Query 007313
Match_columns 608
No_of_seqs 156 out of 1473
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 22:38:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007313.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007313hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 5E-126 2E-130 1057.2 51.3 525 63-592 2-527 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 6E-125 2E-129 1049.5 55.6 540 63-606 2-543 (543)
3 1iok_A Chaperonin 60; chaperon 100.0 3E-126 9E-131 1060.2 41.4 539 63-605 3-542 (545)
4 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-125 4E-130 1052.5 41.6 527 63-596 2-529 (546)
5 3p9d_C T-complex protein 1 sub 100.0 9E-104 3E-108 884.7 38.7 492 64-591 12-589 (590)
6 3ruv_A Chaperonin, CPN; double 100.0 2E-102 6E-107 871.0 47.5 465 64-594 12-525 (543)
7 1q3q_A Thermosome alpha subuni 100.0 2E-102 8E-107 870.7 47.3 480 63-608 15-548 (548)
8 3ko1_A Chaperonin; 9-fold symm 100.0 5E-101 2E-105 859.4 49.3 466 63-594 22-539 (553)
9 3p9d_A T-complex protein 1 sub 100.0 9E-102 3E-106 867.4 41.2 471 63-594 16-554 (559)
10 1a6d_A Thermosome (alpha subun 100.0 3E-101 1E-105 861.2 42.8 462 63-591 14-525 (545)
11 3iyg_B T-complex protein 1 sub 100.0 5E-100 2E-104 846.2 51.9 460 64-590 3-513 (513)
12 1a6d_B Thermosome (beta subuni 100.0 3E-100 9E-105 853.9 47.5 466 63-594 13-529 (543)
13 3iyg_H T-complex protein 1 sub 100.0 3.5E-99 1E-103 839.4 51.3 456 72-588 10-514 (515)
14 3p9d_D T-complex protein 1 sub 100.0 2E-100 7E-105 851.6 38.7 464 63-588 11-528 (528)
15 3p9d_G T-complex protein 1 sub 100.0 1E-100 3E-105 857.2 35.2 467 64-594 17-533 (550)
16 3iyg_A T-complex protein 1 sub 100.0 1.3E-98 4E-103 837.8 50.0 464 65-589 4-529 (529)
17 3p9d_B T-complex protein 1 sub 100.0 2E-100 6E-105 852.6 33.4 465 63-594 9-524 (527)
18 3iyg_E T-complex protein 1 sub 100.0 1.1E-97 4E-102 828.2 52.1 458 64-587 3-514 (515)
19 3iyg_D T-complex protein 1 sub 100.0 8.8E-98 3E-102 829.1 49.6 457 66-588 6-518 (518)
20 3p9d_E T-complex protein 1 sub 100.0 6.6E-98 2E-102 836.4 44.3 468 63-590 37-560 (562)
21 3iyg_G T-complex protein 1 sub 100.0 1.1E-96 4E-101 819.7 50.6 453 72-588 8-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 9.5E-97 3E-101 820.2 49.8 451 72-587 10-511 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 7.7E-96 3E-100 812.9 48.2 455 66-587 5-516 (517)
24 3p9d_H T-complex protein 1 sub 100.0 3.7E-97 1E-101 831.2 31.0 461 72-596 25-556 (568)
25 3p9d_F T-complex protein 1 sub 100.0 1.4E-95 5E-100 816.2 33.8 460 65-590 11-539 (546)
26 3aq1_B Thermosome subunit; gro 100.0 2.8E-93 9.4E-98 789.9 39.5 439 101-604 1-491 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.9E-49 6.6E-54 376.9 15.7 193 248-440 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 4.8E-48 1.6E-52 368.0 17.0 190 250-439 11-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 7.2E-37 2.5E-41 278.1 13.9 144 253-396 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2.4E-21 8.1E-26 186.4 12.9 146 244-448 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.7 5.9E-18 2E-22 159.7 12.7 127 251-400 1-154 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5.3e-126 Score=1057.20 Aligned_cols=525 Identities=54% Similarity=0.834 Sum_probs=512.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| .++|+.+++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+|||||+++|++
T Consensus 2 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (547)
T 1kp8_A 2 AKDVKFG--NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASK 79 (547)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++. +|.++|++|++++++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~ 159 (547)
T 1kp8_A 80 ANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGK 159 (547)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHH
T ss_pred hccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 999999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
|++||+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 160 liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i 239 (547)
T 1kp8_A 160 LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV 239 (547)
T ss_dssp HHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+|
T Consensus 240 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 240 AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQA 319 (547)
T ss_dssp HGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
++|+++++++++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++|||
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl 399 (547)
T 1kp8_A 320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL 399 (547)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++|+++++|+|||||++|++++.+|++++. .++.+ ++++++|++||+.||++||+|||+|+.+++.+|+.. +.++|
T Consensus 400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~-q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G 476 (547)
T 1kp8_A 400 HATRAAVEEGVVAGGGVALIRVASKLADLRG-QNADQ-NVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYG 476 (547)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SSHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEE
T ss_pred HHHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEe
Confidence 9999999999999999999999999998876 55554 589999999999999999999999999999999875 57899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 592 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 592 (608)
||+.+|+|.||++.|||||++||+++|++|+++|++|||+|++|..+|+++
T Consensus 477 ~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 477 YNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred EeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 999999999999999999999999999999999999999999999988766
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=6.4e-125 Score=1049.51 Aligned_cols=540 Identities=54% Similarity=0.838 Sum_probs=513.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| .++|..|++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+|||||+++|++
T Consensus 2 ~k~~~~g--~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 79 (543)
T 1we3_A 2 AKILVFD--EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASK 79 (543)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++. +|.+||++|++ +++|++
T Consensus 80 qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~ 158 (543)
T 1we3_A 80 TNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGK 158 (543)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHH
T ss_pred hheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999877 99999999998 899999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
|++||+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+|+++|++|+++++++++++++
T Consensus 159 li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i 238 (543)
T 1we3_A 159 LIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQV 238 (543)
T ss_dssp HHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+|
T Consensus 239 ~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a 318 (543)
T 1we3_A 239 AQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRA 318 (543)
T ss_dssp HTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEE
T ss_pred HhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
+.|+++++++++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl 398 (543)
T 1we3_A 319 ERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDAL 398 (543)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-CCce
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-NHKY 540 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~-~~~~ 540 (608)
+++|+++++|+|||||++|++++.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++
T Consensus 399 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 477 (543)
T 1we3_A 399 NATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEA-TGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRY 477 (543)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTE
T ss_pred HHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCE
Confidence 99999999999999999999999999999876666655 899999999999999999999999999999999753 4689
Q ss_pred eeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCCC
Q 007313 541 GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 606 (608)
Q Consensus 541 G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~~ 606 (608)
|||+.+|+|.||++.|||||+.||+++|++|+++|++|||+|++|..+|+++|++|++.||++|||
T Consensus 478 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~ 543 (543)
T 1we3_A 478 GFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKESTPASAGAGDMDF 543 (543)
T ss_dssp EEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC---------------
T ss_pred EEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999887766555555666554
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.6e-126 Score=1060.16 Aligned_cols=539 Identities=51% Similarity=0.814 Sum_probs=470.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| .++|..+++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+||+|||||+++|++
T Consensus 3 ~k~~~~g--~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~ 80 (545)
T 1iok_A 3 AKEVKFN--SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASR 80 (545)
T ss_dssp CEEEEEH--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHH
T ss_pred chhhhcc--HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHh
Confidence 8999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++. +|.++|++|++++++|++
T Consensus 81 qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~ 160 (545)
T 1iok_A 81 TNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQ 160 (545)
T ss_dssp GGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHH
T ss_pred hccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
|++||+.+++++|+|++++|++++|++++++||+|+++|.||||++++++|+++++||+||++|++|+++++++++++++
T Consensus 161 li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i 240 (545)
T 1iok_A 161 QIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESV 240 (545)
T ss_dssp HHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC--------
T ss_pred HHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+||++++++|+|||++|||+++++++|++++++++++||+|
T Consensus 241 ~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a 320 (545)
T 1iok_A 241 IQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRA 320 (545)
T ss_dssp ---CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEE
T ss_pred HhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
++|+++++++++|++|++++.+++|++||+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||+++|||
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl 400 (545)
T 1iok_A 321 KKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDAL 400 (545)
T ss_dssp EEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
+++|+++++|+|||||++|++++.+|++++. .++.+ ++++++|++||+.||++||+|||+|+.+++.+|+..|++++|
T Consensus 401 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G 478 (545)
T 1iok_A 401 NATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANSDQ-DAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFG 478 (545)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSHHH-HHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEE
T ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCchH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCee
Confidence 9999999999999999999999999998876 55555 489999999999999999999999999999999987778899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 605 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~ 605 (608)
||+.+|+|.||++.|||||++||+++|++|+++|++||++|++|...|++++++++.++|++||
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~~~~~~~~~~~~ 542 (545)
T 1iok_A 479 FNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAPAGGMPDMGGMG 542 (545)
T ss_dssp EETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC----------------
T ss_pred EeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999887654421223455555
No 4
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-125 Score=1052.49 Aligned_cols=527 Identities=55% Similarity=0.822 Sum_probs=433.9
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|+|.|| +++|+.|++|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||++|+||||++++|++
T Consensus 2 ~k~~~~~--~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~ 79 (546)
T 3rtk_A 2 AKTIAYD--EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKK 79 (546)
T ss_dssp -------------------------------------------------------------CCCHHHHHHHHHHHHHHTS
T ss_pred Cceeecc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHh
Confidence 7999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCch-HHHHHHHhhcCChhHHHH
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVEDS-ELADVAAVSAGNNYEVGN 221 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~l~~va~ts~~~~~~ls~ 221 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +|.+||++|++ ++++++
T Consensus 80 qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~ 158 (546)
T 3rtk_A 80 TDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGD 158 (546)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHH
T ss_pred hhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999977 99999999998 889999
Q ss_pred HHHHHHHhhccCCcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHH
Q 007313 222 MIAEAMSKVGRKGVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDA 301 (608)
Q Consensus 222 Li~eAi~~vg~~g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~ 301 (608)
|++||+.+++++|+|+++.+....+.+++++||+|+++|.||||++++++|+++++||+|+++|++|+++++++++++++
T Consensus 159 liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I 238 (546)
T 3rtk_A 159 LIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKV 238 (546)
T ss_dssp HHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHH
T ss_pred HHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHH
Confidence 99999999999999999888776555599999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcce
Q 007313 302 IRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNA 381 (608)
Q Consensus 302 ~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~ 381 (608)
.+.|+|||||+++|+++|+++|+.|+++|+++|+|||+|+||+.++++|+|||++|||+++++++|++++++++++||+|
T Consensus 239 ~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a 318 (546)
T 3rtk_A 239 IGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKA 318 (546)
T ss_dssp HTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEE
T ss_pred HhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 382 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 382 ~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
++|+++++++++|++|++++.++.|++||++++++++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl 398 (546)
T 3rtk_A 319 RKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAV 398 (546)
T ss_dssp EEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHH
T ss_pred EEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCcccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcCCCcee
Q 007313 462 NATKAAVEEGIVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYG 541 (608)
Q Consensus 462 ~a~~~al~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~~~~~G 541 (608)
|++|+++++|+|||||++|++++.+|++++ .++.+| +++++|++||+.||++||+|||+|+.+++.+|++. ...+|
T Consensus 399 ~a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G 474 (546)
T 3rtk_A 399 RNAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGDEA-TGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHG 474 (546)
T ss_dssp HHHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTTHH-HHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEE
T ss_pred HHHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEe
Confidence 999999999999999999999999999887 556555 89999999999999999999999999999999875 45699
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 007313 542 YNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 596 (608)
Q Consensus 542 ~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 596 (608)
||+.+|+|.||++.|||||+.||+++|++|+|+|++|||+|++|..+|+++|++|
T Consensus 475 ~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~ 529 (546)
T 3rtk_A 475 LNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKASV 529 (546)
T ss_dssp CCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC--------------
T ss_pred EcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999988776533
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.7e-104 Score=884.73 Aligned_cols=492 Identities=19% Similarity=0.282 Sum_probs=424.1
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
.+-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~q 85 (590)
T 3p9d_C 12 QERTTG--RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRTQ 85 (590)
T ss_dssp CCBCTT--HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTTH
T ss_pred cchhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHhh
Confidence 456678 999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHH-HhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC-----
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKV-VAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~l-i~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 214 (608)
|+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++. . +|.++|+||++
T Consensus 86 d~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~ 165 (590)
T 3p9d_C 86 DEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVI 165 (590)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTG
T ss_pred hhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999 9999999999999999999999999999999875 3 89999998864
Q ss_pred -ChhHHHHHHHHHHHhhccCCc----------------EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCcee
Q 007313 215 -NNYEVGNMIAEAMSKVGRKGV----------------VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVE 275 (608)
Q Consensus 215 -~~~~ls~Li~eAi~~vg~~g~----------------I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~ 275 (608)
++++|++|++||+.++++++. |++ .+|++++|+ ++++||+|++++.+| +|+++
T Consensus 166 ~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~-------~m~~~ 237 (590)
T 3p9d_C 166 HWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP-------KMSRH 237 (590)
T ss_dssp GGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT-------TSCSC
T ss_pred ccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC-------CCcce
Confidence 479999999999999998653 222 469999998 999999999998776 37889
Q ss_pred ccCeeEEEeecC-------------CCCHHHHHHH-----------HHHHHHcCCCEEEEcccchHHHHHHHHHHhhccc
Q 007313 276 YENCKLLLVDKK-------------ITNARDLINV-----------LEDAIRGAYPILIIAEDIEQEALATLVVNKLRGA 331 (608)
Q Consensus 276 ~~n~kIll~d~~-------------I~~~~~l~~~-----------le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~ 331 (608)
++||+|+++|++ |++++++.++ ++++.+.|++|||++++|+++|+++|.+++
T Consensus 238 ~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~---- 313 (590)
T 3p9d_C 238 IENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG---- 313 (590)
T ss_dssp EESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT----
T ss_pred eeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc----
Confidence 999999999984 4566666554 468889999999988899999999999874
Q ss_pred ceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcc-eeEEE---EcCCeEEEEcCCCChhH-----
Q 007313 332 LKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVV---LTKDTTTIVGDGSTQDA----- 402 (608)
Q Consensus 332 ~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~---i~~~~~~~i~~~~~~~~----- 402 (608)
|+ .|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|.+|++++.
