T Consensus 203 ~~l~~i~~Pvliv~G~---~D~i~~~~~~~~l~~~~~~~-~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 203 KIIPKIKTPILILQGT---NNEISDVSGAYYFMQHANCN-REIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred HhcccCCCCEEEEecC---CCCcCChHHHHHHHHHccCC-ceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 1234788999999999 89999999999999887543 55544 457999876533 45677777765
No 39
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=99.50 E-value=2.9e-14 Score=127.80 Aligned_cols=97 Identities=22% Similarity=0.258 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc-----------cccCCCCccccCcccccCCC------ch
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI-----------GKFRTPSVETLDPEIRQFSD------LP 194 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~-----------Gh~~g~~~~~l~~~~~~~~~------~~ 194 (608)
++++++.+++++ ++++|||||+..||.. |||+| +++.+...+.. .+
T Consensus 1 ~s~~~l~~~l~~-------------~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpg----A~~~p~~~~~~~~~~~~~~ 63 (118)
T cd01449 1 VTAEEVLANLDS-------------GDVQLVDARSPERFRGEVPEPRPGLRSGHIPG----AVNIPWTSLLDEDGTFKSP 63 (118)
T ss_pred CCHHHHHHhcCC-------------CCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCC----CcccChHHhcCCCCCcCCH
Confidence 478899988864 4689999999999976 99999 44443222111 12
Q ss_pred HHHHhh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 195 TWIDNN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 195 ~~~~~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
+.+.+. ....++++||+||++|.||..++..|+.. ||+||+.|.||+.+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~--G~~~v~~l~GG~~~W~ 117 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELL--GYKNVRLYDGSWSEWG 117 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCeeeeCChHHHhc
Confidence 233322 22357899999999999999999999987 9999999999999995
No 40
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=6.8e-13 Score=137.47 Aligned_cols=174 Identities=17% Similarity=0.119 Sum_probs=116.3
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+.||+|||++++...|. .+...|.+.++++++|.| +..+ ..+. .+
T Consensus 30 ~~vlllHG~~~~~~~w~----~~~~~L~~~~~vi~~DlpG~G~S----------------------~~~~-~~------- 75 (294)
T PLN02824 30 PALVLVHGFGGNADHWR----KNTPVLAKSHRVYAIDLLGYGYS----------------------DKPN-PR------- 75 (294)
T ss_pred CeEEEECCCCCChhHHH----HHHHHHHhCCeEEEEcCCCCCCC----------------------CCCc-cc-------
Confidence 57999999999999999 555555556899999988 1100 0000 00
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.++. .....+++..+.|.++|+..+ ....|+||||||++|+.+|+++ +..++++|+++
T Consensus 76 ------------~~~~----~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~-----p~~v~~lili~ 134 (294)
T PLN02824 76 ------------SAPP----NSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDA-----PELVRGVMLIN 134 (294)
T ss_pred ------------cccc----cccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC-----hhheeEEEEEC
Confidence 0000 011245566667777776543 4457999999999999999954 45688888877
Q ss_pred CCCCC----------cc----------------------------------------c----------------------
Q 007311 531 GFALH----------SA----------------------------------------E---------------------- 538 (608)
Q Consensus 531 G~~~~----------~~----------------------------------------~---------------------- 538 (608)
+.... .. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
T PLN02824 135 ISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVF 214 (294)
T ss_pred CCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHH
Confidence 53210 00 0
Q ss_pred -------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh--hHHHHHH
Q 007311 539 -------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP--YIDEIKS 602 (608)
Q Consensus 539 -------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--~~~~i~~ 602 (608)
.....+++|+|+|+|+ +|..+|.+.++++.+.... .++++ .++||..+.+.+ ..+.|.+
T Consensus 215 ~~~~~~~~~~~~~~~l~~i~~P~lvi~G~---~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~ 289 (294)
T PLN02824 215 LDFISYSGGPLPEELLPAVKCPVLIAWGE---KDPWEPVELGRAYANFDAV--EDFIVLPGVGHCPQDEAPELVNPLIES 289 (294)
T ss_pred HHHhccccccchHHHHhhcCCCeEEEEec---CCCCCChHHHHHHHhcCCc--cceEEeCCCCCChhhhCHHHHHHHHHH
Confidence 0123578999999999 8999999999998877654 34444 467999776533 5677777
Q ss_pred HHHH
Q 007311 603 FLQR 606 (608)
Q Consensus 603 Fl~~ 606 (608)
||.+
T Consensus 290 fl~~ 293 (294)
T PLN02824 290 FVAR 293 (294)
T ss_pred HHhc
Confidence 7764
No 41
>PLN02965 Probable pheophorbidase
Probab=99.49 E-value=1.3e-12 Score=132.61 Aligned_cols=169 Identities=13% Similarity=0.111 Sum_probs=116.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.|||+||++.+...|. .+.+.| ..+++++.+|.| . +.+=+.+
T Consensus 5 ~vvllHG~~~~~~~w~----~~~~~L~~~~~~via~Dl~--------G---------------------~G~S~~~---- 47 (255)
T PLN02965 5 HFVFVHGASHGAWCWY----KLATLLDAAGFKSTCVDLT--------G---------------------AGISLTD---- 47 (255)
T ss_pred EEEEECCCCCCcCcHH----HHHHHHhhCCceEEEecCC--------c---------------------CCCCCCC----
Confidence 4999999999999999 444445 457999999988 1 1100000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ .....+++..+.|.++++..+ ....++||||||++|+.++... +..++++|+++
T Consensus 48 --------------~----~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~-----p~~v~~lvl~~ 104 (255)
T PLN02965 48 --------------S----NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKF-----TDKISMAIYVA 104 (255)
T ss_pred --------------c----cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhC-----chheeEEEEEc
Confidence 0 001235667777888888764 2558999999999999999854 45677777766
Q ss_pred CCCCC------------------------------c-------cc-----------------------c-----------
Q 007311 531 GFALH------------------------------S-------AE-----------------------F----------- 539 (608)
Q Consensus 531 G~~~~------------------------------~-------~~-----------------------~----------- 539 (608)
+..+. . .. .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (255)
T PLN02965 105 AAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDK 184 (255)
T ss_pred cccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhh
Confidence 53100 0 00 0
Q ss_pred ---ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 540 ---EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 540 ---~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
....+++|+++++|+ +|.++|++.++++++.+++. ..++..++||.+..+.+ +.+.|.+|++.
T Consensus 185 ~~~~~~~i~vP~lvi~g~---~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 185 LPPNPEAEKVPRVYIKTA---KDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred ccchhhcCCCCEEEEEcC---CCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 012589999999999 89999999999999999873 33344567999776543 56777777654
No 42
>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family.; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....
Probab=99.48 E-value=1.3e-13 Score=121.75 Aligned_cols=98 Identities=24% Similarity=0.413 Sum_probs=74.6
Q ss_pred CHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccccc-----CCCchHHHHhh-----hh
Q 007311 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQ-----FSDLPTWIDNN-----AE 202 (608)
Q Consensus 133 sp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~-----~~~~~~~~~~~-----~~ 202 (608)
||+|+.++++. ++++|||||+..||+.|||+|+ ++.+... ...++..+... ..
T Consensus 1 s~~el~~~l~~-------------~~~~liD~R~~~~~~~~hI~ga----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (113)
T PF00581_consen 1 SPEELKEMLEN-------------ESVLLIDVRSPEEYERGHIPGA----VNIPFPSLDPDEPSLSEDKLDEFLKELGKK 63 (113)
T ss_dssp -HHHHHHHHTT-------------TTEEEEEESSHHHHHHSBETTE----EEEEGGGGSSSSSBCHHHHHHHHHHHHTHG
T ss_pred CHHHHHhhhhC-------------CCeEEEEeCCHHHHHcCCCCCC----cccccccccccccccccccccccccccccc
Confidence 68999999933 6899999999999999999994 4443311 11122222211 12
Q ss_pred hcCCCeEEEEcCCCccHHHHHHH-----HHhcCCCCCcEEEcCccHHHHHHh
Q 007311 203 QLQGKHVLMYCTGGIRCEMASAY-----VRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 203 ~~k~k~Iv~yCtgGiR~~~a~~~-----L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
..++++||+||.+|.|+..+++. |++. ||++|+.|+||+.+|.++
T Consensus 64 ~~~~~~iv~yc~~~~~~~~~~~~~~~~~l~~~--g~~~v~~l~GG~~~w~~~ 113 (113)
T PF00581_consen 64 IDKDKDIVFYCSSGWRSGSAAAARVAWILKKL--GFKNVYILDGGFEAWKAE 113 (113)
T ss_dssp STTTSEEEEEESSSCHHHHHHHHHHHHHHHHT--TTSSEEEETTHHHHHHHH
T ss_pred ccccccceeeeecccccchhHHHHHHHHHHHc--CCCCEEEecChHHHHhcC
Confidence 36888999999999999998887 8875 999999999999999874
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.47 E-value=1.3e-12 Score=128.66 Aligned_cols=163 Identities=18% Similarity=0.211 Sum_probs=110.2
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||+|++...|. .+...|.+.++++.+|.| ... . +. . .
T Consensus 5 ~~iv~~HG~~~~~~~~~----~~~~~l~~~~~vi~~d~~--------G~G------~-------s~--~--~-------- 47 (245)
T TIGR01738 5 VHLVLIHGWGMNAEVFR----CLDEELSAHFTLHLVDLP--------GHG------R-------SR--G--F-------- 47 (245)
T ss_pred ceEEEEcCCCCchhhHH----HHHHhhccCeEEEEecCC--------cCc------c-------CC--C--C--------
Confidence 57999999999999998 777777777999999987 100 0 00 0 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
...++++.++.+.+.+ .....++||||||.+|+.++.+. +..++++|++++.
T Consensus 48 --------------------~~~~~~~~~~~~~~~~---~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~ 99 (245)
T TIGR01738 48 --------------------GPLSLADAAEAIAAQA---PDPAIWLGWSLGGLVALHIAATH-----PDRVRALVTVASS 99 (245)
T ss_pred --------------------CCcCHHHHHHHHHHhC---CCCeEEEEEcHHHHHHHHHHHHC-----HHhhheeeEecCC
Confidence 0112444444444443 23457999999999999999854 3457777777654
Q ss_pred CCCc-----c-------------------c--------------------------------------------------
Q 007311 533 ALHS-----A-------------------E-------------------------------------------------- 538 (608)
Q Consensus 533 ~~~~-----~-------------------~-------------------------------------------------- 538 (608)
+... . .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (245)
T TIGR01738 100 PCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVD 179 (245)
T ss_pred cccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhccc
Confidence 3110 0 0
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHh
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
....++++|+|+++|+ +|..+|.+..+.+++.+++ .+++.. ++||.+..+ ..+++.+-|.+|
T Consensus 180 ~~~~l~~i~~Pvlii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e--~p~~~~~~i~~f 244 (245)
T TIGR01738 180 LRQPLQNISVPFLRLYGY---LDGLVPAKVVPYLDKLAPH--SELYIFAKAAHAPFLS--HAEAFCALLVAF 244 (245)
T ss_pred HHHHHhcCCCCEEEEeec---CCcccCHHHHHHHHHhCCC--CeEEEeCCCCCCcccc--CHHHHHHHHHhh
Confidence 0124789999999999 8999999999999988876 555555 579998774 344444444444
No 44
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.47 E-value=1.7e-12 Score=138.27 Aligned_cols=63 Identities=24% Similarity=0.278 Sum_probs=48.5
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh------hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP------YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~------~~~~i~~Fl~~~ 607 (608)
..+++|+|++||+ +|.++|.+.++++++.+.....+++.+ ++||.+..+.+ .++.|.+||.++
T Consensus 276 ~~i~~P~Lii~G~---~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 276 EEVSLPLLILHGE---ADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred ccCCCCEEEEEeC---CCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHh
Confidence 4689999999999 899999999999998885433555555 46999865432 567788898765
No 45
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.46 E-value=1.3e-12 Score=132.31 Aligned_cols=163 Identities=17% Similarity=0.198 Sum_probs=110.0
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|. .+.+.|.+.++++.+|-| +.. . +. .| +
T Consensus 14 ~~ivllHG~~~~~~~w~----~~~~~L~~~~~vi~~Dl~--------G~G------~-------S~----~~-~------ 57 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWR----CIDEELSSHFTLHLVDLP--------GFG------R-------SR----GF-G------ 57 (256)
T ss_pred CeEEEECCCCCChhHHH----HHHHHHhcCCEEEEecCC--------CCC------C-------CC----CC-C------
Confidence 46999999999999999 566666667999999988 110 0 00 00 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
...+++.++.+.+. ......++|||+||.+|+.+|.+. +..++++|++++.
T Consensus 58 ---------------------~~~~~~~~~~l~~~---~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lili~~~ 108 (256)
T PRK10349 58 ---------------------ALSLADMAEAVLQQ---APDKAIWLGWSLGGLVASQIALTH-----PERVQALVTVASS 108 (256)
T ss_pred ---------------------CCCHHHHHHHHHhc---CCCCeEEEEECHHHHHHHHHHHhC-----hHhhheEEEecCc
Confidence 01233334444332 223447999999999999998854 4567888887653
Q ss_pred CCCcc------------------------c--------------------------------------------------
Q 007311 533 ALHSA------------------------E-------------------------------------------------- 538 (608)
Q Consensus 533 ~~~~~------------------------~-------------------------------------------------- 538 (608)
+.... .
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (256)
T PRK10349 109 PCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDL 188 (256)
T ss_pred cceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCcc
Confidence 21100 0
Q ss_pred -cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 -FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 -~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|.++|.+.++.+.+.+++ .++++ .++||.++.+.+ +.+.+.+|-+
T Consensus 189 ~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~i~~--~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 189 RQPLQNVSMPFLRLYGY---LDGLVPRKVVPMLDKLWPH--SESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred HHHHhhcCCCeEEEecC---CCccCCHHHHHHHHHhCCC--CeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 1134678999999999 8999999999999999886 44444 467999887643 4566666543
No 46
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=99.46 E-value=1.1e-13 Score=118.69 Aligned_cols=88 Identities=27% Similarity=0.380 Sum_probs=68.1
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchH--------HHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHh
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPT--------WIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRS 228 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~--------~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~ 228 (608)
++++|||||+..||+.|||+|+ ++.+...+..... .........++++||+||.+|.|+..++.+|++
T Consensus 3 ~~~~ivDvR~~~e~~~~hi~ga----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~ 78 (100)
T smart00450 3 EKVVLLDVRSPEEYEGGHIPGA----VNIPLSELLDRRGELDILEFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRE 78 (100)
T ss_pred CCEEEEECCCHHHhccCCCCCc----eeCCHHHhccCCCCcCHHHHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHH
Confidence 5789999999999999999994 4443222221110 011123456889999999999999999999998
Q ss_pred cCCCCCcEEEcCccHHHHHHhC
Q 007311 229 KGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 229 ~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
. ||++||.|.||+.+|.++.
T Consensus 79 ~--G~~~v~~l~GG~~~w~~~~ 98 (100)
T smart00450 79 L--GFKNVYLLDGGYKEWSAAG 98 (100)
T ss_pred c--CCCceEEecCCHHHHHhcC
Confidence 7 9999999999999998764
No 47
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.46 E-value=1.4e-12 Score=128.87 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=111.2
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.||++||+|.+...|. .+...|..+++++.+|.| ... . ..+ .
T Consensus 12 ~~~~li~~hg~~~~~~~~~----~~~~~l~~~~~v~~~d~~--------G~G------~------------s~~-~---- 56 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWD----PVLPALTPDFRVLRYDKR--------GHG------L------------SDA-P---- 56 (251)
T ss_pred CCCeEEEEcCcccchhhHH----HHHHHhhcccEEEEecCC--------CCC------C------------CCC-C----
Confidence 4578999999999999998 666777778999999988 100 0 000 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
....++...++.+.+.++... ....|+|||+||++|+.+|.+.+ ..++++|++
T Consensus 57 ---------------------~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p-----~~v~~li~~ 110 (251)
T TIGR02427 57 ---------------------EGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRP-----DRVRALVLS 110 (251)
T ss_pred ---------------------CCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCH-----HHhHHHhhc
Confidence 001134455556666666543 34579999999999999998642 335555554
Q ss_pred cCCCCC-------------------------------------cc------------------------------ccccC
Q 007311 530 SGFALH-------------------------------------SA------------------------------EFEHR 542 (608)
Q Consensus 530 sG~~~~-------------------------------------~~------------------------------~~~~~ 542 (608)
++.... .. .....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (251)
T TIGR02427 111 NTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLG 190 (251)
T ss_pred cCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhh
Confidence 422110 00 01123
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
++++|+++++|+ +|..+|.+..+.+.+.+++ ..++.. ++||.+..+ ..+.+.+.+..|
T Consensus 191 ~~~~Pvlii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~--~p~~~~~~i~~f 249 (251)
T TIGR02427 191 AIAVPTLCIAGD---QDGSTPPELVREIADLVPG--ARFAEIRGAGHIPCVE--QPEAFNAALRDF 249 (251)
T ss_pred hcCCCeEEEEec---cCCcCChHHHHHHHHhCCC--ceEEEECCCCCccccc--ChHHHHHHHHHH
Confidence 578999999999 8999999999999888876 455555 579987663 334555554444
No 48
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=99.45 E-value=2.4e-13 Score=120.63 Aligned_cols=98 Identities=18% Similarity=0.273 Sum_probs=77.0
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++|+.++++.. .++++|||||+..||..|||+| +++.+... +..+ .....+++++
T Consensus 7 ~~~~s~~el~~~l~~~-----------~~~~~iiDvR~~~e~~~ghIpg----A~~ip~~~---l~~~--~~~~i~~~~~ 66 (110)
T cd01521 7 AFETDCWDVAIALKNG-----------KPDFVLVDVRSAEAYARGHVPG----AINLPHRE---ICEN--ATAKLDKEKL 66 (110)
T ss_pred eeecCHHHHHHHHHcC-----------CCCEEEEECCCHHHHhcCCCCC----CEeCCHHH---hhhH--hhhcCCCCCe
Confidence 5678999999999752 1358999999999999999999 55544222 2211 1123468899
Q ss_pred EEEEcCCC--ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 209 VLMYCTGG--IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 209 Iv~yCtgG--iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
||+||.+| .|+..++..|++. || +|+.|.||+.+|.+.
T Consensus 67 vvvyc~~g~~~~s~~~a~~l~~~--G~-~v~~l~GG~~~W~~~ 106 (110)
T cd01521 67 FVVYCDGPGCNGATKAALKLAEL--GF-PVKEMIGGLDWWKRE 106 (110)
T ss_pred EEEEECCCCCchHHHHHHHHHHc--CC-eEEEecCCHHHHHHC
Confidence 99999988 4899999999987 99 599999999999875
No 49
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=99.45 E-value=1.9e-13 Score=120.46 Aligned_cols=85 Identities=27% Similarity=0.438 Sum_probs=67.7
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++.+|||||++.||+.+|++++ +++.+. ++++....... .+++++|++||.+|.||..|+.+|+++ ||++|
T Consensus 19 ~~~~liDvR~~~e~~~~~i~~~---~~~ip~---~~~~~~~~~~~-~~~~~~ivv~C~~G~rS~~aa~~L~~~--G~~~~ 89 (110)
T COG0607 19 EDAVLLDVREPEEYERGHIPGA---AINIPL---SELKAAENLLE-LPDDDPIVVYCASGVRSAAAAAALKLA--GFTNV 89 (110)
T ss_pred CCCEEEeccChhHhhhcCCCcc---eeeeec---ccchhhhcccc-cCCCCeEEEEeCCCCChHHHHHHHHHc--CCccc
Confidence 6799999999999999999982 223332 23333222111 458999999999999999999999998 99999
Q ss_pred EEcCccHHHHHHhC
Q 007311 237 FQLYGGIQRYLEQF 250 (608)
Q Consensus 237 ~~L~GGi~~w~~~~ 250 (608)
++|.|||.+|....
T Consensus 90 ~~l~gG~~~w~~~~ 103 (110)
T COG0607 90 YNLDGGIDAWKGAG 103 (110)
T ss_pred cccCCcHHHHHhcC
Confidence 99999999998864
No 50
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=99.45 E-value=2.6e-13 Score=122.47 Aligned_cols=103 Identities=25% Similarity=0.238 Sum_probs=75.4
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh-------hhhhccccCCCCccccCcccccC----CCc--hHHHH
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL-------YETRIGKFRTPSVETLDPEIRQF----SDL--PTWID 198 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~-------~E~~~Gh~~g~~~~~l~~~~~~~----~~~--~~~~~ 198 (608)
++++++.+++++ ++++|||||+. .||+.|||+|+...++....... ..+ ++.+.
T Consensus 2 i~~~~l~~~l~~-------------~~~~ivDvR~~~~~~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~ 68 (122)
T cd01448 2 VSPDWLAEHLDD-------------PDVRILDARWYLPDRDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFA 68 (122)
T ss_pred cCHHHHHHHhCC-------------CCeEEEEeecCCCCCchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHH
Confidence 689999999865 46899999999 99999999995432221111000 001 11222
Q ss_pred hh---hhhcCCCeEEEEcCC-CccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 199 NN---AEQLQGKHVLMYCTG-GIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 199 ~~---~~~~k~k~Iv~yCtg-GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+. ...+++++||+||.+ |.|+..++..|+.. ||+||+.|.||+.+|...
T Consensus 69 ~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~--G~~~v~~l~GG~~~W~~~ 121 (122)
T cd01448 69 ELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYF--GHENVRVLDGGLQAWKAE 121 (122)
T ss_pred HHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHc--CCCCEEEecCCHHHHHhC
Confidence 22 234689999999988 59999999999987 999999999999999763
No 51
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.44 E-value=5.5e-12 Score=128.16 Aligned_cols=168 Identities=21% Similarity=0.217 Sum_probs=112.7
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.|||+||++.+...|. .+.+.|...++++.+|.| ... . + ..+.
T Consensus 28 ~~~vv~~hG~~~~~~~~~----~~~~~l~~~~~vi~~D~~--------G~G------~-----S--~~~~---------- 72 (278)
T TIGR03056 28 GPLLLLLHGTGASTHSWR----DLMPPLARSFRVVAPDLP--------GHG------F-----T--RAPF---------- 72 (278)
T ss_pred CCeEEEEcCCCCCHHHHH----HHHHHHhhCcEEEeecCC--------CCC------C-----C--CCcc----------
Confidence 467999999999999999 566666667999999987 100 0 0 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++...+.+.++++..+ ....|+||||||++|+.++.+. +..++++|+++
T Consensus 73 --------------------~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~v~~~ 127 (278)
T TIGR03056 73 --------------------RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDG-----PVTPRMVVGIN 127 (278)
T ss_pred --------------------ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhC-----CcccceEEEEc
Confidence 001235556666777776544 3348999999999999999854 44567777765
Q ss_pred CCCCCc-------------------------------cc-----------------------------------------
Q 007311 531 GFALHS-------------------------------AE----------------------------------------- 538 (608)
Q Consensus 531 G~~~~~-------------------------------~~----------------------------------------- 538 (608)
+..... ..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (278)
T TIGR03056 128 AALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQW 207 (278)
T ss_pred CcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcc
Confidence 432100 00
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl 604 (608)
.....+++|+|+++|+ +|..+|.+.++++.+.+++ ..++..+ +||.++.+.+ .++.|.+||
T Consensus 208 ~~~~~~~~~~~i~~P~lii~g~---~D~~vp~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 208 DLAPLNRDLPRITIPLHLIAGE---EDKAVPPDESKRAATRVPT--ATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred cccchhhhcccCCCCEEEEEeC---CCcccCHHHHHHHHHhccC--CeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 0123478999999999 8999999999999988876 4555554 5999876432 556666665
No 52
>PLN02578 hydrolase
Probab=99.44 E-value=3.9e-12 Score=135.94 Aligned_cols=59 Identities=17% Similarity=0.423 Sum_probs=47.9
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
..+++|+++|+|+ +|.++|.+.++++++.+++ ..++..++||.++.+.+ ..+.|.+||.
T Consensus 293 ~~i~~PvLiI~G~---~D~~v~~~~~~~l~~~~p~--a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 293 SKLSCPLLLLWGD---LDPWVGPAKAEKIKAFYPD--TTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred hcCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 4578999999999 8999999999999999876 45555589999877543 6677888875
No 53
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.43 E-value=4.6e-12 Score=129.79 Aligned_cols=173 Identities=19% Similarity=0.217 Sum_probs=110.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.||||||+|++...|......+...+..+++++.+|.| + +.+-+.+
T Consensus 31 ~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~--------G---------------------~G~S~~~---- 77 (282)
T TIGR03343 31 EAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSP--------G---------------------FNKSDAV---- 77 (282)
T ss_pred CeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCC--------C---------------------CCCCCCC----
Confidence 569999999999988864333343334457999999988 1 1100000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
. .++ ...+ ...+.+.++++..+ ....++||||||++|+.++.++ +..++++|++++
T Consensus 78 ------------~--~~~---~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~-----p~~v~~lvl~~~ 134 (282)
T TIGR03343 78 ------------V--MDE---QRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEY-----PDRIGKLILMGP 134 (282)
T ss_pred ------------c--Ccc---cccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhC-----hHhhceEEEECC
Confidence 0 000 0001 11334555555544 3458999999999999999854 345777777664
Q ss_pred CCC-------Cc-----------------------------c-------------------c------------------
Q 007311 532 FAL-------HS-----------------------------A-------------------E------------------ 538 (608)
Q Consensus 532 ~~~-------~~-----------------------------~-------------------~------------------ 538 (608)
... .. . .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (282)
T TIGR03343 135 GGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWD 214 (282)
T ss_pred CCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccch
Confidence 210 00 0 0
Q ss_pred --cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 539 --FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 539 --~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
.....+++|+|+++|+ +|+.++.+.++++++.+++. ..++..++||.++.+.+ ..+.|.+||.
T Consensus 215 ~~~~l~~i~~Pvlli~G~---~D~~v~~~~~~~~~~~~~~~-~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 215 VTARLGEIKAKTLVTWGR---DDRFVPLDHGLKLLWNMPDA-QLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHhhCCCCEEEEEcc---CCCcCCchhHHHHHHhCCCC-EEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 0123678999999999 89999999999999998863 33344467999877643 5577777775
No 54
>PRK10566 esterase; Provisional
Probab=99.43 E-value=2.9e-12 Score=129.33 Aligned_cols=185 Identities=17% Similarity=0.156 Sum_probs=110.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCc-cCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPH-ELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
...|.||++||++++...|. .+++.|. .++.++.+|.|. ..+ .. .........|+.
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~d~~g~G~~-----------~~------~~~~~~~~~~~~- 82 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYS----YFAVALAQAGFRVIMPDAPMHGAR-----------FS------GDEARRLNHFWQ- 82 (249)
T ss_pred CCCCEEEEeCCCCcccchHH----HHHHHHHhCCCEEEEecCCccccc-----------CC------CccccchhhHHH-
Confidence 34579999999999998888 5555554 479999999882 100 00 000000111111
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. .....+++.+.++++.+.-.......+|+||||||.+|+.++.+. ..++..+
T Consensus 83 ------------~---------~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~------~~~~~~~ 135 (249)
T PRK10566 83 ------------I---------LLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARH------PWVKCVA 135 (249)
T ss_pred ------------H---------HHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhC------CCeeEEE
Confidence 0 000012222333333221001124568999999999999988743 2344443
Q ss_pred Ee--cCCC--------CC-cc----------------c-----cccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHh
Q 007311 528 LC--SGFA--------LH-SA----------------E-----FEHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAF 574 (608)
Q Consensus 528 li--sG~~--------~~-~~----------------~-----~~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~ 574 (608)
.+ +++. +. .. . ....++ ++|+|++||+ +|.+||.+.++++.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~---~D~~v~~~~~~~l~~~l 212 (249)
T PRK10566 136 SLMGSGYFTSLARTLFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGL---ADDVVPAAESLRLQQAL 212 (249)
T ss_pred EeeCcHHHHHHHHHhcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcC---CCCcCCHHHHHHHHHHH
Confidence 32 2221 11 00 0 012344 6999999999 89999999999999988
Q ss_pred ccCC----cEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 575 EEGC----SVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 575 ~~~~----~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
.... ...+.+ +.||.+. +..++++.+||++.|
T Consensus 213 ~~~g~~~~~~~~~~~~~~H~~~--~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 213 RERGLDKNLTCLWEPGVRHRIT--PEALDAGVAFFRQHL 249 (249)
T ss_pred HhcCCCcceEEEecCCCCCccC--HHHHHHHHHHHHhhC
Confidence 7532 344444 4599874 578999999999865
No 55
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.42 E-value=3.9e-12 Score=116.81 Aligned_cols=143 Identities=23% Similarity=0.298 Sum_probs=100.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.||++||++.+...|. .+.+.|. .++.++.+|.|..-. ..
T Consensus 1 ~vv~~HG~~~~~~~~~----~~~~~l~~~G~~v~~~~~~~~~~-----------------------------~~------ 41 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ----PLAEALAEQGYAVVAFDYPGHGD-----------------------------SD------ 41 (145)
T ss_dssp EEEEECTTTTTTHHHH----HHHHHHHHTTEEEEEESCTTSTT-----------------------------SH------
T ss_pred CEEEECCCCCCHHHHH----HHHHHHHHCCCEEEEEecCCCCc-----------------------------cc------
Confidence 4899999999999998 5555554 479999998772211 00
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
....+.+.++.+.+... .....+++|||+||.+++.++.+ . .+++++|+++++
T Consensus 42 --------------------~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~-----~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 42 --------------------GADAVERVLADIRAGYP-DPDRIILIGHSMGGAIAANLAAR-----N-PRVKAVVLLSPY 94 (145)
T ss_dssp --------------------HSHHHHHHHHHHHHHHC-TCCEEEEEEETHHHHHHHHHHHH-----S-TTESEEEEESES
T ss_pred --------------------hhHHHHHHHHHHHhhcC-CCCcEEEEEEccCcHHHHHHhhh-----c-cceeEEEEecCc
Confidence 01123333443331111 33556899999999999999983 2 689999999995
Q ss_pred CCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCc
Q 007311 533 ALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHI 589 (608)
Q Consensus 533 ~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ 589 (608)
+. .......++|+++++|+ +|+.++.+..+++++.+... .++++.+ ++|.
T Consensus 95 ~~---~~~~~~~~~pv~~i~g~---~D~~~~~~~~~~~~~~~~~~-~~~~~i~g~~H~ 145 (145)
T PF12695_consen 95 PD---SEDLAKIRIPVLFIHGE---NDPLVPPEQVRRLYEALPGP-KELYIIPGAGHF 145 (145)
T ss_dssp SG---CHHHTTTTSEEEEEEET---T-SSSHHHHHHHHHHHHCSS-EEEEEETTS-TT
T ss_pred cc---hhhhhccCCcEEEEEEC---CCCcCCHHHHHHHHHHcCCC-cEEEEeCCCcCc
Confidence 32 23456888999999999 89999999999999999844 5655555 4774
No 56
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.41 E-value=4.7e-12 Score=133.67 Aligned_cols=106 Identities=20% Similarity=0.171 Sum_probs=75.7
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------c------------------------c----
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------A------------------------E---- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------~------------------------~---- 538 (608)
...|+|+||||++|+.++.. .+..++++|+++++.... . .
T Consensus 135 ~i~l~GhSmGG~ia~~~a~~-----~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (330)
T PLN02298 135 PRFLYGESMGGAICLLIHLA-----NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVK 209 (330)
T ss_pred CEEEEEecchhHHHHHHHhc-----CcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCccccccc
Confidence 35899999999999998874 345688999887642100 0 0
Q ss_pred -----------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE
Q 007311 539 -----------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE 583 (608)
Q Consensus 539 -----------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~ 583 (608)
.....+++|+|++||+ +|.++|.+.++++++.+.....+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~---~D~ivp~~~~~~l~~~i~~~~~~l~~ 286 (330)
T PLN02298 210 VPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGS---ADVVTDPDVSRALYEEAKSEDKTIKI 286 (330)
T ss_pred CHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecC---CCCCCCHHHHHHHHHHhccCCceEEE
Confidence 0123578999999999 89999999999999887643366666
Q ss_pred eCC-CCcCCCChh------hHHHHHHHHHHh
Q 007311 584 HDC-GHIIPTRSP------YIDEIKSFLQRF 607 (608)
Q Consensus 584 ~~g-GH~ip~~~~------~~~~i~~Fl~~~ 607 (608)
+++ ||.+....+ ..+.+.+||.+.
T Consensus 287 ~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 287 YDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred cCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 664 899754322 356677787664
No 57
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=99.41 E-value=4.4e-13 Score=115.08 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=62.3
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCcc--HHHHHHHHHhcCCCCC
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIR--CEMASAYVRSKGAGFE 234 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR--~~~a~~~L~~~~~Gf~ 234 (608)
++++|||||++.||..|||+| +++.+...+.. ..... ...++++||+||.+|.| +..|+..|++. ||+
T Consensus 9 ~~~~liDvR~~~e~~~~hi~g----a~~ip~~~~~~--~~~~~--~~~~~~~ivl~c~~G~~~~s~~aa~~L~~~--G~~ 78 (92)
T cd01532 9 EEIALIDVREEDPFAQSHPLW----AANLPLSRLEL--DAWVR--IPRRDTPIVVYGEGGGEDLAPRAARRLSEL--GYT 78 (92)
T ss_pred CCeEEEECCCHHHHhhCCccc----CeeCCHHHHHh--hhHhh--CCCCCCeEEEEeCCCCchHHHHHHHHHHHc--Ccc
Confidence 568999999999999999998 55544221110 01111 11358899999999998 58899999987 999
Q ss_pred cEEEcCccHHHHH
Q 007311 235 NVFQLYGGIQRYL 247 (608)
Q Consensus 235 nV~~L~GGi~~w~ 247 (608)
+|+.|+||+.+|.
T Consensus 79 ~v~~l~GG~~~W~ 91 (92)
T cd01532 79 DVALLEGGLQGWR 91 (92)
T ss_pred CEEEccCCHHHHc
Confidence 9999999999996
No 58
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.40 E-value=1.1e-11 Score=128.59 Aligned_cols=171 Identities=16% Similarity=0.127 Sum_probs=112.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.|||+||++++...|. .+.+.|...++++.+|.| ... . +..+.
T Consensus 27 g~~vvllHG~~~~~~~w~----~~~~~L~~~~~via~D~~--------G~G------~-------S~~~~---------- 71 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWR----NIIPHLAGLGRCLAPDLI--------GMG------A-------SDKPD---------- 71 (295)
T ss_pred CCEEEEECCCCCCHHHHH----HHHHHHhhCCEEEEEcCC--------CCC------C-------CCCCC----------
Confidence 357999999999999999 666666656799999988 100 0 00000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++...+.+..+++..+ ....|+|||+||.+|+.++.++ +..++++|+++
T Consensus 72 ---------------------~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lil~~ 125 (295)
T PRK03592 72 ---------------------IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARH-----PDRVRGIAFME 125 (295)
T ss_pred ---------------------CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhC-----hhheeEEEEEC
Confidence 00134455566666666654 4558999999999999999954 45688888877
Q ss_pred CCCCC------cc---------------c---------------------------------------------------
Q 007311 531 GFALH------SA---------------E--------------------------------------------------- 538 (608)
Q Consensus 531 G~~~~------~~---------------~--------------------------------------------------- 538 (608)
+...+ .. .
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (295)
T PRK03592 126 AIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELP 205 (295)
T ss_pred CCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcC
Confidence 52110 00 0
Q ss_pred ----------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHH-HHhccCCcEEEEeCCCCcCCCChh--hHHH
Q 007311 539 ----------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELA-KAFEEGCSVIIEHDCGHIIPTRSP--YIDE 599 (608)
Q Consensus 539 ----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~-~~~~~~~~~vv~~~gGH~ip~~~~--~~~~ 599 (608)
.....+++|+|+|+|+ +|.+++.....++. +..++. ...+..++||.+..+.+ ..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~v~~~ 281 (295)
T PRK03592 206 IDGEPADVVALVEEYAQWLATSDVPKLLINAE---PGAILTTGAIRDWCRSWPNQL-EITVFGAGLHFAQEDSPEEIGAA 281 (295)
T ss_pred CCCcchhhHhhhhHhHHHhccCCCCeEEEecc---CCcccCcHHHHHHHHHhhhhc-ceeeccCcchhhhhcCHHHHHHH
Confidence 0012368999999999 89999555554544 455542 33333478999876533 5688
Q ss_pred HHHHHHHh
Q 007311 600 IKSFLQRF 607 (608)
Q Consensus 600 i~~Fl~~~ 607 (608)
|.+||++.
T Consensus 282 i~~fl~~~ 289 (295)
T PRK03592 282 IAAWLRRL 289 (295)
T ss_pred HHHHHHHh
Confidence 88898763
No 59
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.40 E-value=8.3e-12 Score=133.79 Aligned_cols=171 Identities=13% Similarity=0.104 Sum_probs=110.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.||||||++++...|. .+...|.+.++++.+|.| +. ..-+.+.
T Consensus 88 gp~lvllHG~~~~~~~w~----~~~~~L~~~~~via~Dl~--------G~---------------------G~S~~~~-- 132 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWR----RNIGVLAKNYTVYAIDLL--------GF---------------------GASDKPP-- 132 (360)
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEECCC--------CC---------------------CCCCCCC--
Confidence 467999999999999999 555566667999999988 11 0000000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+ ....++...+.+.++++..+ ....|+|||+||.+|+.++... .+..++++|+++
T Consensus 133 ----------~----------~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----~P~rV~~LVLi~ 188 (360)
T PLN02679 133 ----------G----------FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASES----TRDLVRGLVLLN 188 (360)
T ss_pred ----------C----------ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhc----ChhhcCEEEEEC
Confidence 0 01134455556666666543 3457999999999999888632 134577777766
Q ss_pred CCCCC-----------------------------------c-----------------c----c----------------
Q 007311 531 GFALH-----------------------------------S-----------------A----E---------------- 538 (608)
Q Consensus 531 G~~~~-----------------------------------~-----------------~----~---------------- 538 (608)
+.... . . .
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T PLN02679 189 CAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGA 268 (360)
T ss_pred CccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCCh
Confidence 32100 0 0 0
Q ss_pred -----------------cccCCCCCCEEEEEcCCCCCCcccchHH-----HHHHHHHhccCCcEEEEe-CCCCcCCCChh
Q 007311 539 -----------------FEHRSINCPSLHIFGGDLGNDRQVANQA-----SKELAKAFEEGCSVIIEH-DCGHIIPTRSP 595 (608)
Q Consensus 539 -----------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-----~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~ 595 (608)
.....+++|+|+|+|+ +|+.+|.+. .+++.+.+++ .++++. ++||.++.+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~---~D~~~p~~~~~~~~~~~l~~~ip~--~~l~~i~~aGH~~~~E~P 343 (360)
T PLN02679 269 LDAFVSIVTGPPGPNPIKLIPRISLPILVLWGD---QDPFTPLDGPVGKYFSSLPSQLPN--VTLYVLEGVGHCPHDDRP 343 (360)
T ss_pred HHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeC---CCCCcCchhhHHHHHHhhhccCCc--eEEEEcCCCCCCccccCH
Confidence 0123578999999999 899998763 2345555555 455444 56999877544
Q ss_pred --hHHHHHHHHHH
Q 007311 596 --YIDEIKSFLQR 606 (608)
Q Consensus 596 --~~~~i~~Fl~~ 606 (608)
+.+.|.+||.+
T Consensus 344 e~~~~~I~~FL~~ 356 (360)
T PLN02679 344 DLVHEKLLPWLAQ 356 (360)
T ss_pred HHHHHHHHHHHHh
Confidence 66888888875
No 60
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=1.2e-11 Score=128.89 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=115.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++|||+||++++...|. .+.+.|. .+++++.+|.| ... ...+.+
T Consensus 46 ~~~lvliHG~~~~~~~w~----~~~~~L~~~gy~vi~~Dl~--------G~G------------------~S~~~~---- 91 (302)
T PRK00870 46 GPPVLLLHGEPSWSYLYR----KMIPILAAAGHRVIAPDLI--------GFG------------------RSDKPT---- 91 (302)
T ss_pred CCEEEEECCCCCchhhHH----HHHHHHHhCCCEEEEECCC--------CCC------------------CCCCCC----
Confidence 468999999999999999 5556664 46999999988 110 000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. ....++++..+.+.++++..+ ....|+|||+||.+|+.+|... +..++++|++
T Consensus 92 ----------------~----~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~ 146 (302)
T PRK00870 92 ----------------R----REDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEH-----PDRFARLVVA 146 (302)
T ss_pred ----------------C----cccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhC-----hhheeEEEEe
Confidence 0 001235666677777777654 4457999999999999999854 4457777777
Q ss_pred cCCCCCc-----------------------------------c-c-----------------------------------
Q 007311 530 SGFALHS-----------------------------------A-E----------------------------------- 538 (608)
Q Consensus 530 sG~~~~~-----------------------------------~-~----------------------------------- 538 (608)
++..+.. . +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T PRK00870 147 NTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVA 226 (302)
T ss_pred CCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchH
Confidence 6432100 0 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC-c-EEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC-S-VIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~-~-~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.....+++|+++|||+ +|+++|... +++.+.+++.. . .++..++||.++.+.+ ..+.|.+||.+
T Consensus 227 ~~~~~~~~l~~i~~P~lii~G~---~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~ 300 (302)
T PRK00870 227 ANRAAWAVLERWDKPFLTAFSD---SDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRA 300 (302)
T ss_pred HHHHHHHhhhcCCCceEEEecC---CCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhc
Confidence 0013578999999999 899999766 88888887632 2 2344467999776533 56777888764
No 61
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.38 E-value=1.9e-11 Score=122.32 Aligned_cols=98 Identities=19% Similarity=0.177 Sum_probs=70.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++|||+||++++...|. .+.+.|. .++++.+|.| +..+ .. +
T Consensus 2 ~p~vvllHG~~~~~~~w~----~~~~~l~-~~~vi~~D~~G~G~S---------------------------~~---~-- 44 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ----PVGEALP-DYPRLYIDLPGHGGS---------------------------AA---I-- 44 (242)
T ss_pred CCEEEEECCCCCChHHHH----HHHHHcC-CCCEEEecCCCCCCC---------------------------CC---c--
Confidence 357999999999999999 6666675 5999999988 1000 00 0
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
....+++..+.+.++++..+ ....++||||||.+|+.++.+.+ +..++++|++
T Consensus 45 ----------------------~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~----~~~v~~lvl~ 98 (242)
T PRK11126 45 ----------------------SVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGL----AGGLCGLIVE 98 (242)
T ss_pred ----------------------cccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCC----cccccEEEEe
Confidence 01146667777888887755 34579999999999999999542 2238888887
Q ss_pred cCC
Q 007311 530 SGF 532 (608)
Q Consensus 530 sG~ 532 (608)
++.
T Consensus 99 ~~~ 101 (242)
T PRK11126 99 GGN 101 (242)
T ss_pred CCC
Confidence 654
No 62
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=99.38 E-value=7.6e-13 Score=115.62 Aligned_cols=80 Identities=18% Similarity=0.292 Sum_probs=64.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+..+||||++.||..|||+| +++.+. .++.+++.. ...+++++|++||.+|.||..++..|++. ||++|
T Consensus 17 ~~~~lIDvR~~~ef~~ghIpg----Ainip~---~~l~~~l~~-~~~~~~~~vvlyC~~G~rS~~aa~~L~~~--G~~~v 86 (101)
T TIGR02981 17 AAEHWIDVRIPEQYQQEHIQG----AINIPL---KEIKEHIAT-AVPDKNDTVKLYCNAGRQSGMAKDILLDM--GYTHA 86 (101)
T ss_pred cCCEEEECCCHHHHhcCCCCC----CEECCH---HHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHc--CCCeE
Confidence 467899999999999999999 555542 234444433 22357889999999999999999999997 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.+ ||+.+|.
T Consensus 87 ~~~-GG~~~~~ 96 (101)
T TIGR02981 87 ENA-GGIKDIA 96 (101)
T ss_pred Eec-CCHHHhh
Confidence 986 9999996
No 63
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=99.37 E-value=1.3e-12 Score=141.12 Aligned_cols=102 Identities=25% Similarity=0.398 Sum_probs=82.6
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGK 207 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k 207 (608)
....++++|+.++++++ .+++|||||++.||+.|||+| +++.+...+.. ...+ .+.++++
T Consensus 285 ~~~~Is~~el~~~l~~~------------~~~~lIDvR~~~ef~~ghIpG----Ainip~~~l~~-~~~~---~~l~~d~ 344 (392)
T PRK07878 285 AGSTITPRELKEWLDSG------------KKIALIDVREPVEWDIVHIPG----AQLIPKSEILS-GEAL---AKLPQDR 344 (392)
T ss_pred CCCccCHHHHHHHHhCC------------CCeEEEECCCHHHHhcCCCCC----CEEcChHHhcc-hhHH---hhCCCCC
Confidence 35789999999999763 468999999999999999999 55544322221 1112 2346889
Q ss_pred eEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCC
Q 007311 208 HVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 208 ~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
+||+||.+|.|+..|+.+|++. ||+||+.|+||+.+|..++.
T Consensus 345 ~iVvyC~~G~rS~~aa~~L~~~--G~~~V~~L~GG~~~W~~~~~ 386 (392)
T PRK07878 345 TIVLYCKTGVRSAEALAALKKA--GFSDAVHLQGGVVAWAKQVD 386 (392)
T ss_pred cEEEEcCCChHHHHHHHHHHHc--CCCcEEEecCcHHHHHHhcC
Confidence 9999999999999999999997 99999999999999998764
No 64
>PRK11071 esterase YqiA; Provisional
Probab=99.37 E-value=1.4e-11 Score=120.16 Aligned_cols=155 Identities=16% Similarity=0.180 Sum_probs=105.4
Q ss_pred cEEEEecCCCCChHHHHHH-HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGR-TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~-~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
++||+||||+++...|..+ +..+.......++++.+|.| .|.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~-------------------------------g~~------ 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP-------------------------------PYP------ 44 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC-------------------------------CCH------
Confidence 4699999999999999853 33333333346888888876 110
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
++..+.+.++++..+ ....|+|+||||.+|+.+|.+.+ .+ +|+++
T Consensus 45 --------------------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~-------~~-~vl~~ 90 (190)
T PRK11071 45 --------------------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFM-------LP-AVVVN 90 (190)
T ss_pred --------------------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcC-------CC-EEEEC
Confidence 123445556665543 34589999999999999998542 23 46666
Q ss_pred CCCCCcc---------------c--------------c--ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc
Q 007311 531 GFALHSA---------------E--------------F--EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS 579 (608)
Q Consensus 531 G~~~~~~---------------~--------------~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~ 579 (608)
+...+.. + . .....+.|++++||+ +|.+||.+.+.++++.+ .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~v~iihg~---~De~V~~~~a~~~~~~~----~ 163 (190)
T PRK11071 91 PAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPDLIWLLQQT---GDEVLDYRQAVAYYAAC----R 163 (190)
T ss_pred CCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChhhEEEEEeC---CCCcCCHHHHHHHHHhc----c
Confidence 5443200 0 0 112366788999999 89999999999998843 3
Q ss_pred EEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 580 VIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 580 ~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.++..+++|.+...+...+.+.+|+.
T Consensus 164 ~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 164 QTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred eEEECCCCcchhhHHHhHHHHHHHhc
Confidence 33445679999665668888998875
No 65
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=99.36 E-value=1.6e-12 Score=109.56 Aligned_cols=81 Identities=27% Similarity=0.425 Sum_probs=64.9
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
++++|||+|+..||+.|||++ +++.+.. ++.... ......++++||+||..|.|+..++..|++. ||.+|
T Consensus 9 ~~~~iiD~R~~~~~~~~~i~g----a~~~~~~---~~~~~~-~~~~~~~~~~vv~~c~~~~~a~~~~~~l~~~--G~~~v 78 (89)
T cd00158 9 EDAVLLDVREPEEYAAGHIPG----AINIPLS---ELEERA-ALLELDKDKPIVVYCRSGNRSARAAKLLRKA--GGTNV 78 (89)
T ss_pred CCeEEEECCCHHHHhccccCC----CEecchH---HHhhHH-HhhccCCCCeEEEEeCCCchHHHHHHHHHHh--CcccE
Confidence 578999999999999999999 4444321 111110 1234568999999999999999999999997 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
+.|.||+.+|.
T Consensus 79 ~~l~gG~~~w~ 89 (89)
T cd00158 79 YNLEGGMLAWK 89 (89)
T ss_pred EEecCChhhcC
Confidence 99999999994
No 66
>PRK07411 hypothetical protein; Validated
Probab=99.35 E-value=1.8e-12 Score=139.94 Aligned_cols=105 Identities=22% Similarity=0.370 Sum_probs=80.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...|+++|+.++++++ .++++|||||++.||+.|||+| +++.+...+.+-. .+++..+.+++++
T Consensus 281 ~~~Is~~el~~~l~~~-----------~~~~vlIDVR~~~E~~~ghIpG----AiniP~~~l~~~~-~~~~l~~l~~d~~ 344 (390)
T PRK07411 281 IPEMTVTELKALLDSG-----------ADDFVLIDVRNPNEYEIARIPG----SVLVPLPDIENGP-GVEKVKELLNGHR 344 (390)
T ss_pred cCccCHHHHHHHHhCC-----------CCCeEEEECCCHHHhccCcCCC----CEEccHHHhhccc-chHHHhhcCCCCe
Confidence 4679999999999752 1368999999999999999999 5554433222110 0112233468999
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
||+||.+|.||..|+.+|++. ||++ ++|.||+.+|.+++..
T Consensus 345 IVvyC~~G~RS~~aa~~L~~~--G~~~-~~l~GG~~~W~~~~~p 385 (390)
T PRK07411 345 LIAHCKMGGRSAKALGILKEA--GIEG-TNVKGGITAWSREVDP 385 (390)
T ss_pred EEEECCCCHHHHHHHHHHHHc--CCCe-EEecchHHHHHHhcCC
Confidence 999999999999999999987 9974 6899999999987643
No 67
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.35 E-value=1.1e-11 Score=120.12 Aligned_cols=162 Identities=20% Similarity=0.247 Sum_probs=115.3
Q ss_pred EEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCCcc
Q 007311 375 ILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSGKR 454 (608)
Q Consensus 375 iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 454 (608)
|||+||++.+...|. .+.+.|.++++++.+|.|- .. . ..+ .
T Consensus 1 vv~~hG~~~~~~~~~----~~~~~l~~~~~v~~~d~~G--------~G------~------------s~~-~-------- 41 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD----PLAEALARGYRVIAFDLPG--------HG------R------------SDP-P-------- 41 (228)
T ss_dssp EEEE-STTTTGGGGH----HHHHHHHTTSEEEEEECTT--------ST------T------------SSS-H--------
T ss_pred eEEECCCCCCHHHHH----HHHHHHhCCCEEEEEecCC--------cc------c------------ccc-c--------
Confidence 799999999999999 5666666789999999881 00 0 000 0
Q ss_pred ccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 455 ETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 455 ~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+ .....+++.++.+.++++..+ ....|+|||+||.+++.++.+. +..++++|++++..
T Consensus 42 -------------~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----p~~v~~~vl~~~~~ 101 (228)
T PF12697_consen 42 -------------PD--YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARY-----PDRVKGLVLLSPPP 101 (228)
T ss_dssp -------------SS--GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESS
T ss_pred -------------cc--cCCcchhhhhhhhhhccccccccccccccccccccccccccccc-----ccccccceeecccc
Confidence 00 012345666777777777765 4558999999999999999854 44799999999887
Q ss_pred CCc-----c---c-------------------------------------------------------cccCCCCCCEEE
Q 007311 534 LHS-----A---E-------------------------------------------------------FEHRSINCPSLH 550 (608)
Q Consensus 534 ~~~-----~---~-------------------------------------------------------~~~~~i~~PvL~ 550 (608)
... . . .....+++|+++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~ 181 (228)
T PF12697_consen 102 PLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLV 181 (228)
T ss_dssp SHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEE
T ss_pred cccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCeEE
Confidence 421 0 0 012467999999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhhHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~~~~i~~ 602 (608)
++|+ +|.+++.+..+++.+.+++ ..++..+ +||.+.. +..+++.+
T Consensus 182 i~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~--~~p~~~~~ 227 (228)
T PF12697_consen 182 IHGE---DDPIVPPESAEELADKLPN--AELVVIPGAGHFLFL--EQPDEVAE 227 (228)
T ss_dssp EEET---TSSSSHHHHHHHHHHHSTT--EEEEEETTSSSTHHH--HSHHHHHH
T ss_pred eecC---CCCCCCHHHHHHHHHHCCC--CEEEEECCCCCccHH--HCHHHHhc
Confidence 9999 8999999999999988876 6666665 6999755 34444443
No 68
>PRK13604 luxD acyl transferase; Provisional
Probab=99.34 E-value=5.7e-11 Score=122.94 Aligned_cols=173 Identities=18% Similarity=0.198 Sum_probs=114.5
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
..+.++||+.||++.+...|. .+++.|. .++.++.+|.. .+. +. +. + .+.+
T Consensus 34 ~~~~~~vIi~HGf~~~~~~~~----~~A~~La~~G~~vLrfD~r--------g~~-----Ge-------S~-G--~~~~- 85 (307)
T PRK13604 34 PKKNNTILIASGFARRMDHFA----GLAEYLSSNGFHVIRYDSL--------HHV-----GL-------SS-G--TIDE- 85 (307)
T ss_pred CCCCCEEEEeCCCCCChHHHH----HHHHHHHHCCCEEEEecCC--------CCC-----CC-------CC-C--cccc-
Confidence 345578999999999987677 7777775 58999988854 100 00 00 0 0100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
. .++ ....++..+++|+++. .....+|+||||||++|+.+|. ..+++++|
T Consensus 86 -------------~--t~s-----~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~-------~~~v~~lI 135 (307)
T PRK13604 86 -------------F--TMS-----IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN-------EIDLSFLI 135 (307)
T ss_pred -------------C--ccc-----ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc-------CCCCCEEE
Confidence 0 000 0135677778888663 3345689999999999876665 33588999
Q ss_pred EecCCCCCc--------------------------------c-----------c------cccCCCCCCEEEEEcCCCCC
Q 007311 528 LCSGFALHS--------------------------------A-----------E------FEHRSINCPSLHIFGGDLGN 558 (608)
Q Consensus 528 lisG~~~~~--------------------------------~-----------~------~~~~~i~~PvL~i~G~~~~~ 558 (608)
+.+|+.... . . .....++.|+|+|||+ +
T Consensus 136 ~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~---~ 212 (307)
T PRK13604 136 TAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTAN---N 212 (307)
T ss_pred EcCCcccHHHHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcC---C
Confidence 999886610 0 0 1123578999999999 8
Q ss_pred CcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHH
Q 007311 559 DRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 559 D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
|.+||.+.++++++.+......++.+ +++|.+... .--+.+|.+
T Consensus 213 D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~---~~~~~~~~~ 257 (307)
T PRK13604 213 DSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN---LVVLRNFYQ 257 (307)
T ss_pred CCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc---hHHHHHHHH
Confidence 99999999999999987433555555 558998553 333445544
No 69
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=99.34 E-value=1.9e-12 Score=113.69 Aligned_cols=80 Identities=15% Similarity=0.260 Sum_probs=64.4
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+-+|||||++.||+.|||+| +++.+. .++..++.. ....++++||+||.+|.|+..++..|.+. ||++|
T Consensus 19 ~~~~lIDvR~~~ef~~ghIpG----AiniP~---~~l~~~l~~-l~~~~~~~IVlyC~~G~rS~~aa~~L~~~--G~~~v 88 (104)
T PRK10287 19 AAEHWIDVRVPEQYQQEHVQG----AINIPL---KEVKERIAT-AVPDKNDTVKLYCNAGRQSGQAKEILSEM--GYTHA 88 (104)
T ss_pred CCCEEEECCCHHHHhcCCCCc----cEECCH---HHHHHHHHh-cCCCCCCeEEEEeCCChHHHHHHHHHHHc--CCCeE
Confidence 355799999999999999998 565553 234444443 22356789999999999999999999987 99999
Q ss_pred EEcCccHHHHH
Q 007311 237 FQLYGGIQRYL 247 (608)
Q Consensus 237 ~~L~GGi~~w~ 247 (608)
++ .||+.+|.
