Query 007313
Match_columns 608
No_of_seqs 156 out of 1473
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 21:52:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007313.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007313hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03167 Chaperonin-60 beta su 100.0 2E-121 5E-126 1028.2 60.9 600 1-608 1-600 (600)
2 PRK12852 groEL chaperonin GroE 100.0 7E-114 2E-118 963.9 62.0 528 63-594 3-531 (545)
3 PRK00013 groEL chaperonin GroE 100.0 1E-113 2E-118 960.2 61.4 530 63-596 2-532 (542)
4 PRK12849 groEL chaperonin GroE 100.0 2E-113 3E-118 958.6 61.9 538 63-605 2-540 (542)
5 PRK12850 groEL chaperonin GroE 100.0 1E-113 3E-118 960.1 61.2 538 63-606 3-544 (544)
6 PRK14104 chaperonin GroEL; Pro 100.0 2E-112 5E-117 949.9 61.4 540 62-605 2-542 (546)
7 PRK12851 groEL chaperonin GroE 100.0 2E-111 4E-116 942.3 61.2 527 63-594 3-530 (541)
8 PTZ00114 Heat shock protein 60 100.0 2E-110 4E-115 937.6 60.0 526 63-591 14-543 (555)
9 CHL00093 groEL chaperonin GroE 100.0 2E-110 4E-115 933.6 58.8 523 63-590 2-527 (529)
10 TIGR02348 GroEL chaperonin Gro 100.0 5E-110 1E-114 929.3 59.8 521 64-589 2-523 (524)
11 KOG0356 Mitochondrial chaperon 100.0 7E-111 2E-115 890.3 42.5 527 58-592 13-541 (550)
12 cd03344 GroEL GroEL_like type 100.0 6E-109 1E-113 918.7 58.9 518 64-586 1-519 (520)
13 COG0459 GroL Chaperonin GroEL 100.0 3.3E-93 7.1E-98 786.7 35.6 499 63-592 3-518 (524)
14 cd03343 cpn60 cpn60 chaperonin 100.0 4.3E-91 9.2E-96 778.9 50.9 457 65-587 9-516 (517)
15 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 1E-91 2.2E-96 776.5 45.3 448 72-588 11-483 (484)
16 cd03335 TCP1_alpha TCP-1 (CTT 100.0 4.6E-91 9.9E-96 779.4 49.6 459 72-589 7-527 (527)
17 TIGR02347 chap_CCT_zeta T-comp 100.0 9.2E-91 2E-95 775.4 51.4 456 72-591 15-529 (531)
18 TIGR02339 thermosome_arch ther 100.0 8.8E-91 1.9E-95 776.1 50.5 455 66-586 11-518 (519)
19 TIGR02340 chap_CCT_alpha T-com 100.0 1.8E-90 3.9E-95 775.7 50.2 460 72-590 11-532 (536)
20 cd03338 TCP1_delta TCP-1 (CTT 100.0 5.2E-90 1.1E-94 769.5 48.6 458 72-586 7-514 (515)
21 cd03339 TCP1_epsilon TCP-1 (CT 100.0 7.4E-90 1.6E-94 769.5 49.7 456 65-586 17-526 (526)
22 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.6E-89 3.4E-94 766.5 50.8 456 72-588 15-520 (522)
23 TIGR02344 chap_CCT_gamma T-com 100.0 4.1E-89 8.9E-94 763.7 49.9 455 72-590 15-524 (525)
24 TIGR02345 chap_CCT_eta T-compl 100.0 5.9E-89 1.3E-93 761.3 50.4 454 72-588 17-520 (522)
25 TIGR02342 chap_CCT_delta T-com 100.0 4.5E-89 9.8E-94 761.4 48.5 459 72-587 8-516 (517)
26 PTZ00212 T-complex protein 1 s 100.0 1.4E-88 3E-93 759.6 52.1 456 72-592 21-530 (533)
27 cd03336 TCP1_beta TCP-1 (CTT o 100.0 2.2E-88 4.7E-93 755.9 52.9 454 72-590 12-516 (517)
28 TIGR02343 chap_CCT_epsi T-comp 100.0 1E-88 2.2E-93 760.2 49.9 451 72-586 26-530 (532)
29 TIGR02346 chap_CCT_theta T-com 100.0 3.9E-89 8.4E-94 763.4 45.8 460 72-596 17-528 (531)
30 cd03337 TCP1_gamma TCP-1 (CTT 100.0 1E-87 2.2E-92 744.3 45.7 434 72-586 15-479 (480)
31 TIGR02341 chap_CCT_beta T-comp 100.0 1E-86 2.2E-91 742.0 52.4 454 72-590 13-517 (519)
32 cd03341 TCP1_theta TCP-1 (CTT 100.0 5.6E-87 1.2E-91 736.9 45.9 438 71-587 6-471 (472)
33 cd00309 chaperonin_type_I_II c 100.0 3.9E-86 8.5E-91 730.1 49.5 439 65-586 2-464 (464)
34 KOG0361 Chaperonin complex com 100.0 8.4E-86 1.8E-90 669.3 34.4 462 72-594 19-529 (543)
35 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 3.5E-80 7.7E-85 685.4 43.3 440 85-589 1-485 (485)
36 KOG0363 Chaperonin complex com 100.0 1.3E-78 2.8E-83 613.3 34.0 458 72-594 17-525 (527)
37 KOG0358 Chaperonin complex com 100.0 1.4E-77 3E-82 608.4 29.2 458 72-587 25-533 (534)
38 KOG0362 Chaperonin complex com 100.0 6.5E-70 1.4E-74 569.7 40.0 462 70-596 23-529 (537)
39 KOG0360 Chaperonin complex com 100.0 1.9E-69 4.1E-74 562.7 27.4 463 72-594 18-542 (545)
40 KOG0364 Chaperonin complex com 100.0 1.4E-67 3.1E-72 544.0 24.2 451 77-591 23-524 (527)
41 KOG0359 Chaperonin complex com 100.0 4.5E-61 9.7E-66 495.3 23.7 450 74-587 18-514 (520)
42 KOG0357 Chaperonin complex com 100.0 1.1E-59 2.3E-64 472.6 20.5 373 58-589 15-397 (400)
43 cd03333 chaperonin_like chaper 100.0 2.9E-27 6.2E-32 234.7 21.1 191 204-470 3-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 3.1E-25 6.8E-30 227.3 21.3 198 215-471 19-254 (261)
45 KOG0230 Phosphatidylinositol-4 99.0 2.1E-09 4.5E-14 127.1 14.9 206 215-479 333-576 (1598)
46 COG0459 GroL Chaperonin GroEL 97.0 0.0011 2.4E-08 74.7 6.9 89 294-398 259-354 (524)
47 smart00574 POX domain associat 62.0 48 0.001 31.0 8.2 60 420-492 69-129 (140)
48 TIGR02345 chap_CCT_eta T-compl 51.3 4.8 0.00011 45.7 -0.1 60 305-365 247-315 (522)
49 PF07526 POX: Associated with 49.9 79 0.0017 29.6 7.7 58 422-492 71-129 (140)
50 COG1433 Uncharacterized conser 36.2 1.3E+02 0.0028 27.5 6.7 42 296-345 56-97 (121)
51 PF07818 HCNGP: HCNGP-like pro 32.0 63 0.0014 28.3 3.8 57 513-577 30-86 (96)
52 PRK13600 putative ribosomal pr 24.5 3.4E+02 0.0073 23.2 6.9 54 297-360 21-74 (84)
No 1
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=2.4e-121 Score=1028.15 Aligned_cols=600 Identities=91% Similarity=1.258 Sum_probs=567.6
Q ss_pred CcccccccccccccccCCCcccchhccccccccccccccccccccccccccccccCccccccccccccCCcHHHHHHHHH
Q 007313 1 MASTFTAMSSISSMIAPNGRMTDKKLASSSNKLSSLASISSSSFGRRQSVALRRARTPKIYAAKDLHFNKDGYAMKKLQN 80 (608)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~f~~~~~~r~~~~~ 80 (608)
|||++.+.++.++..++... ++.+.++|...++..+|+++++.+.+++..++...+|+|.||.+.++|+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ar~~l~~ 73 (600)
T PLN03167 1 MASTFTATSSVGSLAAPNGH-------KSDNRLSSFASISSSSFGRRQSVRLRRSRSPKVKAAKELHFNKDGSAIKKLQA 73 (600)
T ss_pred CcchhhhhhhhcCccccccc-------ccccccccccccccccccccccccccccCCchhhhcceeecCCcHHHHHHHHH
Confidence 88998888888888877544 55577888888899999766666555665565555999999932289999999
Q ss_pred HHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCchhHHHHHHH
Q 007313 81 GVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 160 (608)
Q Consensus 81 gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGTTt~vvLa~~ 160 (608)
|++.|+++|++||||+||||||++++|+|+|||||+||+|+|+++||++|+||+||+++|++||+++||||||++||+++
T Consensus 74 g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~ 153 (600)
T PLN03167 74 GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG 153 (600)
T ss_pred HHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchHHHHHHHhhcCChhHHHHHHHHHHHhhccCCcEEEec
Q 007313 161 LIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 240 (608)
Q Consensus 161 Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~~ls~Li~eAi~~vg~~g~I~v~~ 240 (608)
||+++.+++++|+||..|++||++|.+.+++.|+++++|+++.+|.+||++|+++++.|++|+++|+.+++++|.|.+++
T Consensus 154 LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d~~L~~vA~tS~~~~~~i~~liaeAv~~Vg~~g~i~v~~ 233 (600)
T PLN03167 154 LIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE 233 (600)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHhccCcHHHHHHHHHHHHHhccCCcEEecc
Confidence 99999999999999999999999999999999999999997558999999999999999999999999999999999999
Q ss_pred CCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHHHcCCCEEEEcccchHHHH
Q 007313 241 GKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEAL 320 (608)
Q Consensus 241 G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al 320 (608)
|++++|++++++|+.|+++|.+|||++++++|+++++||+|+++|++|++++++.++++.+.+.|+|+||++++|++++|
T Consensus 234 g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~~le~i~~~g~~lvI~a~~I~~~aL 313 (600)
T PLN03167 234 GKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIGILEDAIRGGYPLLIIAEDIEQEAL 313 (600)
T ss_pred CCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHHHHHHHHHhCcCEEEEcCCCCHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEcCCeEEEEcCCCCh
Q 007313 321 ATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQ 400 (608)
Q Consensus 321 ~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~ 400 (608)
++|+.|+++|..+|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|++|++.+++++++++.+++
T Consensus 314 ~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~~LG~a~~v~~~~~~t~iig~~~~~ 393 (600)
T PLN03167 314 ATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKEVLGTAAKVVLTKDTTTIVGDGSTQ 393 (600)
T ss_pred HHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHHHCceeeEEEEecccceeeCCCccH
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcccccchHh
Q 007313 401 DAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 480 (608)
Q Consensus 401 ~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~gvVpGGGa~e 480 (608)
+.++.|+.+|++.++.+.++|++++|++|+++|++++++|+|||+|+.+++|+||+++||++++|+|+++|+|||||++|
T Consensus 394 ~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gvVpGGGa~e 473 (600)
T PLN03167 394 EAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL 473 (600)
T ss_pred HHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCceeeecCCCcccccccCCcccc
Q 007313 481 LRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDP 560 (608)
Q Consensus 481 l~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G~d~~~g~i~d~~~~gI~Dp 560 (608)
++|+.+|++++....+.+|+.+++++++||+.||++||+|||+|+.+++.+|+.++++++|||+.+|++.||++.|||||
T Consensus 474 l~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~~~~~G~d~~~g~~~dm~~~GI~Dp 553 (600)
T PLN03167 474 LRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNPKFGYNAATGKYEDLMAAGIIDP 553 (600)
T ss_pred HHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcCCCCEeEeCCCCcCcchHhccCeec
Confidence 99999999998778899998889999999999999999999999999999998666788999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCCCCC
Q 007313 561 TKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 608 (608)
Q Consensus 561 ~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~~~ 608 (608)
+.||+++|++|+++|++||++|++|+.+|++++. ++++||+++||||
T Consensus 554 ~~Vk~~al~~A~~~A~~iL~iD~iI~~~~~~~~~-~~~~~~~~~~~~~ 600 (600)
T PLN03167 554 TKVVRCCLEHAASVAKTFLTSDCVVVEIKEPEPV-PAGNPMDNSGYGY 600 (600)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCCCCCCCCCC
Confidence 9999999999999999999999999998877665 6778899999987
No 2
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=7.4e-114 Score=963.88 Aligned_cols=528 Identities=53% Similarity=0.842 Sum_probs=510.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| +++|+.+++|+..|+++|++||||+||||||+++.|+++|||||+||+|+|+++||++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~ 80 (545)
T PRK12852 3 AKDVKFS--GDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASK 80 (545)
T ss_pred cchhhcc--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||++|||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. ++.+||++|+++++.+++
T Consensus 81 q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~ 160 (545)
T PRK12852 81 TNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAIGK 160 (545)
T ss_pred cCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
|+++|+.+++++|.|.++.|+++.+.+++++|+.|+++|.+|||++++++|+++++||+|+++|++|++++++.++|+.+
T Consensus 161 li~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~~i 240 (545)
T PRK12852 161 MIAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLEAV 240 (545)
T ss_pred HHHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHHHH
Confidence 99999999999999999999987555599999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~ 320 (545)
T PRK12852 241 VQSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRA 320 (545)
T ss_pred HHhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
+.|++.+++++++.++++++.++.|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl 400 (545)
T PRK12852 321 KKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDAL 400 (545)
T ss_pred cEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
|++++++++|+|||||++|++++.+|.+++.. .+.+| +++++|++||+.||++||+|||+|+.+++.+|++.|++++|
T Consensus 401 ~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~q-~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G 478 (545)
T PRK12852 401 NATRAAVQEGIVPGGGVALLRAKKAVGRINND-NADVQ-AGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFG 478 (545)
T ss_pred HHHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCee
Confidence 99999999999999999999999999998865 55555 89999999999999999999999999999999887888899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
||+.+|+++||++.|||||+.||+++|++|+++|++||++|++|+.+|++...
T Consensus 479 ~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~ 531 (545)
T PRK12852 479 FDAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAELPKKDAA 531 (545)
T ss_pred EeCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHHHHhhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999998876544
No 3
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=9.5e-114 Score=960.18 Aligned_cols=530 Identities=61% Similarity=0.898 Sum_probs=508.6
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| +++|..+++|+..++++|++||||+||+|||+++.|+++|||||+||+|+|+++||.||+||+|++++|++
T Consensus 2 ~~~~~~~--~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~ 79 (542)
T PRK00013 2 AKDIKFG--EDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASK 79 (542)
T ss_pred Cchhhch--HHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHh
Confidence 5899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|+++. +|.++|++|+++++.+++
T Consensus 80 qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls~ 159 (542)
T PRK00013 80 TNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIGK 159 (542)
T ss_pred cCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
++++|+..++++|.|.++.+....+.+++++|++|+++|.+|||.++++.++++++||+|+++|++|++++++.++++++
T Consensus 160 lv~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~i 239 (542)
T PRK00013 160 LIAEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQV 239 (542)
T ss_pred HHHHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHHH
Confidence 99999999998888888655444444499999999999999999999989999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++++++|..|+++|+++|++||+|+||+.++++|+|||++|||++++++.|++++++++++||+|
T Consensus 240 ~~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~ 319 (542)
T PRK00013 240 AQSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQA 319 (542)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
+.|++.++++++++++++++.+..|+++|+.+++++.+.|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+
T Consensus 320 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal 399 (542)
T PRK00013 320 KKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDAL 399 (542)
T ss_pred eEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++++++++|+|||||++|++++.+|.++ .+.++.+| +++++|++||+.||++||+|||+|+.+++.+|+..|++++|
T Consensus 400 ~~vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G 477 (542)
T PRK00013 400 HATRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDEA-TGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGKGKGYG 477 (542)
T ss_pred HHHHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCEe
Confidence 99999999999999999999999999988 56667666 89999999999999999999999999999999887777899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 596 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 596 (608)
||+.+|++.||++.|||||+.||+++|+.|+++|++||++|++|..+|++.+..|
T Consensus 478 ~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~~~~~~~~~ 532 (542)
T PRK00013 478 YNAATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTEAVVADKPEKKAAAP 532 (542)
T ss_pred EeCCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC
Confidence 9999999999999999999999999999999999999999999999887654433
No 4
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.5e-113 Score=958.58 Aligned_cols=538 Identities=57% Similarity=0.867 Sum_probs=516.3
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|.|+|| +++|+.+++|+..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||.||+||+||+++|++
T Consensus 2 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~ 79 (542)
T PRK12849 2 AKIIKFD--EEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASK 79 (542)
T ss_pred Cccccch--HHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHh
Confidence 6899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. +|.++|+||+++++++++
T Consensus 80 qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~ 159 (542)
T PRK12849 80 TNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIGE 159 (542)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
++++|+..+++++.|.++.|++++|++++++|++|+++|.+|+|.++.+.|+++++||+|+++|++|++++++.++++++
T Consensus 160 lv~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~i 239 (542)
T PRK12849 160 LIAEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEKV 239 (542)
T ss_pred HHHHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHHH
Confidence 99999999999898899999999986699999999999999999998889999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++|+++|..|+++|.++|+|||+|+|+++++++|+|||.+|||++++++.+.+++++++++||+|
T Consensus 240 ~~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~ 319 (542)
T PRK12849 240 AQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRA 319 (542)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
+.|++++++++++.++++++.+..|+++|+++++++.++|++++|+||+++|++++|||+|||+|+.+++|++|+++||+
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl 399 (542)
T PRK12849 320 KRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDAL 399 (542)
T ss_pred eEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++++++++|+||||||+|++++.+|.+++ +.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+ +++|
T Consensus 400 ~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~-~~~G 476 (542)
T PRK12849 400 NATRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQA-AGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELE-DGFG 476 (542)
T ss_pred HHHHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhC-CCcc
Confidence 999999999999999999999999999998 6777766 899999999999999999999999999999998765 6899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 605 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 605 (608)
||+.+|++.||++.|||||+.+|.++|+.|+++|++||++|++|+.+|+...++++++||++||
T Consensus 477 ~d~~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~ 540 (542)
T PRK12849 477 FNAATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTEALVADKPEEEDPPGGMGGMGGMG 540 (542)
T ss_pred eeCCCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHHHHHhcCCccCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999887654423455666655
No 5
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.4e-113 Score=960.10 Aligned_cols=538 Identities=55% Similarity=0.841 Sum_probs=512.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|.|+|+ +++|+.+++|+.+|+++|++||||+||+|||+++.|+++|||||+||+++|+++||++|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~ 80 (544)
T PRK12850 3 AKEIRFS--TDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASK 80 (544)
T ss_pred cceeccc--HHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+++|+++||+++.+++++|+||..|++||++|++.++++|+++++|+++. +|.++|++|+++++.+++
T Consensus 81 qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~ 160 (544)
T PRK12850 81 TNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESIGE 160 (544)
T ss_pred hcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
+++||+..++++|.|.++.+....+++++++|++|+++|.+|||+++.++++++++||+||++|++|++.+++.++++++
T Consensus 161 lv~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~~i 240 (544)
T PRK12850 161 MIAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILEAV 240 (544)
T ss_pred HHHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHHHH
Confidence 99999999998888888766656666699999999999999999998888999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.|++++++++++||+|
T Consensus 241 ~~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~ 320 (544)
T PRK12850 241 VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRA 320 (544)
T ss_pred HHhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
++|++.+++++++++|++++.++.|+++++++++++.+.|++++|+||+++|++++|||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl 400 (544)
T PRK12850 321 KRVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDAL 400 (544)
T ss_pred cEEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++++++++|||||||++|++++.+|.++ .+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| .++|
T Consensus 401 ~~~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~-~~~G 477 (544)
T PRK12850 401 HATRAAVEEGIVPGGGVALLRARSALRGL-KGANADET-AGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELP-GNFG 477 (544)
T ss_pred HHHHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-CCcc
Confidence 99999999999999999999999999988 55666665 899999999999999999999999999999998764 5799
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCC---CCCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG---NPMDNSGY 606 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~---~~~~~~~~ 606 (608)
||+.+|++.||++.|||||+.||.++|++|+++|++||++|++|+.+|+..|+ |+. ++|++|||
T Consensus 478 ~d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~~~~~~~-~~~~~~~~~~~~~~ 544 (544)
T PRK12850 478 FNAQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTEAMVAEAPKKAAA-AAAGPGPGMGGMGY 544 (544)
T ss_pred eeCCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHHHhhccCCCCCCC-CCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999887666 433 34555543
No 6
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=2.2e-112 Score=949.92 Aligned_cols=540 Identities=51% Similarity=0.821 Sum_probs=516.8
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 007313 62 AAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (608)
Q Consensus 62 ~~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~ 141 (608)
.+|+|.|| +++|+.+++|+..|+++|++||||+||||||+++.|+|+|||||+||+|+|++++|+||+||+|++++|+
T Consensus 2 ~~~~~~~~--~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~ 79 (546)
T PRK14104 2 SAKEVKFG--VDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVAS 79 (546)
T ss_pred Ccceecch--HHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHH
Confidence 37999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHH
Q 007313 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVG 220 (608)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls 220 (608)
+||+++||||||+||||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. ++.+||++|+++++.++
T Consensus 80 ~qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~ 159 (546)
T PRK14104 80 KSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIG 159 (546)
T ss_pred hhcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHH
Q 007313 221 NMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLED 300 (608)
Q Consensus 221 ~Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~ 300 (608)
+++++|+.+++++|.|.++.++++++++++++|++|+++|.+|||+++++.++.++++|+|+++|.++++++++.++|+.