T Consensus 314 --I~-----av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~ 381 (590)
T 3p9d_C 314 --CS-----VLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWS 381 (590)
T ss_dssp --CC-----CCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------
T ss_pred --ce-----eeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcccccccc
Confidence 33 57799999999999999999999 799999999999 99996 68899999999999888
Q ss_pred ---------------------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007313 403 ---------------------VSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 461 (608)
Q Consensus 403 ---------------------i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl 461 (608)
|+.|++||+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||+++|||
T Consensus 382 ~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl 456 (590)
T 3p9d_C 382 HPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAM 456 (590)
T ss_dssp ---------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHH
T ss_pred ccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999966 47899999999999999999999999999999
Q ss_pred HHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C
Q 007313 462 NATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N 537 (608)
Q Consensus 462 ~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~ 537 (608)
+++|+++++| +||||||+|++++.+|.+++.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| +
T Consensus 457 ~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~ 535 (590)
T 3p9d_C 457 AVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQ-WPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGN 535 (590)
T ss_dssp HHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTH-HHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 9999999995 9999999999999999999888877766 899999999999999999999999999999998753 5
Q ss_pred CceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCC
Q 007313 538 HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP 591 (608)
Q Consensus 538 ~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 591 (608)
+++|||+.+|+|.||++.|||||+.||+++|++|+|+|++|||+|++|...|+.
T Consensus 536 ~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 536 FTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp TTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred CCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 789999999999999999999999999999999999999999999999887753
No 6
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.6e-102 Score=871.04 Aligned_cols=465 Identities=26% Similarity=0.376 Sum_probs=427.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
.+-.+| .++|..|++||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||. ||||+++|++|
T Consensus 12 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 85 (543)
T 3ruv_A 12 MKRYMG--RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQ 85 (543)
T ss_dssp EEEEET--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHH
T ss_pred cchhcc--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHH
Confidence 455567 899999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC-----
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN----- 215 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~----- 215 (608)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. +|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~ 165 (543)
T 3ruv_A 86 EKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEK 165 (543)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGG
T ss_pred HhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999987 45 899999999864
Q ss_pred -hhHHHHHHHHHHHhhccC-Cc-----EEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeec
Q 007313 216 -NYEVGNMIAEAMSKVGRK-GV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 286 (608)
Q Consensus 216 -~~~ls~Li~eAi~~vg~~-g~-----I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~ 286 (608)
+++|++|++||+.+++++ |. |+++ .|++++|+ ++++||+|+++|.|||| +++++||||+++|+
T Consensus 166 ~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~kIll~~~ 237 (543)
T 3ruv_A 166 AKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAKIALLNC 237 (543)
T ss_dssp CCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEEEEEESS
T ss_pred hHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcEEEEEcc
Confidence 799999999999999987 75 7664 78899988 99999999999999985 56899999999998
Q ss_pred C-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCc
Q 007313 287 K-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGF 342 (608)
Q Consensus 287 ~-------------I~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~ 342 (608)
+ |+++++ +.++++++.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 238 ~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~---- 307 (543)
T 3ruv_A 238 AIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR---- 307 (543)
T ss_dssp CBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC----
T ss_pred cccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe----
Confidence 4 566665 567789999999999999999999999999864 456665
Q ss_pred CCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhh
Q 007313 343 GERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQ 419 (608)
Q Consensus 343 g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~ 419 (608)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|+++
T Consensus 308 -~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------- 362 (543)
T 3ruv_A 308 -RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------- 362 (543)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------------
T ss_pred -eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------------
Confidence 67899999999999999999 799999999999999985 48899999999874
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhh
Q 007313 420 DYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDE 498 (608)
Q Consensus 420 ~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~e 498 (608)
..|||+|||+|+.+++|+||++|||||++|+++++| +||||||+|++|+.+|++++.++++.+
T Consensus 363 ----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 426 (543)
T 3ruv_A 363 ----------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGRE 426 (543)
T ss_dssp ----------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTH
T ss_pred ----------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHH
Confidence 479999999999999999999999999999999999 999999999999999999998887877
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHH
Q 007313 499 EKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 574 (608)
Q Consensus 499 q~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~ 574 (608)
| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|+|+
T Consensus 427 q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~ 505 (543)
T 3ruv_A 427 Q-LAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAES 505 (543)
T ss_dssp H-HHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHH
Confidence 6 899999999999999999999999999999998754 37899999999999999999999999999999999999
Q ss_pred HHHHhchhHHhhccCCCCCC
Q 007313 575 AKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 575 a~~iL~iD~iI~~~~~~~~~ 594 (608)
|++|||+|++|...|+.+|+
T Consensus 506 a~~iL~id~ii~~~~~~~~~ 525 (543)
T 3ruv_A 506 TEMLLRIDDVIAAEKLRGAP 525 (543)
T ss_dssp HHHHHTCCEEEEEC------
T ss_pred HHHHHhHHhheecCccCCCC
Confidence 99999999999999887654
No 7
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.3e-102 Score=870.67 Aligned_cols=480 Identities=24% Similarity=0.355 Sum_probs=433.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
.+++.|| .++|..|++|++.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||. ||||+++|++
T Consensus 15 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 88 (548)
T 1q3q_A 15 GTQRYVG--RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKT 88 (548)
T ss_dssp TCEEEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred Ccceech--HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 5788899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC-----
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 214 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. . +|.++|+||++
T Consensus 89 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~ 168 (548)
T 1q3q_A 89 QDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAE 168 (548)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999875 4 89999998753
Q ss_pred -ChhHHHHHHHHHHHhhccC--C-------cEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 215 -NNYEVGNMIAEAMSKVGRK--G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 215 -~~~~ls~Li~eAi~~vg~~--g-------~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
++++|++|++||+.+++++ | +|+++ +|++++|| ++++||+|+++|.|||| +++++||+|+
T Consensus 169 ~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 240 (548)
T 1q3q_A 169 SHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIA 240 (548)
T ss_dssp GGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEE
T ss_pred cchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEE
Confidence 5799999999999999876 4 67776 99999999 99999999999999986 4578999999
Q ss_pred EeecC-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEee
Q 007313 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (608)
Q Consensus 283 l~d~~-------------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk 338 (608)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||+
T Consensus 241 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 314 (548)
T 1q3q_A 241 LINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKY------GIMAVR 314 (548)
T ss_dssp EECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHC------CcEEEc
Confidence 99998 7888876 78899999999999999999999999999998 357775
Q ss_pred cCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHH
Q 007313 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (608)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~ 415 (608)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|++
T Consensus 315 -----~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 368 (548)
T 1q3q_A 315 -----RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN---------------- 368 (548)
T ss_dssp -----SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS----------------
T ss_pred -----cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 88899999999999999999 799999999999999986 4899999999876
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcC
Q 007313 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 416 ~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
+++|||+|||+|+.+++|+||++|||++++|+++++| +|||||++|++|+.+|++++.+.
T Consensus 369 -------------------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~ 429 (548)
T 1q3q_A 369 -------------------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQV 429 (548)
T ss_dssp -------------------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhc
Confidence 3689999999999999999999999999999999999 99999999999999999998777
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHH
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A 571 (608)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|+|.||++.|||||+.||+++|++|
T Consensus 430 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 508 (548)
T 1q3q_A 430 GGKEA-LAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSA 508 (548)
T ss_dssp CHHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHH
Confidence 77666 899999999999999999999999999999999653 46899999999999999999999999999999999
Q ss_pred HHHHHHHhchhHHhhccCCCCCCC---CCCCCCCCCCCCC
Q 007313 572 SSVAKTFLMSDCVVVEIKEPEPAM---PAGNPMDNSGYGY 608 (608)
Q Consensus 572 ~e~a~~iL~iD~iI~~~~~~~~~~---~~~~~~~~~~~~~ 608 (608)
+|+|++|||+|++|...|++++.+ +++++|+||.+||
T Consensus 509 ~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~~g~~~~~ 548 (548)
T 1q3q_A 509 SEAAIMILRIDDVIAAKATKPEGGQGGGMPGGMGGMDMGM 548 (548)
T ss_dssp HHHHHHHHTCCEEEECCC----------------------
T ss_pred HHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCCCCCCCC
Confidence 999999999999999988764321 1234566666664
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=5.1e-101 Score=859.45 Aligned_cols=466 Identities=22% Similarity=0.372 Sum_probs=424.8
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
..+..|| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||. ||||+++|++
T Consensus 22 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 95 (553)
T 3ko1_A 22 GSSRTYG--KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLLVQIAKG 95 (553)
T ss_dssp ------C--HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHHHHHHHT
T ss_pred Ccccchh--HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHHHHHhhC
Confidence 3456678 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC----
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 96 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~ 175 (553)
T 3ko1_A 96 QDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVA 175 (553)
T ss_dssp CSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCC
T ss_pred CcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999875
Q ss_pred --hhHHHHHHHHHHHhhccC--Cc-------EEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 216 --NYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 216 --~~~ls~Li~eAi~~vg~~--g~-------I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
+++|++|++||+.+++++ |+ |+++ .|++++|+ ++++||+|+++|.|||| +++++||||+
T Consensus 176 ~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 247 (553)
T 3ko1_A 176 GAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-------PKRLENAKIA 247 (553)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS-------CSCCBSCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC-------ccccccceEE
Confidence 799999999999999986 66 7764 78899988 99999999999999985 5679999999
Q ss_pred Eeec-------------CCCCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEee
Q 007313 283 LVDK-------------KITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (608)
Q Consensus 283 l~d~-------------~I~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk 338 (608)
++|+ +|+++++ +.++++++.+.|+||||++++|+++++++|.++ +|++|+
T Consensus 248 l~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~ 321 (553)
T 3ko1_A 248 LIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR 321 (553)
T ss_dssp EECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC
T ss_pred EecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh
Confidence 9998 4678876 456789999999999999999999999999865 356665
Q ss_pred cCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHH
Q 007313 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (608)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~ 415 (608)
++++++|+|||++|||++++ +++++++++||+|+.|++. ++++++|.+|+++
T Consensus 322 -----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------------- 376 (553)
T 3ko1_A 322 -----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------------- 376 (553)
T ss_dssp -----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------------
T ss_pred -----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------------
Confidence 67899999999999999999 7999999999999999864 8899999999874
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcC
Q 007313 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 416 ~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++
T Consensus 377 --------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 436 (553)
T 3ko1_A 377 --------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQV 436 (553)
T ss_dssp --------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHH
T ss_pred --------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhcccc
Confidence 479999999999999999999999999999999999 99999999999999999998877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C-CceeeecCCCcccccccCCcccchHHHHHHHHH
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N-HKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEH 570 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~-~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~ 570 (608)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| + +++|||+.+|+|.||++.|||||+.||+++|++
T Consensus 437 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 515 (553)
T 3ko1_A 437 GGKEQ-LAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKA 515 (553)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHH
T ss_pred CChhH-hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhh
Confidence 77776 899999999999999999999999999999999865 2 579999999999999999999999999999999
Q ss_pred HHHHHHHHhchhHHhhccCCCCCC
Q 007313 571 ASSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 571 A~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
|+++|++|||+|++|...|+++|.