T Consensus 89 ~~-~GG~~~~~ 98 (104)
T PRK10287 89 EN-AGGLKDIA 98 (104)
T ss_pred Ee-cCCHHHHh
Confidence 88 69999995
No 70
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=99.33 E-value=2.2e-12 Score=138.97 Aligned_cols=96 Identities=23% Similarity=0.345 Sum_probs=78.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
+.++++|+.+++++ +.++||||++.||+.|||+| +++.+. .++..++.. ....++++|
T Consensus 3 ~~is~~el~~~l~~--------------~~~ivDvR~~~e~~~ghIpg----Ai~ip~---~~l~~~~~~-~~~~~~~~I 60 (376)
T PRK08762 3 REISPAEARARAAQ--------------GAVLIDVREAHERASGQAEG----ALRIPR---GFLELRIET-HLPDRDREI 60 (376)
T ss_pred ceeCHHHHHHHHhC--------------CCEEEECCCHHHHhCCcCCC----CEECCH---HHHHHHHhh-hcCCCCCeE
Confidence 46899999999864 47999999999999999999 555542 233333332 112578999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
|+||.+|.|+..|+..|++. ||+||+.|+||+.+|.+.
T Consensus 61 vvyC~~G~rs~~aa~~L~~~--G~~~v~~l~GG~~~W~~~ 98 (376)
T PRK08762 61 VLICASGTRSAHAAATLREL--GYTRVASVAGGFSAWKDA 98 (376)
T ss_pred EEEcCCCcHHHHHHHHHHHc--CCCceEeecCcHHHHHhc
Confidence 99999999999999999987 999999999999999864
No 71
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.33 E-value=6.5e-11 Score=116.39 Aligned_cols=167 Identities=22% Similarity=0.276 Sum_probs=108.6
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|||+||++++...|. .+.+.|...++++.+|.|-. . . +. ...+
T Consensus 2 ~~vv~~hG~~~~~~~~~----~~~~~L~~~~~v~~~d~~g~--------G------~-------s~--~~~~-------- 46 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQ----ALIELLGPHFRCLAIDLPGH--------G------S-------SQ--SPDE-------- 46 (251)
T ss_pred CEEEEEcCCCCchhhHH----HHHHHhcccCeEEEEcCCCC--------C------C-------CC--CCCc--------
Confidence 57999999999999999 77777777799999997710 0 0 00 0000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHH-HHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAY-LKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~-L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++++.++. +..+++..+ ....|+|||+||.+|+.++.+. +..++++|+++
T Consensus 47 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~-----~~~v~~lil~~ 102 (251)
T TIGR03695 47 -------------------IERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQY-----PERVQGLILES 102 (251)
T ss_pred -------------------cChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhC-----chheeeeEEec
Confidence 012345666666 555555433 3447899999999999999854 34577888877
Q ss_pred CCCCCcc------------------------------------------c------------------------------
Q 007311 531 GFALHSA------------------------------------------E------------------------------ 538 (608)
Q Consensus 531 G~~~~~~------------------------------------------~------------------------------ 538 (608)
+.+.... .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (251)
T TIGR03695 103 GSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGK 182 (251)
T ss_pred CCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhc
Confidence 5432110 0
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl 604 (608)
.....+++|+++++|+ +|..++ +..+++.+.+.+ .+++..+ +||.+..+.+ ..+.|.+||
T Consensus 183 ~~~~~~~~~~~~~P~l~i~g~---~D~~~~-~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 183 QPSLWPKLQALTIPVLYLCGE---KDEKFV-QIAKEMQKLLPN--LTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred ccchHHHhhCCCCceEEEeeC---cchHHH-HHHHHHHhcCCC--CcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 0023578999999999 787764 566667776655 5555555 5998766433 344555554
No 72
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.33 E-value=5.4e-11 Score=131.15 Aligned_cols=175 Identities=16% Similarity=0.224 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHH-HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGR-TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~-~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||||||++.+...|..+ +..|.+.+...++++.+|.| +.. . + +.+.
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~--------G~G------~-------S--------~~p~ 250 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLL--------GFG------R-------S--------PKPA 250 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCC--------CCC------C-------C--------cCCC
Confidence 346799999999999999854 35666655568999999988 110 0 0 0000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHH-HHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLK-TIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~-~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
+ ....+++..+.+. .+++..+ ....|+||||||++|+.+|.+++ ..++++|
T Consensus 251 ------------~----------~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~P-----e~V~~LV 303 (481)
T PLN03087 251 ------------D----------SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHP-----GAVKSLT 303 (481)
T ss_pred ------------C----------CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhCh-----HhccEEE
Confidence 0 0113444445553 4555443 44579999999999999998653 4567777
Q ss_pred EecCCCC---C--------------------c---------------------------cc---------------c---
Q 007311 528 LCSGFAL---H--------------------S---------------------------AE---------------F--- 539 (608)
Q Consensus 528 lisG~~~---~--------------------~---------------------------~~---------------~--- 539 (608)
++++..- . . .+ .
T Consensus 304 Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 383 (481)
T PLN03087 304 LLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGF 383 (481)
T ss_pred EECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHH
Confidence 7653210 0 0 00 0
Q ss_pred -------c----------------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEE-EeCCCCc
Q 007311 540 -------E----------------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVII-EHDCGHI 589 (608)
Q Consensus 540 -------~----------------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv-~~~gGH~ 589 (608)
. ...|++|+|++||+ +|.++|++.++.+++.+++ ..++ ..+.||.
T Consensus 384 ~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge---~D~ivP~~~~~~la~~iP~--a~l~vI~~aGH~ 458 (481)
T PLN03087 384 FCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGG---DDELIPVECSYAVKAKVPR--ARVKVIDDKDHI 458 (481)
T ss_pred HhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEEC---CCCCCCHHHHHHHHHhCCC--CEEEEeCCCCCc
Confidence 0 01478999999999 8999999999999999987 4444 4467998
Q ss_pred CCC--C-hhhHHHHHHHHHH
Q 007311 590 IPT--R-SPYIDEIKSFLQR 606 (608)
Q Consensus 590 ip~--~-~~~~~~i~~Fl~~ 606 (608)
.+. . ..+.+.|.+|+++
T Consensus 459 ~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 459 TIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred chhhcCHHHHHHHHHHHhhc
Confidence 653 2 3467788888753
No 73
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=99.33 E-value=2.7e-12 Score=137.36 Aligned_cols=99 Identities=19% Similarity=0.276 Sum_probs=72.7
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCe
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKH 208 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~ 208 (608)
...++++|+.+++++ .+.+|||||++.||+.|||++. ..+++.+...+.+....+.+..+. ++++
T Consensus 270 ~~~~~~~el~~~l~~-------------~~~~lIDVR~~~E~~~ghI~~~-~gAinIPl~~l~~~~~~~~~l~~~-~~~~ 334 (370)
T PRK05600 270 AARTDTTSLIDATLN-------------GSATLLDVREPHEVLLKDLPEG-GASLKLPLSAITDDADILHALSPI-DGDN 334 (370)
T ss_pred hcccCHHHHHHHHhc-------------CCeEEEECCCHHHhhhccCCCC-CccEeCcHHHhhcchhhhhhcccc-CCCc
Confidence 347899999999976 3578999999999999999841 015555533332211111221222 3349
Q ss_pred EEEEcCCCccHHHHHHHHHhcCCCCCc-EEEcCccHH
Q 007311 209 VLMYCTGGIRCEMASAYVRSKGAGFEN-VFQLYGGIQ 244 (608)
Q Consensus 209 Iv~yCtgGiR~~~a~~~L~~~~~Gf~n-V~~L~GGi~ 244 (608)
|++||.+|.||.+|+.+|++. ||++ ||+|+|||.
T Consensus 335 Ivv~C~sG~RS~~Aa~~L~~~--G~~~~v~~l~GG~~ 369 (370)
T PRK05600 335 VVVYCASGIRSADFIEKYSHL--GHELTLHNLPGGVN 369 (370)
T ss_pred EEEECCCChhHHHHHHHHHHc--CCCCceEEeccccC
Confidence 999999999999999999997 9996 999999985
No 74
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.32 E-value=7.1e-11 Score=121.75 Aligned_cols=159 Identities=16% Similarity=0.166 Sum_probs=107.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+++|||+||++.++..|. .+...|. .+++++.+|.|- +. . .+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~----~~~~~L~~~g~~vi~~dl~g--------~G---------------------~--s~ 60 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWY----KIRCLMENSGYKVTCIDLKS--------AG---------------------I--DQ 60 (273)
T ss_pred CCCCeEEEECCCCCCcCcHH----HHHHHHHhCCCEEEEecccC--------CC---------------------C--CC
Confidence 34568999999999999999 6666664 479999999881 00 0 00
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
. ++ ....++++..+.|.++++... ....|+||||||++++.++... +..++++
T Consensus 61 ~----------------~~----~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~-----p~~v~~l 115 (273)
T PLN02211 61 S----------------DA----DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRF-----PKKICLA 115 (273)
T ss_pred C----------------Cc----ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhC-----hhheeEE
Confidence 0 00 001245556667777776642 4557999999999999998744 3456666
Q ss_pred EEecCCCCC-----------------------------------cc-----c----------------------------
Q 007311 527 ILCSGFALH-----------------------------------SA-----E---------------------------- 538 (608)
Q Consensus 527 IlisG~~~~-----------------------------------~~-----~---------------------------- 538 (608)
|+++++.+. .. +
T Consensus 116 v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (273)
T PLN02211 116 VYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPIL 195 (273)
T ss_pred EEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcc
Confidence 666443210 00 0
Q ss_pred --c------ccCCC-CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 539 --F------EHRSI-NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 539 --~------~~~~i-~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
. ....+ ++|++.|+|+ +|..+|++..+++.+.+.. ..++..++||....+
T Consensus 196 ~~~~~~~~~~~~~~~~vP~l~I~g~---~D~~ip~~~~~~m~~~~~~--~~~~~l~~gH~p~ls 254 (273)
T PLN02211 196 ALRSARFEEETGDIDKVPRVYIKTL---HDHVVKPEQQEAMIKRWPP--SQVYELESDHSPFFS 254 (273)
T ss_pred ccccccccccccccCccceEEEEeC---CCCCCCHHHHHHHHHhCCc--cEEEEECCCCCcccc
Confidence 0 01123 6899999999 8999999999999998875 455666799986553
No 75
>PRK06489 hypothetical protein; Provisional
Probab=99.31 E-value=6.1e-11 Score=127.00 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=45.6
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHH--HHHHHHhccCCcEEEEe-CC----CCcCCCChh-hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQAS--KELAKAFEEGCSVIIEH-DC----GHIIPTRSP-YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~--~~l~~~~~~~~~~vv~~-~g----GH~ip~~~~-~~~~i~~Fl~~ 606 (608)
..|++|+|+|+|+ +|.++|.+.+ +++++.+++. ++++. ++ ||.+...++ +.+.|.+||.+
T Consensus 289 ~~I~~PvLvI~G~---~D~~~p~~~~~~~~la~~ip~a--~l~~i~~a~~~~GH~~~e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 289 EKIKAPVLAINSA---DDERNPPETGVMEAALKRVKHG--RLVLIPASPETRGHGTTGSAKFWKAYLAEFLAQ 356 (360)
T ss_pred HhCCCCEEEEecC---CCcccChhhHHHHHHHHhCcCC--eEEEECCCCCCCCcccccCHHHHHHHHHHHHHh
Confidence 4689999999999 8999998876 7889998873 44443 43 998764333 67788888865
No 76
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.30 E-value=5.2e-11 Score=118.37 Aligned_cols=125 Identities=19% Similarity=0.281 Sum_probs=99.6
Q ss_pred cccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-------------
Q 007311 472 QQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------- 538 (608)
Q Consensus 472 ~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------- 538 (608)
+..++++.++++|++.-. .....+|.|+|+|+..++.+|.+ .++.++|+.|++......
T Consensus 110 n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr-------~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~ 181 (258)
T KOG1552|consen 110 NLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASR-------YPLAAVVLHSPFTSGMRVAFPDTKTTYCFDA 181 (258)
T ss_pred cchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhc-------CCcceEEEeccchhhhhhhccCcceEEeecc
Confidence 346789999999888765 44566899999999999999883 238999999988754321
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc-CCCChhhHHHHHHHHHHh
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI-IPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~-ip~~~~~~~~i~~Fl~~~ 607 (608)
.....+++|+|++||+ +|.+|+...+.+|++.+++..--.+.+++||. +...+++++.+..|+...
T Consensus 182 f~~i~kI~~i~~PVLiiHgt---dDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 182 FPNIEKISKITCPVLIIHGT---DDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred ccccCcceeccCCEEEEecc---cCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 2356789999999999 99999999999999999986344566677875 666668999999998753
No 77
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=99.30 E-value=4.5e-12 Score=118.24 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=66.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcE
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENV 236 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV 236 (608)
.+++|||||...||+.|||+| +++.+ ..++...+.+ ..++++||+||.+|.++..++..|+.. ||++|
T Consensus 10 ~~~~ivDvR~~~e~~~gHIpg----Ai~~~---~~~l~~~l~~---l~~~~~vVv~c~~g~~a~~aa~~L~~~--G~~~v 77 (145)
T cd01535 10 GQTAVVDVTASANYVKRHIPG----AWWVL---RAQLAQALEK---LPAAERYVLTCGSSLLARFAAADLAAL--TVKPV 77 (145)
T ss_pred CCeEEEECCCHHHHHcCCCCC----ceeCC---HHHHHHHHHh---cCCCCCEEEEeCCChHHHHHHHHHHHc--CCcCe
Confidence 468999999999999999999 55443 1234433333 346789999999999999999999987 99999
Q ss_pred EEcCccHHHHHHh
Q 007311 237 FQLYGGIQRYLEQ 249 (608)
Q Consensus 237 ~~L~GGi~~w~~~ 249 (608)
+.|.||+.+|..+
T Consensus 78 ~~L~GG~~aW~~~ 90 (145)
T cd01535 78 FVLEGGTAAWIAA 90 (145)
T ss_pred EEecCcHHHHHHC
Confidence 9999999999975
No 78
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.30 E-value=6.4e-11 Score=126.46 Aligned_cols=165 Identities=19% Similarity=0.230 Sum_probs=109.9
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
+++|||+||++++...|. .+...|...++++.+|.|- .. .... .
T Consensus 131 ~~~vl~~HG~~~~~~~~~----~~~~~l~~~~~v~~~d~~g--------~G------------------~s~~-~----- 174 (371)
T PRK14875 131 GTPVVLIHGFGGDLNNWL----FNHAALAAGRPVIALDLPG--------HG------------------ASSK-A----- 174 (371)
T ss_pred CCeEEEECCCCCccchHH----HHHHHHhcCCEEEEEcCCC--------CC------------------CCCC-C-----
Confidence 467999999999999999 6666666669999999881 10 0000 0
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
....++....+.+.+++...+ ....|+|||+||.+|+.+|.+. +..++++|+++
T Consensus 175 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----~~~v~~lv~~~ 229 (371)
T PRK14875 175 --------------------VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARA-----PQRVASLTLIA 229 (371)
T ss_pred --------------------CCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhC-----chheeEEEEEC
Confidence 001235566666777776665 3457999999999999998853 44688888887
Q ss_pred CCCCCc---------------------------------c-------------c------------------------cc
Q 007311 531 GFALHS---------------------------------A-------------E------------------------FE 540 (608)
Q Consensus 531 G~~~~~---------------------------------~-------------~------------------------~~ 540 (608)
+..... . . ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (371)
T PRK14875 230 PAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDR 309 (371)
T ss_pred cCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHH
Confidence 642100 0 0 01
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
...+++|+|+++|+ +|.++|.+.++.+. .. ..+...+ +||......+ ..+.|.+||+
T Consensus 310 l~~i~~Pvlii~g~---~D~~vp~~~~~~l~----~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 310 LASLAIPVLVIWGE---QDRIIPAAHAQGLP----DG-VAVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred HhcCCCCEEEEEEC---CCCccCHHHHhhcc----CC-CeEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 23678999999999 89999987766543 22 4555555 7998765432 3445555554
No 79
>PRK10749 lysophospholipase L2; Provisional
Probab=99.29 E-value=1.3e-10 Score=122.89 Aligned_cols=177 Identities=17% Similarity=0.133 Sum_probs=112.4
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++||++||++++...|. .++..| ..+++++.+|.| ++. . +.+.. . ....
T Consensus 54 ~~~vll~HG~~~~~~~y~----~~~~~l~~~g~~v~~~D~~--------G~G------~-S~~~~-~-~~~~-------- 104 (330)
T PRK10749 54 DRVVVICPGRIESYVKYA----ELAYDLFHLGYDVLIIDHR--------GQG------R-SGRLL-D-DPHR-------- 104 (330)
T ss_pred CcEEEEECCccchHHHHH----HHHHHHHHCCCeEEEEcCC--------CCC------C-CCCCC-C-CCCc--------
Confidence 457999999999998888 555444 357999999988 111 0 00000 0 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
....+++..++.+..+++.. .....++||||||++|+.++.+. +..+++
T Consensus 105 ---------------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----p~~v~~ 158 (330)
T PRK10749 105 ---------------------GHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH-----PGVFDA 158 (330)
T ss_pred ---------------------CccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----CCCcce
Confidence 00123444444444444432 23347999999999999998843 556788
Q ss_pred EEEecCCCCC---------------------------------------------ccc----------------------
Q 007311 526 AILCSGFALH---------------------------------------------SAE---------------------- 538 (608)
Q Consensus 526 vIlisG~~~~---------------------------------------------~~~---------------------- 538 (608)
+|++++.... ..+
T Consensus 159 lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (330)
T PRK10749 159 IALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTY 238 (330)
T ss_pred EEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcH
Confidence 8888764210 000
Q ss_pred --------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-----CcEEEEe-CCCCcCCCChh---
Q 007311 539 --------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-----CSVIIEH-DCGHIIPTRSP--- 595 (608)
Q Consensus 539 --------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-----~~~vv~~-~gGH~ip~~~~--- 595 (608)
.....+++|+|++||+ +|++++.+.++++++.++.. .++++.+ ++||.+..+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~---~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r 315 (330)
T PRK10749 239 HWVRESILAGEQVLAGAGDITTPLLLLQAE---EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMR 315 (330)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCEEEEEeC---CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHH
Confidence 0124688999999999 89999999999998887531 2355555 56998765332
Q ss_pred --hHHHHHHHHHH
Q 007311 596 --YIDEIKSFLQR 606 (608)
Q Consensus 596 --~~~~i~~Fl~~ 606 (608)
..++|.+||.+
T Consensus 316 ~~v~~~i~~fl~~ 328 (330)
T PRK10749 316 SVALNAIVDFFNR 328 (330)
T ss_pred HHHHHHHHHHHhh
Confidence 55677888765
No 80
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.29 E-value=1e-10 Score=121.16 Aligned_cols=168 Identities=15% Similarity=0.129 Sum_probs=108.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++||||||++.+...|. .+...|...++++.+|.| +..+ ..+.
T Consensus 34 ~~~iv~lHG~~~~~~~~~----~~~~~l~~~~~vi~~D~~G~G~S----------------------~~~~--------- 78 (286)
T PRK03204 34 GPPILLCHGNPTWSFLYR----DIIVALRDRFRCVAPDYLGFGLS----------------------ERPS--------- 78 (286)
T ss_pred CCEEEEECCCCccHHHHH----HHHHHHhCCcEEEEECCCCCCCC----------------------CCCC---------
Confidence 467999999999999998 666667767999999988 1100 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+ ....++...+.+..+++..+ ....|+|||+||++|+.++... +..++++|++
T Consensus 79 ------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~-----p~~v~~lvl~ 132 (286)
T PRK03204 79 ------------------G---FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVER-----ADRVRGVVLG 132 (286)
T ss_pred ------------------c---cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhC-----hhheeEEEEE
Confidence 0 00123444555555555544 3458999999999999999854 4567777776
Q ss_pred cCCC-CC-c---------------c----------c---------------------------------c---cc-----
Q 007311 530 SGFA-LH-S---------------A----------E---------------------------------F---EH----- 541 (608)
Q Consensus 530 sG~~-~~-~---------------~----------~---------------------------------~---~~----- 541 (608)
++.. +. . . . . ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T PRK03204 133 NTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARP 212 (286)
T ss_pred CccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhH
Confidence 5432 00 0 0 0 0 00
Q ss_pred --C---------CCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHH
Q 007311 542 --R---------SINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 542 --~---------~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl 604 (608)
. .+++|+|+|+|+ +|..+++. .++++++.+++. ..++..++||.++.+.+ ..+.|.+||
T Consensus 213 ~~~~~~~~~~~~~~~~PtliI~G~---~D~~~~~~~~~~~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 213 LLARLAREVPATLGTKPTLLVWGM---KDVAFRPKTILPRLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHHhhhhhhhhcCCCCeEEEecC---CCcccCcHHHHHHHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 0 127999999999 89988554 578888888873 33444568999877533 344555554
No 81
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.29 E-value=1.2e-10 Score=126.30 Aligned_cols=181 Identities=15% Similarity=0.129 Sum_probs=113.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
.++.||++||++.+...|. .+++.|. .++.++.+|.+ .+. . +... ..+..
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~----~~a~~L~~~Gy~V~~~D~r--------GhG------~-------S~~~-~~~~~--- 185 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYL----HFAKQLTSCGFGVYAMDWI--------GHG------G-------SDGL-HGYVP--- 185 (395)
T ss_pred CceEEEEECCchHHHHHHH----HHHHHHHHCCCEEEEeCCC--------CCC------C-------CCCC-CCCCc---
Confidence 4568999999999988888 6666664 57999999987 110 0 0000 00000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.+....+++.+.++++.... .+....|+||||||.+|+.++. .+ .....++++|+.
T Consensus 186 -------------------~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p--~~~~~v~glVL~ 241 (395)
T PLN02652 186 -------------------SLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YP--SIEDKLEGIVLT 241 (395)
T ss_pred -------------------CHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-cc--CcccccceEEEE
Confidence 00011223333333332211 1223589999999999997764 21 112468888888
Q ss_pred cCCCCCcc-----------------------------------c--------------------------------cccC
Q 007311 530 SGFALHSA-----------------------------------E--------------------------------FEHR 542 (608)
Q Consensus 530 sG~~~~~~-----------------------------------~--------------------------------~~~~ 542 (608)
|++..... . ....
T Consensus 242 sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~ 321 (395)
T PLN02652 242 SPALRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFK 321 (395)
T ss_pred CcccccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcc
Confidence 77531000 0 0124
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCC---hhhHHHHHHHHHHh
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTR---SPYIDEIKSFLQRF 607 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~---~~~~~~i~~Fl~~~ 607 (608)
.+++|+|++||+ +|.++|++.++++++.+.....++..+++ +|.+..+ .+.++.+.+||.+.
T Consensus 322 ~I~vPvLIi~G~---~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 322 SVTVPFMVLHGT---ADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 678999999999 89999999999998887654355666665 7986443 34788899999865
No 82
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.25 E-value=3.4e-10 Score=114.43 Aligned_cols=56 Identities=23% Similarity=0.455 Sum_probs=39.6
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl 604 (608)
.+++|+|+++|+ +|.+ +.+.++++.+.++. .+++.. ++||....+.+ +.+.|.+||
T Consensus 229 ~i~~P~lii~G~---~D~~-~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 229 EIKVPTLLTVGE---FDTM-TPEAAREMQELIAG--SRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred ccCCCEEEEecC---CCcc-CHHHHHHHHHhccC--CeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 578999999999 7874 66788888888776 444444 57998776432 444555554
No 83
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.25 E-value=3.3e-10 Score=123.22 Aligned_cols=63 Identities=19% Similarity=0.370 Sum_probs=44.3
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHHhC
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQRFL 608 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~~L 608 (608)
..+++|+++|+|+ +|.+.+ ..+.++.+........++..++||.+..+.+ +.+.|.+|++.||
T Consensus 322 ~~I~vP~liI~G~---~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 322 SEWKVPTTFIYGR---HDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred ccCCCCEEEEEeC---CCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 4578999999999 787665 5565666555433234445567999777644 6788898888775
No 84
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.24 E-value=3.9e-10 Score=121.58 Aligned_cols=171 Identities=15% Similarity=0.126 Sum_probs=113.5
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
++.||||||++++...|. .+...|.+.++++.+|.| |..+ +.+.
T Consensus 127 ~~~ivllHG~~~~~~~w~----~~~~~L~~~~~Via~DlpG~G~S------------------------------~~p~- 171 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYR----KVLPVLSKNYHAIAFDWLGFGFS------------------------------DKPQ- 171 (383)
T ss_pred CCeEEEECCCCCCHHHHH----HHHHHHhcCCEEEEECCCCCCCC------------------------------CCCc-
Confidence 467999999999999999 555566667999999988 1110 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.. ......++...+.|.+++++.+ ....|+|+|+||++|+.++..+ +..++++|++
T Consensus 172 ---------------~~---~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~-----P~~v~~lILi 228 (383)
T PLN03084 172 ---------------PG---YGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAH-----PDKIKKLILL 228 (383)
T ss_pred ---------------cc---ccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhC-----hHhhcEEEEE
Confidence 00 0001246666777777777654 3457999999999999999854 3456777776
Q ss_pred cCCCCCc----------------------------------------cc----------------------------cc-
Q 007311 530 SGFALHS----------------------------------------AE----------------------------FE- 540 (608)
Q Consensus 530 sG~~~~~----------------------------------------~~----------------------------~~- 540 (608)
++..+.. .+ ..
T Consensus 229 ~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l 308 (383)
T PLN03084 229 NPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKEL 308 (383)
T ss_pred CCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhccc
Confidence 6432100 00 00
Q ss_pred ------------cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHH
Q 007311 541 ------------HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQ 605 (608)
Q Consensus 541 ------------~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~ 605 (608)
...+++|+|+|+|+ +|.+++.+.++++.+.. +. ..++..++||.++.+.+ ..+.|.+||.
T Consensus 309 ~~~~~~l~~~l~~~~i~vPvLiI~G~---~D~~v~~~~~~~~a~~~-~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 309 KKYIEEMRSILTDKNWKTPITVCWGL---RDRWLNYDGVEDFCKSS-QH-KLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred chhhHHHHhhhccccCCCCEEEEeeC---CCCCcCHHHHHHHHHhc-CC-eEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 02368999999999 89999999888888874 31 33444467999877543 4566666664
No 85
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=99.24 E-value=1.5e-11 Score=131.15 Aligned_cols=94 Identities=20% Similarity=0.370 Sum_probs=72.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeE
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHV 209 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~I 209 (608)
..++++++.++. .+.+|||||++.||+.|||+| +++.+...+.. .... ...+++++|
T Consensus 261 ~~i~~~~~~~~~---------------~~~~IIDVR~~~ef~~ghIpg----Ainip~~~l~~---~~~~-~~~~~~~~I 317 (355)
T PRK05597 261 EVLDVPRVSALP---------------DGVTLIDVREPSEFAAYSIPG----AHNVPLSAIRE---GANP-PSVSAGDEV 317 (355)
T ss_pred cccCHHHHHhcc---------------CCCEEEECCCHHHHccCcCCC----CEEeCHHHhhh---cccc-ccCCCCCeE
Confidence 467888887443 357999999999999999999 55544222111 0000 123578999
Q ss_pred EEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 210 LMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 210 v~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
++||.+|.|+.+|+..|++. ||+||+.|+||+.+|.+
T Consensus 318 vvyC~~G~rS~~Aa~~L~~~--G~~nV~~L~GGi~~W~~ 354 (355)
T PRK05597 318 VVYCAAGVRSAQAVAILERA--GYTGMSSLDGGIEGWLD 354 (355)
T ss_pred EEEcCCCHHHHHHHHHHHHc--CCCCEEEecCcHHHHhh
Confidence 99999999999999999987 99999999999999975
No 86
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.23 E-value=1.7e-10 Score=114.34 Aligned_cols=159 Identities=17% Similarity=0.147 Sum_probs=98.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.|.||+|||++++...+.... .|.+.+. .++.+++||.+-... ......|+...
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~-~~~~~a~~~g~~Vv~Pd~~g~~~----------------------~~~~~~~~~~~ 67 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDW-GWKAAADRYGFVLVAPEQTSYNS----------------------SNNCWDWFFTH 67 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhc-ChHHHHHhCCeEEEecCCcCccc----------------------cCCCCCCCCcc
Confidence 34688999999999998775221 1333332 468899888772110 00122444311
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. ... ......++.+.++++.+..........|+||||||.+|+.++.+. +..+++++.
T Consensus 68 ~-------------~~~----~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~-----p~~~~~~~~ 125 (212)
T TIGR01840 68 H-------------RAR----GTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTY-----PDVFAGGAS 125 (212)
T ss_pred c-------------cCC----CCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhC-----chhheEEEe
Confidence 0 000 001233455555555543222223557999999999999999853 456889999
Q ss_pred ecCCCCCccc--------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 529 CSGFALHSAE--------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 529 isG~~~~~~~--------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
+||....... ........|++++||. +|.+||++.++++.+.+..
T Consensus 126 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~---~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 126 NAGLPYGEASSSISATPQMCTAATAASVCRLVRGMQSEYNGPTPIMSVVHGD---ADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred ecCCcccccccchhhHhhcCCCCCHHHHHHHHhccCCcccCCCCeEEEEEcC---CCceeCcchHHHHHHHHHH
Confidence 9987642110 0011233446799999 8999999999999988875
No 87
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.23 E-value=2.7e-10 Score=122.96 Aligned_cols=62 Identities=19% Similarity=0.152 Sum_probs=48.8
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEE-Ee-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVII-EH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv-~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
..|++|+|+|+|+ +|.++|++.++++++.+.+.. ..++ .. +.||..+...+ +.+.|.+||++
T Consensus 306 ~~I~~PtLvI~G~---~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 306 ARIKARFLVVSFT---SDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred hcCCCCEEEEEEC---CccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 3678999999999 899999999999999998742 1333 43 68999766543 67888888875
No 88
>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase. This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.
Probab=99.23 E-value=4.9e-11 Score=109.29 Aligned_cols=110 Identities=18% Similarity=0.249 Sum_probs=74.9
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCccc-ccC--C------CchH-HHHhhh
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEI-RQF--S------DLPT-WIDNNA 201 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~-~~~--~------~~~~-~~~~~~ 201 (608)
|+|++++++|++. +++++|||||...||+.|||+++....+.... +.. . .++. ...+.+
T Consensus 2 is~~~l~~~l~~~-----------~~~~~iiDvR~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 70 (132)
T cd01446 2 IDCAWLAALLREG-----------GERLLLLDCRPFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRL 70 (132)
T ss_pred cCHHHHHHHHhcC-----------CCCEEEEECCCHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHH
Confidence 7899999999752 24799999999999999999985432222100 000 0 0100 011111
Q ss_pred hhcCCCeEEEEcCCCcc---------HHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 202 EQLQGKHVLMYCTGGIR---------CEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 202 ~~~k~k~Iv~yCtgGiR---------~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
...++++||+||.+|.+ ...+..+|.....++.+|+.|+||+.+|.+.+|.
T Consensus 71 ~~~~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~~~p~ 130 (132)
T cd01446 71 RRGESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSSEFPE 130 (132)
T ss_pred hcCCCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHhhCcc
Confidence 22368899999998876 6677777776201678999999999999999875
No 89
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.21 E-value=1.1e-09 Score=113.11 Aligned_cols=199 Identities=14% Similarity=0.101 Sum_probs=118.1
Q ss_pred CccEEEEecCCCCChHHHHHH--HHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASSFKGR--TASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~--~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+.|+|++|||++++.+.|..+ +..++.. .++.+|+||++..-. +..+. ...-..+....|+...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~--~g~~Vv~Pd~~~~g~---------~~~~~---~~~w~~g~~~~~~~d~ 106 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAE--HGLALVAPDTSPRGT---------GIAGE---DDAWDFGKGAGFYVDA 106 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhh--cCcEEEEeCCCCCcC---------CCCCC---cccccccCCccccccC
Confidence 358999999999999988643 2334332 368999999752110 00000 0000000112333210
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
. .++. ...........+.|..++++. .....|+|+||||.+|+.++.+. +..++
T Consensus 107 ~---------------~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----p~~~~ 164 (275)
T TIGR02821 107 T---------------EEPW--SQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN-----PDRFK 164 (275)
T ss_pred C---------------cCcc--cccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC-----cccce
Confidence 0 0000 000111222234444445442 23457999999999999999854 55688
Q ss_pred EEEEecCCCCCccc---------------c-----------ccCCCCCCEEEEEcCCCCCCcccch-HHHHHHHHHhccC
Q 007311 525 FAILCSGFALHSAE---------------F-----------EHRSINCPSLHIFGGDLGNDRQVAN-QASKELAKAFEEG 577 (608)
Q Consensus 525 ~vIlisG~~~~~~~---------------~-----------~~~~i~~PvL~i~G~~~~~D~~Vp~-~~~~~l~~~~~~~ 577 (608)
+++++++...+... . .......|++++||+ +|+.++. ..+..+.+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~---~D~~v~~~~~~~~~~~~l~~~ 241 (275)
T TIGR02821 165 SVSAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGT---ADQFLDEQLRPDAFEQACRAA 241 (275)
T ss_pred EEEEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecC---CCcccCccccHHHHHHHHHHc
Confidence 99998887422100 0 011356789999999 8999998 5667777777643
Q ss_pred --CcEEEEeCC-CCcCCCChhhHHHHHHHHHHhC
Q 007311 578 --CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 578 --~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~L 608 (608)
..++..+++ +|.+..-...+.+.++|+.+.+
T Consensus 242 g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 242 GQALTLRRQAGYDHSYYFIASFIADHLRHHAERL 275 (275)
T ss_pred CCCeEEEEeCCCCccchhHHHhHHHHHHHHHhhC
Confidence 256666776 9999877788899999988764
No 90
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.21 E-value=3.1e-10 Score=119.85 Aligned_cols=176 Identities=21% Similarity=0.271 Sum_probs=113.8
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..++.||++||||+|...|..++..|.+.. +..+..+|-| ++. ...|.+.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~--~~~v~aiDl~--------G~g------------------~~s~~~~-- 105 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAK--GLRVLAIDLP--------GHG------------------YSSPLPR-- 105 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhcccccccc--ceEEEEEecC--------CCC------------------cCCCCCC--
Confidence 456779999999999999995544444332 3889999977 100 1122220
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE-
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI- 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI- 527 (608)
+.. -.+.+.+..+.+.+.+.. ....|+|||+||.+|+.+|..+ +..++.+|
T Consensus 106 ------------~~~----------y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~-----P~~V~~lv~ 158 (326)
T KOG1454|consen 106 ------------GPL----------YTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY-----PETVDSLVL 158 (326)
T ss_pred ------------CCc----------eehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC-----cccccceee
Confidence 001 123444555555555543 2257999999999999999965 44566666
Q ss_pred --EecCCCCCcc-c------------------------------------------------------------------
Q 007311 528 --LCSGFALHSA-E------------------------------------------------------------------ 538 (608)
Q Consensus 528 --lisG~~~~~~-~------------------------------------------------------------------ 538 (608)
+++....... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (326)
T KOG1454|consen 159 LDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHR 238 (326)
T ss_pred ecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhh
Confidence 2222111100 0
Q ss_pred ------------------cccCCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--h
Q 007311 539 ------------------FEHRSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--Y 596 (608)
Q Consensus 539 ------------------~~~~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~ 596 (608)
....++. +|+|++||+ +|+++|.+.++.+.+.+++ +++++- ++||....+.+ .
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~---~D~~~p~~~~~~~~~~~pn--~~~~~I~~~gH~~h~e~Pe~~ 313 (326)
T KOG1454|consen 239 DARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGD---KDQIVPLELAEELKKKLPN--AELVEIPGAGHLPHLERPEEV 313 (326)
T ss_pred hheeeEEEeccCccchHHHhhccccCCceEEEEcC---cCCccCHHHHHHHHhhCCC--ceEEEeCCCCcccccCCHHHH
Confidence 0123445 999999999 8999999999999998854 555444 58998766433 6
Q ss_pred HHHHHHHHHHh
Q 007311 597 IDEIKSFLQRF 607 (608)
Q Consensus 597 ~~~i~~Fl~~~ 607 (608)
+..|..|+++.
T Consensus 314 ~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 314 AALLRSFIARL 324 (326)
T ss_pred HHHHHHHHHHh
Confidence 77888888764
No 91
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.20 E-value=9.4e-10 Score=120.05 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=80.8
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc----------c----------------c--------
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS----------A----------------E-------- 538 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~----------~----------------~-------- 538 (608)
...+|+|||+||.+|+.+|... +..++++|++++..... + .
T Consensus 265 ~ri~l~G~S~GG~~Al~~A~~~-----p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l 339 (414)
T PRK05077 265 TRVAAFGFRFGANVAVRLAYLE-----PPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMHDASDEALRVEL 339 (414)
T ss_pred ccEEEEEEChHHHHHHHHHHhC-----CcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCCCCCChHHHHHHh
Confidence 4568999999999999999742 45789999988764210 0 0
Q ss_pred ---c------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 539 ---F------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 539 ---~------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
. ...++++|+|+|||+ +|+++|.+.++.+.+..++ .++++.++.|.+......++.+.+||++.|
T Consensus 340 ~~~sl~~~~~l~~~i~~PvLiI~G~---~D~ivP~~~a~~l~~~~~~--~~l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 340 NRYSLKVQGLLGRRCPTPMLSGYWK---NDPFSPEEDSRLIASSSAD--GKLLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred hhccchhhhhhccCCCCcEEEEecC---CCCCCCHHHHHHHHHhCCC--CeEEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 0 013588999999999 8999999999999888765 566666666666555568899999998765
No 92
>PRK11784 tRNA 2-selenouridine synthase; Provisional
Probab=99.19 E-value=4.5e-11 Score=126.45 Aligned_cols=97 Identities=20% Similarity=0.387 Sum_probs=72.0
Q ss_pred CHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCC---------------------
Q 007311 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS--------------------- 191 (608)
Q Consensus 133 sp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~--------------------- 191 (608)
...+|.+++. ++++|||||++.||..|||+|+ +|.|..+..
T Consensus 4 ~~~~~~~~~~--------------~~~~lIDVRsp~Ef~~ghIpgA----iniPl~~~~er~~vgt~Ykq~g~~~a~~lg 65 (345)
T PRK11784 4 DAQDFRALFL--------------NDTPLIDVRSPIEFAEGHIPGA----INLPLLNDEERAEVGTCYKQQGQFAAIALG 65 (345)
T ss_pred cHHHHHHHHh--------------CCCEEEECCCHHHHhcCCCCCe----eeCCCCChhHHHhhchhhcccCHHHHHHhh
Confidence 4678888764 3689999999999999999994 444432110
Q ss_pred ------CchHHHHhhhhh--cCCCeEEEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 192 ------DLPTWIDNNAEQ--LQGKHVLMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 192 ------~~~~~~~~~~~~--~k~k~Iv~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
+++..+.+.... .++++|++|| +||.||..++.+|+.. || +|+.|.||+.+|....
T Consensus 66 ~~lv~~~l~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~--G~-~v~~L~GG~~awr~~~ 130 (345)
T PRK11784 66 HALVAGNIAAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEA--GI-DVPRLEGGYKAYRRFV 130 (345)
T ss_pred hhhcchhHHHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHc--CC-CcEEEcCCHHHHHHhh
Confidence 122222221111 2789999999 6999999999999986 99 6999999999998653
No 93
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.19 E-value=3.9e-10 Score=120.35 Aligned_cols=59 Identities=25% Similarity=0.211 Sum_probs=43.8
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE---EEe-CCCCcCCCChh--hHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI---IEH-DCGHIIPTRSP--YIDEIKSFL 604 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v---v~~-~gGH~ip~~~~--~~~~i~~Fl 604 (608)
.|++|+|+|+|+ +|.++|.+.++++++.+++....+ ... +.||..+.+.+ +.+.|.+||
T Consensus 286 ~I~~P~Lvi~G~---~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 286 RIKAPFLVVSIT---SDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred hCCCCEEEEEeC---CccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 568999999999 899999999999999998753332 133 57999776432 445555555
No 94
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.18 E-value=4.4e-10 Score=140.73 Aligned_cols=179 Identities=20% Similarity=0.310 Sum_probs=115.3
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
.++.||||||++++...|. .+.+.|.+.++++.+|.| ++.+-..+..
T Consensus 1370 ~~~~vVllHG~~~s~~~w~----~~~~~L~~~~rVi~~Dl~-----------------------------G~G~S~~~~~ 1416 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWI----PIMKAISGSARCISIDLP-----------------------------GHGGSKIQNH 1416 (1655)
T ss_pred CCCeEEEECCCCCCHHHHH----HHHHHHhCCCEEEEEcCC-----------------------------CCCCCCCccc
Confidence 3468999999999999999 556666667999999987 1111000000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
. .+ +. ......++...+.|.++++..+ ....|+||||||++|+.++.++ +..++++|++
T Consensus 1417 ~-----~~-------~~---~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~-----P~~V~~lVli 1476 (1655)
T PLN02980 1417 A-----KE-------TQ---TEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRF-----SDKIEGAVII 1476 (1655)
T ss_pred c-----cc-------cc---ccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhC-----hHhhCEEEEE
Confidence 0 00 00 0001235556666666666543 3457999999999999999854 4567788877
Q ss_pred cCCCCCcc------------------------------------------c-----------------------------
Q 007311 530 SGFALHSA------------------------------------------E----------------------------- 538 (608)
Q Consensus 530 sG~~~~~~------------------------------------------~----------------------------- 538 (608)
++.+.... .
T Consensus 1477 s~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1556 (1655)
T PLN02980 1477 SGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGR 1556 (1655)
T ss_pred CCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcc
Confidence 65421100 0
Q ss_pred -----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC----------CcEEEEe-CCCCcCCCChh--hHHHH
Q 007311 539 -----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG----------CSVIIEH-DCGHIIPTRSP--YIDEI 600 (608)
Q Consensus 539 -----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~----------~~~vv~~-~gGH~ip~~~~--~~~~i 600 (608)
.....+++|+|+|+|+ +|..++ +.++++.+.+.+. ..++++. ++||.++.+.+ +.+.|
T Consensus 1557 ~~dl~~~L~~I~~PtLlI~Ge---~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I 1632 (1655)
T PLN02980 1557 QPSLWEDLKQCDTPLLLVVGE---KDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRAL 1632 (1655)
T ss_pred cchHHHHHhhCCCCEEEEEEC---CCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHH
Confidence 0124678999999999 898775 6677787777652 1344444 56999766533 67788
Q ss_pred HHHHHH
Q 007311 601 KSFLQR 606 (608)
Q Consensus 601 ~~Fl~~ 606 (608)
.+||.+
T Consensus 1633 ~~FL~~ 1638 (1655)
T PLN02980 1633 RKFLTR 1638 (1655)
T ss_pred HHHHHh
Confidence 888865
No 95
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.17 E-value=7.1e-10 Score=112.45 Aligned_cols=181 Identities=20% Similarity=0.179 Sum_probs=117.5
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+..+-+|+++||+|...+.+. ..++++|. .++.+..+|-. ++.. ++ +..+...
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~---~~~a~~l~~~g~~v~a~D~~--------GhG~----Sd----------Gl~~yi~- 104 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRY---QSTAKRLAKSGFAVYAIDYE--------GHGR----SD----------GLHAYVP- 104 (313)
T ss_pred CCCceEEEEEcCCcccchhhH---HHHHHHHHhCCCeEEEeecc--------CCCc----CC----------CCcccCC-
Confidence 355678999999999985433 15666665 58899988865 2110 00 0111111
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCcc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFR 524 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~ 524 (608)
.| +..+++...++.....+. +...-++|+||||+|++.++++. +.-..
T Consensus 105 ----------------~~--------d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----p~~w~ 155 (313)
T KOG1455|consen 105 ----------------SF--------DLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----PNFWD 155 (313)
T ss_pred ----------------cH--------HHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----Ccccc
Confidence 11 122333444444333222 22225899999999999999853 44566
Q ss_pred EEEEecCCCCCccc------------------------------------------------------------------
Q 007311 525 FAILCSGFALHSAE------------------------------------------------------------------ 538 (608)
Q Consensus 525 ~vIlisG~~~~~~~------------------------------------------------------------------ 538 (608)
|+|+++.-.....+
T Consensus 156 G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~ 235 (313)
T KOG1455|consen 156 GAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVT 235 (313)
T ss_pred cceeeecccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHH
Confidence 67765554332211
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCC--Chh----hHHHHHHHHHHh
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPT--RSP----YIDEIKSFLQRF 607 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~--~~~----~~~~i~~Fl~~~ 607 (608)
.....+.+|.|++||+ .|.+..++.++.|++.......++..++| =|.+-. .++ +..+|.+||.++
T Consensus 236 ~~le~~l~~vtvPflilHG~---dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 236 ADLEKNLNEVTVPFLILHGT---DDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHhcccccccEEEEecC---CCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 2456889999999999 89999999999999999877788888887 687542 222 567889998764
No 96
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.
Probab=99.17 E-value=5.4e-11 Score=124.16 Aligned_cols=86 Identities=22% Similarity=0.320 Sum_probs=64.4
Q ss_pred CcEEEecCChhhhhccccCCCCccccCcccccCC---------------------------CchHHHHhhhh-hcCCCeE
Q 007311 158 KLVLLDARNLYETRIGKFRTPSVETLDPEIRQFS---------------------------DLPTWIDNNAE-QLQGKHV 209 (608)
Q Consensus 158 ~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~---------------------------~~~~~~~~~~~-~~k~k~I 209 (608)
+.+|||||++.||+.|||+| ++|.|..+.. .++..+++... ..++++|
T Consensus 2 ~~~liDVRsp~Ef~~ghipg----AiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~~~~~~v 77 (311)
T TIGR03167 2 FDPLIDVRSPAEFAEGHLPG----AINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFADGPPQP 77 (311)
T ss_pred CCEEEECCCHHHHhcCCCcC----CEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhcCCCCcE
Confidence 46899999999999999999 4444432110 13333333222 2345569
Q ss_pred EEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 210 LMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 210 v~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
|+|| ++|.||..++.+|++. || +|+.|.||+.+|....
T Consensus 78 vvyC~~gG~RS~~aa~~L~~~--G~-~v~~L~GG~~aw~~~~ 116 (311)
T TIGR03167 78 LLYCWRGGMRSGSLAWLLAQI--GF-RVPRLEGGYKAYRRFV 116 (311)
T ss_pred EEEECCCChHHHHHHHHHHHc--CC-CEEEecChHHHHHHhh
Confidence 9999 5899999999999987 99 7999999999998764
No 97
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.12 E-value=3.1e-09 Score=109.31 Aligned_cols=177 Identities=17% Similarity=0.201 Sum_probs=124.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
...|.+|+||||=.+--+|..|+..|+.. .++++++|-+ ++.--+.|.
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~~---~~rviA~Dlr-----------------------------GyG~Sd~P~ 89 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLASR---GYRVIAPDLR-----------------------------GYGFSDAPP 89 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhhc---ceEEEecCCC-----------------------------CCCCCCCCC
Confidence 34578999999999999999888777654 4999999876 111101010
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
. .....+...+..+..+|+..+ ....++||++||++|..+|+.+ +..++++|.
T Consensus 90 ----------------~-----~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~-----Perv~~lv~ 143 (322)
T KOG4178|consen 90 ----------------H-----ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFY-----PERVDGLVT 143 (322)
T ss_pred ----------------C-----cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhC-----hhhcceEEE
Confidence 0 012245566666777777766 4457999999999999999954 567888888
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++..+....
T Consensus 144 ~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~ 223 (322)
T KOG4178|consen 144 LNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAF 223 (322)
T ss_pred ecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHH
Confidence 8766551100
Q ss_pred ----------------------------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccCCcEEEEeCCCCc
Q 007311 539 ----------------------------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 539 ----------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
.....+.+|+++++|. +|++.+.. .+...+..+......++..++||+
T Consensus 224 ~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~---~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~ 300 (322)
T KOG4178|consen 224 YVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGD---LDPVLPYPIFGELYRKDVPRLTERVVIEGIGHF 300 (322)
T ss_pred HHhccccccccccchhhHHHhhCchhccccccccccceEEEEec---CcccccchhHHHHHHHhhccccceEEecCCccc
Confidence 0234688999999999 89998776 344455555554456666778999
Q ss_pred CCCChh--hHHHHHHHHHHh
Q 007311 590 IPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 590 ip~~~~--~~~~i~~Fl~~~ 607 (608)
+..+.+ ..+.+..||.++
T Consensus 301 vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 301 VQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccCHHHHHHHHHHHHHhh
Confidence 987754 678899999875
No 98
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.08 E-value=1.3e-09 Score=116.03 Aligned_cols=61 Identities=18% Similarity=0.162 Sum_probs=46.3
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-C-CCCcCCCChh--hHHHHHHHHHH
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-D-CGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~-gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.++++|+|+++|+ +|.++|.+.++++.+.+... ..+++. + +||.++.+.+ +...|.+||.+
T Consensus 274 ~~I~~PtLvi~G~---~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 274 EAIRVPTVVVAVE---GDRLVPLADLVELAEGLGPR-GSLRVLRSPYGHDAFLKETDRIDAILTTALRS 338 (343)
T ss_pred hcCCCCeEEEEeC---CCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccHHHHhcCHHHHHHHHHHHHHh
Confidence 4678999999999 89999999999998887433 344444 3 7999877543 56777788764
No 99
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=99.08 E-value=3e-10 Score=117.66 Aligned_cols=101 Identities=23% Similarity=0.265 Sum_probs=73.9
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCC----------hhhhhccccCCCCccccCcccccCC--------
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARN----------LYETRIGKFRTPSVETLDPEIRQFS-------- 191 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn----------~~E~~~Gh~~g~~~~~l~~~~~~~~-------- 191 (608)
.-++++++++.+++ ++++|||||+ +.||..|||+|+. +.+...+.
T Consensus 5 ~lvs~~~l~~~l~~-------------~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~----~~~~~~~~~~~~~~~~ 67 (281)
T PRK11493 5 WFVAADWLAEHIDD-------------PEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAV----FFDIEALSDHTSPLPH 67 (281)
T ss_pred cccCHHHHHHhcCC-------------CCeEEEEeeCCCCCccccchHHHHHhCcCCCCE----EcCHHHhcCCCCCCCC
Confidence 45899999999965 5799999997 6889999999954 32211111
Q ss_pred Cc--hHHHHhh---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 DL--PTWIDNN---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 ~~--~~~~~~~---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+ ++.+.+. +...++++||+||.+|.+ +.++...|+.. ||+||+.|.||+.+|.++
T Consensus 68 ~~~~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~--G~~~v~~l~GG~~~W~~~ 129 (281)
T PRK11493 68 MMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTF--GVEKVSILAGGLAGWQRD 129 (281)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHh--cCCcEEEcCCCHHHHHHc
Confidence 11 2223322 234689999999999876 45666778775 999999999999999864
No 100
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=99.07 E-value=2.3e-10 Score=129.77 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=77.0
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCc------ccc-cC---CCchHHHHh
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDP------EIR-QF---SDLPTWIDN 199 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~------~~~-~~---~~~~~~~~~ 199 (608)
..|++++++++|++ ++++|||||+..||..|||+|+....++. +.. .+ .+|...+.+
T Consensus 9 ~lIs~~eL~~~l~~-------------~~vvIIDvR~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~ 75 (610)
T PRK09629 9 LVIEPNDLLERLDA-------------PELILVDLTSSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGE 75 (610)
T ss_pred ceecHHHHHHHhcC-------------CCEEEEECCChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHH
Confidence 46899999999976 47999999999999999999954221110 000 01 112222322
Q ss_pred hhhhcCCCeEEEEcCCC-ccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 200 NAEQLQGKHVLMYCTGG-IRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 200 ~~~~~k~k~Iv~yCtgG-iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+...++++||+||.+| .++.++...|+.. ||++|+.|.||+.+|..+
T Consensus 76 -lGI~~d~~VVvYd~~g~~~A~R~~w~L~~~--G~~~V~iLdGG~~aW~~a 123 (610)
T PRK09629 76 -LGHNPDAVYVVYDDEGGGWAGRFIWLLDVI--GHSGYHYLDGGVLAWEAQ 123 (610)
T ss_pred -cCCCCCCEEEEECCCCCchHHHHHHHHHHc--CCCCEEEcCCCHHHHHHc
Confidence 3457899999999976 5777888888886 999999999999999875
No 101
>PRK07581 hypothetical protein; Validated
Probab=99.07 E-value=2.2e-09 Score=113.87 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE-eC-CCCcCCCC--hhhHHHHHHHHHHhC
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE-HD-CGHIIPTR--SPYIDEIKSFLQRFL 608 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~-~~-gGH~ip~~--~~~~~~i~~Fl~~~L 608 (608)
+|++|+|+|+|+ +|..+|.+.++.+++.+++ .++++ .+ .||..... +.+...|.+||+++|
T Consensus 273 ~I~~PtLvI~G~---~D~~~p~~~~~~l~~~ip~--a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 273 SITAKTFVMPIS---TDLYFPPEDCEAEAALIPN--AELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCC--CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 478999999999 8999999999999998877 44444 44 69976554 347888999998875
No 102
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=99.07 E-value=4.4e-10 Score=114.61 Aligned_cols=181 Identities=19% Similarity=0.310 Sum_probs=123.3
Q ss_pred HHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCcccccccCCCCCCCCccccCCccccceeeecceee
Q 007311 34 SNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDFKLASSDYPLNGKVAHECGFTSLSIRIVKELVT 113 (608)
Q Consensus 34 ~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~k~~~~~~~~~~~~~~~~~F~~l~vr~~~eiv~ 113 (608)
..|.+-|+.|-| -|+| |++.++|...-.+.-.+.|++-..-++.- ...|+.+++|-+++=..