T Consensus 160 ~lv~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~ 239 (546)
T PRK14104 160 KFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEA 239 (546)
T ss_pred HHHHHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHH
Confidence 99999999999999999988888866669999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcc
Q 007313 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (608)
Q Consensus 301 ~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (608)
+.+.|+||||++++|+++|+++|..|+++|.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+
T Consensus 240 i~~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~ 319 (546)
T PRK14104 240 VVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGR 319 (546)
T ss_pred HHHhCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred eeEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHH
Q 007313 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (608)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DA 460 (608)
|++|++++++++++++|++++.+++|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||
T Consensus 320 a~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Da 399 (546)
T PRK14104 320 AKKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDA 399 (546)
T ss_pred eeEEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCce
Q 007313 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKY 540 (608)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~ 540 (608)
++++++++++|+|||||++|++++.+|.++.. ..+. +++++++|++||+.||++||+|||+|+.+++.+|+..+.+++
T Consensus 400 l~a~~~ai~~g~VpGGGa~e~~~s~~L~~~~~-~~~~-~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~~ 477 (546)
T PRK14104 400 MHATRAAVEEGIVPGGGVALLRASEQLKGIKT-KNDD-QKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSY 477 (546)
T ss_pred HHHHHHHHHcCcCcCchHHHHHHHHHHHHhhc-CChH-HHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcCCCcE
Confidence 99999999999999999999999999998853 4444 458999999999999999999999999999999987667789
Q ss_pred eeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007313 541 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 605 (608)
Q Consensus 541 G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 605 (608)
|||+.+|++.||++.|||||+.||+++|++|+++|++||++|++|...|+.....|..+|||+||
T Consensus 478 G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id~~I~~~~~~~~~~~~~~~~~~~~ 542 (546)
T PRK14104 478 GFDSQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGAGPAMPPGGGMG 542 (546)
T ss_pred eEeCCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999887766645556777766
No 7
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.9e-111 Score=942.30 Aligned_cols=527 Identities=57% Similarity=0.863 Sum_probs=505.8
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|.+.|+ +++|+.+++|+..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||.+|+||+|++++|++
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~ 80 (541)
T PRK12851 3 AKEVKFH--VEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASK 80 (541)
T ss_pred cceeccc--HHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHh
Confidence 6899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. ++.+||++|+++++.|++
T Consensus 81 qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~~ 160 (541)
T PRK12851 81 TNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIGR 160 (541)
T ss_pred hhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
++++|+..++++|.|.++.+....+++++++|++|+++|.+|||+++.++|+++++||+||++|+++++.+++.++++.+
T Consensus 161 lv~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i 240 (541)
T PRK12851 161 LVAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEAV 240 (541)
T ss_pred HHHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHHH
Confidence 99999999998888877655444445599999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++++++|+.|+++|.++|+|||+|+||++++++|+|||++|||++++++.+++++++++++||+|
T Consensus 241 ~~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~ 320 (541)
T PRK12851 241 VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRA 320 (541)
T ss_pred HHhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
+.|++.+++++++++++++++++.|+++++++++++.++|++++|++|+++|+|+++||+|||+|+.+++|++|+++||+
T Consensus 321 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl 400 (541)
T PRK12851 321 KKVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDAL 400 (541)
T ss_pred cEEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++++++++|||||||++|++++.+|.+++.. .+.+| +++++|++||+.||++||+|||+|+.+++.+|++.| .++|
T Consensus 401 ~a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~-~~~G 477 (541)
T PRK12851 401 HATRAAVEEGIVPGGGVALLRAVKALDKLETA-NGDQR-TGVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKP-GGYG 477 (541)
T ss_pred HHHHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhC-CCee
Confidence 99999999999999999999999999998865 55555 899999999999999999999999999999998765 4799
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
||+.+|+++||++.|||||+.||+++|+.|+++|++||++|++|+.+|+.+|+
T Consensus 478 ~d~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 530 (541)
T PRK12851 478 FNAATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTEAMVAEKPKKEPA 530 (541)
T ss_pred eeCCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999877666
No 8
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=1.9e-110 Score=937.57 Aligned_cols=526 Identities=52% Similarity=0.838 Sum_probs=508.1
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
++++.|+ +++|..+++|+..|+++|++||||+||||||+++.|+|+|||||+||+|+|+++||.+|+||+|++++|++
T Consensus 14 ~~~~~~~--~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~ 91 (555)
T PTZ00114 14 GKEIRFG--DEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASK 91 (555)
T ss_pred hhhhhhH--HHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHh
Confidence 6788899 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++. +|.++|+||+++++++++
T Consensus 92 qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~ 171 (555)
T PTZ00114 92 TNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIGS 171 (555)
T ss_pred hccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
++++|+.+++++|.|.+++|++++|++++++|++|+++|.+|||+++++.|+++++||+||++|++|++++++.++++++
T Consensus 172 li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~i 251 (555)
T PTZ00114 172 LIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEHA 251 (555)
T ss_pred HHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeecc-CCccccCCCCCCCcc
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDE-VGLALDKVGKEVLGN 380 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~-~~~~l~~~~~~~lG~ 380 (608)
.+.|+||||++++|+++|+++|..|+++|.++|+|||+|++|++++++|+|||++|||+++++. .+..++++++++||+
T Consensus 252 ~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~ 331 (555)
T PTZ00114 252 VKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGS 331 (555)
T ss_pred HHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999986 677788999999999
Q ss_pred eeEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHH
Q 007313 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (608)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DA 460 (608)
|++|++.++++++++++++++.|+.|+++++.++++..+.|++++|+||+++|++++|||+|||+|+.+++|++|+++||
T Consensus 332 a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Da 411 (555)
T PTZ00114 332 AKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDA 411 (555)
T ss_pred CceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccccchHhHHHHHHHHHHhh--cCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCC
Q 007313 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE--TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNH 538 (608)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~--~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~ 538 (608)
++++++++++|||||||++|++++.+|.+++. ..++.+| +++++|++||+.||++||+|||+|+.+++.+|++.+++
T Consensus 412 l~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~ 490 (555)
T PTZ00114 412 LNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQR-TGVKIVRNALRLPTKQIAENAGVEGAVVVEKILEKKDP 490 (555)
T ss_pred HHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999875 4556655 89999999999999999999999999999999864577
Q ss_pred ceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 007313 539 KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 591 (608)
Q Consensus 539 ~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 591 (608)
++|||+.+|++.||++.|||||+.||+++|++|+++|++||++|++|...|+.
T Consensus 491 ~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 543 (555)
T PTZ00114 491 SFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTEAAIVDLPKE 543 (555)
T ss_pred CEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHHHHHHhCCcc
Confidence 89999999999999999999999999999999999999999999999998765
No 9
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.8e-110 Score=933.57 Aligned_cols=523 Identities=55% Similarity=0.873 Sum_probs=503.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|+ +++|+++++||..|+++|++||||+||+|||+++.|+++|||||+||+|+|+++||++++|++|++++|.+
T Consensus 2 ~~~~~~~--~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~ 79 (529)
T CHL00093 2 SKKILYQ--DNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASK 79 (529)
T ss_pred CceeecC--HHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHh
Confidence 6899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
|++++||||||++||+++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++. +|.+||++|+++++.|++
T Consensus 80 ~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~~ 159 (529)
T CHL00093 80 TNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVGS 159 (529)
T ss_pred cCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999866 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCH-HHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-RDLINVLED 300 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~-~~l~~~le~ 300 (608)
|+++|+.+++++|.|.++.|+..++.+++++|+.|+++|.+|||++++++|+++++||+|+++|++|+.. .++.++++.
T Consensus 160 lv~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~~ 239 (529)
T CHL00093 160 MIADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILEQ 239 (529)
T ss_pred HHHHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHHH
Confidence 9999999999999898877776666669999999999999999999999999999999999999999987 789999999
Q ss_pred HHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcc
Q 007313 301 AIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN 380 (608)
Q Consensus 301 ~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~ 380 (608)
+.+.+.|+||++++|+++++++|+.|+++|+.+|+|||+|++|++++++|+|||++|||++++++.|.+++++++++||+
T Consensus 240 i~~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~ 319 (529)
T CHL00093 240 VTKTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQ 319 (529)
T ss_pred HHhcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred eeEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHH
Q 007313 381 ASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDA 460 (608)
Q Consensus 381 ~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DA 460 (608)
|++|++.+++++++. .++++.+..||++++++++.+.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||
T Consensus 320 ~~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DA 398 (529)
T CHL00093 320 ARRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDA 398 (529)
T ss_pred ceEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHH
Confidence 999999999999998 6678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCcccccchHhHHHHHHHHHHhh-cCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCc
Q 007313 461 LNATKAAVEEGIVVGGGCTLLRLSSKVDAIKE-TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK 539 (608)
Q Consensus 461 l~a~~~al~~gvVpGGGa~el~ls~~L~~~~~-~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~ 539 (608)
++++|+++++|+|||||++|++|+.+|.+++. +.++.+| +++++|++||+.||++||+|||+|+.+++.+|+.. +.+
T Consensus 399 l~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~-~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-~~~ 476 (529)
T CHL00093 399 INATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDEL-IGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQ-DFE 476 (529)
T ss_pred HHHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHcc-CCC
Confidence 99999999999999999999999999999876 5667666 89999999999999999999999999999999765 568
Q ss_pred eeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007313 540 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 590 (608)
Q Consensus 540 ~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 590 (608)
+|||+.+|+++||++.|||||+.||+++|++|+++|++||++|++|+.+|+
T Consensus 477 ~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 527 (529)
T CHL00093 477 IGYNAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTTECIIVDKKE 527 (529)
T ss_pred EeEECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999998764
No 10
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=4.6e-110 Score=929.35 Aligned_cols=521 Identities=61% Similarity=0.898 Sum_probs=503.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
|+|.|| +++|+.+++|+..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~--~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~q 79 (524)
T TIGR02348 2 KQIKFD--EEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKT 79 (524)
T ss_pred cccccc--HHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHcc
Confidence 789999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHHH
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~L 222 (608)
|+++||||||+++|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++. +|.++|++|++++++++++
T Consensus 80 d~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~l 159 (524)
T TIGR02348 80 NDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSL 159 (524)
T ss_pred CceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 8999999999999999999
Q ss_pred HHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHH
Q 007313 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (608)
Q Consensus 223 i~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~ 302 (608)
+++|+..+++++.|.++.|+..+|.+++++|++|+++|.+|+|.++++++++.++||+||++|++|++++++.++++++.
T Consensus 160 v~~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~ 239 (524)
T TIGR02348 160 IAEAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVA 239 (524)
T ss_pred HHHHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHH
Confidence 99999999999989998898887766999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCccee
Q 007313 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (608)
Q Consensus 303 ~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (608)
+.|+||||++++|+++|+++|+.|+++|+++|++||+|+||+.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~ 319 (524)
T TIGR02348 240 QSGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAK 319 (524)
T ss_pred HhCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred EEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007313 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (608)
Q Consensus 383 ~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~ 462 (608)
.|++.++++++++++++++.+..|+++++++++++.+.|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|
T Consensus 320 ~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~ 399 (524)
T TIGR02348 320 KVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALN 399 (524)
T ss_pred EEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCceee
Q 007313 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGY 542 (608)
Q Consensus 463 a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G~ 542 (608)
++|+++++|||||||++|++++.+|.+ ..+.++.+| +++++|++||+.||++||+|||+|+.+++++|++. +.++||
T Consensus 400 ~~r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~~~-~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~-~~~~G~ 476 (524)
T TIGR02348 400 ATRAAVEEGIVPGGGVALLRAAAALEG-LKGDNEDEA-IGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKES-KGNFGF 476 (524)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHH-hccCChHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhc-CCCeeE
Confidence 999999999999999999999999998 656666655 89999999999999999999999999999999875 335999
Q ss_pred ecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007313 543 NAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 589 (608)
Q Consensus 543 d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 589 (608)
|+.+|++.||++.|||||+.||.++|++|+++|++||++|++|...|
T Consensus 477 d~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 523 (524)
T TIGR02348 477 NAATGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTEAVVADKP 523 (524)
T ss_pred eCcCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcCC
Confidence 99999999999999999999999999999999999999999998654
No 11
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.9e-111 Score=890.35 Aligned_cols=527 Identities=56% Similarity=0.841 Sum_probs=516.7
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHH
Q 007313 58 PKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVR 137 (608)
Q Consensus 58 ~~~~~~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~ 137 (608)
+| | +|+|+|| .++|+.+++|++.|||+|.+||||||||++|.+++|.|+|||||+|++++++++++++|+||+|++
T Consensus 13 ~r-~-ak~i~fg--~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq 88 (550)
T KOG0356|consen 13 VR-Y-AKDIKFG--KDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQ 88 (550)
T ss_pred cc-c-ccccccC--HHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHH
Confidence 44 5 9999999 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCCh
Q 007313 138 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNN 216 (608)
Q Consensus 138 ~~a~~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~ 216 (608)
+++.++|+.+||||||+++|++++.+|+++-+.+|.+|.+|++|++++++.++++|+++++|++.. ++.+||++|+|+|
T Consensus 89 ~va~~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD 168 (550)
T KOG0356|consen 89 DVANNTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGD 168 (550)
T ss_pred HHHhhccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999988 9999999999999
Q ss_pred hHHHHHHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHH
Q 007313 217 YEVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIN 296 (608)
Q Consensus 217 ~~ls~Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~ 296 (608)
.++++++.+|+.++|++|+|+++.|.+++|++++++||.|++||++|||++++++++++|++|++|+++++|++++++.|
T Consensus 169 ~~ig~li~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp 248 (550)
T KOG0356|consen 169 KEIGNLISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVP 248 (550)
T ss_pred HHHHHHHHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCC-ccccCCCC
Q 007313 297 VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG-LALDKVGK 375 (608)
Q Consensus 297 ~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~-~~l~~~~~ 375 (608)
.||...+...||||+++||+.++|.+|+.|++++.++|+|||+|+|||.|++.+.||+.+||++++.++.+ ++++++++
T Consensus 249 ~LE~A~~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~ 328 (550)
T KOG0356|consen 249 ALELALAKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKL 328 (550)
T ss_pred HHHHhhhccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988 88999999
Q ss_pred CCCcceeEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHH
Q 007313 376 EVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKL 455 (608)
Q Consensus 376 ~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r 455 (608)
++||.++++++++++++++.+.++++++++||+|++..++.+.++|++++++||+++|++++++|.|||.|+.|++|++.
T Consensus 329 ~dLG~~~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~ 408 (550)
T KOG0356|consen 329 EDLGEVGEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKD 408 (550)
T ss_pred hhcCcceeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc
Q 007313 456 RVEDALNATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS 535 (608)
Q Consensus 456 ~l~DAl~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~ 535 (608)
|++||||++++|+++|+|||||+++++|+..|+++.. ..+.+|+.|++++.+||..|+++|++|||+|+..++.|++.
T Consensus 409 rv~dalnat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~- 486 (550)
T KOG0356|consen 409 RVEDALNATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN- 486 (550)
T ss_pred hHHHHHHHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh-
Confidence 9999999999999999999999999999999999886 56788889999999999999999999999999999999983
Q ss_pred CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007313 536 DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 592 (608)
Q Consensus 536 ~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 592 (608)
.++|||..+|+|+||++.||+||++|.+++|..|..+|+++++++.+|++.|+++
T Consensus 487 --~~~gyda~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~tte~vvteipk~~ 541 (550)
T KOG0356|consen 487 --DDYGYDAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTTTEAVVTEIPKEE 541 (550)
T ss_pred --hhhhhhhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhhheeEEEeccccc
Confidence 3999999999999999999999999999999999999999999999999999987
No 12
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=6.4e-109 Score=918.73 Aligned_cols=518 Identities=62% Similarity=0.929 Sum_probs=503.2
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
|+|.|| +++|..+++|+..|+++|+|||||+||+|||++++|+++|||||+||+|+|+++||.+|+||+|++++|++|
T Consensus 1 ~~~~~g--~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~q 78 (520)
T cd03344 1 KDIKFG--EEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKT 78 (520)
T ss_pred Ccccch--HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhh
Confidence 578999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHHH
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGNM 222 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~L 222 (608)
|+++||||||+++|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++. +|.++|+||++++++++++
T Consensus 79 d~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~l 158 (520)
T cd03344 79 NDVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGEL 158 (520)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999866 8999999999999999999
Q ss_pred HHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHH
Q 007313 223 IAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAI 302 (608)
Q Consensus 223 i~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~ 302 (608)
+++|+..+++++.|.+++|++++|++++++|++|+++|.+|+|.+++++|+++++||+|+++|+++++++++.++++++.
T Consensus 159 v~~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~ 238 (520)
T cd03344 159 IAEAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVA 238 (520)
T ss_pred HHHHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999988889999999999966999999999999999999988889999999999999999999999999999999
Q ss_pred HcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCccee
Q 007313 303 RGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNAS 382 (608)
Q Consensus 303 ~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~ 382 (608)
+.|+||||++++|+++++++|..|+++|.++|++||+|++|++++++|+|||++|||++++.+++++++++++++||+|+
T Consensus 239 ~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~ 318 (520)
T cd03344 239 KAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAK 318 (520)
T ss_pred hhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007313 383 KVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALN 462 (608)
Q Consensus 383 ~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~ 462 (608)
+|++++++++++.++++++.++.|+++++++++++.++|++++|+||+++|++++|||+|||+|+.+++|++|+++||++
T Consensus 319 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~ 398 (520)
T cd03344 319 KVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALN 398 (520)
T ss_pred EEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCceee
Q 007313 463 ATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGY 542 (608)
Q Consensus 463 a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G~ 542 (608)
++++++++|+|||||++|++++.+|.+++. .++.+| +++++|++||+.||++||+|||+|+.+++++|+..|+ ++||
T Consensus 399 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~~~-~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~-~~G~ 475 (520)
T cd03344 399 ATRAAVEEGIVPGGGVALLRASPALDKLKA-LNGDEK-LGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPD-GFGY 475 (520)
T ss_pred HHHHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcC-CEeE
Confidence 999999999999999999999999999987 667666 8999999999999999999999999999999987666 8999
Q ss_pred ecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007313 543 NAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 586 (608)
Q Consensus 543 d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 586 (608)
|+.+|++.||++.|||||+.||.++|+.|+++|++||++|.+|.
T Consensus 476 d~~~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 476 DAATGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTTEALVV 519 (520)
T ss_pred ECCCCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 99999999999999999999999999999999999999999886
No 13
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-93 Score=786.75 Aligned_cols=499 Identities=45% Similarity=0.663 Sum_probs=452.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+++..|| .++|..|+.|++.|+++|++||||+||||||+++.|+|.|||||+||+|+|+++||. |||++++|.+
T Consensus 3 ~~~~~~~--~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp~----akll~eva~~ 76 (524)
T COG0459 3 GKERKFG--EDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHPG----AKLLVEVAKK 76 (524)
T ss_pred ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCch----hHHHHHHHHH
Confidence 7889999 999999999999999999999999999999999977999999999999999999997 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch--HHHHHHHh-----hcCC
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAV-----SAGN 215 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~l~~va~t-----s~~~ 215 (608)
||+++||||||+|||+++||+++.+++.+|+||+.|++||++|.+.++++|+++++|+++. +. +++.+ ++++
T Consensus 77 qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~-~~~~t~v~sk~~~~ 155 (524)
T COG0459 77 QDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEEL-KIAITSVASKSANS 155 (524)
T ss_pred HHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhh-hhhhheeeeeeccC
Confidence 9999999999999999999999999999999999999999999999999999999999865 22 44444 4556
Q ss_pred hhHHHHHHHHHHHhhcc-----CCcEEEe-cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC
Q 007313 216 NYEVGNMIAEAMSKVGR-----KGVVTLE-EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (608)
Q Consensus 216 ~~~ls~Li~eAi~~vg~-----~g~I~v~-~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~ 289 (608)
+++|++++++|+.+++. ++++.++ .|++.+|+ ++++||+|+++|.+|||.++ +.++||+||++|++|+
T Consensus 156 ~~~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~~~~-----~~~e~~~Ili~d~~l~ 229 (524)
T COG0459 156 DEEIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYFMPD-----KRLENPKILLLDKKLE 229 (524)
T ss_pred hHHHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCCCCc-----cccccceEEEEccccc
Confidence 78999999999999998 7877664 56666666 99999999999999998543 6889999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCcc
Q 007313 290 NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA 369 (608)
Q Consensus 290 ~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~ 369 (608)
..+..++ ++...+.+.|+++++++++++++..++.|.+++.+++++|+.|+|+|.++++|+|++++|++++.+++++
T Consensus 230 ~~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~-- 306 (524)
T COG0459 230 IKKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG-- 306 (524)
T ss_pred cccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhH--
Confidence 9999888 8888888889999999999999999999999999999999999999999999999999999999998664
Q ss_pred ccCCCCCCCcceeEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHhhcCCeEEEEecCCCHH
Q 007313 370 LDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENA-EQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (608)
Q Consensus 370 l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~-~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~ 448 (608)
+ ....+|.|+.|...++.+....|.+. ..++++. .++|+++++++|.++ .+++|||+|||+|+.