T Consensus 516 A~e~a~~iL~iD~ii~~~~~~~~~ 539 (553)
T 3ko1_A 516 ATEAATLVLRIDDVVSAGKKSGGE 539 (553)
T ss_dssp HHHHHHHHHHEEEECCC-------
T ss_pred cchhheEEEehHHHHHhhhhccCC
Confidence 999999999999999999887766
No 9
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=8.5e-102 Score=867.36 Aligned_cols=471 Identities=23% Similarity=0.332 Sum_probs=435.4
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
+|++.|| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++
T Consensus 16 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 89 (559)
T 3p9d_A 16 GGEKISG--DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQ 89 (559)
T ss_dssp SCEEEET--HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHH
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHH
Confidence 7999999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccCc--h-HHHHHHHhhcCC---
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVED--S-ELADVAAVSAGN--- 215 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~-~l~~va~ts~~~--- 215 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++ +++|++. . +|.++|+||+++
T Consensus 90 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~ 169 (559)
T 3p9d_A 90 QDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKII 169 (559)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGG
T ss_pred HHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999 9999885 3 899999999875
Q ss_pred ---hhHHHHHHHHHHHhhcc-----CCc-----EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceecc--C
Q 007313 216 ---NYEVGNMIAEAMSKVGR-----KGV-----VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE--N 278 (608)
Q Consensus 216 ---~~~ls~Li~eAi~~vg~-----~g~-----I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~--n 278 (608)
+++|++|++||+.++++ ++. |++ .+|++++|+ ++++||+|+++|.|||| +++++ |
T Consensus 170 ~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n 241 (559)
T 3p9d_A 170 GADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGN 241 (559)
T ss_dssp GTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSS
T ss_pred cchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCC
Confidence 79999999999999984 244 333 359999998 99999999999999985 45788 9
Q ss_pred eeEEEeecCC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceE
Q 007313 279 CKLLLVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKI 334 (608)
Q Consensus 279 ~kIll~d~~I-------------~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i 334 (608)
|||+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|+.|+ |
T Consensus 242 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I 315 (559)
T 3p9d_A 242 VKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------I 315 (559)
T ss_dssp BCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------C
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------C
Confidence 9999999986 34433 6788999999999999999999999999999985 4
Q ss_pred EEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccc-cCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHH
Q 007313 335 AALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLAL-DKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQI 410 (608)
Q Consensus 335 ~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l-~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l 410 (608)
+||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ ++++++++|.+|++
T Consensus 316 ~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------- 379 (559)
T 3p9d_A 316 MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK----------- 379 (559)
T ss_dssp EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-----------
T ss_pred ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-----------
Confidence 6654 788999999999999999998766665 899999999999998 68999999999876
Q ss_pred HHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHH
Q 007313 411 RTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDA 489 (608)
Q Consensus 411 ~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~ 489 (608)
+++|||+|||+|+.+++|+||+++|||+++|+++++| +||||||+|++|+.+|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999 999999999999999999
Q ss_pred HhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CC------------ceeeecCCCccccccc
Q 007313 490 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NH------------KYGYNAATGNYEDLMA 554 (608)
Q Consensus 490 ~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~------------~~G~d~~~g~i~d~~~ 554 (608)
++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++ ++|||+.+|+|.||++
T Consensus 436 ~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~ 514 (559)
T 3p9d_A 436 FATTVGSREQ-LAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIH 514 (559)
T ss_dssp HHTTSCTTHH-HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTT
T ss_pred HhcccChHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhh
Confidence 9988877766 899999999999999999999999999999998753 33 7999999999999999
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCC
Q 007313 555 AGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 555 ~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
.|||||+.||+++|++|+|+|++|||+|++|...|++++.
T Consensus 515 ~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 515 AGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp SSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred ccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 9999999999999999999999999999999998776543
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.9e-101 Score=861.23 Aligned_cols=462 Identities=23% Similarity=0.365 Sum_probs=426.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
..++.|| .++|..|++|++.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||. ||||+++|++
T Consensus 14 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 87 (545)
T 1a6d_A 14 GTQREQG--KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKA 87 (545)
T ss_dssp ---CEEH--HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGC
T ss_pred cchhhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHh
Confidence 4568889 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-ch-HHHHHHHhhc------C
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSA------G 214 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~------~ 214 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +. +|.++|+||+ +
T Consensus 88 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~ 166 (545)
T 1a6d_A 88 QDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGL 166 (545)
T ss_dssp TTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCS
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999 7 45 8999999875 3
Q ss_pred ChhHHHHHHHHHHHhhccC---------CcEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEE
Q 007313 215 NNYEVGNMIAEAMSKVGRK---------GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (608)
Q Consensus 215 ~~~~ls~Li~eAi~~vg~~---------g~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll 283 (608)
++++|++|++||+.+++++ ++|+++ +|++++|| ++++||+|+++|.|||| +++++||+|++
T Consensus 167 ~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 238 (545)
T 1a6d_A 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIAL 238 (545)
T ss_dssp THHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 5799999999999999876 368876 99999999 99999999999999986 45789999999
Q ss_pred eecC-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeec
Q 007313 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (608)
Q Consensus 284 ~d~~-------------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~ 339 (608)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||+
T Consensus 239 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~- 311 (545)
T 1a6d_A 239 IDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR- 311 (545)
T ss_dssp ECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-
T ss_pred EecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-
Confidence 9998 7777765 788999999999999999999999999999984 57775
Q ss_pred CCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHh
Q 007313 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (608)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~ 416 (608)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|++
T Consensus 312 ----~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 365 (545)
T 1a6d_A 312 ----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN----------------- 365 (545)
T ss_dssp ----SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC-----------------
T ss_pred ----cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-----------------
Confidence 78899999999999999999 799999999999999986 4789999999876
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCC
Q 007313 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (608)
Q Consensus 417 ~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (608)
+++|||+|||+|+.+++|+||++|||++++|+++++| +|||||++|++|+.+|++++.+.+
T Consensus 366 ------------------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~ 427 (545)
T 1a6d_A 366 ------------------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVG 427 (545)
T ss_dssp ------------------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSC
T ss_pred ------------------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccC
Confidence 3689999999999999999999999999999999999 999999999999999999998777
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHH
Q 007313 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (608)
Q Consensus 496 ~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~ 572 (608)
+.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 428 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 506 (545)
T 1a6d_A 428 GREQ-LAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAV 506 (545)
T ss_dssp HHHH-HHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHH
Confidence 7666 899999999999999999999999999999998653 468999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHhhccCCC
Q 007313 573 SVAKTFLMSDCVVVEIKEP 591 (608)
Q Consensus 573 e~a~~iL~iD~iI~~~~~~ 591 (608)
|+|++|||+|++|...|++
T Consensus 507 e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 507 EVATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHHHTCCEEC------
T ss_pred HHHHHHHHHHHHHhcccCC
Confidence 9999999999999998876
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5e-100 Score=846.24 Aligned_cols=460 Identities=22% Similarity=0.319 Sum_probs=428.0
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCC--CCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKY--GAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~--g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~ 141 (608)
.+-.|| .++|..|++||+.|+++|++||||+||||||++++ |+|+|||||+||||+|+++||. ||||+++|+
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~ 76 (513)
T 3iyg_B 3 ADEERA--ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSR 76 (513)
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHH
Confidence 345678 99999999999999999999999999999999999 9999999999999999999997 999999999
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-----ch-HHHHHHHhhcC-
Q 007313 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-----DS-ELADVAAVSAG- 214 (608)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~-~l~~va~ts~~- 214 (608)
+||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. +|.++|+||++
T Consensus 77 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslss 156 (513)
T 3iyg_B 77 VQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSS 156 (513)
T ss_pred HhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999987 34 89999998864
Q ss_pred -----ChhHHHHHHHHHHHhhccC---CcEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 215 -----NNYEVGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 215 -----~~~~ls~Li~eAi~~vg~~---g~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
++++|++|++||+.+++++ +.|+++ .|++++|+ ++++||+|+++|.+| |+++++||+|+++
T Consensus 157 K~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~ 227 (513)
T 3iyg_B 157 KLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIA 227 (513)
T ss_pred cccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEE
Confidence 5689999999999999987 777774 69999999 999999999999886 6778999999999
Q ss_pred ec--------------CCCCHHHHHH-----------HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeec
Q 007313 285 DK--------------KITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (608)
Q Consensus 285 d~--------------~I~~~~~l~~-----------~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~ 339 (608)
|+ +|++++++.+ +++++.+.|+||||++++|+++++++|..+ +|+||++
T Consensus 228 ~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~ 301 (513)
T 3iyg_B 228 NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEH 301 (513)
T ss_pred cCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEec
Confidence 98 4677777654 689999999999999999999999999875 6799998
Q ss_pred CCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHh
Q 007313 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIEN 416 (608)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~ 416 (608)
|++ .+|+|||++|||++++ +++++++++||+|++|+ ++++++++|.+|++
T Consensus 302 ~~~-----~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 354 (513)
T 3iyg_B 302 ADF-----VGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL----------------- 354 (513)
T ss_pred CCH-----HHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-----------------
Confidence 874 6799999999999999 79999999999999997 67899999999865
Q ss_pred hhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCC
Q 007313 417 AEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLD 495 (608)
Q Consensus 417 ~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~ 495 (608)
+++|||+|||+|+.+++|+||++|||++++|++++++ +||||||+|++|+.+|++++.+.+
T Consensus 355 ------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~ 416 (513)
T 3iyg_B 355 ------------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTP 416 (513)
T ss_pred ------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccC
Confidence 3699999999999999999999999999999999995 999999999999999999988777
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHH
Q 007313 496 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAS 572 (608)
Q Consensus 496 ~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~ 572 (608)
+.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|+
T Consensus 417 g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 495 (513)
T 3iyg_B 417 GKEA-VAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAA 495 (513)
T ss_pred cHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHH
Confidence 7766 899999999999999999999999999999999764 568999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHhhccCC
Q 007313 573 SVAKTFLMSDCVVVEIKE 590 (608)
Q Consensus 573 e~a~~iL~iD~iI~~~~~ 590 (608)
|+|++|||+|++|..+|+
T Consensus 496 ~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 496 EAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999988763
No 12
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.5e-100 Score=853.88 Aligned_cols=466 Identities=23% Similarity=0.380 Sum_probs=424.5
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
..++.|| .++|..|+.|+..|+++|+|||||+||||||++++|+++|||||+||||+|+++||. ||||+++|++
T Consensus 13 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 86 (543)
T 1a6d_B 13 GTKRESG--KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKT 86 (543)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTC
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHh
Confidence 4568889 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcC-----
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAG----- 214 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~----- 214 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. . +|.++|+||++
T Consensus 87 qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~ 166 (543)
T 1a6d_B 87 QDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSAS 166 (543)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGG
T ss_pred cCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999874 3 89999997753
Q ss_pred -ChhHHHHHHHHHHHhhccC--Cc-------EEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 215 -NNYEVGNMIAEAMSKVGRK--GV-------VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 215 -~~~~ls~Li~eAi~~vg~~--g~-------I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
++++|++|++||+.+++++ |. |+++ +|++++|+ ++++||+|+++|.|||| +++++||+|+
T Consensus 167 ~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 238 (543)
T 1a6d_B 167 VAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIA 238 (543)
T ss_dssp GGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEE
Confidence 5799999999999999886 63 7775 99999999 99999999999999986 4578999999
Q ss_pred EeecC-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEee
Q 007313 283 LVDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (608)
Q Consensus 283 l~d~~-------------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk 338 (608)
++|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||+
T Consensus 239 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~ 312 (543)
T 1a6d_B 239 LLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA------GIYAVR 312 (543)
T ss_dssp EESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT------TCEEEC
T ss_pred EEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC------CeeEec
Confidence 99998 7777765 78899999999999999999999999999988 467775
Q ss_pred cCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHH
Q 007313 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (608)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~ 415 (608)
++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|++
T Consensus 313 -----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 366 (543)
T 1a6d_B 313 -----RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN---------------- 366 (543)
T ss_dssp -----SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS----------------
T ss_pred -----cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCC----------------
Confidence 78899999999999999998 799999999999999985 5899999999876
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcC
Q 007313 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 416 ~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
+++|||+|||+|+.+++|+||+++||++++|+++++| +|||||++|++|+.+|++++.+.