T Consensus 221 t~C~dgGVlGpv-------~Gvi-G~mQALE~iKli~~~~~~~s~~lllfdg~----------~~~~r~irlR~r~~~C~ 282 (427)
T KOG2017|consen 221 TNCADGGVLGPV-------TGVI-GCMQALETIKLIAGIGESLSGRLLLFDGL----------SGHFRTIRLRSRRPKCA 282 (427)
T ss_pred cccccCceeecc-------hhhh-hHHHHHHHHHHHHccCccCCcceEEEecc----------cceeEEEEeccCCCCCc
Confidence 457777877754 3555 57788887766665567777655444422 22588888887765322
Q ss_pred -cCCCCCCC------------CC-----CCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhcccc
Q 007311 114 -FSSHPLLN------------PP-----DVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKF 175 (608)
Q Consensus 114 -~~~~~~~~------------~~-----~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~ 175 (608)
.|.++.+. .. .....-..||..||+++++++ ...++||||...||+|.|+
T Consensus 283 ~Cg~n~tit~~~dYe~fCg~~~~~~~~l~lL~~~~Rvsv~d~k~il~~~------------~~h~llDvRp~~~~eI~~l 350 (427)
T KOG2017|consen 283 VCGKNPTITSLIDYELFCGSSATDKCPLKLLEPDERVSVTDYKRILDSG------------AKHLLLDVRPSHEYEICRL 350 (427)
T ss_pred ccCCCCccCcccchhcccCCccccccchhcCChhhcccHHHHHHHHhcC------------CCeEEEeccCcceEEEEec
Confidence 12222110 00 011224578999999999874 6789999999999999999
Q ss_pred CCCCccccCcccccCCCchHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 176 RTPSVETLDPEIRQFSDLPTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 176 ~g~~~~~l~~~~~~~~~~~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
+. ++|.++.. ++....+.+ .....++|++.|+.|+-|.+|+.+||++ .+..+|.-+.||..+|..++..
T Consensus 351 P~----avNIPL~~---l~~~~~~~~~~~~~~~~~~I~ViCrrGNdSQ~Av~~Lre~-~~~~~vrDvigGl~~w~~~vd~ 422 (427)
T KOG2017|consen 351 PE----AVNIPLKE---LRSRSGKKLQGDLNTESKDIFVICRRGNDSQRAVRILREK-FPDSSVRDVIGGLKAWAAKVDP 422 (427)
T ss_pred cc----ccccchhh---hhhhhhhhhcccccccCCCEEEEeCCCCchHHHHHHHHhh-CCchhhhhhhhHHHHHHHhcCc
Confidence 98 66665332 322211111 1235678999999999999999999997 4566899999999999988754
No 103
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=99.06 E-value=3.9e-10 Score=104.33 Aligned_cols=105 Identities=21% Similarity=0.120 Sum_probs=72.1
Q ss_pred cCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh--------hhhhc------------cccCCCCccccCcc---cc
Q 007311 132 LSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL--------YETRI------------GKFRTPSVETLDPE---IR 188 (608)
Q Consensus 132 lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~--------~E~~~------------Gh~~g~~~~~l~~~---~~ 188 (608)
+|++++.+.+++. ..+++++|||+|.. .||.. |||+|+....+... ..
T Consensus 1 vs~e~l~~~l~~~---------~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~ 71 (138)
T cd01445 1 KSTEQLAENLEAG---------KVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAG 71 (138)
T ss_pred CCHHHHHHHhhcc---------ccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCC
Confidence 5788999998741 01257999999977 88887 99999642211100 00
Q ss_pred cC-CCch--HHHHhh---hhhcCCCeEEEEcCC---CccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 189 QF-SDLP--TWIDNN---AEQLQGKHVLMYCTG---GIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 189 ~~-~~~~--~~~~~~---~~~~k~k~Iv~yCtg---GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
.+ ..+| +.+.+. +...++++||+||.+ |.++.++.-.|+.. |++||+.|.||+.+|+
T Consensus 72 ~~~~~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~--G~~~v~ildGG~~~W~ 137 (138)
T cd01445 72 FEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLC--GHPDVAILDGGFFEWF 137 (138)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHc--CCCCeEEeCCCHHHhh
Confidence 01 1122 122222 244678999999976 78888887788775 9999999999999996
No 104
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.06 E-value=6.4e-09 Score=101.00 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 478 DVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
.++++.+.+.|++..+ ...|+|-|+||..|+.++.+.. ++. |++++...+...
T Consensus 43 ~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~-------~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~ 114 (187)
T PF05728_consen 43 EEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG-------LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYE 114 (187)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC-------CCE-EEEcCCCCHHHHHHHhhCccccCCCCccce
Confidence 4567778888877653 3689999999999999998542 444 566655433211
Q ss_pred ------c-------ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 539 ------F-------EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 539 ------~-------~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
. .......++++++|+ .|.+++.+.+ .+.+.. ...+++.+|+|.+-.-.+++..|++|+
T Consensus 115 ~~~~~~~~l~~l~~~~~~~~~~~lvll~~---~DEvLd~~~a---~~~~~~-~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 115 LTEEHIEELKALEVPYPTNPERYLVLLQT---GDEVLDYREA---VAKYRG-CAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred echHhhhhcceEeccccCCCccEEEEEec---CCcccCHHHH---HHHhcC-ceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 0 012345789999999 8999997444 344444 367788888999988788899999987
No 105
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.05 E-value=6.2e-09 Score=108.91 Aligned_cols=58 Identities=24% Similarity=0.315 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChhhHHHHHHHHHHhC
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
++|+|++||. +|.++|.+.++++++.+++ ..+++. ++||... .++.+++|.+|+..||
T Consensus 248 ~~P~lii~g~---~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~-~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 248 NIPTYIVHGR---YDLCCPLQSAWALHKAFPE--AELKVTNNAGHSAF-DPNNLAALVHALETYL 306 (306)
T ss_pred CCCeEEEecC---CCCCCCHHHHHHHHHhCCC--CEEEEECCCCCCCC-ChHHHHHHHHHHHHhC
Confidence 5899999999 8999999999999999876 455555 5699974 5678999999999886
No 106
>PLN02442 S-formylglutathione hydrolase
Probab=99.05 E-value=1e-08 Score=106.41 Aligned_cols=202 Identities=13% Similarity=0.117 Sum_probs=112.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccC-CccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHEL-PFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|.|++|||++++...|.... .+.+.+. ..+.+|.+|++..= .+... .+ .-....+..|+..
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~-~~~~~~~~~g~~Vv~pd~~~~g~~~~~~--------~~-----~~~~~~~~~~~~~ 110 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKS-GAQRAAAARGIALVAPDTSPRGLNVEGE--------AD-----SWDFGVGAGFYLN 110 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhh-hHHHHHhhcCeEEEecCCCCCCCCCCCC--------cc-----ccccCCCcceeec
Confidence 45689999999999998886332 3333333 46888999876210 00000 00 0000001122221
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.. ...|. ..++ .+.-.++...++.+.+.. .....+|+|+||||.+|+.++.+. +..++++
T Consensus 111 ~~-----~~~~~-------~~~~--~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~-----p~~~~~~ 171 (283)
T PLN02442 111 AT-----QEKWK-------NWRM--YDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKN-----PDKYKSV 171 (283)
T ss_pred cc-----cCCCc-------ccch--hhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhC-----chhEEEE
Confidence 00 00110 0000 011123333344444332 234457999999999999999853 5568889
Q ss_pred EEecCCCCCcc-------------------c--------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccC-
Q 007311 527 ILCSGFALHSA-------------------E--------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG- 577 (608)
Q Consensus 527 IlisG~~~~~~-------------------~--------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~- 577 (608)
+++++...+.. + ......++|+++++|+ +|..++.. .++.+++.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~---~D~~v~~~~~s~~~~~~l~~~g 248 (283)
T PLN02442 172 SAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGE---ADKFLKEQLLPENFEEACKEAG 248 (283)
T ss_pred EEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECC---CCccccccccHHHHHHHHHHcC
Confidence 99998853210 0 0122468999999999 89998863 356666666532
Q ss_pred -CcEEEEeCC-CCcCCCChhhHHHHHHHHHHh
Q 007311 578 -CSVIIEHDC-GHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 578 -~~~vv~~~g-GH~ip~~~~~~~~i~~Fl~~~ 607 (608)
..++.++++ +|.+..-...+++...|..++
T Consensus 249 ~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 249 APVTLRLQPGYDHSYFFIATFIDDHINHHAQA 280 (283)
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHHHHHH
Confidence 256666666 898764444555555555543
No 107
>PRK05855 short chain dehydrogenase; Validated
Probab=99.05 E-value=2.2e-09 Score=121.43 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+|+|+ +|+++|.+..+.+++.+.. ..++..++||..+.+.+ +.+.|.+|+..
T Consensus 231 ~~~~P~lii~G~---~D~~v~~~~~~~~~~~~~~--~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 231 YTDVPVQLIVPT---GDPYVRPALYDDLSRWVPR--LWRREIKAGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred CccCceEEEEeC---CCcccCHHHhccccccCCc--ceEEEccCCCcchhhChhHHHHHHHHHHHh
Confidence 378999999999 8999999999988877765 55666678999876543 56778888764
No 108
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.03 E-value=8.6e-10 Score=109.51 Aligned_cols=107 Identities=21% Similarity=0.247 Sum_probs=72.4
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC-CCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHH
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG-FALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELA 571 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG-~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~ 571 (608)
...+++|||+||.+|+.++.. ...++++|...| ..+.........+++|+++++|+ +|+.++.+..+++.
T Consensus 98 ~kig~vGfc~GG~~a~~~a~~------~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~---~D~~~~~~~~~~~~ 168 (218)
T PF01738_consen 98 GKIGVVGFCWGGKLALLLAAR------DPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGE---NDPFFPPEEVEALE 168 (218)
T ss_dssp EEEEEEEETHHHHHHHHHHCC------TTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEET---T-TTS-HHHHHHHH
T ss_pred CcEEEEEEecchHHhhhhhhh------ccccceEEEEcCCCCCCcchhhhcccCCCEeecCcc---CCCCCChHHHHHHH
Confidence 456899999999999998862 246899999888 23333334567899999999999 89999999988888
Q ss_pred HHhcc--CCcEEEEeCC-CCcCCCChh----------hHHHHHHHHHHhC
Q 007311 572 KAFEE--GCSVIIEHDC-GHIIPTRSP----------YIDEIKSFLQRFL 608 (608)
Q Consensus 572 ~~~~~--~~~~vv~~~g-GH~ip~~~~----------~~~~i~~Fl~~~L 608 (608)
+.+.. ...++..|++ +|.+-.... -.+.+.+||++.|
T Consensus 169 ~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 169 EALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 88843 2477888875 898644321 2456778887765
No 109
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.02 E-value=6.3e-09 Score=107.50 Aligned_cols=177 Identities=20% Similarity=0.273 Sum_probs=116.1
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+..||++||||..-..|..-+..|++ ...+.++|-| + ++ .+.+|.|.
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~----~~~vyaiDll--------G------~G-------~SSRP~F~------ 136 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK----IRNVYAIDLL--------G------FG-------RSSRPKFS------ 136 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh----cCceEEeccc--------C------CC-------CCCCCCCC------
Confidence 4456699999999999988866666665 6889999987 0 00 01111111
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.|+ +....+.++.+++.-.+.+ ....|+|||+||.+|+.+|+.+ +.+++.+|+
T Consensus 137 ---------------~d~------~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKy-----PerV~kLiL 190 (365)
T KOG4409|consen 137 ---------------IDP------TTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKY-----PERVEKLIL 190 (365)
T ss_pred ---------------CCc------ccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhC-----hHhhceEEE
Confidence 111 1122355555666655555 4447999999999999999954 677999999
Q ss_pred ecCCCCCc---cc-------------------------------------------------------------------
Q 007311 529 CSGFALHS---AE------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~---~~------------------------------------------------------------------- 538 (608)
++++.-.. .+
T Consensus 191 vsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~ 270 (365)
T KOG4409|consen 191 VSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNA 270 (365)
T ss_pred ecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcC
Confidence 99775322 00
Q ss_pred ------------------------cccC--CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE-EEeCCCCcCC
Q 007311 539 ------------------------FEHR--SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI-IEHDCGHIIP 591 (608)
Q Consensus 539 ------------------------~~~~--~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v-v~~~gGH~ip 591 (608)
.... +-.+|++.|||+ +..+....+.++.+.+....+++ ++.++||.+-
T Consensus 271 ~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~----~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvy 346 (365)
T KOG4409|consen 271 QNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGD----RDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVY 346 (365)
T ss_pred CCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecC----cccccchhHHHHHHHhhcccceEEEecCCCceee
Confidence 1111 225999999998 66788888888877644333444 4556799876
Q ss_pred CChh--hHHHHHHHHHHh
Q 007311 592 TRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 592 ~~~~--~~~~i~~Fl~~~ 607 (608)
.+.+ +++.|..++...
T Consensus 347 lDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 347 LDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCHHHHHHHHHHHHhcc
Confidence 6644 677777777653
No 110
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=99.01 E-value=1.1e-09 Score=115.38 Aligned_cols=102 Identities=22% Similarity=0.231 Sum_probs=73.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecC--------C-hhhhhccccCCCCccccCcccccCC--------
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDAR--------N-LYETRIGKFRTPSVETLDPEIRQFS-------- 191 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvR--------n-~~E~~~Gh~~g~~~~~l~~~~~~~~-------- 191 (608)
...|+++++++++++ ++++||||| + ..||..|||+|+. +.+...+.
T Consensus 21 ~~lvs~~~L~~~l~~-------------~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi----~i~~~~~~~~~~~~~~ 83 (320)
T PLN02723 21 EPVVSVDWLHANLRE-------------PDVKVLDASWYMPDEQRNPIQEYQVAHIPGAL----FFDLDGISDRTTDLPH 83 (320)
T ss_pred CceecHHHHHHHhcC-------------CCeEEEEeeccccCCCCchHHHHHhccCCCCe----ecCHHHhcCCCCCcCC
Confidence 467999999999965 579999996 3 3789999999954 32211111
Q ss_pred Cch--HHHHhh---hhhcCCCeEEEEcCCCccH-HHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 192 DLP--TWIDNN---AEQLQGKHVLMYCTGGIRC-EMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 192 ~~~--~~~~~~---~~~~k~k~Iv~yCtgGiR~-~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+| +.+.+. +...++++||+||.+|.+. .++...|+.. ||+||+.|.||+.+|.++
T Consensus 84 ~lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~--G~~~V~~LdGG~~~W~~~ 145 (320)
T PLN02723 84 MLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVF--GHEKVWVLDGGLPKWRAS 145 (320)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHc--CCCceEEcCCCHHHHHHc
Confidence 111 222222 2345789999999888765 5666678776 999999999999999874
No 111
>PLN02511 hydrolase
Probab=99.01 E-value=6.5e-09 Score=112.63 Aligned_cols=61 Identities=23% Similarity=0.286 Sum_probs=42.7
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHH-HHHHHHhccCCcEEEE-eCCCCcCCCChh--------hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQAS-KELAKAFEEGCSVIIE-HDCGHIIPTRSP--------YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~-~~l~~~~~~~~~~vv~-~~gGH~ip~~~~--------~~~~i~~Fl~~~ 607 (608)
..|++|+|+|+|. +|+++|.+.. ..+.+..++ ..++. .++||....+.+ ..+.+.+||...
T Consensus 295 ~~I~vPtLiI~g~---dDpi~p~~~~~~~~~~~~p~--~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 295 KHVRVPLLCIQAA---NDPIAPARGIPREDIKANPN--CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred ccCCCCeEEEEcC---CCCcCCcccCcHhHHhcCCC--EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 4688999999999 8999997655 344455554 55554 457998655433 268888998754
No 112
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=98.98 E-value=9.6e-10 Score=115.91 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=75.6
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhh-----------hccccCCCCccccCcccccCCC----c-
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYET-----------RIGKFRTPSVETLDPEIRQFSD----L- 193 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~-----------~~Gh~~g~~~~~l~~~~~~~~~----~- 193 (608)
..++.+++.+.++. ++++|||+|+..|| ..|||+|+ ++.+...+.+ |
T Consensus 190 ~~~~~~~v~~~~~~-------------~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgA----vnip~~~~~~~~~~~~ 252 (320)
T PLN02723 190 LVWTLEQVKKNIED-------------KTYQHIDARSKARFDGAAPEPRKGIRSGHIPGS----KCVPFPQMLDSSQTLL 252 (320)
T ss_pred ceecHHHHHHhhcC-------------CCeEEEECCCcccccCCCCCCCCCCcCCcCCCC----cccCHHHhcCCCCCCC
Confidence 34688888888754 46889999999888 56999994 4433221111 1
Q ss_pred -hHHHHhhh---hhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 194 -PTWIDNNA---EQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 194 -~~~~~~~~---~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
++.+++.. ...++++||+||.+|+|+..+...|+.. ||+||+.+.||+..|...
T Consensus 253 ~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~--G~~~v~~YdGs~~eW~~~ 310 (320)
T PLN02723 253 PAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRL--GKTDVPVYDGSWTEWGAL 310 (320)
T ss_pred CHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCeeEeCCCHHHHhcC
Confidence 12233322 3468999999999999999999999876 999999999999999865
No 113
>PRK10985 putative hydrolase; Provisional
Probab=98.96 E-value=2.5e-08 Score=105.35 Aligned_cols=61 Identities=15% Similarity=0.182 Sum_probs=43.5
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcE-EEEeCCCCcCCCCh------h-hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSV-IIEHDCGHIIPTRS------P-YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~-vv~~~gGH~ip~~~------~-~~~~i~~Fl~~~ 607 (608)
..+++|+|+|+|+ +|++++.+....+.+..++ .. ++..++||....+- . ..+.+.+|+..+
T Consensus 252 ~~i~~P~lii~g~---~D~~~~~~~~~~~~~~~~~--~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 252 NQIRKPTLIIHAK---DDPFMTHEVIPKPESLPPN--VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred hCCCCCEEEEecC---CCCCCChhhChHHHHhCCC--eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 5778999999999 8999998888777666554 44 34456799754321 1 346778888654
No 114
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.95 E-value=6.5e-09 Score=102.69 Aligned_cols=126 Identities=23% Similarity=0.299 Sum_probs=87.4
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------- 538 (608)
.++.+++++|.+.-..+..+.+|+|+|+||.+|+.++.+. +..++++|..+|.......
T Consensus 46 ~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~-----~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~ 120 (213)
T PF00326_consen 46 DDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH-----PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYG 120 (213)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT-----CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHS
T ss_pred hhHHHHHHHHhccccccceeEEEEcccccccccchhhccc-----ceeeeeeeccceecchhcccccccccccccccccC
Confidence 3344444444332212335568999999999999999843 5678999998886543210
Q ss_pred ---------------cccCC--CCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeC-CCCcCCCCh---h
Q 007311 539 ---------------FEHRS--INCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHD-CGHIIPTRS---P 595 (608)
Q Consensus 539 ---------------~~~~~--i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~-gGH~ip~~~---~ 595 (608)
..... +++|+|++||+ +|.+||++.+.++.+.+... ..+++.++ .||.+.... .
T Consensus 121 ~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~---~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~ 197 (213)
T PF00326_consen 121 DPWDNPEFYRELSPISPADNVQIKPPVLIIHGE---NDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRD 197 (213)
T ss_dssp STTTSHHHHHHHHHGGGGGGCGGGSEEEEEEET---TBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHH
T ss_pred ccchhhhhhhhhccccccccccCCCCEEEEccC---CCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHH
Confidence 11233 78999999999 89999999999999988753 35666655 599776532 2
Q ss_pred hHHHHHHHHHHhC
Q 007311 596 YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ~~~~i~~Fl~~~L 608 (608)
..+.+.+||.+.|
T Consensus 198 ~~~~~~~f~~~~l 210 (213)
T PF00326_consen 198 WYERILDFFDKYL 210 (213)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 5788899998765
No 115
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.94 E-value=2.3e-08 Score=106.05 Aligned_cols=58 Identities=12% Similarity=0.228 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCCh---hhHHHHHHHHH
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRS---PYIDEIKSFLQ 605 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~---~~~~~i~~Fl~ 605 (608)
++|+|+++|+ +|++++.+.++++++.+......++.++ ++|.+..+. +.++.+.+||.
T Consensus 270 ~~P~Lii~G~---~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 270 DIPILFIHSK---GDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCEEEEEeC---CCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 6899999999 8999999999998877654336666665 489987653 35677777775
No 116
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.94 E-value=2.1e-08 Score=99.74 Aligned_cols=156 Identities=18% Similarity=0.250 Sum_probs=98.3
Q ss_pred CccEEEEecCCCCChHHHHHHH--HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 371 RKLRILCLHGFRQNASSFKGRT--ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~--~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+.|.||+|||.+++++.|...+ ..|++. .++-+++|+...... ...-..|+...
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~--~GfivvyP~~~~~~~----------------------~~~cw~w~~~~ 70 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADR--EGFIVVYPEQSRRAN----------------------PQGCWNWFSDD 70 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhc--CCeEEEcccccccCC----------------------CCCcccccccc
Confidence 4578999999999999998654 234332 467788887653211 01123454411
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
.. .+. .....+...++++......+..++.+.|+|.||+|+..++..+ +..|.++..
T Consensus 71 ~~-----------~g~-------~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~-----pd~faa~a~ 127 (220)
T PF10503_consen 71 QQ-----------RGG-------GDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAY-----PDLFAAVAV 127 (220)
T ss_pred cc-----------cCc-------cchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhC-----CccceEEEe
Confidence 00 000 1122345555555444433455667999999999999999844 667888888
Q ss_pred ecCCCCCccc-------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 529 CSGFALHSAE-------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 529 isG~~~~~~~-------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
.||....... .....-..|++++||+ .|.+|.+..+.++.+.+..
T Consensus 128 ~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~~~P~~v~hG~---~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 128 VSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYPGYPRIVFHGT---ADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred ecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCCCCCEEEEecC---CCCccCcchHHHHHHHHHH
Confidence 8876532110 0011224799999999 8999999988887776653
No 117
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.93 E-value=3.1e-08 Score=98.57 Aligned_cols=170 Identities=18% Similarity=0.183 Sum_probs=120.6
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHccCC-cEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLKNI-AEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~~~-~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+|+|+|+.|+++..|. .|++.|+.. ..++.++.|..-. +
T Consensus 2 ~lf~~p~~gG~~~~y~----~la~~l~~~~~~v~~i~~~~~~~------------------------------~------ 41 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYR----PLARALPDDVIGVYGIEYPGRGD------------------------------D------ 41 (229)
T ss_dssp EEEEESSTTCSGGGGH----HHHHHHTTTEEEEEEECSTTSCT------------------------------T------
T ss_pred eEEEEcCCccCHHHHH----HHHHhCCCCeEEEEEEecCCCCC------------------------------C------
Confidence 6999999999999999 999999986 9999998882100 0
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC--ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP--FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~--~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
.....++++.++...+.|....+ ...|+|||.||.+|+.+|.+.+. ....+..++++.
T Consensus 42 ------------------~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~--~G~~v~~l~liD 101 (229)
T PF00975_consen 42 ------------------EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEE--AGEEVSRLILID 101 (229)
T ss_dssp ------------------SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHH--TT-SESEEEEES
T ss_pred ------------------CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHH--hhhccCceEEec
Confidence 01234677777777777765322 24899999999999999998874 256788999999
Q ss_pred CCCCCccc------------------------------------------------cc-cCCC---CCCEEEEEcCCCCC
Q 007311 531 GFALHSAE------------------------------------------------FE-HRSI---NCPSLHIFGGDLGN 558 (608)
Q Consensus 531 G~~~~~~~------------------------------------------------~~-~~~i---~~PvL~i~G~~~~~ 558 (608)
+++|.... .. ...+ .+|..+.+.. .
T Consensus 102 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 178 (229)
T PF00975_consen 102 SPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYAL---D 178 (229)
T ss_dssp CSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEEC---S
T ss_pred CCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecC---C
Confidence 88774310 01 1122 3457777777 6
Q ss_pred CcccchH---HHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHhC
Q 007311 559 DRQVANQ---ASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 559 D~~Vp~~---~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~L 608 (608)
|+..... ...++.+.+... ..++..+|+|..... +.+.+|.++|.+.|
T Consensus 179 ~~~~~~~~~~~~~~W~~~~~~~-~~~~~v~G~H~~~l~-~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 179 DPLVSMDRLEEADRWWDYTSGD-VEVHDVPGDHFSMLK-PHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSSHHCGGHHCHHHGCBSSS-EEEEEESSETTGHHS-TTHHHHHHHHHHHH
T ss_pred CccccchhhhhHHHHHHhcCCC-cEEEEEcCCCcEecc-hHHHHHHHHHhccC
Confidence 7766544 333466666654 778888999997666 77888888887654
No 118
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.91 E-value=5.9e-08 Score=101.40 Aligned_cols=175 Identities=17% Similarity=0.171 Sum_probs=111.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+||++||++....-+. .|+..|. .++.++..|-| ++. .++ ++.+
T Consensus 35 g~Vvl~HG~~Eh~~ry~----~la~~l~~~G~~V~~~D~R--------GhG--------~S~------r~~r-------- 80 (298)
T COG2267 35 GVVVLVHGLGEHSGRYE----ELADDLAARGFDVYALDLR--------GHG--------RSP------RGQR-------- 80 (298)
T ss_pred cEEEEecCchHHHHHHH----HHHHHHHhCCCEEEEecCC--------CCC--------CCC------CCCc--------
Confidence 68999999999998888 6666665 68999999987 111 000 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+..+ ....+...++.+.+.+.. .+....|+||||||.+|+.++... ..+++++|+.
T Consensus 81 -----------g~~~------~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~-----~~~i~~~vLs 138 (298)
T COG2267 81 -----------GHVD------SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY-----PPRIDGLVLS 138 (298)
T ss_pred -----------CCch------hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC-----CccccEEEEE
Confidence 0000 011122222333333332 234448999999999999999854 4677788887
Q ss_pred cCCCCCc--------------------------c----c-----------------------------------------
Q 007311 530 SGFALHS--------------------------A----E----------------------------------------- 538 (608)
Q Consensus 530 sG~~~~~--------------------------~----~----------------------------------------- 538 (608)
|+..... . .
T Consensus 139 sP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~ 218 (298)
T COG2267 139 SPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV 218 (298)
T ss_pred CccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc
Confidence 7654322 0 0
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCcccc-hHHHHHHHHHhccCCcEEEEeCC-CCcCCCChh-----hHHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQVA-NQASKELAKAFEEGCSVIIEHDC-GHIIPTRSP-----YIDEIKSFLQR 606 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~Vp-~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~~~-----~~~~i~~Fl~~ 606 (608)
.....+.+|+|+++|+ +|++++ .+.+.++.+.......+++.+++ -|.+-.+++ ..+.+.+||.+
T Consensus 219 ~~~~~~~~~~~PvLll~g~---~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 219 PALRDAPAIALPVLLLQGG---DDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cchhccccccCCEEEEecC---CCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 1134678999999999 899999 68888877777765456666655 798765543 45566666654
No 119
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=98.90 E-value=3e-09 Score=110.22 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=65.3
Q ss_pred CCcEEEecCChhhhh-----------ccccCCCCccccCcccccCCC-----chHHHHhhh---hhcCCCeEEEEcCCCc
Q 007311 157 KKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFSD-----LPTWIDNNA---EQLQGKHVLMYCTGGI 217 (608)
Q Consensus 157 ~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~~-----~~~~~~~~~---~~~k~k~Iv~yCtgGi 217 (608)
.+++|||+|...||. .|||+|+ ++.+...+.+ -++.+++.+ ...++++||+||.+|+
T Consensus 167 ~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA----~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~ 242 (281)
T PRK11493 167 KTAQIVDARPAARFNAEVDEPRPGLRRGHIPGA----LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGV 242 (281)
T ss_pred CCcEEEeCCCccceeeeccCCCCCcccccCCCc----CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHH
Confidence 468999999999984 6999994 4433222211 133343322 2357899999999999
Q ss_pred cHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 218 RCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 218 R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
|+..+..+|+.. ||+||+.+.||+..|..
T Consensus 243 ~A~~~~~~l~~~--G~~~v~~y~Gs~~eW~~ 271 (281)
T PRK11493 243 TAAVVVLALATL--DVPNVKLYDGAWSEWGA 271 (281)
T ss_pred HHHHHHHHHHHc--CCCCceeeCCCHHHHcc
Confidence 999999999876 99999999999999985
No 120
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.89 E-value=3.3e-08 Score=94.82 Aligned_cols=115 Identities=20% Similarity=0.184 Sum_probs=76.4
Q ss_pred HHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC-ccc----------cccCCCCCCEEE
Q 007311 482 AYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH-SAE----------FEHRSINCPSLH 550 (608)
Q Consensus 482 ~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~-~~~----------~~~~~i~~PvL~ 550 (608)
..|.+.|.....-..|+|||.|+..++.++.. ....+++++++++++-+. ... .....+.+|.++
T Consensus 44 ~~l~~~i~~~~~~~ilVaHSLGc~~~l~~l~~----~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~v 119 (171)
T PF06821_consen 44 QALDQAIDAIDEPTILVAHSLGCLTALRWLAE----QSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIV 119 (171)
T ss_dssp HHHHHCCHC-TTTEEEEEETHHHHHHHHHHHH----TCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEE
T ss_pred HHHHHHHhhcCCCeEEEEeCHHHHHHHHHHhh----cccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEE
Confidence 34555555444445899999999999999952 346789999999999874 111 122356788999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCCh-hhHHHHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRS-PYIDEIKSFLQ 605 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~-~~~~~i~~Fl~ 605 (608)
|.++ +|+.+|.+.++++++.+.. ..+..-++||+...+- ....++.+.|+
T Consensus 120 iaS~---nDp~vp~~~a~~~A~~l~a--~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 120 IASD---NDPYVPFERAQRLAQRLGA--ELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EEET---TBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EEcC---CCCccCHHHHHHHHHHcCC--CeEECCCCCCcccccCCCchHHHHHHhc
Confidence 9999 9999999999999999964 4445556799975421 13445555544
No 121
>PLN00021 chlorophyllase
Probab=98.87 E-value=3.3e-08 Score=103.88 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=101.6
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
...+.||++||++.+...|. .+.+.|. .++.++.+|.+-..+ ....
T Consensus 50 g~~PvVv~lHG~~~~~~~y~----~l~~~Las~G~~VvapD~~g~~~------------------------~~~~----- 96 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYS----QLLQHIASHGFIVVAPQLYTLAG------------------------PDGT----- 96 (313)
T ss_pred CCCCEEEEECCCCCCcccHH----HHHHHHHhCCCEEEEecCCCcCC------------------------CCch-----
Confidence 44578999999999998888 5555554 368999988651000 0000
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh--------CCceEEEecChhHHHHHHHHHHHhhhhCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE--------GPFDGILGFSQGAAMAASVCAQWERLKGE 520 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~--------~~~~~IlGFSQGa~vAl~la~~~~~~~~~ 520 (608)
...++..+.++++.+.+... ....+|+|||+||.+|+.+|....+....
T Consensus 97 -----------------------~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~ 153 (313)
T PLN00021 97 -----------------------DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLP 153 (313)
T ss_pred -----------------------hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccc
Confidence 01123445566666544321 13457999999999999999865432223
Q ss_pred CCccEEEEecCCCCCc---------cc--cccCCCCCCEEEEEcCCCCCC-----cccc----hHH-HHHHHHHhccCCc
Q 007311 521 IDFRFAILCSGFALHS---------AE--FEHRSINCPSLHIFGGDLGND-----RQVA----NQA-SKELAKAFEEGCS 579 (608)
Q Consensus 521 ~~l~~vIlisG~~~~~---------~~--~~~~~i~~PvL~i~G~~~~~D-----~~Vp----~~~-~~~l~~~~~~~~~ 579 (608)
.+++++|++....-.. .. .....+.+|+|++.+. .| ..+| ... ..++.+.++....
T Consensus 154 ~~v~ali~ldPv~g~~~~~~~~p~il~~~~~s~~~~~P~liig~g---~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~ 230 (313)
T PLN00021 154 LKFSALIGLDPVDGTSKGKQTPPPVLTYAPHSFNLDIPVLVIGTG---LGGEPRNPLFPPCAPDGVNHAEFFNECKAPAV 230 (313)
T ss_pred cceeeEEeeccccccccccCCCCcccccCcccccCCCCeEEEecC---CCcccccccccccCCCCCCHHHHHHhcCCCee
Confidence 4688889887643211 00 1233478999999888 44 2222 333 3678888877656
Q ss_pred EEEEeCCCCc
Q 007311 580 VIIEHDCGHI 589 (608)
Q Consensus 580 ~vv~~~gGH~ 589 (608)
.++..++||.
T Consensus 231 ~~~~~~~gH~ 240 (313)
T PLN00021 231 HFVAKDYGHM 240 (313)
T ss_pred eeeecCCCcc
Confidence 7777788997
No 122
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=98.84 E-value=4.9e-09 Score=119.02 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=76.2
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh--------ccccCCCCccccCccc---ccCCCchHHHH
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR--------IGKFRTPSVETLDPEI---RQFSDLPTWID 198 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~--------~Gh~~g~~~~~l~~~~---~~~~~~~~~~~ 198 (608)
..++.+++.+.+++ ++++|||+|++.||. .|||+|+.+....... ..|.. ++.+.
T Consensus 147 ~~v~~e~v~~~l~~-------------~~~~iIDaR~~~ef~G~~~~~~r~GHIPGAvnip~~~~~~~~~~lk~-~~el~ 212 (610)
T PRK09629 147 PTATREYLQSRLGA-------------ADLAIWDARAPTEYSGEKVVAAKGGHIPGAVNFEWTAGMDKARNLRI-RQDMP 212 (610)
T ss_pred ccccHHHHHHhhCC-------------CCcEEEECCCccccCCcccccccCCCCCCCeecCHHHhcCCCCCCCC-HHHHH
Confidence 45788998888865 478899999999994 7999995432211000 01111 22233
Q ss_pred hh---hhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 199 NN---AEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 199 ~~---~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+. ....++++||+||.+|.|+..+...|+.. ||+||+.+.||+..|...
T Consensus 213 ~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~l--G~~~V~~YdGsw~eW~~~ 264 (610)
T PRK09629 213 EILRDLGITPDKEVITHCQTHHRSGFTYLVAKAL--GYPRVKAYAGSWGEWGNH 264 (610)
T ss_pred HHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHc--CCCCcEEeCCCHHHHhCC
Confidence 22 23468999999999999999999999876 999999999999999865
No 123
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.83 E-value=1e-07 Score=96.23 Aligned_cols=190 Identities=17% Similarity=0.210 Sum_probs=124.6
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
|.||++|++.+-...++ .+++.|. .++.++.||.=..-. . +.... ....++..
T Consensus 28 P~VIv~hei~Gl~~~i~----~~a~rlA~~Gy~v~~Pdl~~~~~------~----------~~~~~--~~~~~~~~---- 81 (236)
T COG0412 28 PGVIVLHEIFGLNPHIR----DVARRLAKAGYVVLAPDLYGRQG------D----------PTDIE--DEPAELET---- 81 (236)
T ss_pred CEEEEEecccCCchHHH----HHHHHHHhCCcEEEechhhccCC------C----------CCccc--ccHHHHhh----
Confidence 88999999999998887 5555554 478888777332111 0 00000 00011110
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG 531 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG 531 (608)
+-.......+...++...+++|.+.-......++++|||+||.+|+.++.. .+.+++.|.+-|
T Consensus 82 -----------~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------~~~v~a~v~fyg 144 (236)
T COG0412 82 -----------GLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR------APEVKAAVAFYG 144 (236)
T ss_pred -----------hhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------cCCccEEEEecC
Confidence 000000002234556666666655543334557899999999999999973 226999999999
Q ss_pred CCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCCh-----h--------
Q 007311 532 FALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRS-----P-------- 595 (608)
Q Consensus 532 ~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~-----~-------- 595 (608)
...........++++|+|+.+|+ .|..+|.+.-..+.+.+... ...+..+.+ .|.+.... .
T Consensus 145 ~~~~~~~~~~~~~~~pvl~~~~~---~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~ 221 (236)
T COG0412 145 GLIADDTADAPKIKVPVLLHLAG---EDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAED 221 (236)
T ss_pred CCCCCcccccccccCcEEEEecc---cCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHH
Confidence 88765544567999999999999 89999999999999988875 466777776 49876431 1
Q ss_pred hHHHHHHHHHHhC
Q 007311 596 YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ~~~~i~~Fl~~~L 608 (608)
-.+++.+||++.|
T Consensus 222 a~~~~~~ff~~~~ 234 (236)
T COG0412 222 AWQRVLAFFKRLL 234 (236)
T ss_pred HHHHHHHHHHHhc
Confidence 3467777877654
No 124
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.77 E-value=7e-08 Score=110.72 Aligned_cols=107 Identities=25% Similarity=0.310 Sum_probs=78.0
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------------------------c--------cc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------------E--------FE 540 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------------~--------~~ 540 (608)
.+.+|.|+|.||.|+++++.+. + .++++|...+...... + ..
T Consensus 473 ~ri~i~G~SyGGymtl~~~~~~-----~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~ 546 (620)
T COG1506 473 ERIGITGGSYGGYMTLLAATKT-----P-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFY 546 (620)
T ss_pred HHeEEeccChHHHHHHHHHhcC-----c-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhh
Confidence 4558999999999999999842 2 5777766655321110 0 12
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEe-CCCCcCCCChh---hHHHHHHHHHHhC
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEH-DCGHIIPTRSP---YIDEIKSFLQRFL 608 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~-~gGH~ip~~~~---~~~~i~~Fl~~~L 608 (608)
..++++|+|+|||+ +|..+|.+.+.++.+.++..+ ++++++ +.||.+..... ...++.+||++.|
T Consensus 547 ~~~i~~P~LliHG~---~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 547 ADNIKTPLLLIHGE---EDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hcccCCCEEEEeec---CCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 35789999999999 899999999999999998532 455666 55999877432 5678888887754
No 125
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.76 E-value=2e-07 Score=100.95 Aligned_cols=61 Identities=18% Similarity=0.236 Sum_probs=46.0
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeC--CCCcCCCChh--hHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHD--CGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~--gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.+++|+|+|+|+ +|.++|.+.++++.+.++. ...++++.+ .||..+...+ +.+.|.+||.+
T Consensus 321 ~I~~PtLvI~G~---~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCK---QDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeC---CCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 579999999999 8999999999999999863 125555443 6998765432 56677777754
No 126
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.75 E-value=8.9e-08 Score=100.89 Aligned_cols=103 Identities=23% Similarity=0.240 Sum_probs=71.4
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc--------------------------c-------
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA--------------------------E------- 538 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~--------------------------~------- 538 (608)
+...++.|.||||.+++.+|.+ ..++++++..-++..... +
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaL------d~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~ 247 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAAL------DPRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFE 247 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH------SST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHH
T ss_pred cceEEEEeecCchHHHHHHHHh------CccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHH
Confidence 3445799999999999999986 346888888655542210 0
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChhh-HHHHHHHHHH
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSPY-IDEIKSFLQR 606 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~~-~~~i~~Fl~~ 606 (608)
.-..+|++|+++..|- .|+++|+...-.+++.+... .+++.+. .||..+. .. .++..+||.+
T Consensus 248 ~L~Y~D~~nfA~ri~~pvl~~~gl---~D~~cPP~t~fA~yN~i~~~-K~l~vyp~~~He~~~--~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 248 TLSYFDAVNFARRIKCPVLFSVGL---QDPVCPPSTQFAAYNAIPGP-KELVVYPEYGHEYGP--EFQEDKQLNFLKE 319 (320)
T ss_dssp HHHTT-HHHHGGG--SEEEEEEET---T-SSS-HHHHHHHHCC--SS-EEEEEETT--SSTTH--HHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHcCCCEEEEEec---CCCCCCchhHHHHHhccCCC-eeEEeccCcCCCchh--hHHHHHHHHHHhc
Confidence 1246899999999999 89999999999999999865 6666665 5898855 54 7889999976
No 127
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.74 E-value=2.5e-07 Score=95.42 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=75.2
Q ss_pred cHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc------------------
Q 007311 476 GLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA------------------ 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~------------------ 537 (608)
++.+++++|.+... ..+...++|+|+||.+|+.++.. ...++++|+++++.....
T Consensus 84 d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 84 DIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh------CCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 44555554443211 11445799999999999988752 346899999988743110
Q ss_pred ---c----------------------------------------cccCCCCCCEEEEEcCCCCCCcccchHH-----HHH
Q 007311 538 ---E----------------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQA-----SKE 569 (608)
Q Consensus 538 ---~----------------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~-----~~~ 569 (608)
. .....+++|+|+++|. .|...+.-. +.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~---~D~~~~~~~~~~~~~~~ 233 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSG---NDLTAQEFADSVLGEPA 233 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcC---cchhHHHHHHHhccChh
Confidence 0 0112568999999999 898764221 145
Q ss_pred HHHHhccCCcEEEEe-CCCCcCCCChh---hHHHHHHHHHH
Q 007311 570 LAKAFEEGCSVIIEH-DCGHIIPTRSP---YIDEIKSFLQR 606 (608)
Q Consensus 570 l~~~~~~~~~~vv~~-~gGH~ip~~~~---~~~~i~~Fl~~ 606 (608)
+.+.+....++++.+ ++||.+..... ..+.|.+||.+
T Consensus 234 ~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 234 WRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 556554333666666 57998744322 56777888753
No 128
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional
Probab=98.65 E-value=3.9e-08 Score=109.28 Aligned_cols=77 Identities=26% Similarity=0.375 Sum_probs=59.7
Q ss_pred CCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCc
Q 007311 156 DKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFEN 235 (608)
Q Consensus 156 ~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~n 235 (608)
.++.++||||++.||+.|||+|+.+.+++.+. .++...+. +.+++++|++||.+|.||..|+.+|++. ||+|
T Consensus 405 ~~~~~lIDVR~~~E~~~~hI~g~~~~a~niP~---~~l~~~~~---~l~~~~~iivyC~~G~rS~~aa~~L~~~--G~~n 476 (482)
T PRK01269 405 PPDDVIIDIRSPDEQEDKPLKLEGVEVKSLPF---YKLSTQFG---DLDQSKTYLLYCDRGVMSRLQALYLREQ--GFSN 476 (482)
T ss_pred CCCCEEEECCCHHHHhcCCCCCCCceEEECCH---HHHHHHHh---hcCCCCeEEEECCCCHHHHHHHHHHHHc--CCcc
Confidence 45789999999999999999984333444442 23333322 2468899999999999999999999987 9999
Q ss_pred EEEcC
Q 007311 236 VFQLY 240 (608)
Q Consensus 236 V~~L~ 240 (608)
|+...
T Consensus 477 v~~y~ 481 (482)
T PRK01269 477 VKVYR 481 (482)
T ss_pred EEecC
Confidence 98765
No 129
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.65 E-value=6.1e-07 Score=86.81 Aligned_cols=120 Identities=22% Similarity=0.295 Sum_probs=80.1
Q ss_pred CCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----
Q 007311 464 PFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----- 538 (608)
Q Consensus 464 ~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----- 538 (608)
.|++-.|-...+++...++++.. .....++|+|||-||-+++.+|..++. ++-+|-|||......-
T Consensus 79 sf~~Gn~~~eadDL~sV~q~~s~---~nr~v~vi~gHSkGg~Vvl~ya~K~~d------~~~viNcsGRydl~~~I~eRl 149 (269)
T KOG4667|consen 79 SFYYGNYNTEADDLHSVIQYFSN---SNRVVPVILGHSKGGDVVLLYASKYHD------IRNVINCSGRYDLKNGINERL 149 (269)
T ss_pred ccccCcccchHHHHHHHHHHhcc---CceEEEEEEeecCccHHHHHHHHhhcC------chheEEcccccchhcchhhhh
Confidence 34444443333444444444433 123455799999999999999997753 4446666665533210
Q ss_pred -----------------------------------------c--ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 539 -----------------------------------------F--EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 539 -----------------------------------------~--~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
. ..-...||||-+||. .|.+||.+.+.++++.++
T Consensus 150 g~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs---~D~IVPve~AkefAk~i~ 226 (269)
T KOG4667|consen 150 GEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGS---EDEIVPVEDAKEFAKIIP 226 (269)
T ss_pred cccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEecc---CCceeechhHHHHHHhcc
Confidence 1 123457999999999 899999999999999999
Q ss_pred cCCcEEEEeCCCCcCCCChhh
Q 007311 576 EGCSVIIEHDCGHIIPTRSPY 596 (608)
Q Consensus 576 ~~~~~vv~~~gGH~ip~~~~~ 596 (608)
+. ..-+..++.|.+-..+..
T Consensus 227 nH-~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 227 NH-KLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred CC-ceEEecCCCcCccchhhh
Confidence 84 555566778987654443
No 130
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.65 E-value=3.1e-07 Score=98.07 Aligned_cols=61 Identities=26% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC-----hhhHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR-----SPYIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~-----~~~~~~i~~Fl~~ 606 (608)
.+++|+|+++|+ +|.++|.+.++++.+.+.....+++.+++||.-+.. .+...+|.+||.+
T Consensus 284 ~i~~Pvliv~G~---~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAE---RDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecC---CCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 578999999999 899999999999999987655677777899985332 2356888888875
No 131
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.62 E-value=3.4e-08 Score=94.38 Aligned_cols=172 Identities=20% Similarity=0.238 Sum_probs=112.0
Q ss_pred cEEEEecCCCC-ChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 373 LRILCLHGFRQ-NASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 373 ~~iLlLHG~G~-na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+.||++.|.-+ ...+|-.|+.+|-+.|+ +.+|..|.| |.-+ .| +.+.
T Consensus 43 ~~iLlipGalGs~~tDf~pql~~l~k~l~--~TivawDPpGYG~S----------------rP----P~Rk--------- 91 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDFPPQLLSLFKPLQ--VTIVAWDPPGYGTS----------------RP----PERK--------- 91 (277)
T ss_pred ceeEecccccccccccCCHHHHhcCCCCc--eEEEEECCCCCCCC----------------CC----Cccc---------
Confidence 46899999754 45789988888877665 789999977 1000 00 0000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
|. .+-+.+-.++-..+++.. .+...|+|+|-||..|+.+|++ ++..+..+|++
T Consensus 92 --------------f~-------~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak-----~~e~v~rmiiw 145 (277)
T KOG2984|consen 92 --------------FE-------VQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAK-----GKEKVNRMIIW 145 (277)
T ss_pred --------------ch-------HHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeecc-----Chhhhhhheee
Confidence 10 111222223333334332 2444899999999999999984 45566666666
Q ss_pred cCCCCCccc-------------------------------------------------------cccCCCCCCEEEEEcC
Q 007311 530 SGFALHSAE-------------------------------------------------------FEHRSINCPSLHIFGG 554 (608)
Q Consensus 530 sG~~~~~~~-------------------------------------------------------~~~~~i~~PvL~i~G~ 554 (608)
++..-...+ ....+++||+|++||.
T Consensus 146 ga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~ 225 (277)
T KOG2984|consen 146 GAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGG 225 (277)
T ss_pred cccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCC
Confidence 655432211 2467899999999999
Q ss_pred CCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCC--hhhHHHHHHHHHH
Q 007311 555 DLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTR--SPYIDEIKSFLQR 606 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~--~~~~~~i~~Fl~~ 606 (608)
.|+.++....--+....+. +++.+|. |+|-+..+ .++...+.+||++
T Consensus 226 ---kDp~~~~~hv~fi~~~~~~--a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 226 ---KDPFCGDPHVCFIPVLKSL--AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred ---cCCCCCCCCccchhhhccc--ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 8999998877777777665 6666664 68976554 3467788888864
No 132
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.62 E-value=1.1e-06 Score=90.75 Aligned_cols=61 Identities=26% Similarity=0.434 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCcCCCChh--hHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHIIPTRSP--YIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~ip~~~~--~~~~i~~Fl~~~ 607 (608)
.....|||.++|. ++..|+.+.-.++...|+. +++.+.+ +||++..+.| .++.|.+|+.+.
T Consensus 250 ~~~~~pvlfi~g~---~S~fv~~~~~~~~~~~fp~--~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 250 GPYTGPVLFIKGL---QSKFVPDEHYPRMEKIFPN--VEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccccceeEEecC---CCCCcChhHHHHHHHhccc--hheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 4567899999999 8999999999999999988 7777777 9999988755 688888888653
No 133
>PRK10162 acetyl esterase; Provisional
Probab=98.60 E-value=2.6e-06 Score=89.87 Aligned_cols=178 Identities=16% Similarity=0.053 Sum_probs=112.9
Q ss_pred ccEEEEecCCC---CChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 372 KLRILCLHGFR---QNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 372 ~~~iLlLHG~G---~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
.+.||++||-| ++.+.|...+..|++. .++.++.+|.+ +. + ... ++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~--~g~~Vv~vdYr--la----p--------------------e~~-~p-- 129 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASY--SGCTVIGIDYT--LS----P--------------------EAR-FP-- 129 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHH--cCCEEEEecCC--CC----C--------------------CCC-CC--
Confidence 46899999966 6666776445555543 26889999865 21 0 000 01
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhC-CCCcc
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKG-EIDFR 524 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~-~~~l~ 524 (608)
...++..++++++.+..++.+ ...+|+|+|+||.+|+.++.+..+... ...++
T Consensus 130 -----------------------~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~ 186 (318)
T PRK10162 130 -----------------------QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVA 186 (318)
T ss_pred -----------------------CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChh
Confidence 123456667778776655543 356899999999999999986543211 25688
Q ss_pred EEEEecCCCCCccc-------------------------------ccc-------C---CCCCCEEEEEcCCCCCCcccc
Q 007311 525 FAILCSGFALHSAE-------------------------------FEH-------R---SINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 525 ~vIlisG~~~~~~~-------------------------------~~~-------~---~i~~PvL~i~G~~~~~D~~Vp 563 (608)
++|+++++...... ... . ..-.|+++++|+ .|+..+
T Consensus 187 ~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~---~D~L~d 263 (318)
T PRK10162 187 GVLLWYGLYGLRDSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAE---FDPLLD 263 (318)
T ss_pred heEEECCccCCCCChhHHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecC---CCcCcC
Confidence 89998876432100 000 0 112599999999 898864
Q ss_pred hHHHHHHHHHhccC--CcEEEEeCC-CCcCCCC-------hhhHHHHHHHHHHhC
Q 007311 564 NQASKELAKAFEEG--CSVIIEHDC-GHIIPTR-------SPYIDEIKSFLQRFL 608 (608)
Q Consensus 564 ~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~-------~~~~~~i~~Fl~~~L 608 (608)
.++.+++.+... .++++++++ .|.+... ...++.+.+||++.|
T Consensus 264 --e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 264 --DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred --hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 678888888754 356667766 7975322 234677778887653
No 134
>PLN02872 triacylglycerol lipase
Probab=98.59 E-value=2e-07 Score=101.02 Aligned_cols=62 Identities=16% Similarity=0.287 Sum_probs=45.9
Q ss_pred CCC--CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCc--C-CCC--hhhHHHHHHHHHHh
Q 007311 542 RSI--NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHI--I-PTR--SPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i--~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~--i-p~~--~~~~~~i~~Fl~~~ 607 (608)
.++ ++|+++++|+ +|..++++.++++.+.+... ..++.. +.||. + ..+ +...+.|.+||++.
T Consensus 320 ~~i~~~~Pv~i~~G~---~D~lv~~~dv~~l~~~Lp~~-~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 320 SLIPKSLPLWMGYGG---TDGLADVTDVEHTLAELPSK-PELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccCCCCccEEEEEcC---CCCCCCHHHHHHHHHHCCCc-cEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 355 5799999999 89999999999999988764 344444 45995 3 222 23578999999764
No 135
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.56 E-value=1.1e-06 Score=106.47 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=49.0
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC-----ChhhHHHHHHHHHHh
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT-----RSPYIDEIKSFLQRF 607 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~-----~~~~~~~i~~Fl~~~ 607 (608)
...|++|+|+|+|+ +|+++|++.++.+.+.+.+.....+..++||.-.. .++....|.+||+++
T Consensus 293 L~~i~~P~L~i~G~---~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 293 LADITCPVLAFVGE---VDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hhhCCCCEEEEEeC---CCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 35788999999999 89999999999999998764333566788998321 124567888998753
No 136
>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.53 E-value=1.3e-07 Score=97.20 Aligned_cols=112 Identities=14% Similarity=0.264 Sum_probs=77.7
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhh--hcC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAE--QLQ 205 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~--~~k 205 (608)
.-++|||++++.+|+... .+.....+|||+|-+|||.-|||+| ++|......-... .+.+... ..+
T Consensus 154 ~~k~Is~etl~~ll~~~~-------~~~~~~~~iiDcR~pyEY~GGHIkg----avnl~~~~~~~~~-f~~~~~~~~~~~ 221 (325)
T KOG3772|consen 154 DLKYISPETLKGLLQGKF-------SDFFDKFIIIDCRYPYEYEGGHIKG----AVNLYSKELLQDF-FLLKDGVPSGSK 221 (325)
T ss_pred cccccCHHHHHHHHHhcc-------ccceeeEEEEEeCCcccccCccccc----ceecccHhhhhhh-hccccccccccC
Confidence 357999999999998641 1122337899999999999999999 5555322211100 0111111 124
Q ss_pred CCeEEEEcC-CCccHHHHHHHHHhc----------CCCCCcEEEcCccHHHHHHhCC
Q 007311 206 GKHVLMYCT-GGIRCEMASAYVRSK----------GAGFENVFQLYGGIQRYLEQFP 251 (608)
Q Consensus 206 ~k~Iv~yCt-gGiR~~~a~~~L~~~----------~~Gf~nV~~L~GGi~~w~~~~~ 251 (608)
...+|+||+ +-.|.-++|.+|++- -.-|.++|.|+||+.+|...++
T Consensus 222 ~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~~~~ 278 (325)
T KOG3772|consen 222 RVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFSNYP 278 (325)
T ss_pred ceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHHhcc
Confidence 567899997 568999999999951 1246789999999999998876
No 137
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.53 E-value=6.1e-07 Score=86.79 Aligned_cols=179 Identities=17% Similarity=0.109 Sum_probs=118.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
..+|++|.||+..+|--.+..-...+-.+|+ ..+..++.. .+..+..