T Consensus 307 -~--~l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate~ 371 (524)
T COG0459 307 -E--RLAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATEV 371 (524)
T ss_pred -H--HHHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccHh
Confidence 1 45678889999888777766665320 2233444 678999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHH
Q 007313 449 ELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSV 527 (608)
Q Consensus 449 ~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~ 527 (608)
+++|++|++||||+++++++++| +|||||++|++++..|++++.+.++.+|++++++|++||+.||++|++|||+|+.+
T Consensus 372 ~ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~ 451 (524)
T COG0459 372 ELDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIE 451 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999 99999999999999999984334443556999999999999999999999999999
Q ss_pred HHHHHHhcCC-CceeeecCCCcc-cccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007313 528 VSEKVLSSDN-HKYGYNAATGNY-EDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 592 (608)
Q Consensus 528 vi~kL~~~~~-~~~G~d~~~g~i-~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 592 (608)
++.+|++.|+ +++|||+.+|++ .||++.|||||++||+++|++|+++|.+|||+|++|.+.|+++
T Consensus 452 v~~~L~~~~~~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~~~~~ 518 (524)
T COG0459 452 VLSKLRSAHATTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAKPEEK 518 (524)
T ss_pred HHHHHHhcccCCccceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccCCccc
Confidence 9999998776 569999999999 7799999999999999999999999999999999999998864
No 14
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=4.3e-91 Score=778.86 Aligned_cols=457 Identities=25% Similarity=0.392 Sum_probs=420.7
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhc
Q 007313 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (608)
Q Consensus 65 ~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d 144 (608)
+..+| .++++.+++||..|+++|++||||+||+|||++++|+++|||||+||+++|+++||. |+|++++|++||
T Consensus 9 ~~~~~--~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~ 82 (517)
T cd03343 9 QRTSG--RDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 82 (517)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 34556 889999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCCh-----
Q 007313 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN----- 216 (608)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~----- 216 (608)
+++||||||+++|+++|++++.+++++|+||..|++||++|.+.+++.|++++++++ +. .|.+||++|++++
T Consensus 83 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~ 162 (517)
T cd03343 83 EEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAA 162 (517)
T ss_pred HHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhH
Confidence 999999999999999999999999999999999999999999999999999999986 44 8999999999865
Q ss_pred -hHHHHHHHHHHHhhccCCc---------EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 217 -YEVGNMIAEAMSKVGRKGV---------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 217 -~~ls~Li~eAi~~vg~~g~---------I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
+.|++|+++|+.++++++. |.+ ++|++++|| ++++|++|+++|.+|+| ++.++||+|+++
T Consensus 163 ~~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~m-------~~~~~n~~Illl 234 (517)
T cd03343 163 KDKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPGM-------PKRVENAKIALL 234 (517)
T ss_pred HHHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCCC-------ccccCCCcEEEE
Confidence 8999999999999987642 665 799999998 89999999999999875 467899999999
Q ss_pred ecC-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecC
Q 007313 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (608)
Q Consensus 285 d~~-------------I~~~~~l~~-----------~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~ 340 (608)
+++ +++++++.+ +++++.+.|+||||++++|+++++++|..+ +|++|+
T Consensus 235 ~~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~------gI~~v~-- 306 (517)
T cd03343 235 DAPLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKA------GILAVR-- 306 (517)
T ss_pred eccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CcEEEE--
Confidence 998 577777655 455899999999999999999999999764 456776
Q ss_pred CcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHHhh
Q 007313 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (608)
Q Consensus 341 ~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~ 417 (608)
++++++|+|||++|||++++ ++++++++.||+|++|++. +++++++++|+++
T Consensus 307 ---~v~~~~l~~Ia~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~----------------- 361 (517)
T cd03343 307 ---RVKKSDMEKLARATGAKIVT-----NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP----------------- 361 (517)
T ss_pred ---eCCHHHHHHHHHHhCCEEec-----chhhCChhhCCccceEEEEEECCeEEEEEEcCCCC-----------------
Confidence 67799999999999999999 6889999999999999854 8899999988764
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCCh
Q 007313 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (608)
Q Consensus 418 ~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (608)
..|||+|||+|+.+++|++|+++||++++|+++++| +|||||++||+|+.+|++++...++
T Consensus 362 ------------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~ 423 (517)
T cd03343 362 ------------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGG 423 (517)
T ss_pred ------------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCC
Confidence 378999999999999999999999999999999999 9999999999999999999877777
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHH
Q 007313 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASS 573 (608)
Q Consensus 497 ~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e 573 (608)
.+| +++++|++||+.||++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 424 ~~~-~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e 502 (517)
T cd03343 424 REQ-LAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATE 502 (517)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHH
Confidence 666 89999999999999999999999999999999854 34679999999999999999999999999999999999
Q ss_pred HHHHHhchhHHhhc
Q 007313 574 VAKTFLMSDCVVVE 587 (608)
Q Consensus 574 ~a~~iL~iD~iI~~ 587 (608)
+|++|||+|++|+.
T Consensus 503 ~a~~iL~id~ii~~ 516 (517)
T cd03343 503 AATMILRIDDVIAA 516 (517)
T ss_pred HHHHHHhhhHhhhC
Confidence 99999999999965
No 15
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1e-91 Score=776.46 Aligned_cols=448 Identities=24% Similarity=0.367 Sum_probs=412.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 11 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~~~GDGT 86 (484)
T cd03342 11 GQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDDITGDGT 86 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhhHhCCCh
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC---ch-HHHHHHHhhcCCh------hHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE---DS-ELADVAAVSAGNN------YEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~---~~-~l~~va~ts~~~~------~~ls~ 221 (608)
||++||+++||+++.+++++|+||..|++||++|.+.+++.|++++++++ +. .|.+||++|++++ +.|++
T Consensus 87 Tt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~ 166 (484)
T cd03342 87 TSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADLADQLTE 166 (484)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 8999999999875 89999
Q ss_pred HHHHHHHhhccCC-c-------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHH
Q 007313 222 MIAEAMSKVGRKG-V-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD 293 (608)
Q Consensus 222 Li~eAi~~vg~~g-~-------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~ 293 (608)
++++|+..+++++ . |...+|++++|+ ++++|++|+++|.+|+| +++++||+|+++|++++..+.
T Consensus 167 l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~m-------~~~~~n~~Ill~~~~le~~~~ 238 (484)
T cd03342 167 IVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPDM-------PKRVENAYILTCNVSLEYEKT 238 (484)
T ss_pred HHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCCC-------CccccCceEEEEeCCCCCCcc
Confidence 9999999998876 1 333588999998 99999999999999975 667899999999999887654
Q ss_pred HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCC
Q 007313 294 LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKV 373 (608)
Q Consensus 294 l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~ 373 (608)
-.+. ..-.+|||++++|++.++++|..| +|+||+ ++++++|+|||++|||++++ +++++
T Consensus 239 ~~~~-----~~~~~lvi~~~~I~~~al~~l~~~------~I~av~-----~~~~~~l~~ia~~tGa~ii~-----~l~~~ 297 (484)
T cd03342 239 EVNS-----GFFYSVVINQKGIDPPSLDMLAKE------GILALR-----RAKRRNMERLTLACGGVAMN-----SVDDL 297 (484)
T ss_pred ccCc-----EEEEEEEEeCCCccHHHHHHHHHC------CCeEEE-----eCCHHHHHHHHHHhCCEEec-----ccccC
Confidence 2110 112469999999999999999988 478888 46689999999999999999 68999
Q ss_pred CCCCCcceeEE---EEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHH
Q 007313 374 GKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETEL 450 (608)
Q Consensus 374 ~~~~lG~~~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l 450 (608)
++++||+|++| ++++++++++++|+++ ++|||+|||+|+.++
T Consensus 298 ~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lrg~t~~~l 342 (484)
T cd03342 298 SPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIKGPNDHTI 342 (484)
T ss_pred ChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEeCCCHHHH
Confidence 99999999999 5788899999988763 589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHH
Q 007313 451 KEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVS 529 (608)
Q Consensus 451 ~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi 529 (608)
+|.||+++||++++++++++| +||||||+|++|+.+|++++.+..+.+| +++++|++||+.||++||+|||+|+.+++
T Consensus 343 ~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~-~~i~~~a~Al~~ip~~La~NaG~d~~~~l 421 (484)
T cd03342 343 TQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAK-LGVQAFADALLVIPKTLAENSGLDVQETL 421 (484)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 999999999999999999999 9999999999999999999877777666 89999999999999999999999999999
Q ss_pred HHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhcc
Q 007313 530 EKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI 588 (608)
Q Consensus 530 ~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 588 (608)
.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+.+
T Consensus 422 ~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 422 VKLQDEYAEGGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred HHHHHHHHccCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 9998653 5679999999999999999999999999999999999999999999999764
No 16
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.6e-91 Score=779.42 Aligned_cols=459 Identities=25% Similarity=0.338 Sum_probs=415.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+++|+.|++||..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+|++++|++|++++||||
T Consensus 7 ~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~GDGT 82 (527)
T cd03335 7 QDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEVGDGT 82 (527)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccC--ch-HHHHHHHhhcC-----C-hhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG-----N-NYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~-----~-~~~ls~ 221 (608)
||+|||+++||+++.+++++|+||+.|++||++|.+.+++.|++ +++|++ +. .|.++|+|+++ + .+.|++
T Consensus 83 Tt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 162 (527)
T cd03335 83 TSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFFAN 162 (527)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHHHHHH
Confidence 99999999999999999999999999999999999999999996 899987 44 79999999987 2 489999
Q ss_pred HHHHHHHhhcc---CCc---------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC
Q 007313 222 MIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (608)
Q Consensus 222 Li~eAi~~vg~---~g~---------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~ 289 (608)
++++|+..++. +|. |...+|++++|+ ++++|++|+++|.+| +|+++++||+|++++++++
T Consensus 163 l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~-------~m~~~i~n~kIlll~~~Le 234 (527)
T cd03335 163 MVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNLQ 234 (527)
T ss_pred HHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCC-------CCcccccCCcEEEEeccCC
Confidence 99999999952 232 234689999998 999999999999987 3777899999999999864
Q ss_pred C-------------HHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 290 N-------------ARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 290 ~-------------~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
. +++ +.++++++.+.|+||||++++|++.++++|..+ +|++++ ++
T Consensus 235 ~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~------~I~~v~-----~v 303 (527)
T cd03335 235 KTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RV 303 (527)
T ss_pred CCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eC
Confidence 3 222 346788888999999999999999999999987 567776 67
Q ss_pred cchhHHHHHHHhCCeEeeccCCc-cccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHH
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (608)
++++|+|||++|||+++++..++ ..+++++++||+|++|+ ++++++++|.+|++
T Consensus 304 ~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~---------------------- 361 (527)
T cd03335 304 KKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKK---------------------- 361 (527)
T ss_pred CHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCC----------------------
Confidence 79999999999999999964333 12345667899999998 78889999998865
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHH
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (608)
+++|||+|||+|+.+++|.+|+++||++++++++++| +||||||+|++|+.+|+++++...+.+|
T Consensus 362 -------------~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~- 427 (527)
T cd03335 362 -------------RSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 427 (527)
T ss_pred -------------CCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCcHHH-
Confidence 3689999999999999999999999999999999999 9999999999999999999877777776
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCceeeecCCCcccccccCCcccchHHHHHHHH
Q 007313 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (608)
Q Consensus 501 ~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~-----------~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~ 569 (608)
+++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|++.||++.|||||+.+|+++|+
T Consensus 428 ~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~k~~~i~ 507 (527)
T cd03335 428 LAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKIKSLK 507 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCcccchhhccceecHHHHHHHHH
Confidence 899999999999999999999999999999998642 357999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHHhhccC
Q 007313 570 HASSVAKTFLMSDCVVVEIK 589 (608)
Q Consensus 570 ~A~e~a~~iL~iD~iI~~~~ 589 (608)
.|+|+|++|||||++|...|
T Consensus 508 ~A~e~a~~iLrID~ii~~~~ 527 (527)
T cd03335 508 FATEAAITILRIDDLIKLNP 527 (527)
T ss_pred HHHHHHHHHHhhcceeecCC
Confidence 99999999999999997755
No 17
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.2e-91 Score=775.44 Aligned_cols=456 Identities=23% Similarity=0.359 Sum_probs=415.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..|+.+|.+|+++|+|||||+||+|||++++|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~~~GDGT 90 (531)
T TIGR02347 15 DAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDDITGDGT 90 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhhhhcCcH
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccccc---Cch-HHHHHHHhhcCC------hhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV---EDS-ELADVAAVSAGN------NYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v---~~~-~l~~va~ts~~~------~~~ls~ 221 (608)
||++||+++||+++.+++++|+||..|++||+.|++.+++.|+++++++ .+. .|.++|++++++ +++|++
T Consensus 91 TtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~ 170 (531)
T TIGR02347 91 TSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDLADQLTE 170 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999765 344 899999999864 789999
Q ss_pred HHHHHHHhhccCCc------EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCH--
Q 007313 222 MIAEAMSKVGRKGV------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA-- 291 (608)
Q Consensus 222 Li~eAi~~vg~~g~------I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~-- 291 (608)
++++|+..+++++. |.+ ..|++.+|+ ++++|++|+++|.+|+| +++++||+|+++|++++..
T Consensus 171 iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~~-------~~~~~n~~Ill~~~~le~~~~ 242 (531)
T TIGR02347 171 IVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPDM-------PRRVKNAYILTCNVSLEYEKT 242 (531)
T ss_pred HHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCCC-------ceeccCceEEEEeCCCCCCcc
Confidence 99999999988753 332 578999998 99999999999999974 5688999999999986432
Q ss_pred -----------HH-----------HHHHHHHHHHcCC-------C---EEEEcccchHHHHHHHHHHhhcccceEEEeec
Q 007313 292 -----------RD-----------LINVLEDAIRGAY-------P---ILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (608)
Q Consensus 292 -----------~~-----------l~~~le~~~~~~~-------~---lvIia~~I~~~al~~L~~nk~~g~~~i~avk~ 339 (608)
++ +...++++.+.+. + ||+++++|++.++++|.++ +|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~------~I~~i~- 315 (531)
T TIGR02347 243 EVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKE------GIMALR- 315 (531)
T ss_pred ccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHC------CceEEc-
Confidence 22 3445677777551 4 9999999999999999886 567777
Q ss_pred CCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEE---EEcCCeEEEEcCCCChhHHHHHHHHHHHHHHh
Q 007313 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (608)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~ 416 (608)
++++++|+|||++|||++++ +++++++++||+|++| .++++++++|++|+++
T Consensus 316 ----rv~~~~le~ia~~tGa~~i~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------- 370 (531)
T TIGR02347 316 ----RAKRRNMERLTLACGGEALN-----SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP---------------- 370 (531)
T ss_pred ----cCCHHHHHHHHHHhCCEEec-----ccccCCccccccceEEEEEEECCeEEEEEEcCCCC----------------
Confidence 55688999999999999998 7899999999999999 6788899999988764
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCC
Q 007313 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (608)
Q Consensus 417 ~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (608)
++|||+|||+|+.+++|++|+++||++++++++++| +||||||+|++|+.+|++++.+.+
T Consensus 371 -------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~~ 431 (531)
T TIGR02347 371 -------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSVK 431 (531)
T ss_pred -------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcCC
Confidence 489999999999999999999999999999999999 999999999999999999987777
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCC---CceeeecCCCcccccccCCcccchHHHHHHHHHHH
Q 007313 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDN---HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (608)
Q Consensus 496 ~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~---~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~ 572 (608)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+..|+ .++|||+.+|+++||++.|||||+.||+++|++|+
T Consensus 432 ~~~~-~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gV~Dp~~vk~~al~~A~ 510 (531)
T TIGR02347 432 GKAK-LGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIKGIWDNYRVKKQLIQSAT 510 (531)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchhhccCEEcHHHHHHHHHHHH
Confidence 7766 8999999999999999999999999999999986543 57999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHhhccCCC
Q 007313 573 SVAKTFLMSDCVVVEIKEP 591 (608)
Q Consensus 573 e~a~~iL~iD~iI~~~~~~ 591 (608)
++|++|||||++|+.+|+.
T Consensus 511 e~a~~iLrID~ii~~~~~~ 529 (531)
T TIGR02347 511 VIASQLLLVDEVMRAGRSM 529 (531)
T ss_pred HHHHHHHhHHHHHhCcccc
Confidence 9999999999999887764
No 18
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=8.8e-91 Score=776.13 Aligned_cols=455 Identities=25% Similarity=0.406 Sum_probs=418.3
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhcc
Q 007313 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (608)
Q Consensus 66 i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~ 145 (608)
-.+| .++|..+++||..+++++++||||+||+|||++++|+++|||||+||+|+|+++||. |+||+++|++||+
T Consensus 11 ~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd~ 84 (519)
T TIGR02339 11 RTKG--RDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDA 84 (519)
T ss_pred cccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHHH
Confidence 3445 789999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcCCh------
Q 007313 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGNN------ 216 (608)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~~------ 216 (608)
++||||||+++|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++. . .|.++|+|+++++
T Consensus 85 ~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~~ 164 (519)
T TIGR02339 85 EVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEVT 164 (519)
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccchh
Confidence 999999999999999999999999999999999999999999999999999999875 3 7999999998764
Q ss_pred -hHHHHHHHHHHHhhcc---CCc-------EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEE
Q 007313 217 -YEVGNMIAEAMSKVGR---KGV-------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (608)
Q Consensus 217 -~~ls~Li~eAi~~vg~---~g~-------I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll 283 (608)
++|++|+++|+.++++ +|. |.+ .+|++++|+ ++++|++|+++|.+|. |+++++||+|++
T Consensus 165 ~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~~-------m~~~i~n~kIll 236 (519)
T TIGR02339 165 KDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHPG-------MPKRVKNAKIAL 236 (519)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCCC-------CccccCCCcEEE
Confidence 8899999999999985 553 333 799999998 9999999999999873 677899999999
Q ss_pred eecC-------------CCCHHHHHHHHH-----------HHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeec
Q 007313 284 VDKK-------------ITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (608)
Q Consensus 284 ~d~~-------------I~~~~~l~~~le-----------~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~ 339 (608)
++++ |++++++.++++ .+.+.|+||||++++|++.++++|..+ +|++|+
T Consensus 237 l~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------gI~~v~- 309 (519)
T TIGR02339 237 LDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKA------GILAVR- 309 (519)
T ss_pred EeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHC------CCEEEe-
Confidence 9998 678877766655 899999999999999999999999755 456666
Q ss_pred CCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHHh
Q 007313 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (608)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~~ 416 (608)
++++++|+|||++|||++++ ++++++++.||+|++|++. ++++++|++|+++
T Consensus 310 ----~v~~~~L~rIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~---------------- 364 (519)
T TIGR02339 310 ----RVKKSDIEKLARATGAKIVS-----SIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNP---------------- 364 (519)
T ss_pred ----cCCHHHHHHHHHHhCCEEeC-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC----------------
Confidence 67799999999999999999 6888888999999999864 5899999988653
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCC
Q 007313 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (608)
Q Consensus 417 ~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (608)
..|||+|||+|+.+++|.+|+++||++++++++++| +||||||+||+|+.+|+++++...