T Consensus 367 -------------------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~ 427 (543)
T 1a6d_B 367 -------------------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKI 427 (543)
T ss_dssp -------------------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHT
T ss_pred -------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhc
Confidence 3689999999999999999999999999999999999 99999999999999999999877
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHH
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A 571 (608)
++.+| +++++|++||+.||++||+|||+|+.+++.+|+..| +.++|||+.+|++.||++.|||||+.||+++|++|
T Consensus 428 ~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A 506 (543)
T 1a6d_B 428 GGRQQ-LAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESA 506 (543)
T ss_dssp CSSHH-HHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHH
T ss_pred CChHH-HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHH
Confidence 77766 899999999999999999999999999999998653 46899999999999999999999999999999999
Q ss_pred HHHHHHHhchhHHhhccCCCCCC
Q 007313 572 SSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 572 ~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
+|+|++|||+|++|...|+++|+
T Consensus 507 ~e~a~~iL~id~iI~~~~~~~~~ 529 (543)
T 1a6d_B 507 TEAAIMILRIDDVIATKSSSSSS 529 (543)
T ss_dssp HHHHHHHHHEEEEEC--------
T ss_pred HHHHHHHHHHHHHHhcCccCCCC
Confidence 99999999999999998876554
No 13
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.5e-99 Score=839.36 Aligned_cols=456 Identities=20% Similarity=0.293 Sum_probs=421.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.+++..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (515)
T 3iyg_H 10 IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDAEVGDGT 85 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhceeCcch
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--c----h-HHHHHHHhhcC------ChhH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--D----S-ELADVAAVSAG------NNYE 218 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~-~l~~va~ts~~------~~~~ 218 (608)
||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ + . .|.++|+||++ ++++
T Consensus 86 TtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~ 165 (515)
T 3iyg_H 86 TSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAF 165 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHH
Confidence 99999999999999999999999999999999999999999999999984 4 3 56999999874 5789
Q ss_pred HHHHHHHHHHhhccC---CcEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC------
Q 007313 219 VGNMIAEAMSKVGRK---GVVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (608)
Q Consensus 219 ls~Li~eAi~~vg~~---g~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~------ 287 (608)
|++|++||+.+++.+ ++|+++ .|++++|+ ++++||+|+++|.||||+++ |.+++||+|+++|++
T Consensus 166 i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 166 FAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred HHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEccccccccc
Confidence 999999999999876 777764 68899998 99999999999999999764 448999999999994
Q ss_pred -------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchh
Q 007313 288 -------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (608)
Q Consensus 288 -------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~ 349 (608)
|++++++ .++++++.+.|+||||++++|++.++++|..+ | |++ ++++++.+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---g---I~~-----v~~~~k~~ 309 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---D---MFC-----AGRVPEED 309 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---C---Ccc-----cccccHHH
Confidence 7777776 56699999999999999999999888877543 3 344 45888999
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 007313 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (608)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (608)
|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|+++
T Consensus 310 leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------------- 358 (515)
T 3iyg_H 310 LKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------------- 358 (515)
T ss_pred HHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------------
Confidence 99999999999999 689999999999999985 47899999998764
Q ss_pred HHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHH
Q 007313 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (608)
Q Consensus 427 ~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (608)
..|||+|||+|+.+++|+||+++|||+++|++++++ +||||||+|++++.+|++++.+.++.+| +++++
T Consensus 359 ---------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 428 (515)
T 3iyg_H 359 ---------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQ-LLIGA 428 (515)
T ss_pred ---------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHH-HHHHH
Confidence 489999999999999999999999999999999985 9999999999999999999888878776 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchh
Q 007313 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSD 582 (608)
Q Consensus 506 ~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD 582 (608)
|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|+|+|++|||+|
T Consensus 429 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD 508 (515)
T 3iyg_H 429 YAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVD 508 (515)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998764 4579999999999999999999999999999999999999999999
Q ss_pred HHhhcc
Q 007313 583 CVVVEI 588 (608)
Q Consensus 583 ~iI~~~ 588 (608)
++|..+
T Consensus 509 ~ii~~~ 514 (515)
T 3iyg_H 509 ETIKNP 514 (515)
T ss_pred HHhcCC
Confidence 999754
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2e-100 Score=851.58 Aligned_cols=464 Identities=21% Similarity=0.291 Sum_probs=429.0
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
.|+..|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++
T Consensus 11 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~ 84 (528)
T 3p9d_D 11 FKNKEKP--QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAA 84 (528)
T ss_dssp SCBCCCH--HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHH
T ss_pred cchhcch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHH
Confidence 6888999 999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCC----
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGN---- 215 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~---- 215 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. +|.++|+||+++
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~ 164 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVS 164 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999987 45 899999999875
Q ss_pred --hhHHHHHHHHHHHhhcc--CCcEEE-------ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 216 --NYEVGNMIAEAMSKVGR--KGVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 216 --~~~ls~Li~eAi~~vg~--~g~I~v-------~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
+++|++|++||+.++++ +|.|.+ .+|++++|+ ++++||+|+++|.|||| |+++++||+|+++
T Consensus 165 ~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~ 237 (528)
T 3p9d_D 165 QYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLI 237 (528)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEE
Confidence 69999999999999987 454443 349999998 99999999999999986 7789999999999
Q ss_pred ecCCC-------------CHHH-----------HHHHHHHHHHcCCCEEEEcccc-----hHHHHHHHHHHhhcccceEE
Q 007313 285 DKKIT-------------NARD-----------LINVLEDAIRGAYPILIIAEDI-----EQEALATLVVNKLRGALKIA 335 (608)
Q Consensus 285 d~~I~-------------~~~~-----------l~~~le~~~~~~~~lvIia~~I-----~~~al~~L~~nk~~g~~~i~ 335 (608)
|++|+ ++++ +.++++++.+.|+||||++++| +++++++|..| +|+
T Consensus 238 ~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~ 311 (528)
T 3p9d_D 238 QFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIM 311 (528)
T ss_dssp CCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCC
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcE
Confidence 99865 4433 6788999999999999999999 99999999876 467
Q ss_pred EeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHH
Q 007313 336 ALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (608)
Q Consensus 336 avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~ 412 (608)
||+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.+|....