T Consensus 76 ~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~--mnv~ivsYR-------------------------------GYG~S~G 122 (300)
T KOG4391|consen 76 SSRPTLLYFHANAGNMGHRLPIARVFYVNLK--MNVLIVSYR-------------------------------GYGKSEG 122 (300)
T ss_pred CCCceEEEEccCCCcccchhhHHHHHHHHcC--ceEEEEEee-------------------------------ccccCCC
Confidence 4678999999999998877755555556654 455555433 1111000
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
+-.. ....-+-+.++++|...-.-.....+++|-|.||++|..+|... ..++.++|+-
T Consensus 123 --------------spsE---~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~-----~~ri~~~ivE 180 (300)
T KOG4391|consen 123 --------------SPSE---EGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN-----SDRISAIIVE 180 (300)
T ss_pred --------------Cccc---cceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccc-----hhheeeeeee
Confidence 0000 00112345566666544333334457999999999999999854 4467788886
Q ss_pred cCCCCCccc-------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe
Q 007311 530 SGFALHSAE-------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH 584 (608)
Q Consensus 530 sG~~~~~~~-------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~ 584 (608)
..|...... ....+.++|+|.+-|. +|.+||+-+.++|++.+......+.++
T Consensus 181 NTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGl---kDelVPP~~Mr~Ly~~c~S~~Krl~eF 257 (300)
T KOG4391|consen 181 NTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGL---KDELVPPVMMRQLYELCPSRTKRLAEF 257 (300)
T ss_pred chhccchhhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecC---ccccCCcHHHHHHHHhCchhhhhheeC
Confidence 666543110 2345778999999999 899999999999999999776778888
Q ss_pred CCC-CcC-CCChhhHHHHHHHHHH
Q 007311 585 DCG-HII-PTRSPYIDEIKSFLQR 606 (608)
Q Consensus 585 ~gG-H~i-p~~~~~~~~i~~Fl~~ 606 (608)
+.| |-- -.-..|.+.|.+||.+
T Consensus 258 P~gtHNDT~i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 258 PDGTHNDTWICDGYFQAIEDFLAE 281 (300)
T ss_pred CCCccCceEEeccHHHHHHHHHHH
Confidence 764 531 0113699999999976
No 138
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.46 E-value=4.8e-07 Score=92.92 Aligned_cols=102 Identities=20% Similarity=0.224 Sum_probs=76.5
Q ss_pred cccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc----------cccCCCCccccCcccccCC------Cc
Q 007311 130 RHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI----------GKFRTPSVETLDPEIRQFS------DL 193 (608)
Q Consensus 130 ~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~----------Gh~~g~~~~~l~~~~~~~~------~~ 193 (608)
...+..++...++. +..+|||+|++.||.- ||||| ++|.+-..+. ..
T Consensus 156 ~~~~~~~~~~~~~~-------------~~~~liDaR~~~rf~G~~~ep~~~~~GHIPG----AiNipw~~~~~~~~~~~~ 218 (285)
T COG2897 156 AVVDATLVADALEV-------------PAVLLIDARSPERFRGKEPEPRDGKAGHIPG----AINIPWTDLVDDGGLFKS 218 (285)
T ss_pred ccCCHHHHHHHhcC-------------CCeEEEecCCHHHhCCCCCCCCCCCCCCCCC----CcCcCHHHHhcCCCccCc
Confidence 45567777777765 5788999999999998 99999 4554422221 12
Q ss_pred hHHHHh---hhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC
Q 007311 194 PTWIDN---NAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLEQF 250 (608)
Q Consensus 194 ~~~~~~---~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~ 250 (608)
++.+.. .....++|+||+||.+|.|+....-.|+.. |+.++....|+...|....
T Consensus 219 ~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~l--g~~~~~lYdGSWsEWg~~~ 276 (285)
T COG2897 219 PEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAEL--GGPNNRLYDGSWSEWGSDP 276 (285)
T ss_pred HHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHh--CCCCcccccChHHHhhcCC
Confidence 223322 233578999999999999999998889887 7777888999999998753
No 139
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.43 E-value=3e-06 Score=87.47 Aligned_cols=65 Identities=20% Similarity=0.318 Sum_probs=44.1
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCc--CCCC--hh---hHHHHHHHHHHhC
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHI--IPTR--SP---YIDEIKSFLQRFL 608 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~--ip~~--~~---~~~~i~~Fl~~~L 608 (608)
....|++|+|+||.. +|++++.+............ +.+... -|||. +-.. .+ -.+.+.+||..++
T Consensus 269 ~L~~Ir~PtLii~A~---DDP~~~~~~iP~~~~~~np~-v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 269 LLPKIRKPTLIINAK---DDPFMPPEVIPKLQEMLNPN-VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred cccccccceEEEecC---CCCCCChhhCCcchhcCCCc-eEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 356899999999999 99999987777666643333 555544 57996 2211 12 2467888887653
No 140
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.38 E-value=6.4e-06 Score=92.21 Aligned_cols=47 Identities=17% Similarity=0.161 Sum_probs=39.0
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCC
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIP 591 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip 591 (608)
...|++|+|+++|+ +|.++|.+.+..+.+.+... ..++..++||...
T Consensus 411 L~~I~vPvLvV~G~---~D~IvP~~sa~~l~~~i~~~-~~~vL~~sGHi~~ 457 (532)
T TIGR01838 411 LSKVKVPVYIIATR---EDHIAPWQSAYRGAALLGGP-KTFVLGESGHIAG 457 (532)
T ss_pred hhhCCCCEEEEeeC---CCCcCCHHHHHHHHHHCCCC-EEEEECCCCCchH
Confidence 45789999999999 89999999999999998853 5555567899854
No 141
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.34 E-value=1.1e-05 Score=86.07 Aligned_cols=183 Identities=17% Similarity=0.223 Sum_probs=109.3
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+|++|+|||.-++.+. .-+..|.... ..++++|.++..= + . .....+| +-|.
T Consensus 123 ~~~P~vvilpGltg~S~~--~YVr~lv~~a~~~G~r~VVfN~RG-~-------~----g~~LtTp---------r~f~-- 177 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHE--SYVRHLVHEAQRKGYRVVVFNHRG-L-------G----GSKLTTP---------RLFT-- 177 (409)
T ss_pred CCCcEEEEecCCCCCChh--HHHHHHHHHHHhCCcEEEEECCCC-C-------C----CCccCCC---------ceee--
Confidence 456899999999777754 2333554444 4689999988661 0 0 0000000 1111
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
..-++++.++++++++..-+. ....+||||||+|.+.+..+-.. ..+-.+++.+
T Consensus 178 ----------------------ag~t~Dl~~~v~~i~~~~P~a--~l~avG~S~Gg~iL~nYLGE~g~--~~~l~~a~~v 231 (409)
T KOG1838|consen 178 ----------------------AGWTEDLREVVNHIKKRYPQA--PLFAVGFSMGGNILTNYLGEEGD--NTPLIAAVAV 231 (409)
T ss_pred ----------------------cCCHHHHHHHHHHHHHhCCCC--ceEEEEecchHHHHHHHhhhccC--CCCceeEEEE
Confidence 012567777777776553222 23688999999999998875431 1223455555
Q ss_pred ecCCCCCccc----------------------------------------------------------------------
Q 007311 529 CSGFALHSAE---------------------------------------------------------------------- 538 (608)
Q Consensus 529 isG~~~~~~~---------------------------------------------------------------------- 538 (608)
+++|-.....
T Consensus 232 ~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~ 311 (409)
T KOG1838|consen 232 CNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKK 311 (409)
T ss_pred eccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhh
Confidence 6676543110
Q ss_pred ----cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEEeCCCCc------CCCChhhHHH-HHHHHHH
Q 007311 539 ----FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIEHDCGHI------IPTRSPYIDE-IKSFLQR 606 (608)
Q Consensus 539 ----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~~~gGH~------ip~~~~~~~~-i~~Fl~~ 606 (608)
.....|++|+|.|... +|+++|.... -..+...+. ...++...|||. .|...-.+++ +++|+..
T Consensus 312 aSs~~~v~~I~VP~L~ina~---DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 312 ASSSNYVDKIKVPLLCINAA---DDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred cchhhhcccccccEEEEecC---CCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 2356899999999999 8999986422 222333332 244555668996 3333346777 8899876
Q ss_pred h
Q 007311 607 F 607 (608)
Q Consensus 607 ~ 607 (608)
+
T Consensus 388 ~ 388 (409)
T KOG1838|consen 388 A 388 (409)
T ss_pred H
Confidence 5
No 142
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.33 E-value=3.2e-06 Score=86.77 Aligned_cols=110 Identities=14% Similarity=0.147 Sum_probs=64.3
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+++||++||+|.+...+......+++.|. .++.++.+|.|- .. +..
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G--------~G-----------------------~S~-- 71 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYG--------CG-----------------------DSA-- 71 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCC--------CC-----------------------CCC--
Confidence 57899999999864433322335666665 579999999881 10 000
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS 530 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis 530 (608)
+.+....+....+++..++++|.+. ......|+||||||.+|+.++.+. +..++++|+++
T Consensus 72 ------------g~~~~~~~~~~~~Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~-----p~~v~~lVL~~ 131 (266)
T TIGR03101 72 ------------GDFAAARWDVWKEDVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAANPL-----AAKCNRLVLWQ 131 (266)
T ss_pred ------------CccccCCHHHHHHHHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHHHhC-----ccccceEEEec
Confidence 0000000001122333344444321 123458999999999999998743 45688899988
Q ss_pred CCCC
Q 007311 531 GFAL 534 (608)
Q Consensus 531 G~~~ 534 (608)
+...
T Consensus 132 P~~~ 135 (266)
T TIGR03101 132 PVVS 135 (266)
T ss_pred cccc
Confidence 7554
No 143
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.32 E-value=1.2e-05 Score=82.03 Aligned_cols=130 Identities=15% Similarity=0.085 Sum_probs=84.5
Q ss_pred ccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------
Q 007311 475 DGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------- 538 (608)
.++..-..||..+|... ....-++||||||..++.++........-+.+..+|.|+|.......
T Consensus 80 ~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~ 159 (255)
T PF06028_consen 80 ANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLN 159 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhc
Confidence 45666677777776653 24446999999999999888865432223578999999876532210
Q ss_pred ----------------c--ccCCCCCCEEEEEcC---CCCCCcccchHHHHHHHHHhccCCc---EEEEeC--CCCc-CC
Q 007311 539 ----------------F--EHRSINCPSLHIFGG---DLGNDRQVANQASKELAKAFEEGCS---VIIEHD--CGHI-IP 591 (608)
Q Consensus 539 ----------------~--~~~~i~~PvL~i~G~---~~~~D~~Vp~~~~~~l~~~~~~~~~---~vv~~~--gGH~-ip 591 (608)
. ..-.-.+.+|-|+|. .+..|..||...+..++-++..... +.++.+ +.|. .+
T Consensus 160 ~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~Lh 239 (255)
T PF06028_consen 160 KNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLH 239 (255)
T ss_dssp TT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGG
T ss_pred ccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCC
Confidence 0 122345779999996 2346999999999999999986322 222222 3675 56
Q ss_pred CChhhHHHHHHHH
Q 007311 592 TRSPYIDEIKSFL 604 (608)
Q Consensus 592 ~~~~~~~~i~~Fl 604 (608)
..+...+.|.+||
T Consensus 240 eN~~V~~~I~~FL 252 (255)
T PF06028_consen 240 ENPQVDKLIIQFL 252 (255)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 6566777788877
No 144
>PRK04940 hypothetical protein; Provisional
Probab=98.30 E-value=1.6e-05 Score=76.30 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhH--h-C--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------
Q 007311 479 VSLAYLKTIFSQ--E-G--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--------------- 538 (608)
Q Consensus 479 ~s~~~L~~~i~~--~-~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--------------- 538 (608)
++++.|.+.+.+ . . ....|+|-|+||.-|.+++.++. ++ +|++++...+...
T Consensus 41 ~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g-------~~-aVLiNPAv~P~~~L~~~ig~~~~y~~~~ 112 (180)
T PRK04940 41 HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG-------IR-QVIFNPNLFPEENMEGKIDRPEEYADIA 112 (180)
T ss_pred HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC-------CC-EEEECCCCChHHHHHHHhCCCcchhhhh
Confidence 345555555543 1 1 23589999999999999999653 43 4555554433211
Q ss_pred ----cccCCCCCC--EEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 ----FEHRSINCP--SLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 ----~~~~~i~~P--vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.+. +++-| .+++..+ .|.+++...+.+ .+...-..++..+|.|.+...++++..|.+|+.
T Consensus 113 ~~h~~eL-~~~~p~r~~vllq~---gDEvLDyr~a~~---~y~~~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 113 TKCVTNF-REKNRDRCLVILSR---NDEVLDSQRTAE---ELHPYYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred HHHHHHh-hhcCcccEEEEEeC---CCcccCHHHHHH---HhccCceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 011 13445 4888998 799998665554 334321233444567989888889999999985
No 145
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.28 E-value=4.1e-05 Score=72.39 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=81.5
Q ss_pred HHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------cccCCCCCCEEEE
Q 007311 483 YLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-----------FEHRSINCPSLHI 551 (608)
Q Consensus 483 ~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-----------~~~~~i~~PvL~i 551 (608)
.|.+.+.......+|++||.|+.+++.++.+.+ .+++|+++++++-.-... ....++.-|++++
T Consensus 49 ~l~~~v~a~~~~~vlVAHSLGc~~v~h~~~~~~-----~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vv 123 (181)
T COG3545 49 RLEKEVNAAEGPVVLVAHSLGCATVAHWAEHIQ-----RQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVV 123 (181)
T ss_pred HHHHHHhccCCCeEEEEecccHHHHHHHHHhhh-----hccceEEEecCCCccccccchhhccccCCCccccCCCceeEE
Confidence 344444443222489999999999999998664 389999999988654321 1245677899999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC-----ChhhHHHHHHHHHH
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT-----RSPYIDEIKSFLQR 606 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~-----~~~~~~~i~~Fl~~ 606 (608)
+.. +|++++++.++++++.... ..+..-++||+--. -++-...+.+|+.+
T Consensus 124 aSr---nDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 124 ASR---NDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred Eec---CCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 999 9999999999999999886 55555667887322 23345555555543
No 146
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.26 E-value=4e-06 Score=82.13 Aligned_cols=106 Identities=25% Similarity=0.269 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC-----------C-----Ccc-c
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA-----------L-----HSA-E 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~-----------~-----~~~-~ 538 (608)
.....+.+..+++..+ ....++||||||++++.++.+. +..++.+|++++.. + ... .
T Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (230)
T PF00561_consen 27 TDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQY-----PERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLD 101 (230)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHS-----GGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHC-----chhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHH
Confidence 4444555555555544 3368999999999999999965 45799999999851 0 000 0
Q ss_pred -------------------------------------------------------------------cccCCCCCCEEEE
Q 007311 539 -------------------------------------------------------------------FEHRSINCPSLHI 551 (608)
Q Consensus 539 -------------------------------------------------------------------~~~~~i~~PvL~i 551 (608)
.....+++|+|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i 181 (230)
T PF00561_consen 102 NFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLII 181 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEE
T ss_pred hhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEE
Confidence 1235799999999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCC
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPT 592 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~ 592 (608)
+|+ +|.++|++.+..+.+.++. .+.+..++ ||....
T Consensus 182 ~~~---~D~~~p~~~~~~~~~~~~~--~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 182 WGE---DDPLVPPESSEQLAKLIPN--SQLVLIEGSGHFAFL 218 (230)
T ss_dssp EET---TCSSSHHHHHHHHHHHSTT--EEEEEETTCCSTHHH
T ss_pred EeC---CCCCCCHHHHHHHHHhcCC--CEEEECCCCChHHHh
Confidence 999 8999999999999999987 55555555 998644
No 147
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.21 E-value=2e-05 Score=98.04 Aligned_cols=171 Identities=15% Similarity=0.161 Sum_probs=116.0
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFS 451 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 451 (608)
.+.++|+||+|+++..|. .+.+.|...+.++.++.|.. ....
T Consensus 1068 ~~~l~~lh~~~g~~~~~~----~l~~~l~~~~~v~~~~~~g~-----------------------------~~~~----- 1109 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS----VLSRYLDPQWSIYGIQSPRP-----------------------------DGPM----- 1109 (1296)
T ss_pred CCCeEEecCCCCchHHHH----HHHHhcCCCCcEEEEECCCC-----------------------------CCCC-----
Confidence 356999999999999999 88888888899999887711 0000
Q ss_pred CccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 452 GKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 452 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
.....+++..+.+.+.+.... ....++|||+||.+|..+|.+.+. ....+..++++
T Consensus 1110 --------------------~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~--~~~~v~~l~l~ 1167 (1296)
T PRK10252 1110 --------------------QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRA--RGEEVAFLGLL 1167 (1296)
T ss_pred --------------------CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHH--cCCceeEEEEe
Confidence 012346666666666666532 124799999999999999987652 24567788887
Q ss_pred cCCCCCc------------c----------c-------------------------------cccCCCCCCEEEEEcCCC
Q 007311 530 SGFALHS------------A----------E-------------------------------FEHRSINCPSLHIFGGDL 556 (608)
Q Consensus 530 sG~~~~~------------~----------~-------------------------------~~~~~i~~PvL~i~G~~~ 556 (608)
.++.+.. . . .....+..|++++.|.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1245 (1296)
T PRK10252 1168 DTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAE-- 1245 (1296)
T ss_pred cCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcC--
Confidence 7654311 0 0 0123566899999998
Q ss_pred CCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHHHh
Q 007311 557 GNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 557 ~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.|..........+.+.. . ...+...++||.....++.+..+.+.|.+.
T Consensus 1246 -~~~~~~~~~~~~W~~~~-~-~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1246 -RTLQEGMSPEQAWSPWI-A-ELDVYRQDCAHVDIISPEAFEKIGPILRAT 1293 (1296)
T ss_pred -CCCcccCCcccchhhhc-C-CCEEEECCCCHHHHCCcHHHHHHHHHHHHH
Confidence 56544444445566665 3 367777899998766666778888777654
No 148
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.20 E-value=1.2e-05 Score=80.91 Aligned_cols=105 Identities=21% Similarity=0.158 Sum_probs=63.0
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccC--CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKN--IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~--~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
++..|.++++||.|.++-.|. .+++.|.. ..+++.+|+. ++. . .=+.
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA----~~a~el~s~~~~r~~a~DlR--------gHG-e------------------Tk~~ 119 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFA----IFASELKSKIRCRCLALDLR--------GHG-E------------------TKVE 119 (343)
T ss_pred CCCccEEEEeecCcccchhHH----HHHHHHHhhcceeEEEeecc--------ccC-c------------------cccC
Confidence 345678999999999999999 55555543 4567778876 211 0 0000
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
..+ .++ ...-..+....+.+...+..+.+.|+||||||++|...|.... -+.+.|+
T Consensus 120 -------------~e~-dlS------~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~----lpsl~Gl 175 (343)
T KOG2564|consen 120 -------------NED-DLS------LETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKT----LPSLAGL 175 (343)
T ss_pred -------------Chh-hcC------HHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhh----chhhhce
Confidence 000 011 1112233344455555556677789999999999988887533 2235555
Q ss_pred EE
Q 007311 527 IL 528 (608)
Q Consensus 527 Il 528 (608)
+.
T Consensus 176 ~v 177 (343)
T KOG2564|consen 176 VV 177 (343)
T ss_pred EE
Confidence 55
No 149
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.20 E-value=1.9e-05 Score=84.86 Aligned_cols=172 Identities=17% Similarity=0.169 Sum_probs=97.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHH-HHHc-cCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASL-AKKL-KNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L-~~~L-~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.+.|+||+.-|.-+-.+++. .+ .+.| +.++.++.+|.|-. + ...+|..
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~----~l~~~~l~~rGiA~LtvDmPG~-----------G--------------~s~~~~l- 237 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLY----RLFRDYLAPRGIAMLTVDMPGQ-----------G--------------ESPKWPL- 237 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGH----HHHHCCCHHCT-EEEEE--TTS-----------G--------------GGTTT-S-
T ss_pred CCCCEEEEeCCcchhHHHHH----HHHHHHHHhCCCEEEEEccCCC-----------c--------------ccccCCC-
Confidence 55689999999999998876 43 3344 36899999999910 0 0012311
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC----ceEEEecChhHHHHHHHHHHHhhhhCCCCc
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP----FDGILGFSQGAAMAASVCAQWERLKGEIDF 523 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~----~~~IlGFSQGa~vAl~la~~~~~~~~~~~l 523 (608)
+++.+...+.+.+.+..... .++++|+|+||.+|..+|... +.++
T Consensus 238 --------------------------~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----~~Rl 286 (411)
T PF06500_consen 238 --------------------------TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----DPRL 286 (411)
T ss_dssp ---------------------------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----TTT-
T ss_pred --------------------------CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----ccce
Confidence 01112344445555555443 346899999999999999743 5689
Q ss_pred cEEEEecCCCCCcc-c---------------------------------------c--c--cCCCCCCEEEEEcCCCCCC
Q 007311 524 RFAILCSGFALHSA-E---------------------------------------F--E--HRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 524 ~~vIlisG~~~~~~-~---------------------------------------~--~--~~~i~~PvL~i~G~~~~~D 559 (608)
+++|.+++...... + . - ..+.++|+|.+.|+ +|
T Consensus 287 kavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~---~D 363 (411)
T PF06500_consen 287 KAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGE---DD 363 (411)
T ss_dssp SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEET---T-
T ss_pred eeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecC---CC
Confidence 99999988643321 0 0 1 25678999999999 89
Q ss_pred cccchHHHHHHHHHhccCCcEEEEeCCC-CcCCCChhhHHHHHHHHHHhC
Q 007311 560 RQVANQASKELAKAFEEGCSVIIEHDCG-HIIPTRSPYIDEIKSFLQRFL 608 (608)
Q Consensus 560 ~~Vp~~~~~~l~~~~~~~~~~vv~~~gG-H~ip~~~~~~~~i~~Fl~~~L 608 (608)
++.|.+..+-++..-.++ .......+. |.- -+.-+..+.+||++.|
T Consensus 364 ~v~P~eD~~lia~~s~~g-k~~~~~~~~~~~g--y~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 364 PVSPIEDSRLIAESSTDG-KALRIPSKPLHMG--YPQALDEIYKWLEDKL 410 (411)
T ss_dssp SSS-HHHHHHHHHTBTT--EEEEE-SSSHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCC-ceeecCCCccccc--hHHHHHHHHHHHHHhc
Confidence 999988877766554432 333333333 431 1235788899998754
No 150
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.17 E-value=1.2e-05 Score=80.51 Aligned_cols=118 Identities=17% Similarity=0.063 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
.-.+++.|..+-..+..++++-|.||||++|+..+.+-+ +++.+++.-+++.....
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~------rik~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k 233 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP------RIKAVVADYPFLSDFPRAIELATEGPYDEIQTYFK 233 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh------hhhcccccccccccchhheeecccCcHHHHHHHHH
Confidence 333333333333334456689999999999999888643 34445444444322110
Q ss_pred -------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-CCCc-CCCChhhH
Q 007311 539 -------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-CGHI-IPTRSPYI 597 (608)
Q Consensus 539 -------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-gGH~-ip~~~~~~ 597 (608)
....+++.|+|+..|- -|+++|+...-..++.+... .++.++. -+|+ +|. -..
T Consensus 234 ~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL---~D~vcpPstqFA~yN~l~~~-K~i~iy~~~aHe~~p~--~~~ 307 (321)
T COG3458 234 RHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGL---MDPVCPPSTQFAAYNALTTS-KTIEIYPYFAHEGGPG--FQS 307 (321)
T ss_pred hcCchHHHHHHHHhhhhhhhHHHhhccceEEeecc---cCCCCCChhhHHHhhcccCC-ceEEEeeccccccCcc--hhH
Confidence 1246899999999999 99999999999999999865 4443332 2587 444 345
Q ss_pred HHHHHHHHH
Q 007311 598 DEIKSFLQR 606 (608)
Q Consensus 598 ~~i~~Fl~~ 606 (608)
++++.|++.
T Consensus 308 ~~~~~~l~~ 316 (321)
T COG3458 308 RQQVHFLKI 316 (321)
T ss_pred HHHHHHHHh
Confidence 668888865
No 151
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.17 E-value=0.0001 Score=74.90 Aligned_cols=142 Identities=19% Similarity=0.242 Sum_probs=97.9
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
...-|+|-+||--+|..+|+ -++..|. .+.|+|-++.| ++..-+.
T Consensus 33 s~~gTVv~~hGsPGSH~DFk----Yi~~~l~~~~iR~I~iN~P-----------------------------Gf~~t~~- 78 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDFK----YIRPPLDEAGIRFIGINYP-----------------------------GFGFTPG- 78 (297)
T ss_pred CCceeEEEecCCCCCccchh----hhhhHHHHcCeEEEEeCCC-----------------------------CCCCCCC-
Confidence 33458999999999999999 6666665 48999999988 1111110
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
+..+...-.+-..++.+++++.+ ..+.++|||.|+-.|+.++..+ +..++
T Consensus 79 ---------------------~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~-------~~~g~ 130 (297)
T PF06342_consen 79 ---------------------YPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTH-------PLHGL 130 (297)
T ss_pred ---------------------CcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcC-------ccceE
Confidence 00112233456677778887754 4557899999999999999843 46688
Q ss_pred EEecCCC--CCccc-------------------------------------------------------------cccCC
Q 007311 527 ILCSGFA--LHSAE-------------------------------------------------------------FEHRS 543 (608)
Q Consensus 527 IlisG~~--~~~~~-------------------------------------------------------------~~~~~ 543 (608)
+++++.. +.... .....
T Consensus 131 ~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~ 210 (297)
T PF06342_consen 131 VLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNK 210 (297)
T ss_pred EEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhcc
Confidence 8887553 22110 12234
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
-++|+|+++|. +|..|-.+.+.+.+..+..
T Consensus 211 ~~ikvli~ygg---~DhLIEeeI~~E~a~~f~~ 240 (297)
T PF06342_consen 211 KPIKVLIAYGG---KDHLIEEEISFEFAMKFKG 240 (297)
T ss_pred CCCcEEEEEcC---cchhhHHHHHHHHHHHhCC
Confidence 45999999999 8999888877777666653
No 152
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.13 E-value=0.00013 Score=70.92 Aligned_cols=51 Identities=25% Similarity=0.462 Sum_probs=34.2
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP 595 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~ 595 (608)
..+.+|+++++|. +|.+.|........+........++..++||......+
T Consensus 218 ~~~~~P~l~i~g~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p 268 (282)
T COG0596 218 ARITVPTLIIHGE---DDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAP 268 (282)
T ss_pred ccCCCCeEEEecC---CCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcH
Confidence 3567999999999 78777766555555555532234455567999877543
No 153
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.13 E-value=5.7e-06 Score=83.64 Aligned_cols=92 Identities=12% Similarity=0.115 Sum_probs=69.6
Q ss_pred cHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEE
Q 007311 476 GLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHI 551 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i 551 (608)
.+.+.++.+.+++... ..+..++|+|+||..++.++.++ +.-|.+++.++|...... .....-++|+-++
T Consensus 248 ~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf-----PdfFAaa~~iaG~~d~v~-lv~~lk~~piWvf 321 (387)
T COG4099 248 YLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF-----PDFFAAAVPIAGGGDRVY-LVRTLKKAPIWVF 321 (387)
T ss_pred hHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC-----chhhheeeeecCCCchhh-hhhhhccCceEEE
Confidence 3556666666666654 34556999999999999999855 556899999998765221 1234557899999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhcc
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
|+. +|.++|.+.++-++..++.
T Consensus 322 hs~---dDkv~Pv~nSrv~y~~lk~ 343 (387)
T COG4099 322 HSS---DDKVIPVSNSRVLYERLKA 343 (387)
T ss_pred Eec---CCCccccCcceeehHHHHh
Confidence 999 8999999999988887775
No 154
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.11 E-value=3.5e-05 Score=84.17 Aligned_cols=39 Identities=15% Similarity=-0.022 Sum_probs=31.9
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
....|+|||+||.+|..++... +..++.++++.+..|..
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~-----p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLT-----KHKVNRITGLDPAGPTF 157 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhC-----CcceeEEEEEcCCCCcc
Confidence 3457999999999999988743 46799999999887754
No 155
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.09 E-value=6.8e-05 Score=76.05 Aligned_cols=162 Identities=15% Similarity=0.136 Sum_probs=99.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
...-|.+||+||++-.++.+. .+.+++. .++-+|.+|--. +. + .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys----~ll~hvAShGyIVV~~d~~~-~~----------------------------~-~- 58 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYS----QLLEHVASHGYIVVAPDLYS-IG----------------------------G-P- 58 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHH----HHHHHHHhCceEEEEecccc-cC----------------------------C-C-
Confidence 344689999999997777777 5555555 477777776220 00 0 0
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--------CceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--------PFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--------~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
.-......+.+.++||.+-+...- ...+|.|||+||-+|+.+++.+.....
T Consensus 59 ---------------------~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~ 117 (259)
T PF12740_consen 59 ---------------------DDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL 117 (259)
T ss_pred ---------------------CcchhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhccccc
Confidence 001123456667777666554431 234699999999999999986632222
Q ss_pred CCCccEEEEecCCC---------CCcccc--ccCCCCCCEEEEEcCCCCCCc---------ccch-HHHHHHHHHhccCC
Q 007311 520 EIDFRFAILCSGFA---------LHSAEF--EHRSINCPSLHIFGGDLGNDR---------QVAN-QASKELAKAFEEGC 578 (608)
Q Consensus 520 ~~~l~~vIlisG~~---------~~~~~~--~~~~i~~PvL~i~G~~~~~D~---------~Vp~-~~~~~l~~~~~~~~ 578 (608)
...++++|++.+.- |..... ......+|+++| |+. .+. -+|. ...++.++.+....
T Consensus 118 ~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~s~~~~~P~lvi-GtG--Lg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~ 194 (259)
T PF12740_consen 118 DLRFSALILLDPVDGMSKGSQTEPPVLTYTPQSFDFSMPALVI-GTG--LGGEPRNPLFPPCAPAGVNYREFFDECKPPS 194 (259)
T ss_pred ccceeEEEEeccccccccccCCCCccccCcccccCCCCCeEEE-ecc--cCcccccccCCCCCCCCCCHHHHHHhcCCCE
Confidence 45789999987665 111111 223355999777 543 332 2332 34566777777765
Q ss_pred cEEEEeCCCCc
Q 007311 579 SVIIEHDCGHI 589 (608)
Q Consensus 579 ~~vv~~~gGH~ 589 (608)
..++.-+.||.
T Consensus 195 ~~~v~~~~GH~ 205 (259)
T PF12740_consen 195 WHFVAKDYGHM 205 (259)
T ss_pred EEEEeCCCCch
Confidence 66777778997
No 156
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.06 E-value=1.7e-05 Score=80.75 Aligned_cols=118 Identities=17% Similarity=0.135 Sum_probs=69.8
Q ss_pred CccEEEEecCCCCChHHHHHHH--HHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 371 RKLRILCLHGFRQNASSFKGRT--ASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~--~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
.++.+|.|||-+||+......+ ..|++. ..+-|+|||.- ..+. ......|+..
T Consensus 60 ~apLvv~LHG~~~sgag~~~~sg~d~lAd~--~gFlV~yPdg~~~~wn----------------------~~~~~~~~~p 115 (312)
T COG3509 60 GAPLVVVLHGSGGSGAGQLHGTGWDALADR--EGFLVAYPDGYDRAWN----------------------ANGCGNWFGP 115 (312)
T ss_pred CCCEEEEEecCCCChHHhhcccchhhhhcc--cCcEEECcCccccccC----------------------CCcccccCCc
Confidence 3478999999999998877554 344433 46778887532 1110 1123455441
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
.+ +-+. ......+.+.++.|......+..++.|-|+|-||.||..+++. .+..|.++-
T Consensus 116 ~~-------~~~g----------~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~-----~p~~faa~A 173 (312)
T COG3509 116 AD-------RRRG----------VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACE-----YPDIFAAIA 173 (312)
T ss_pred cc-------ccCC----------ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhc-----Cccccccee
Confidence 11 0000 0112223444444333333344566799999999999999994 456678888
Q ss_pred EecCCCC
Q 007311 528 LCSGFAL 534 (608)
Q Consensus 528 lisG~~~ 534 (608)
.++|..+
T Consensus 174 ~VAg~~~ 180 (312)
T COG3509 174 PVAGLLA 180 (312)
T ss_pred eeecccC
Confidence 8888774
No 157
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.01 E-value=1.7e-05 Score=78.88 Aligned_cols=107 Identities=18% Similarity=0.273 Sum_probs=67.1
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------c------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----------E------ 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----------~------ 538 (608)
+-+++++++|.+.-......++|+|.|.||-+|+.+|..+ ..++.+|+++|...... .
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~------~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~ 77 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRF------PQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPF 77 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS------SSEEEEEEES--SB--SSEEEETTE--EE----B
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC------CCccEEEEeCCceeEecchhcccCCCccCCcCCc
Confidence 5588899998877665667779999999999999999964 26888888776542110 0
Q ss_pred -------------------------------cccCCCCCCEEEEEcCCCCCCcccchH-HHHHHHHHhccC----CcEEE
Q 007311 539 -------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQ-ASKELAKAFEEG----CSVII 582 (608)
Q Consensus 539 -------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~-~~~~l~~~~~~~----~~~vv 582 (608)
-...++++|+|+|.|+ +|...|.. .++.+.+.++.. ..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~---dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l 154 (213)
T PF08840_consen 78 DISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGE---DDQIWPSSEMAEQIEERLKAAGFPHNVEHL 154 (213)
T ss_dssp -GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEET---T-SSS-HHHHHHHHHHHHHCTT-----EEE
T ss_pred ChhhceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeC---CCCccchHHHHHHHHHHHHHhCCCCcceEE
Confidence 0134688999999999 89998864 444566666643 24455
Q ss_pred Ee-CCCCcC
Q 007311 583 EH-DCGHII 590 (608)
Q Consensus 583 ~~-~gGH~i 590 (608)
.+ ++||.+
T Consensus 155 ~Y~~aGH~i 163 (213)
T PF08840_consen 155 SYPGAGHLI 163 (213)
T ss_dssp EETTB-S--
T ss_pred EcCCCCcee
Confidence 44 569996
No 158
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.00 E-value=5.6e-05 Score=75.79 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=40.6
Q ss_pred cccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 472 QQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 472 ~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+.+.+.+.++.+.+.... ....+.|+||||||.+|-.++.... .....++.+|.++...
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~--~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN--YDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc--cccccEEEEEEEcCCC
Confidence 3455566777776666622 2344579999999999988876432 1235688999988654
No 159
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=97.99 E-value=4.7e-05 Score=74.57 Aligned_cols=165 Identities=20% Similarity=0.250 Sum_probs=105.2
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDF 450 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 450 (608)
+-.|++.-=||-..++-+ .++.++. .++.++.||-=..=| -.++.+....-.|+...+
T Consensus 40 ~~li~i~DvfG~~~~n~r----~~Adk~A~~Gy~v~vPD~~~Gdp----------------~~~~~~~~~~~~w~~~~~- 98 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTR----EGADKVALNGYTVLVPDFFRGDP----------------WSPSLQKSERPEWMKGHS- 98 (242)
T ss_pred eEEEEEEeeeccccHHHH----HHHHHHhcCCcEEEcchhhcCCC----------------CCCCCChhhhHHHHhcCC-
Confidence 334455555666665555 6677776 578888887331100 001112223445665221
Q ss_pred CCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEE
Q 007311 451 SGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAIL 528 (608)
Q Consensus 451 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIl 528 (608)
+ ......+...+++|+ ..+ -..|+.||.+||.++..+.... ..+.++++
T Consensus 99 ----------------~---~~~~~~i~~v~k~lk----~~g~~kkIGv~GfCwGak~vv~~~~~~------~~f~a~v~ 149 (242)
T KOG3043|consen 99 ----------------P---PKIWKDITAVVKWLK----NHGDSKKIGVVGFCWGAKVVVTLSAKD------PEFDAGVS 149 (242)
T ss_pred ----------------c---ccchhHHHHHHHHHH----HcCCcceeeEEEEeecceEEEEeeccc------hhheeeeE
Confidence 1 111234555555554 444 4568999999999998877632 25677777
Q ss_pred ecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc---EEEEeCC-CCcCC
Q 007311 529 CSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS---VIIEHDC-GHIIP 591 (608)
Q Consensus 529 isG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~---~vv~~~g-GH~ip 591 (608)
+-|..... .....+++|+|.+.|+ .|..+|++...++.+.+++... .+.+|.+ +|.+-
T Consensus 150 ~hps~~d~--~D~~~vk~Pilfl~ae---~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 150 FHPSFVDS--ADIANVKAPILFLFAE---LDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred ecCCcCCh--hHHhcCCCCEEEEeec---ccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 66655543 3567888999999999 8999999999999999987533 5777876 89754
No 160
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.99 E-value=8.9e-05 Score=77.93 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=46.9
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCc-EEEEeCCCCc-CCCChh-hHHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCS-VIIEHDCGHI-IPTRSP-YIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~-~vv~~~gGH~-ip~~~~-~~~~i~~Fl~~ 606 (608)
...++.|+|++-=+ .|...|++..+++++.+..... ..+.-+.||- +-.+.+ +...|..||+.
T Consensus 302 l~~i~~~~lv~gi~---sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKAPVLVVGIT---SDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCccCEEEEEec---ccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 45689999999888 8999999999999999998653 3344456885 333333 44778888764
No 161
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.98 E-value=4.1e-05 Score=79.14 Aligned_cols=38 Identities=13% Similarity=-0.074 Sum_probs=31.5
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
...|+|||+||.+|..++.+. +.+++.+|++.+..|..
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~-----~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRL-----NGKLGRITGLDPAGPLF 150 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHh-----cCccceeEEecCCcccc
Confidence 457999999999999999865 34799999998877654
No 162
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.97 E-value=0.00053 Score=68.38 Aligned_cols=126 Identities=20% Similarity=0.133 Sum_probs=84.3
Q ss_pred HHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC---ccc--------------
Q 007311 481 LAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH---SAE-------------- 538 (608)
Q Consensus 481 ~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~---~~~-------------- 538 (608)
..||+.++... .+..-++||||||.-...++.....-..-+++...|++.|..-. ...
T Consensus 119 s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~ 198 (288)
T COG4814 119 SKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLI 198 (288)
T ss_pred HHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCcccc
Confidence 44555555442 35667999999999999999877643445778899998886541 110
Q ss_pred -----------cccCCCCCCEEEEEcCCC---CCCcccchHHHHHHHHHhccCCcEEEE--e---CCCCc-CCCChhhHH
Q 007311 539 -----------FEHRSINCPSLHIFGGDL---GNDRQVANQASKELAKAFEEGCSVIIE--H---DCGHI-IPTRSPYID 598 (608)
Q Consensus 539 -----------~~~~~i~~PvL~i~G~~~---~~D~~Vp~~~~~~l~~~~~~~~~~vv~--~---~gGH~-ip~~~~~~~ 598 (608)
.....-.+-+|.|.|+-+ -.|..||...+..++.+|......+++ + +.-|. +|..+....
T Consensus 199 ~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~v~~ 278 (288)
T COG4814 199 KTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPTVAK 278 (288)
T ss_pred CcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChhHHH
Confidence 001123467999999842 127889999999999999876333333 2 24564 566566778
Q ss_pred HHHHHHHH
Q 007311 599 EIKSFLQR 606 (608)
Q Consensus 599 ~i~~Fl~~ 606 (608)
.+..||-+
T Consensus 279 yv~~FLw~ 286 (288)
T COG4814 279 YVKNFLWE 286 (288)
T ss_pred HHHHHhhc
Confidence 88888854
No 163
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.95 E-value=0.00063 Score=71.54 Aligned_cols=162 Identities=14% Similarity=0.133 Sum_probs=92.5
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
..+-.+|+|||+|.++. |-+.++.|++.|+ .++..+.+..|.......+... ... + ......-.=...+
T Consensus 85 ~~~G~vIilp~~g~~~d-~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~-~~~------~--~~~~a~~~~~~~~ 154 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPD-WPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA-TEA------E--EVPSAGDQQLSQP 154 (310)
T ss_pred CCceEEEEecCCCCCCC-cHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC-CCC------C--CCCCCCCCCcCCC
Confidence 44557999999999983 4556779999998 5888888887753321000000 000 0 0000000000000
Q ss_pred CCCCccccccccCCCCCC--CcccccccccHHHHHHHHHHHHhHhCCc-eEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 449 DFSGKRETNWKLADGPFD--PHQYQQQTDGLDVSLAYLKTIFSQEGPF-DGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d--~~~~~~~~~~l~~s~~~L~~~i~~~~~~-~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
. .. ...... ...+....+.+...++.+..+....+.+ .+|+|+++||.+++.+....+ ...+.+
T Consensus 155 ~-----~~----~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~----~~~~da 221 (310)
T PF12048_consen 155 S-----DE----PSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKP----PPMPDA 221 (310)
T ss_pred C-----CC----CccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCC----CcccCe
Confidence 0 00 000000 0001111223334444444455555555 689999999999999998543 345889
Q ss_pred EEEecCCCCCccc-----cccCCCCCCEEEEEcC
Q 007311 526 AILCSGFALHSAE-----FEHRSINCPSLHIFGG 554 (608)
Q Consensus 526 vIlisG~~~~~~~-----~~~~~i~~PvL~i~G~ 554 (608)
+|+++.+.|.... .....+++|||=|++.
T Consensus 222 LV~I~a~~p~~~~n~~l~~~la~l~iPvLDi~~~ 255 (310)
T PF12048_consen 222 LVLINAYWPQPDRNPALAEQLAQLKIPVLDIYSA 255 (310)
T ss_pred EEEEeCCCCcchhhhhHHHHhhccCCCEEEEecC
Confidence 9999999987654 3456899999999998
No 164
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.95 E-value=0.00035 Score=65.01 Aligned_cols=85 Identities=16% Similarity=0.084 Sum_probs=57.6
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEec-CCCCCcc-c----cccCCCCCCEEEEEcCCCCCCcccchHHHHH
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCS-GFALHSA-E----FEHRSINCPSLHIFGGDLGNDRQVANQASKE 569 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlis-G~~~~~~-~----~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~ 569 (608)
+|.|.||||.+|..++... ..++.++++++ .+.|+.. + .-..-+++|+|+++|+ .|+.=..+..
T Consensus 92 i~GGkSmGGR~aSmvade~-----~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGt---rD~fGtr~~V-- 161 (213)
T COG3571 92 IIGGKSMGGRVASMVADEL-----QAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGT---RDEFGTRDEV-- 161 (213)
T ss_pred eeccccccchHHHHHHHhh-----cCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeecc---cccccCHHHH--
Confidence 7899999999999998843 45588888877 4444432 2 2356789999999999 7877543333
Q ss_pred HHHHhccCCcEEEEeC-CCCcCC
Q 007311 570 LAKAFEEGCSVIIEHD-CGHIIP 591 (608)
Q Consensus 570 l~~~~~~~~~~vv~~~-gGH~ip 591 (608)
+...-....++++.. +.|-.-
T Consensus 162 -a~y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 162 -AGYALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred -HhhhcCCceEEEEeccCccccc
Confidence 222222337777765 467653
No 165
>PRK10115 protease 2; Provisional
Probab=97.94 E-value=9.8e-05 Score=85.80 Aligned_cols=112 Identities=16% Similarity=-0.003 Sum_probs=73.6
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-----c----------
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-----E---------- 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-----~---------- 538 (608)
..++..++++|.+.=-......+|.|-|.||.|+++++.+. +..++++|...|+.-... .
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e 579 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----PELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEE 579 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----hhheeEEEecCCchhHhhhcccCCCCCChhHHHH
Confidence 34555555555322111234568999999999999988743 456888888766653220 0
Q ss_pred -------------------cccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCC--cE-EEE---eCCCCcCCC
Q 007311 539 -------------------FEHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGC--SV-IIE---HDCGHIIPT 592 (608)
Q Consensus 539 -------------------~~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~-vv~---~~gGH~ip~ 592 (608)
....+++.| +|+++|. +|+.||+..+.++...+.... .. ++. .+.||.-..
T Consensus 580 ~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~---~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~ 656 (686)
T PRK10115 580 WGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGL---HDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKS 656 (686)
T ss_pred hCCCCCHHHHHHHHHcCchhccCccCCCceeEEecC---CCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCc
Confidence 123456899 4566999 899999999999998887532 22 333 467998554
Q ss_pred C
Q 007311 593 R 593 (608)
Q Consensus 593 ~ 593 (608)
.
T Consensus 657 ~ 657 (686)
T PRK10115 657 G 657 (686)
T ss_pred C
Confidence 3
No 166
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.94 E-value=5.6e-05 Score=76.95 Aligned_cols=101 Identities=25% Similarity=0.308 Sum_probs=77.9
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
++|+|+|+.++....|. .|...|.+...++.+++| .|..
T Consensus 1 ~pLF~fhp~~G~~~~~~----~L~~~l~~~~~v~~l~a~-------------------------------g~~~------ 39 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA----PLAAALGPLLPVYGLQAP-------------------------------GYGA------ 39 (257)
T ss_pred CCEEEEcCCCCcHHHHH----HHHHHhccCceeeccccC-------------------------------cccc------
Confidence 35899999999999999 999999988999999988 1110
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..+....+++.++...+.|.+. ||+ .++|||.||.+|+.+|.+... ....+.+++++
T Consensus 40 -----------------~~~~~~~l~~~a~~yv~~Ir~~QP~GPy-~L~G~S~GG~vA~evA~qL~~--~G~~Va~L~ll 99 (257)
T COG3319 40 -----------------GEQPFASLDDMAAAYVAAIRRVQPEGPY-VLLGWSLGGAVAFEVAAQLEA--QGEEVAFLGLL 99 (257)
T ss_pred -----------------cccccCCHHHHHHHHHHHHHHhCCCCCE-EEEeeccccHHHHHHHHHHHh--CCCeEEEEEEe
Confidence 0012345677777766666653 566 799999999999999998763 24678999998
Q ss_pred cCCCC
Q 007311 530 SGFAL 534 (608)
Q Consensus 530 sG~~~ 534 (608)
-.+++
T Consensus 100 D~~~~ 104 (257)
T COG3319 100 DAVPP 104 (257)
T ss_pred ccCCC
Confidence 88877
No 167
>COG3150 Predicted esterase [General function prediction only]
Probab=97.91 E-value=0.00022 Score=66.80 Aligned_cols=116 Identities=18% Similarity=0.201 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------
Q 007311 477 LDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE----------------- 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~----------------- 538 (608)
...+++.|.++|.+.+ +..+|+|=|.||.-|.+++.+.. ++.+|+-....|...-
T Consensus 42 p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G-------irav~~NPav~P~e~l~gylg~~en~ytg~~y~ 114 (191)
T COG3150 42 PQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG-------IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYV 114 (191)
T ss_pred HHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC-------ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEE
Confidence 5668888999998877 44689999999999999998642 4444443332222110
Q ss_pred -----------cccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 -----------FEHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 -----------~~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.....++-| .+.+.-.. -|.+.. .++..+.+.. +.++++.++.|.+.....++++|+.|..
T Consensus 115 le~~hI~~l~~~~~~~l~~p~~~~lL~qt--gDEvLD---yr~a~a~y~~-~~~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 115 LESRHIATLCVLQFRELNRPRCLVLLSQT--GDEVLD---YRQAVAYYHP-CYEIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred eehhhHHHHHHhhccccCCCcEEEeeccc--ccHHHH---HHHHHHHhhh-hhheeecCCCccccchHHhHHHHHHHhc
Confidence 122344445 34445541 388876 4455555554 2556666678999888889999999974
No 168
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.87 E-value=0.00032 Score=73.65 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=41.1
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc--CCCC-hhhHHHHHHHHH
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI--IPTR-SPYIDEIKSFLQ 605 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~--ip~~-~~~~~~i~~Fl~ 605 (608)
-.+++|.++ +|..||......|.+.-+. .++.+.+|||. +-.. ..+.++|.+-|.
T Consensus 290 ~~ii~V~A~---~DaYVPr~~v~~Lq~~WPG--sEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAK---NDAYVPRHGVLSLQEIWPG--SEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEec---CceEechhhcchHHHhCCC--CeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 346677777 8999999888899988887 88888899997 2222 336677776654
No 169
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.85 E-value=0.00059 Score=71.55 Aligned_cols=125 Identities=13% Similarity=0.022 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-c-----------
Q 007311 474 TDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-E----------- 538 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-~----------- 538 (608)
.++..+++.+|.+...+. .....|+|.|-||.+|+.++....+. +.....+.++++++..... .
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~ 208 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLTSSAASLPGYGEADL 208 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCcccccchhhcCCccc
Confidence 345667778877665543 35568999999999999999876532 3456788888888754432 0
Q ss_pred ---------------------c---------c-cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEEeC
Q 007311 539 ---------------------F---------E-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIEHD 585 (608)
Q Consensus 539 ---------------------~---------~-~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~~~ 585 (608)
. . ... --|+++++|+ .|.+.+ .++.+++.+...+ +++..++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~---~D~l~~--~~~~~a~~L~~agv~~~~~~~~ 282 (312)
T COG0657 209 LDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAE---FDPLRD--EGEAYAERLRAAGVPVELRVYP 282 (312)
T ss_pred cCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecC---CCcchh--HHHHHHHHHHHcCCeEEEEEeC
Confidence 0 0 011 3689999999 899887 6777777776543 4556666
Q ss_pred C-CCcCCCC-----hhhHHHHHHHHH
Q 007311 586 C-GHIIPTR-----SPYIDEIKSFLQ 605 (608)
Q Consensus 586 g-GH~ip~~-----~~~~~~i~~Fl~ 605 (608)
+ .|.+... ..-...+.+|+.
T Consensus 283 g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 283 GMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred CcceeccccCcHHHHHHHHHHHHHHH
Confidence 5 7876221 223455666665
No 170
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.80 E-value=0.00014 Score=69.82 Aligned_cols=119 Identities=20% Similarity=0.208 Sum_probs=79.3
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--cccCCCCCCEEE
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE--FEHRSINCPSLH 550 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~--~~~~~i~~PvL~ 550 (608)
..++...+++|+...-... +..-|.|||.|+.||+.+|.+.+ .. .+++|..++.... .......+|.++
T Consensus 84 E~~Da~aaldW~~~~hp~s-~~~~l~GfSFGa~Ia~~la~r~~------e~--~~~is~~p~~~~~dfs~l~P~P~~~lv 154 (210)
T COG2945 84 ELEDAAAALDWLQARHPDS-ASCWLAGFSFGAYIAMQLAMRRP------EI--LVFISILPPINAYDFSFLAPCPSPGLV 154 (210)
T ss_pred hHHHHHHHHHHHHhhCCCc-hhhhhcccchHHHHHHHHHHhcc------cc--cceeeccCCCCchhhhhccCCCCCcee
Confidence 3456777777776552221 22247899999999999998653 22 2334443333321 234567899999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCChh-hHHHHHHHHH
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTRSP-YIDEIKSFLQ 605 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~-~~~~i~~Fl~ 605 (608)
|+|+ .|.+++.....++++-.+. ..++..+.+|++...-. ..+.+.+||.
T Consensus 155 i~g~---~Ddvv~l~~~l~~~~~~~~--~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 155 IQGD---ADDVVDLVAVLKWQESIKI--TVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred EecC---hhhhhcHHHHHHhhcCCCC--ceEEecCCCceecccHHHHHHHHHHHhh
Confidence 9999 8999998888888776332 55566677999877544 5677788874
No 171
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=97.80 E-value=6.4e-05 Score=77.42 Aligned_cols=111 Identities=18% Similarity=0.064 Sum_probs=71.3
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCCh--hhhhccccCCCCccccC----cccccCCCch--HHHHhh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNL--YETRIGKFRTPSVETLD----PEIRQFSDLP--TWIDNN 200 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~--~E~~~Gh~~g~~~~~l~----~~~~~~~~~~--~~~~~~ 200 (608)
..-++|+.+.+.|++. +..-.++.+++++.. .+|..|||+||....++ .+...-..+| +.+.+.
T Consensus 10 ~~lVs~~wl~~~l~~~--------~~~~~d~~~~~~~~~~~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~ 81 (285)
T COG2897 10 EFLVSPDWLAENLDDP--------AVVIVDARIILPDPDDAEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKL 81 (285)
T ss_pred ceEEcHHHHHhhcccc--------ccccCceEEEeCCcchHHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHH
Confidence 4568899999888642 011136667766666 89999999996421111 1110011222 233322
Q ss_pred ---hhhcCCCeEEEEcCCCcc-HHHHHHHHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 201 ---AEQLQGKHVLMYCTGGIR-CEMASAYVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 201 ---~~~~k~k~Iv~yCtgGiR-~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
+....|.+||+|-.+|.- +.+|.-.|+- +|.+||+.|.||+.+|+.+
T Consensus 82 ~~~~GI~~d~tVVvYdd~~~~~A~ra~W~l~~--~Gh~~V~iLdGG~~~W~~~ 132 (285)
T COG2897 82 LGELGIRNDDTVVVYDDGGGFFAARAWWLLRY--LGHENVRILDGGLPAWKAA 132 (285)
T ss_pred HHHcCCCCCCEEEEECCCCCeehHHHHHHHHH--cCCCceEEecCCHHHHHHc
Confidence 345789999999976665 4455555555 4999999999999999975
No 172
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.78 E-value=0.00037 Score=79.15 Aligned_cols=40 Identities=13% Similarity=-0.101 Sum_probs=27.4
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+++.+.++++.+.-- ....++++|+|+||.+++.+|...
T Consensus 79 ~~D~~~~i~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~ 118 (550)
T TIGR00976 79 AADGYDLVDWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ 118 (550)
T ss_pred chHHHHHHHHHHhCCC-CCCcEEEEEeChHHHHHHHHhccC
Confidence 4556666776644311 123568999999999999998853
No 173
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.77 E-value=0.00035 Score=82.01 Aligned_cols=127 Identities=16% Similarity=0.207 Sum_probs=89.0
Q ss_pred cccHHHHHHHHHHHH----h--------H--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC----
Q 007311 474 TDGLDVSLAYLKTIF----S--------Q--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH---- 535 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i----~--------~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~---- 535 (608)
.++..++++||...- + + ....++++|.|+||.+++.+|.. +++.++++|..++....