T Consensus 365 -------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~ 425 (519)
T TIGR02339 365 -------------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIG 425 (519)
T ss_pred -------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCC
Confidence 478999999999999999999999999999999999 999999999999999999987777
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHH
Q 007313 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (608)
Q Consensus 496 ~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~ 572 (608)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 426 ~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~ 504 (519)
T TIGR02339 426 GREQ-LAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPLRVKEQAIKSAT 504 (519)
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceEcHHHHHHHHHHHH
Confidence 7766 89999999999999999999999999999999853 3467999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHhh
Q 007313 573 SVAKTFLMSDCVVV 586 (608)
Q Consensus 573 e~a~~iL~iD~iI~ 586 (608)
|+|++|||+|++|+
T Consensus 505 e~a~~iL~id~ii~ 518 (519)
T TIGR02339 505 EAATMILRIDDVIA 518 (519)
T ss_pred HHHHHHHhHhHHhh
Confidence 99999999999985
No 19
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.8e-90 Score=775.72 Aligned_cols=460 Identities=24% Similarity=0.335 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+++|+.+++||..|+++|++||||+||+|||++++|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 11 ~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 86 (536)
T TIGR02340 11 QDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDREVGDGT 86 (536)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCh
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhc-ccccC--ch-HHHHHHHhhcC------ChhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM-SKEVE--DS-ELADVAAVSAG------NNYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~-s~~v~--~~-~l~~va~ts~~------~~~~ls~ 221 (608)
||++||+++||+++.+++++|+||+.|++||+.|++.+++.|++. ++|++ +. +|.++|+++++ +++.|++
T Consensus 87 Tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~ 166 (536)
T TIGR02340 87 TSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDSDFFSN 166 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhHHHHHH
Confidence 999999999999999999999999999999999999999999974 88987 44 89999999987 5789999
Q ss_pred HHHHHHHhhc---cCCc-------E--EEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC
Q 007313 222 MIAEAMSKVG---RKGV-------V--TLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (608)
Q Consensus 222 Li~eAi~~vg---~~g~-------I--~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~ 289 (608)
++++|+..++ .+|. | ..++|++++|+ ++++|++|+++|.+| +|+++++||+|++++++++
T Consensus 167 l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~-------~m~~~~~n~kIli~~~~L~ 238 (536)
T TIGR02340 167 IVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQ-------QMPKRIKKAKIACLDFNLQ 238 (536)
T ss_pred HHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCC-------CCcceecCCcEEEEecCCC
Confidence 9999999996 3342 2 23699999888 999999999999887 4778999999999999864
Q ss_pred CH-------------HH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 290 NA-------------RD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 290 ~~-------------~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
.. .+ +.+.++.+.+.|++|||++++|++.++++|.++ ++++++ ++
T Consensus 239 ~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~------~I~~i~-----rv 307 (536)
T TIGR02340 239 KQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEA------GAMGVR-----RC 307 (536)
T ss_pred CCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEe-----cC
Confidence 33 21 235678888999999999999999999999987 457766 66
Q ss_pred cchhHHHHHHHhCCeEeeccCCc-cccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHH
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGL-ALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~-~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (608)
++++|+|||++|||+++++..++ ..+++++++||+|++|+ ++++++++|++++++
T Consensus 308 ~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~--------------------- 366 (536)
T TIGR02340 308 KKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR--------------------- 366 (536)
T ss_pred CHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC---------------------
Confidence 78999999999999999975444 23456677899999998 788999999987653
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHH
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (608)
.+|||+|||+|+.+++|++|+++||++++++++++| +||||||+|++|+.+|+++++...+.+|
T Consensus 367 --------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~- 431 (536)
T TIGR02340 367 --------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQ- 431 (536)
T ss_pred --------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCCChhH-
Confidence 489999999999999999999999999999999999 9999999999999999998776666666
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCceeeecCCCcccccccCCcccchHHHHHHHH
Q 007313 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (608)
Q Consensus 501 ~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~-----------~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~ 569 (608)
+++++|++||+.||++||+|||+|+.+++.+|++.| +.++|||+.+|++.||++.|||||+.+|+++|+
T Consensus 432 ~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k~~~l~ 511 (536)
T TIGR02340 432 LAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSKVKSLK 511 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccccchhccceecHHHHHHHHH
Confidence 899999999999999999999999999999997632 347999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHHhhccCC
Q 007313 570 HASSVAKTFLMSDCVVVEIKE 590 (608)
Q Consensus 570 ~A~e~a~~iL~iD~iI~~~~~ 590 (608)
.|+|+|++|||+|++|...|+
T Consensus 512 ~A~e~a~~iL~ID~ii~~~~~ 532 (536)
T TIGR02340 512 FATEAAITILRIDDLIKLNPE 532 (536)
T ss_pred HHHHHHHHHHhhhhhhhcCCC
Confidence 999999999999999988764
No 20
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.2e-90 Score=769.54 Aligned_cols=458 Identities=22% Similarity=0.317 Sum_probs=413.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.++++.|+.+|..|+++|++||||+||||||++++|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 7 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~~GDGT 82 (515)
T cd03338 7 ADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIEAGDGT 82 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhHhcCCc
Confidence 678899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcC------ChhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~ls~L 222 (608)
||++||+++|++++.+++++|+||..|++||++|.+.+++.|+++++|++ +. +|.++|++|++ ++++|++|
T Consensus 83 tt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~l 162 (515)
T cd03338 83 TSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSLLAPI 162 (515)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986 44 89999999998 56889999
Q ss_pred HHHHHHhhccCCc----------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC----
Q 007313 223 IAEAMSKVGRKGV----------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (608)
Q Consensus 223 i~eAi~~vg~~g~----------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I---- 288 (608)
+++|+.++++++. |.++.|++++|+ ++++|++|+++|.+|++ +|+.++||+++++++++
T Consensus 163 i~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~le~~~ 235 (515)
T cd03338 163 AVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFCLSPPK 235 (515)
T ss_pred HHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEeccccccc
Confidence 9999999998763 555799999999 99999999999999752 25567788888877653
Q ss_pred ---------CCH-----------HHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcch
Q 007313 289 ---------TNA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (608)
Q Consensus 289 ---------~~~-----------~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~ 348 (608)
+++ +++.++++++++.|+||||++++|++++++.+..|.+++ .+|+||+ +++++
T Consensus 236 ~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~~~~~ 309 (515)
T cd03338 236 TDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----DIERE 309 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----cCCHH
Confidence 233 345678999999999999999999555555555544443 4789888 77899
Q ss_pred hHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHH
Q 007313 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (608)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (608)
+|+|||++|||++++ ++++++++.||+|++|++ +++.++++.+|.+
T Consensus 310 ~LerIa~~tGa~ii~-----sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~-------------------------- 358 (515)
T cd03338 310 EIEFICKTIGCKPVA-----SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN-------------------------- 358 (515)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhhCCCCceEEEEEECCeEEEEEEecCC--------------------------
Confidence 999999999999999 688999999999999985 3557888887653
Q ss_pred HHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHH
Q 007313 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (608)
Q Consensus 426 l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (608)
++++|||+|||+|+.+++|++|+++||++++++++++| +||||||+|++|+.+|++++.+..+.+| ++++
T Consensus 359 --------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~ 429 (515)
T cd03338 359 --------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVEQ-YCVR 429 (515)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHHH-HHHH
Confidence 24689999999999999999999999999999999999 9999999999999999999877767666 8999
Q ss_pred HHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhch
Q 007313 505 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMS 581 (608)
Q Consensus 505 ~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~i 581 (608)
+|++||+.||++|++|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 430 ~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~I 509 (515)
T cd03338 430 AFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENVVQPLLVSTSAITLATETVRMILKI 509 (515)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCceecHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999864 3568999999999999999999999999999999999999999999
Q ss_pred hHHhh
Q 007313 582 DCVVV 586 (608)
Q Consensus 582 D~iI~ 586 (608)
|++|+
T Consensus 510 D~ii~ 514 (515)
T cd03338 510 DDIVL 514 (515)
T ss_pred chhhc
Confidence 99986
No 21
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.4e-90 Score=769.51 Aligned_cols=456 Identities=23% Similarity=0.339 Sum_probs=414.5
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhc
Q 007313 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (608)
Q Consensus 65 ~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d 144 (608)
++.|| +++++.+++||..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+||+++|++||
T Consensus 17 ~~~~~--~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~ 90 (526)
T cd03339 17 KRLKG--LEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI----AKLLVELSKSQD 90 (526)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH----HHHHHHHHHhhh
Confidence 57888 999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC----ch-HHHHHHHhhcCC----
Q 007313 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (608)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~l~~va~ts~~~---- 215 (608)
+++||||||+++|+++||+++.+++++|+||..|++||++|++.+++.|+++++|++ +. .|.++|+++++.
T Consensus 91 ~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~tsl~sk~~~ 170 (526)
T cd03339 91 DEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPLIQTAMTSLGSKIVS 170 (526)
T ss_pred hhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHHHHHHHHhhcccchh
Confidence 999999999999999999999999999999999999999999999999999999986 23 799999999874
Q ss_pred --hhHHHHHHHHHHHhhccC-------Cc--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 216 --NYEVGNMIAEAMSKVGRK-------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 216 --~~~ls~Li~eAi~~vg~~-------g~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
.+.|++++++|+..+.+. .. |...+|++++|| ++++|++|+++|.+|+|+ +.++||||+++
T Consensus 171 ~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~m~-------~~~~n~kI~ll 242 (526)
T cd03339 171 RCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQMP-------KEVKDAKIAIL 242 (526)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCCCC-------ceecCCCEEEE
Confidence 378999999999988531 12 334699999999 999999999999999763 45678888888
Q ss_pred ecC-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecC
Q 007313 285 DKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (608)
Q Consensus 285 d~~-------------I~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~ 340 (608)
+++ ++++++ +.++++++.+.|+||||++++|++.++++|..| +|.||++
T Consensus 243 ~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~~- 315 (526)
T cd03339 243 TCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQN------GLPAVRW- 315 (526)
T ss_pred EecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHC------CCEEEEe-
Confidence 764 456655 567799999999999999999999999999987 4578885
Q ss_pred CcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---Ec--CCeEEEEcCCCChhHHHHHHHHHHHHHH
Q 007313 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LT--KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (608)
Q Consensus 341 ~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~--~~~~~~i~~~~~~~~i~~ri~~l~~~l~ 415 (608)
+++++|+|||++|||++++ ++++++++.||+|+.|+ ++ +++++++++|+++
T Consensus 316 ----v~~~~LerIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~--------------- 371 (526)
T cd03339 316 ----VGGVEIELIAIATGGRIVP-----RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS--------------- 371 (526)
T ss_pred ----CCHHHHHHHHHHhCCEEec-----chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC---------------
Confidence 4478899999999999999 68999999999999997 33 4688999888753
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcC
Q 007313 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 416 ~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
+.|||+|||+|+.+++|.||+++||++++++++++| +||||||+||+++.+|++++..+
T Consensus 372 --------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 431 (526)
T cd03339 372 --------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKAADKC 431 (526)
T ss_pred --------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHHhccC
Confidence 589999999999999999999999999999999998 99999999999999999998777
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHH
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEH 570 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~ 570 (608)
.+.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++
T Consensus 432 ~~~~~-~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~ 510 (526)
T cd03339 432 SGIEQ-YAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETLISKKQQILL 510 (526)
T ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecHHHHHHHHHH
Confidence 77665 899999999999999999999999999999998433 4579999999999999999999999999999999
Q ss_pred HHHHHHHHhchhHHhh
Q 007313 571 ASSVAKTFLMSDCVVV 586 (608)
Q Consensus 571 A~e~a~~iL~iD~iI~ 586 (608)
|+++|++|||+|++|.
T Consensus 511 A~e~a~~iL~iD~ii~ 526 (526)
T cd03339 511 ATQVVKMILKIDDVIV 526 (526)
T ss_pred HHHHHHHHhhhceecC
Confidence 9999999999999874
No 22
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.6e-89 Score=766.55 Aligned_cols=456 Identities=21% Similarity=0.324 Sum_probs=418.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..++.+|..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ |+||+++|++|++++||||
T Consensus 15 ~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (522)
T cd03340 15 KGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAEVGDGT 90 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhHhCCCh
Confidence 779999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc------h-HHHHHHHhhcC------ChhH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED------S-ELADVAAVSAG------NNYE 218 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~------~-~l~~va~ts~~------~~~~ 218 (608)
||+|+|+++||+++.+++++|+||+.|++||++|.+.+++.|+++++|++. . .|.++|+++++ ++++
T Consensus 91 tt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ 170 (522)
T cd03340 91 TSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEF 170 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHH
Confidence 999999999999999999999999999999999999999999999998864 3 69999999976 5789
Q ss_pred HHHHHHHHHHhhccCC---c--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC------
Q 007313 219 VGNMIAEAMSKVGRKG---V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (608)
Q Consensus 219 ls~Li~eAi~~vg~~g---~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~------ 287 (608)
|++++++|+.++++++ . |...+|++++|+ ++++|++|+++|.+|+|.+ +++.++||+|++++++
T Consensus 171 l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~~ 245 (522)
T cd03340 171 FAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFEQ----QPKKFKNPKILLLNVELELKAE 245 (522)
T ss_pred HHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCcccccc----CCccccCCeEEEEeCCCCCCcc
Confidence 9999999999998765 2 233589999999 8999999999999998744 5667999999999987
Q ss_pred -------CCCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchh
Q 007313 288 -------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (608)
Q Consensus 288 -------I~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~ 349 (608)
++++++ +.+.++.+.+.|+++|++++.|++.++++|..+ +|++++ ++++++
T Consensus 246 ~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~------~I~~~~-----~v~~~~ 314 (522)
T cd03340 246 KDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADR------DIFCAG-----RVPEED 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHC------CcEEEE-----eCCHHH
Confidence 345444 456788889999999999999999999999887 456665 567899
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 007313 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (608)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (608)
|+|||++|||++++ ++++++++.||+|++|+ ++++++++|.+|..+
T Consensus 315 l~rIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~-------------------------- 363 (522)
T cd03340 315 LKRVAQATGGSIQT-----TVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA-------------------------- 363 (522)
T ss_pred HHHHHHHHCCEEee-----ccccCCccccccceEEEEEEECCEEEEEEECCCCC--------------------------
Confidence 99999999999999 68899999999999997 678899999988653
Q ss_pred HHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHH
Q 007313 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (608)
Q Consensus 427 ~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (608)
..|||++||+|+.+++|.+|+++||++++++++++| +||||||+|++++.+|++++++..+++| +++++
T Consensus 364 ---------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~~-~~~~~ 433 (522)
T cd03340 364 ---------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LVINA 433 (522)
T ss_pred ---------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHHH
Confidence 489999999999999999999999999999999998 9999999999999999999877777666 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C-CceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhch
Q 007313 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMS 581 (608)
Q Consensus 506 ~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~-~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~i 581 (608)
|++||+.||++|++|||+|+.+++.+|+..| + .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||++
T Consensus 434 fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~i~~A~e~a~~iL~i 513 (522)
T cd03340 434 FAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLILSV 513 (522)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998743 3 57999999999999999999999999999999999999999999
Q ss_pred hHHhhcc
Q 007313 582 DCVVVEI 588 (608)
Q Consensus 582 D~iI~~~ 588 (608)
|++|..+
T Consensus 514 d~ii~~~ 520 (522)
T cd03340 514 DETIKNP 520 (522)
T ss_pred hhheeCC
Confidence 9999774
No 23
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.1e-89 Score=763.69 Aligned_cols=455 Identities=21% Similarity=0.300 Sum_probs=415.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
++++..|+.+|..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++||+++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~~~GDGT 90 (525)
T TIGR02344 15 RKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (525)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhhhccCCc
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcCC------hhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~ls~L 222 (608)
||+|+|+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++. . .|.++|+++++. ++.|+++
T Consensus 91 tt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l 170 (525)
T TIGR02344 91 TSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDL 170 (525)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999873 3 799999887653 6899999
Q ss_pred HHHHHHhhccCC-----------cEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC
Q 007313 223 IAEAMSKVGRKG-----------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (608)
Q Consensus 223 i~eAi~~vg~~g-----------~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~ 289 (608)
+++|+..+++++ .|++ .+|++++|| ++++|++|++++.++ +|+++++||+|++++++++
T Consensus 171 ~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (525)
T TIGR02344 171 ALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHP-------KMRRYIENPRIVLLDCPLE 242 (525)
T ss_pred HHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCC-------CCccccCCCCEEEEecccc
Confidence 999999998653 1333 579999998 899999999997764 4778899999999999864
Q ss_pred C-------------HHHHHHH-----------HHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 290 N-------------ARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 290 ~-------------~~~l~~~-----------le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
. ++++.++ ++++.+.|++|||+++.|++.++++|..+ +|+|++ ++
T Consensus 243 ~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~------~I~av~-----~v 311 (525)
T TIGR02344 243 YKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKA------NISAIR-----RV 311 (525)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC------CceEEe-----cC
Confidence 4 4565554 45888999999999999999999988775 567765 78
Q ss_pred cchhHHHHHHHhCCeEeeccCCccccCCCCCCCcc-eeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHH
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (608)
++++|+|||++|||++++ ++++++++.||+ |+.|++ +++++++|++|+++
T Consensus 312 ~~~~LerIa~~tGa~ii~-----~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 365 (525)
T TIGR02344 312 RKTDNNRIARACGATIVN-----RPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDP--------------------- 365 (525)
T ss_pred CHHHHHHHHHHhCCeEec-----chhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCC---------------------
Confidence 899999999999999999 688999999999 998875 67889999988764
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHH
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (608)
..|||+|||+|+.+++|.||+++||+++++++++++ +||||||+||+|+.+|++++.+..+.+|
T Consensus 366 --------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~- 430 (525)
T TIGR02344 366 --------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQ- 430 (525)
T ss_pred --------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHH-
Confidence 489999999999999999999999999999999996 9999999999999999999877777776
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHH
Q 007313 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAK 576 (608)
Q Consensus 501 ~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~ 576 (608)
+++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|+
T Consensus 431 ~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a~ 510 (525)
T TIGR02344 431 WPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKTAIESAC 510 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccceecHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998643 4579999999999999999999999999999999999999
Q ss_pred HHhchhHHhhccCC
Q 007313 577 TFLMSDCVVVEIKE 590 (608)
Q Consensus 577 ~iL~iD~iI~~~~~ 590 (608)
+|||+|++|...|+
T Consensus 511 ~iL~id~ii~~~~~ 524 (525)
T TIGR02344 511 MLLRIDDIVSGVKK 524 (525)
T ss_pred HHHhhhHHhhcCCC
Confidence 99999999988663
No 24
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=5.9e-89 Score=761.25 Aligned_cols=454 Identities=21% Similarity=0.315 Sum_probs=414.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..|+.+|.+|+++|++||||+||+|||+++.| ++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~~~GDGT 91 (522)
T TIGR02345 17 KGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDSEVGDGT 91 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHHHhCCCc
Confidence 789999999999999999999999999999999999 99999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-----ch-HHHHHHHhhcC------ChhHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG------NNYEV 219 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~------~~~~l 219 (608)
||+|||+++||+++.+++++|+||+.|++||++|.+.+++.|+++++|++ +. +|.++|+|+++ ++++|
T Consensus 92 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l 171 (522)
T TIGR02345 92 TSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFF 171 (522)
T ss_pred hhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHH
Confidence 99999999999999999999999999999999999999999999999987 33 79999999977 57999
Q ss_pred HHHHHHHHHhhccCC-------cEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC---
Q 007313 220 GNMIAEAMSKVGRKG-------VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (608)
Q Consensus 220 s~Li~eAi~~vg~~g-------~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~--- 289 (608)
++++++|+.++++++ +++ .+|++++|+ ++++|++|+++|.+|+|.+ |+++++||+|+++|++++
T Consensus 172 ~~l~~~A~~~v~~~~~~~~~I~i~k-i~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~Le~~~ 245 (522)
T TIGR02345 172 SKMIVDAVLQLDIDDLDLKLIGVKK-VQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVELELKA 245 (522)
T ss_pred HHHHHHHHHHHhhccCChhHheEEe-ecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecCcccCc
Confidence 999999999998752 334 489999999 7999999999999998754 667899999999998753
Q ss_pred ----------CHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcch
Q 007313 290 ----------NARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (608)
Q Consensus 290 ----------~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~ 348 (608)
++++ +.+.++.+.+.|+++|+++++|++.++++|..+ +|++++ ++..+
T Consensus 246 ~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~------~I~~~~-----~v~~~ 314 (522)
T TIGR02345 246 EKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADH------NIFCAG-----RVSDE 314 (522)
T ss_pred cccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHC------CcEEEe-----cCCHH
Confidence 3333 245577788899999999999999999999886 456665 66689
Q ss_pred hHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHH
Q 007313 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (608)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (608)
++++|+++|||++++ ++++++++.||+|+.|+. +++++++|.+|+++
T Consensus 315 dl~ria~~tga~ii~-----~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~------------------------- 364 (522)
T TIGR02345 315 DLKRVVKACGGSIQS-----TTSDLEADVLGTCALFEERQIGSERYNYFTGCPHA------------------------- 364 (522)
T ss_pred HHHHHHHHhCCeEEc-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC-------------------------
Confidence 999999999999999 688999999999999974 56788999887543
Q ss_pred HHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHH
Q 007313 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (608)
Q Consensus 426 l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (608)
.+|||+|||+|+.+++|++|+++||+++++++++++ +||||||+|++++.+|++++++..+.+| ++++
T Consensus 365 ----------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~-~~i~ 433 (522)
T TIGR02345 365 ----------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQQ-LIIE 433 (522)
T ss_pred ----------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHHH-HHHH
Confidence 489999999999999999999999999999999985 9999999999999999998877777766 8999
Q ss_pred HHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhch
Q 007313 505 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMS 581 (608)
Q Consensus 505 ~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~i 581 (608)
+|++||+.||++||+|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||++
T Consensus 434 ~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~i 513 (522)
T TIGR02345 434 AFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEPLLVKKNALKAAFEAACTILSI 513 (522)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999874 3457999999999999999999999999999999999999999999
Q ss_pred hHHhhcc
Q 007313 582 DCVVVEI 588 (608)
Q Consensus 582 D~iI~~~ 588 (608)
|++|+.+
T Consensus 514 d~ii~~~ 520 (522)
T TIGR02345 514 DETIMNP 520 (522)
T ss_pred HHHHhCC
Confidence 9999773
No 25
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.5e-89 Score=761.37 Aligned_cols=459 Identities=21% Similarity=0.317 Sum_probs=410.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..|+.+|..|+++|++||||+||+|||+++.|+++|||||+||+++|+++||+ ++|++++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~~~GDGT 83 (517)
T TIGR02342 8 TDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDIEAGDGT 83 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHHHhCCCc
Confidence 678899999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC------hhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~------~~~ls~L 222 (608)
||+++|+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. .|.++|+||++. .++|+++
T Consensus 84 tt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l 163 (517)
T TIGR02342 84 TSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYSSLLAPL 163 (517)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 799999999864 4778999
Q ss_pred HHHHHHhhccC---Cc-----EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC----
Q 007313 223 IAEAMSKVGRK---GV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (608)
Q Consensus 223 i~eAi~~vg~~---g~-----I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I---- 288 (608)
+++|+..++++ +. |.+ ..|++++|+ ++++|++|+++|.++ .+|++.++||+|+++++++
T Consensus 164 ~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~------~~mpk~i~n~kI~ll~~~Le~~~ 236 (517)
T TIGR02342 164 AVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRS------AGGPTRIEKAKIGLIQFQISPPK 236 (517)
T ss_pred HHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEecccccc------CCCCccccCCcEEEEecCCCCCc
Confidence 99999999762 32 222 489999999 899999999999874 2467778999999998764
Q ss_pred ---------CCH-----------HHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcch
Q 007313 289 ---------TNA-----------RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (608)
Q Consensus 289 ---------~~~-----------~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~ 348 (608)
+++ +++.++++++.+.|+|||||+++|++++++.+..|.+.+ .+|+||+ +++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~-----~v~~~ 310 (517)
T TIGR02342 237 TDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK-----DIERE 310 (517)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe-----cCCHH
Confidence 232 235678899999999999999999555555555544444 4789988 67799
Q ss_pred hHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE-E--cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHH
Q 007313 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV-L--TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (608)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~-i--~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (608)
+|+|||++|||++++ +++++++++||+|+.|+ + +++.++++.++.+
T Consensus 311 ~LerIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~-------------------------- 359 (517)
T TIGR02342 311 EVEFICKTIGCKPIA-----SIDHFTADKLGSAELVEEVTTDGGKIIKITGIQN-------------------------- 359 (517)
T ss_pred HHHHHHHHHCCEEEc-----chhhcCcccCcCCceEEEEEECCeEEEEEEccCC--------------------------
Confidence 999999999999999 68889999999999998 3 4557777877654
Q ss_pred HHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHH
Q 007313 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (608)
Q Consensus 426 l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (608)
++++|||+|||+|+.+++|.+|+++||+++++++++++ +||||||+||+|+.+|++++++..+.+| ++++
T Consensus 360 --------~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i~ 430 (517)
T TIGR02342 360 --------AGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVES-YCVR 430 (517)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHHH-HHHH
Confidence 24799999999999999999999999999999999985 9999999999999999999877777776 8999
Q ss_pred HHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhch
Q 007313 505 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMS 581 (608)
Q Consensus 505 ~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~i 581 (608)
+|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|+++||++.|||||+.||+++|++|+++|++|||+
T Consensus 431 ~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~A~e~a~~iL~i 510 (517)
T TIGR02342 431 AFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEVLQPLLVTTSAVTLASETVRMILKI 510 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999998743 568999999999999999999999999999999999999999999
Q ss_pred hHHhhc
Q 007313 582 DCVVVE 587 (608)
Q Consensus 582 D~iI~~ 587 (608)
|++|..