T Consensus 312 av~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------- 370 (528)
T 3p9d_D 312 VVK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------- 370 (528)
T ss_dssp EEE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------
T ss_pred EEE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------
Confidence 877 66789999999999999999 68899999999999997 4577889999876210
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHh
Q 007313 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (608)
Q Consensus 413 ~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (608)
.+++|||+|||+|+.+++|+||+++||++++|+++++| +|||||++|++|+.+|++++
T Consensus 371 ---------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 429 (528)
T 3p9d_D 371 ---------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEA 429 (528)
T ss_dssp ---------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCC
T ss_pred ---------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHh
Confidence 15789999999999999999999999999999999999 99999999999999999998
Q ss_pred hcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHH
Q 007313 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 568 (608)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al 568 (608)
.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|
T Consensus 430 ~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 508 (528)
T 3p9d_D 430 RSMEGVQA-FIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAI 508 (528)
T ss_dssp TTSCHHHH-TTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHH
T ss_pred hccChHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHH
Confidence 87777766 899999999999999999999999999999998764 46899999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhHHhhcc
Q 007313 569 EHASSVAKTFLMSDCVVVEI 588 (608)
Q Consensus 569 ~~A~e~a~~iL~iD~iI~~~ 588 (608)
++|+|+|++|||||+||..+
T Consensus 509 ~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 509 TLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHHHhhhHheecC
Confidence 99999999999999998753
No 15
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1e-100 Score=857.23 Aligned_cols=467 Identities=19% Similarity=0.275 Sum_probs=426.6
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
.+-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++|
T Consensus 17 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 17 TDASQG--KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp CCEEES--HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred cchhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 455578 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcC---
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG--- 214 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~--- 214 (608)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. . +|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999863 4 79999999864
Q ss_pred ---ChhHHHHHHHHHHHhhcc-C------CcEEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 215 ---NNYEVGNMIAEAMSKVGR-K------GVVTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 215 ---~~~~ls~Li~eAi~~vg~-~------g~I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
++++|++|++||+.++++ + +++++ +|++++|| ++++||+|+++|.||||.+ |+..++||+|+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 479999999999999984 3 56665 59999999 9999999999999999976 4556999999999
Q ss_pred ecC-------------CCCHHHHH-----------HHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecC
Q 007313 285 DKK-------------ITNARDLI-----------NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (608)
Q Consensus 285 d~~-------------I~~~~~l~-----------~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~ 340 (608)
|++ |++++++. ++++++.+.|++|||++++|++.++++|..+ +|+++
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI~~v--- 315 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NIFCA--- 315 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TCEEE---
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CCccc---
Confidence 997 56665554 4678899999999999999999888877643 34544
Q ss_pred CcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhh
Q 007313 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (608)
Q Consensus 341 ~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~ 417 (608)
+++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|+++
T Consensus 316 --~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------------- 371 (550)
T 3p9d_G 316 --GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------------- 371 (550)
T ss_dssp --ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------
T ss_pred --cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------
Confidence 578899999999999999999 799999999999999975 68899999998753
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCCh
Q 007313 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDN 496 (608)
Q Consensus 418 ~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~ 496 (608)
++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++|+.+|++++.++++
T Consensus 372 ------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 433 (550)
T 3p9d_G 372 ------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAG 433 (550)
T ss_dssp ------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCS
T ss_pred ------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCCh
Confidence 589999999999999999999999999999999999 9999999999999999999888878
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHH
Q 007313 497 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASS 573 (608)
Q Consensus 497 ~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e 573 (608)
.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|+|
T Consensus 434 ~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 512 (550)
T 3p9d_G 434 KQQ-MIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATE 512 (550)
T ss_dssp TTH-HHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHH
Confidence 776 899999999999999999999999999999998754 5689999999999999999999999999999999999
Q ss_pred HHHHHhchhHHhhccCCCCCC
Q 007313 574 VAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 574 ~a~~iL~iD~iI~~~~~~~~~ 594 (608)
+|++|||+|++|..+|+++++
T Consensus 513 ~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 513 ATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp HHHHHHTEEEEECCCCCC---
T ss_pred HHHHHHhHHHHhhCCCccccc
Confidence 999999999999998876654
No 16
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-98 Score=837.81 Aligned_cols=464 Identities=22% Similarity=0.293 Sum_probs=425.1
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhc
Q 007313 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (608)
Q Consensus 65 ~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d 144 (608)
+-.|| .++|..|+.|++.|+++|+|||||+||+|||++++|+++|||||+||||+|+++||. |||++++|++||
T Consensus 4 ~~~~g--~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd 77 (529)
T 3iyg_A 4 DRSTG--EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQD 77 (529)
T ss_pred chhch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhh
Confidence 44578 999999999999999999999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHh-cccccC--ch-HHHHHHHhhcC------
Q 007313 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQ-MSKEVE--DS-ELADVAAVSAG------ 214 (608)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~-~l~~va~ts~~------ 214 (608)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++ +++|++ +. +|.++|+||++
T Consensus 78 ~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 78 KEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 999987 44 89999999975
Q ss_pred ChhHHHHHHHHHHHhhc---cCC-----c--EEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEE
Q 007313 215 NNYEVGNMIAEAMSKVG---RKG-----V--VTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLL 282 (608)
Q Consensus 215 ~~~~ls~Li~eAi~~vg---~~g-----~--I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIl 282 (608)
++++|++|++||+.+++ ++| + |++ .+|++++|| ++++||+|+++|.||+| ++.++||||+
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIl 229 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIA 229 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEE
Confidence 57999999999999997 344 2 554 589999998 99999999999999985 4578999999
Q ss_pred EeecCC-------------CCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEee
Q 007313 283 LVDKKI-------------TNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (608)
Q Consensus 283 l~d~~I-------------~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk 338 (608)
++|+++ +++++ +.++++++.+.|+||||++++|+++|+++|..| +|+||+
T Consensus 230 ll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~------gI~av~ 303 (529)
T 3iyg_A 230 CLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA------GAMAVR 303 (529)
T ss_pred EecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc------CCceec
Confidence 999964 44433 456789999999999999999999999999998 457776
Q ss_pred cCCcCCCcchhHHHHHHHhCCeEeeccCCcc-ccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHH
Q 007313 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLA-LDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (608)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~-l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l 414 (608)
++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ ++++++++|.+|+++
T Consensus 304 -----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------------- 364 (529)
T 3iyg_A 304 -----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------------- 364 (529)
T ss_pred -----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------------
Confidence 67899999999999999999654444 3456788999999997 789999999999764
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhc
Q 007313 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (608)
Q Consensus 415 ~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (608)
++|||+|||+|+.+++|+||++|||++++|+++++| +||||||+|++|+.+|++++.+
T Consensus 365 ---------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~ 423 (529)
T 3iyg_A 365 ---------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 423 (529)
T ss_pred ---------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhh
Confidence 589999999999999999999999999999999999 9999999999999999999988
Q ss_pred CChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---C--------CceeeecCCCcccccccCCcccchH
Q 007313 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---N--------HKYGYNAATGNYEDLMAAGIIDPTK 562 (608)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~--------~~~G~d~~~g~i~d~~~~gI~Dp~~ 562 (608)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| + .++|||+.+|++.||++.|||||+.
T Consensus 424 ~~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~ 502 (529)
T 3iyg_A 424 MGSREQ-LAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTI 502 (529)
T ss_pred cCChHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHH
Confidence 888777 899999999999999999999999999999998754 2 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhHHhhccC
Q 007313 563 VVRCCLEHASSVAKTFLMSDCVVVEIK 589 (608)
Q Consensus 563 vk~~al~~A~e~a~~iL~iD~iI~~~~ 589 (608)
||+++|++|+|+|++|||+|+||..+|
T Consensus 503 vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 503 VKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 999999999999999999999998753
No 17
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.9e-100 Score=852.64 Aligned_cols=465 Identities=23% Similarity=0.329 Sum_probs=426.2
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeec-CCCCcEEecChHHHhccccccCcccchHHHHHHHHHH
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLES-KYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 141 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~-~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~ 141 (608)
.+++.|| .++|..|++||+.|+++|++||||+||||||++ ++|+|+|||||+||||+|+++||. |||++++|+
T Consensus 9 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~ 82 (527)
T 3p9d_B 9 QVTEERA--ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISK 82 (527)
T ss_dssp CEEEEES--HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHH
T ss_pred cchhhhh--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHH
Confidence 5788999 999999999999999999999999999999999 899999999999999999999997 999999999
Q ss_pred hhccccCCCchhHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHhcccccCc-----h-HHHHHHHhhcC
Q 007313 142 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAA-GANPVLITRGIEKTSKALVSELKQMSKEVED-----S-ELADVAAVSAG 214 (608)
Q Consensus 142 ~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~-g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~-~l~~va~ts~~ 214 (608)
+||+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++ . +|.+||+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 9999999999999999999999999999875 4 89999999987
Q ss_pred C------hhHHHHHHHHHHHhhccCC---cEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEE
Q 007313 215 N------NYEVGNMIAEAMSKVGRKG---VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (608)
Q Consensus 215 ~------~~~ls~Li~eAi~~vg~~g---~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll 283 (608)
+ +++|++|++||+.++++++ +|+++ .|++++|+ ++++||+|+++|.||| | ..++||+|++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----p----~~~~n~kIll 233 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----P----KRIENAKILI 233 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC----C----SCCSSCEEEE
T ss_pred cCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC----C----eeeecceEEE
Confidence 6 6899999999999999987 77775 69999998 9999999999999996 2 3578999999
Q ss_pred eecC--------------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEee
Q 007313 284 VDKK--------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALK 338 (608)
Q Consensus 284 ~d~~--------------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk 338 (608)
++++ |++++++ .+.++++.+.|+||||++++|+++++++|..| +|++|+
T Consensus 234 l~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~ 307 (527)
T 3p9d_B 234 ANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIE 307 (527)
T ss_dssp ECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCC
T ss_pred eccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEe
Confidence 8875 4555554 56789999999999999999999999999987 468888
Q ss_pred cCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHH
Q 007313 339 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIE 415 (608)
Q Consensus 339 ~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~ 415 (608)
+++ +.+|+|||++|||++++ ++++++++.||+|+.|+ ++++++++|.+|++
T Consensus 308 ~~~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------------- 361 (527)
T 3p9d_B 308 HAD-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA---------------- 361 (527)
T ss_dssp CCH-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC----------------
T ss_pred cCC-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC----------------
Confidence 665 56799999999999999 68999999999999997 67899999999875
Q ss_pred hhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcC
Q 007313 416 NAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 416 ~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.
T Consensus 362 -------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 362 -------------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp -------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 4699999999999999999999999999999999999 99999999999999999998777
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHH
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHA 571 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A 571 (608)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|
T Consensus 423 ~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A 501 (527)
T 3p9d_B 423 DGKKS-LAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSA 501 (527)
T ss_dssp CSHHH-HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHH
Confidence 77766 899999999999999999999999999999998753 57899999999999999999999999999999999
Q ss_pred HHHHHHHhchhHHhhccCCCCCC
Q 007313 572 SSVAKTFLMSDCVVVEIKEPEPA 594 (608)
Q Consensus 572 ~e~a~~iL~iD~iI~~~~~~~~~ 594 (608)
+|+|++|||+|++|...|+++.+
T Consensus 502 ~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 502 SEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999998876544
No 18
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-97 Score=828.15 Aligned_cols=458 Identities=21% Similarity=0.314 Sum_probs=420.0
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhh
Q 007313 64 KDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKT 143 (608)
Q Consensus 64 k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~ 143 (608)
++-.|| .++|..|+.|++.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 3 ~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~q 76 (515)
T 3iyg_E 3 KSRLMG--LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQ 76 (515)
T ss_pred chhhch--HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 345688 999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc----h-HHHHHHHhhcCC---
Q 007313 144 NDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED----S-ELADVAAVSAGN--- 215 (608)
Q Consensus 144 d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~----~-~l~~va~ts~~~--- 215 (608)
|+++||||||+||||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|++. . +|.++|+||+++
T Consensus 77 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i 156 (515)
T 3iyg_E 77 DDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVV 156 (515)
T ss_pred hhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccch
Confidence 99999999999999999999999999999999999999999999999999999998854 3 899999999875
Q ss_pred ---hhHHHHHHHHHHHhhccC-------CcEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEE
Q 007313 216 ---NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLL 283 (608)
Q Consensus 216 ---~~~ls~Li~eAi~~vg~~-------g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll 283 (608)
.+.|+++++||+..+.+. +.|++ .+|++++|+ ++++||+|+++|.||||++ .++||+|++
T Consensus 157 ~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m~~-------~~~~~kIal 228 (515)
T 3iyg_E 157 NSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQMPK-------QVEDAKIAI 228 (515)
T ss_pred hHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccccc-------cCCCceEEE
Confidence 478999999999998652 23444 579999998 9999999999999998754 467788888
Q ss_pred eecC-------------CCCHHHH-----------HHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeec
Q 007313 284 VDKK-------------ITNARDL-----------INVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKA 339 (608)
Q Consensus 284 ~d~~-------------I~~~~~l-----------~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~ 339 (608)
++++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|++ .+++
T Consensus 229 l~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~- 301 (515)
T 3iyg_E 229 LTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR- 301 (515)
T ss_pred EcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe-
Confidence 7764 5677765 6789999999999999999999999999999854 5666
Q ss_pred CCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE-----cCCeEEEEcCCCChhHHHHHHHHHHHHH
Q 007313 340 PGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIRTLI 414 (608)
Q Consensus 340 ~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~ri~~l~~~l 414 (608)
++++.+|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+++
T Consensus 302 ----~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------- 358 (515)
T 3iyg_E 302 ----WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------- 358 (515)
T ss_pred ----ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------
Confidence 44589999999999999999 799999999999999986 45899999999864
Q ss_pred HhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhc
Q 007313 415 ENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKET 493 (608)
Q Consensus 415 ~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~ 493 (608)
..|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++|+.+|++++.+
T Consensus 359 ---------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~ 417 (515)
T 3iyg_E 359 ---------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADK 417 (515)
T ss_pred ---------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhcc
Confidence 478999999999999999999999999999999999 9999999999999999999988
Q ss_pred CChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHH
Q 007313 494 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (608)
Q Consensus 494 ~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~ 569 (608)
+++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|+
T Consensus 418 ~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 496 (515)
T 3iyg_E 418 CPTLEQ-YAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQIS 496 (515)
T ss_pred CCcHHH-HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHH
Confidence 777776 899999999999999999999999999999998743 468999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHHhhc
Q 007313 570 HASSVAKTFLMSDCVVVE 587 (608)
Q Consensus 570 ~A~e~a~~iL~iD~iI~~ 587 (608)
+|+|+|++|||+|++|..