T Consensus 305 ~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~-----~pp~LkAIVp~a~is~~yd~y 379 (767)
T PRK05371 305 IESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATT-----GVEGLETIIPEAAISSWYDYY 379 (767)
T ss_pred HHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhh-----CCCcceEEEeeCCCCcHHHHh
Confidence 456778888887421 1 1 02345899999999999998883 35667777775543100
Q ss_pred -c------------------------------------------------------cc-----------cccCCCCCCEE
Q 007311 536 -S------------------------------------------------------AE-----------FEHRSINCPSL 549 (608)
Q Consensus 536 -~------------------------------------------------------~~-----------~~~~~i~~PvL 549 (608)
. .. ....++++|+|
T Consensus 380 r~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvL 459 (767)
T PRK05371 380 RENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVL 459 (767)
T ss_pred hcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEE
Confidence 0 00 11246899999
Q ss_pred EEEcCCCCCCcccchHHHHHHHHHhcc--CCcEEEEeCCCCcCCCCh---hhHHHHHHHHHHhC
Q 007311 550 HIFGGDLGNDRQVANQASKELAKAFEE--GCSVIIEHDCGHIIPTRS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 550 ~i~G~~~~~D~~Vp~~~~~~l~~~~~~--~~~~vv~~~gGH~ip~~~---~~~~~i~~Fl~~~L 608 (608)
+|||. +|..++...+.++++.+.. ....++.|.++|..+... ++.+.+.+||.++|
T Consensus 460 lIhGw---~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~L 520 (767)
T PRK05371 460 VVHGL---NDWNVKPKQVYQWWDALPENGVPKKLFLHQGGHVYPNNWQSIDFRDTMNAWFTHKL 520 (767)
T ss_pred EEeeC---CCCCCChHHHHHHHHHHHhcCCCeEEEEeCCCccCCCchhHHHHHHHHHHHHHhcc
Confidence 99999 8999998889888888864 236778889999765432 35778889998765
No 174
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.72 E-value=0.00063 Score=76.03 Aligned_cols=45 Identities=22% Similarity=0.331 Sum_probs=40.6
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
...|++|+|.+.|. .|.++|.+.+.++.+++... .+++..++||+
T Consensus 437 L~~I~~Pvl~va~~---~DHIvPw~s~~~~~~l~gs~-~~fvl~~gGHI 481 (560)
T TIGR01839 437 LKKVKCDSFSVAGT---NDHITPWDAVYRSALLLGGK-RRFVLSNSGHI 481 (560)
T ss_pred hhcCCCCeEEEecC---cCCcCCHHHHHHHHHHcCCC-eEEEecCCCcc
Confidence 46789999999999 89999999999999998764 88888899997
No 175
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.70 E-value=0.00025 Score=69.57 Aligned_cols=112 Identities=17% Similarity=0.068 Sum_probs=75.8
Q ss_pred ccccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC-cc--c--------
Q 007311 473 QTDGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH-SA--E-------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~-~~--~-------- 538 (608)
..++..+++++|.+...+. ....+|+|+|-||.+|+.++....+. +...++++++++++... .. .
T Consensus 48 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~-~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~ 126 (211)
T PF07859_consen 48 ALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR-GLPKPKGIILISPWTDLQDFDGPSYDDSNEN 126 (211)
T ss_dssp HHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-TTCHESEEEEESCHSSTSTSSCHHHHHHHHH
T ss_pred cccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh-cccchhhhhcccccccchhcccccccccccc
Confidence 4567778888887775443 24557999999999999999876542 23569999999998533 10 0
Q ss_pred -----------------------c---------c-cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE
Q 007311 539 -----------------------F---------E-HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE 583 (608)
Q Consensus 539 -----------------------~---------~-~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~ 583 (608)
. . ...--.|+++++|+ .|..+ ..+.++++.++..+ ++++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~---~D~l~--~~~~~~~~~L~~~gv~v~~~~ 201 (211)
T PF07859_consen 127 KDDPFLPAPKIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGE---DDVLV--DDSLRFAEKLKKAGVDVELHV 201 (211)
T ss_dssp STTSSSBHHHHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEET---TSTTH--HHHHHHHHHHHHTT-EEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCeeeeccc---cccch--HHHHHHHHHHHHCCCCEEEEE
Confidence 0 0 00112489999999 78765 46788888887543 45556
Q ss_pred eCC-CCcC
Q 007311 584 HDC-GHII 590 (608)
Q Consensus 584 ~~g-GH~i 590 (608)
+++ +|.+
T Consensus 202 ~~g~~H~f 209 (211)
T PF07859_consen 202 YPGMPHGF 209 (211)
T ss_dssp ETTEETTG
T ss_pred ECCCeEEe
Confidence 665 7864
No 176
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.68 E-value=0.0014 Score=71.63 Aligned_cols=101 Identities=16% Similarity=0.039 Sum_probs=68.4
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc----------c--cc--cCCCCCCEEEEEcCCCCCCc
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA----------E--FE--HRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~----------~--~~--~~~i~~PvL~i~G~~~~~D~ 560 (608)
.+|.|+||||..|+.+++++ +..|+.++++||...... + .. .....+.+++-+|+ .|.
T Consensus 290 ~~IaG~S~GGl~AL~~al~~-----Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~~~~~~lr~~i~~G~---~E~ 361 (411)
T PRK10439 290 TVVAGQSFGGLAALYAGLHW-----PERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGEVSARGLRIVLEAGR---REP 361 (411)
T ss_pred eEEEEEChHHHHHHHHHHhC-----cccccEEEEeccceecCCccCCchhHHHHHHHhcccCCCCceEEEeCCC---CCc
Confidence 46999999999999999954 678999999998752110 0 01 11233568888998 665
Q ss_pred ccchHHHHHHHHHhccCC--cEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGC--SVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~--~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
.+ .+..+++++.++..+ ..+.+++|||....-+..+.+-..||
T Consensus 362 ~~-~~~~~~l~~~L~~~G~~~~~~~~~GGHd~~~Wr~~L~~~L~~l 406 (411)
T PRK10439 362 MI-MRANQALYAQLHPAGHSVFWRQVDGGHDALCWRGGLIQGLIDL 406 (411)
T ss_pred hH-HHHHHHHHHHHHHCCCcEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 44 466788999888643 56677889998755444443333333
No 177
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.65 E-value=0.0014 Score=70.93 Aligned_cols=63 Identities=17% Similarity=0.241 Sum_probs=46.0
Q ss_pred cCCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHh---ccCCc-EEEEeCCCCc-CCCC----hhhHHHHHHHHHH
Q 007311 541 HRSIN-CPSLHIFGGDLGNDRQVANQASKELAKAF---EEGCS-VIIEHDCGHI-IPTR----SPYIDEIKSFLQR 606 (608)
Q Consensus 541 ~~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~---~~~~~-~vv~~~gGH~-ip~~----~~~~~~i~~Fl~~ 606 (608)
...|+ +|+|.|.|+ +|.++|+..++.+.+++ ..... .....++||. +-.. .+....|.+||.+
T Consensus 333 l~~I~~~pll~V~ge---~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 333 PGAITRVALLTVEGE---NDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHHCcccceEEEecc---CCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 45788 999999999 89999999999999987 33223 4444588997 2111 1245678888865
No 178
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.51 E-value=0.00048 Score=74.42 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=36.0
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGG 554 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~ 554 (608)
++++|||.||+.|+.++.. ..+++.+|++-+|..+........++.|+|+|..+
T Consensus 230 i~~~GHSFGGATa~~~l~~------d~r~~~~I~LD~W~~Pl~~~~~~~i~~P~L~InSe 283 (379)
T PF03403_consen 230 IGLAGHSFGGATALQALRQ------DTRFKAGILLDPWMFPLGDEIYSKIPQPLLFINSE 283 (379)
T ss_dssp EEEEEETHHHHHHHHHHHH-------TT--EEEEES---TTS-GGGGGG--S-EEEEEET
T ss_pred eeeeecCchHHHHHHHHhh------ccCcceEEEeCCcccCCCcccccCCCCCEEEEECc
Confidence 3599999999999988874 36799999999998765544456789999999887
No 179
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.49 E-value=0.0064 Score=62.57 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=72.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
++..||++.|.=+-.+.+..-+..|.+.|...+.++.+.-. |... +.. .... .
T Consensus 1 ~~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~-----------------~~~----~~~~--~--- 54 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTS-----------------PSN----SKFS--P--- 54 (266)
T ss_pred CcEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCC-----------------ccc----cccc--C---
Confidence 35679999999999999998888999988777877777422 1100 000 0000 0
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
....|+ ..+.++.-++.|.+.+.. .....+|+|||.||-|++.++.+.. ....++.++
T Consensus 55 -----------~~~~~s------L~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~--~~~~~V~~~ 115 (266)
T PF10230_consen 55 -----------NGRLFS------LQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP--DLKFRVKKV 115 (266)
T ss_pred -----------CCCccC------HHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--ccCCceeEE
Confidence 011111 123455555666666654 2344579999999999999998764 123456666
Q ss_pred EEecCC
Q 007311 527 ILCSGF 532 (608)
Q Consensus 527 IlisG~ 532 (608)
+++-+.
T Consensus 116 ~lLfPT 121 (266)
T PF10230_consen 116 ILLFPT 121 (266)
T ss_pred EEeCCc
Confidence 665544
No 180
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.41 E-value=9.8e-05 Score=78.30 Aligned_cols=82 Identities=16% Similarity=0.057 Sum_probs=44.4
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------------------------c---------
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------------------------A--------- 537 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------------------------~--------- 537 (608)
...++++||||||..++.++++- .+++..|+.+-..... +
T Consensus 225 ~~RIG~~GfSmGg~~a~~LaALD------dRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~P 298 (390)
T PF12715_consen 225 PDRIGCMGFSMGGYRAWWLAALD------DRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFP 298 (390)
T ss_dssp EEEEEEEEEGGGHHHHHHHHHH-------TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HH
T ss_pred ccceEEEeecccHHHHHHHHHcc------hhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccH
Confidence 34557999999999999999863 4565555422111000 0
Q ss_pred ccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC-CcEEEEe
Q 007311 538 EFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG-CSVIIEH 584 (608)
Q Consensus 538 ~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-~~~vv~~ 584 (608)
+-..-...-|+|++-|. .|+.+|. .++.++..... ..++..+
T Consensus 299 dIasliAPRPll~~nG~---~Dklf~i--V~~AY~~~~~p~n~~~~~~ 341 (390)
T PF12715_consen 299 DIASLIAPRPLLFENGG---KDKLFPI--VRRAYAIMGAPDNFQIHHY 341 (390)
T ss_dssp HHHHTTTTS-EEESS-B----HHHHHH--HHHHHHHTT-GGGEEE---
T ss_pred HHHHHhCCCcchhhcCC---cccccHH--HHHHHHhcCCCcceEEeec
Confidence 01123457899999999 8998865 56666665532 2444443
No 181
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.41 E-value=0.0031 Score=63.50 Aligned_cols=163 Identities=19% Similarity=0.151 Sum_probs=96.1
Q ss_pred CCCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 368 VCRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 368 ~~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
....-|.|+|+|||.-..+.+.+.+.-++. .++-+|.+|--.. .|-+
T Consensus 42 ~~G~yPVilF~HG~~l~ns~Ys~lL~HIAS---HGfIVVAPQl~~~-----------------------------~~p~- 88 (307)
T PF07224_consen 42 EAGTYPVILFLHGFNLYNSFYSQLLAHIAS---HGFIVVAPQLYTL-----------------------------FPPD- 88 (307)
T ss_pred cCCCccEEEEeechhhhhHHHHHHHHHHhh---cCeEEEechhhcc-----------------------------cCCC-
Confidence 334568999999999998888733333332 3566665542210 1100
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC--------CceEEEecChhHHHHHHHHHHHhhhhC
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG--------PFDGILGFSQGAAMAASVCAQWERLKG 519 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~--------~~~~IlGFSQGa~vAl~la~~~~~~~~ 519 (608)
-+...+...+.++||..-+.... ...++.|||.||..|..+|+.+. .
T Consensus 89 ----------------------~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a---~ 143 (307)
T PF07224_consen 89 ----------------------GQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA---T 143 (307)
T ss_pred ----------------------chHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc---c
Confidence 01224556677777777766532 23369999999999999998542 2
Q ss_pred CCCccEEEEecCCCCCc---------cc--cccCCCCCCEEEEEcCCCC--CCcccch-----HHHHHHHHHhccCCcEE
Q 007311 520 EIDFRFAILCSGFALHS---------AE--FEHRSINCPSLHIFGGDLG--NDRQVAN-----QASKELAKAFEEGCSVI 581 (608)
Q Consensus 520 ~~~l~~vIlisG~~~~~---------~~--~~~~~i~~PvL~i~G~~~~--~D~~Vp~-----~~~~~l~~~~~~~~~~v 581 (608)
..+|.++|.+-...-.. .. ...-.+.+|+++|-.. -| .....|. -..++..+.|+..+..+
T Consensus 144 ~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~SF~l~iPv~VIGtG-Lg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hf 222 (307)
T PF07224_consen 144 SLKFSALIGIDPVAGTSKGKQTPPPILTYVPQSFDLDIPVLVIGTG-LGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHF 222 (307)
T ss_pred cCchhheecccccCCCCCCCCCCCCeeecCCcccccCCceEEEecC-cCccccCCCCCCCCCCcCHHHHHHhhcccceee
Confidence 34555666543332111 11 1234567999997432 11 2222221 23566777777776778
Q ss_pred EEeCCCCc
Q 007311 582 IEHDCGHI 589 (608)
Q Consensus 582 v~~~gGH~ 589 (608)
+.-+.||+
T Consensus 223 V~~dYGHm 230 (307)
T PF07224_consen 223 VAKDYGHM 230 (307)
T ss_pred eecccccc
Confidence 88888998
No 182
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.37 E-value=0.003 Score=60.71 Aligned_cols=104 Identities=12% Similarity=0.143 Sum_probs=62.5
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------------------------
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------------------------ 538 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------------------------ 538 (608)
..++|||+||.+|..++..... ....+.+++++....+....
T Consensus 66 ~~l~g~s~Gg~~a~~~a~~l~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (212)
T smart00824 66 FVLVGHSSGGLLAHAVAARLEA--RGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDARLTAMGAYLRL 143 (212)
T ss_pred eEEEEECHHHHHHHHHHHHHHh--CCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccchhhhHHHHHHHH
Confidence 3899999999999999987652 23456777776654432100
Q ss_pred ---cccCCCCCCEEEEEcCCCCCCccc-chHHHHHHHHHhccCCcEEEEeCCCCcCCCChhhHHHHHHHHH
Q 007311 539 ---FEHRSINCPSLHIFGGDLGNDRQV-ANQASKELAKAFEEGCSVIIEHDCGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 539 ---~~~~~i~~PvL~i~G~~~~~D~~V-p~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~~~~~~~i~~Fl~ 605 (608)
.....+.+|+.++.|+ .|... +......+.+... ....+...+++|...... ....+..-+.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~W~~~~~-~~~~~~~~~g~H~~~~~~-~~~~~~~~~~ 209 (212)
T smart00824 144 FGGWTPGPVAAPTLLVRAS---EPLAEWPDEDPDGWRAHWP-LPHTVVDVPGDHFTMMEE-HAAATARAVH 209 (212)
T ss_pred hccCCCCCCCCCEEEEecc---CCCCCCCCCCcccccCCCC-CCceeEEccCchHHHHHH-hHHHHHHHHH
Confidence 0123567899999998 56443 2222223333333 347788889999864322 4455544443
No 183
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.34 E-value=0.0036 Score=65.24 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=43.4
Q ss_pred CCCCEEEEEcCCCCCCcccchHHHHHHHHHhc-cC--CcEEEEeC-CCCcCCCChhhHHHHHHHHHHh
Q 007311 544 INCPSLHIFGGDLGNDRQVANQASKELAKAFE-EG--CSVIIEHD-CGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 544 i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~-~~--~~~vv~~~-gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
-+.|+++.||. .|.+||.....++.+.+. .+ .++++.+. ++|.... ..-......||.++
T Consensus 218 P~~Pv~i~~g~---~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~-~~~~~~a~~Wl~~r 281 (290)
T PF03583_consen 218 PTVPVLIYQGT---ADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA-FASAPDALAWLDDR 281 (290)
T ss_pred CCCCEEEEecC---CCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh-hcCcHHHHHHHHHH
Confidence 36999999999 899999999999886554 33 35555555 4887532 13457778888765
No 184
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00063 Score=65.81 Aligned_cols=105 Identities=14% Similarity=0.106 Sum_probs=71.5
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc-----------------------cccCCCCCCEEE
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-----------------------FEHRSINCPSLH 550 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-----------------------~~~~~i~~PvL~ 550 (608)
...+.|||-||-+|+.+..++. .+++.++++++|.+-.... .....++.|+|+
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r----~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~v~~~ilV 212 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQR----SPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTDVTVWILV 212 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhc----CchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcCceeeeeE
Confidence 3468899999999999887654 5678899998887654321 234567899999
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCC--hhhHHHHHHHHHHh
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTR--SPYIDEIKSFLQRF 607 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~--~~~~~~i~~Fl~~~ 607 (608)
+.+. .|.---.+..+..++.+.. ..+..+.+ +|.-... .-.-..+..|++++
T Consensus 213 v~~~---~espklieQnrdf~~q~~~--a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 213 VAAE---HESPKLIEQNRDFADQLRK--ASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred eeec---ccCcHHHHhhhhHHHHhhh--cceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 9999 7765556677777777665 55566665 8872221 11234556666654
No 185
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.30 E-value=0.0019 Score=66.53 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=72.6
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------- 538 (608)
...+..++++++.+. .-..-.++++|.|.+|..++.+|. ..++.|+++|..++......+
T Consensus 82 e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~-----~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~ 155 (272)
T PF02129_consen 82 EAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAA-----RRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFA 155 (272)
T ss_dssp HHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHT-----TT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHH
T ss_pred HHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHh-----cCCCCceEEEecccCCcccccchhcCCcccccchh
Confidence 455677777777664 111224589999999999999998 346778888887655433220
Q ss_pred ------------------------------------------------------------------cccCCCCCCEEEEE
Q 007311 539 ------------------------------------------------------------------FEHRSINCPSLHIF 552 (608)
Q Consensus 539 ------------------------------------------------------------------~~~~~i~~PvL~i~ 552 (608)
....++++|+|++.
T Consensus 156 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~ 235 (272)
T PF02129_consen 156 GWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVG 235 (272)
T ss_dssp HHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEE
T ss_pred HHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEec
Confidence 12368899999999
Q ss_pred cCCCCCCcccchHHHHHHHHHhccCC---cEEEEeCCCCc
Q 007311 553 GGDLGNDRQVANQASKELAKAFEEGC---SVIIEHDCGHI 589 (608)
Q Consensus 553 G~~~~~D~~Vp~~~~~~l~~~~~~~~---~~vv~~~gGH~ 589 (608)
|- .|.... ..+.+..+.+.... ..++..+.+|.
T Consensus 236 Gw---~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 236 GW---YDTLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp ET---TCSSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred cc---CCcccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 99 896666 66777777777654 27888888885
No 186
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.28 E-value=0.0046 Score=59.81 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=53.3
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc------------cc-------cccCCC-CCCEEEE
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS------------AE-------FEHRSI-NCPSLHI 551 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~------------~~-------~~~~~i-~~PvL~i 551 (608)
.....|+|||+||-|.-.+.-+.+. .....++.+++++....-. .. .+..++ ..|++-|
T Consensus 67 ~~~vvLiGYSFGADvlP~~~nrLp~-~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~Ci 145 (192)
T PF06057_consen 67 RKRVVLIGYSFGADVLPFIYNRLPA-ALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCI 145 (192)
T ss_pred CceEEEEeecCCchhHHHHHhhCCH-HHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEE
Confidence 3556899999999666555544321 1134566666655433211 11 122233 3699999
Q ss_pred EcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 552 FGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 552 ~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
+|++ .+|...| .++....+++..+|||++-.+
T Consensus 146 yG~~-E~d~~cp---------~l~~~~~~~i~lpGgHHfd~d 177 (192)
T PF06057_consen 146 YGED-EDDSLCP---------SLRQPGVEVIALPGGHHFDGD 177 (192)
T ss_pred EcCC-CCCCcCc---------cccCCCcEEEEcCCCcCCCCC
Confidence 9993 2232222 234445889999999999664
No 187
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.14 E-value=0.0082 Score=60.57 Aligned_cols=140 Identities=19% Similarity=0.142 Sum_probs=84.0
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+.+..+|++|||..+-+.-..+++.+...+.-...+|.+ .|=-
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~F----------------------------------sWPS--- 58 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILF----------------------------------SWPS--- 58 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEE----------------------------------EcCC---
Confidence 456689999999999887766777777776522233332 3310
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHh-----CCceEEEecChhHHHHHHHHHHHhhhhC----C
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQE-----GPFDGILGFSQGAAMAASVCAQWERLKG----E 520 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~-----~~~~~IlGFSQGa~vAl~la~~~~~~~~----~ 520 (608)
.+ ....|....+....+...|.++|... ...+.|++||||+.+.+.+......... .
T Consensus 59 ------------~g--~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~ 124 (233)
T PF05990_consen 59 ------------DG--SLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVK 124 (233)
T ss_pred ------------CC--ChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhH
Confidence 00 01111111223344455555555442 3455799999999999998776543211 2
Q ss_pred CCccEEEEecCCCCCccc----cccCCCCCCEEEEEcCCCCCCcccc
Q 007311 521 IDFRFAILCSGFALHSAE----FEHRSINCPSLHIFGGDLGNDRQVA 563 (608)
Q Consensus 521 ~~l~~vIlisG~~~~~~~----~~~~~i~~PvL~i~G~~~~~D~~Vp 563 (608)
..+.-+|++++-.+...- .......-++.+.+-. +|....
T Consensus 125 ~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~---~D~AL~ 168 (233)
T PF05990_consen 125 ARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSR---NDRALK 168 (233)
T ss_pred hhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcC---CchHHH
Confidence 367889999877665321 1233455778888887 788764
No 188
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.10 E-value=0.0023 Score=64.56 Aligned_cols=100 Identities=17% Similarity=0.048 Sum_probs=63.1
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc-------------cc-----c---ccCCCCCCEEEEEc
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS-------------AE-----F---EHRSINCPSLHIFG 553 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~-------------~~-----~---~~~~i~~PvL~i~G 553 (608)
.+|.|+||||..|+.+++++ +..|+.++++||+..+. .. . .......++.+..|
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~-----Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G 191 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRH-----PDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQKKKPLRIYLDVG 191 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHS-----TTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHTTSEEEEEEEEE
T ss_pred eEEeccCCCcHHHHHHHHhC-----ccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcccCCCeEEEEeC
Confidence 48999999999999999954 67899999999873221 00 0 13455677888899
Q ss_pred CCCCCCcccc----------hHHHHHHHHHhcc--CCcEEEEeCCCCcCCCChhhHHHHHH
Q 007311 554 GDLGNDRQVA----------NQASKELAKAFEE--GCSVIIEHDCGHIIPTRSPYIDEIKS 602 (608)
Q Consensus 554 ~~~~~D~~Vp----------~~~~~~l~~~~~~--~~~~vv~~~gGH~ip~~~~~~~~i~~ 602 (608)
+ .|.... ....+++.+.+.. .......++|+|..+.-...+.....
T Consensus 192 ~---~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~G~H~~~~W~~~l~~~L~ 249 (251)
T PF00756_consen 192 T---KDEFGGWEDSAQILQFLANNRELAQLLKAKGIPHTYHVFPGGHDWAYWRRRLPDALP 249 (251)
T ss_dssp T---TSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECTTESEEEHSESSHHHHHHHHHHHHH
T ss_pred C---CCcccccccCHHHHHHHHHhHhhHHHHHHcCCCceEEEecCccchhhHHHHHHHHHh
Confidence 9 565221 1233445555542 22455566789986554444444333
No 189
>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]
Probab=97.09 E-value=0.00083 Score=68.50 Aligned_cols=111 Identities=18% Similarity=0.332 Sum_probs=75.5
Q ss_pred CCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCC
Q 007311 128 AGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGK 207 (608)
Q Consensus 128 ~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k 207 (608)
.-+.|+++.++.+|+..- .++- .+.+|||+|=+|||.-|||.. ++|+..++ ++...+.. ....--.
T Consensus 240 s~~RIs~etlk~vl~g~~------~~~f-~kCiIIDCRFeYEY~GGHIin----aVNi~s~~--~l~~~F~h-kplThp~ 305 (427)
T COG5105 240 SIQRISVETLKQVLEGMY------NIDF-LKCIIIDCRFEYEYRGGHIIN----AVNISSTK--KLGLLFRH-KPLTHPR 305 (427)
T ss_pred chhhcCHHHHHHHHhchh------hhhh-hceeEEeecceeeecCceeee----eeecchHH--HHHHHHHh-ccccCce
Confidence 357899999999997421 0111 136799999999999999987 56554221 11111100 0111235
Q ss_pred eEEEEcC-CCccHHHHHHHHHhcC----------CCCCcEEEcCccHHHHHHhCCC
Q 007311 208 HVLMYCT-GGIRCEMASAYVRSKG----------AGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 208 ~Iv~yCt-gGiR~~~a~~~L~~~~----------~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
-+|+.|. +..|.-..+..||... .=|-+||.|+||..+.-+.+|+
T Consensus 306 aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy~n~p~ 361 (427)
T COG5105 306 ALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFYSNYPD 361 (427)
T ss_pred eEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHhhcCcc
Confidence 6888895 6799999999998641 1367899999999999998886
No 190
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.09 E-value=0.0094 Score=59.47 Aligned_cols=163 Identities=19% Similarity=0.254 Sum_probs=90.1
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeecc
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVA 447 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 447 (608)
+.+.++||+-.|||.....|. .|+..|. .++.++-.|.-+....
T Consensus 27 ~~~~~tiliA~Gf~rrmdh~a----gLA~YL~~NGFhViRyDsl~HvGl------------------------------- 71 (294)
T PF02273_consen 27 PKRNNTILIAPGFARRMDHFA----GLAEYLSANGFHVIRYDSLNHVGL------------------------------- 71 (294)
T ss_dssp ---S-EEEEE-TT-GGGGGGH----HHHHHHHTTT--EEEE---B-----------------------------------
T ss_pred cccCCeEEEecchhHHHHHHH----HHHHHHhhCCeEEEeccccccccC-------------------------------
Confidence 355689999999999999999 8888886 6888888875533220
Q ss_pred CCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEE
Q 007311 448 PDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFA 526 (608)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~v 526 (608)
.+|..+ ++ .......++..+.+++...+ +..+++.-|.-|.+|+..+. ...+.++
T Consensus 72 -------------SsG~I~--ef--tms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~-------~i~lsfL 127 (294)
T PF02273_consen 72 -------------SSGDIN--EF--TMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAA-------DINLSFL 127 (294)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTT-------TS--SEE
T ss_pred -------------CCCChh--hc--chHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhh-------ccCcceE
Confidence 000000 00 01123444444555555544 56789999999999999997 3468888
Q ss_pred EEecCCCCCccc-------------------------------------------------cccCCCCCCEEEEEcCCCC
Q 007311 527 ILCSGFALHSAE-------------------------------------------------FEHRSINCPSLHIFGGDLG 557 (608)
Q Consensus 527 IlisG~~~~~~~-------------------------------------------------~~~~~i~~PvL~i~G~~~~ 557 (608)
|.+-|..-.... .....+.+|++.++++
T Consensus 128 itaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~--- 204 (294)
T PF02273_consen 128 ITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTAN--- 204 (294)
T ss_dssp EEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEET---
T ss_pred EEEeeeeeHHHHHHHHhccchhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeC---
Confidence 887776533210 2346789999999999
Q ss_pred CCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCC
Q 007311 558 NDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTR 593 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~ 593 (608)
+|..|......++.+......+.+... +.+|..-..
T Consensus 205 ~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en 241 (294)
T PF02273_consen 205 DDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN 241 (294)
T ss_dssp T-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS
T ss_pred CCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC
Confidence 899998888888777666655555554 458987553
No 191
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.06 E-value=0.0024 Score=66.19 Aligned_cols=114 Identities=12% Similarity=0.095 Sum_probs=62.8
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPD 449 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 449 (608)
+++.|||+-|.++.--.. .-+..|++.|. ..+.++-+..... +..|...
T Consensus 32 ~~~~llfIGGLtDGl~tv-pY~~~La~aL~~~~wsl~q~~LsSS---------------------------y~G~G~~-- 81 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTV-PYLPDLAEALEETGWSLFQVQLSSS---------------------------YSGWGTS-- 81 (303)
T ss_dssp SSSEEEEE--TT--TT-S-TCHHHHHHHHT-TT-EEEEE--GGG---------------------------BTTS-S---
T ss_pred CCcEEEEECCCCCCCCCC-chHHHHHHHhccCCeEEEEEEecCc---------------------------cCCcCcc--
Confidence 556899999999976431 12237888886 4777777754411 2355441
Q ss_pred CCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhH--hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEE
Q 007311 450 FSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQ--EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAI 527 (608)
Q Consensus 450 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~--~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vI 527 (608)
...+..+.+.+.++||...-.. ....++|+|||-|+.-++.++..........++.++|
T Consensus 82 -------------------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~I 142 (303)
T PF08538_consen 82 -------------------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAI 142 (303)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEE
T ss_pred -------------------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEE
Confidence 1123355677777776655211 2244589999999999999988653211247799999
Q ss_pred EecCCC
Q 007311 528 LCSGFA 533 (608)
Q Consensus 528 lisG~~ 533 (608)
+-++..
T Consensus 143 LQApVS 148 (303)
T PF08538_consen 143 LQAPVS 148 (303)
T ss_dssp EEEE--
T ss_pred EeCCCC
Confidence 966653
No 192
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.05 E-value=0.038 Score=58.65 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=78.0
Q ss_pred cHHHHHHHHHH--HHhHh--CCceEEEecChhHHHHHHHHHHHhhhh-CCCCccEEEEecCCCCCcc----c--------
Q 007311 476 GLDVSLAYLKT--IFSQE--GPFDGILGFSQGAAMAASVCAQWERLK-GEIDFRFAILCSGFALHSA----E-------- 538 (608)
Q Consensus 476 ~l~~s~~~L~~--~i~~~--~~~~~IlGFSQGa~vAl~la~~~~~~~-~~~~l~~vIlisG~~~~~~----~-------- 538 (608)
+--.++.|+.+ .+... ..++.|.|=|-||.+|..+|.+..+.. ....+++.|++.++.-... +
T Consensus 145 D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~ 224 (336)
T KOG1515|consen 145 DGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS 224 (336)
T ss_pred HHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCC
Confidence 44456666665 33332 345679999999999999999876421 3578999999887753211 0
Q ss_pred -------------------------------c-----ccCCCCCC-EEEEEcCCCCCCcccchHHHHHHHHHhccCCc--
Q 007311 539 -------------------------------F-----EHRSINCP-SLHIFGGDLGNDRQVANQASKELAKAFEEGCS-- 579 (608)
Q Consensus 539 -------------------------------~-----~~~~i~~P-vL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~-- 579 (608)
. ......+| +|++..+ .|... +.+...++.++..+.
T Consensus 225 ~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag---~D~L~--D~~~~Y~~~Lkk~Gv~v 299 (336)
T KOG1515|consen 225 PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAG---YDVLR--DEGLAYAEKLKKAGVEV 299 (336)
T ss_pred cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeC---chhhh--hhhHHHHHHHHHcCCeE
Confidence 0 01123344 8888777 78765 456666666665433
Q ss_pred EE-EEeCCCCcCCCC-------hhhHHHHHHHHHHh
Q 007311 580 VI-IEHDCGHIIPTR-------SPYIDEIKSFLQRF 607 (608)
Q Consensus 580 ~v-v~~~gGH~ip~~-------~~~~~~i~~Fl~~~ 607 (608)
++ ++.++.|.+... .+.++.+.+|+.+.
T Consensus 300 ~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 300 TLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred EEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 33 344567863222 12577888888764
No 193
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.04 E-value=0.0033 Score=73.17 Aligned_cols=36 Identities=19% Similarity=0.205 Sum_probs=30.8
Q ss_pred ccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCC
Q 007311 372 KLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAP 411 (608)
Q Consensus 372 ~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP 411 (608)
.+.||++||++.+...|. .+++.|. .+++++.+|.|
T Consensus 449 ~P~VVllHG~~g~~~~~~----~lA~~La~~Gy~VIaiDlp 485 (792)
T TIGR03502 449 WPVVIYQHGITGAKENAL----AFAGTLAAAGVATIAIDHP 485 (792)
T ss_pred CcEEEEeCCCCCCHHHHH----HHHHHHHhCCcEEEEeCCC
Confidence 468999999999999999 6666665 57999999988
No 194
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.01 E-value=0.021 Score=61.00 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=73.3
Q ss_pred CCccEEEEecCCCCChHHHHHHH---HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRT---ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~---~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
...|.||.|||-|---..+-.|+ .++.+.|+ ...++.+|.....+- ..
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~-----------------------~~----- 170 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSD-----------------------EH----- 170 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccc-----------------------cC-----
Confidence 34589999999886655544443 46677777 467788875522110 00
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
+.. | ...+.++++....+++.++ .-..|+|=|-||.+|+.+.....+.......+.
T Consensus 171 ---------------~~~-----y---PtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~ 227 (374)
T PF10340_consen 171 ---------------GHK-----Y---PTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKS 227 (374)
T ss_pred ---------------CCc-----C---chHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCce
Confidence 000 0 1235566666666664555 334689999999999998776554233345689
Q ss_pred EEEecCCCCCc
Q 007311 526 AILCSGFALHS 536 (608)
Q Consensus 526 vIlisG~~~~~ 536 (608)
+|++|+|..+.
T Consensus 228 ~iLISPWv~l~ 238 (374)
T PF10340_consen 228 AILISPWVNLV 238 (374)
T ss_pred eEEECCCcCCc
Confidence 99999998665
No 195
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.96 E-value=0.0026 Score=68.00 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=40.2
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHI 589 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ 589 (608)
....|+||++.+.|+ +|.+.|.+.......++.+ .++++..++||+
T Consensus 325 dL~~It~pvy~~a~~---~DhI~P~~Sv~~g~~l~~g-~~~f~l~~sGHI 370 (445)
T COG3243 325 DLGDITCPVYNLAAE---EDHIAPWSSVYLGARLLGG-EVTFVLSRSGHI 370 (445)
T ss_pred chhhcccceEEEeec---ccccCCHHHHHHHHHhcCC-ceEEEEecCceE
Confidence 356899999999999 8999998888888888887 488888999998
No 196
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.92 E-value=0.0043 Score=65.59 Aligned_cols=174 Identities=14% Similarity=0.058 Sum_probs=102.7
Q ss_pred CCccEEEEecCCCCChHHHHHHHHHHHHHccC-CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCC--ccceeeec
Q 007311 370 RRKLRILCLHGFRQNASSFKGRTASLAKKLKN-IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENC--KKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~-~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~W~~ 446 (608)
.+.|.|++=||.|++.+.|. .+++++.+ ++-|..++-|-.- .++.+ ...... ..-..|++
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~----~~A~~lAs~Gf~Va~~~hpgs~------------~~~~~-~~~~~~~~~~p~~~~e 131 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFA----WLAEHLASYGFVVAAPDHPGSN------------AGGAP-AAYAGPGSYAPAEWWE 131 (365)
T ss_pred CcCCeEEecCCCCCCccchh----hhHHHHhhCceEEEeccCCCcc------------cccCC-hhhcCCcccchhhhhc
Confidence 35678888899999999999 88888875 4444444433110 00000 000000 00113333
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHH-----HhHh--CCceEEEecChhHHHHHHHHHHHhh---
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTI-----FSQE--GPFDGILGFSQGAAMAASVCAQWER--- 516 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~-----i~~~--~~~~~IlGFSQGa~vAl~la~~~~~--- 516 (608)
+..++...+.+|.+. +... ...++++|||.||..++.++-....
T Consensus 132 --------------------------rp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~ 185 (365)
T COG4188 132 --------------------------RPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEA 185 (365)
T ss_pred --------------------------ccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHH
Confidence 345677778888777 2221 2345799999999999987653211
Q ss_pred -----h-------------------------------hCCCCccEEEEecCCCCCc-cccccCCCCCCEEEEEcCCCCCC
Q 007311 517 -----L-------------------------------KGEIDFRFAILCSGFALHS-AEFEHRSINCPSLHIFGGDLGND 559 (608)
Q Consensus 517 -----~-------------------------------~~~~~l~~vIlisG~~~~~-~~~~~~~i~~PvL~i~G~~~~~D 559 (608)
. ....+++.+|.+.+..... ......++..|++++.|. .|
T Consensus 186 ~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s---~D 262 (365)
T COG4188 186 LLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGS---AD 262 (365)
T ss_pred HHHHhhhhhhcccCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccccccceeeecceeeeccc---cc
Confidence 0 0124577777777665432 234567899999999999 77
Q ss_pred cccchH-HHHHHHHHhccC-CcEEEEeCCCCc
Q 007311 560 RQVANQ-ASKELAKAFEEG-CSVIIEHDCGHI 589 (608)
Q Consensus 560 ~~Vp~~-~~~~l~~~~~~~-~~~vv~~~gGH~ 589 (608)
...|.. ...+....++.. .....+.++.|.
T Consensus 263 ~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~ 294 (365)
T COG4188 263 GFAPPVTEQIRPFGYLPGALKYLRLVPGATHF 294 (365)
T ss_pred ccCCcccccccccccCCcchhheeecCCCccc
Confidence 755543 233344455542 235556677886
No 197
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.84 E-value=0.015 Score=64.51 Aligned_cols=88 Identities=16% Similarity=0.264 Sum_probs=62.7
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc-------ccccCCCCCCEEEEEcCCCCCCcccchHHH
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA-------EFEHRSINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~-------~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
..|+|+|||+.|+..++... +...+.++|.++ |+.... ++..-.++.|+|+|-|. +|...+....
T Consensus 252 IiLvGrsmGAlVachVSpsn----sdv~V~~vVCig-ypl~~vdgprgirDE~Lldmk~PVLFV~Gs---nd~mcspn~M 323 (784)
T KOG3253|consen 252 IILVGRSMGALVACHVSPSN----SDVEVDAVVCIG-YPLDTVDGPRGIRDEALLDMKQPVLFVIGS---NDHMCSPNSM 323 (784)
T ss_pred eEEEecccCceeeEEecccc----CCceEEEEEEec-ccccCCCcccCCcchhhHhcCCceEEEecC---CcccCCHHHH
Confidence 36899999988888877632 234477776665 333222 13345788999999999 8999999999
Q ss_pred HHHHHHhccCCcEEEEe-CCCCcCC
Q 007311 568 KELAKAFEEGCSVIIEH-DCGHIIP 591 (608)
Q Consensus 568 ~~l~~~~~~~~~~vv~~-~gGH~ip 591 (608)
+.+.+..... .++++. .++|.+-
T Consensus 324 E~vreKMqA~-~elhVI~~adhsma 347 (784)
T KOG3253|consen 324 EEVREKMQAE-VELHVIGGADHSMA 347 (784)
T ss_pred HHHHHHhhcc-ceEEEecCCCcccc
Confidence 9999888765 445444 4589753
No 198
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.67 E-value=0.006 Score=61.95 Aligned_cols=64 Identities=27% Similarity=0.383 Sum_probs=49.7
Q ss_pred CCCC-CCEEEEEcCCCCCCcccchHHHHHHHHHhcc-CCcEEEEeCCCCcCCC--Ch---hhHHHHHHHHHHhC
Q 007311 542 RSIN-CPSLHIFGGDLGNDRQVANQASKELAKAFEE-GCSVIIEHDCGHIIPT--RS---PYIDEIKSFLQRFL 608 (608)
Q Consensus 542 ~~i~-~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~-~~~~vv~~~gGH~ip~--~~---~~~~~i~~Fl~~~L 608 (608)
..+. +|+|++||. +|.+||...+..+.+.... ....++..+++|.... .+ ...+++.+|+.+.|
T Consensus 228 ~~i~~~P~l~~~G~---~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 228 EKISPRPVLLVHGE---RDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred hhcCCcceEEEecC---CCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 3445 899999998 8999999999999998887 4455556677898663 22 36788999998764
No 199
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.67 E-value=0.0094 Score=67.80 Aligned_cols=160 Identities=16% Similarity=0.165 Sum_probs=90.7
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccC
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAP 448 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 448 (608)
+...-.+||++|..++-.. .++++..- .-+|-++|++-.... .....+.||...
T Consensus 86 elsGIPVLFIPGNAGSyKQ----vRSiAS~a----~n~y~~~~~e~t~~~------------------d~~~~~DFFaVD 139 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQ----VRSIASVA----QNAYQGGPFEKTEDR------------------DNPFSFDFFAVD 139 (973)
T ss_pred cCCCceEEEecCCCCchHH----HHHHHHHH----hhhhcCCchhhhhcc------------------cCccccceEEEc
Confidence 3455679999998888754 44777653 336777776533110 012356787732
Q ss_pred CCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCc-------eEEEecChhHHHHHHHHHHHhhhhCCC
Q 007311 449 DFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPF-------DGILGFSQGAAMAASVCAQWERLKGEI 521 (608)
Q Consensus 449 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~-------~~IlGFSQGa~vAl~la~~~~~~~~~~ 521 (608)
..+++ ..++..-.+.|++-.-+++.++......+.++ ++|+||||||+||..++.... ..+.
T Consensus 140 -----FnEe~----tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn--~~~~ 208 (973)
T KOG3724|consen 140 -----FNEEF----TAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKN--EVQG 208 (973)
T ss_pred -----ccchh----hhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhh--hccc
Confidence 12222 22333334566777777777777777662222 368999999999998876431 1133
Q ss_pred CccEEEEecCCC---CCccc--------------------cccC-CCCCCEEEEEcCCCCCCcccchHHH
Q 007311 522 DFRFAILCSGFA---LHSAE--------------------FEHR-SINCPSLHIFGGDLGNDRQVANQAS 567 (608)
Q Consensus 522 ~l~~vIlisG~~---~~~~~--------------------~~~~-~i~~PvL~i~G~~~~~D~~Vp~~~~ 567 (608)
.+.-+|..|... |...+ .+.. ...+-++-|.|.- .|.+||.+.+
T Consensus 209 sVntIITlssPH~a~Pl~~D~~l~~fy~~vnn~W~k~~~~~~~~~ls~V~vVSisGG~--~Dy~V~se~s 276 (973)
T KOG3724|consen 209 SVNTIITLSSPHAAPPLPLDRFLLRFYLLVNNYWNKLQNNNSDPLLSHVGVVSISGGI--RDYQVPSELS 276 (973)
T ss_pred hhhhhhhhcCcccCCCCCCcHHHHHHHHHHHHHHHHHHhccccchhcceEEEEEecCc--cccccCcchh
Confidence 444455555432 11111 0111 2334466677763 8999986543
No 200
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=96.43 E-value=0.017 Score=62.69 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=41.4
Q ss_pred CCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE-E-EeCCCCc-----CCCChhhHHHHHHHHHHh
Q 007311 542 RSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI-I-EHDCGHI-----IPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 542 ~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v-v-~~~gGH~-----ip~~~~~~~~i~~Fl~~~ 607 (608)
..+.+|+.+.+|. +|-.+.++..+++...+.+..... + ..+-.|. .-......+.|.+.++.+
T Consensus 329 ~~i~~P~~l~~g~---~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 329 TNIKVPTALYYGD---NDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred cccccCEEEEecC---CcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 4578999999999 899999999998877776642211 1 1223554 111234667777777643
No 201
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.41 E-value=0.036 Score=65.21 Aligned_cols=125 Identities=18% Similarity=0.140 Sum_probs=82.4
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc----------------
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------- 538 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------- 538 (608)
.+...+++++.+..-.+....+|+|+|-||-|++.++...+ ..-++..|++++..-...-
T Consensus 590 ~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~----~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~ 665 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP----GDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSEND 665 (755)
T ss_pred HHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc----CceEEEEEEecceeeeeeecccccHhhcCCCcccc
Confidence 34444555444443223445689999999999999888431 1335555777766533210
Q ss_pred ---------cccCCCCCCE-EEEEcCCCCCCcccchHHHHHHHHHhccCC--cEEEE-eCCCCcCCCCh---hhHHHHHH
Q 007311 539 ---------FEHRSINCPS-LHIFGGDLGNDRQVANQASKELAKAFEEGC--SVIIE-HDCGHIIPTRS---PYIDEIKS 602 (608)
Q Consensus 539 ---------~~~~~i~~Pv-L~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~vv~-~~gGH~ip~~~---~~~~~i~~ 602 (608)
.....++.|. |++||+ .|..|+.+.+.++.+.+...+ ...++ .+-.|.+-... .....+..
T Consensus 666 ~~y~e~~~~~~~~~~~~~~~LliHGt---~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~ 742 (755)
T KOG2100|consen 666 KGYEESSVSSPANNIKTPKLLLIHGT---EDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDR 742 (755)
T ss_pred chhhhccccchhhhhccCCEEEEEcC---CcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHH
Confidence 1234567777 999999 899999999999999998643 33344 45699975543 35677888
Q ss_pred HHHH
Q 007311 603 FLQR 606 (608)
Q Consensus 603 Fl~~ 606 (608)
||..
T Consensus 743 ~~~~ 746 (755)
T KOG2100|consen 743 FLRD 746 (755)
T ss_pred HHHH
Confidence 8864
No 202
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.40 E-value=0.13 Score=53.06 Aligned_cols=178 Identities=24% Similarity=0.335 Sum_probs=98.6
Q ss_pred CCccEEEEecCCCCChHH-HHHHH--HHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeec
Q 007311 370 RRKLRILCLHGFRQNASS-FKGRT--ASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFV 446 (608)
Q Consensus 370 ~~~~~iLlLHG~G~na~~-f~~~~--~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 446 (608)
..||+||-.|-.|-|... |.+.+ ... +.+.+.+-++-|||| +.. . +
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m-~~i~~~f~i~Hi~aP--------Gqe-----~------------g----- 69 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDM-QEILQNFCIYHIDAP--------GQE-----E------------G----- 69 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHH-HHHHTTSEEEEEE-T--------TTS-----T------------T-----
T ss_pred CCCceEEEeccccccchHHHHHHhcchhH-HHHhhceEEEEEeCC--------CCC-----C------------C-----
Confidence 468999999999999987 76443 122 233356899999999 110 0 0
Q ss_pred cCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccE
Q 007311 447 APDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRF 525 (608)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~ 525 (608)
.+--+.+| +.+.+++..+.|..+++..+- ..+-+|=--||.|-+.+|+.+ +..+-|
T Consensus 70 ----------------a~~~p~~y--~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~-----p~~V~G 126 (283)
T PF03096_consen 70 ----------------AATLPEGY--QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKH-----PERVLG 126 (283)
T ss_dssp ---------------------TT-------HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHS-----GGGEEE
T ss_pred ----------------cccccccc--cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccC-----ccceeE
Confidence 00001111 345677777778888877663 334467778888888888844 567899
Q ss_pred EEEecCCCCCcc--c-----------------------------------------------------------------
Q 007311 526 AILCSGFALHSA--E----------------------------------------------------------------- 538 (608)
Q Consensus 526 vIlisG~~~~~~--~----------------------------------------------------------------- 538 (608)
+|+++.-..... +
T Consensus 127 LiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~ 206 (283)
T PF03096_consen 127 LILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYN 206 (283)
T ss_dssp EEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999775442211 0
Q ss_pred ------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEe-CCCCcCCCChh--hHHHHHHHHHH
Q 007311 539 ------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEH-DCGHIIPTRSP--YIDEIKSFLQR 606 (608)
Q Consensus 539 ------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~-~gGH~ip~~~~--~~~~i~~Fl~~ 606 (608)
.......||+|++.|+ .-+.+ +.+.++.+.+....+.++.- +.|=.+-.+.| ..+++.=||+.
T Consensus 207 ~R~DL~~~~~~~~c~vLlvvG~---~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 207 SRTDLSIERPSLGCPVLLVVGD---NSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp T-----SECTTCCS-EEEEEET---TSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred ccccchhhcCCCCCCeEEEEec---CCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 1234567999999998 55543 56778888888765666554 55554433222 45666666653
No 203
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.34 E-value=0.02 Score=59.38 Aligned_cols=34 Identities=24% Similarity=0.110 Sum_probs=26.1
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCC-CCccEEEEecCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGE-IDFRFAILCSGF 532 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~-~~l~~vIlisG~ 532 (608)
..++||||||.++=.++.+- .. ++++-+|.++|.
T Consensus 96 ~naIGfSQGGlflRa~ierc----~~~p~V~nlISlggp 130 (314)
T PLN02633 96 YNIVGRSQGNLVARGLIEFC----DGGPPVYNYISLAGP 130 (314)
T ss_pred EEEEEEccchHHHHHHHHHC----CCCCCcceEEEecCC
Confidence 36999999999988777643 33 578888887765
No 204
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.27 E-value=0.02 Score=57.83 Aligned_cols=51 Identities=22% Similarity=0.202 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+.+.+.+. .+.+...=..++|+||||.+|=.++.. +...+++-.|.++|.
T Consensus 77 v~~~ce~v~-~m~~lsqGynivg~SQGglv~Raliq~----cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 77 VDVACEKVK-QMPELSQGYNIVGYSQGGLVARALIQF----CDNPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHh-cchhccCceEEEEEccccHHHHHHHHh----CCCCCcceeEeccCC
Confidence 334444444 333333334699999999998877764 334677777877764
No 205
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.22 E-value=0.048 Score=53.27 Aligned_cols=41 Identities=17% Similarity=0.152 Sum_probs=29.9
Q ss_pred CCCccEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEec
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFID 409 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~d 409 (608)
..+-|+++.|-|..-+.++|..+-..-..+-..+..+|+||
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PD 81 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPD 81 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCC
Confidence 35568999999999999999977644444434556677666
No 206
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.22 E-value=0.011 Score=66.15 Aligned_cols=57 Identities=23% Similarity=0.151 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...+++|+.+.|..- ...+.|+|+|.||.+++.++.... ....++++|+.||...
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~---~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPD---SKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcc---hhHHHHHHhhhcCCcc
Confidence 46778899999998874 345679999999999988877421 2345888999998764
No 207
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.07 E-value=0.019 Score=59.05 Aligned_cols=52 Identities=13% Similarity=0.115 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 477 LDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
+.+.++.+.+.+.... .=..++||||||.+.=.++.+ +...+++-+|.++|.
T Consensus 61 v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~----c~~~~V~nlISlggp 115 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQR----CNDPPVHNLISLGGP 115 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-----TSS-EEEEEEES--
T ss_pred HHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHH----CCCCCceeEEEecCc
Confidence 3444555555555432 223589999999988777765 335678889998865
No 208
>PLN02606 palmitoyl-protein thioesterase
Probab=96.05 E-value=0.042 Score=57.04 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=25.5
Q ss_pred eEEEecChhHHHHHHHHHHHhhhhCC-CCccEEEEecCC
Q 007311 495 DGILGFSQGAAMAASVCAQWERLKGE-IDFRFAILCSGF 532 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~~~~~~-~~l~~vIlisG~ 532 (608)
..++||||||.++=.++.+- .. ++++-+|.++|.
T Consensus 97 ~naIGfSQGglflRa~ierc----~~~p~V~nlISlggp 131 (306)
T PLN02606 97 YNIVAESQGNLVARGLIEFC----DNAPPVINYVSLGGP 131 (306)
T ss_pred eEEEEEcchhHHHHHHHHHC----CCCCCcceEEEecCC
Confidence 36899999999987777643 23 578888887754
No 209
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.05 E-value=0.11 Score=51.56 Aligned_cols=36 Identities=25% Similarity=0.187 Sum_probs=27.6
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
.+.|++||||-.+|..+.. ..+++..|+++|.+-+.
T Consensus 58 ~i~lvAWSmGVw~A~~~l~-------~~~~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 58 EIYLVAWSMGVWAANRVLQ-------GIPFKRAIAINGTPYPI 93 (213)
T ss_pred eEEEEEEeHHHHHHHHHhc-------cCCcceeEEEECCCCCc
Confidence 3479999999999887654 24678889998877554
No 210
>COG0627 Predicted esterase [General function prediction only]
Probab=95.86 E-value=0.093 Score=55.30 Aligned_cols=107 Identities=20% Similarity=0.130 Sum_probs=69.0
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc---------cc--------------------------
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS---------AE-------------------------- 538 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~---------~~-------------------------- 538 (608)
...|+|+||||.=|+.+|+.. +..++.+..+||...+. ..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~-----pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~ 227 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKH-----PDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLS 227 (316)
T ss_pred CceeEEEeccchhhhhhhhhC-----cchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchh
Confidence 347999999999999999954 46688888888877665 21
Q ss_pred -ccc--CC----------CCCCEEEEEcCCCCCCcccc--hHHHHHHHHHhccC--CcEEEEe-CCCCcCCCChhhHHHH
Q 007311 539 -FEH--RS----------INCPSLHIFGGDLGNDRQVA--NQASKELAKAFEEG--CSVIIEH-DCGHIIPTRSPYIDEI 600 (608)
Q Consensus 539 -~~~--~~----------i~~PvL~i~G~~~~~D~~Vp--~~~~~~l~~~~~~~--~~~vv~~-~gGH~ip~~~~~~~~i 600 (608)
.+. .. ...+.+.-.|. .|.... ....+.+.+.+... ...+..+ +++|....-...+.+.
T Consensus 228 ~~~~l~~~~~~~~~~~~~~~~~~~~d~g~---ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w~~~l~~~ 304 (316)
T COG0627 228 LIEKLVANANTRIWVYGGSPPELLIDNGP---ADFFLAANNLSTRAFAEALRAAGIPNGVRDQPGGDHSWYFWASQLADH 304 (316)
T ss_pred HHHHhhhcccccceecccCCCcccccccc---chhhhhhcccCHHHHHHHHHhcCCCceeeeCCCCCcCHHHHHHHHHHH
Confidence 000 11 33445555776 676653 22345566666532 2444555 6689876666788888
Q ss_pred HHHHHHhC
Q 007311 601 KSFLQRFL 608 (608)
Q Consensus 601 ~~Fl~~~L 608 (608)
..|+...|
T Consensus 305 ~~~~a~~l 312 (316)
T COG0627 305 LPWLAGAL 312 (316)
T ss_pred HHHHHHHh
Confidence 88887653
No 211
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=95.85 E-value=0.026 Score=59.99 Aligned_cols=42 Identities=12% Similarity=-0.123 Sum_probs=30.3
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcc
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSA 537 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~ 537 (608)
....|+|||+||-||-.++..... ...++.++.+-++.|...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~---~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKG---GGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT------SSEEEEES-B-TTTT
T ss_pred hHEEEEeeccchhhhhhhhhhccC---cceeeEEEecCccccccc
Confidence 345799999999999999987642 357899999998887654
No 212
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=95.79 E-value=0.014 Score=58.30 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~ 512 (608)
..+..+++.+++...+..+-|+|||||++||-.+..