T Consensus 511 D~ii~~ 516 (517)
T TIGR02342 511 DDIVFT 516 (517)
T ss_pred cceeec
Confidence 999875
No 26
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=1.4e-88 Score=759.60 Aligned_cols=456 Identities=21% Similarity=0.337 Sum_probs=415.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC-----CCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK-----YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 146 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~-----~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~ 146 (608)
+++|..+++||..|+++|+|||||+||+|||+++ +|+++|||||+||+|+|+++||. |+||+++|++||++
T Consensus 21 ~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~----akll~~~a~~qd~~ 96 (533)
T PTZ00212 21 ETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPA----AKILVDISKTQDEE 96 (533)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHhhhhh
Confidence 8899999999999999999999999999999998 69999999999999999999997 99999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcCC-----
Q 007313 147 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN----- 215 (608)
Q Consensus 147 ~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~----- 215 (608)
+||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|++. . +|.++|+|+++.
T Consensus 97 ~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk~~~~ 176 (533)
T PTZ00212 97 VGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSKLLTV 176 (533)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhcccccch
Confidence 99999999999999999999999999999999999999999999999999999864 3 799999987653
Q ss_pred -hhHHHHHHHHHHHhhccC---C--cEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC-
Q 007313 216 -NYEVGNMIAEAMSKVGRK---G--VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (608)
Q Consensus 216 -~~~ls~Li~eAi~~vg~~---g--~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I- 288 (608)
.+.|++++++|+..+.+. . .|...+|++++|+ ++++|+++++++.+ .|+++++||+|+++|+++
T Consensus 177 ~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~--------~~~~~i~n~kIll~~~~Le 247 (533)
T PTZ00212 177 EKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGV--------GQPKRLENCKILVANTPMD 247 (533)
T ss_pred hHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCC--------CCCccccCCcEEEEeCCCC
Confidence 478999999999998542 1 2444699999999 89999999998643 257789999999999986
Q ss_pred -------------CCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCC
Q 007313 289 -------------TNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGE 344 (608)
Q Consensus 289 -------------~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~ 344 (608)
++++++ .+.++.+.+.|++++++++.|++.++++|.++ +|+||+ +
T Consensus 248 ~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~------~I~avr-----~ 316 (533)
T PTZ00212 248 TDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA------GIMAIE-----H 316 (533)
T ss_pred CCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CCEEEe-----c
Confidence 566554 23477888999999999999999999999877 568887 4
Q ss_pred CcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHH
Q 007313 345 RKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (608)
Q Consensus 345 ~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (608)
+++.+++|||++|||++++ ++++++++.||+|++|+ ++++++++|.+|..
T Consensus 317 v~~~~l~rIa~~tGa~iis-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---------------------- 369 (533)
T PTZ00212 317 ADFDGMERLAAALGAEIVS-----TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK---------------------- 369 (533)
T ss_pred CCHHHHHHHHHHhCCEEee-----cCCCCCHHHccCCceEEEEEECCeEEEEEEccCC----------------------
Confidence 5578999999999999999 68899999999999998 77889999988754
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHH
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (608)
+++|||+|||+|+.+++|+||+++||++++++++++| +||||||+|++|+.+|++++++..+.+|
T Consensus 370 -------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~~~~- 435 (533)
T PTZ00212 370 -------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEGKKS- 435 (533)
T ss_pred -------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCCHHH-
Confidence 4689999999999999999999999999999999998 9999999999999999999877777766
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 007313 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKT 577 (608)
Q Consensus 501 ~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~ 577 (608)
+++++|++||+.||++||+|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++
T Consensus 436 ~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~~ 515 (533)
T PTZ00212 436 LAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVKLSQLCSATEAAEM 515 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999853 356899999999999999999999999999999999999999
Q ss_pred HhchhHHhhccCCCC
Q 007313 578 FLMSDCVVVEIKEPE 592 (608)
Q Consensus 578 iL~iD~iI~~~~~~~ 592 (608)
|||+|++|...|+++
T Consensus 516 iL~id~ii~~~~~~~ 530 (533)
T PTZ00212 516 ILRVDDIIRCAPRQR 530 (533)
T ss_pred HHhhhHhhhcCCccc
Confidence 999999999876543
No 27
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-88 Score=755.93 Aligned_cols=454 Identities=23% Similarity=0.336 Sum_probs=412.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCC
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GD 149 (608)
+++|+.++.||..|+++|+|||||+||+|||+++ +|+++|||||+||+|+|+++||. |+||+++|++||+++||
T Consensus 12 ~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GD 87 (517)
T cd03336 12 ETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 87 (517)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHHhHhCC
Confidence 7899999999999999999999999999999998 59999999999999999999997 99999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-----ch-HHHHHHHhhcC------Chh
Q 007313 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG------NNY 217 (608)
Q Consensus 150 GTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~------~~~ 217 (608)
||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +. +|.++|+|+++ +++
T Consensus 88 GTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~ 167 (517)
T cd03336 88 GTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKE 167 (517)
T ss_pred ChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHH
Confidence 9999999999999999999999999999999999999999999999999984 12 78999997754 368
Q ss_pred HHHHHHHHHHHhhccC---Cc--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC---
Q 007313 218 EVGNMIAEAMSKVGRK---GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT--- 289 (608)
Q Consensus 218 ~ls~Li~eAi~~vg~~---g~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~--- 289 (608)
+|++|+++|+.++++. .. |...+|++++|+ ++++|+++++++.++ |+++++||+|+++|++++
T Consensus 168 ~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~~--------~~~~~~n~kIli~~~~le~~~ 238 (517)
T cd03336 168 HFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTPMDTDK 238 (517)
T ss_pred HHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCCC--------CCCeeccccEEEEecCCCccc
Confidence 9999999999999632 12 334589999999 899999999986432 577899999999999754
Q ss_pred -----------CHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcc
Q 007313 290 -----------NARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (608)
Q Consensus 290 -----------~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~ 347 (608)
+++++ .+.++.+.+.|++++++++.|++.++++|..+ +|++|++|+ +
T Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~------~I~av~~v~-----~ 307 (517)
T cd03336 239 IKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA------GIMAIEHAD-----F 307 (517)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CcEEEecCC-----H
Confidence 55544 33578889999999999999999999998876 679999776 5
Q ss_pred hhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHH
Q 007313 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (608)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (608)
.+|+|||++|||++++ ++++++++.||+|+.|+ ++++++++|.+|++
T Consensus 308 ~~L~rIa~~tGa~ii~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 357 (517)
T cd03336 308 DGVERLALVTGGEIAS-----TFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAA------------------------- 357 (517)
T ss_pred HHHHHHHHHhCCEEec-----ccCCCCcccccccceEEEEEECCeEEEEEEccCC-------------------------
Confidence 6799999999999999 68999999999999996 45788999998864
Q ss_pred HHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHH
Q 007313 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (608)
Q Consensus 425 ~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (608)
++.|||+|||+|+.+++|.+|+++||++++++++++| +||||||+|++|+.+|++++++..+++| +++
T Consensus 358 ----------~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 426 (517)
T cd03336 358 ----------GEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKKS-LAI 426 (517)
T ss_pred ----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHHH-HHH
Confidence 3689999999999999999999999999999999998 9999999999999999999887777777 899
Q ss_pred HHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhc
Q 007313 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (608)
Q Consensus 504 ~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~ 580 (608)
++|++||+.||++||+|||+|+.+++.+|+.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 427 ~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 506 (517)
T cd03336 427 EAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVKRQVLLSASEAAEMILR 506 (517)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999864 356799999999999999999999999999999999999999999
Q ss_pred hhHHhhccCC
Q 007313 581 SDCVVVEIKE 590 (608)
Q Consensus 581 iD~iI~~~~~ 590 (608)
+|++|+.+|+
T Consensus 507 id~ii~~~~~ 516 (517)
T cd03336 507 VDDIIKCAPR 516 (517)
T ss_pred HhHHhhcCCC
Confidence 9999998763
No 28
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1e-88 Score=760.16 Aligned_cols=451 Identities=23% Similarity=0.363 Sum_probs=410.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.++|..+++||..|+++|++||||+||+|||+++.|+++|||||+||+|+|+++||+ |+||+++|++||+++||||
T Consensus 26 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~----akll~~~a~~qd~~~GDGT 101 (532)
T TIGR02343 26 LEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI----AKLMVELSKSQDDEIGDGT 101 (532)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH----HHHHHHHHHHHHHHhcCCc
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc----h-HHHHHHHhhcCC------hhHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN------NYEVG 220 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~------~~~ls 220 (608)
||+++|+++||+++.+++++|+||+.|++||+.|++.+++.|+++++|++. . .|.++|+++++. .+.|+
T Consensus 102 ttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~ls 181 (532)
T TIGR02343 102 TGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKEPLIQAAKTSLGSKIVSKCHRRFA 181 (532)
T ss_pred ccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHHHHHHHHHHhhccchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999998753 3 799999998764 47899
Q ss_pred HHHHHHHHhhccC--C-----c--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC----
Q 007313 221 NMIAEAMSKVGRK--G-----V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK---- 287 (608)
Q Consensus 221 ~Li~eAi~~vg~~--g-----~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~---- 287 (608)
+++++|+..+... + . |...+|++++|+ ++++|++|+++|.+|+| ++.++||||++++++
T Consensus 182 ~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~m-------~~~~~n~kI~l~~~~le~~ 253 (532)
T TIGR02343 182 EIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQM-------PKEVKDAKIAILTCPFEPP 253 (532)
T ss_pred HHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCCC-------CeeecCCcEEEEEeecccc
Confidence 9999999988531 1 1 334699999999 99999999999999875 456778999888864
Q ss_pred ---------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcc
Q 007313 288 ---------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (608)
Q Consensus 288 ---------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~ 347 (608)
+++++++ .++++++.+.|+||||++++|++.++++|..|+ +.+|++ +++
T Consensus 254 ~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~------i~~v~~-----~~~ 322 (532)
T TIGR02343 254 KPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQND------LPAVRW-----VGG 322 (532)
T ss_pred ccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCC------cEEEEc-----CCH
Confidence 4666655 677999999999999999999999999999984 567774 447
Q ss_pred hhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcC--CeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHH
Q 007313 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTK--DTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (608)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~--~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e 422 (608)
.+|+|||++|||++++ ++++++++.||+|++|+ ++. ++++++.+|+++
T Consensus 323 ~~l~~Ia~~tGa~~i~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~---------------------- 375 (532)
T TIGR02343 323 HELELIAIATGGRIVP-----RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNS---------------------- 375 (532)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCHhHCcccceEEEEEecCCcceEEEEECCCCC----------------------
Confidence 7899999999999999 68999999999999997 333 578999988764
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHH
Q 007313 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (608)
Q Consensus 423 ~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (608)
.+|||+|||+|+.+++|.||+++||+++++++++++ +||||||+|++|+.+|++++.++.+.+| +
T Consensus 376 -------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~ 441 (532)
T TIGR02343 376 -------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQEADKYSGVEQ-Y 441 (532)
T ss_pred -------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhccCCcHHH-H
Confidence 489999999999999999999999999999999996 9999999999999999999877777776 8
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 007313 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKT 577 (608)
Q Consensus 502 ~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~ 577 (608)
++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++
T Consensus 442 ~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~Dp~~vk~~al~~A~e~a~~ 521 (532)
T TIGR02343 442 AIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFETLIGKKQQIQLATQLVRM 521 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCeecHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998532 45799999999999999999999999999999999999999
Q ss_pred HhchhHHhh
Q 007313 578 FLMSDCVVV 586 (608)
Q Consensus 578 iL~iD~iI~ 586 (608)
||++|++|.
T Consensus 522 iL~id~ii~ 530 (532)
T TIGR02343 522 ILKIDDVIS 530 (532)
T ss_pred HHhHhhhcc
Confidence 999999985
No 29
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3.9e-89 Score=763.36 Aligned_cols=460 Identities=23% Similarity=0.314 Sum_probs=412.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
++++..|+++|..|+++|++||||+||||||++++|+++|||||+||+|+|+++||+ |+|++++|++||+++||||
T Consensus 17 ~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~~GDGT 92 (531)
T TIGR02346 17 EEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENEIGDGT 92 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCCh
Confidence 459999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccc-ccCc---h-HHHHHHHhhcC-----ChhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSK-EVED---S-ELADVAAVSAG-----NNYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~-~v~~---~-~l~~va~ts~~-----~~~~ls~ 221 (608)
||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++++ ++++ . +|.++|+++++ ++++|++
T Consensus 93 Tt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~ 172 (531)
T TIGR02346 93 NLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNEDFLAQ 172 (531)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchHHHHHH
Confidence 99999999999999999999999999999999999999999999986 7744 3 78999888764 4899999
Q ss_pred HHHHHHHhhccCC--cE-----E--EecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC----
Q 007313 222 MIAEAMSKVGRKG--VV-----T--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (608)
Q Consensus 222 Li~eAi~~vg~~g--~I-----~--v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I---- 288 (608)
|+++|+.++++++ .+ . ...|++++|+ ++++|++|++++. .+++.++||||+++++++
T Consensus 173 l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~---------~~~k~i~n~kI~l~~~~l~~~~ 242 (531)
T TIGR02346 173 LVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAE---------GSVKRVKNAKVAVFSCPLDTAT 242 (531)
T ss_pred HHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCC---------CCceeccCCCEEEEecCcCCCc
Confidence 9999999998764 32 2 2489999998 9999999999842 145678899999998763
Q ss_pred ---------CCHH-----------HHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcch
Q 007313 289 ---------TNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (608)
Q Consensus 289 ---------~~~~-----------~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~ 348 (608)
++++ ++.++++++.+.|+||||++++|++.++++|..+ +|+||++|++ .
T Consensus 243 ~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~------~I~av~~~~~-----~ 311 (531)
T TIGR02346 243 TETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKY------NIMVLKIPSK-----F 311 (531)
T ss_pred ccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHC------CcEEEecCCH-----H
Confidence 3433 3467799999999999999999999999988754 6899998875 5
Q ss_pred hHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHH
Q 007313 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREK 425 (608)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~ 425 (608)
+|+|||++|||++++ +++++++++||+|++|++ +++++.++.++..
T Consensus 312 ~l~~Ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~-------------------------- 360 (531)
T TIGR02346 312 ELRRLCKTVGATPLA-----RLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG-------------------------- 360 (531)
T ss_pred HHHHHHHHHCCEEec-----ccccCCHhHccccceEEEEEECCEEEEEEEccCC--------------------------
Confidence 799999999999998 688899999999999975 4678888876542
Q ss_pred HHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHH
Q 007313 426 LNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGAD 504 (608)
Q Consensus 426 l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~ 504 (608)
.+++|||+|||+|+.+++|++|+++||++++++++++| +||||||+||+|+.+|++++++..+.+| ++++
T Consensus 361 --------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~-~~~~ 431 (531)
T TIGR02346 361 --------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQ-YAIK 431 (531)
T ss_pred --------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHH-HHHH
Confidence 25799999999999999999999999999999999999 9999999999999999999877777666 8999
Q ss_pred HHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCc--ccccccCCcccchHHHHHHHHHHHHHHHHHh
Q 007313 505 IVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGN--YEDLMAAGIIDPTKVVRCCLEHASSVAKTFL 579 (608)
Q Consensus 505 ~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~--i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL 579 (608)
+|++||+.||++||+|||+|+.+++.+|+.. ++.++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++||
T Consensus 432 ~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 511 (531)
T TIGR02346 432 KFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEAAVTVL 511 (531)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865 3567999999999 5999999999999999999999999999999
Q ss_pred chhHHhhccCCCCCCCC
Q 007313 580 MSDCVVVEIKEPEPAMP 596 (608)
Q Consensus 580 ~iD~iI~~~~~~~~~~~ 596 (608)
|+|++|...|...++.|
T Consensus 512 ~id~ii~~~~~~~~~~~ 528 (531)
T TIGR02346 512 RVDQIIMAKPAGGPKPP 528 (531)
T ss_pred hhhHhhccCCCCCCCCC
Confidence 99999998876666533
No 30
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1e-87 Score=744.30 Aligned_cols=434 Identities=22% Similarity=0.326 Sum_probs=400.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
++++..|+.++.+|++++++||||+||+|||+++.|+++|||||+||+++|+++||. |+||+++|++|++++||||
T Consensus 15 ~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~~~GDGT 90 (480)
T cd03337 15 RKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGT 90 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHHHhCCCc
Confidence 789999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcC------ChhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAG------NNYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~------~~~~ls~L 222 (608)
||++||+++||+++.+++++|+||..|++||+.|.+.+++.|+++++|++ +. .|.++++++++ +++.|+++
T Consensus 91 tt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~l 170 (480)
T cd03337 91 TSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNL 170 (480)
T ss_pred chhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 44 79999999987 56899999
Q ss_pred HHHHHHhhccC--C---------cEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC
Q 007313 223 IAEAMSKVGRK--G---------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT 289 (608)
Q Consensus 223 i~eAi~~vg~~--g---------~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~ 289 (608)
+++|+..++++ + .|++ .+|++++|+ ++++|++|++++.+| .|+++++||+|++++++++
T Consensus 171 v~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le 242 (480)
T cd03337 171 ALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPLE 242 (480)
T ss_pred HHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCC-------CCCcEecCCCEEEEecCcc
Confidence 99999999864 2 1333 579999998 999999999998876 4788899999999999987
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCcc
Q 007313 290 NARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLA 369 (608)
Q Consensus 290 ~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~ 369 (608)
. |||++++|++.++++|.+| +|++|+ ++++++|+|||++|||++++ +
T Consensus 243 ~-----------------lvi~~k~I~d~al~~L~~~------~I~~v~-----~v~~~~L~rIa~~tGa~ii~-----~ 289 (480)
T cd03337 243 Y-----------------LVITEKGVSDLAQHYLVKA------GITALR-----RVRKTDNNRIARACGATIVN-----R 289 (480)
T ss_pred e-----------------EEEeCCCccHHHHHHHHHC------CcEEEE-----eCCHHHHHHHHHHHCCEEec-----c
Confidence 6 9999999999999999987 568887 57789999999999999999 6
Q ss_pred ccCCCCCCCcce-eEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCC
Q 007313 370 LDKVGKEVLGNA-SKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQ 445 (608)
Q Consensus 370 l~~~~~~~lG~~-~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~ 445 (608)
+++++++.||+| +.++ +++++++++++|+++ +.|||+|||+
T Consensus 290 ~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~TIllrG~ 334 (480)
T cd03337 290 PEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACTILLRGA 334 (480)
T ss_pred hhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEEEEEECC
Confidence 888999999995 4443 256788999988753 5899999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCC
Q 007313 446 TETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVN 524 (608)
Q Consensus 446 t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d 524 (608)
|+.+++|.||+++||+++++++++++ +||||||+||+|+.+|++++++.++.+| +++++|++||+.||++||+|||+|
T Consensus 335 t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~La~NaG~d 413 (480)
T cd03337 335 SKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQ-WPYKAVASALEVIPRTLAQNCGAN 413 (480)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999996 9999999999999999998887777777 899999999999999999999999
Q ss_pred hHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007313 525 GSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 586 (608)
Q Consensus 525 ~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 586 (608)
+.+++.+|++.| +.++|+|+.+|++.||++.|||||+.+|+++|++|+|+|++|||+|++|.