T Consensus 497 ~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 497 LATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHHhHHHhhcC
Confidence 999999999999999975
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.8e-98 Score=829.10 Aligned_cols=457 Identities=21% Similarity=0.301 Sum_probs=419.8
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhcc
Q 007313 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (608)
Q Consensus 66 i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~ 145 (608)
-.+| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ |||++++|++||+
T Consensus 6 ~~~g--~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 6 RDKP--AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred chhh--HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 3456 889999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC--ch-HHHHHHHhhcCCh------
Q 007313 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE--DS-ELADVAAVSAGNN------ 216 (608)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~--~~-~l~~va~ts~~~~------ 216 (608)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. +|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999987 44 8999999999875
Q ss_pred hHHHHHHHHHHHhhcc---CCc-----EEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeec
Q 007313 217 YEVGNMIAEAMSKVGR---KGV-----VTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK 286 (608)
Q Consensus 217 ~~ls~Li~eAi~~vg~---~g~-----I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~ 286 (608)
++|++|++||+.++++ +|. |+++ .|++++|+ ++++||+|+++|.| . ||..++||+|+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 554 6654 78999998 99999999999987 2 445678889988887
Q ss_pred CC-------------CCHH-----------HHHHHHHHHHHcCCCEEEE-----cccchHHHHHHHHHHhhcccceEEEe
Q 007313 287 KI-------------TNAR-----------DLINVLEDAIRGAYPILII-----AEDIEQEALATLVVNKLRGALKIAAL 337 (608)
Q Consensus 287 ~I-------------~~~~-----------~l~~~le~~~~~~~~lvIi-----a~~I~~~al~~L~~nk~~g~~~i~av 337 (608)
++ ++++ ++.++++++.+.|+||||+ +++|+++|+++|..| +|+||
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEE
Confidence 64 4554 3577899999999999999 899999999999987 57999
Q ss_pred ecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cC-CeEEEEcCCCChhHHHHHHHHHHHH
Q 007313 338 KAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TK-DTTTIVGDGSTQDAVSKRVAQIRTL 413 (608)
Q Consensus 338 k~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~-~~~~~i~~~~~~~~i~~ri~~l~~~ 413 (608)
++|+ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|++|++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~-------------- 360 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS-------------- 360 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC--------------
Confidence 9887 46799999999999999 689999999999999975 45 68899999864
Q ss_pred HHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhh
Q 007313 414 IENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKE 492 (608)
Q Consensus 414 l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~ 492 (608)
++++|||+|||+|+.+++|+||++|||++++|+++++| +|||||++|++|+.+|++++.
T Consensus 361 --------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~ 420 (518)
T 3iyg_D 361 --------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSR 420 (518)
T ss_pred --------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhh
Confidence 25799999999999999999999999999999999999 999999999999999999988
Q ss_pred cCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCCcccccccCCcccchHHHHHHHH
Q 007313 493 TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLE 569 (608)
Q Consensus 493 ~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~ 569 (608)
+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||+.||+++|+
T Consensus 421 ~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 499 (518)
T 3iyg_D 421 TLSGMES-YCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALT 499 (518)
T ss_pred cCChHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHH
Confidence 8877766 89999999999999999999999999999999874 3468999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHHhhcc
Q 007313 570 HASSVAKTFLMSDCVVVEI 588 (608)
Q Consensus 570 ~A~e~a~~iL~iD~iI~~~ 588 (608)
+|+|+|++|||+|+||+.+
T Consensus 500 ~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 500 LATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHhhcceEecC
Confidence 9999999999999998753
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.6e-98 Score=836.39 Aligned_cols=468 Identities=23% Similarity=0.326 Sum_probs=424.7
Q ss_pred ccccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHh
Q 007313 63 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAK 142 (608)
Q Consensus 63 ~k~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~ 142 (608)
.++..|| .++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++
T Consensus 37 ~~~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~ 110 (562)
T 3p9d_E 37 NKKRQHG--LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----AKLLVQLSKS 110 (562)
T ss_dssp CCSCSHH--HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHH
T ss_pred cceecch--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----HHHHHHHHHH
Confidence 4788899 999999999999999999999999999999999999999999999999999999998 9999999999
Q ss_pred hccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc-------hHHHHHHHhhcCC
Q 007313 143 TNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED-------SELADVAAVSAGN 215 (608)
Q Consensus 143 ~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~-------~~l~~va~ts~~~ 215 (608)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. ++|.++|+||+++
T Consensus 111 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~s 190 (562)
T 3p9d_E 111 QDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGS 190 (562)
T ss_dssp HHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSS
T ss_pred HHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999998864 2699999999874
Q ss_pred ------hhHHHHHHHHHHHhhccC-------CcEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCee
Q 007313 216 ------NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCK 280 (608)
Q Consensus 216 ------~~~ls~Li~eAi~~vg~~-------g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~k 280 (608)
.++|+++++||+..+.+. +.|++ ..|++++|| ++++||+|+++|.||||+++.. .+..++||+
T Consensus 191 K~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~-~~~~~~~~k 268 (562)
T 3p9d_E 191 KIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL-PKEGSDGVK 268 (562)
T ss_dssp STTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC------TTCSSCE
T ss_pred chhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-cccccccce
Confidence 578999999999998652 23444 579999999 9999999999999999876432 122348999
Q ss_pred EEEeecC-------------CCCHHH-----------HHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEE
Q 007313 281 LLLVDKK-------------ITNARD-----------LINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAA 336 (608)
Q Consensus 281 Ill~d~~-------------I~~~~~-----------l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~a 336 (608)
|++++++ |+++++ +.++++++.+.|+||||++++|+++|+++|..|++ .+
T Consensus 269 Iall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~ 342 (562)
T 3p9d_E 269 LAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PA 342 (562)
T ss_dssp ECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CC
T ss_pred EEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EE
Confidence 9998875 455555 56889999999999999999999999999999854 55
Q ss_pred eecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE-----cCCeEEEEcCCCChhHHHHHHHHHH
Q 007313 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL-----TKDTTTIVGDGSTQDAVSKRVAQIR 411 (608)
Q Consensus 337 vk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i-----~~~~~~~i~~~~~~~~i~~ri~~l~ 411 (608)
|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 343 v~-----~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~----------- 401 (562)
T 3p9d_E 343 VR-----WVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET----------- 401 (562)
T ss_dssp EE-----CCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-----------
T ss_pred Ee-----ccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-----------
Confidence 55 45688999999999999999 799999999999999987 36899999999864
Q ss_pred HHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHH
Q 007313 412 TLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAI 490 (608)
Q Consensus 412 ~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~ 490 (608)
..|||+|||+|+.+++|+||++||||+++|+++++| +||||||+|++|+.+|+++
T Consensus 402 ------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 457 (562)
T 3p9d_E 402 ------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEE 457 (562)
T ss_dssp ------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHH
T ss_pred ------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999 9999999999999999999
Q ss_pred hhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc----CCCceeeecCCCcccccccCCcccchHHHHH
Q 007313 491 KETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS----DNHKYGYNAATGNYEDLMAAGIIDPTKVVRC 566 (608)
Q Consensus 491 ~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~----~~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~ 566 (608)
+.++++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||+.||++
T Consensus 458 ~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 536 (562)
T 3p9d_E 458 ADKQRGIDQ-YAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQ 536 (562)
T ss_dssp HHTTCTTHH-HHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHH
T ss_pred hccCccHHH-HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHH
Confidence 988878776 89999999999999999999999999999999864 3578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhchhHHhhccCC
Q 007313 567 CLEHASSVAKTFLMSDCVVVEIKE 590 (608)
Q Consensus 567 al~~A~e~a~~iL~iD~iI~~~~~ 590 (608)
+|++|+|+|++|||||++|...+.
T Consensus 537 al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 537 QILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHHHHHHHHHHHHTEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999987643
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-96 Score=819.67 Aligned_cols=453 Identities=20% Similarity=0.306 Sum_probs=418.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
.++|..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++||+++||||
T Consensus 8 ~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 83 (515)
T 3iyg_G 8 RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEEVGDGT 83 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 889999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhcCC------hhHHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVED--S-ELADVAAVSAGN------NYEVGNM 222 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~~~------~~~ls~L 222 (608)
||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. . +|.++|+||+++ .++++++
T Consensus 84 TtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i 163 (515)
T 3iyg_G 84 TSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNI 163 (515)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875 3 899999999864 4678899
Q ss_pred HHHHHHhhccC--C--------cEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeec----
Q 007313 223 IAEAMSKVGRK--G--------VVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDK---- 286 (608)
Q Consensus 223 i~eAi~~vg~~--g--------~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~---- 286 (608)
++||+..+.++ + +|++ .+|++++|+ ++++||+|+++|.||. |+++++||||+++|+
T Consensus 164 ~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 164 ALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEcccccc
Confidence 99999998732 2 1333 589999999 9999999999999985 677899999999998
Q ss_pred ---------CCCCHHHHHHHHH-----------HHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCc
Q 007313 287 ---------KITNARDLINVLE-----------DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERK 346 (608)
Q Consensus 287 ---------~I~~~~~l~~~le-----------~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~ 346 (608)
+|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ++++
T Consensus 236 ~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~ 304 (515)
T 3iyg_G 236 KKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVR 304 (515)
T ss_pred cccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCC
Confidence 5788888877766 899999999999999999999999875 45665 5889
Q ss_pred chhHHHHHHHhCCeEeeccCCccccCCCCCCCcc-eeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHH
Q 007313 347 SQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGN-ASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYE 422 (608)
Q Consensus 347 ~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~-~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e 422 (608)
+++|+|||++|||++++ +++++++++||+ |+.|++ +++++++|++|+++
T Consensus 305 k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 305 KTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999999 689999999999 999975 56789999999874
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHH
Q 007313 423 REKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKV 501 (608)
Q Consensus 423 ~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~ 501 (608)
..|||+|||+|+.+++|+||++||||+++|++++++ +|||||++|++++.+|++++.+.++.+| +
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq-~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQ-W 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHH-H
Confidence 489999999999999999999999999999999775 9999999999999999999988888777 7
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC----CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q 007313 502 GADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD----NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKT 577 (608)
Q Consensus 502 ~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~----~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~ 577 (608)
++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|++|+|+|++
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~ 503 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVL 503 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999764 45799999999999999999999999999999999999999
Q ss_pred HhchhHHhhcc
Q 007313 578 FLMSDCVVVEI 588 (608)
Q Consensus 578 iL~iD~iI~~~ 588 (608)
|||+|++|...
T Consensus 504 iL~iD~ii~~~ 514 (515)
T 3iyg_G 504 LLRIDDIVSGH 514 (515)
T ss_pred HHHHHheeecC
Confidence 99999999754
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.5e-97 Score=820.20 Aligned_cols=451 Identities=20% Similarity=0.287 Sum_probs=412.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+++|..|+.||+.|+++|++||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++||+++||||
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~~~GDGT 85 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQEVGDGT 85 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhhhhCCCh
Confidence 689999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhc----ccccCch-HHHHHHHhhcCC-----hhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQM----SKEVEDS-ELADVAAVSAGN-----NYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~----s~~v~~~-~l~~va~ts~~~-----~~~ls~ 221 (608)
||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ ++++++. +|.++|+||+++ +++|++
T Consensus 86 TtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 165 (512)
T 3iyg_Q 86 NFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAK 165 (512)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHH
Confidence 999999999999999999999999999999999999999999998 5666666 899999999886 789999
Q ss_pred HHHHHHHhhccC-CcEEE-------ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC------
Q 007313 222 MIAEAMSKVGRK-GVVTL-------EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK------ 287 (608)
Q Consensus 222 Li~eAi~~vg~~-g~I~v-------~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~------ 287 (608)
|++||+.+++++ +.|.+ ..|+++.|+ ++++||+|+++|.+ | ++.++||+|++++++
T Consensus 166 livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~--~-------~~~~~n~kI~ll~~~le~~~~ 235 (512)
T 3iyg_Q 166 LIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG--D-------VTSVKDAKIAVYSCPFDGMIT 235 (512)
T ss_pred HHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC--C-------CcccccCceEEEecccccccc
Confidence 999999999986 44443 369999888 99999999999865 3 446788899888865
Q ss_pred -------CCCHHHHHHH-------HH----HHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchh
Q 007313 288 -------ITNARDLINV-------LE----DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQY 349 (608)
Q Consensus 288 -------I~~~~~l~~~-------le----~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~ 349 (608)
|++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||++|++ .+
T Consensus 236 e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~~-----~d 304 (512)
T 3iyg_Q 236 ETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNSK-----WD 304 (512)
T ss_pred cccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCCH-----HH
Confidence 5677777665 44 888999999999999999998887643 7899998874 56
Q ss_pred HHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEE---cCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHH
Q 007313 350 LDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVL---TKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKL 426 (608)
Q Consensus 350 L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 426 (608)
|+|||++|||++++ +++++++++||+|++|++ +++++++|++|+.