T Consensus 59 ~~~l~~fI~~Vl~~TGakVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 59 AKQLRAFIDAVLAYTGAKVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHHHHHHHHHHT--EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCEEEEEEcCCcCHHHHHHHH
Confidence 344455555555556666679999999999988876
No 213
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=95.70 E-value=0.036 Score=55.24 Aligned_cols=26 Identities=19% Similarity=0.379 Sum_probs=19.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK 400 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~ 400 (608)
+.+.|||+||+++|..+|. .+...+.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~----~~~~~l~ 28 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMR----YLKNHLE 28 (217)
T ss_pred CCEEEEEeCCCCCCHHHHH----HHHHHHH
Confidence 3467999999999999998 5544443
No 214
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.53 E-value=0.59 Score=47.09 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=38.1
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCCC
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~~ 593 (608)
.+-+-..+|+ +|..+|.+....+++.+++.+..+-+-+..|.+-..
T Consensus 242 ~d~l~Fyygt---~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~ 287 (301)
T KOG3975|consen 242 LDSLWFYYGT---NDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVK 287 (301)
T ss_pred CcEEEEEccC---CCCCcchHHHHHHhhhcchhceeeccccCCcceeec
Confidence 4556778999 899999999999999999877887777779986553
No 215
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=95.52 E-value=1 Score=46.53 Aligned_cols=112 Identities=24% Similarity=0.239 Sum_probs=69.1
Q ss_pred CCCCCCccEEEEecCCCCChHH-HHHHH--HHHHHHccCCcEEEEecCC-ccCCccccCCCcccccCCCCCCCCCCCccc
Q 007311 366 GIVCRRKLRILCLHGFRQNASS-FKGRT--ASLAKKLKNIAEFVFIDAP-HELPFIYQTSNVSSVIQNGPPPPSENCKKR 441 (608)
Q Consensus 366 ~~~~~~~~~iLlLHG~G~na~~-f~~~~--~~L~~~L~~~~~~v~~daP-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (608)
+.....|++||-.|..|-|... |.+.+ ...+..+ .++-++-|++| ++..
T Consensus 40 Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~fcv~HV~~PGqe~g-------------------------- 92 (326)
T KOG2931|consen 40 GDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EHFCVYHVDAPGQEDG-------------------------- 92 (326)
T ss_pred cCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHH-hheEEEecCCCccccC--------------------------
Confidence 3333467889999999999977 66443 1222222 24888999988 1100
Q ss_pred eeeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCce-EEEecChhHHHHHHHHHHHhhhhCC
Q 007311 442 FAWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFD-GILGFSQGAAMAASVCAQWERLKGE 520 (608)
Q Consensus 442 ~~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~-~IlGFSQGa~vAl~la~~~~~~~~~ 520 (608)
.+.+ +.+| +.+.+++..+.|..+++..+-.. +=+|---||.+-+.+|+ ..+
T Consensus 93 -----Ap~~----------------p~~y--~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl-----~hp 144 (326)
T KOG2931|consen 93 -----APSF----------------PEGY--PYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFAL-----NHP 144 (326)
T ss_pred -----CccC----------------CCCC--CCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHh-----cCh
Confidence 0000 0111 24567777777778877665432 23466677778888887 446
Q ss_pred CCccEEEEecCC
Q 007311 521 IDFRFAILCSGF 532 (608)
Q Consensus 521 ~~l~~vIlisG~ 532 (608)
.++-|+|+++.-
T Consensus 145 ~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 145 ERVLGLVLINCD 156 (326)
T ss_pred hheeEEEEEecC
Confidence 789999997744
No 216
>PRK14429 acylphosphatase; Provisional
Probab=95.52 E-value=0.031 Score=47.74 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-..| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 70 (90)
T PRK14429 16 GCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVGVPCTEVL 70 (90)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEEE
Confidence 3688999999999999999999999 99999999999999999999888776543
No 217
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=95.49 E-value=0.037 Score=47.26 Aligned_cols=52 Identities=29% Similarity=0.364 Sum_probs=46.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCC
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEG 78 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~ 78 (608)
-+|.+.+..+.++||+|-|+=..+| |-+.+.|+.+.+++|+++|++.|..+.
T Consensus 18 gFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~a~ 70 (91)
T PF00708_consen 18 GFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPPAR 70 (91)
T ss_dssp SHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTTSE
T ss_pred ChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCCcE
Confidence 4789999999999999999999999 999999999999999999999776653
No 218
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.44 E-value=0.071 Score=46.60 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC--ChhhHHHHHHHHHH
Q 007311 543 SINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT--RSPYIDEIKSFLQR 606 (608)
Q Consensus 543 ~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~--~~~~~~~i~~Fl~~ 606 (608)
....|+|++.++ .|++.|.+.++++++.+.+. +.+...+.||.+-. ..-..+.+.+||..
T Consensus 32 ~~~~piL~l~~~---~Dp~TP~~~a~~~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 32 PGAPPILVLGGT---HDPVTPYEGARAMAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCCEEEEecC---cCCCCcHHHHHHHHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 345999999999 99999999999999999973 55555666998752 23366777788863
No 219
>PRK14448 acylphosphatase; Provisional
Probab=95.40 E-value=0.041 Score=46.98 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-++| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 69 (90)
T PRK14448 16 GFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQHGPPTAVV 69 (90)
T ss_pred chHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHHhCCCceEE
Confidence 4789999999999999999999999 9999999999999999999988887644
No 220
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=95.35 E-value=0.18 Score=52.13 Aligned_cols=83 Identities=22% Similarity=0.238 Sum_probs=60.2
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccccccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE 575 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~ 575 (608)
.|+|||.||+.++..... ..+|+..|++-+|.-+..+....+++-|+|.|.-+ |=+.+ +.-.-+++.+.
T Consensus 244 aViGHSFGgAT~i~~ss~------~t~FrcaI~lD~WM~Pl~~~~~~~arqP~~finv~----~fQ~~-en~~vmKki~~ 312 (399)
T KOG3847|consen 244 AVIGHSFGGATSIASSSS------HTDFRCAIALDAWMFPLDQLQYSQARQPTLFINVE----DFQWN-ENLLVMKKIES 312 (399)
T ss_pred hheeccccchhhhhhhcc------ccceeeeeeeeeeecccchhhhhhccCCeEEEEcc----cccch-hHHHHHHhhhC
Confidence 389999999988876652 45799999999999888777778999999999865 55543 44444555555
Q ss_pred c-CCcEEEEeCC-CCc
Q 007311 576 E-GCSVIIEHDC-GHI 589 (608)
Q Consensus 576 ~-~~~~vv~~~g-GH~ 589 (608)
+ ....+++.+| =|.
T Consensus 313 ~n~g~~~it~~GsVHq 328 (399)
T KOG3847|consen 313 QNEGNHVITLDGSVHQ 328 (399)
T ss_pred CCccceEEEEccceec
Confidence 3 2456666665 354
No 221
>PRK14420 acylphosphatase; Provisional
Probab=95.24 E-value=0.043 Score=46.90 Aligned_cols=53 Identities=23% Similarity=0.319 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-..| |=..+.|+.+++++|+++|++.|.++.+
T Consensus 16 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~p~~a~V 69 (91)
T PRK14420 16 GFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKGSPFSKV 69 (91)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhCCCCCEE
Confidence 3688999999999999999999999 9999999999999999999988877754
No 222
>PRK14430 acylphosphatase; Provisional
Probab=95.16 E-value=0.046 Score=46.87 Aligned_cols=53 Identities=23% Similarity=0.221 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..|+|+|-|+=-+.| |-.-+.|+.++++.|+++|+..|.++.+
T Consensus 18 GFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (92)
T PRK14430 18 GYRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWMEAGPPAAQV 71 (92)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999888877644
No 223
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=95.16 E-value=0.075 Score=45.52 Aligned_cols=52 Identities=23% Similarity=0.294 Sum_probs=48.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCC
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEG 78 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~ 78 (608)
.+|.+.+..+.+|||+|.|+-=..| |-+-+.|+.+++++|++||+..|.++.
T Consensus 18 GFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~~g~~~a~ 70 (92)
T COG1254 18 GFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLRKGPPAAK 70 (92)
T ss_pred cHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHHhCCCceE
Confidence 4789999999999999999999999 999999999999999999998777763
No 224
>PRK14447 acylphosphatase; Provisional
Probab=95.15 E-value=0.044 Score=47.27 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC--cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG--VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG--iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-+.| |-+.+.|+.+++++|+++|++.|.++.++
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~~gp~~a~V~ 73 (95)
T PRK14447 18 FFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWARVGPPGARVE 73 (95)
T ss_pred cchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCeEEE
Confidence 4788999999999999999999999 99999999999999999999888777543
No 225
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.10 E-value=0.16 Score=47.32 Aligned_cols=65 Identities=17% Similarity=-0.044 Sum_probs=43.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc----ccCCCCCCEEEEEcCCCCCCccc
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF----EHRSINCPSLHIFGGDLGNDRQV 562 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~----~~~~i~~PvL~i~G~~~~~D~~V 562 (608)
...|.||||||+||..++....... ......++.+++..+..... ........+..++.. .|.+.
T Consensus 29 ~i~v~GHSlGg~lA~l~a~~~~~~~-~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~~---~D~v~ 97 (153)
T cd00741 29 KIHVTGHSLGGALAGLAGLDLRGRG-LGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVND---NDIVP 97 (153)
T ss_pred eEEEEEcCHHHHHHHHHHHHHHhcc-CCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEEC---CCccC
Confidence 3468999999999999998764211 23455677777766544321 233445678888888 67663
No 226
>PRK14449 acylphosphatase; Provisional
Probab=95.08 E-value=0.06 Score=45.97 Aligned_cols=53 Identities=19% Similarity=0.195 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-.+| |=..+.|+.+++++|+++|++.|.++.+
T Consensus 17 GFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~~~~~a~V 70 (90)
T PRK14449 17 GLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKTGLRWARV 70 (90)
T ss_pred ChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999998766643
No 227
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=94.98 E-value=0.078 Score=48.77 Aligned_cols=83 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccc-c---------CCCCccccCcccccCCCc-hHHH
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGK-F---------RTPSVETLDPEIRQFSDL-PTWI 197 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh-~---------~g~~~~~l~~~~~~~~~~-~~~~ 197 (608)
+..++++++..+-+.+ =..|||.|...|.+.-. . .|.. .++.++.. ..+ ++.+
T Consensus 12 s~qlt~~d~~~L~~~G-------------iktVIdlR~~~E~~~~p~~~~~~~~a~~~gl~--y~~iPv~~-~~~~~~~v 75 (135)
T TIGR01244 12 SPQLTKADAAQAAQLG-------------FKTVINNRPDREEESQPDFAQIKAAAEAAGVT--YHHQPVTA-GDITPDDV 75 (135)
T ss_pred cCCCCHHHHHHHHHCC-------------CcEEEECCCCCCCCCCCCHHHHHHHHHHCCCe--EEEeecCC-CCCCHHHH
Confidence 5678999998875542 35799999987743210 0 1211 22222111 111 1222
Q ss_pred Hh---hhhhcCCCeEEEEcCCCccHHHHHHHHHh
Q 007311 198 DN---NAEQLQGKHVLMYCTGGIRCEMASAYVRS 228 (608)
Q Consensus 198 ~~---~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~ 228 (608)
.. ..+ ..+++|++||++|.|+..+.+++..
T Consensus 76 ~~f~~~~~-~~~~pvL~HC~sG~Rt~~l~al~~~ 108 (135)
T TIGR01244 76 ETFRAAIG-AAEGPVLAYCRSGTRSSLLWGFRQA 108 (135)
T ss_pred HHHHHHHH-hCCCCEEEEcCCChHHHHHHHHHHH
Confidence 22 122 2468999999999999988776554
No 228
>PRK14422 acylphosphatase; Provisional
Probab=94.98 E-value=0.062 Score=46.17 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=49.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-+.| |-.-+.|+.+++++|+++|++.|.++.++
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V~ 74 (93)
T PRK14422 20 GFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRGDDTPGRVD 74 (93)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888877543
No 229
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=94.94 E-value=0.84 Score=48.15 Aligned_cols=129 Identities=22% Similarity=0.233 Sum_probs=70.3
Q ss_pred cHHHHHHHHHHHHhH--hC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe-cCCCCCccc-----------
Q 007311 476 GLDVSLAYLKTIFSQ--EG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC-SGFALHSAE----------- 538 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~--~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli-sG~~~~~~~----------- 538 (608)
++-.+.+.+.+.+.+ .| ...++.|||.||+|++.++. .+...+...++.+++- .++......
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~-~~~~~~~dgi~~~~ikDRsfssl~~vas~~~~~~~~~ 271 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALK-KEVLKGSDGIRWFLIKDRSFSSLAAVASQFFGPIGKL 271 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHH-hcccccCCCeeEEEEecCCcchHHHHHHHHHHHHHHH
Confidence 344444444444432 22 23467899999999997443 3322333346644443 344433211
Q ss_pred ------------cccCCCCCCEEEEEcCCC----CCCcccchHHHHHHHHHhcc-CC------cE--EEEeCCCCcCCCC
Q 007311 539 ------------FEHRSINCPSLHIFGGDL----GNDRQVANQASKELAKAFEE-GC------SV--IIEHDCGHIIPTR 593 (608)
Q Consensus 539 ------------~~~~~i~~PvL~i~G~~~----~~D~~Vp~~~~~~l~~~~~~-~~------~~--vv~~~gGH~ip~~ 593 (608)
.....+.+|-+++|+... ..|..++.+.. ++..|.+ .. .. +-.+.-.|.-|..
T Consensus 272 l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~~~~~~~~~~Ki~i~~~~l~H~~~L~ 349 (365)
T PF05677_consen 272 LIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDPPTAEKLSGKKIPIGERLLLHNEPLD 349 (365)
T ss_pred HHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCCcccccccccceecccccccccccCC
Confidence 235678899999999821 11444433222 3333322 11 12 2233447888888
Q ss_pred hhhHHHHHHHHHHh
Q 007311 594 SPYIDEIKSFLQRF 607 (608)
Q Consensus 594 ~~~~~~i~~Fl~~~ 607 (608)
.+.++.++.-+.+.
T Consensus 350 ~~~~~~la~~I~~~ 363 (365)
T PF05677_consen 350 DETIQALAEHILDH 363 (365)
T ss_pred hHHHHHHHHHHHhh
Confidence 78888888877664
No 230
>PRK14436 acylphosphatase; Provisional
Probab=94.93 E-value=0.065 Score=45.86 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-.+| |-.-+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (91)
T PRK14436 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARVT 72 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhhCCCceEEE
Confidence 4788999999999999999999999 99999999999999999999888776543
No 231
>PRK14435 acylphosphatase; Provisional
Probab=94.91 E-value=0.062 Score=45.89 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=48.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-++| |-..+.|+.+++++|+++|++.|.++.+
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 69 (90)
T PRK14435 16 GFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVAKGPPAAVV 69 (90)
T ss_pred CChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 3688899999999999999999999 9999999999999999999988887644
No 232
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]
Probab=94.89 E-value=0.069 Score=54.53 Aligned_cols=104 Identities=25% Similarity=0.210 Sum_probs=66.7
Q ss_pred ccCHHHHHHHHHccCCCccccccCCCCCcEEEec--------CC-hhhhhccccCCCCccccCcccccC----CCchH--
Q 007311 131 HLSAVEFHSILQSTGQVLDKENATDDKKLVLLDA--------RN-LYETRIGKFRTPSVETLDPEIRQF----SDLPT-- 195 (608)
Q Consensus 131 ~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDv--------Rn-~~E~~~Gh~~g~~~~~l~~~~~~~----~~~~~-- 195 (608)
-++++-+++++.+ .++++||. |+ ..||..-||+|+...-++.-...- ..+|.
T Consensus 6 iv~~~~v~~~~~~-------------~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e 72 (286)
T KOG1529|consen 6 IVSVKWVMENLGN-------------HGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAE 72 (286)
T ss_pred ccChHHHHHhCcC-------------CCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHH
Confidence 3566666776654 46889986 33 578888899996532222110000 12332
Q ss_pred HHHh---hhhhcCCCeEEEEcC--CCccHHHHHH-HHHhcCCCCCcEEEcCccHHHHHHh
Q 007311 196 WIDN---NAEQLQGKHVLMYCT--GGIRCEMASA-YVRSKGAGFENVFQLYGGIQRYLEQ 249 (608)
Q Consensus 196 ~~~~---~~~~~k~k~Iv~yCt--gGiR~~~a~~-~L~~~~~Gf~nV~~L~GGi~~w~~~ 249 (608)
.+++ .+....+..+|+|-+ +|+-+.--+. .++-. |+++|+-|.||+.+|++.
T Consensus 73 ~Fa~y~~~lGi~n~d~vViYd~~~~Gm~~Asrv~W~fr~f--Gh~~VslL~GG~~~Wk~~ 130 (286)
T KOG1529|consen 73 HFAEYASRLGVDNGDHVVIYDRGDGGMFSASRVWWTFRVF--GHTKVSLLNGGFRAWKAA 130 (286)
T ss_pred HHHHHHHhcCCCCCCeEEEEcCCCcceeehhhHHHHHHHh--CccEEEEecCcHHHHHHc
Confidence 1121 234567889999999 8876554444 56654 999999999999999985
No 233
>PRK14433 acylphosphatase; Provisional
Probab=94.88 E-value=0.065 Score=45.46 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++..++|.|-|+=-++| |-..+.|+.+++++|+++|++.|.++.+
T Consensus 15 GFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V 68 (87)
T PRK14433 15 GYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLRRGPRHARV 68 (87)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 3688999999999999999999999 9999999999999999999988887654
No 234
>PRK14450 acylphosphatase; Provisional
Probab=94.85 E-value=0.071 Score=45.62 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC--cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG--VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG--iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-.+| |=.-+.|+.++++.|+++|++.|.++.++
T Consensus 16 GFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~~gp~~a~V~ 71 (91)
T PRK14450 16 YFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLRSGPPRAEVK 71 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCcEEE
Confidence 4788999999999999999999999 88899999999999999999888887543
No 235
>PRK14426 acylphosphatase; Provisional
Probab=94.85 E-value=0.063 Score=46.02 Aligned_cols=54 Identities=20% Similarity=0.229 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhC-CCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSI-SLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~-~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-++| |-..+.|+.++++.|+++|++. |.++.++
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g~P~~a~V~ 73 (92)
T PRK14426 18 GFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLKEGGPRSARVD 73 (92)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHhcCCCCCeEEE
Confidence 4788999999999999999999999 9999999999999999999998 8876443
No 236
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=94.84 E-value=0.94 Score=45.47 Aligned_cols=126 Identities=17% Similarity=0.187 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHH-Hhh-h--hCC-CCccEEEEecCCCCCcc---------
Q 007311 476 GLDVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQ-WER-L--KGE-IDFRFAILCSGFALHSA--------- 537 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~-~~~-~--~~~-~~l~~vIlisG~~~~~~--------- 537 (608)
++..+++.|.+.+.+.. +...+-.||.||...+..... .+. . ... ..++++|+-|+......
T Consensus 46 ~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~ 125 (240)
T PF05705_consen 46 RLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSA 125 (240)
T ss_pred chHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHH
Confidence 45566666666666532 245788999988877765442 221 1 112 33889998776532110
Q ss_pred ------------c---------------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHH
Q 007311 538 ------------E---------------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAK 572 (608)
Q Consensus 538 ------------~---------------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~ 572 (608)
. .......+|-|.++++ .|.+++.+..++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~---~D~l~~~~~ve~~~~ 202 (240)
T PF05705_consen 126 ALPKSSPRWFVPLWPLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSK---ADPLIPWRDVEEHAE 202 (240)
T ss_pred HcCccchhhHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCC---CCcCcCHHHHHHHHH
Confidence 0 1233567999999999 899999999998887
Q ss_pred HhccCC--cEEEEeC-CCCcCCCC---hhhHHHHHHHH
Q 007311 573 AFEEGC--SVIIEHD-CGHIIPTR---SPYIDEIKSFL 604 (608)
Q Consensus 573 ~~~~~~--~~vv~~~-gGH~ip~~---~~~~~~i~~Fl 604 (608)
..+..+ +....|+ .+|.-... .+|.+++.+|+
T Consensus 203 ~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 203 EARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred HHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 776543 3344444 46653222 34777777764
No 237
>PRK14445 acylphosphatase; Provisional
Probab=94.82 E-value=0.064 Score=45.89 Aligned_cols=54 Identities=22% Similarity=0.321 Sum_probs=49.2
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-..| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~gP~~a~V~ 72 (91)
T PRK14445 18 GFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAERGPSRSSVT 72 (91)
T ss_pred CChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888776543
No 238
>PRK14451 acylphosphatase; Provisional
Probab=94.80 E-value=0.068 Score=45.54 Aligned_cols=54 Identities=24% Similarity=0.159 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|+=-..| |-.-+.|+.+++++|+++|+..|.++.++
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 71 (89)
T PRK14451 17 WFRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQKGPLNARVD 71 (89)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCceEEE
Confidence 4788999999999999999999999 99999999999999999999888877543
No 239
>PRK14428 acylphosphatase; Provisional
Probab=94.79 E-value=0.071 Score=46.15 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=49.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-.+| |-..+.|+.+++++|+++|+..|.++.++
T Consensus 22 GFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~~gP~~a~V~ 76 (97)
T PRK14428 22 GFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLAIGPRWSEVS 76 (97)
T ss_pred cchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHhhCCCccEEE
Confidence 4788999999999999999999999 99999999999999999999888887543
No 240
>PRK14440 acylphosphatase; Provisional
Probab=94.78 E-value=0.075 Score=45.37 Aligned_cols=53 Identities=21% Similarity=0.317 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..++|+|-|+=-..| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 17 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 70 (90)
T PRK14440 17 GFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEV 70 (90)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999988877644
No 241
>PRK14427 acylphosphatase; Provisional
Probab=94.63 E-value=0.08 Score=45.59 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+++|+|-|+=-.+| |=.-+.|+.+++++|+++|++.|.++.+
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~~p~~a~V 73 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNSDRAPGRV 73 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4688999999999999999999999 9999999999999999999988877644
No 242
>PRK14432 acylphosphatase; Provisional
Probab=94.62 E-value=0.083 Score=45.40 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=48.8
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeee-cchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVG-GKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~-g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|.|+=-..| |=.-+. |+.++++.|+++|+..|.++.++
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~gp~~a~V~ 71 (93)
T PRK14432 16 GFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKNGNKYSNIE 71 (93)
T ss_pred eehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHhCCCccEEE
Confidence 3688999999999999999999999 999996 99999999999999988887543
No 243
>PRK14421 acylphosphatase; Provisional
Probab=94.61 E-value=0.083 Score=45.93 Aligned_cols=54 Identities=20% Similarity=0.249 Sum_probs=49.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.+++|+|-|+=-..| |-..+.|+.+++++|+++|++.|.++.++
T Consensus 18 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V~ 72 (99)
T PRK14421 18 GYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCRRGPSAARVD 72 (99)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999888887543
No 244
>PRK14438 acylphosphatase; Provisional
Probab=94.57 E-value=0.08 Score=45.29 Aligned_cols=54 Identities=17% Similarity=0.198 Sum_probs=49.1
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-+.| |=..+.|+.+++++|+++|+..|.++.++
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 71 (91)
T PRK14438 17 AFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCHHGPSRARVS 71 (91)
T ss_pred CccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEEE
Confidence 4688999999999999999999999 99999999999999999999888877543
No 245
>PRK14425 acylphosphatase; Provisional
Probab=94.56 E-value=0.083 Score=45.50 Aligned_cols=53 Identities=21% Similarity=0.301 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.++||+|-|+=-..| |-..+.|+.++++.|+++|+..|.++.+
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~~gp~~a~V 73 (94)
T PRK14425 20 GFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFRRGPPGASV 73 (94)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999988877644
No 246
>PRK14423 acylphosphatase; Provisional
Probab=94.43 E-value=0.092 Score=45.02 Aligned_cols=53 Identities=19% Similarity=0.159 Sum_probs=48.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+.++.+|+|+|-|+=-.+| |-..+.|+.++++.|+++|+..|.++.+
T Consensus 19 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 72 (92)
T PRK14423 19 YYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEGSPAAVV 72 (92)
T ss_pred eehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999988887654
No 247
>PRK14444 acylphosphatase; Provisional
Probab=94.43 E-value=0.098 Score=44.85 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+|+|+|-|+=-.+| |-..+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (92)
T PRK14444 18 NFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYSGPSHARVE 72 (92)
T ss_pred CcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCCcEEE
Confidence 4788999999999999999999999 99999999999999999999878776443
No 248
>PRK14424 acylphosphatase; Provisional
Probab=94.39 E-value=0.11 Score=44.65 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+..++|+|-|+=-+.| |-..+.|+.++++.|+++|++.|.++.+
T Consensus 21 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~~gp~~a~V 74 (94)
T PRK14424 21 GFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLRHGPPAARV 74 (94)
T ss_pred chHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCCcEE
Confidence 5789999999999999999999999 9999999999999999999988877643
No 249
>PRK14446 acylphosphatase; Provisional
Probab=94.34 E-value=0.067 Score=45.47 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=48.4
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
+|.+-+.++.+++|+|.|+=.++| |-.-+.|+.++++.|+++|+..|.++.++
T Consensus 17 FR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~~gP~~a~V~ 70 (88)
T PRK14446 17 YRASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLWQGPPAATVA 70 (88)
T ss_pred EhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHhhCCCceEEE
Confidence 678889999999999999999999 99999999999999999999888777543
No 250
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.22 E-value=0.62 Score=52.50 Aligned_cols=119 Identities=19% Similarity=0.138 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 478 DVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 478 ~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
-+.+++|.+...- +-.+++|-|+|-||.+++.+..+++ .-++ ++|+|.+--...
T Consensus 711 Veglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P-----~Ifr--vAIAGapVT~W~~YDTgYTERYMg~P~~nE 783 (867)
T KOG2281|consen 711 VEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP-----NIFR--VAIAGAPVTDWRLYDTGYTERYMGYPDNNE 783 (867)
T ss_pred HHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc-----ceee--EEeccCcceeeeeecccchhhhcCCCccch
Confidence 3444555444321 1255689999999999999888543 3343 445554432221
Q ss_pred ------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccC--CcEEEEeCC-CCcCCCChh---hHHHH
Q 007311 539 ------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEG--CSVIIEHDC-GHIIPTRSP---YIDEI 600 (608)
Q Consensus 539 ------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--~~~vv~~~g-GH~ip~~~~---~~~~i 600 (608)
.....-.-..|++||- -|.-|......+|.+.+-.. ..+++.++- -|.+-.... +-..+
T Consensus 784 ~gY~agSV~~~VeklpdepnRLlLvHGl---iDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rl 860 (867)
T KOG2281|consen 784 HGYGAGSVAGHVEKLPDEPNRLLLVHGL---IDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARL 860 (867)
T ss_pred hcccchhHHHHHhhCCCCCceEEEEecc---cccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHH
Confidence 1122233458999999 89999999999988877542 356666654 787644322 45678
Q ss_pred HHHHHH
Q 007311 601 KSFLQR 606 (608)
Q Consensus 601 ~~Fl~~ 606 (608)
+.||++
T Consensus 861 l~FlQ~ 866 (867)
T KOG2281|consen 861 LHFLQE 866 (867)
T ss_pred HHHHhh
Confidence 888875
No 251
>PRK14452 acylphosphatase; Provisional
Probab=94.10 E-value=0.13 Score=45.32 Aligned_cols=54 Identities=20% Similarity=0.104 Sum_probs=49.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|.=-..| |-.-+.|+.+++++|++++...|.++.++
T Consensus 34 GFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~gP~~A~V~ 88 (107)
T PRK14452 34 GFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERGPPGARVK 88 (107)
T ss_pred ChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcCCCCcEEE
Confidence 4789999999999999999999999 99999999999999999999988887543
No 252
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=93.97 E-value=0.21 Score=56.05 Aligned_cols=56 Identities=25% Similarity=0.182 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.+...+++|+++.|..-| ..+.|+|+|-||+.+..++..- .....|+.+|+.||..
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---SSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---GGTTSBSEEEEES--T
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecc---cccccccccccccccc
Confidence 356788999999999864 3456999999999988877752 3356799999999953
No 253
>PRK14437 acylphosphatase; Provisional
Probab=93.81 E-value=0.14 Score=45.28 Aligned_cols=54 Identities=17% Similarity=0.125 Sum_probs=49.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+.++.++||+|-|+=-..| |=.-+.|+.+++++|+++|+..|.++.++
T Consensus 37 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~~gP~~a~V~ 91 (109)
T PRK14437 37 FFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVS 91 (109)
T ss_pred CchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCceEEE
Confidence 5899999999999999999999999 99999999999999999999888877543
No 254
>PRK14442 acylphosphatase; Provisional
Probab=93.62 E-value=0.15 Score=43.59 Aligned_cols=54 Identities=17% Similarity=0.085 Sum_probs=49.0
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCcc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGTD 80 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~~ 80 (608)
-+|.+.+..+.+++|+|-|.=-..| |-..+.|+.++++.|+++|+..|.++.++
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~ 72 (91)
T PRK14442 18 GFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLGRGPRHAEVS 72 (91)
T ss_pred cccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCeEEE
Confidence 4688889999999999999999999 99999999999999999999888887543
No 255
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.58 E-value=0.25 Score=51.11 Aligned_cols=99 Identities=17% Similarity=0.106 Sum_probs=64.0
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------cccCCCCCCEEEEEcCCCCCCc
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------FEHRSINCPSLHIFGGDLGNDR 560 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------~~~~~i~~PvL~i~G~~~~~D~ 560 (608)
+|.|.|+||.+|+..++++ +..|+-|+..||+.-.... .....-.. ..+..|.+ .+.
T Consensus 180 ~L~G~SlGG~vsL~agl~~-----Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l~~~~a~~~~~~-~~l~~g~~--~~~ 251 (299)
T COG2382 180 VLAGDSLGGLVSLYAGLRH-----PERFGHVLSQSGSFWWTPLDTQPQGEVAESLKILHAIGTDER-IVLTTGGE--EGD 251 (299)
T ss_pred EEeccccccHHHHHHHhcC-----chhhceeeccCCccccCccccccccchhhhhhhhhccCccce-EEeecCCc--ccc
Confidence 5899999999999999954 6789999999988654321 01112223 44445541 333
Q ss_pred ccchHHHHHHHHHhccCC--cEEEEeCCCCcCCCChhhHHHHHHHH
Q 007311 561 QVANQASKELAKAFEEGC--SVIIEHDCGHIIPTRSPYIDEIKSFL 604 (608)
Q Consensus 561 ~Vp~~~~~~l~~~~~~~~--~~vv~~~gGH~ip~~~~~~~~i~~Fl 604 (608)
.. ..-++|++.|.... ..+.+++|||-.-.-++.+.+...+|
T Consensus 252 ~~--~pNr~L~~~L~~~g~~~~yre~~GgHdw~~Wr~~l~~~L~~l 295 (299)
T COG2382 252 FL--RPNRALAAQLEKKGIPYYYREYPGGHDWAWWRPALAEGLQLL 295 (299)
T ss_pred cc--chhHHHHHHHHhcCCcceeeecCCCCchhHhHHHHHHHHHHh
Confidence 33 45677888887543 45667889999866555544444443
No 256
>PRK14434 acylphosphatase; Provisional
Probab=93.54 E-value=0.14 Score=43.96 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=47.1
Q ss_pred HHHHHHHHhHhcC-CeeEEEEccCC-cceeeecch-HhHHHHHHHHHhCCC-CCCcc
Q 007311 28 LFTFYESNCSQLG-LLGRVRLAPHG-VNVTVGGKL-SSLESHIDAVKSISL-FEGTD 80 (608)
Q Consensus 28 ~~~~~~~~~~~~~-l~Gri~ia~eG-iN~t~~g~~-~~~~~~~~~~~~~~~-f~~~~ 80 (608)
+|.+.+.++++|+ |+|.|+=-.+| |-.-+.|+. +++++|+++|++.|. ++.++
T Consensus 17 FR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V~ 73 (92)
T PRK14434 17 FRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKVT 73 (92)
T ss_pred EhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 6888999999999 99999999999 999999987 699999999998763 76543
No 257
>PRK14441 acylphosphatase; Provisional
Probab=93.37 E-value=0.19 Score=43.22 Aligned_cols=53 Identities=17% Similarity=0.216 Sum_probs=48.6
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCCCCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISLFEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~f~~~ 79 (608)
-+|.+.+..+.+|+|+|-|+=-+.| |=.-+.|+.+.++.|+++|++.|.++.+
T Consensus 19 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 72 (93)
T PRK14441 19 AFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCHAGPPAARV 72 (93)
T ss_pred cchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999988877644
No 258
>PRK14431 acylphosphatase; Provisional
Probab=93.36 E-value=0.16 Score=43.23 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=47.1
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHhCC-CCCCc
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSIS-LFEGT 79 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~-~f~~~ 79 (608)
+|-+.+..+..++|+|-|+=-.+||-..+.|+.+++++|+++|+..| .++.+
T Consensus 17 FR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~g~p~~a~V 69 (89)
T PRK14431 17 FRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIEGASPASNV 69 (89)
T ss_pred EhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhcCCCCcEEE
Confidence 67788899999999999999999999999999999999999999876 56644
No 259
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=93.33 E-value=0.23 Score=55.91 Aligned_cols=58 Identities=21% Similarity=0.066 Sum_probs=35.4
Q ss_pred ccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 471 QQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 471 ~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
++-..++..++++|.+.==.......+-|+|.||.++...+-+++ .-|+.+|+=-|+.
T Consensus 527 qN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rP-----dLF~avia~Vpfm 584 (712)
T KOG2237|consen 527 QNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRP-----DLFGAVIAKVPFM 584 (712)
T ss_pred cccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCc-----hHhhhhhhcCcce
Confidence 445666777777664431112344578999999999988776543 3345555544443
No 260
>COG2603 Predicted ATPase [General function prediction only]
Probab=93.22 E-value=0.11 Score=53.17 Aligned_cols=85 Identities=18% Similarity=0.303 Sum_probs=54.6
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccC--------------CCchHH--------------HHhhhhhcCCCe
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQF--------------SDLPTW--------------IDNNAEQLQGKH 208 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~--------------~~~~~~--------------~~~~~~~~k~k~ 208 (608)
.+..|||||.+-||..|++++ ++|.+..+= .+.-.. ++.......+.+
T Consensus 14 ~~~~lid~rap~ef~~g~~~i----a~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask~f~e~~~ 89 (334)
T COG2603 14 ADTPLIDVRAPIEFENGAMPI----AINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASKAFQEENP 89 (334)
T ss_pred cCCceeeccchHHHhcccchh----hhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 378899999999999999987 455432110 000000 000001134677
Q ss_pred EEEEc-CCCccHHHHHHHHHhcCCCCCcEEEcCccHHHHH
Q 007311 209 VLMYC-TGGIRCEMASAYVRSKGAGFENVFQLYGGIQRYL 247 (608)
Q Consensus 209 Iv~yC-tgGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~ 247 (608)
+-++| +||-|+.-.+.||... .|+ .+--+.||..++.
T Consensus 90 ~Gi~c~rgg~rsk~v~~~l~~~-~g~-~~~r~iGGeKalr 127 (334)
T COG2603 90 VGILCARGGLRSKIVQKWLGYA-AGI-DYPRVIGGEKALR 127 (334)
T ss_pred cceeeccccchhHHHHHHHHHH-HHh-hhhhhhchHHHHH
Confidence 88889 7899999999999443 375 4556778888775
No 261
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.34 E-value=0.59 Score=42.39 Aligned_cols=38 Identities=26% Similarity=0.191 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHHhh
Q 007311 479 VSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 479 ~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
+..+.|.+.+++..+ ...|.|||+||++|..+++....
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhh
Confidence 444556665555543 34688999999999999987653
No 262
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.24 E-value=0.99 Score=45.10 Aligned_cols=62 Identities=15% Similarity=0.135 Sum_probs=42.2
Q ss_pred cCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeC-----CCCcCCCChhhHHHHHHHHH
Q 007311 541 HRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHD-----CGHIIPTRSPYIDEIKSFLQ 605 (608)
Q Consensus 541 ~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~-----gGH~ip~~~~~~~~i~~Fl~ 605 (608)
...++||++.+--. +|+..|......+.+.+.+...+....+ -||+=-.+.+.-....++|.
T Consensus 212 yaaVrtPi~~~~~~---DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~ 278 (281)
T COG4757 212 YAAVRTPITFSRAL---DDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLG 278 (281)
T ss_pred HHHhcCceeeeccC---CCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHH
Confidence 35789999999998 8999999999999999987555544432 38873223332233344443
No 263
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=92.22 E-value=10 Score=38.85 Aligned_cols=57 Identities=16% Similarity=-0.019 Sum_probs=40.3
Q ss_pred ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCcccc------ccCCC-CCCEEEEEcCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAEF------EHRSI-NCPSLHIFGGD 555 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~~------~~~~i-~~PvL~i~G~~ 555 (608)
..+|+|||+||.+++...+. .+.-|+..+++|+..-...+. ..... ..++++..|..
T Consensus 138 ~~~i~GhSlGGLfvl~aLL~-----~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~ 201 (264)
T COG2819 138 RTAIIGHSLGGLFVLFALLT-----YPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSG 201 (264)
T ss_pred cceeeeecchhHHHHHHHhc-----CcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEeccc
Confidence 35799999999999998884 356788899999887655431 11111 55677777774
No 264
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=92.20 E-value=0.19 Score=44.59 Aligned_cols=85 Identities=13% Similarity=0.104 Sum_probs=39.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhh-ccccC-------CCCccccCcccccCCCc-hHHHHh
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETR-IGKFR-------TPSVETLDPEIRQFSDL-PTWIDN 199 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~-~Gh~~-------g~~~~~l~~~~~~~~~~-~~~~~~ 199 (608)
+..++++++.++-+.+ =..||+.|...|-. ..... ......++.|+.. .++ ++.+..
T Consensus 12 s~Q~~~~d~~~la~~G-------------fktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~-~~~~~~~v~~ 77 (110)
T PF04273_consen 12 SGQPSPEDLAQLAAQG-------------FKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG-GAITEEDVEA 77 (110)
T ss_dssp ECS--HHHHHHHHHCT---------------EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----T-TT--HHHHHH
T ss_pred CCCCCHHHHHHHHHCC-------------CcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC-CCCCHHHHHH
Confidence 3468999999888764 34799999887632 11110 0011122222211 111 122222
Q ss_pred hhh--hcCCCeEEEEcCCCccHHHHHHHHH
Q 007311 200 NAE--QLQGKHVLMYCTGGIRCEMASAYVR 227 (608)
Q Consensus 200 ~~~--~~k~k~Iv~yCtgGiR~~~a~~~L~ 227 (608)
..+ ....++|++||++|.|+...-++-+
T Consensus 78 f~~~l~~~~~Pvl~hC~sG~Ra~~l~~l~~ 107 (110)
T PF04273_consen 78 FADALESLPKPVLAHCRSGTRASALWALAQ 107 (110)
T ss_dssp HHHHHHTTTTSEEEE-SCSHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCChhHHHHHHHHh
Confidence 211 1246799999999999976655443
No 265
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=92.14 E-value=0.28 Score=53.89 Aligned_cols=57 Identities=25% Similarity=0.135 Sum_probs=43.0
Q ss_pred ccHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 475 DGLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+...+++|+++.|+.-| .-+.|+|.|-||+.++.+++.- ..+.-|+.+|+.||...
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P---~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVP---SAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCc---cchHHHHHHHHhCCCCC
Confidence 456678999999999864 2346999999999988877631 22345778899999886
No 266
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=91.79 E-value=0.42 Score=40.77 Aligned_cols=46 Identities=17% Similarity=0.214 Sum_probs=43.7
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS 72 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~ 72 (608)
.+|.+-+..|+.|||+|=|.=..|| |-|++.|+.+.++.+..||+.
T Consensus 22 ~fr~~t~~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~ 68 (98)
T KOG3360|consen 22 CFRKHTLDEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLT 68 (98)
T ss_pred hhhHHHHHHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 6788888999999999999999999 999999999999999999985
No 267
>PLN02727 NAD kinase
Probab=91.45 E-value=1.4 Score=52.13 Aligned_cols=171 Identities=14% Similarity=0.166 Sum_probs=92.3
Q ss_pred cCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHh---CCCCCCcccccccCCCCCCCCccc
Q 007311 20 STIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS---ISLFEGTDFKLASSDYPLNGKVAH 96 (608)
Q Consensus 20 ~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~---~~~f~~~~~k~~~~~~~~~~~~~~ 96 (608)
..|+-..-+|..+++-|+++.+-=-=|+.+.+.-+ -.+..-++.|+. |..|-..+ +.| .
T Consensus 174 ~~~~~l~~~r~~~~~~ce~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~d~~~pr~~------~~p------~ 235 (986)
T PLN02727 174 DKLPPLAIFRGEMKRCCESLHVALENYLTPDDDRS------LDVWRKLQRLKNVCYDAGFPRSD------DYP------C 235 (986)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhccCCCCCcc------hhHHHHHHHHHhhhhhcCCCCCC------CCC------C
Confidence 34555667899999999999877777788877644 234444556665 33443211 011 1
Q ss_pred cCCcccccee----eecceeecCCCCCCCCCCCCCCCcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhc
Q 007311 97 ECGFTSLSIR----IVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRI 172 (608)
Q Consensus 97 ~~~F~~l~vr----~~~eiv~~~~~~~~~~~~~~~~g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~ 172 (608)
..-|+.+..- .+..++..... +. --.+.+++|+++..+.+.+ =-.||+.|...|- -
T Consensus 236 ~~~~~n~~~v~~~~~~~~~~~~~~~--~~----~~rsgQpspe~la~LA~~G-------------fKTIINLRpd~E~-~ 295 (986)
T PLN02727 236 HTLFANWNPVYLSTSKEDIDSKESE--AA----FWRGGQVTEEGLKWLLEKG-------------FKTIVDLRAEIVK-D 295 (986)
T ss_pred cccccccceeeecccccccccccce--ee----EEEeCCCCHHHHHHHHHCC-------------CeEEEECCCCCcC-C
Confidence 1235554332 12222222110 00 0136789999998877653 2469999998872 1
Q ss_pred cccC--------CCCccccCcccccCCC-chHHHHhhhhhc---CCCeEEEEcCCCccH--HHHHHHHHh
Q 007311 173 GKFR--------TPSVETLDPEIRQFSD-LPTWIDNNAEQL---QGKHVLMYCTGGIRC--EMASAYVRS 228 (608)
Q Consensus 173 Gh~~--------g~~~~~l~~~~~~~~~-~~~~~~~~~~~~---k~k~Iv~yCtgGiR~--~~a~~~L~~ 228 (608)
+... ...+..++.++..... -++.+++..+.. ..++|+|||.+|.|+ .+.|.||.-
T Consensus 296 q~~~~ee~eAae~~GL~yVhIPVs~~~apt~EqVe~fa~~l~~slpkPVLvHCKSGarRAGamvA~yl~~ 365 (986)
T PLN02727 296 NFYQAAVDDAISSGKIEVVKIPVEVRTAPSAEQVEKFASLVSDSSKKPIYLHSKEGVWRTSAMVSRWKQY 365 (986)
T ss_pred CchhHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHHHHHHhhcCCCEEEECCCCCchHHHHHHHHHHH
Confidence 1110 0112223333211111 123444433333 579999999999953 456667763
No 268
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=91.44 E-value=0.43 Score=47.89 Aligned_cols=59 Identities=22% Similarity=0.153 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
++....+++++.+++........|.|||.||.+|..+++.... ....++..++...|..
T Consensus 65 ~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~-~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 65 TPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDD-EIQDRISKVYSFDGPG 123 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccH-HHhhheeEEEEeeCCC
Confidence 5566889999999988766556899999999999999886321 1234677788777643
No 269
>PRK14443 acylphosphatase; Provisional
Probab=91.35 E-value=0.43 Score=41.03 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=47.5
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHhCCC-CCCc
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKSISL-FEGT 79 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~~~~-f~~~ 79 (608)
-+|.+.+..+.+++|+|-|+=-+.| |-.-+.|+.+.++.|+++|+..|. ++.+
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~g~p~~a~V 72 (93)
T PRK14443 18 GFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKKGPSPGCRI 72 (93)
T ss_pred cCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhcCCCCcEEE
Confidence 4688889999999999999999999 999999999999999999998764 6644
No 270
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.28 E-value=0.65 Score=46.58 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=33.6
Q ss_pred cccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhh
Q 007311 474 TDGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
.++..+-.+.|.+.|.. .+..+.|+||||||.+|...+.+...
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 34667777778888876 55556899999999999998887653
No 271
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]
Probab=91.05 E-value=0.38 Score=49.25 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=58.3
Q ss_pred CCCCcEEEecCChhhhh-----------ccccCCCCccccCcccccCCC-----c-hHHHHh---hhhhcCCCeEEEEcC
Q 007311 155 DDKKLVLLDARNLYETR-----------IGKFRTPSVETLDPEIRQFSD-----L-PTWIDN---NAEQLQGKHVLMYCT 214 (608)
Q Consensus 155 ~~~~~vllDvRn~~E~~-----------~Gh~~g~~~~~l~~~~~~~~~-----~-~~~~~~---~~~~~k~k~Iv~yCt 214 (608)
+.+++..||.|...+|. -|||+| +++.|...+-. . +..++. ......+++|++-|.
T Consensus 169 ~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpG----a~n~P~~~~~~~~g~~k~~edl~~~f~~~~l~~~~p~~~sC~ 244 (286)
T KOG1529|consen 169 ATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPG----AINFPFDEVLDPDGFIKPAEDLKHLFAQKGLKLSKPVIVSCG 244 (286)
T ss_pred ccccceeeeccccccccccCCCCcccCcCccCCC----cccCChHHhcccccccCCHHHHHHHHHhcCcccCCCEEEeec
Confidence 34679999999998885 489999 44444322210 0 122222 123356899999999
Q ss_pred CCccHHHHHHHHHhcCCCCCcEEEcCccHHHHHH
Q 007311 215 GGIRCEMASAYVRSKGAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 215 gGiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~ 248 (608)
.|+.....+..|..- | .+|-...|+...|.-
T Consensus 245 ~Gisa~~i~~al~r~--g-~~~~lYdGS~~Ew~~ 275 (286)
T KOG1529|consen 245 TGISASIIALALERS--G-PDAKLYDGSWTEWAL 275 (286)
T ss_pred cchhHHHHHHHHHhc--C-CCcceecccHHHHhh
Confidence 999855555555544 7 789999999999975
No 272
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=90.97 E-value=0.27 Score=48.48 Aligned_cols=39 Identities=18% Similarity=0.317 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 475 DGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+..++.++-.+...+..|+ +|.|||||+++...++...
T Consensus 78 ~DV~~AF~~yL~~~n~GRPf-ILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 78 SDVRAAFDYYLANYNNGRPF-ILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHhcCCCCCE-EEEEeChHHHHHHHHHHHH
Confidence 34444444433333323355 8999999999999998754
No 273
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.82 E-value=2 Score=45.62 Aligned_cols=54 Identities=15% Similarity=0.025 Sum_probs=33.5
Q ss_pred HHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHHHhhhh---CCCCccEEEEecCCC
Q 007311 480 SLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQWERLK---GEIDFRFAILCSGFA 533 (608)
Q Consensus 480 s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~---~~~~l~~vIlisG~~ 533 (608)
+++.+.+.|.... ..+.|++||||.-+++.+..+..... -...++=+|+.+.-.
T Consensus 176 aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 176 ALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 3444444444443 44579999999999999887654311 124566677766543
No 274
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=90.79 E-value=0.45 Score=52.54 Aligned_cols=49 Identities=16% Similarity=0.134 Sum_probs=31.2
Q ss_pred HHHHHHhHh-CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCC
Q 007311 483 YLKTIFSQE-GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGF 532 (608)
Q Consensus 483 ~L~~~i~~~-~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~ 532 (608)
.+.+..+.. +..+.|+||||||.+++.++.+.++.. ..-++.+|.+++.
T Consensus 151 lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~-~k~I~~~I~la~P 200 (440)
T PLN02733 151 KLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVF-EKYVNSWIAIAAP 200 (440)
T ss_pred HHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhH-HhHhccEEEECCC
Confidence 333343333 345689999999999999887543211 2346777777653
No 275
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=90.49 E-value=0.33 Score=46.89 Aligned_cols=60 Identities=12% Similarity=0.065 Sum_probs=38.4
Q ss_pred cccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHH--HhhhhCCCCccEEEEecCCCC
Q 007311 474 TDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQ--WERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~--~~~~~~~~~l~~vIlisG~~~ 534 (608)
..+..+..+.+.+...+-. ...+|+||||||+++..++.. ... ....++.++|+++-...
T Consensus 61 ~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~-~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 61 AAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPP-DVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSH-HHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCCh-hhhhhEEEEEEecCCcc
Confidence 3455566666665555543 356899999999999998876 110 11245788888876543
No 276
>PRK14439 acylphosphatase; Provisional
Probab=90.09 E-value=0.62 Score=43.86 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=46.2
Q ss_pred HHHHHHHHhHhcCCeeEEEEccCC-cceeeecchHhHHHHHHHHHh-CCCCCC
Q 007311 28 LFTFYESNCSQLGLLGRVRLAPHG-VNVTVGGKLSSLESHIDAVKS-ISLFEG 78 (608)
Q Consensus 28 ~~~~~~~~~~~~~l~Gri~ia~eG-iN~t~~g~~~~~~~~~~~~~~-~~~f~~ 78 (608)
+|.+.+..+.++||+|-|.=-++| |-..+.|+.++++.|+++|++ .|.++.
T Consensus 90 FR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~~gPp~A~ 142 (163)
T PRK14439 90 FRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSAR 142 (163)
T ss_pred chHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCCeE
Confidence 578889999999999999999999 999999999999999999998 466653
No 277
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=88.86 E-value=1.7 Score=35.98 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=30.9
Q ss_pred CccEEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCC
Q 007311 371 RKLRILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAP 411 (608)
Q Consensus 371 ~~~~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP 411 (608)
.+.+|+++||++.....|. .+++.|. .++.++..|.+
T Consensus 15 ~k~~v~i~HG~~eh~~ry~----~~a~~L~~~G~~V~~~D~r 52 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYA----HLAEFLAEQGYAVFAYDHR 52 (79)
T ss_pred CCEEEEEeCCcHHHHHHHH----HHHHHHHhCCCEEEEECCC
Confidence 5778999999999998888 6667665 58999999866
No 278
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.45 E-value=1.4 Score=43.82 Aligned_cols=33 Identities=24% Similarity=0.157 Sum_probs=22.7
Q ss_pred HHHHHHhHhC-CceEEEecChhHHHHHHHHHHHh
Q 007311 483 YLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 483 ~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.+.+.+.+.. ....+.|||+||++|..++....
T Consensus 117 ~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 117 ELKSALKQYPDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred HHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 3344444333 23468899999999999998654
No 279
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=87.80 E-value=19 Score=39.08 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=48.7
Q ss_pred ceEEEecChhHHHHHHHHHHHh-----h------hhCCCCccEEEEecCCCCCcccc------ccCCCC-CCEEEEEcCC
Q 007311 494 FDGILGFSQGAAMAASVCAQWE-----R------LKGEIDFRFAILCSGFALHSAEF------EHRSIN-CPSLHIFGGD 555 (608)
Q Consensus 494 ~~~IlGFSQGa~vAl~la~~~~-----~------~~~~~~l~~vIlisG~~~~~~~~------~~~~i~-~PvL~i~G~~ 555 (608)
...++||||||=+-=.+.-+.. + +.-...-.|=|.+.||.....+. +..++. .-+.-|+|.
T Consensus 327 ~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~~~~~~~~~~l~~~~v~CiYG~- 405 (456)
T COG3946 327 RVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGAGDVVPDIAKLPLARVQCIYGQ- 405 (456)
T ss_pred eEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCCCCcchhhhhCCcceeEEEecC-
Confidence 3469999999965433222211 0 01123344556677776554332 122333 347778998
Q ss_pred CCCCcccchHHHHHHHHHhccCCcEEEEeCCCCcCCC
Q 007311 556 LGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPT 592 (608)
Q Consensus 556 ~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~ip~ 592 (608)
+.+|...|. ++.....++..+|||++-.
T Consensus 406 ~e~d~~Cp~---------l~~~~~~~v~lpGgHHFd~ 433 (456)
T COG3946 406 EEKDTACPS---------LKAKGVDTVKLPGGHHFDG 433 (456)
T ss_pred ccccccCCc---------chhhcceeEecCCCcccCc
Confidence 334554541 1222377788899999955
No 280
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=87.58 E-value=1.9 Score=45.90 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 476 GLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
.-++..+++.+.+...+ ....++||||||.++..++.... +...++.++.+++.-
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~---~~~~V~~~~tl~tp~ 164 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLG---GANRVASVVTLGTPH 164 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcC---ccceEEEEEEeccCC
Confidence 34556666777776664 45579999999999997776442 225677777777654
No 281
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=87.20 E-value=12 Score=41.72 Aligned_cols=47 Identities=21% Similarity=0.417 Sum_probs=31.9
Q ss_pred ccCCCCCCEEEEEcCCCCCCcccchHHHHH-HHHHhcc-------C-CcEEEEeC-CCCc
Q 007311 540 EHRSINCPSLHIFGGDLGNDRQVANQASKE-LAKAFEE-------G-CSVIIEHD-CGHI 589 (608)
Q Consensus 540 ~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~-l~~~~~~-------~-~~~vv~~~-gGH~ 589 (608)
.+..|++|++++.|. .|.+.|++.+-. +.+.+.+ + +.....|+ .||.
T Consensus 292 DLr~Ir~Piivfas~---gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASY---GDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEecc---CCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 356899999999999 799999887754 2233332 1 23445566 4995
No 282
>PLN02847 triacylglycerol lipase
Probab=86.77 E-value=3.4 Score=46.78 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ccHHHHHHHHHHHH--------hHhCC-ceEEEecChhHHHHHHHHHHHh
Q 007311 475 DGLDVSLAYLKTIF--------SQEGP-FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 475 ~~l~~s~~~L~~~i--------~~~~~-~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.|+-.++.+|.+.+ ..... ...|.|||+||++|+.++....