T Consensus 414 ~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 414 VIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred HHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 999999998743 45799999999999999999999999999999999999999999999985
No 31
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1e-86 Score=741.98 Aligned_cols=454 Identities=24% Similarity=0.361 Sum_probs=410.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCC
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GD 149 (608)
.+++..+++|+.+|+++|+|||||+||+|||+++. |+++|||||+||+++|+++||. |+|++++|++||+++||
T Consensus 13 ~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~----akll~~~a~~qd~~~GD 88 (519)
T TIGR02341 13 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPA----AKVLVDMSKVQDDEVGD 88 (519)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHhHhhhCC
Confidence 78999999999999999999999999999999985 9999999999999999999997 99999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcCC------hh
Q 007313 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAGN------NY 217 (608)
Q Consensus 150 GTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~~------~~ 217 (608)
||||+|||+++||+++.+++++|+||+.|++||+.|.+.+++.|+++++|+++ . +|.++|+|+++. .+
T Consensus 89 GTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~~~~~~ 168 (519)
T TIGR02341 89 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKILSQHKD 168 (519)
T ss_pred chhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999853 2 789999988764 47
Q ss_pred HHHHHHHHHHHhhccC---CcEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCC--
Q 007313 218 EVGNMIAEAMSKVGRK---GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN-- 290 (608)
Q Consensus 218 ~ls~Li~eAi~~vg~~---g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~-- 290 (608)
.|++++++|+..+... ..|.+ .+|++++|+ ++++|+++++.+.+ .++++++||+|+++|++++.
T Consensus 169 ~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~--------~~~~~~~n~~Ili~~~~Le~~~ 239 (519)
T TIGR02341 169 HFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGV--------NQPKRIENAKILIANTPMDTDK 239 (519)
T ss_pred HHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCC--------CCceeeccccEEEEecCCCCCc
Confidence 8999999999998432 12444 489999999 89999999998643 25678999999999997642
Q ss_pred ------------HHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcc
Q 007313 291 ------------ARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (608)
Q Consensus 291 ------------~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~ 347 (608)
++++ .+.++.+.+.|++++++++.|++.++++|..+ +|++|++|+ +
T Consensus 240 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~------~I~~v~~~~-----~ 308 (519)
T TIGR02341 240 VKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADA------GVMAIEHAD-----F 308 (519)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHC------CcEEEecCC-----H
Confidence 3333 23477888999999999999999999988776 679999776 5
Q ss_pred hhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHH
Q 007313 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (608)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (608)
.+|+|||++|||++++ +++++++++||+|+.|+ +++++++++.+|.+
T Consensus 309 ~~l~~ia~~tGa~ii~-----~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 358 (519)
T TIGR02341 309 EGIERLALVTGGEIVS-----TFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKL------------------------- 358 (519)
T ss_pred HHHHHHHHHhCCEEec-----ccccCCccccccCceEEEEEECCEEEEEEEcCCC-------------------------
Confidence 6899999999999999 68899999999999886 46778999998864
Q ss_pred HHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHH
Q 007313 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (608)
Q Consensus 425 ~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (608)
+++|||+|||+|+.+++|.+|+++||+++++++++++ +||||||+|++|+.+|++++++..+.+| +++
T Consensus 359 ----------~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~-~~i 427 (519)
T TIGR02341 359 ----------GEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKEA-LAV 427 (519)
T ss_pred ----------CCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChHH-HHH
Confidence 3689999999999999999999999999999999996 9999999999999999998877777776 899
Q ss_pred HHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhc
Q 007313 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (608)
Q Consensus 504 ~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~ 580 (608)
++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 428 ~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 507 (519)
T TIGR02341 428 EAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSSAAEAAEVILR 507 (519)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998743 56799999999999999999999999999999999999999999
Q ss_pred hhHHhhccCC
Q 007313 581 SDCVVVEIKE 590 (608)
Q Consensus 581 iD~iI~~~~~ 590 (608)
+|++|+.+|+
T Consensus 508 id~ii~~~~~ 517 (519)
T TIGR02341 508 VDNIIKAAPR 517 (519)
T ss_pred HHHHHhcCCC
Confidence 9999999884
No 32
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.6e-87 Score=736.94 Aligned_cols=438 Identities=23% Similarity=0.305 Sum_probs=398.5
Q ss_pred cHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCC
Q 007313 71 DGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDG 150 (608)
Q Consensus 71 ~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDG 150 (608)
.++++..|+++|.+|+++|++||||+||+|||++++|+++|||||+||+++|+++||+ ++|+++++++|++++|||
T Consensus 6 ~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GDG 81 (472)
T cd03341 6 LEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGDG 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCCC
Confidence 4789999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccc-cCc---h-HHHHHHHhhc-----CChhHHH
Q 007313 151 TTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VED---S-ELADVAAVSA-----GNNYEVG 220 (608)
Q Consensus 151 TTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~-v~~---~-~l~~va~ts~-----~~~~~ls 220 (608)
|||+++|+++||+++.+++++|+||+.|++||+.|++.+++.|++++++ +++ . .+.+++++++ +++++|+
T Consensus 82 TTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~ 161 (472)
T cd03341 82 TNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFLS 161 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHHH
Confidence 9999999999999999999999999999999999999999999999876 543 2 5778888775 3578999
Q ss_pred HHHHHHHHhhccC--Cc-------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCH
Q 007313 221 NMIAEAMSKVGRK--GV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNA 291 (608)
Q Consensus 221 ~Li~eAi~~vg~~--g~-------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~ 291 (608)
+|+++|+.+++++ |. |...+|++++|| ++++|++|++.+. .++++++||+|++++++++.
T Consensus 162 ~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~- 230 (472)
T cd03341 162 PLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI- 230 (472)
T ss_pred HHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC-
Confidence 9999999999875 43 223489999999 9999999986532 24478999999999999887
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCcccc
Q 007313 292 RDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALD 371 (608)
Q Consensus 292 ~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~ 371 (608)
|+||||++++|+++++++|..+ +|+||++|+ +++|+|||++|||++++ +++
T Consensus 231 -------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~-----~~~ 281 (472)
T cd03341 231 -------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLP-----RLG 281 (472)
T ss_pred -------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEec-----ccc
Confidence 8999999999999999987653 789999777 67899999999999999 688
Q ss_pred CCCCCCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHH
Q 007313 372 KVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (608)
Q Consensus 372 ~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~ 448 (608)
++++++||+|++|++. ++++++|.+|++. +++|||+|||+|+.
T Consensus 282 ~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------------~~~~TI~lrG~t~~ 327 (472)
T cd03341 282 APTPEEIGYCDSVYVEEIGDTKVVVFRQNKED----------------------------------SKIATIVLRGATQN 327 (472)
T ss_pred cCCHhHCCCceEEEEEEECCeeEEEEEccCCC----------------------------------CCeEEEEEECCCHH
Confidence 8889999999999864 4889999887531 46899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHH
Q 007313 449 ELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSV 527 (608)
Q Consensus 449 ~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~ 527 (608)
+++|+||+++||++++++++++| +||||||+|++++.+|++++++..+.++ +++++|++||+.||++|++|||+|+.+
T Consensus 328 ~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~-~~~~~~a~al~~ip~~L~~NaG~d~~~ 406 (472)
T cd03341 328 ILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQ-YAIKKFAEAFEVVPRTLAENAGLDATE 406 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 99999999999999999999999 9999999999999999999877767665 899999999999999999999999999
Q ss_pred HHHHHHhcC---CCceeeecCCC--cccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhc
Q 007313 528 VSEKVLSSD---NHKYGYNAATG--NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 587 (608)
Q Consensus 528 vi~kL~~~~---~~~~G~d~~~g--~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 587 (608)
++.+|+..| +.++|||+.+| ++.||++.|||||+.||+++|++|+|+|++|||+|++|..
T Consensus 407 ~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 407 VLSELYAAHQKGNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred HHHHHHHHHHccCCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 999997633 56899999999 9999999999999999999999999999999999999864
No 33
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.9e-86 Score=730.09 Aligned_cols=439 Identities=38% Similarity=0.542 Sum_probs=405.6
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhc
Q 007313 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (608)
Q Consensus 65 ~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d 144 (608)
+..++ +++|..+++||..|++++++||||+||+|||+++.|+++|||||+||+|+|+++||. ++|+++++++||
T Consensus 2 ~~~~~--~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~ 75 (464)
T cd00309 2 EREFG--EEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQD 75 (464)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHH
Confidence 45667 999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccc--cCch-HHHHHHHhhcC------C
Q 007313 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE--VEDS-ELADVAAVSAG------N 215 (608)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~--v~~~-~l~~va~ts~~------~ 215 (608)
+++||||||+++|+++|++++.+++++|+||..|++||+.|++.+++.|+++++| +.+. +|.++|+|+++ +
T Consensus 76 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~ 155 (464)
T cd00309 76 DEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGG 155 (464)
T ss_pred hHhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999 4445 89999999998 7
Q ss_pred hhHHHHHHHHHHHhhcc------CCcEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC
Q 007313 216 NYEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK 287 (608)
Q Consensus 216 ~~~ls~Li~eAi~~vg~------~g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~ 287 (608)
++.|++++++|+.++++ .+.|++ .+|++++|+ ++++|++|+++|.+|+| +++++||+|++++++
T Consensus 156 ~~~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~m-------~~~~~n~~Ili~~~~ 227 (464)
T cd00309 156 DDFLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPYM-------PKRLENAKILLLDCK 227 (464)
T ss_pred hHHHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCCC-------ceeecCceEEEEecC
Confidence 89999999999999988 466665 489999999 89999999999999875 668999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCC
Q 007313 288 ITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG 367 (608)
Q Consensus 288 I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~ 367 (608)
++. |||++++|+++++++|..+ +|++|++ +++++|+|||++|||++++
T Consensus 228 Le~-----------------lIi~~~~I~~~al~~L~~~------~I~~v~~-----~~~~~L~~Ia~~tGa~ii~---- 275 (464)
T cd00309 228 LEY-----------------VVIAEKGIDDEALHYLAKL------GIMAVRR-----VRKEDLERIAKATGATIVS---- 275 (464)
T ss_pred cce-----------------EEecCCCcCHHHHHHHHHC------CeEEEEe-----CCHHHHHHHHHHhCCEEec----
Confidence 887 7787788999999999875 6788884 6689999999999999999
Q ss_pred ccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecC
Q 007313 368 LALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGA 444 (608)
Q Consensus 368 ~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G 444 (608)
++++++++.+|+|++|++ +++++++|.++.. +++|||+|||
T Consensus 276 -~~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG 319 (464)
T cd00309 276 -RLEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRG 319 (464)
T ss_pred -ccccCCcccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeC
Confidence 588889999999999975 4567888887654 3589999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCC
Q 007313 445 QTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV 523 (608)
Q Consensus 445 ~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~ 523 (608)
+|+.+++|+||+++||+++++++++++ +|||||++||+++.+|.+++.+.++.+| +++++|++||+.||++|++|||+
T Consensus 320 ~t~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~NaG~ 398 (464)
T cd00309 320 ATEVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQ-LGIEAFADALEVIPRTLAENAGL 398 (464)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHH-HHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999996 9999999999999999999877666665 89999999999999999999999
Q ss_pred ChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007313 524 NGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 586 (608)
Q Consensus 524 d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 586 (608)
|+.+++.+|+..| ..++|+|..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|+
T Consensus 399 d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 399 DPIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred CHHHHHHHHHHHhhccCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 9999999998754 34789999999999999999999999999999999999999999999984
No 34
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.4e-86 Score=669.25 Aligned_cols=462 Identities=20% Similarity=0.313 Sum_probs=423.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.-..-+|+++|..+++.+++||||+||||+|++..|+.+|+|||+||+|-|++-||+ |+.|+++|++||.++||||
T Consensus 19 k~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQDaEVGDGT 94 (543)
T KOG0361|consen 19 KGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQDAEVGDGT 94 (543)
T ss_pred chhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhccccccCCc
Confidence 445568999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-------HHHHHHHhhcC------ChhH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-------ELADVAAVSAG------NNYE 218 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-------~l~~va~ts~~------~~~~ 218 (608)
||||+|++|+|+++..+++.|+||..|+++|++|...+++.|+++++.++.. -|.+.|.|+++ ++++
T Consensus 95 TSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~f 174 (543)
T KOG0361|consen 95 TSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEF 174 (543)
T ss_pred eeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHH
Confidence 9999999999999999999999999999999999999999999999988722 57788888764 4799
Q ss_pred HHHHHHHHHHhhccCC---c--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC------
Q 007313 219 VGNMIAEAMSKVGRKG---V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (608)
Q Consensus 219 ls~Li~eAi~~vg~~g---~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~------ 287 (608)
|++|++||+..+..+. . |++.+|++++|| .+++|+.|++.|....| +.+|+.|.||||+++|.+
T Consensus 175 F~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGf----EqqPKk~~NpkIl~LnvELElKaE 249 (543)
T KOG0361|consen 175 FAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNVELELKAE 249 (543)
T ss_pred HHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccch----hhCccccCCceEEEEeeeeeeccc
Confidence 9999999999997442 1 667899999999 79999999999987776 668889999999999864
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchh
Q 007313 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (608)
Q Consensus 288 -------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~ 349 (608)
+.+++++ .+.|+++..+|.++|++.-.|.|.|.++|..+.+ .+.|+++.++
T Consensus 250 kdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----------FCAGRV~~eD 318 (543)
T KOG0361|consen 250 KDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----------FCAGRVPEED 318 (543)
T ss_pred ccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----------eecCcCCHHH
Confidence 4555554 3568899999999999999999999999988643 3568999999
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 007313 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (608)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (608)
|+|+..+|||++.+ +..++.++.||.|..++ +++++|-+|+||+..
T Consensus 319 l~Rv~~acGGsi~t-----t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~a-------------------------- 367 (543)
T KOG0361|consen 319 LNRVMQACGGSIQT-----TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKA-------------------------- 367 (543)
T ss_pred HHHHHHhcCcchhh-----hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCcc--------------------------
Confidence 99999999999998 68899999999999986 688999999999863
Q ss_pred HHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHH
Q 007313 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (608)
Q Consensus 427 ~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (608)
..||+++||+.++.++|.+|++|||++++|.|+++. +|+|||++||++|++|++++.++.+++| +.+.+
T Consensus 368 ---------ktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~q-~~i~A 437 (543)
T KOG0361|consen 368 ---------KTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQ-LFINA 437 (543)
T ss_pred ---------ceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHHH-HHHHH
Confidence 589999999999999999999999999999999998 9999999999999999999999999877 78999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchh
Q 007313 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 582 (608)
Q Consensus 506 ~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 582 (608)
|++||+.|||+||+|||+|...++++|+.. ++.|||+|..+..+.|+++.+||||..||++++..|+|+|++||.+|
T Consensus 438 ~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~aateAa~lIlsvD 517 (543)
T KOG0361|consen 438 YAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVKINAITAATEAACLILSVD 517 (543)
T ss_pred HHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHHHHHHHHHHHhhhheEehh
Confidence 999999999999999999999999999965 46899999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCC
Q 007313 583 CVVVEIKEPEPA 594 (608)
Q Consensus 583 ~iI~~~~~~~~~ 594 (608)
..|++++...++
T Consensus 518 eTikn~~S~~~~ 529 (543)
T KOG0361|consen 518 ETIKNPKSQSAP 529 (543)
T ss_pred hhhcCCcccCCC
Confidence 999998876655
No 35
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=3.5e-80 Score=685.36 Aligned_cols=440 Identities=30% Similarity=0.479 Sum_probs=400.2
Q ss_pred HHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCchhHHHHHHHHHHH
Q 007313 85 LADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAE 164 (608)
Q Consensus 85 la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGTTt~vvLa~~Ll~e 164 (608)
|+++|++||||+|++|||+++.|+++|||||+||+++|+++||+ ++||++++++|++++||||||+++|+++||++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch--HHHHHHHhhcCCh------hHHHHHHHHHHHhhc-----
Q 007313 165 GVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS--ELADVAAVSAGNN------YEVGNMIAEAMSKVG----- 231 (608)
Q Consensus 165 ~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~--~l~~va~ts~~~~------~~ls~Li~eAi~~vg----- 231 (608)
+.+++++|+||..|++||+.+.+.+++.|++++++++.. .+.++|+++++++ +.|++++++|+..+.
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999998864 8999999999876 899999999994332
Q ss_pred -cCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHH-----------------
Q 007313 232 -RKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARD----------------- 293 (608)
Q Consensus 232 -~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~----------------- 293 (608)
..++++ ..|++++|| ++++|++|+++|.++ +|++.+++|+|++++++++..+.
T Consensus 157 ~~i~i~~-i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~ 227 (485)
T PF00118_consen 157 DNIKIIK-IPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELS 227 (485)
T ss_dssp GGEEEEE-EESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHH
T ss_pred cchhhhh-hcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHH
Confidence 222233 578888998 899999999999887 36678899999999998766655
Q ss_pred ------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCC
Q 007313 294 ------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVG 367 (608)
Q Consensus 294 ------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~ 367 (608)
+.++++++.+.|+++||++++|++.++++|..|++ .+++ ++++++|++|+.+||+++++
T Consensus 228 ~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~~i~-----~v~~~~l~~i~~~tg~~ii~---- 292 (485)
T PF00118_consen 228 KQEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGI------LVIR-----RVSKEDLERIARATGASIIS---- 292 (485)
T ss_dssp HHHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTH------EEES-----SEHHHHHHHHHHHHTSBEBS----
T ss_pred hhhhhhhccccceEeeeccceeeeecccccccchhhhhhhh------hccc-----cchHHHHHhhhcccCCcEec----
Confidence 78899999999999999999999999999988854 4443 67899999999999999999
Q ss_pred ccccCCCCCCCcceeEE---EEcCCeEEEEcC--CCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEe
Q 007313 368 LALDKVGKEVLGNASKV---VLTKDTTTIVGD--GSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQV 442 (608)
Q Consensus 368 ~~l~~~~~~~lG~~~~v---~i~~~~~~~i~~--~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v 442 (608)
++++++++.+|+|+.+ ++++++++++++ +. .+..+||+|
T Consensus 293 -~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~~~Till 336 (485)
T PF00118_consen 293 -SLDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCL-----------------------------------SSKICTILL 336 (485)
T ss_dssp -SCGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSES-----------------------------------SSSEEEEEE
T ss_pred -ccccccchhhhhhhhhhhccccccccccccccccc-----------------------------------ccCceEEEe
Confidence 5788888889999999 678899999983 32 357999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHc
Q 007313 443 GAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNA 521 (608)
Q Consensus 443 ~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~Na 521 (608)
||+|+.+++|++++++||+++++++++++ +|||||++|++|+++|++++.+.++.++ +++++|++||+.||++|++||
T Consensus 337 ~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~-~~~~~~a~aL~~ip~~L~~Na 415 (485)
T PF00118_consen 337 RGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGKEQ-LAIEAFADALESIPKTLAQNA 415 (485)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSHHH-HHHHHHHHHTTHHHHHHHHHT
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCchh-hhHHHHHHHHHHhhhhhhhcc
Confidence 99999999999999999999999999987 9999999999999999999887766655 899999999999999999999
Q ss_pred CCChHHHHHHHHh--cCCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007313 522 GVNGSVVSEKVLS--SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 589 (608)
Q Consensus 522 G~d~~~vi~kL~~--~~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 589 (608)
|+|+.+++++|+. +.++++|||+.+|++.||.+.|||||+.+|+++|+.|+|+|++||++|++|..+|
T Consensus 416 G~~~~~~~~~l~~~h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a~~iL~id~iI~~~~ 485 (485)
T PF00118_consen 416 GLDSSEVISKLKSFHNNGNNYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIASLILRIDEIIMAKP 485 (485)
T ss_dssp TSTHHHHHHHHHHHHHSTTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEESS
T ss_pred CCCceeeehhhHhhhccccccCcCccCCceeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999987 3456999999999999999999999999999999999999999999999998876
No 36
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-78 Score=613.26 Aligned_cols=458 Identities=23% Similarity=0.356 Sum_probs=413.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecC--CCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCC
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESK--YGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~--~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GD 149 (608)
+++|...+.|...+.|+|+||||||||+||+... .|.+.|||||+||||+|.+++|. ||+|++.|+-||+++||
T Consensus 17 e~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpa----AkvLv~~S~vQD~EvGD 92 (527)
T KOG0363|consen 17 ENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPA----AKVLVDISKVQDDEVGD 92 (527)
T ss_pred hhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCch----hhheeccccccccccCC
Confidence 8899999999999999999999999999999863 46799999999999999999999 99999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch------HHHHHHHhhcC------Chh
Q 007313 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS------ELADVAAVSAG------NNY 217 (608)
Q Consensus 150 GTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~------~l~~va~ts~~------~~~ 217 (608)
|||||+||+.+||+|+.+++.+.+||+.|+.||+.|...+.+.|.+.++..... +|.++|+|.+. .++
T Consensus 93 GTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~ke 172 (527)
T KOG0363|consen 93 GTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKE 172 (527)
T ss_pred CceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999999888765421 89999998754 469
Q ss_pred HHHHHHHHHHHhhccCC-----cEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC----
Q 007313 218 EVGNMIAEAMSKVGRKG-----VVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (608)
Q Consensus 218 ~ls~Li~eAi~~vg~~g-----~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I---- 288 (608)
+|++|+++|+.++...+ .|.+..|++++|| .+-+|+.+++.+-. +.|+.++||+||+-+.+.