T Consensus 305 le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------------- 352 (512)
T 3iyg_Q 305 LRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------------- 352 (512)
T ss_pred HHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------------
Confidence 99999999999999 799999999999999975 4668899988742
Q ss_pred HHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHH
Q 007313 427 NERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADI 505 (608)
Q Consensus 427 ~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~ 505 (608)
++++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+|++++.+.++.+| +++++
T Consensus 353 -------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq-~~i~~ 424 (512)
T 3iyg_Q 353 -------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ-YAIKK 424 (512)
T ss_pred -------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH-HHHHH
Confidence 35799999999999999999999999999999999999 9999999999999999999988878776 89999
Q ss_pred HHHHHhHHHHHHHHHcCCChHHHHHHHHhc---CCCceeeecCCC--cccccccCCcccchHHHHHHHHHHHHHHHHHhc
Q 007313 506 VKRALCYPLKLIAKNAGVNGSVVSEKVLSS---DNHKYGYNAATG--NYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLM 580 (608)
Q Consensus 506 ~a~AL~~i~~~La~NaG~d~~~vi~kL~~~---~~~~~G~d~~~g--~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~ 580 (608)
|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+| +|.||++.|||||+.||+++|++|+|+|++|||
T Consensus 425 ~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~ 504 (512)
T 3iyg_Q 425 FAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLR 504 (512)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999875 357899999965 999999999999999999999999999999999
Q ss_pred hhHHhhc
Q 007313 581 SDCVVVE 587 (608)
Q Consensus 581 iD~iI~~ 587 (608)
+|++|..
T Consensus 505 id~ii~~ 511 (512)
T 3iyg_Q 505 VDQIIMA 511 (512)
T ss_pred HhHheec
Confidence 9999975
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.7e-96 Score=812.86 Aligned_cols=455 Identities=23% Similarity=0.355 Sum_probs=412.1
Q ss_pred cccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhcc
Q 007313 66 LHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTND 145 (608)
Q Consensus 66 i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~ 145 (608)
+..| .+++..|+.||..|+++|++||||+||||||++++|+|+|||||+||||+|+++||. |+|++++|++||+
T Consensus 5 ~~~~--~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~ 78 (517)
T 3iyg_Z 5 VARA--QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDD 78 (517)
T ss_pred hhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 3456 899999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC-ch-HHHHHHHhhcCC------hh
Q 007313 146 LAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE-DS-ELADVAAVSAGN------NY 217 (608)
Q Consensus 146 ~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~-~~-~l~~va~ts~~~------~~ 217 (608)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +. +|.++|+||+++ .+
T Consensus 79 e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d 158 (517)
T 3iyg_Z 79 ITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELAD 158 (517)
T ss_pred HhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999987 55 899999999874 48
Q ss_pred HHHHHHHHHHHhhccCC------c--EEEecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCC-
Q 007313 218 EVGNMIAEAMSKVGRKG------V--VTLEEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKI- 288 (608)
Q Consensus 218 ~ls~Li~eAi~~vg~~g------~--I~v~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I- 288 (608)
.|+++++||+..+.+.+ . |...+|++.+|+ ++++||+|+++|.||+ |+++++||+|+++|+++
T Consensus 159 ~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le 230 (517)
T 3iyg_Z 159 VLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLE 230 (517)
T ss_pred HHHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEeccccc
Confidence 89999999999886532 1 334689999999 8999999999999997 67789999999999875
Q ss_pred ------------CCHHHHH-----------HHHHHHHHcCCC--------E-EEEcccchHHHHHHHHHHhhcccceEEE
Q 007313 289 ------------TNARDLI-----------NVLEDAIRGAYP--------I-LIIAEDIEQEALATLVVNKLRGALKIAA 336 (608)
Q Consensus 289 ------------~~~~~l~-----------~~le~~~~~~~~--------l-vIia~~I~~~al~~L~~nk~~g~~~i~a 336 (608)
++++++. +.++++...+.+ + ||++++|+++++++|..+ +|++
T Consensus 231 ~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~ 304 (517)
T 3iyg_Z 231 YEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIA 304 (517)
T ss_pred ccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEE
Confidence 3444432 345566555544 3 566799999999999886 4577
Q ss_pred eecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCC-CcceeEE---EEcCCeEEEEcCCCChhHHHHHHHHHHH
Q 007313 337 LKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEV-LGNASKV---VLTKDTTTIVGDGSTQDAVSKRVAQIRT 412 (608)
Q Consensus 337 vk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~-lG~~~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~ 412 (608)
|+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | .++++++++|++|+++
T Consensus 305 v~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------ 361 (517)
T 3iyg_Z 305 LR-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------ 361 (517)
T ss_pred EE-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc------------
Confidence 76 45689999999999999999 799999999 99999 9 5789999999999875
Q ss_pred HHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHh
Q 007313 413 LIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIK 491 (608)
Q Consensus 413 ~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~ 491 (608)
..|||+|||+|+.+++|+||++||||+++|+++++| +||||||+|++|+.+|++++
T Consensus 362 -----------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~ 418 (517)
T 3iyg_Z 362 -----------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYK 418 (517)
T ss_pred -----------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHh
Confidence 368999999999999999999999999999999999 99999999999999999999
Q ss_pred hcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC---CCceeeecCCCcccccccCCcccchHHHHHHH
Q 007313 492 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCL 568 (608)
Q Consensus 492 ~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al 568 (608)
.+.++.+| +++++|++||+.+|++||+|||+|+.+++.+|++.| ++++|||+.+|+|.||++.|||||+.||+++|
T Consensus 419 ~~~~g~eq-~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al 497 (517)
T 3iyg_Z 419 PSVKGRAQ-LGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLL 497 (517)
T ss_pred ccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHH
Confidence 87777766 899999999999999999999999999999998764 56899999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhHHhhc
Q 007313 569 EHASSVAKTFLMSDCVVVE 587 (608)
Q Consensus 569 ~~A~e~a~~iL~iD~iI~~ 587 (608)
++|+|+|++||++|+||..
T Consensus 498 ~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 498 HSCTVIATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.7e-97 Score=831.25 Aligned_cols=461 Identities=21% Similarity=0.287 Sum_probs=407.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCc
Q 007313 72 GYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGT 151 (608)
Q Consensus 72 ~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGT 151 (608)
+++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ ||||+++|++||+++||||
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~e~GDGT 100 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKIDMGDGT 100 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHTTSSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhceeCCCc
Confidence 679999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhccccc----Cch-HHHHHHHhhcC-----ChhHHHH
Q 007313 152 TTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEV----EDS-ELADVAAVSAG-----NNYEVGN 221 (608)
Q Consensus 152 Tt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v----~~~-~l~~va~ts~~-----~~~~ls~ 221 (608)
||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++++ ++. +|.++|+||++ ++++|++
T Consensus 101 TtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~ 180 (568)
T 3p9d_H 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSE 180 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred eehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999876 344 89999999874 4689999
Q ss_pred HHHHHHHhhccC-----C-------cEEEe--cCCccccceeeeeeeEEeecccCCccccCcccCceecc---CeeEEEe
Q 007313 222 MIAEAMSKVGRK-----G-------VVTLE--EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYE---NCKLLLV 284 (608)
Q Consensus 222 Li~eAi~~vg~~-----g-------~I~v~--~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~---n~kIll~ 284 (608)
|++||+.+++++ + .|+++ +|++++|| ++++||+|+++|. +|+++++ ||||+++
T Consensus 181 livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll 250 (568)
T 3p9d_H 181 LVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVF 250 (568)
T ss_dssp HHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEE
T ss_pred HHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEE
Confidence 999999999874 3 46654 69999999 9999999999973 3677888 9999999
Q ss_pred ecC-------------CCCHHHHHH-----------HHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecC
Q 007313 285 DKK-------------ITNARDLIN-----------VLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAP 340 (608)
Q Consensus 285 d~~-------------I~~~~~l~~-----------~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~ 340 (608)
|++ |++++++.+ +++++.+.|+||||++++|+++++++|.++ +|+||++|
T Consensus 251 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v 324 (568)
T 3p9d_H 251 TCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVP 324 (568)
T ss_dssp CSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCC
T ss_pred ccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecC
Confidence 987 677877654 788999999999999999999999999887 57999876
Q ss_pred CcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhh
Q 007313 341 GFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENA 417 (608)
Q Consensus 341 ~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~ 417 (608)
+ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|.+|+.
T Consensus 325 ~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 376 (568)
T 3p9d_H 325 S-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------------ 376 (568)
T ss_dssp C-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------------
T ss_pred C-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------------
Confidence 5 78899999999999999 68999999999999996 45689999999862
Q ss_pred hhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH--cC-cccccchHhHHHHHHHHHHhhcC
Q 007313 418 EQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVE--EG-IVVGGGCTLLRLSSKVDAIKETL 494 (608)
Q Consensus 418 ~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~--~g-vVpGGGa~el~ls~~L~~~~~~~ 494 (608)
|++++|||+|||+|+.+++|+||++||||+++|++++ ++ +||||||+|++|+.+|++++.+.
T Consensus 377 ---------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~ 441 (568)
T 3p9d_H 377 ---------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441 (568)
T ss_dssp ---------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTC
T ss_pred ---------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccC
Confidence 2357999999999999999999999999999999999 65 99999999999999999999888
Q ss_pred ChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhcC-----------CCceeeecCCCc---ccccccCCcccc
Q 007313 495 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSD-----------NHKYGYNAATGN---YEDLMAAGIIDP 560 (608)
Q Consensus 495 ~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~~-----------~~~~G~d~~~g~---i~d~~~~gI~Dp 560 (608)
++.+| +++++|++||+.||++||+|||+|+.+++.+|++.| ++++|||+.+|+ |.||++.|||||
T Consensus 442 ~g~eq-~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp 520 (568)
T 3p9d_H 442 PGLLQ-LAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDM 520 (568)
T ss_dssp CSTHH-HHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHH
T ss_pred CcHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEc
Confidence 88777 899999999999999999999999999999999864 357999999997 999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCC
Q 007313 561 TKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 596 (608)
Q Consensus 561 ~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~ 596 (608)
+.||+++|++|+|+|++|||||++|..+|...|++|
T Consensus 521 ~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 521 LATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp HHHHHHHHHCCEECBCCC------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 999999999999999999999999999998877744
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.4e-95 Score=816.19 Aligned_cols=460 Identities=23% Similarity=0.335 Sum_probs=411.9
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHhhhcccCcCCCceEeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhc
Q 007313 65 DLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTN 144 (608)
Q Consensus 65 ~i~f~~~~~~r~~~~~gi~~la~iv~stlGP~G~~kmI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d 144 (608)
+...| .+++..|+.||..|+++|+|||||+||||||++++|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~g--~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 11 ESLRR--DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp EEEEH--HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred chhhH--HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 44456 899999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHhcccccC----ch-HHHHHHHhhcCC----
Q 007313 145 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVSELKQMSKEVE----DS-ELADVAAVSAGN---- 215 (608)
Q Consensus 145 ~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~g~~~a~~~~~~~L~~~s~~v~----~~-~l~~va~ts~~~---- 215 (608)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +. +|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999985 33 899999999875
Q ss_pred --hhHHHHHHHHHHHhhccC-------CcEEE--ecCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEe
Q 007313 216 --NYEVGNMIAEAMSKVGRK-------GVVTL--EEGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLV 284 (608)
Q Consensus 216 --~~~ls~Li~eAi~~vg~~-------g~I~v--~~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~ 284 (608)
.+.|+++++||+..+.+. ..|.+ .+|++++|+ ++++||+|+++|.||+ |+++++||+|+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999998631 12433 589999999 9999999999999985 6789999999999
Q ss_pred ecCCC-------------CHHH-----------HHHHHHHHHHc---------CCC-EEEEcccchHHHHHHHHHHhhcc
Q 007313 285 DKKIT-------------NARD-----------LINVLEDAIRG---------AYP-ILIIAEDIEQEALATLVVNKLRG 330 (608)
Q Consensus 285 d~~I~-------------~~~~-----------l~~~le~~~~~---------~~~-lvIia~~I~~~al~~L~~nk~~g 330 (608)
|++++ ++++ +.+.++++... |.| |||++++|+++|+++|..|+
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g--- 313 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN--- 313 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT---
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC---
Confidence 98752 2221 22345666543 455 66777899999999999884
Q ss_pred cceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEE---EEcCCeEEEEcCCCChhHHHHHH
Q 007313 331 ALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKV---VLTKDTTTIVGDGSTQDAVSKRV 407 (608)
Q Consensus 331 ~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v---~i~~~~~~~i~~~~~~~~i~~ri 407 (608)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.| .++++++++|++|+++
T Consensus 314 ---I~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 314 ---ILALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ---CEEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ---CeeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 47776 56789999999999999999 7999999999999999 5789999999999874
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHH
Q 007313 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSK 486 (608)
Q Consensus 408 ~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~ 486 (608)
..|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999
Q ss_pred HHH---HhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHHHHhc--------CCCceeeecCCCcccccccC
Q 007313 487 VDA---IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSS--------DNHKYGYNAATGNYEDLMAA 555 (608)
Q Consensus 487 L~~---~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~kL~~~--------~~~~~G~d~~~g~i~d~~~~ 555 (608)
|++ ++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.