T Consensus 224 ~Gml~AArwI~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 224 CGMVAAARWIAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHHHh
Confidence 35555555554433 33333 3468899999999999987653
No 283
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=86.66 E-value=0.79 Score=49.88 Aligned_cols=44 Identities=11% Similarity=-0.024 Sum_probs=31.9
Q ss_pred HhCCceEEEecChhHHHHHHHHHHHhhhh-CCCCccEEEEecCCC
Q 007311 490 QEGPFDGILGFSQGAAMAASVCAQWERLK-GEIDFRFAILCSGFA 533 (608)
Q Consensus 490 ~~~~~~~IlGFSQGa~vAl~la~~~~~~~-~~~~l~~vIlisG~~ 533 (608)
..+..+.|+||||||.++..+........ ....++.+|.+++..
T Consensus 116 ~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 116 KNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred hcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 34666689999999999999887653210 134588999988754
No 284
>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional
Probab=86.43 E-value=0.53 Score=36.54 Aligned_cols=44 Identities=23% Similarity=0.733 Sum_probs=35.7
Q ss_pred ccccCCCCccc---cccCCCCCccccce-EEeCccccccccccccchhh
Q 007311 278 GSCLLCSSSFD---DYSSRCRCTHCRML-VLVCDTCRMEGAQYVCELCR 322 (608)
Q Consensus 278 ~~C~~C~~~~~---~~~~~c~~~~C~~l-~l~C~~C~~~~~~~~c~~c~ 322 (608)
-.|..|+.+.. .+. .-.|+.|... +.-|..|++.+..|.|+.|-
T Consensus 8 ~~CtSCg~~i~~~~~~~-~F~CPnCG~~~I~RC~~CRk~~~~Y~CP~CG 55 (59)
T PRK14890 8 PKCTSCGIEIAPREKAV-KFLCPNCGEVIIYRCEKCRKQSNPYTCPKCG 55 (59)
T ss_pred ccccCCCCcccCCCccC-EeeCCCCCCeeEeechhHHhcCCceECCCCC
Confidence 47999997653 343 5678999877 88999999999999999884
No 285
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=86.29 E-value=2.2 Score=48.53 Aligned_cols=109 Identities=16% Similarity=0.015 Sum_probs=66.5
Q ss_pred ccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc--------------
Q 007311 473 QTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE-------------- 538 (608)
Q Consensus 473 ~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~-------------- 538 (608)
-..++-++.++|.+.=-......+++|=|-||++...++-+. +..|+++|+-.+|......
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~ 581 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA-----PDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWD 581 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC-----hhhhhheeecCCccchhhhhcCCCCCCCccchh
Confidence 345566666655443111234557899999999988888744 4568899987777543211
Q ss_pred ---------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhc----cCCcEEEE--eCCCCc
Q 007311 539 ---------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFE----EGCSVIIE--HDCGHI 589 (608)
Q Consensus 539 ---------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~----~~~~~vv~--~~gGH~ 589 (608)
....+--.|+|.+.|- .|+.|......++...+. +....+.. .++||.
T Consensus 582 EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl---~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 582 EWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGL---NDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred hhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccc---cCCccccchHHHHHHHHhhcccCCCcEEEEecccccCC
Confidence 1123444678888888 899987755554444333 32233333 567995
No 286
>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]
Probab=86.11 E-value=0.37 Score=37.33 Aligned_cols=45 Identities=24% Similarity=0.699 Sum_probs=37.6
Q ss_pred cccccCCCCcc---ccccCCCCCcccc-ceEEeCccccccccccccchhh
Q 007311 277 MGSCLLCSSSF---DDYSSRCRCTHCR-MLVLVCDTCRMEGAQYVCELCR 322 (608)
Q Consensus 277 ~~~C~~C~~~~---~~~~~~c~~~~C~-~l~l~C~~C~~~~~~~~c~~c~ 322 (608)
...|..||... ..|+ .-.|+.|. ..+.-|..|++.++.|.|+.|-
T Consensus 9 ~~~CtSCg~~i~p~e~~v-~F~CPnCGe~~I~Rc~~CRk~g~~Y~Cp~CG 57 (61)
T COG2888 9 PPVCTSCGREIAPGETAV-KFPCPNCGEVEIYRCAKCRKLGNPYRCPKCG 57 (61)
T ss_pred CceeccCCCEeccCCcee-EeeCCCCCceeeehhhhHHHcCCceECCCcC
Confidence 56899999754 5565 57789999 8899999999999999999884
No 287
>PLN02408 phospholipase A1
Probab=84.98 E-value=3.9 Score=43.91 Aligned_cols=36 Identities=22% Similarity=0.190 Sum_probs=25.6
Q ss_pred HHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 480 SLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 480 s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
..+.|.+++++... ...|.|||+||++|+..|....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~ 222 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIK 222 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34455566655432 2478999999999999998664
No 288
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=83.98 E-value=6.9 Score=41.82 Aligned_cols=89 Identities=18% Similarity=0.293 Sum_probs=55.8
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccC----------CcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccce
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKN----------IAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRF 442 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~----------~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (608)
..||++|||-+|-.+|. .+...|.. .++||.|.-| +|
T Consensus 153 ~PlLl~HGwPGsv~EFy----kfIPlLT~p~~hg~~~d~~FEVI~PSlP-----------------------------Gy 199 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFY----KFIPLLTDPKRHGNESDYAFEVIAPSLP-----------------------------GY 199 (469)
T ss_pred cceEEecCCCchHHHHH----hhhhhhcCccccCCccceeEEEeccCCC-----------------------------Cc
Confidence 34899999999999999 66666642 1344544333 77
Q ss_pred eeeccCCCCCccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhC-CceEEEecChhHHHHHHHHHHHhh
Q 007311 443 AWFVAPDFSGKRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEG-PFDGILGFSQGAAMAASVCAQWER 516 (608)
Q Consensus 443 ~W~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~-~~~~IlGFSQGa~vAl~la~~~~~ 516 (608)
.|-+.+.. ..| +..+...-+.+++-+.+ ...-|-|=-.|+.++..+|.+++.
T Consensus 200 gwSd~~sk------------~GF----------n~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 200 GWSDAPSK------------TGF----------NAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred ccCcCCcc------------CCc----------cHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch
Confidence 88663321 112 22334445556665555 222466777999999999988754
No 289
>PLN02454 triacylglycerol lipase
Probab=83.43 E-value=3.1 Score=45.29 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 478 DVSLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
++.+..|.+++++... .+.|.|||+||+||+..|....
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~ 250 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIV 250 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHH
Confidence 3445555666655432 2568999999999999997653
No 290
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=83.39 E-value=3.1 Score=37.54 Aligned_cols=25 Identities=32% Similarity=0.638 Sum_probs=18.8
Q ss_pred CCCeEEEEcCCCc-cHHH-HHHHHHhc
Q 007311 205 QGKHVLMYCTGGI-RCEM-ASAYVRSK 229 (608)
Q Consensus 205 k~k~Iv~yCtgGi-R~~~-a~~~L~~~ 229 (608)
.+++|+++|+.|. ||.. +++||...
T Consensus 80 ~~~~vlVHC~~G~~Rs~~~~~~~l~~~ 106 (139)
T cd00127 80 KGGKVLVHCLAGVSRSATLVIAYLMKT 106 (139)
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 5789999999997 8874 45566543
No 291
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=83.22 E-value=2.9 Score=46.55 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhHhC----CceEEEecChhHHHHHHHHHHHhhh--h---CCCCccEEEEecCCCCCc
Q 007311 478 DVSLAYLKTIFSQEG----PFDGILGFSQGAAMAASVCAQWERL--K---GEIDFRFAILCSGFALHS 536 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~----~~~~IlGFSQGa~vAl~la~~~~~~--~---~~~~l~~vIlisG~~~~~ 536 (608)
++.++.|..++.+.. ....|+|+|+||..+-.+|....+. . ....++|+++-.|+..+.
T Consensus 152 ~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~ 219 (462)
T PTZ00472 152 EDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPY 219 (462)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChh
Confidence 334444444444322 2237999999999998888765421 1 136799999988887554
No 292
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=80.62 E-value=2.4 Score=48.04 Aligned_cols=55 Identities=25% Similarity=0.183 Sum_probs=38.7
Q ss_pred cHHHHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 476 GLDVSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
+...+++|+++.|..-+ ..+.|+|+|.||+.+..++..-. ....+..+|.+||..
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~---s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPH---SRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHh---hHHHHHHHHhhcccc
Confidence 56788999999998753 34569999999999988776321 113355566666653
No 293
>PLN02571 triacylglycerol lipase
Probab=80.38 E-value=2.4 Score=46.20 Aligned_cols=38 Identities=24% Similarity=0.146 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHHh
Q 007311 478 DVSLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~~ 515 (608)
++.+..|.++++.... ...|.|||+||+||+..|....
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHH
Confidence 4455666666665432 3478999999999999998653
No 294
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.30 E-value=45 Score=35.74 Aligned_cols=60 Identities=15% Similarity=0.294 Sum_probs=42.1
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEE--EEe-CCCCcC---CCChhhHHHHHHHHHHh
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVI--IEH-DCGHII---PTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~v--v~~-~gGH~i---p~~~~~~~~i~~Fl~~~ 607 (608)
..+.+.+++. .|.++|....++..+...+.+..+ +.+ ++-|.. -....+.++..+|++..
T Consensus 225 ~~~~ly~~s~---~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSD---NDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCC---ccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 6788899988 899999999999877776543333 333 344442 11225899999999864
No 295
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=79.08 E-value=13 Score=40.18 Aligned_cols=126 Identities=10% Similarity=0.027 Sum_probs=88.8
Q ss_pred cccccHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecC----------------
Q 007311 472 QQTDGLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSG---------------- 531 (608)
Q Consensus 472 ~~~~~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG---------------- 531 (608)
.++.....+++.+.+++.+. ....+|.|.|==|=.+..+|+- .++++++|-+.-
T Consensus 147 PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~------D~RV~aivP~Vid~LN~~~~l~h~y~~y 220 (367)
T PF10142_consen 147 PMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV------DPRVKAIVPIVIDVLNMKANLEHQYRSY 220 (367)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc------CcceeEEeeEEEccCCcHHHHHHHHHHh
Confidence 34556667777777777665 2333689999999988888872 456666554221
Q ss_pred --CCCCccc--------------------------cccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEE
Q 007311 532 --FALHSAE--------------------------FEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIE 583 (608)
Q Consensus 532 --~~~~~~~--------------------------~~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~ 583 (608)
..+.... .-..++.+|-++|.|. .|....+..+.-..+.++......+.
T Consensus 221 G~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~at---gDeFf~pD~~~~y~d~L~G~K~lr~v 297 (367)
T PF10142_consen 221 GGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINAT---GDEFFVPDSSNFYYDKLPGEKYLRYV 297 (367)
T ss_pred CCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecC---CCceeccCchHHHHhhCCCCeeEEeC
Confidence 1111110 1235779999999999 89999899999999999876456666
Q ss_pred eCCCCcCCCChhhHHHHHHHHHHh
Q 007311 584 HDCGHIIPTRSPYIDEIKSFLQRF 607 (608)
Q Consensus 584 ~~gGH~ip~~~~~~~~i~~Fl~~~ 607 (608)
.+.+|..-. ...++.+..|+.+.
T Consensus 298 PN~~H~~~~-~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 298 PNAGHSLIG-SDVVQSLRAFYNRI 320 (367)
T ss_pred CCCCcccch-HHHHHHHHHHHHHH
Confidence 788999766 56788899998764
No 296
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=78.59 E-value=24 Score=43.17 Aligned_cols=57 Identities=26% Similarity=0.422 Sum_probs=40.7
Q ss_pred ccHHHHHHHHHHHHhH---hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCC
Q 007311 475 DGLDVSLAYLKTIFSQ---EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALH 535 (608)
Q Consensus 475 ~~l~~s~~~L~~~i~~---~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~ 535 (608)
++++....+..+.|.+ .||+ .|.|||.|+.++..+|...+....+ ..+|++-|.+..
T Consensus 2162 dSies~A~~yirqirkvQP~GPY-rl~GYSyG~~l~f~ma~~Lqe~~~~---~~lillDGspty 2221 (2376)
T KOG1202|consen 2162 DSIESLAAYYIRQIRKVQPEGPY-RLAGYSYGACLAFEMASQLQEQQSP---APLILLDGSPTY 2221 (2376)
T ss_pred chHHHHHHHHHHHHHhcCCCCCe-eeeccchhHHHHHHHHHHHHhhcCC---CcEEEecCchHH
Confidence 4577777777777766 3566 7999999999999999876643322 237787776644
No 297
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=77.38 E-value=14 Score=40.20 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=65.2
Q ss_pred CCCcccccccccHHHHHHHHHHHH------hHhC--CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc
Q 007311 465 FDPHQYQQQTDGLDVSLAYLKTIF------SQEG--PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS 536 (608)
Q Consensus 465 ~d~~~~~~~~~~l~~s~~~L~~~i------~~~~--~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~ 536 (608)
+.|..-.=|.-|+=+|++.|-.+. ...+ ...+.+|.|-||.+|...|.-. +.-+.++|=-|+|..+.
T Consensus 148 l~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~a-----P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 148 LIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIA-----PWLFDGVIDNSSYALPP 222 (403)
T ss_pred ecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhC-----ccceeEEEecCccccch
Confidence 344332234455555555544333 2222 2446789999999999988743 45566666666665443
Q ss_pred cc-------------------------------------------------------------cccCC-CCCCEEEEEcC
Q 007311 537 AE-------------------------------------------------------------FEHRS-INCPSLHIFGG 554 (608)
Q Consensus 537 ~~-------------------------------------------------------------~~~~~-i~~PvL~i~G~ 554 (608)
.. .+... -++=.+..|+.
T Consensus 223 l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~ 302 (403)
T PF11144_consen 223 LRYIFGREIDFMKYICSGEFFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSI 302 (403)
T ss_pred hheeeeeecCcccccccccccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEecc
Confidence 21 01111 23445667898
Q ss_pred CCCCCcccchHHHHHHHHHhccC
Q 007311 555 DLGNDRQVANQASKELAKAFEEG 577 (608)
Q Consensus 555 ~~~~D~~Vp~~~~~~l~~~~~~~ 577 (608)
.|+.+|.+.-+++++.++.-
T Consensus 303 ---~D~~~p~~~K~~l~~~l~~l 322 (403)
T PF11144_consen 303 ---KDDLAPAEDKEELYEILKNL 322 (403)
T ss_pred ---CCCCCCHHHHHHHHHHHHHc
Confidence 89999999999999988853
No 298
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=77.13 E-value=2.1 Score=33.96 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=12.9
Q ss_pred CCCCccEEEEecCCCCChHHHH
Q 007311 368 VCRRKLRILCLHGFRQNASSFK 389 (608)
Q Consensus 368 ~~~~~~~iLlLHG~G~na~~f~ 389 (608)
...+++.+|+.||+.+++..|.
T Consensus 39 ~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 39 QNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp TTTT--EEEEE--TT--GGGGC
T ss_pred cCCCCCcEEEECCcccChHHHH
Confidence 3466788999999999999885
No 299
>PLN02324 triacylglycerol lipase
Probab=75.76 E-value=4.1 Score=44.42 Aligned_cols=36 Identities=22% Similarity=0.124 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhHhCC---ceEEEecChhHHHHHHHHHHH
Q 007311 479 VSLAYLKTIFSQEGP---FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 479 ~s~~~L~~~i~~~~~---~~~IlGFSQGa~vAl~la~~~ 514 (608)
+.+..|.+++.+... .+.|.|||+||+||+..|...
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 344456666665432 346899999999999998754
No 300
>PLN02310 triacylglycerol lipase
Probab=75.65 E-value=7.1 Score=42.50 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhHh---CC--ceEEEecChhHHHHHHHHHHHh
Q 007311 479 VSLAYLKTIFSQE---GP--FDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 479 ~s~~~L~~~i~~~---~~--~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.++.|.++++.. ++ ...|.|||+||++|+..|....
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHH
Confidence 3444455555432 22 3468999999999999887653
No 301
>PLN02802 triacylglycerol lipase
Probab=75.27 E-value=7.9 Score=43.20 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhHhC---CceEEEecChhHHHHHHHHHHHh
Q 007311 479 VSLAYLKTIFSQEG---PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 479 ~s~~~L~~~i~~~~---~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.++.|.+++++.. ..+.|.|||+||++|+..|....
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 34445566665543 13468999999999999988664
No 302
>PLN02934 triacylglycerol lipase
Probab=73.88 E-value=7.3 Score=43.46 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHH
Q 007311 478 DVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+....|++.+++... ...|.|||+||++|+.++...
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHH
Confidence 3445556666665543 346889999999999988643
No 303
>PLN02719 triacylglycerol lipase
Probab=73.66 E-value=4.8 Score=44.93 Aligned_cols=38 Identities=21% Similarity=0.200 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhHhC------CceEEEecChhHHHHHHHHHHHh
Q 007311 478 DVSLAYLKTIFSQEG------PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~------~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
++.+..|.+++++.. ..+.|.|||+||+||+..|....
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~ 320 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVA 320 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHH
Confidence 344555666665432 13468999999999999987654
No 304
>PLN03037 lipase class 3 family protein; Provisional
Probab=73.50 E-value=15 Score=41.23 Aligned_cols=21 Identities=29% Similarity=0.165 Sum_probs=17.8
Q ss_pred eEEEecChhHHHHHHHHHHHh
Q 007311 495 DGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 495 ~~IlGFSQGa~vAl~la~~~~ 515 (608)
..|.|||+||+||+..|....
T Consensus 320 ItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 320 LTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred EEEeccCHHHHHHHHHHHHHH
Confidence 468999999999999987553
No 305
>PLN02753 triacylglycerol lipase
Probab=71.77 E-value=5.6 Score=44.53 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhHhC------CceEEEecChhHHHHHHHHHHHh
Q 007311 477 LDVSLAYLKTIFSQEG------PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~------~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.++.++.|.+++++.. -.+.|.|||+||++|+..|....
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla 334 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIA 334 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHH
Confidence 4455566666666532 23468999999999999987553
No 306
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=71.11 E-value=11 Score=34.03 Aligned_cols=25 Identities=32% Similarity=0.614 Sum_probs=19.2
Q ss_pred cCCCeEEEEcCCCc-cHHH-HHHHHHh
Q 007311 204 LQGKHVLMYCTGGI-RCEM-ASAYVRS 228 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~-a~~~L~~ 228 (608)
.++++|+++|+.|+ ||.. +++||..
T Consensus 76 ~~~~~VlVHC~~G~~RS~~v~~~yl~~ 102 (138)
T smart00195 76 KKGGKVLVHCQAGVSRSATLIIAYLMK 102 (138)
T ss_pred cCCCeEEEECCCCCchHHHHHHHHHHH
Confidence 46789999999996 8775 5666654
No 307
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=71.07 E-value=11 Score=40.86 Aligned_cols=107 Identities=20% Similarity=0.124 Sum_probs=64.7
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHHcc-CCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 374 RILCLHGFRQNASSFKGRTASLAKKLK-NIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 374 ~iLlLHG~G~na~~f~~~~~~L~~~L~-~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
.|++.-|.-++-+.|..-++-+.+.-+ -.+-+||++-.|- +.+.|+... +.-+..
T Consensus 82 PIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyY---------------GeS~PFG~~-----s~k~~~---- 137 (492)
T KOG2183|consen 82 PIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYY---------------GESLPFGSQ-----SYKDAR---- 137 (492)
T ss_pred ceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhcc---------------ccCCCCcch-----hccChh----
Confidence 389999999999999876654433322 2567888875521 001111100 000000
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHh
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.-+.+ .-+|..+++.+.+..|++....+...++.+|=|-|||+|+++=+.++
T Consensus 138 --------hlgyL---tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 138 --------HLGYL---TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred --------hhccc---cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 00111 11345677888888888776666656689999999999999887543
No 308
>PLN02162 triacylglycerol lipase
Probab=70.92 E-value=6.6 Score=43.39 Aligned_cols=36 Identities=22% Similarity=0.127 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHH
Q 007311 479 VSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 479 ~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~ 514 (608)
+..+.|.+.+.+... ...|.|||+||++|+.+|...
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHH
Confidence 344455566655443 346889999999999987643
No 309
>PLN00413 triacylglycerol lipase
Probab=70.42 E-value=7 Score=43.27 Aligned_cols=35 Identities=34% Similarity=0.267 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHH
Q 007311 479 VSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 479 ~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~ 513 (608)
+..+.|.+.+.+... ...|.|||+||++|...+..
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHH
Confidence 345556666666543 34688999999999998864
No 310
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=67.59 E-value=27 Score=37.72 Aligned_cols=61 Identities=13% Similarity=0.122 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHHHhHh----CCceEEEecChhHHHHHHHHHHHhhhh-----CCCCccEEEEecCCCCCc
Q 007311 476 GLDVSLAYLKTIFSQE----GPFDGILGFSQGAAMAASVCAQWERLK-----GEIDFRFAILCSGFALHS 536 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~----~~~~~IlGFSQGa~vAl~la~~~~~~~-----~~~~l~~vIlisG~~~~~ 536 (608)
..+..++.|..++.+. .....|.|-|-||..+-.+|....+.. ....|+|+++-+|+..+.
T Consensus 115 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 115 AAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred HHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 3444455555555543 223379999999999887777654322 157899999999998664
No 311
>PF11494 Ta0938: Ta0938; InterPro: IPR021585 Ta0938 is a protein of unknown function however the structure has been determined. The protein has a novel fold and a putative Zn-binding motif. The structure has two different parts, one region contains a beta sheet flanked by two alpha helices and the other contains a bundle of loops which contain all cysteines in the protein. ; PDB: 2FQH_A.
Probab=67.55 E-value=2 Score=36.58 Aligned_cols=32 Identities=31% Similarity=0.726 Sum_probs=12.7
Q ss_pred ccccCCCCccccccCCCCCccccceEEeCcccccc
Q 007311 278 GSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRME 312 (608)
Q Consensus 278 ~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~ 312 (608)
..|..||.||..|.. -.+=..||.||+.|...
T Consensus 15 ~~CalCG~tWg~~y~---Ev~G~rLfFCCd~ca~E 46 (105)
T PF11494_consen 15 MGCALCGATWGDYYE---EVDGERLFFCCDDCAKE 46 (105)
T ss_dssp GS-SS---S---SS----B-TT--BSSS--SSSS-
T ss_pred ccccccCCcHHHHHH---hhcCCEEEEEcHHHHHH
Confidence 469999999988753 23455777788877753
No 312
>PLN02761 lipase class 3 family protein
Probab=66.36 E-value=8.2 Score=43.20 Aligned_cols=37 Identities=24% Similarity=0.177 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhHhC-------CceEEEecChhHHHHHHHHHHHh
Q 007311 479 VSLAYLKTIFSQEG-------PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 479 ~s~~~L~~~i~~~~-------~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.+..|.++++..+ ..+.|.|||+||+||+..|....
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHH
Confidence 34555555555431 23468999999999999987553
No 313
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=66.16 E-value=7.4 Score=44.01 Aligned_cols=125 Identities=19% Similarity=0.145 Sum_probs=71.3
Q ss_pred cHHHHHHHHHHHHhHh---CCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCc----------------
Q 007311 476 GLDVSLAYLKTIFSQE---GPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHS---------------- 536 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~---~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~---------------- 536 (608)
.+++...-+.+++.+. ....+|-|=|.||.+....+-++ +..++++|+-.+...+.
T Consensus 480 vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr-----PelfgA~v~evPllDMlRYh~l~aG~sW~~EYG 554 (648)
T COG1505 480 VFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR-----PELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYG 554 (648)
T ss_pred hhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC-----hhhhCceeeccchhhhhhhcccccchhhHhhcC
Confidence 3444444444444432 24568999999998877666543 34455544422222111
Q ss_pred ----cc------------c-ccCCCCCCEEEEEcCCCCCCcccchHHHHHHHHHhccCC--cEE-EEeCCCCcCCCChh-
Q 007311 537 ----AE------------F-EHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGC--SVI-IEHDCGHIIPTRSP- 595 (608)
Q Consensus 537 ----~~------------~-~~~~i~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~--~~v-v~~~gGH~ip~~~~- 595 (608)
++ . .....=-|+|+-.+. .|..|.+.+++.++..+.+.. +.+ +.-++||.--.+..
T Consensus 555 ~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~---~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~ 631 (648)
T COG1505 555 NPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSL---HDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAE 631 (648)
T ss_pred CCCCHHHHHHHHhcCchhcCCccccCCCeEEEccc---ccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHH
Confidence 00 0 112334678888998 677777889998887777532 222 22367998544322
Q ss_pred ---hHHHHHHHHHHhC
Q 007311 596 ---YIDEIKSFLQRFL 608 (608)
Q Consensus 596 ---~~~~i~~Fl~~~L 608 (608)
+...+..||.+.|
T Consensus 632 ~A~~~a~~~afl~r~L 647 (648)
T COG1505 632 IARELADLLAFLLRTL 647 (648)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4556677887765
No 314
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=65.86 E-value=21 Score=33.58 Aligned_cols=27 Identities=33% Similarity=0.443 Sum_probs=18.1
Q ss_pred CCeEEEEcCCCc-cHHHHHHHHHhcCCCC
Q 007311 206 GKHVLMYCTGGI-RCEMASAYVRSKGAGF 233 (608)
Q Consensus 206 ~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf 233 (608)
..+|+++|+.|. |.-.++++|... .|.
T Consensus 124 ~~p~l~HC~aGKDRTG~~~alll~~-lGV 151 (164)
T PF13350_consen 124 PGPVLFHCTAGKDRTGVVAALLLSL-LGV 151 (164)
T ss_dssp T--EEEE-SSSSSHHHHHHHHHHHH-TT-
T ss_pred CCcEEEECCCCCccHHHHHHHHHHH-cCC
Confidence 369999999886 888888887765 464
No 315
>PRK04023 DNA polymerase II large subunit; Validated
Probab=63.46 E-value=5.1 Score=47.75 Aligned_cols=45 Identities=27% Similarity=0.595 Sum_probs=36.0
Q ss_pred cccCCCCccccccCCCCCccccc---eEEeCccccccccccccchhhhcCCC
Q 007311 279 SCLLCSSSFDDYSSRCRCTHCRM---LVLVCDTCRMEGAQYVCELCRKHGKS 327 (608)
Q Consensus 279 ~C~~C~~~~~~~~~~c~~~~C~~---l~l~C~~C~~~~~~~~c~~c~~~~~~ 327 (608)
.|..||.... ...|+.|.. ..-.|+.|......+.|+.|......
T Consensus 628 fCpsCG~~t~----~frCP~CG~~Te~i~fCP~CG~~~~~y~CPKCG~El~~ 675 (1121)
T PRK04023 628 KCPSCGKETF----YRRCPFCGTHTEPVYRCPRCGIEVEEDECEKCGREPTP 675 (1121)
T ss_pred cCCCCCCcCC----cccCCCCCCCCCcceeCccccCcCCCCcCCCCCCCCCc
Confidence 7999999862 356789986 48899999988888889999876643
No 316
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.39 E-value=13 Score=33.39 Aligned_cols=22 Identities=27% Similarity=0.348 Sum_probs=17.9
Q ss_pred CCCeEEEEcCCCccHHHHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYV 226 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L 226 (608)
...+|+-||++|.||...-.+-
T Consensus 86 aegPVlayCrsGtRs~~ly~~~ 107 (130)
T COG3453 86 AEGPVLAYCRSGTRSLNLYGLG 107 (130)
T ss_pred hCCCEEeeecCCchHHHHHHHH
Confidence 5679999999999998765443
No 317
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=61.33 E-value=26 Score=37.48 Aligned_cols=80 Identities=14% Similarity=0.063 Sum_probs=52.9
Q ss_pred HHHHHHHHHhHh--CC-ceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---cccCCCCCCEEEEEc
Q 007311 480 SLAYLKTIFSQE--GP-FDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---FEHRSINCPSLHIFG 553 (608)
Q Consensus 480 s~~~L~~~i~~~--~~-~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---~~~~~i~~PvL~i~G 553 (608)
+=..|.+.|.+. +. .+.|+|||+||.+.........+.....-+.-++++++..+.... .....+.-.+.=+|-
T Consensus 204 aG~~LA~~L~~~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS 283 (345)
T PF05277_consen 204 AGKVLADALLSRNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYS 283 (345)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEec
Confidence 334455555542 32 357999999999999888766543223346779999887766543 123456677888898
Q ss_pred CCCCCCccc
Q 007311 554 GDLGNDRQV 562 (608)
Q Consensus 554 ~~~~~D~~V 562 (608)
+ +|-+.
T Consensus 284 ~---~D~vL 289 (345)
T PF05277_consen 284 E---NDWVL 289 (345)
T ss_pred C---cHHHH
Confidence 8 78764
No 318
>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=58.31 E-value=13 Score=37.87 Aligned_cols=40 Identities=10% Similarity=0.181 Sum_probs=28.3
Q ss_pred cccHHHHHHHHHHHHhHhC--CceEEEecChhHHHHHHHHHH
Q 007311 474 TDGLDVSLAYLKTIFSQEG--PFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~~~--~~~~IlGFSQGa~vAl~la~~ 513 (608)
+.-+.+++..+.+...+.- .+..+.|.|--..|.+.+..+
T Consensus 234 s~ffpEAIsfIdeArsk~cgvLVHClaGISRSvTvtvaYLMq 275 (343)
T KOG1717|consen 234 SQFFPEAISFIDEARSKNCGVLVHCLAGISRSVTVTVAYLMQ 275 (343)
T ss_pred hhhhHHHHHHHHHhhccCCcEEEeeeccccchhHHHHHHHHH
Confidence 3457888888888776653 223488999988887776664
No 319
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=55.77 E-value=45 Score=30.21 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=45.0
Q ss_pred EeEeccCCCChHHHHHHHHHHhHhcCCeeEEEEccCCcce-eeecchHhHHHHHHH-HHh
Q 007311 15 LYYKYSTIPDLNSLFTFYESNCSQLGLLGRVRLAPHGVNV-TVGGKLSSLESHIDA-VKS 72 (608)
Q Consensus 15 ~~Y~~~~i~d~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~-t~~g~~~~~~~~~~~-~~~ 72 (608)
..|+.-+|.+| ..|..+...++.|+|+|-+++.+ +.|- -|=|...+++.|... |+.
T Consensus 2 ~~~~I~~L~~p-~~R~kI~~nA~ql~LtG~~~~g~-~pgiIvvEG~~k~i~~y~~lmlrr 59 (128)
T PF06544_consen 2 YVHHIKSLSNP-KKRFKIDKNAKQLHLTGFCLPGP-KPGIIVVEGGEKSIKEYKKLMLRR 59 (128)
T ss_pred EEEEeCcccCH-HHHHHHHHHHHHhCCeEEEEEcC-CcEEEEEECCHHHHHHHHHHHhce
Confidence 46888889998 67777888999999999999885 5554 346788899999998 543
No 320
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=54.91 E-value=54 Score=33.73 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=32.8
Q ss_pred CCcccchHHHHHHHHHhccCCcEEEEeCCCCcC---CCChhhHHHHHHHHHH
Q 007311 558 NDRQVANQASKELAKAFEEGCSVIIEHDCGHII---PTRSPYIDEIKSFLQR 606 (608)
Q Consensus 558 ~D~~Vp~~~~~~l~~~~~~~~~~vv~~~gGH~i---p~~~~~~~~i~~Fl~~ 606 (608)
+|..||......+.+.-++ +++....+||.- -....+..+|.+-|.+
T Consensus 316 ~D~Yipr~gv~~lQ~~WPg--~eVr~~egGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 316 EDAYIPRTGVRSLQEIWPG--CEVRYLEGGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred CCccccccCcHHHHHhCCC--CEEEEeecCceeeeehhchHHHHHHHHHHHh
Confidence 8999998777888888777 666666699972 2223456666666654
No 321
>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=53.80 E-value=20 Score=41.44 Aligned_cols=74 Identities=27% Similarity=0.418 Sum_probs=57.4
Q ss_pred HHHHHHHHHhHhcCCeeEEEEccCCcceeeecchHhHHHHHHHHHh-CCCCCCcccccccCCCCCCCCccccCCccccce
Q 007311 27 SLFTFYESNCSQLGLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKS-ISLFEGTDFKLASSDYPLNGKVAHECGFTSLSI 105 (608)
Q Consensus 27 ~~~~~~~~~~~~~~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~-~~~f~~~~~k~~~~~~~~~~~~~~~~~F~~l~v 105 (608)
.+|-+.+++++.++|+|-|+=-..|+---|-|..++++.|++.|+. .|.++.++ |+....-+ ...|..+++
T Consensus 13 GFRPFVyrlA~~~~L~G~V~N~g~gVeI~v~~~~~~~e~Fi~~L~~~~PPLarI~-~~~i~~~~-------~~~f~~F~I 84 (750)
T COG0068 13 GFRPFVYRLAQKLGLKGYVRNDGDGVEIVLEGDEENLEEFLNRLKKEKPPLARIE-KVEIEEIS-------ESGFTDFRI 84 (750)
T ss_pred cccHHHHHHHHHcCCceEEecCCCeEEEEEecCcccHHHHHHHHhhcCCchhhhh-hhhccccc-------cccCCceEE
Confidence 3688999999999999999999999999999999999999999987 47777665 32221111 224777776
Q ss_pred eee
Q 007311 106 RIV 108 (608)
Q Consensus 106 r~~ 108 (608)
+-.
T Consensus 85 ~~S 87 (750)
T COG0068 85 RKS 87 (750)
T ss_pred Eec
Confidence 643
No 322
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=53.49 E-value=6.1 Score=41.70 Aligned_cols=80 Identities=14% Similarity=0.070 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc------------------
Q 007311 477 LDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE------------------ 538 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~------------------ 538 (608)
++..+++-.+.+.-...-.+|.|+|-||--++++|..+ +.++++|+-+.|-...+.
T Consensus 295 ~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~Y------PdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiR 368 (517)
T KOG1553|consen 295 ADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNY------PDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIR 368 (517)
T ss_pred HHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcC------CCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHH
Confidence 44444444344332333346889999999999999854 469999998887433221
Q ss_pred --------cccCCCCCCEEEEEcCCCCCCcccchH
Q 007311 539 --------FEHRSINCPSLHIFGGDLGNDRQVANQ 565 (608)
Q Consensus 539 --------~~~~~i~~PvL~i~G~~~~~D~~Vp~~ 565 (608)
+....-+-|+.+|--. +|.+|...
T Consensus 369 nh~NLnnaell~ry~GPi~lIRRt---~dEIitt~ 400 (517)
T KOG1553|consen 369 NHMNLNNAELLARYKGPIRLIRRT---QDEIITTA 400 (517)
T ss_pred HhcccchHHHHHhhcCchhHhhhh---hHhhhhcc
Confidence 2234567899999888 78877544
No 323
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=53.13 E-value=18 Score=38.57 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=22.4
Q ss_pred HHHHHhHhCCc-eEEEecChhHHHHHHHHHHHh
Q 007311 484 LKTIFSQEGPF-DGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 484 L~~~i~~~~~~-~~IlGFSQGa~vAl~la~~~~ 515 (608)
+.+++...... +.|-|||+||+||...|....
T Consensus 161 ~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~ 193 (336)
T KOG4569|consen 161 LRRLIELYPNYSIWVTGHSLGGALASLAALDLV 193 (336)
T ss_pred HHHHHHhcCCcEEEEecCChHHHHHHHHHHHHH
Confidence 33444444433 358899999999999998664
No 324
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=52.97 E-value=49 Score=34.18 Aligned_cols=38 Identities=21% Similarity=0.313 Sum_probs=25.5
Q ss_pred cHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 476 GLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 476 ~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+..++.+|.+.. +.+....|+|||-||..|=.++-..
T Consensus 76 ~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 76 RIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 3445555544433 2345556999999999999888765
No 325
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=50.22 E-value=5.3 Score=46.79 Aligned_cols=47 Identities=28% Similarity=0.579 Sum_probs=0.0
Q ss_pred ccccCCCCccccccCCCCCccccce---EEeCccccccccccccchhhhcCCCC
Q 007311 278 GSCLLCSSSFDDYSSRCRCTHCRML---VLVCDTCRMEGAQYVCELCRKHGKSI 328 (608)
Q Consensus 278 ~~C~~C~~~~~~~~~~c~~~~C~~l---~l~C~~C~~~~~~~~c~~c~~~~~~~ 328 (608)
-.|..||..+-. +.|+.|... +..|+.|........|+.|.....+.
T Consensus 656 r~Cp~Cg~~t~~----~~Cp~CG~~T~~~~~Cp~C~~~~~~~~C~~C~~~~~~~ 705 (900)
T PF03833_consen 656 RRCPKCGKETFY----NRCPECGSHTEPVYVCPDCGIEVEEDECPKCGRETTSY 705 (900)
T ss_dssp ------------------------------------------------------
T ss_pred ccCcccCCcchh----hcCcccCCccccceeccccccccCccccccccccCccc
Confidence 369999988632 446667554 89999999877777899998776543
No 326
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=49.80 E-value=16 Score=35.09 Aligned_cols=25 Identities=40% Similarity=0.733 Sum_probs=17.7
Q ss_pred cCCCeEEEEcCCCc-cHHH-HHHHHHh
Q 007311 204 LQGKHVLMYCTGGI-RCEM-ASAYVRS 228 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~-a~~~L~~ 228 (608)
.++++|++.|.+|+ |+.. +++||..
T Consensus 103 ~~g~kVvVHC~~GigRSgtviaA~lm~ 129 (180)
T COG2453 103 SKGKKVVVHCQGGIGRSGTVIAAYLML 129 (180)
T ss_pred hcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 46779999999996 6664 4445544
No 327
>TIGR02689 ars_reduc_gluta arsenate reductase, glutathione/glutaredoxin type. Members of this protein family represent a novel form of arsenate reductase, using glutathione and glutaredoxin rather than thioredoxin for reducing equivalents as do some homologous arsenate reductases. An example of this type is Synechocystis sp. strain PCC 6803 slr0946, and of latter type (excluded from this model) is Staphylococcus aureus plasmid pI258 ArsC. Both are among the subset of arsenate reductases that belong the the low-molecular-weight protein-tyrosine phosphatase superfamily.
Probab=49.69 E-value=21 Score=32.09 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=25.5
Q ss_pred CeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHH
Q 007311 207 KHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQ 244 (608)
Q Consensus 207 k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~ 244 (608)
++|++.|++.+ ||-+|-++|++. +-.++.....|+.
T Consensus 1 ~~vlfvC~~N~cRS~mAEa~~~~~--~~~~~~v~SAG~~ 37 (126)
T TIGR02689 1 KKVMFVCKRNSCRSQMAEGFAKTL--GAGNIAVTSAGLE 37 (126)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHHh--cCCCEEEEcCcCC
Confidence 57999999874 899999999986 3234444445543
No 328
>PRK11391 etp phosphotyrosine-protein phosphatase; Provisional
Probab=48.41 E-value=16 Score=33.89 Aligned_cols=23 Identities=30% Similarity=0.716 Sum_probs=20.4
Q ss_pred CeEEEEcCCCc-cHHHHHHHHHhc
Q 007311 207 KHVLMYCTGGI-RCEMASAYVRSK 229 (608)
Q Consensus 207 k~Iv~yCtgGi-R~~~a~~~L~~~ 229 (608)
++|++.|+|.+ ||-+|-++|++.
T Consensus 3 ~~ILfVC~gN~cRSpmAEa~~~~~ 26 (144)
T PRK11391 3 NSILVVCTGNICRSPIGERLLRKR 26 (144)
T ss_pred CeEEEEcCCcHhHHHHHHHHHHHh
Confidence 58999999875 899999999986
No 329
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=48.39 E-value=25 Score=40.21 Aligned_cols=42 Identities=14% Similarity=0.013 Sum_probs=27.3
Q ss_pred CCceEEEecChhHHHHHHHHHHHhhh---h---C----CCCccEEEEecCCC
Q 007311 492 GPFDGILGFSQGAAMAASVCAQWERL---K---G----EIDFRFAILCSGFA 533 (608)
Q Consensus 492 ~~~~~IlGFSQGa~vAl~la~~~~~~---~---~----~~~l~~vIlisG~~ 533 (608)
+..++|+|||||+.+++.+....... . + ..-++.+|.++|..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 45678999999999999887643210 0 0 12356677777643
No 330
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=48.06 E-value=59 Score=35.96 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhHhCC----ceEEEecChhHHHHHHHHHHHhhhh-----CCCCccEEEEecCCCCC
Q 007311 478 DVSLAYLKTIFSQEGP----FDGILGFSQGAAMAASVCAQWERLK-----GEIDFRFAILCSGFALH 535 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~----~~~IlGFSQGa~vAl~la~~~~~~~-----~~~~l~~vIlisG~~~~ 535 (608)
++.++.|..++.+... ...|.|-|-||..+-.+|....+.. ....++|+++-.|+..+
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 4566666666655322 2379999999987777776553211 24689999998887644
No 331
>COG0394 Wzb Protein-tyrosine-phosphatase [Signal transduction mechanisms]
Probab=47.99 E-value=24 Score=32.60 Aligned_cols=37 Identities=41% Similarity=0.486 Sum_probs=29.1
Q ss_pred CeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHH
Q 007311 207 KHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQR 245 (608)
Q Consensus 207 k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~ 245 (608)
++|++.|+|.+ ||-+|-+++++. .+ .++..-..|..+
T Consensus 3 ~kVLFVC~gN~cRSpmAE~l~~~~-~~-~~~~v~SAGt~~ 40 (139)
T COG0394 3 MKVLFVCTGNICRSPMAEALLRHL-AP-DNVEVDSAGTGG 40 (139)
T ss_pred ceEEEEcCCCcccCHHHHHHHHHh-cc-CCeEEECCccCC
Confidence 68999999875 999999999986 23 567776666544
No 332
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.46 E-value=76 Score=30.59 Aligned_cols=71 Identities=20% Similarity=0.120 Sum_probs=47.2
Q ss_pred EEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc---------------c----------ccCCCCCCEEE
Q 007311 496 GILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE---------------F----------EHRSINCPSLH 550 (608)
Q Consensus 496 ~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~---------------~----------~~~~i~~PvL~ 550 (608)
.+-|-||||..|+.+..+. +.-+.++|++||......- . ....-++-.++
T Consensus 104 ~~sgcsmGayhA~nfvfrh-----P~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~l~rlr~~~~vf 178 (227)
T COG4947 104 IVSGCSMGAYHAANFVFRH-----PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFRLERLRRIDMVF 178 (227)
T ss_pred cccccchhhhhhhhhheeC-----hhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHHHHHHhhccEEE
Confidence 4679999999999999865 4457789999997653210 0 01112345677
Q ss_pred EEcCCCCCCcccchHHHHHHHHHhcc
Q 007311 551 IFGGDLGNDRQVANQASKELAKAFEE 576 (608)
Q Consensus 551 i~G~~~~~D~~Vp~~~~~~l~~~~~~ 576 (608)
+.|. .|+..+ .-++|.+.+.+
T Consensus 179 c~G~---e~~~L~--~~~~L~~~l~d 199 (227)
T COG4947 179 CIGD---EDPFLD--NNQHLSRLLSD 199 (227)
T ss_pred EecC---cccccc--chHHHHHHhcc
Confidence 7787 677665 45667777765
No 333
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=45.19 E-value=23 Score=39.56 Aligned_cols=42 Identities=12% Similarity=0.098 Sum_probs=38.0
Q ss_pred CCeeEEEEccCCcceeeecchHhHHHHHHHHHhCCCCCCccc
Q 007311 40 GLLGRVRLAPHGVNVTVGGKLSSLESHIDAVKSISLFEGTDF 81 (608)
Q Consensus 40 ~l~Gri~ia~eGiN~t~~g~~~~~~~~~~~~~~~~~f~~~~~ 81 (608)
.+-||+|||.||+|--+-.+..-.++.+.||-.-|+|++++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~f~~k~~~~l~~~pl~~~~~~ 56 (535)
T PRK15375 15 SNDARLYIAKENTDKAYVAPEKFSSKVLTWLGKMPLFKNTEV 56 (535)
T ss_pred ccCceEEEeeCCCCeEEEchhhHHHHHHHHHhcCccccchHH
Confidence 458999999999999998888889999999999999998874
No 334
>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]
Probab=44.37 E-value=51 Score=36.10 Aligned_cols=88 Identities=20% Similarity=0.270 Sum_probs=48.7
Q ss_pred CCcEEEecCChhhhhccccCCCCccccCcccccCCCchHH----HHhhhh-------h---cCCCeEEEEcCCCccHH--
Q 007311 157 KKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTW----IDNNAE-------Q---LQGKHVLMYCTGGIRCE-- 220 (608)
Q Consensus 157 ~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~----~~~~~~-------~---~k~k~Iv~yCtgGiR~~-- 220 (608)
-+..++|+|....|..||+.. +++....-+-+-|.. +...+. . .-+..+.+.= +| |-|
T Consensus 325 VrFFiVDcRpaeqynaGHlst----aFhlDc~lmlqeP~~Fa~av~sLl~aqrqtie~~s~aggeHlcfmG-sG-r~EED 398 (669)
T KOG3636|consen 325 VRFFIVDCRPAEQYNAGHLST----AFHLDCVLMLQEPEKFAIAVNSLLCAQRQTIERDSNAGGEHLCFMG-SG-RDEED 398 (669)
T ss_pred eEEEEEeccchhhcccccchh----hhcccHHHHhcCHHHHHHHHHHHHHHHHHhhhccccCCcceEEEec-cC-cchHH
Confidence 456799999999999999986 444332212222322 221111 0 1123443332 22 322
Q ss_pred ----HHHHHHHhcCCCCCcEEEcCccHHHHHHhCCC
Q 007311 221 ----MASAYVRSKGAGFENVFQLYGGIQRYLEQFPD 252 (608)
Q Consensus 221 ----~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~~~ 252 (608)
+..+.+.+| +-..|-.+.||+.+....+++
T Consensus 399 ~YmnMviA~FlQK--nk~yVS~~~GGy~~lh~~~~d 432 (669)
T KOG3636|consen 399 NYMNMVIAMFLQK--NKLYVSFVQGGYKKLHDYFGD 432 (669)
T ss_pred HHHHHHHHHHHhc--CceEEEEecchHHHHHHHhhh
Confidence 233333444 555688999999888877664
No 335
>PRK10126 tyrosine phosphatase; Provisional
Probab=44.33 E-value=19 Score=33.35 Aligned_cols=23 Identities=26% Similarity=0.563 Sum_probs=20.6
Q ss_pred CeEEEEcCCCc-cHHHHHHHHHhc
Q 007311 207 KHVLMYCTGGI-RCEMASAYVRSK 229 (608)
Q Consensus 207 k~Iv~yCtgGi-R~~~a~~~L~~~ 229 (608)
++|++.|+|.+ ||-+|-++|++.
T Consensus 3 ~~iLFVC~gN~cRSpmAEa~~~~~ 26 (147)
T PRK10126 3 NNILVVCVGNICRSPTAERLLQRY 26 (147)
T ss_pred CeEEEEcCCcHhHHHHHHHHHHHh
Confidence 58999999885 899999999986
No 336
>PRK13530 arsenate reductase; Provisional
Probab=44.18 E-value=30 Score=31.55 Aligned_cols=36 Identities=28% Similarity=0.483 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccH
Q 007311 206 GKHVLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGI 243 (608)
Q Consensus 206 ~k~Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi 243 (608)
.++|++.|++.+ ||-+|-++|++. .| .++.....|+
T Consensus 3 ~~~vLFvC~~N~cRS~mAEal~~~~-~~-~~~~v~SAG~ 39 (133)
T PRK13530 3 KKTIYFLCTGNSCRSQMAEGWGKQY-LG-DKWNVYSAGI 39 (133)
T ss_pred CCEEEEEcCCchhHHHHHHHHHHHh-cC-CCEEEECCCC
Confidence 468999999875 899999999875 22 3444445554
No 337
>PRK12361 hypothetical protein; Provisional
Probab=43.50 E-value=42 Score=38.24 Aligned_cols=26 Identities=31% Similarity=0.465 Sum_probs=19.3
Q ss_pred cCCCeEEEEcCCCc-cHHH-HHHHHHhc
Q 007311 204 LQGKHVLMYCTGGI-RCEM-ASAYVRSK 229 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~-a~~~L~~~ 229 (608)
.++++|+++|..|. ||.. +++||..+
T Consensus 173 ~~~~~VlVHC~~G~sRSa~vv~ayLm~~ 200 (547)
T PRK12361 173 RANKSVVVHCALGRGRSVLVLAAYLLCK 200 (547)
T ss_pred HCCCeEEEECCCCCCcHHHHHHHHHHHh
Confidence 35789999999885 6664 57777654
No 338
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=43.31 E-value=2.1e+02 Score=27.65 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=26.6
Q ss_pred CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 493 PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 493 ~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
+...++|||.|..++-..+.+ ....+.-+|++++..
T Consensus 109 ~~~tv~GHSYGS~v~G~A~~~-----~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 109 AHLTVVGHSYGSTVVGLAAQQ-----GGLRVDDVVLVGSPG 144 (177)
T ss_pred CCEEEEEecchhHHHHHHhhh-----CCCCcccEEEECCCC
Confidence 445799999999999888764 235667788777544
No 339
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=42.08 E-value=17 Score=44.75 Aligned_cols=45 Identities=27% Similarity=0.600 Sum_probs=29.8
Q ss_pred ccccCCCCccccccCCCCCccccce---EEeCcccccccc-----ccccchhhhcCC
Q 007311 278 GSCLLCSSSFDDYSSRCRCTHCRML---VLVCDTCRMEGA-----QYVCELCRKHGK 326 (608)
Q Consensus 278 ~~C~~C~~~~~~~~~~c~~~~C~~l---~l~C~~C~~~~~-----~~~c~~c~~~~~ 326 (608)
-+|..||+.... +.|+.|... ...|+.|..+.. ..-|+.|-....
T Consensus 668 rkCPkCG~~t~~----~fCP~CGs~te~vy~CPsCGaev~~des~a~~CP~CGtplv 720 (1337)
T PRK14714 668 RRCPSCGTETYE----NRCPDCGTHTEPVYVCPDCGAEVPPDESGRVECPRCDVELT 720 (1337)
T ss_pred EECCCCCCcccc----ccCcccCCcCCCceeCccCCCccCCCccccccCCCCCCccc
Confidence 479999997632 367888765 568999986422 225777765543
No 340
>PF12156 ATPase-cat_bd: Putative metal-binding domain of cation transport ATPase; InterPro: IPR021993 This domain is found in bacteria, and is approximately 90 amino acids in length. It is found associated with PF00403 from PFAM, PF00122 from PFAM, PF00702 from PFAM. The cysteine-rich nature and composition suggest this might be a cation-binding domain; most members are annotated as being cation transport ATPases.
Probab=41.13 E-value=14 Score=31.41 Aligned_cols=10 Identities=20% Similarity=0.644 Sum_probs=9.0
Q ss_pred cccCCCCccc
Q 007311 279 SCLLCSSSFD 288 (608)
Q Consensus 279 ~C~~C~~~~~ 288 (608)
.|++||.|.+
T Consensus 2 ~C~HCg~~~p 11 (88)
T PF12156_consen 2 KCYHCGLPVP 11 (88)
T ss_pred CCCCCCCCCC
Confidence 6999999996
No 341
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=39.55 E-value=41 Score=35.95 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=30.8
Q ss_pred CcccCHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCC
Q 007311 129 GRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRT 177 (608)
Q Consensus 129 g~~lsp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g 177 (608)
...++++++.+++++.. ...+.+.++||||.+. |++.+|++
T Consensus 276 ~~~i~~~~~~~~l~~~~-------~~~~~~~~ll~vr~~~-~~~~~~~~ 316 (339)
T PRK07688 276 KEEYDLEELAELLRDRG-------LDVNVNPYLLSFSLEE-KRLVLFKD 316 (339)
T ss_pred cCccCHHHHHHHHHhcc-------cccCCCcEEEEEecCC-eEEEEEcC
Confidence 35799999999995320 0012578999999988 99999985
No 342
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=39.34 E-value=32 Score=31.35 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=20.6
Q ss_pred CCCccEEEEecCCCCChHHHHHHH
Q 007311 369 CRRKLRILCLHGFRQNASSFKGRT 392 (608)
Q Consensus 369 ~~~~~~iLlLHG~G~na~~f~~~~ 392 (608)
.+.||.+|-|||+-+++.+|..++
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~l 72 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRL 72 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHH
Confidence 467889999999999999998554
No 343
>smart00226 LMWPc Low molecular weight phosphatase family.
Probab=38.31 E-value=25 Score=32.03 Aligned_cols=36 Identities=33% Similarity=0.516 Sum_probs=26.2
Q ss_pred EEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHHHH
Q 007311 209 VLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQRY 246 (608)
Q Consensus 209 Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~~w 246 (608)
|++.|++.+ ||-+|.++|++.. + .++..-..|+..|
T Consensus 1 vLFVC~~N~cRSpmAEa~~~~~~-~-~~~~v~SAG~~~~ 37 (140)
T smart00226 1 ILFVCTGNICRSPMAEALFKAIV-G-DRVKIDSAGTGAW 37 (140)
T ss_pred CEEEeCChhhhHHHHHHHHHHhc-C-CCEEEEcCcccCC
Confidence 689999875 8999999999862 2 2455566666654
No 344
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=37.95 E-value=69 Score=34.84 Aligned_cols=32 Identities=19% Similarity=0.413 Sum_probs=23.6
Q ss_pred CCccEEEEecCCCC-ChHHHHHHHHHHHHHccC
Q 007311 370 RRKLRILCLHGFRQ-NASSFKGRTASLAKKLKN 401 (608)
Q Consensus 370 ~~~~~iLlLHG~G~-na~~f~~~~~~L~~~L~~ 401 (608)
..++.+++.||.-+ +.+.|...+....+..+.
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~ 110 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPD 110 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCc
Confidence 44578899999999 778888666666665554
No 345
>PF09992 DUF2233: Predicted periplasmic protein (DUF2233); InterPro: IPR018711 This entry contains proteins that catalyze the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides, this is achieved by removing GlcNAc residues from GlcNAc-alpha-P-mannose moieties, which are formed in the first step.; PDB: 3OHG_A.
Probab=37.66 E-value=37 Score=31.96 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=24.5
Q ss_pred cCCCeEEEEcCC-----CccHHHHHHHHHhcCCCCCcEEEcCccHHH
Q 007311 204 LQGKHVLMYCTG-----GIRCEMASAYVRSKGAGFENVFQLYGGIQR 245 (608)
Q Consensus 204 ~k~k~Iv~yCtg-----GiR~~~a~~~L~~~~~Gf~nV~~L~GGi~~ 245 (608)
.++.++++++.. |.--..++.+|++. |..+..+|+||-..