T Consensus 173 hFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~mDtDK 243 (527)
T KOG0363|consen 173 HFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTPMDTDK 243 (527)
T ss_pred HHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCCCcccc
Confidence 99999999999986543 2445799999999 79999999987543 356789999999987642
Q ss_pred ----------CCHH-----------HHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcc
Q 007313 289 ----------TNAR-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKS 347 (608)
Q Consensus 289 ----------~~~~-----------~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~ 347 (608)
++.. .+...++++.++|+|+.|-.+-|.+...++|... .|++|....|
T Consensus 244 vKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~da------gi~aIEHADF----- 312 (527)
T KOG0363|consen 244 VKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADA------GIMAIEHADF----- 312 (527)
T ss_pred eeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhc------Ccceeecccc-----
Confidence 2221 3567799999999999999999999888888765 5688886665
Q ss_pred hhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHH
Q 007313 348 QYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (608)
Q Consensus 348 ~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (608)
+-++|++.+|||.+++ ++++++...||+|+.++ +++++++.|.|+.-
T Consensus 313 dGiERLalvtGGeI~S-----TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~------------------------- 362 (527)
T KOG0363|consen 313 DGIERLALVTGGEIVS-----TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL------------------------- 362 (527)
T ss_pred hhHHHHhhcccceeee-----ccCCcchhccccchhhHHHhcCccceeeeccccc-------------------------
Confidence 4589999999999999 79999999999999885 78999999999753
Q ss_pred HHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHH
Q 007313 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (608)
Q Consensus 425 ~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (608)
|..|||++||+|++.++|.+|++|||||++...+++. +|.||||+||.++..+.+++...++++- +++
T Consensus 363 ----------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGkea-~Ai 431 (527)
T KOG0363|consen 363 ----------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKEA-LAI 431 (527)
T ss_pred ----------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchhh-HHH
Confidence 5589999999999999999999999999999999998 9999999999999999999999999876 799
Q ss_pred HHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhc
Q 007313 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (608)
Q Consensus 504 ~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~ 580 (608)
++|++||..+|.+||.|||+|+.+++++|++.| ...+|+|..+|++.||.+.||+|.+++|++.+.+|.|+|.+|||
T Consensus 432 eAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~sasEaae~ilr 511 (527)
T KOG0363|consen 432 EAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSSASEAAEMILR 511 (527)
T ss_pred HHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHHHHHhhhHHHHHHHHh
Confidence 999999999999999999999999999999864 57999999999999999999999999999999999999999999
Q ss_pred hhHHhhccCCCCCC
Q 007313 581 SDCVVVEIKEPEPA 594 (608)
Q Consensus 581 iD~iI~~~~~~~~~ 594 (608)
+|.||.+.|++..+
T Consensus 512 vD~Iik~aPR~r~~ 525 (527)
T KOG0363|consen 512 VDNIIKAAPRERER 525 (527)
T ss_pred hhhhhhcCCccccc
Confidence 99999999987643
No 37
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-77 Score=608.37 Aligned_cols=458 Identities=22% Similarity=0.335 Sum_probs=411.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+++|.+|+++..+++|+++|||||+||||||....|+++|||||+||||.|++-||+ |+||++++..||.++||||
T Consensus 25 ~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD~eaGDGT 100 (534)
T KOG0358|consen 25 EQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQDSEAGDGT 100 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhccccccCCc
Confidence 789999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC------hhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN------NYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~------~~~ls~L 222 (608)
||+|+||++||+.+.+|+.+|+||+.|...|+.|.+..+++|++++.|++ +. .|.+-|+||+|. ...++.|
T Consensus 101 TsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapm 180 (534)
T KOG0358|consen 101 TSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPM 180 (534)
T ss_pred eEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchH
Confidence 99999999999999999999999999999999999999999999999876 33 588899999864 5778999
Q ss_pred HHHHHHhhccCC--------cEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC----
Q 007313 223 IAEAMSKVGRKG--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI---- 288 (608)
Q Consensus 223 i~eAi~~vg~~g--------~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I---- 288 (608)
.++|+.++-... .|++ +.|+.++|+ ++++|++|++..... ..|..++++||-++.+.|
T Consensus 181 AVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~-------~gptriekAkIglIQF~iS~PK 252 (534)
T KOG0358|consen 181 AVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKS-------AGPTRIEKAKIGLIQFQISPPK 252 (534)
T ss_pred HHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccC-------CCcchhhhceeeEEEEEecCCC
Confidence 999999985421 2333 699999999 999999999875432 145578888988877643
Q ss_pred ---------CCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcch
Q 007313 289 ---------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQ 348 (608)
Q Consensus 289 ---------~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~ 348 (608)
+++.+ ++++++++++.|+|++++|+.|=.++++.|..+.+. .++|++|| |+.++
T Consensus 253 tdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~-klkimvik-----dieRe 326 (534)
T KOG0358|consen 253 TDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLA-KLKIMVIK-----DIERE 326 (534)
T ss_pred CCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHH-hCcEEEEc-----cccHh
Confidence 33322 467889999999999999999988888777776663 45999998 78899
Q ss_pred hHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE----cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHH
Q 007313 349 YLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL----TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYERE 424 (608)
Q Consensus 349 ~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i----~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~ 424 (608)
+++.+|+.+|++++. +++.++++.||+++-++- ++.+++-+.++.++
T Consensus 327 diefick~l~c~Pia-----~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~------------------------ 377 (534)
T KOG0358|consen 327 DIEFICKTLGCKPIA-----DIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA------------------------ 377 (534)
T ss_pred hHHHHHhhcCCeecc-----hhhhcChhhcCcchhhhhcccCCCccEEEEEEeecC------------------------
Confidence 999999999999999 699999999999998863 34577878776543
Q ss_pred HHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHH
Q 007313 425 KLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGA 503 (608)
Q Consensus 425 ~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~ 503 (608)
|..++|++||.+...++|.+|++|||||++|+.++.. ++||||+.||+++..|.++++++.+.+. ++.
T Consensus 378 ----------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~~~-yc~ 446 (534)
T KOG0358|consen 378 ----------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGVEA-YCW 446 (534)
T ss_pred ----------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccchh-HHH
Confidence 6789999999999999999999999999999999997 9999999999999999999999999887 689
Q ss_pred HHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhc
Q 007313 504 DIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (608)
Q Consensus 504 ~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~ 580 (608)
+.|++|||.||.|||+|||++|..++.+|++. ++.++|+|...|.+.||++..|+.|+.|-.+++..|+|++.+||+
T Consensus 447 rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~VvQPllVs~SaitlA~Etvr~ILK 526 (534)
T KOG0358|consen 447 RAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENVVQPLLVSISAITLATETVRSILK 526 (534)
T ss_pred HHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhcccceeeeHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999975 468999999999999999999999999999999999999999999
Q ss_pred hhHHhhc
Q 007313 581 SDCVVVE 587 (608)
Q Consensus 581 iD~iI~~ 587 (608)
||+|+..
T Consensus 527 IDDIv~a 533 (534)
T KOG0358|consen 527 IDDIVNA 533 (534)
T ss_pred hhhhccc
Confidence 9999864
No 38
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-70 Score=569.73 Aligned_cols=462 Identities=24% Similarity=0.322 Sum_probs=407.2
Q ss_pred CcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCC
Q 007313 70 KDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGD 149 (608)
Q Consensus 70 ~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GD 149 (608)
..+++-..++++|.+|+++++|+|||.||||||+|+.|+..+|||.+||+++++++||. ||||+++++.|+++.||
T Consensus 23 ~~e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGD 98 (537)
T KOG0362|consen 23 GEEEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGD 98 (537)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCC
Confidence 34778889999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccc-cCch-HHHHHHHhh-----cCChhHHHHH
Q 007313 150 GTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKE-VEDS-ELADVAAVS-----AGNNYEVGNM 222 (608)
Q Consensus 150 GTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~-v~~~-~l~~va~ts-----~~~~~~ls~L 222 (608)
||+++|+|+++||+++.++|..|++|.+|+.||+.|.+++++.|.++... +.+. +...+++++ ..++++++++
T Consensus 99 gtnfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~l 178 (537)
T KOG0362|consen 99 GTNFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKL 178 (537)
T ss_pred CceEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999987532 2222 222444443 4568999999
Q ss_pred HHHHHHhhccCCc-------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC--------
Q 007313 223 IAEAMSKVGRKGV-------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------- 287 (608)
Q Consensus 223 i~eAi~~vg~~g~-------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~-------- 287 (608)
+++|+..+.|.+. +.+..|+++++| .++.||+|++.. ++....-+.++|.++.|+
T Consensus 179 Va~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~~---------eG~v~~ak~arvAvf~cP~d~~~TEt 248 (537)
T KOG0362|consen 179 VAKACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRDP---------EGEVKSAKDARVAVFACPFDIAQTET 248 (537)
T ss_pred HHHHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEecccc---------CCcccccccceeEEEecCCCcccccC
Confidence 9999999988742 233699999999 899999999873 333456678899999887
Q ss_pred -----CCCHHHHHH-----------HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHH
Q 007313 288 -----ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (608)
Q Consensus 288 -----I~~~~~l~~-----------~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~ 351 (608)
|++++++.+ .++.+...|+++|++...+++.+|+++ |++ +|++++.++ +.+|.
T Consensus 249 kgTvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nky----~ImVlqi~S-----k~eLr 317 (537)
T KOG0362|consen 249 KGTVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NKY----KIMVLQINS-----KFDLR 317 (537)
T ss_pred cceeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--ccc----cEEEEEecc-----HhhHH
Confidence 677776644 467778899999999999999888855 655 799999887 78899
Q ss_pred HHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 007313 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (608)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~e 428 (608)
|+|+..||++++ ++..+.+..+|+|++|. +++...+.|.....
T Consensus 318 rlcrtvGA~~l~-----rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~----------------------------- 363 (537)
T KOG0362|consen 318 RLCRTVGATALP-----RLFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST----------------------------- 363 (537)
T ss_pred HHHHHcCCccch-----hccCCCCccccccceeeeeecCCceEEEEeeccC-----------------------------
Confidence 999999999999 68899999999999995 56777766654221
Q ss_pred HHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 007313 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (608)
Q Consensus 429 r~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (608)
.+.++|++|||+|+..+|+.||.+.|++++.+...+++ ++||+|++|++|+..|.++.+++++.+| ++++.|+
T Consensus 364 -----~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa 437 (537)
T KOG0362|consen 364 -----GTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFA 437 (537)
T ss_pred -----CCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHH
Confidence 13589999999999999999999999999999999998 9999999999999999999999999998 6999999
Q ss_pred HHHhHHHHHHHHHcCCChHHHHHHHHhcCC--CceeeecCCC-cccccccCCcccchHHHHHHHHHHHHHHHHHhchhHH
Q 007313 508 RALCYPLKLIAKNAGVNGSVVSEKVLSSDN--HKYGYNAATG-NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 584 (608)
Q Consensus 508 ~AL~~i~~~La~NaG~d~~~vi~kL~~~~~--~~~G~d~~~g-~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~i 584 (608)
+||+.+|++|++|||++..+++++|+..|. .+.|+|+... ...|+.++||||-+.+|.++++.|+++|.++|++|+|
T Consensus 438 ~Ale~~PktlaEnagl~~~evia~ly~~h~~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqi 517 (537)
T KOG0362|consen 438 EALEVLPKTLAENAGLAVTEVIAKLYAVHQGGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQI 517 (537)
T ss_pred HHhccccHhHHHhcCCcHHHHHHHHHHhhcCCCcceeeeeccccccChhhhchHHHHHHHHHHHHHHHhhhheeeehhhe
Confidence 999999999999999999999999987653 5678888766 5899999999999999999999999999999999999
Q ss_pred hhccCCCCCCCC
Q 007313 585 VVEIKEPEPAMP 596 (608)
Q Consensus 585 I~~~~~~~~~~~ 596 (608)
|+.+|...|++|
T Consensus 518 imak~aggp~~~ 529 (537)
T KOG0362|consen 518 IMAKKAGGPKPP 529 (537)
T ss_pred eEecccCCCCCC
Confidence 999999888744
No 39
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-69 Score=562.67 Aligned_cols=463 Identities=24% Similarity=0.310 Sum_probs=410.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+.+|..+..++..++++|++||||-|+|||+++..|++.+||||+|||+.+.++||+ +|+|++.++.||+++||||
T Consensus 18 ~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~evgDgt 93 (545)
T KOG0360|consen 18 ERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEEVGDGT 93 (545)
T ss_pred hhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhccccccCCc
Confidence 788888999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccCch---HHHHHHHhhcCC------hhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVEDS---ELADVAAVSAGN------NYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~-~s~~v~~~---~l~~va~ts~~~------~~~ls~ 221 (608)
|++++++++||+.+.+|+..++||+.|+.||+.|+..+++++++ +++|++.. -|.++++++++. .++|++
T Consensus 94 tsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds~~f~~ 173 (545)
T KOG0360|consen 94 TSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDSDFFTE 173 (545)
T ss_pred eEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccchHHHHH
Confidence 99999999999999999999999999999999999999999976 57787754 789999998753 589999
Q ss_pred HHHHHHHhhcc---CCc---------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC--
Q 007313 222 MIAEAMSKVGR---KGV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-- 287 (608)
Q Consensus 222 Li~eAi~~vg~---~g~---------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~-- 287 (608)
++++|+..+.- +|. |-+-+|.+..|| .++.|+.++....+. .|+..+.|+||+++|+.
T Consensus 174 ~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq-------~m~~~i~~~Kiacld~~Lq 245 (545)
T KOG0360|consen 174 MVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQ-------MMPLRIKNAKIACLDFTLQ 245 (545)
T ss_pred HHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhh-------ccccccccceeeeEecccc
Confidence 99999988732 221 333599999999 799999999877653 47788899999999975
Q ss_pred -----------CCCHHHHH-----------HHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 288 -----------ITNARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 288 -----------I~~~~~l~-----------~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
|.+++++. +-++++...|+|+|+++++|||.++.+|+.. .++||+ +.
T Consensus 246 k~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~vea------gamAVr-----R~ 314 (545)
T KOG0360|consen 246 KTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEA------GAMAVR-----RC 314 (545)
T ss_pred cccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHc------chhhhH-----HH
Confidence 45665442 3467889999999999999999999999987 446665 67
Q ss_pred cchhHHHHHHHhCCeEeeccCCccc-cCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHH
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDY 421 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~ 421 (608)
++++|++|+++||++++++--+++= |.+.+..+|+|++|. |++|+++++.+..-
T Consensus 315 ~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka---------------------- 372 (545)
T KOG0360|consen 315 KKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA---------------------- 372 (545)
T ss_pred HHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc----------------------
Confidence 8999999999999999995332221 356778999999995 67889888877421
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHH
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEK 500 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~ 500 (608)
..|+|++||++++.++|++|++|||+++++..++++ +||||||+|.+|+-+|+.|+.+..+.||
T Consensus 373 --------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~srE~- 437 (545)
T KOG0360|consen 373 --------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVGSREQ- 437 (545)
T ss_pred --------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCccHHH-
Confidence 368999999999999999999999999999999999 9999999999999999999998888888
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCceeeecCCCcccccccCCcccchHHHHHHHH
Q 007313 501 VGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (608)
Q Consensus 501 ~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~-----------~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~ 569 (608)
+++--|+.||.++|++|+-||+.|+.+++.+++..| ..++|.|+.+|++.|.++.|+++|.-+|..+|+
T Consensus 438 laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn~~~g~~ep~~~kvksLk 517 (545)
T KOG0360|consen 438 LAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDNKSAGSFEPPIVKVKSLK 517 (545)
T ss_pred HHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecceeeeeeccceeehhhhH
Confidence 577788889999999999999999999999998643 258999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHHhhccCCCCCC
Q 007313 570 HASSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 570 ~A~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
.|+|.+..+||+|++|.-.|+.+..
T Consensus 518 ~ateaaitiLriD~li~l~~~~~~~ 542 (545)
T KOG0360|consen 518 FATEAAITILRIDDLIKLLPELQVA 542 (545)
T ss_pred HHHHhhhhhcchhhhhhcCcccccc
Confidence 9999999999999999888776543
No 40
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-67 Score=544.01 Aligned_cols=451 Identities=20% Similarity=0.280 Sum_probs=408.4
Q ss_pred HHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCchhHHH
Q 007313 77 KLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVV 156 (608)
Q Consensus 77 ~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGTTt~vv 156 (608)
.++++.++++|.+++++||+.|.||+.++.|.+..||||..|+++|++.||. |+-+.+++.+||+++||||||+++
T Consensus 23 ~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqdeevgdgttsvi~ 98 (527)
T KOG0364|consen 23 GNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDEEVGDGTTSVII 98 (527)
T ss_pred cchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhcccccccCCceeeee
Confidence 4688999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch---HHHHHHHhhcC------ChhHHHHHHHHHH
Q 007313 157 LAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS---ELADVAAVSAG------NNYEVGNMIAEAM 227 (608)
Q Consensus 157 La~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~---~l~~va~ts~~------~~~~ls~Li~eAi 227 (608)
|++|+|.++..++.+|+||+.|++.|.+|++.++..+++.++|++.+ .++.+...+.+ +.+.++++..+|+
T Consensus 99 lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~av 178 (527)
T KOG0364|consen 99 LAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRWSDLICNLALDAV 178 (527)
T ss_pred ehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHHHH
Confidence 99999999999999999999999999999999999999998887754 67777776643 5678999999999
Q ss_pred HhhccC-Cc---------EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCC-------
Q 007313 228 SKVGRK-GV---------VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITN------- 290 (608)
Q Consensus 228 ~~vg~~-g~---------I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~------- 290 (608)
.+++.+ |. +.+.+|+.+++| ++++|+.+.+...||. |...++||+|+++|+++..
T Consensus 179 k~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD~~LeykkGeSqt 250 (527)
T KOG0364|consen 179 KTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLDCPLEYKKGESQT 250 (527)
T ss_pred HHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEecCCccCCCCcccc
Confidence 999875 21 223699999999 8999999999999984 6678999999999997421
Q ss_pred -----------------HHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHH
Q 007313 291 -----------------ARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDI 353 (608)
Q Consensus 291 -----------------~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~i 353 (608)
.+++..+++.+....++||++.+++++.|.++|.++++ .+++++|+.+-.+|
T Consensus 251 nve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i-----------T~~rr~rKtDn~ri 319 (527)
T KOG0364|consen 251 NVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI-----------TAIRRLRKTDNNRI 319 (527)
T ss_pred ceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc-----------hhhhhhhccccchh
Confidence 12345678888899999999999999999999998854 35568899999999
Q ss_pred HHHhCCeEeeccCCccccCCCCCCCcc-eeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 007313 354 AILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNER 429 (608)
Q Consensus 354 a~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er 429 (608)
+.+||+++++ +.+++.+.+.|+ |+-++ +++++|+||.+|.+|
T Consensus 320 a~acga~iv~-----rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~p----------------------------- 365 (527)
T KOG0364|consen 320 ARACGARIVN-----RPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEP----------------------------- 365 (527)
T ss_pred hhhcCceecc-----ChhhCchhccCcccceeeeeccCchhhhhhhhcCCC-----------------------------
Confidence 9999999998 789999999996 77776 468899999999887
Q ss_pred HHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHH
Q 007313 430 IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKR 508 (608)
Q Consensus 430 ~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~ 508 (608)
+.|||++||+|..+++|.+|.+.||+.+.|+.+-++ ++|||||+||.+|+.|.+.+...++.+| .-+.+++.
T Consensus 366 ------kaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVek-wPY~Ava~ 438 (527)
T KOG0364|consen 366 ------KACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVEK-WPYGAVAG 438 (527)
T ss_pred ------cceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchhc-cchhhhhc
Confidence 479999999999999999999999999999999998 9999999999999999998877777776 78999999
Q ss_pred HHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHh
Q 007313 509 ALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVV 585 (608)
Q Consensus 509 AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI 585 (608)
||+.+||+|++|+|.++...+..+++.| ...||+|.++|.+.||.+.++|||..+|.+..++|.+.++++||+|+|+
T Consensus 439 AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktavesa~~LLRIddIv 518 (527)
T KOG0364|consen 439 ALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKTAVESACLLLRIDDIV 518 (527)
T ss_pred CceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhhhhhhhhhHHHHHHHHHHhhhcee
Confidence 9999999999999999999999998754 4678999999999999999999999999999999999999999999999
Q ss_pred hccCCC
Q 007313 586 VEIKEP 591 (608)
Q Consensus 586 ~~~~~~ 591 (608)
....+.