T Consensus 426 L~~~~~~~~~~~g~eq-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~ 504 (546)
T 3p9d_F 426 LRSANMNKLGAKGKTK-TGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIE 504 (546)
T ss_dssp HHHHHTTTTTTTSHHH-HHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGG
T ss_pred HHhhhhhhhcCchHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhc
Confidence 999 5777777666 89999999999999999999999999999999864 34579999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHHHHhchhHHhhccCC
Q 007313 556 GIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 590 (608)
Q Consensus 556 gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~ 590 (608)
|||||+.||+++|++|+|+|++|||+|+||...+.
T Consensus 505 gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~ 539 (546)
T 3p9d_F 505 GIWDSYRVLRNAITGATGIASNLLLCDELLRAGRS 539 (546)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCS
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999987654
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.8e-93 Score=789.90 Aligned_cols=439 Identities=22% Similarity=0.345 Sum_probs=343.5
Q ss_pred EeecCCCCcEEecChHHHhccccccCcccchHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHHhcCCCcHHHHH
Q 007313 101 VLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR 180 (608)
Q Consensus 101 mI~~~~g~~~ITnDG~TIlk~i~l~hP~~n~gakLl~~~a~~~d~~~GDGTTt~vvLa~~Ll~e~~~li~~g~~P~~I~~ 180 (608)
||++++|+|+|||||+||||+|+++||. ||||+++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6888899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCc--h-HHHHHHHhhc------CChhHHHHHHHHHHHhhccC--Cc--------EEEe--
Q 007313 181 GIEKTSKALVSELKQMSKEVED--S-ELADVAAVSA------GNNYEVGNMIAEAMSKVGRK--GV--------VTLE-- 239 (608)
Q Consensus 181 g~~~a~~~~~~~L~~~s~~v~~--~-~l~~va~ts~------~~~~~ls~Li~eAi~~vg~~--g~--------I~v~-- 239 (608)
||++|++.+++.|+++++|++. . +|.++|+||+ +++++|++|++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 9999999999999999999874 4 8999999874 36899999999999999876 53 5665
Q ss_pred cCCccccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecC-------------CCCHHHH-----------H
Q 007313 240 EGKSAENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKK-------------ITNARDL-----------I 295 (608)
Q Consensus 240 ~G~~~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~-------------I~~~~~l-----------~ 295 (608)
+|++++|+ ++++||+|+++|.||+| +++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 99999999999999985 557999999999998 6777765 8
Q ss_pred HHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCC
Q 007313 296 NVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGK 375 (608)
Q Consensus 296 ~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~ 375 (608)
++++++.+.|+||||++++|+++|+++|..| +|+||+ ++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKA------GIYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHC------CEEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 8999999999999999999999999999997 457775 88899999999999999999 7999999
Q ss_pred CCCcceeEEEEc---CCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHHHHHH
Q 007313 376 EVLGNASKVVLT---KDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKE 452 (608)
Q Consensus 376 ~~lG~~~~v~i~---~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~~l~E 452 (608)
++||+|++|++. ++++++|++|++ +++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEecCCcHHHHHH
Confidence 999999999864 899999999875 368999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcC-cccccchHhHHHHHHHHHHhhcCChhhHHHHHHHHHHHHhHHHHHHHHHcCCChHHHHHH
Q 007313 453 KKLRVEDALNATKAAVEEG-IVVGGGCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEK 531 (608)
Q Consensus 453 ~~r~l~DAl~a~~~al~~g-vVpGGGa~el~ls~~L~~~~~~~~~~eq~~~~~~~a~AL~~i~~~La~NaG~d~~~vi~k 531 (608)
+||+++||++++|+++++| +|||||++|++|+.+|++++.+.++.+| +++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q-~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQ-LAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHH-HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 9999999999999999999987777666 8999999999999999999999999999999
Q ss_pred HHhcC---CCceeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhHHhhccCCCCCCCCCCCCCCCC
Q 007313 532 VLSSD---NHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNS 604 (608)
Q Consensus 532 L~~~~---~~~~G~d~~~g~i~d~~~~gI~Dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~~~~~~~~~~ 604 (608)
|+..| +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|...|+++|+ |+.++|++|
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~-~~~g~~~~~ 491 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG-MGPGGLPDM 491 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-----------------------
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC-CCCCCCCCC
Confidence 98643 4589999999999999999999999999999999999999999999999999887766 333334443
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-49 Score=376.90 Aligned_cols=193 Identities=48% Similarity=0.801 Sum_probs=189.9
Q ss_pred eeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHh
Q 007313 248 LYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNK 327 (608)
Q Consensus 248 ~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk 327 (608)
+++++||.|||||+||||+|++++|.++++||+||++|++|+++++++|+||.+.+.+.||+|+++||+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEcCCeEEEEcCCCChhHHHHHH
Q 007313 328 LRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRV 407 (608)
Q Consensus 328 ~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri 407 (608)
++|.++|+|||+|+|||.|+..|+|||++|||+++++++|+++++++.++||+|++|++++++|+++.|.++++.|++||
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEE
Q 007313 408 AQIRTLIENAEQDYEREKLNERIAKLSGGVAVI 440 (608)
Q Consensus 408 ~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI 440 (608)
+||+.+++.++|+|+||+|+||+|||+|++++|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=4.8e-48 Score=367.99 Aligned_cols=190 Identities=56% Similarity=0.881 Sum_probs=186.0
Q ss_pred eeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhc
Q 007313 250 VVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLR 329 (608)
Q Consensus 250 lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~ 329 (608)
=-+||.|||||+||||+|++++|.++++||+||++|++|+++++++|+||.+.+.+.||||+++||++|||++|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEcCCeEEEEcCCCChhHHHHHHHH
Q 007313 330 GALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQ 409 (608)
Q Consensus 330 g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~~~~~~~i~~ri~~ 409 (608)
|.++|+|||+|+|||.|+..|+|||++|||+++++++|+++++++.++||+|++|++++++|+++.|.++++.|++||+|
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHhhcCCeEE
Q 007313 410 IRTLIENAEQDYEREKLNERIAKLSGGVAV 439 (608)
Q Consensus 410 l~~~l~~~~~~~e~~~l~er~a~lsg~~~t 439 (608)
|+.+++.++++|+||+|+||+|||+|++++
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999999999999999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=7.2e-37 Score=278.14 Aligned_cols=144 Identities=56% Similarity=0.922 Sum_probs=142.0
Q ss_pred eeEEeecccCCccccCcccCceeccCeeEEEeecCCCCHHHHHHHHHHHHHcCCCEEEEcccchHHHHHHHHHHhhcccc
Q 007313 253 GMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIRGAYPILIIAEDIEQEALATLVVNKLRGAL 332 (608)
Q Consensus 253 G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~~~~~l~~~le~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~ 332 (608)
||.|||||+||||+|++++|.++++||+||++|++|++.++++|+||++.+.+.||+|+++||++|||++|+.||+||.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEEEcCCeEEEEcC
Q 007313 333 KIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGD 396 (608)
Q Consensus 333 ~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~i~~~~~~~i~~ 396 (608)
+|+|||+|+|||.|++.|+|||++|||+++++++|+++++++.++||+|++|++++++|+++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.85 E-value=2.4e-21 Score=186.38 Aligned_cols=146 Identities=17% Similarity=0.281 Sum_probs=120.6
Q ss_pred cccceeeeeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC-------------CHHH-----------HHHHHH
Q 007313 244 AENMLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLE 299 (608)
Q Consensus 244 ~~ds~~lv~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~-------------~~~~-----------l~~~le 299 (608)
++|| ++++|++|++++.+|. ||+.++||||++++++++ ++++ +.+.++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4678 8999999999988763 677899999999998742 3322 356788
Q ss_pred HHHHcCCCEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCc
Q 007313 300 DAIRGAYPILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLG 379 (608)
Q Consensus 300 ~~~~~~~~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG 379 (608)
++.+.|+++||++++|++.|+++|.++ +|+||+ ++++.+|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 999999999999999999999999887 457766 77899999999999999999 79999999999
Q ss_pred c-eeEEE---EcCCeEEEEcCCCChhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCeEEEEecCCCHH
Q 007313 380 N-ASKVV---LTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTET 448 (608)
Q Consensus 380 ~-~~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~a~lsg~~~tI~v~G~t~~ 448 (608)
+ |+.|+ ++++++++|++|+++ ..|||+|||++..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99987 578899999999764 4799999999854
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.75 E-value=5.9e-18 Score=159.69 Aligned_cols=127 Identities=21% Similarity=0.344 Sum_probs=108.9
Q ss_pred eeeeEEeecccCCccccCcccCceeccCeeEEEeecCCC-------------CHHH-----------HHHHHHHHHHcCC
Q 007313 251 VEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKIT-------------NARD-----------LINVLEDAIRGAY 306 (608)
Q Consensus 251 v~G~~~~~~~~sp~f~~~~~~~~~~~~n~kIll~d~~I~-------------~~~~-----------l~~~le~~~~~~~ 306 (608)
++|++|++++.+|. ||+.++||||++++++++ ++++ +...++++.+.|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999988864 677899999999998743 3332 3567889999999
Q ss_pred CEEEEcccchHHHHHHHHHHhhcccceEEEeecCCcCCCcchhHHHHHHHhCCeEeeccCCccccCCCCCCCcceeEEE-
Q 007313 307 PILIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVV- 385 (608)
Q Consensus 307 ~lvIia~~I~~~al~~L~~nk~~g~~~i~avk~~~~g~~~~~~L~~ia~~tGa~ii~~~~~~~l~~~~~~~lG~~~~v~- 385 (608)
++||++++|++.|+++|.++ +|+||+ ++++++|+|||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 99999999999999999887 457766 77899999999999999999 79999999999999996
Q ss_pred --EcCCeEEEEcCCCCh
Q 007313 386 --LTKDTTTIVGDGSTQ 400 (608)
Q Consensus 386 --i~~~~~~~i~~~~~~ 400 (608)
++++++++|++|.+-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578899999999763
Done!