T Consensus 98 ~~~g~l~l~~vdg~~~~g~tl~ela~~l~~l--G~~~AinLDGGgSs 142 (170)
T PF09992_consen 98 TADGKLLLIVVDGRQSAGMTLDELAQLLKSL--GCVDAINLDGGGSS 142 (170)
T ss_dssp -TTSEEEEEEE----S--B-HHHHHHHHHHH--T-SEEEE---GGG-
T ss_pred eCCCcEEEEEEcCCcCCCCCHHHHHHHHHHc--CcCeEEEecCCcce
Confidence 456677777754 56666778899887 99999999999764
No 346
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=36.88 E-value=1.8e+02 Score=31.76 Aligned_cols=56 Identities=21% Similarity=0.115 Sum_probs=32.5
Q ss_pred cccHHHHHHHHHHHHhH-hCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCC
Q 007311 474 TDGLDVSLAYLKTIFSQ-EGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFAL 534 (608)
Q Consensus 474 ~~~l~~s~~~L~~~i~~-~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~ 534 (608)
.+++...+++++..... .....+++|=|-||++|+++-.++ +.-+.++|+=|+..-
T Consensus 93 LaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky-----P~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 93 LADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY-----PHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------TTT-SEEEEET--CC
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC-----CCeeEEEEeccceee
Confidence 44444444444433321 222337889999999999999865 456777777776553
No 347
>cd00115 LMWPc Substituted updates: Aug 22, 2001
Probab=36.25 E-value=37 Score=30.96 Aligned_cols=38 Identities=32% Similarity=0.384 Sum_probs=26.6
Q ss_pred CeEEEEcCCC-ccHHHHHHHHHhcCCCCCcEEEcCccHHH
Q 007311 207 KHVLMYCTGG-IRCEMASAYVRSKGAGFENVFQLYGGIQR 245 (608)
Q Consensus 207 k~Iv~yCtgG-iR~~~a~~~L~~~~~Gf~nV~~L~GGi~~ 245 (608)
++|++.|++. .||-+|.++|++...+ .++.....|+..
T Consensus 1 ~~iLfvc~~N~~RS~mAEai~~~~~~~-~~~~v~SaG~~~ 39 (141)
T cd00115 1 KKVLFVCTGNICRSPMAEAIFRHLAPK-LDIEVDSAGTSG 39 (141)
T ss_pred CeEEEEecChhhhhHHHHHHHHHHhhh-CCEEEECCCCCC
Confidence 3799999987 4899999999986111 145555566643
No 348
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=36.19 E-value=92 Score=35.50 Aligned_cols=39 Identities=18% Similarity=0.020 Sum_probs=25.4
Q ss_pred HhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 490 QEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 490 ~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
-.++++++.|=|-||.+.+.++++.-. .+-.-..|++++
T Consensus 466 ~TgEriv~aGDSAGgNL~~~VaLr~i~-~gvRvPDGl~la 504 (880)
T KOG4388|consen 466 STGERIVLAGDSAGGNLCFTVALRAIA-YGVRVPDGLMLA 504 (880)
T ss_pred cccceEEEeccCCCcceeehhHHHHHH-hCCCCCCceEEe
Confidence 346777899999999988888775432 122233555554
No 349
>PF01451 LMWPc: Low molecular weight phosphotyrosine protein phosphatase; InterPro: IPR023485 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents the low molecular weight (LMW) protein-tyrosine phosphatases (or acid phosphatase), which act on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates [, ]. The structure of a LMW PTPase has been solved by X-ray crystallography [] and is found to form a single structural domain. It belongs to the alpha/beta class, with 6 alpha-helices and 4 beta-strands forming a 3-layer alpha-beta-alpha sandwich architecture.; PDB: 3RH0_B 1JL3_B 2IPA_B 1Z2D_A 1Z2E_A 2CWD_D 2L18_A 2L17_A 2L19_A 1BVH_A ....
Probab=34.60 E-value=18 Score=32.77 Aligned_cols=38 Identities=26% Similarity=0.308 Sum_probs=27.0
Q ss_pred EEEEcCCC-ccHHHHHHHHHhcCC--CCCcEEEcCccHHHH
Q 007311 209 VLMYCTGG-IRCEMASAYVRSKGA--GFENVFQLYGGIQRY 246 (608)
Q Consensus 209 Iv~yCtgG-iR~~~a~~~L~~~~~--Gf~nV~~L~GGi~~w 246 (608)
|++.|+|+ -||-+|-++|++.-. +-.++.....|+.+|
T Consensus 1 ILFvC~~N~cRS~mAEai~~~~~~~~~~~~~~v~SAG~~~~ 41 (138)
T PF01451_consen 1 ILFVCTGNICRSPMAEAILRHLLKQRLGDRFEVESAGTEAW 41 (138)
T ss_dssp EEEEESSSSSHHHHHHHHHHHHHHHTHTTTEEEEEEESSST
T ss_pred CEEEeCCCcchHHHHHHHHHHhccccccCCcEEEEEeeccc
Confidence 78999986 489999999987500 124566667777655
No 350
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=34.05 E-value=1.2e+02 Score=31.90 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhHhCCc----eEEEecChhHHHHHHHHHHHhhhh-----CCCCccEEEEecCCCCCc
Q 007311 478 DVSLAYLKTIFSQEGPF----DGILGFSQGAAMAASVCAQWERLK-----GEIDFRFAILCSGFALHS 536 (608)
Q Consensus 478 ~~s~~~L~~~i~~~~~~----~~IlGFSQGa~vAl~la~~~~~~~-----~~~~l~~vIlisG~~~~~ 536 (608)
.+.+..|..++.+...+ ..|.|-|-||..+-.+|....+.. ....|+|+++=.|+..+.
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 99 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCcc
Confidence 56677777777654322 269999999987777776553211 235799999988877553
No 351
>PF15645 Tox-PLDMTX: Dermonecrotoxin of the Papain-like fold
Probab=32.98 E-value=26 Score=32.25 Aligned_cols=45 Identities=22% Similarity=0.440 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCCCCCcEEEcCccHHHHHHhC---CC-----CCeeceeeeeeeecc
Q 007311 219 CEMASAYVRSKGAGFENVFQLYGGIQRYLEQF---PD-----GGFFKGKNFVFDHRI 267 (608)
Q Consensus 219 ~~~a~~~L~~~~~Gf~nV~~L~GGi~~w~~~~---~~-----~~~~~G~~fVFD~R~ 267 (608)
+..++.+||++ ||+++.. +||.-|.... +. -..+.|+.||||--.
T Consensus 11 ~~~v~~~lk~~--g~~~~k~--~~l~~W~~~~~~~p~NH~vv~~k~~g~eyV~D~Ta 63 (135)
T PF15645_consen 11 MKEVADFLKDK--GYEDIKY--RGLLIWENANDDSPTNHFVVVAKKNGKEYVFDPTA 63 (135)
T ss_pred HHHHHHHHHhC--CCCccee--eEEEEecCCCccCCcceEEEEEEECCEEEEEeCcH
Confidence 34567789987 9977542 3455563321 11 124789999999543
No 352
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=30.39 E-value=58 Score=36.08 Aligned_cols=39 Identities=21% Similarity=0.106 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhH----hC-CceEEEecChhHHHHHHHHHHHh
Q 007311 477 LDVSLAYLKTIFSQ----EG-PFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 477 l~~s~~~L~~~i~~----~~-~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
.++....|+..|+. .+ ..+.|++||||+.+.+.+....+
T Consensus 161 rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 161 RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhccc
Confidence 44445555555543 45 56689999999999999887654
No 353
>PLN02209 serine carboxypeptidase
Probab=29.84 E-value=1e+02 Score=34.17 Aligned_cols=59 Identities=8% Similarity=0.046 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhHhCC----ceEEEecChhHHHHHHHHHHHhhh-----hCCCCccEEEEecCCCCC
Q 007311 477 LDVSLAYLKTIFSQEGP----FDGILGFSQGAAMAASVCAQWERL-----KGEIDFRFAILCSGFALH 535 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~----~~~IlGFSQGa~vAl~la~~~~~~-----~~~~~l~~vIlisG~~~~ 535 (608)
.++.++.|..+++.... ...|.|-|-||.-+-.+|....+. .....++|+++.+|+..+
T Consensus 147 a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 147 VKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 46666777777765432 236999999998777776654321 124679999999998754
No 354
>PRK00420 hypothetical protein; Validated
Probab=29.11 E-value=38 Score=30.13 Aligned_cols=24 Identities=13% Similarity=0.324 Sum_probs=15.6
Q ss_pred ccccCCCCcccc-ccCCCCCccccc
Q 007311 278 GSCLLCSSSFDD-YSSRCRCTHCRM 301 (608)
Q Consensus 278 ~~C~~C~~~~~~-~~~~c~~~~C~~ 301 (608)
..|..||.|.-+ +.+.+.|+.|..
T Consensus 24 ~~CP~Cg~pLf~lk~g~~~Cp~Cg~ 48 (112)
T PRK00420 24 KHCPVCGLPLFELKDGEVVCPVHGK 48 (112)
T ss_pred CCCCCCCCcceecCCCceECCCCCC
Confidence 479999999877 444444444444
No 355
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=28.90 E-value=3.2e+02 Score=27.93 Aligned_cols=18 Identities=17% Similarity=0.261 Sum_probs=15.2
Q ss_pred EEecChhHHHHHHHHHHH
Q 007311 497 ILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 497 IlGFSQGa~vAl~la~~~ 514 (608)
-+|||+|+.+-+.+....
T Consensus 94 ~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 94 GVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred eeecccchHHHHHHhhhc
Confidence 489999999998888754
No 356
>PHA00626 hypothetical protein
Probab=28.59 E-value=41 Score=25.97 Aligned_cols=28 Identities=29% Similarity=0.495 Sum_probs=19.7
Q ss_pred CCccccc-eEEeCccccccccccccchhh
Q 007311 295 RCTHCRM-LVLVCDTCRMEGAQYVCELCR 322 (608)
Q Consensus 295 ~~~~C~~-l~l~C~~C~~~~~~~~c~~c~ 322 (608)
.||.|.. .++-|..|+.....|.|..|-
T Consensus 2 ~CP~CGS~~Ivrcg~cr~~snrYkCkdCG 30 (59)
T PHA00626 2 SCPKCGSGNIAKEKTMRGWSDDYVCCDCG 30 (59)
T ss_pred CCCCCCCceeeeeceecccCcceEcCCCC
Confidence 3667766 467777777667777777775
No 357
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=28.55 E-value=27 Score=34.40 Aligned_cols=53 Identities=26% Similarity=0.421 Sum_probs=34.7
Q ss_pred CeeceeeeeeeeccccCCCCC------CccccccCCCCccccccCCCCCccccceEEeCccccc
Q 007311 254 GFFKGKNFVFDHRISVGSSDA------DIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRM 311 (608)
Q Consensus 254 ~~~~G~~fVFD~R~~~~~~~~------~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~ 311 (608)
+.++|.-+++-.|.+....+. ...-.|..|++|-..+.- - =+..+|.|.+|..
T Consensus 69 ~~~~~~~~ii~G~~~~~~i~~~l~~yi~~yV~C~~C~~pdT~l~k-~----~~~~~l~C~aCGa 127 (201)
T PRK12336 69 GKIEGGRAVFNGKFTEEDIQAAIDAYVDEYVICSECGLPDTRLVK-E----DRVLMLRCDACGA 127 (201)
T ss_pred ceecCCEEEEEeeeCHHHHHHHHHHHHHheEECCCCCCCCcEEEE-c----CCeEEEEcccCCC
Confidence 444555667776665332111 123579999999988762 1 1678999999985
No 358
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=28.28 E-value=68 Score=33.08 Aligned_cols=30 Identities=23% Similarity=0.270 Sum_probs=23.0
Q ss_pred HHHHHhHhCCceEEEecChhHHHHHHHHHH
Q 007311 484 LKTIFSQEGPFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 484 L~~~i~~~~~~~~IlGFSQGa~vAl~la~~ 513 (608)
|+.+.+...+++.|.|=|+||.++..+|..
T Consensus 29 L~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 29 LQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 334433345899999999999999998864
No 359
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=28.17 E-value=76 Score=36.20 Aligned_cols=65 Identities=18% Similarity=0.254 Sum_probs=42.9
Q ss_pred CCCCCCcccccccccHHHHHHHHHHHHhHhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCC
Q 007311 462 DGPFDPHQYQQQTDGLDVSLAYLKTIFSQEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFA 533 (608)
Q Consensus 462 ~~~~d~~~~~~~~~~l~~s~~~L~~~i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~ 533 (608)
+|.|++... +..++--+.+++|.+.=-.+|.+ +.+|.|-+|...+.+|+++ ++.+|.++-++|..
T Consensus 95 eG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~V-gm~G~SY~g~tq~~~Aa~~-----pPaLkai~p~~~~~ 159 (563)
T COG2936 95 EGVFDPESS-REAEDGYDTIEWLAKQPWSNGNV-GMLGLSYLGFTQLAAAALQ-----PPALKAIAPTEGLV 159 (563)
T ss_pred Ccccceecc-ccccchhHHHHHHHhCCccCCee-eeecccHHHHHHHHHHhcC-----Cchheeeccccccc
Confidence 344555433 34556667788887643334444 8999999999999999854 45666666655543
No 360
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=28.09 E-value=69 Score=27.45 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=26.4
Q ss_pred CCCeEEEEcCCCccHHHHHHHHHhc--CCCCCcEEEcCccHHHHHH
Q 007311 205 QGKHVLMYCTGGIRCEMASAYVRSK--GAGFENVFQLYGGIQRYLE 248 (608)
Q Consensus 205 k~k~Iv~yCtgGiR~~~a~~~L~~~--~~Gf~nV~~L~GGi~~w~~ 248 (608)
+.++|++.|.+|+-+..++..+++. ..|+ ++-.-..++....+
T Consensus 2 ~~~~ILl~C~~G~sSS~l~~k~~~~~~~~gi-~~~v~a~~~~~~~~ 46 (95)
T TIGR00853 2 NETNILLLCAAGMSTSLLVNKMNKAAEEYGV-PVKIAAGSYGAAGE 46 (95)
T ss_pred CccEEEEECCCchhHHHHHHHHHHHHHHCCC-cEEEEEecHHHHHh
Confidence 4579999999999877665555431 1265 34444455555443
No 361
>PRK03988 translation initiation factor IF-2 subunit beta; Validated
Probab=27.72 E-value=31 Score=31.87 Aligned_cols=56 Identities=20% Similarity=0.373 Sum_probs=35.7
Q ss_pred CCCCeeceeeeeeeeccccCCCCC------CccccccCCCCccccccCCCCCccccceEEeCccccc
Q 007311 251 PDGGFFKGKNFVFDHRISVGSSDA------DIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRM 311 (608)
Q Consensus 251 ~~~~~~~G~~fVFD~R~~~~~~~~------~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~ 311 (608)
+-.+.++|.-+++-.|.+-...+. ...-.|..|++|-..+.. .=+..+|.|.+|..
T Consensus 70 gt~g~i~~~~lii~G~~~~~~i~~~L~~yI~~yVlC~~C~spdT~l~k-----~~r~~~l~C~ACGa 131 (138)
T PRK03988 70 GTAGNIEGGRLILQGKFSPRVINEKIDRYVKEYVICPECGSPDTKLIK-----EGRIWVLKCEACGA 131 (138)
T ss_pred CCceeecCCEEEEEEeeCHHHHHHHHHHHHHhcEECCCCCCCCcEEEE-----cCCeEEEEcccCCC
Confidence 333334666677777765322111 124579999999988762 23467999999985
No 362
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=27.58 E-value=1.4e+02 Score=31.50 Aligned_cols=57 Identities=16% Similarity=0.178 Sum_probs=33.7
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhc------------cC------------CcEEEEeCCCCcCCCChh-hHHHH
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFE------------EG------------CSVIIEHDCGHIIPTRSP-YIDEI 600 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~------------~~------------~~~vv~~~gGH~ip~~~~-~~~~i 600 (608)
++||+..|. .|-+++.-..+++.+.+. +. -..+.+.++||++|..|+ -.+-+
T Consensus 234 i~VliY~Gd---~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~ 310 (319)
T PLN02213 234 YRSLIYSGD---HDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMF 310 (319)
T ss_pred ceEEEEECC---cCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHH
Confidence 567777777 677777766666665554 10 122333468999986443 23445
Q ss_pred HHHHH
Q 007311 601 KSFLQ 605 (608)
Q Consensus 601 ~~Fl~ 605 (608)
.+||.
T Consensus 311 ~~fi~ 315 (319)
T PLN02213 311 QRWIS 315 (319)
T ss_pred HHHHc
Confidence 55554
No 363
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=27.24 E-value=52 Score=35.45 Aligned_cols=56 Identities=16% Similarity=0.260 Sum_probs=33.2
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhccC--------------C-----------cEEEEeCCCCcCCCChhh--HH
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEEG--------------C-----------SVIIEHDCGHIIPTRSPY--ID 598 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~--------------~-----------~~vv~~~gGH~ip~~~~~--~~ 598 (608)
++||+.+|. .|-+++.-..+++.+.+.=. . ..+.+.++||++|.+.|. .+
T Consensus 331 irVLiy~Gd---~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~ 407 (415)
T PF00450_consen 331 IRVLIYNGD---LDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQ 407 (415)
T ss_dssp -EEEEEEET---T-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHH
T ss_pred ceeEEeccC---CCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHH
Confidence 778888888 78888888888777766411 0 234456789999986552 24
Q ss_pred HHHHHH
Q 007311 599 EIKSFL 604 (608)
Q Consensus 599 ~i~~Fl 604 (608)
-|.+||
T Consensus 408 m~~~fl 413 (415)
T PF00450_consen 408 MFRRFL 413 (415)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 444444
No 364
>PF02069 Metallothio_Pro: Prokaryotic metallothionein; InterPro: IPR000518 Metallothioneins (MT) are small proteins that bind heavy metals, such as zinc, copper, cadmium and nickel. They have a high content of cysteine residues that bind the metal ions through clusters of thiolate bonds [, , ]. An empirical classification into three classes was proposed by Kojima [], with class III MTs including atypical polypeptides composed of gamma-glutamylcysteinyl units. Class I and class II MTs (the proteinaceous sequences) have now been grouped into families of phylogenetically-related and thus alignable sequences. The MT superfamily is subdivided into families, subfamilies, subgroups, and isolated isoforms and alleles. The metallothionein superfamily comprises all polypeptides that resemble equine renal metallothionein in several respects [], e.g., low molecular weight; high metal content; amino acid composition with high Cys and low aromatic residue content; unique sequence with characteristic distribution of cysteines, and spectroscopic manifestations indicative of metal thiolate clusters. A MT family subsumes MTs that share particular sequence-specific features and are thought to be evolutionarily related. Fifteen MT families have been characterised, each family being identified by its number and its taxonomic range. Family 14 consists of prokaryota MTs. Its members are recognised by the sequence pattern K-C-A-C-x(2)-C-L-C.The taxonomic range of the members extends to cyanobacteria. Known characteristics are: 53 to 56 AAs; 9 conserved Cys; one conserved tyrosine residue; one conserved histidine residue; contain other unusual residues. ; GO: 0046872 metal ion binding; PDB: 1JJD_A.
Probab=25.34 E-value=48 Score=25.30 Aligned_cols=34 Identities=24% Similarity=0.605 Sum_probs=17.6
Q ss_pred CCCCccccceEEeCccccccccccccchhhhcCC
Q 007311 293 RCRCTHCRMLVLVCDTCRMEGAQYVCELCRKHGK 326 (608)
Q Consensus 293 ~c~~~~C~~l~l~C~~C~~~~~~~~c~~c~~~~~ 326 (608)
+|+|+.|.-.|-.=++=+..+..|||+.|.....
T Consensus 7 kCaC~~C~C~V~~~~Ai~~dGk~YCS~aCA~gH~ 40 (52)
T PF02069_consen 7 KCACPSCSCVVSEEEAIQKDGKYYCSEACANGHP 40 (52)
T ss_dssp --SSTT----B-TTTSEESSS-EESSHHHHHTSS
T ss_pred eecCCCCEeEECchHhHHhCCEeeecHHHhccCC
Confidence 6888888765544333334577889999997764
No 365
>PRK12467 peptide synthase; Provisional
Probab=24.74 E-value=2.6e+02 Score=40.14 Aligned_cols=101 Identities=22% Similarity=0.267 Sum_probs=60.5
Q ss_pred cEEEEecCCCCChHHHHHHHHHHHHHccCCcEEEEecCCccCCccccCCCcccccCCCCCCCCCCCccceeeeccCCCCC
Q 007311 373 LRILCLHGFRQNASSFKGRTASLAKKLKNIAEFVFIDAPHELPFIYQTSNVSSVIQNGPPPPSENCKKRFAWFVAPDFSG 452 (608)
Q Consensus 373 ~~iLlLHG~G~na~~f~~~~~~L~~~L~~~~~~v~~daP~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 452 (608)
+.+++.|....+.-.+. .+...++....++.+++++-.. ..|..
T Consensus 3693 ~~l~~~h~~~r~~~~~~----~l~~~l~~~~~~~~l~~~~~~~--------------------------d~~~~------ 3736 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYE----PLAVILEGDRHVLGLTCRHLLD--------------------------DGWQD------ 3736 (3956)
T ss_pred cceeeechhhcchhhhH----HHHHHhCCCCcEEEEecccccc--------------------------ccCCc------
Confidence 45899999988887776 7888887656666666653221 12211
Q ss_pred ccccccccCCCCCCCcccccccccHHHHHHHHHHHHh---HhCCceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEe
Q 007311 453 KRETNWKLADGPFDPHQYQQQTDGLDVSLAYLKTIFS---QEGPFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILC 529 (608)
Q Consensus 453 ~~~~~~~~~~~~~d~~~~~~~~~~l~~s~~~L~~~i~---~~~~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIli 529 (608)
..+.+......+.+. ..++. .+.|||.||.+|..++.+.++. .....++.++
T Consensus 3737 ----------------------~~~~~~~~~y~~~~~~~~~~~p~-~l~g~s~g~~~a~~~~~~l~~~--g~~~~~~~~~ 3791 (3956)
T PRK12467 3737 ----------------------TSLQAMAVQYADYILWQQAKGPY-GLLGWSLGGTLARLVAELLERE--GESEAFLGLF 3791 (3956)
T ss_pred ----------------------cchHHHHHHHHHHHHHhccCCCe-eeeeeecchHHHHHHHHHHHHc--CCceeEEEEE
Confidence 123332222223332 23454 7899999999999999876532 3445555555
Q ss_pred cCCCC
Q 007311 530 SGFAL 534 (608)
Q Consensus 530 sG~~~ 534 (608)
-...|
T Consensus 3792 ~~~~~ 3796 (3956)
T PRK12467 3792 DNTLP 3796 (3956)
T ss_pred ecccc
Confidence 44444
No 366
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=24.71 E-value=75 Score=28.23 Aligned_cols=26 Identities=38% Similarity=0.727 Sum_probs=19.5
Q ss_pred cCCCeEEEEcCCCc-cHH-HHHHHHHhc
Q 007311 204 LQGKHVLMYCTGGI-RCE-MASAYVRSK 229 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~-~a~~~L~~~ 229 (608)
.++++|+++|..|. ||. .+++||..+
T Consensus 71 ~~~~~VlVHC~~G~~RS~~v~~ayLm~~ 98 (133)
T PF00782_consen 71 SEGGKVLVHCKAGLSRSGAVAAAYLMKK 98 (133)
T ss_dssp HTTSEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred cccceeEEEeCCCcccchHHHHHHHHHH
Confidence 57889999999986 655 466667654
No 367
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=24.57 E-value=86 Score=32.95 Aligned_cols=30 Identities=27% Similarity=0.264 Sum_probs=23.1
Q ss_pred HHHHHhHhCCceEEEecChhHHHHHHHHHH
Q 007311 484 LKTIFSQEGPFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 484 L~~~i~~~~~~~~IlGFSQGa~vAl~la~~ 513 (608)
|..+.+...+++.|.|=|+||.+|+.++..
T Consensus 34 L~aLee~gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 34 IKALEEAGIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 434444445889999999999999998864
No 368
>TIGR00311 aIF-2beta translation initiation factor aIF-2, beta subunit, putative.
Probab=24.49 E-value=38 Score=31.13 Aligned_cols=52 Identities=13% Similarity=0.284 Sum_probs=32.8
Q ss_pred eeceeeeeeeeccccCCCCC------CccccccCCCCccccccCCCCCccccceEEeCccccc
Q 007311 255 FFKGKNFVFDHRISVGSSDA------DIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRM 311 (608)
Q Consensus 255 ~~~G~~fVFD~R~~~~~~~~------~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~ 311 (608)
.+.|.-+++-.|.+-...++ ...-.|..|++|-..+.. .=+..+|.|.+|..
T Consensus 69 ~i~~~rlii~G~~~~~~i~~~L~~yI~~yVlC~~C~sPdT~l~k-----~~r~~~l~C~ACGa 126 (133)
T TIGR00311 69 NLEGGRLILQGKFTHFLLNERIEDYVRKYVICRECNRPDTRIIK-----EGRVSLLKCEACGA 126 (133)
T ss_pred eecCCEEEEEeecCHHHHHHHHHHHHhheEECCCCCCCCcEEEE-----eCCeEEEecccCCC
Confidence 33455666666655322111 123579999999988762 12466899999985
No 369
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=24.28 E-value=89 Score=32.46 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~ 514 (608)
+.++++.+..+...... ...+-|||.||++|..+.+++
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 44566666666555443 334789999999999998865
No 370
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=24.28 E-value=89 Score=32.46 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhHhCC-ceEEEecChhHHHHHHHHHHH
Q 007311 477 LDVSLAYLKTIFSQEGP-FDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 477 l~~s~~~L~~~i~~~~~-~~~IlGFSQGa~vAl~la~~~ 514 (608)
+.++++.+..+...... ...+-|||.||++|..+.+++
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 44566666666555443 334789999999999998865
No 371
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=24.27 E-value=18 Score=40.74 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=44.6
Q ss_pred CcEEEecCChhhhhccccCCCCccccCcccccCCCc-hHHHHh--hhhhcCCCeEEEEcCCCccHHHHHHHHHhcCCCCC
Q 007311 158 KLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDL-PTWIDN--NAEQLQGKHVLMYCTGGIRCEMASAYVRSKGAGFE 234 (608)
Q Consensus 158 ~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~-~~~~~~--~~~~~k~k~Iv~yCtgGiR~~~a~~~L~~~~~Gf~ 234 (608)
.+.|+|.|+..|+.-+||.+ .+|.+.. ..|- -+|+.. .....+++++++|=.+-.-+..-...+..+ -+-
T Consensus 634 ~l~v~d~r~~~ef~r~~~s~----s~nip~~-~~ea~l~~~~~l~~~~~~~~~~~v~~~~~~K~~~e~~~~~~~m--k~p 706 (725)
T KOG1093|consen 634 MLYVLDTRQESEFQREHFSD----SINIPFN-NHEADLDWLRFLPGIVCSEGKKCVVVGKNDKHAAERLTELYVM--KVP 706 (725)
T ss_pred HHHHHhHHHHHHHHHhhccc----cccCCcc-chHHHHHHhhcchHhHHhhCCeEEEeccchHHHHHHhhHHHHh--ccc
Confidence 57899999999999999998 4444321 1110 011111 112346778877755544333333333332 244
Q ss_pred cEEEcCccHHHH
Q 007311 235 NVFQLYGGIQRY 246 (608)
Q Consensus 235 nV~~L~GGi~~w 246 (608)
..-.|++|+.+|
T Consensus 707 ~~cil~~~~~~~ 718 (725)
T KOG1093|consen 707 RICILHDGFNNI 718 (725)
T ss_pred HHHHHHHHHhhc
Confidence 445566666644
No 372
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=24.13 E-value=92 Score=29.73 Aligned_cols=23 Identities=26% Similarity=0.108 Sum_probs=19.5
Q ss_pred hCCceEEEecChhHHHHHHHHHH
Q 007311 491 EGPFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 491 ~~~~~~IlGFSQGa~vAl~la~~ 513 (608)
...++.|.|=|.||.+|+.++..
T Consensus 25 ~~~~d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 25 GILKKRVAGTSAGAITAALLALG 47 (194)
T ss_pred CCCcceEEEECHHHHHHHHHHcC
Confidence 34668999999999999998874
No 373
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.82 E-value=1.5e+02 Score=33.42 Aligned_cols=57 Identities=19% Similarity=0.159 Sum_probs=35.9
Q ss_pred HHHHHHHhH--hC-CceEEEecChhHHHHHHHHHHHhhhhCCCCccEEEEecCCCCCccc
Q 007311 482 AYLKTIFSQ--EG-PFDGILGFSQGAAMAASVCAQWERLKGEIDFRFAILCSGFALHSAE 538 (608)
Q Consensus 482 ~~L~~~i~~--~~-~~~~IlGFSQGa~vAl~la~~~~~~~~~~~l~~vIlisG~~~~~~~ 538 (608)
+.|.+.+.. +| ..+.++|||.||.+.+.-.....+...-.-+.-+|+++...+...+
T Consensus 433 ~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~ 492 (633)
T KOG2385|consen 433 ELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAK 492 (633)
T ss_pred HHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHH
Confidence 345555443 23 2347999999999999776655432222335667888877776653
No 374
>smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5.
Probab=23.46 E-value=49 Score=29.33 Aligned_cols=56 Identities=18% Similarity=0.371 Sum_probs=33.8
Q ss_pred CCCCeece-eeeeeeeccccCCCCC------CccccccCCCCccccccCCCCCccccceEEeCccccc
Q 007311 251 PDGGFFKG-KNFVFDHRISVGSSDA------DIMGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRM 311 (608)
Q Consensus 251 ~~~~~~~G-~~fVFD~R~~~~~~~~------~~~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~ 311 (608)
+-.+.++| .-+|+-.|.+-...++ +..-.|..|++|-..+... =+..+|.|.+|..
T Consensus 47 gt~g~id~~~rlii~G~~~~~~i~~~l~~yI~~yVlC~~C~spdT~l~k~-----~r~~~l~C~aCGa 109 (110)
T smart00653 47 GTQGSIDGKGRLIVNGRFTPKKLQDLLRRYIKEYVLCPECGSPDTELIKE-----NRLFFLKCEACGA 109 (110)
T ss_pred CCceeECCCCeEEEEEeeCHHHHHHHHHHHHHhcEECCCCCCCCcEEEEe-----CCeEEEEccccCC
Confidence 33344455 4556666555221111 1135799999998777521 2577999999974
No 375
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=23.18 E-value=22 Score=37.59 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=40.7
Q ss_pred CHHHHHHHHHccCCCccccccCCCCCcEEEecCChhhhhccccCCCCccccCcccccCCCchHHHHhhhhhcCCCeEEEE
Q 007311 133 SAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMY 212 (608)
Q Consensus 133 sp~e~~~~l~~~~~~~~~~~~~~~~~~vllDvRn~~E~~~Gh~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~k~k~Iv~y 212 (608)
+|+++.+.+.+ ...++|+|..-.+..+||+| +++.+...+..+-.|+.. ....++|++.
T Consensus 17 ~~~~~~~~l~~--------------~~~~~d~rg~i~~a~egIng----tis~~~~~~~~~~~~l~~---~~~~~~i~l~ 75 (314)
T PRK00142 17 DPEAFRDEHLA--------------LCKSLGLKGRILVAEEGING----TVSGTIEQTEAYMAWLKA---DPRFADIRFK 75 (314)
T ss_pred CHHHHHHHHHH--------------HHHHcCCeeEEEEcCCCceE----EEEecHHHHHHHHHHHhh---CcCCCCceEE
Confidence 57889888875 36789999999999999998 676664444444445433 2234555554
No 376
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=23.15 E-value=1.1e+02 Score=28.92 Aligned_cols=30 Identities=30% Similarity=0.274 Sum_probs=22.7
Q ss_pred HHHHHhHhCCceEEEecChhHHHHHHHHHH
Q 007311 484 LKTIFSQEGPFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 484 L~~~i~~~~~~~~IlGFSQGa~vAl~la~~ 513 (608)
|+.+.+....++.|.|=|.||.+|+.++..
T Consensus 17 l~aL~e~gi~~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 17 AKALRERGPLIDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 333334344688999999999999998874
No 377
>PF10497 zf-4CXXC_R1: Zinc-finger domain of monoamine-oxidase A repressor R1; InterPro: IPR018866 R1 is a transcription factor repressor that inhibits monoamine oxidase A gene expression. This domain is a four-CXXC zinc finger putative DNA-binding domain found at the C-terminal end of R1. The domain carries 12 cysteines of which four pairs are of the CXXC type [].
Probab=22.98 E-value=64 Score=28.31 Aligned_cols=32 Identities=25% Similarity=0.664 Sum_probs=20.3
Q ss_pred ccccCCCCccccccCCC----CCccccc-eEEeCccc
Q 007311 278 GSCLLCSSSFDDYSSRC----RCTHCRM-LVLVCDTC 309 (608)
Q Consensus 278 ~~C~~C~~~~~~~~~~c----~~~~C~~-l~l~C~~C 309 (608)
..||+|.....++...| .+..|+. ...-|..|
T Consensus 8 ~~CHqCrqKt~~~~~~C~~~~~~~~C~~~~~~fC~~C 44 (105)
T PF10497_consen 8 KTCHQCRQKTLDFKTICTGHWKNSSCRGCRGKFCGGC 44 (105)
T ss_pred CCchhhcCCCCCCceEcCCCCCCCCCccCcceehHhH
Confidence 36999998877665567 6677711 12345555
No 378
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=22.84 E-value=47 Score=34.05 Aligned_cols=46 Identities=17% Similarity=0.447 Sum_probs=31.1
Q ss_pred cccccCCCC-ccccccCCCCCccccceEEeCccccccccc----cccchhhhcCCCC
Q 007311 277 MGSCLLCSS-SFDDYSSRCRCTHCRMLVLVCDTCRMEGAQ----YVCELCRKHGKSI 328 (608)
Q Consensus 277 ~~~C~~C~~-~~~~~~~~c~~~~C~~l~l~C~~C~~~~~~----~~c~~c~~~~~~~ 328 (608)
-..|..||. |+-.|...| |. .+-|--|..+... .+|+.|-++.+..
T Consensus 239 ~~~C~~Cg~~PtiP~~~~~-C~-----HiyCY~Ci~ts~~~~asf~Cp~Cg~~~~~l 289 (298)
T KOG2879|consen 239 DTECPVCGEPPTIPHVIGK-CG-----HIYCYYCIATSRLWDASFTCPLCGENVEPL 289 (298)
T ss_pred CceeeccCCCCCCCeeecc-cc-----ceeehhhhhhhhcchhhcccCccCCCCcch
Confidence 447999997 455565432 22 2788888765433 6899999988754
No 379
>TIGR02691 arsC_pI258_fam arsenate reductase (thioredoxin). This family describes the well-studied thioredoxin-dependent arsenate reductase of Staphylococcus aureaus plasmid pI258 and other mechanistically similar arsenate reductases. The mechanism involves an intramolecular disulfide bond cascade, and aligned members of this family have four absolutely conserved Cys residues. This group of arsenate reductases belongs to the low-molecular weight protein-tyrosine phosphatase family (pfam01451), as does a group of glutathione/glutaredoxin type arsenate reductases (TIGR02689). At least two other, non-homologous groups of arsenate reductases involved in arsenical resistance are also known. This enzyme reduces arsenate to arsenite, which may be more toxic but which is more easily exported.
Probab=22.60 E-value=86 Score=28.37 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=24.7
Q ss_pred EEEEcCCCc-cHHHHHHHHHhcCCCCCcEEEcCccHH
Q 007311 209 VLMYCTGGI-RCEMASAYVRSKGAGFENVFQLYGGIQ 244 (608)
Q Consensus 209 Iv~yCtgGi-R~~~a~~~L~~~~~Gf~nV~~L~GGi~ 244 (608)
|++.|++.+ ||-+|.++|+.. .| .++.....|+.
T Consensus 1 iLFvC~~N~~RS~mAea~~~~~-~~-~~~~v~SaG~~ 35 (129)
T TIGR02691 1 IYFLCTGNSCRSQMAEGWGKKY-LG-DEWEVYSAGIE 35 (129)
T ss_pred CEEEcCCchHHHHHHHHHHHHh-cC-CCEEEEcCCCC
Confidence 689999874 899999999885 23 35555666663
No 380
>PRK07116 flavodoxin; Provisional
Probab=22.60 E-value=1.7e+02 Score=27.31 Aligned_cols=47 Identities=21% Similarity=0.371 Sum_probs=28.7
Q ss_pred cCCCeEEEEcCCCcc-HHHHHHHHHhc--CCCCCcEEEcCc-----cHHHHHHhC
Q 007311 204 LQGKHVLMYCTGGIR-CEMASAYVRSK--GAGFENVFQLYG-----GIQRYLEQF 250 (608)
Q Consensus 204 ~k~k~Iv~yCtgGiR-~~~a~~~L~~~--~~Gf~nV~~L~G-----Gi~~w~~~~ 250 (608)
..+|+++++||.|.+ ...+...|++. +.++...+.+.| .|..|++++
T Consensus 104 l~~k~v~~f~T~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~wl~~~ 158 (160)
T PRK07116 104 FSGKTVIPFATSGGSGIGNAEKELKKSYPDANWKEGRLLNGGASKEEIKEWINKL 158 (160)
T ss_pred CCCCEEEEEEeCCCCCcCcHHHHHHHHCCcCccccCeeecCCCcHHHHHHHHHHc
Confidence 568999999986554 34555555553 013444454443 588898875
No 381
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=22.28 E-value=52 Score=38.09 Aligned_cols=47 Identities=21% Similarity=0.642 Sum_probs=31.2
Q ss_pred cccccCCCCccccccCCCCCccccceEEeCcccccc---ccccccchhhhcC
Q 007311 277 MGSCLLCSSSFDDYSSRCRCTHCRMLVLVCDTCRME---GAQYVCELCRKHG 325 (608)
Q Consensus 277 ~~~C~~C~~~~~~~~~~c~~~~C~~l~l~C~~C~~~---~~~~~c~~c~~~~ 325 (608)
--.|+.||.|.|.|.. .|+.|+..|-+|-+-... .....|+.|+-..
T Consensus 1117 ~vdc~~cg~~i~~~~~--~c~ec~~kfP~CiasG~pIt~~~fWlC~~CkH~a 1166 (1189)
T KOG2041|consen 1117 KVDCSVCGAKIDPYDL--QCSECQTKFPVCIASGRPITDNIFWLCPRCKHRA 1166 (1189)
T ss_pred ceeeeecCCcCCccCC--CChhhcCcCceeeccCCccccceEEEcccccccc
Confidence 3479999999999974 458888777766554321 2345566665433
No 382
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=22.16 E-value=84 Score=31.86 Aligned_cols=28 Identities=25% Similarity=0.460 Sum_probs=20.6
Q ss_pred cCCCeEEEEcCCCc-cHH-HHHHHHHhcCCCC
Q 007311 204 LQGKHVLMYCTGGI-RCE-MASAYVRSKGAGF 233 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~-~a~~~L~~~~~Gf 233 (608)
..+++|++.|.+|. |+- .++.||.+. |+
T Consensus 168 ~~g~~VaVHC~AGlGRTGtl~AayLI~~--Gm 197 (241)
T PTZ00393 168 KNNRAVAVHCVAGLGRAPVLASIVLIEF--GM 197 (241)
T ss_pred hcCCeEEEECCCCCCHHHHHHHHHHHHc--CC
Confidence 36789999999885 654 566777776 65
No 383
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=21.79 E-value=1.3e+02 Score=28.49 Aligned_cols=23 Identities=35% Similarity=0.195 Sum_probs=19.8
Q ss_pred hCCceEEEecChhHHHHHHHHHH
Q 007311 491 EGPFDGILGFSQGAAMAASVCAQ 513 (608)
Q Consensus 491 ~~~~~~IlGFSQGa~vAl~la~~ 513 (608)
..+++.|.|-|.||.+|+.++..
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAG 48 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcC
Confidence 34788999999999999988874
No 384
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=21.75 E-value=1.8e+02 Score=32.34 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=39.2
Q ss_pred CCEEEEEcCCCCCCcccchHHHHHHHHHhccC-------------C----------cE-EEEeCCCCcCCCChhh--HHH
Q 007311 546 CPSLHIFGGDLGNDRQVANQASKELAKAFEEG-------------C----------SV-IIEHDCGHIIPTRSPY--IDE 599 (608)
Q Consensus 546 ~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~-------------~----------~~-vv~~~gGH~ip~~~~~--~~~ 599 (608)
+++|+..|+ .|.+||.-..+.+.+.+.-. . .. +.+.++||++|.+++. ..-
T Consensus 364 ~rvliysGD---~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m 440 (454)
T KOG1282|consen 364 YRVLIYSGD---HDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIM 440 (454)
T ss_pred eEEEEEeCC---cceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHH
Confidence 789999999 89999988888765444310 0 11 3445779999998763 356
Q ss_pred HHHHHH
Q 007311 600 IKSFLQ 605 (608)
Q Consensus 600 i~~Fl~ 605 (608)
+.+||.
T Consensus 441 ~~~fl~ 446 (454)
T KOG1282|consen 441 FQRFLN 446 (454)
T ss_pred HHHHHc
Confidence 667765
No 385
>PF06200 tify: tify domain; InterPro: IPR010399 The tify domain is a 36-amino acid domain only found among Embryophyta (land plants). It has been named after the most conserved amino acid pattern (TIF[F/Y]XG) it contains, but was previously known as the Zim domain. As the use of uppercase characters (TIFY) might imply that the domain is fully conserved across proteins, a lowercase lettering has been chosen in an attempt to highlight the reality of its natural variability. Based on the domain architecture, tify domain containing proteins can be classified into two groups. Group I is formed by proteins possessing a CCT (CONSTANS, CO-like, and TOC1) domain and a GATA-type zinc finger in addition to the tify domain. Group II contains proteins characterised by the tify domain but lacking a GATA-type zinc finger. Tify domain containing proteins might be involved in developmental processes and some of them have features that are characteristic for transcription factors: a nuclear localisation and the presence of a putative DNA-binding domain []. Some proteins known to contain a tify domain include: Arabidopsis thaliana Zinc-finger protein expressed in Inflorescence Meristem (ZIM), a putative transcription factor involved in inflorescence and flower development [, ]. A. thaliana ZIM-like proteins (ZML) []. A. thaliana PEAPOD1 and PEAPOD2 (PPD1 and PPD2) [].
Probab=21.55 E-value=48 Score=23.28 Aligned_cols=11 Identities=45% Similarity=0.957 Sum_probs=10.0
Q ss_pred eeceeeeeeee
Q 007311 255 FFKGKNFVFDH 265 (608)
Q Consensus 255 ~~~G~~fVFD~ 265 (608)
+|.|+.+|||+
T Consensus 11 fY~G~V~Vfd~ 21 (36)
T PF06200_consen 11 FYGGQVCVFDD 21 (36)
T ss_pred EECCEEEEeCC
Confidence 69999999995
No 386
>PF14446 Prok-RING_1: Prokaryotic RING finger family 1
Probab=21.34 E-value=51 Score=25.38 Aligned_cols=12 Identities=25% Similarity=0.653 Sum_probs=8.7
Q ss_pred EEeCcccccccc
Q 007311 303 VLVCDTCRMEGA 314 (608)
Q Consensus 303 ~l~C~~C~~~~~ 314 (608)
+++|+.|.+..+
T Consensus 21 iVvCp~CgapyH 32 (54)
T PF14446_consen 21 IVVCPECGAPYH 32 (54)
T ss_pred EEECCCCCCccc
Confidence 578888887544
No 387
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.29 E-value=1.1e+02 Score=30.02 Aligned_cols=29 Identities=24% Similarity=0.037 Sum_probs=22.3
Q ss_pred HHHhHhCCceEEEecChhHHHHHHHHHHH
Q 007311 486 TIFSQEGPFDGILGFSQGAAMAASVCAQW 514 (608)
Q Consensus 486 ~~i~~~~~~~~IlGFSQGa~vAl~la~~~ 514 (608)
.+.+...+++.|.|-|.||.+|+.++...
T Consensus 19 aL~e~g~~~d~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 19 ALAEAGIEPDIISGTSIGAINGALIAGGD 47 (215)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 33333347889999999999999998744
No 388
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=20.98 E-value=2e+02 Score=23.52 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCCCCCcccchHHHHHHHHHhccCCcEEEEeCC-CCcCCCC--------hhhHHHHHHHH
Q 007311 545 NCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDC-GHIIPTR--------SPYIDEIKSFL 604 (608)
Q Consensus 545 ~~PvL~i~G~~~~~D~~Vp~~~~~~l~~~~~~~~~~vv~~~g-GH~ip~~--------~~~~~~i~~Fl 604 (608)
+--++++||- .+. ...-..+++.|......++.++- ||.-... ..+++++.+|+
T Consensus 16 k~~v~i~HG~---~eh---~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 16 KAVVVIVHGF---GEH---SGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CEEEEEeCCc---HHH---HHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 4447788887 442 23455677777766688888874 7764331 23555555554
No 389
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=20.82 E-value=84 Score=30.06 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=17.0
Q ss_pred cCCCeEEEEcCCCc-cHHH-HHHHHHhc
Q 007311 204 LQGKHVLMYCTGGI-RCEM-ASAYVRSK 229 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~-a~~~L~~~ 229 (608)
..+++|+++|.||. |+-. |+.+|.+.
T Consensus 131 ~~g~~V~vHC~GGlGRtGlvAAcLLl~L 158 (168)
T PF05706_consen 131 ENGRKVLVHCRGGLGRTGLVAACLLLEL 158 (168)
T ss_dssp HTT--EEEE-SSSSSHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 47899999999984 6554 66677665
No 390
>PRK12865 YciI-like protein; Reviewed
Probab=20.81 E-value=2e+02 Score=24.57 Aligned_cols=53 Identities=11% Similarity=0.003 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhHhcCCeeEEEEccCCccee---eec----chHhHHHHHHHHHhCCCCC
Q 007311 25 LNSLFTFYESNCSQLGLLGRVRLAPHGVNVT---VGG----KLSSLESHIDAVKSISLFE 77 (608)
Q Consensus 25 ~~~~~~~~~~~~~~~~l~Gri~ia~eGiN~t---~~g----~~~~~~~~~~~~~~~~~f~ 77 (608)
..++|..|.+..+.+.-.|+|+.+---.+.+ .|| ..++.++-.+.+++||...
T Consensus 17 R~~~r~~H~~~l~~~~~~G~l~~~Gp~~~~~g~~~G~~~i~~a~s~e~a~~~~~~DP~~~ 76 (97)
T PRK12865 17 RMDTRPTHLEYLNKLNAEGTLKIAGPFLDDDGKPCGSLVIVKAETKEAAKALADADPYAK 76 (97)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEecCCcCCCCCceeEEEEEEcCCHHHHHHHHHcCCchh
Confidence 3567778888888888889988765555531 222 3456666677888888554
No 391
>PRK09590 celB cellobiose phosphotransferase system IIB component; Reviewed
Probab=20.64 E-value=1e+02 Score=26.98 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=24.0
Q ss_pred CeEEEEcCCCccHHHHHHHHHhc--CCCCCcEEEcCccHHHH
Q 007311 207 KHVLMYCTGGIRCEMASAYVRSK--GAGFENVFQLYGGIQRY 246 (608)
Q Consensus 207 k~Iv~yCtgGiR~~~a~~~L~~~--~~Gf~nV~~L~GGi~~w 246 (608)
|+|++.|.+|+-+..++..+++. ..|+ ++..-..++...
T Consensus 2 kkILlvCg~G~STSlla~k~k~~~~e~gi-~~~i~a~~~~e~ 42 (104)
T PRK09590 2 KKALIICAAGMSSSMMAKKTTEYLKEQGK-DIEVDAITATEG 42 (104)
T ss_pred cEEEEECCCchHHHHHHHHHHHHHHHCCC-ceEEEEecHHHH
Confidence 57999999999877666655441 1365 343334445443
No 392
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=20.56 E-value=96 Score=29.44 Aligned_cols=26 Identities=12% Similarity=0.301 Sum_probs=19.5
Q ss_pred cCCCeEEEEcCCCc-cHHH-HHHHHHhc
Q 007311 204 LQGKHVLMYCTGGI-RCEM-ASAYVRSK 229 (608)
Q Consensus 204 ~k~k~Iv~yCtgGi-R~~~-a~~~L~~~ 229 (608)
.++.+|++.|..|+ |+.. ++.||.+.
T Consensus 96 ~~g~~V~VHC~aGigRSgt~~a~yL~~~ 123 (166)
T PTZ00242 96 TPPETIAVHCVAGLGRAPILVALALVEY 123 (166)
T ss_pred cCCCeEEEECCCCCCHHHHHHHHHHHHh
Confidence 45889999999885 7765 46677664
No 393
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.51 E-value=6.3e+02 Score=25.38 Aligned_cols=37 Identities=8% Similarity=0.091 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhHh--CCceEEEecChhHHHHHHHHHHHh
Q 007311 479 VSLAYLKTIFSQE--GPFDGILGFSQGAAMAASVCAQWE 515 (608)
Q Consensus 479 ~s~~~L~~~i~~~--~~~~~IlGFSQGa~vAl~la~~~~ 515 (608)
+...++...+... ..-..|+.||-||...+.+..+++
T Consensus 174 eh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~ 212 (297)
T KOG3967|consen 174 EHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFP 212 (297)
T ss_pred HHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcC
Confidence 3444444443322 233458999999999999998775
No 394
>PF03283 PAE: Pectinacetylesterase
Probab=20.48 E-value=2.1e+02 Score=30.92 Aligned_cols=57 Identities=19% Similarity=0.079 Sum_probs=29.8
Q ss_pred HHHHHHHHHHH-HhHhCCceEEEecChhHHHHHHHHHHHhhhhC-CCCccEEEEecCCCCC
Q 007311 477 LDVSLAYLKTI-FSQEGPFDGILGFSQGAAMAASVCAQWERLKG-EIDFRFAILCSGFALH 535 (608)
Q Consensus 477 l~~s~~~L~~~-i~~~~~~~~IlGFSQGa~vAl~la~~~~~~~~-~~~l~~vIlisG~~~~ 535 (608)
+++.+++|... +.. ...+.|.|-|-||.-++..+-...+.-. ...+ .++.-||+...
T Consensus 140 ~~avl~~l~~~gl~~-a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v-~~~~DsG~f~d 198 (361)
T PF03283_consen 140 LRAVLDDLLSNGLPN-AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKV-KCLSDSGFFLD 198 (361)
T ss_pred HHHHHHHHHHhcCcc-cceEEEeccChHHHHHHHHHHHHHHHhccCceE-EEecccccccc
Confidence 44444444443 221 2344688999999988876654432111 1222 23445666643
No 395
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=20.38 E-value=61 Score=37.76 Aligned_cols=46 Identities=20% Similarity=0.446 Sum_probs=30.0
Q ss_pred cccCCCCccccccCCCCCccccceE--EeCcccccc--ccccccchhhhcCC
Q 007311 279 SCLLCSSSFDDYSSRCRCTHCRMLV--LVCDTCRME--GAQYVCELCRKHGK 326 (608)
Q Consensus 279 ~C~~C~~~~~~~~~~c~~~~C~~l~--l~C~~C~~~--~~~~~c~~c~~~~~ 326 (608)
.|.+||..... +..-|+.|...+ -.|+.|... .....|..|-..-.
T Consensus 3 ~Cp~Cg~~n~~--~akFC~~CG~~l~~~~Cp~CG~~~~~~~~fC~~CG~~~~ 52 (645)
T PRK14559 3 ICPQCQFENPN--NNRFCQKCGTSLTHKPCPQCGTEVPVDEAHCPNCGAETG 52 (645)
T ss_pred cCCCCCCcCCC--CCccccccCCCCCCCcCCCCCCCCCcccccccccCCccc
Confidence 68888877644 234567777664 368888753 34556888876644
No 396
>PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A. The small G protein Rab3A plays an important role in the regulation of neurotransmitter release. The crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A shows that the effector domain of rabphilin-3A contacts Rab3A in two distinct areas. The first interface involves the Rab3A switch I and switch II regions, which are sensitive to the nucleotide-binding state of Rab3A. The second interface consists of a deep pocket in Rab3A that interacts with a SGAWFF structural element of rabphilin-3A. Sequence and structure analysis, and biochemical data suggest that this pocket, or Rab complementarity-determining region (RabCDR), establishes a specific interaction between each Rab protein and its effectors. It has been suggested that RabCDRs could be major determinants of effector specificity during vesicle trafficking and fusion [].; GO: 0008270 zinc ion binding, 0017137 Rab GTPase binding, 0006886 intracellular protein transport; PDB: 2CSZ_A 2ZET_C 1ZBD_B 3BC1_B 2CJS_C 2A20_A.
Probab=20.11 E-value=61 Score=28.90 Aligned_cols=47 Identities=23% Similarity=0.672 Sum_probs=31.2
Q ss_pred cccccCCCCccccccC-CCCCccccceEEeCcccccc---ccccccchhhhcC
Q 007311 277 MGSCLLCSSSFDDYSS-RCRCTHCRMLVLVCDTCRME---GAQYVCELCRKHG 325 (608)
Q Consensus 277 ~~~C~~C~~~~~~~~~-~c~~~~C~~l~l~C~~C~~~---~~~~~c~~c~~~~ 325 (608)
...|..|+.|+.-..+ +-.|.+|.. -+|..|... ...+.|..|.+..
T Consensus 54 ~~~C~~C~~~fg~l~~~~~~C~~C~~--~VC~~C~~~~~~~~~WlC~vC~k~r 104 (118)
T PF02318_consen 54 ERHCARCGKPFGFLFNRGRVCVDCKH--RVCKKCGVYSKKEPIWLCKVCQKQR 104 (118)
T ss_dssp CSB-TTTS-BCSCTSTTCEEETTTTE--EEETTSEEETSSSCCEEEHHHHHHH
T ss_pred CcchhhhCCcccccCCCCCcCCcCCc--cccCccCCcCCCCCCEEChhhHHHH
Confidence 4589999999865432 344677774 468899753 4577899998754
No 397
>PRK10279 hypothetical protein; Provisional
Probab=20.01 E-value=1.3e+02 Score=31.67 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=22.0
Q ss_pred HHHHHhHhCCceEEEecChhHHHHHHHHH
Q 007311 484 LKTIFSQEGPFDGILGFSQGAAMAASVCA 512 (608)
Q Consensus 484 L~~~i~~~~~~~~IlGFSQGa~vAl~la~ 512 (608)
|+.+.+...+++.|.|=|+||.++..+|.
T Consensus 24 L~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 24 INALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 33333334478899999999999999885
Done!