T Consensus 519 sg~kk~ 524 (527)
T KOG0364|consen 519 SGKKKR 524 (527)
T ss_pred eeeeec
Confidence 887664
No 41
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-61 Score=495.30 Aligned_cols=450 Identities=23% Similarity=0.359 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCchh
Q 007313 74 AMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTT 153 (608)
Q Consensus 74 ~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGTTt 153 (608)
+...++.+..-+.+.+++.+||+|..||++++.|++++|+||.+.+++|+++||. +-++..++..|++..||||||
T Consensus 18 al~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGttS 93 (520)
T KOG0359|consen 18 ALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTTS 93 (520)
T ss_pred ceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcce
Confidence 4455677778899999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchHHHHHHHhhcCC------hhHHHHHHHHHH
Q 007313 154 SVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGN------NYEVGNMIAEAM 227 (608)
Q Consensus 154 ~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~------~~~ls~Li~eAi 227 (608)
+|+|.++|++++...+..|+||..|..||+.|.+.++++|+..+++++...|..|++++++. -+.+++.+++|+
T Consensus 94 ~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aV 173 (520)
T KOG0359|consen 94 VVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVDRETLKDVARTSLRTKVHAELADVLTPIVVDSV 173 (520)
T ss_pred EEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchhHHHHHHHHHHhhcCcccHHHHhHhHHHHHhhh
Confidence 99999999999999999999999999999999999999999888888776899999999875 377888999999
Q ss_pred Hhhcc-CCcEE-----E--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC----------
Q 007313 228 SKVGR-KGVVT-----L--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT---------- 289 (608)
Q Consensus 228 ~~vg~-~g~I~-----v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~---------- 289 (608)
..+.+ ++.|. + -+-.+..|+ .+++|.++++|-+||. ||+..+|+.||++|-.++
T Consensus 174 l~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Einsgf 245 (520)
T KOG0359|consen 174 LCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINSGF 245 (520)
T ss_pred eeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeeccccccccccccch
Confidence 98873 33221 1 244566777 7999999999999985 778899999999986532
Q ss_pred ---CHHH-----------HHHHHHHHHHcCC---CEE-EEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHH
Q 007313 290 ---NARD-----------LINVLEDAIRGAY---PIL-IIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLD 351 (608)
Q Consensus 290 ---~~~~-----------l~~~le~~~~~~~---~lv-Iia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~ 351 (608)
+++| +.+.+.+++..+. .+| |.+++||+..|+.|.++ +|+|++ +-++..||
T Consensus 246 fYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~------gIlaLR-----RAKRRNmE 314 (520)
T KOG0359|consen 246 FYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKS------GILALR-----RAKRRNME 314 (520)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhc------chHHHH-----HHhhhhHH
Confidence 2222 1223445554443 344 55789999999999887 446555 56788999
Q ss_pred HHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 007313 352 DIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNE 428 (608)
Q Consensus 352 ~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~e 428 (608)
|+..+|||..+. ++++++|+.||+|+.|+ +++++|||+++|.+|
T Consensus 315 RL~lacGG~a~n-----svddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p---------------------------- 361 (520)
T KOG0359|consen 315 RLVLACGGEAVN-----SVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP---------------------------- 361 (520)
T ss_pred HHHHhhccceec-----ccccCChhhccccceeEEeeccceeeEeeecCCCC----------------------------
Confidence 999999999998 79999999999999996 689999999999987
Q ss_pred HHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHH
Q 007313 429 RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVK 507 (608)
Q Consensus 429 r~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a 507 (608)
+.|||+++||+...+.+.|+.++|++++++++++++ ++||+|++|..++.+|+...++.+++.+ +++++|+
T Consensus 362 -------~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra~-~g~~afa 433 (520)
T KOG0359|consen 362 -------SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRAY-LGVKAFA 433 (520)
T ss_pred -------cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchhh-hhHHHHH
Confidence 479999999999999999999999999999999998 9999999999999999988888888876 8999999
Q ss_pred HHHhHHHHHHHHHcCCChHHHHHHHHhcCC-CceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhh
Q 007313 508 RALCYPLKLIAKNAGVNGSVVSEKVLSSDN-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV 586 (608)
Q Consensus 508 ~AL~~i~~~La~NaG~d~~~vi~kL~~~~~-~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~ 586 (608)
+||..+|++|++|+|+|..+.+.+|...++ ..+|+|+.+|+..|....||||.+.||++.|.+++-+|+.||-+|+|+.
T Consensus 434 ~all~ipk~La~nsg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi~r 513 (520)
T KOG0359|consen 434 NALLVIPKTLAKNSGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEIIR 513 (520)
T ss_pred hhhhhhhHHHHHhcCCchHHHHHHHHHhhhhhhcccccccCCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987653 3469999999999999999999999999999999999999999999996
Q ss_pred c
Q 007313 587 E 587 (608)
Q Consensus 587 ~ 587 (608)
.
T Consensus 514 A 514 (520)
T KOG0359|consen 514 A 514 (520)
T ss_pred c
Confidence 5
No 42
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-59 Score=472.64 Aligned_cols=373 Identities=24% Similarity=0.300 Sum_probs=345.0
Q ss_pred cccccccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHH
Q 007313 58 PKIYAAKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVR 137 (608)
Q Consensus 58 ~~~~~~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~ 137 (608)
+|-...|.-.|| -++.+..+-+..+++.++++|+||+|++|++..+.|++.+|||| .|++ ++|+.
T Consensus 15 LrDQd~~~Ri~G--~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I----akLmv 79 (400)
T KOG0357|consen 15 LRDQERKDRLFG--LDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI----AKLIV 79 (400)
T ss_pred eeeccCCchhhH--HHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH----HHHHH
Confidence 455546777888 99999999999999999999999999999999999999999999 6788 99999
Q ss_pred HHHHhhccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCchHHHHHHHhhcCChh
Q 007313 138 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDSELADVAAVSAGNNY 217 (608)
Q Consensus 138 ~~a~~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~l~~va~ts~~~~~ 217 (608)
..++.|+.+.|||||.+++|++.+++++.+++..|+||..|..||+.+.+.+++.|++.+.+++
T Consensus 80 ~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e---------------- 143 (400)
T KOG0357|consen 80 ILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE---------------- 143 (400)
T ss_pred HhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc----------------
Confidence 9999999999999999999999999999999999999999999999999999999888765533
Q ss_pred HHHHHHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHH
Q 007313 218 EVGNMIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINV 297 (608)
Q Consensus 218 ~ls~Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~ 297 (608)
+..+
T Consensus 144 ----------------------------------------------------------------------------f~em 147 (400)
T KOG0357|consen 144 ----------------------------------------------------------------------------FEEM 147 (400)
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 2346
Q ss_pred HHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCC
Q 007313 298 LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV 377 (608)
Q Consensus 298 le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~ 377 (608)
++++++.|.+++||+|++||||.++|..|.+ |..+|+...++|-||++|||+++. .+++++++.
T Consensus 148 i~~vK~~ga~l~icqwgfddeanhll~~n~l-----------pavrwVGGpEiEliAiaT~grIVp-----rF~eL~~~k 211 (400)
T KOG0357|consen 148 IQQIKETGANLAICQWGFDDEANHLLLQNNL-----------PAVRWVGGPEIELIAIATGGRIVP-----RFSELTAEK 211 (400)
T ss_pred HHHHHhhCCcEEEEecccCchhhhHHhhcCC-----------CceeecCCcceEEEEeecCCeeec-----cHhhhCHhh
Confidence 7888999999999999999999999999976 666788889999999999999999 799999999
Q ss_pred CcceeEEE---E--cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHH
Q 007313 378 LGNASKVV---L--TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (608)
Q Consensus 378 lG~~~~v~---i--~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E 452 (608)
||+|+.|+ + ++|++.+++.|++. +.+||.|||.+..+++|
T Consensus 212 LG~aglVrE~sfgttkdkmlviEqc~ns-----------------------------------kaVTifvRg~Nkmii~E 256 (400)
T KOG0357|consen 212 LGFAGLVREISFGTTKDKMLVIEQCKNS-----------------------------------KAVTIFVRGGNKMIIEE 256 (400)
T ss_pred ccccceEEEEecccccceEEEEEecCCC-----------------------------------ceEEEEEecCcceeHHH
Confidence 99999986 2 38899999999874 47899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHH
Q 007313 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (608)
Q Consensus 453 ~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~k 531 (608)
.||++|||||++|+.+++. +|+|||++|+.|+-++.+.+..+++.|| +++..|++||++||..||+|+|++|.+.+++
T Consensus 257 akrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaensgl~pi~~ls~ 335 (400)
T KOG0357|consen 257 AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENSGLDPIETLSD 335 (400)
T ss_pred HHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhccCCCchhhhhH
Confidence 9999999999999999998 9999999999999999999999999998 5999999999999999999999999999999
Q ss_pred HHhc----CCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccC
Q 007313 532 VLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIK 589 (608)
Q Consensus 532 L~~~----~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~ 589 (608)
+++. .++++|+|..-..--||.+.+|+||+..|++.+..|++++.|||++|+|+..-.
T Consensus 336 ~ka~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~~ 397 (400)
T KOG0357|consen 336 VKARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPGE 397 (400)
T ss_pred hHHHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCCC
Confidence 9753 578999999887888999999999999999999999999999999999986543
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.95 E-value=2.9e-27 Score=234.73 Aligned_cols=191 Identities=36% Similarity=0.486 Sum_probs=168.4
Q ss_pred HHHHHHHhhcC-----ChhHHHHHHHHHHHhhcc------CCcEEE--ecCCccccceeeeeeeEEeecccCCccccCcc
Q 007313 204 ELADVAAVSAG-----NNYEVGNMIAEAMSKVGR------KGVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSE 270 (608)
Q Consensus 204 ~l~~va~ts~~-----~~~~ls~Li~eAi~~vg~------~g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~ 270 (608)
.|.++|+++++ +++.+++++++|+..+++ .+.|.+ .+|++++|| ++++|++|+++|.+|+|
T Consensus 3 ~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~m----- 76 (209)
T cd03333 3 LLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPYM----- 76 (209)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCCC-----
Confidence 57899999988 789999999999999987 344444 689999999 89999999999999874
Q ss_pred cCceeccCeeEEEeecCCCCHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhH
Q 007313 271 KMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL 350 (608)
Q Consensus 271 ~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L 350 (608)
+.+++||+|++++++++. +|+++++|++.++++|..+ +|++|+ ++++++|
T Consensus 77 --~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~------~I~~v~-----~~~~~~l 126 (209)
T cd03333 77 --PKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKA------GIMAVR-----RVKKEDL 126 (209)
T ss_pred --CeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHC------CCEEEE-----eCCHHHH
Confidence 678999999999999876 8888888999999999885 568887 4678999
Q ss_pred HHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 007313 351 DDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLN 427 (608)
Q Consensus 351 ~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~ 427 (608)
+|||++|||++++ ++++++++.||+|++|++. ++.++++.+|..
T Consensus 127 ~~ia~~tga~ii~-----~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~---------------------------- 173 (209)
T cd03333 127 ERIARATGATIVS-----SLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG---------------------------- 173 (209)
T ss_pred HHHHHHHCCEEec-----ccccCChhhceeeeEEEEEEECCeEEEEEEcCCC----------------------------
Confidence 9999999999999 6888889999999999864 456888888754
Q ss_pred HHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 007313 428 ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEE 470 (608)
Q Consensus 428 er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~ 470 (608)
+..|||+|||+|+.+++|.||+++||++++++++++
T Consensus 174 -------~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 174 -------GKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred -------CCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 358999999999999999999999999999999874
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.94 E-value=3.1e-25 Score=227.33 Aligned_cols=198 Identities=20% Similarity=0.184 Sum_probs=167.7
Q ss_pred ChhHHHHHHHHHHHhhccC---C-------cEE--EecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 215 NNYEVGNMIAEAMSKVGRK---G-------VVT--LEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 215 ~~~~ls~Li~eAi~~vg~~---g-------~I~--v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
+.++|++++++|+..+.++ + .|+ ..+|++++|| ++++|++|++.+.++ .|++.++||+|+
T Consensus 19 ~~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~-------~m~~~i~n~kIl 90 (261)
T cd03334 19 WLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHK-------RMPSKIKNPRIL 90 (261)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCc-------cCCcccCCCcEE
Confidence 4689999999999998532 1 233 3699999999 899999999998775 477889999999
Q ss_pred EeecCCCCH------H-----------HHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 283 LVDKKITNA------R-----------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 283 l~d~~I~~~------~-----------~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
+++++++.. . .+.+.++++.+.|+++||++++|++.++++|.++ +|++|+ ++
T Consensus 91 ll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~------gI~~v~-----~v 159 (261)
T cd03334 91 LLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEA------GITLVL-----NV 159 (261)
T ss_pred EEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHC------CCEEEE-----ec
Confidence 999986332 1 2456789999999999999999999999999887 467776 66
Q ss_pred cchhHHHHHHHhCCeEeeccCCcc-ccCCCCCCCcceeEEEE---cC-----CeEEEEcCCCChhHHHHHHHHHHHHHHh
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVVL---TK-----DTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~i---~~-----~~~~~i~~~~~~~~i~~ri~~l~~~l~~ 416 (608)
++.+|++||++|||++++ + .+.++++.||+|+.|++ ++ +++++|.+|+.+
T Consensus 160 ~~~dl~rIa~~tGa~ii~-----~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~---------------- 218 (261)
T cd03334 160 KPSVLERISRCTGADIIS-----SMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE---------------- 218 (261)
T ss_pred CHHHHHHHHHHhCCEEec-----ChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC----------------
Confidence 689999999999999999 5 34788899999999975 33 589999998653
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC
Q 007313 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG 471 (608)
Q Consensus 417 ~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g 471 (608)
..|||+|||+|+..++|.||.++||+++++++..++
T Consensus 219 -------------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 -------------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred -------------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 489999999999999999999999999999998775
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.04 E-value=2.1e-09 Score=127.06 Aligned_cols=206 Identities=18% Similarity=0.213 Sum_probs=160.3
Q ss_pred ChhHHHHHHHHHHHhhccC----------Cc--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 215 NNYEVGNMIAEAMSKVGRK----------GV--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 215 ~~~~ls~Li~eAi~~vg~~----------g~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
|.+.+..|+.+|...+.++ +. ++.+.|+...|| +++.|+++.+...+ +.|..++++|+|+
T Consensus 333 W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~-------k~M~~~~e~pril 404 (1598)
T KOG0230|consen 333 WLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAH-------KRMATKYENPRIL 404 (1598)
T ss_pred HHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhh-------hhhhhhccCCceE
Confidence 3577888999999998775 12 445788889999 99999999998665 4577789999999
Q ss_pred EeecCC---------CCHH--------HHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 283 LVDKKI---------TNAR--------DLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 283 l~d~~I---------~~~~--------~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
++.+.+ .+.+ .+...+.++...+.++|++.+.|++.|..+|... |+.-+. ++
T Consensus 405 ll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lvl--------nv 473 (1598)
T KOG0230|consen 405 LLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLVL--------NV 473 (1598)
T ss_pred EEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEEE--------ec
Confidence 998753 2322 2345677888889999999999999999988764 333222 77
Q ss_pred cchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEc--------CCeEEEEcCCCChhHHHHHHHHHHHHHHhh
Q 007313 346 KSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT--------KDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (608)
Q Consensus 346 ~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~--------~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~ 417 (608)
+...|+||+++|||.|++ +++.++...||+|..+++. ...++||++|..+
T Consensus 474 K~s~leRIsR~tga~I~~-----siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~----------------- 531 (1598)
T KOG0230|consen 474 KRSLLERISRCTGADIVP-----SVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKP----------------- 531 (1598)
T ss_pred cHHHHHHHHHHhcCceec-----chhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCC-----------------
Confidence 889999999999999998 6888999999999998753 2345678888654
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHH-HHcCcccccchH
Q 007313 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAA-VEEGIVVGGGCT 479 (608)
Q Consensus 418 ~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~a-l~~gvVpGGGa~ 479 (608)
--|||++||.+..++.+.|+-++-.+-++.+. ++.-++.-=|+.
T Consensus 532 ------------------lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~as 576 (1598)
T KOG0230|consen 532 ------------------LGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGAS 576 (1598)
T ss_pred ------------------CCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCc
Confidence 25899999999999999999998888777654 343355544443
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=97.03 E-value=0.0011 Score=74.74 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=71.6
Q ss_pred HHHHHHHHHHcCCC-EEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhH-HHHHHHhCCeEeeccCCcccc
Q 007313 294 LINVLEDAIRGAYP-ILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYL-DDIAILTGGTVIRDEVGLALD 371 (608)
Q Consensus 294 l~~~le~~~~~~~~-lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L-~~ia~~tGa~ii~~~~~~~l~ 371 (608)
+..+++++.+.+.+ +++++++|+|.++++|..+ .|.++ +++.++++ ++|+.+|||++++ .++
T Consensus 259 l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~------~Ilt~-----~~v~~~dl~~~l~~~~ga~~v~-----~~~ 322 (524)
T COG0459 259 LATLVVNILRGGANVVVVKAPGIDDLAKAYLEDI------AILTG-----RRVKKEDLGERLAKLGGAKIVS-----VLK 322 (524)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhh------cceec-----ceecchhhHHHHHHccCceEEe-----ecc
Confidence 34567788899999 8899999999999999887 34544 46668888 7999999999999 689
Q ss_pred CCCCCCCcc--eeEEEE---cCCeEEEEcCCC
Q 007313 372 KVGKEVLGN--ASKVVL---TKDTTTIVGDGS 398 (608)
Q Consensus 372 ~~~~~~lG~--~~~v~i---~~~~~~~i~~~~ 398 (608)
+.++..+|. |+.|+. ++++++++.+|.
T Consensus 323 d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~ 354 (524)
T COG0459 323 DLTTIVLGEGAAGLVEETKTGDYDMEKLQERK 354 (524)
T ss_pred cCceeecCccccceEEEeeccchhhhhhhhhh
Confidence 999999999 999964 355666666553
No 47
>smart00574 POX domain associated with HOX domains.
Probab=61.99 E-value=48 Score=30.96 Aligned_cols=60 Identities=22% Similarity=0.207 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhh
Q 007313 420 DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKE 492 (608)
Q Consensus 420 ~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~ 492 (608)
..|+..++.+.++| -.+++|.++|++-...-++..+..- .|+|.|++-.+.+-+|+..+.
T Consensus 69 ~~~r~e~q~kk~kL-------------l~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~Sr 129 (140)
T smart00574 69 TAERQELQRKKAKL-------------LSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISR 129 (140)
T ss_pred hhHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 34566677777776 2567888888887777777776664 789999999998888877664
No 48
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=51.29 E-value=4.8 Score=45.74 Aligned_cols=60 Identities=27% Similarity=0.423 Sum_probs=51.0
Q ss_pred CCCEEEEcccchH-----HHHHHHHHHhhcccc----eEEEeecCCcCCCcchhHHHHHHHhCCeEeecc
Q 007313 305 AYPILIIAEDIEQ-----EALATLVVNKLRGAL----KIAALKAPGFGERKSQYLDDIAILTGGTVIRDE 365 (608)
Q Consensus 305 ~~~lvIia~~I~~-----~al~~L~~nk~~g~~----~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~ 365 (608)
..++.|..+++++ +++..++.++++++. ++++++.| +++...++|++.+++++.++..++
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~d 315 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDED 315 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHHH
Confidence 4477888888888 888889999988755 88999988 999999999999999998887754
No 49
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=49.90 E-value=79 Score=29.60 Aligned_cols=58 Identities=26% Similarity=0.277 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhh
Q 007313 422 EREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKE 492 (608)
Q Consensus 422 e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~ 492 (608)
++..++.+.++|- .+++|.++|++-...-.+..+..- -|.|.|++-.+.+-+|+..+.
T Consensus 71 ~~~e~q~kK~KLl-------------~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamSr 129 (140)
T PF07526_consen 71 ERQELQRKKAKLL-------------SMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMSR 129 (140)
T ss_pred hHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHHH
Confidence 4555666666652 466777777776666666666554 788999999998888887764
No 50
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=36.18 E-value=1.3e+02 Score=27.49 Aligned_cols=42 Identities=24% Similarity=0.346 Sum_probs=30.1
Q ss_pred HHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCC
Q 007313 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGER 345 (608)
Q Consensus 296 ~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~ 345 (608)
.+.+.+++.|+++||+. .+.+.+++.|... .|-+++.++ +++
T Consensus 56 ~~a~~l~~~gvdvvi~~-~iG~~a~~~l~~~------GIkv~~~~~-~~V 97 (121)
T COG1433 56 RIAELLVDEGVDVVIAS-NIGPNAYNALKAA------GIKVYVAPG-GTV 97 (121)
T ss_pred HHHHHHHHcCCCEEEEC-ccCHHHHHHHHHc------CcEEEecCC-CCH
Confidence 35788899999999976 5888888888664 334555555 444
No 51
>PF07818 HCNGP: HCNGP-like protein; InterPro: IPR012479 This family comprises sequences bearing significant similarity to the mouse transcriptional regulator protein HCNGP (Q02614 from SWISSPROT). This protein is localised to the nucleus and is thought to be involved in the regulation of beta-2-microglobulin genes.
Probab=31.98 E-value=63 Score=28.27 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=44.7
Q ss_pred HHHHHHHHcCCChHHHHHHHHhcCCCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 007313 513 PLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKT 577 (608)
Q Consensus 513 i~~~La~NaG~d~~~vi~kL~~~~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~ 577 (608)
+-..|..|.++..-.++++|.. ++||| +++-.+-..||||...-.++...++.-++.
T Consensus 30 fN~~L~~s~~frNP~i~ekLi~----~~~Id----e~gTn~p~~i~dP~~~~~~~y~e~L~k~Qk 86 (96)
T PF07818_consen 30 FNDRLQNSKSFRNPSILEKLIE----FFGID----EYGTNFPKDIFDPHGFPEEDYYEELAKAQK 86 (96)
T ss_pred HHHHHHHccccCChHHHHHHHH----HcCCC----cccCCCChhhcCCCCCCHHHHHHHHHHHHH
Confidence 3456778888888888899975 67887 467777888999999999988887765543
No 52
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=24.50 E-value=3.4e+02 Score=23.16 Aligned_cols=54 Identities=17% Similarity=0.202 Sum_probs=32.4
Q ss_pred HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCe
Q 007313 297 VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT 360 (608)
Q Consensus 297 ~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ 360 (608)
.++.+.+....+|++++|+++....-+..---+..+.++-| ..+++|.++||-.
T Consensus 21 t~Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~Ip~v~V----------~s~~~LGkAcgi~ 74 (84)
T PRK13600 21 TLKALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSFF----------KSKHALGKHVGIN 74 (84)
T ss_pred HHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE----------CCHHHHHHHhCCC
Confidence 44555556678999999999876664432111112233322 2367888888855
Done!