Query 007317
Match_columns 608
No_of_seqs 439 out of 4544
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 21:56:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007317.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007317hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0511 Ankyrin repeat protein 100.0 6.8E-43 1.5E-47 337.6 21.8 490 6-599 9-504 (516)
2 KOG0783 Uncharacterized conser 100.0 1.3E-32 2.9E-37 288.4 19.0 283 168-517 556-854 (1267)
3 PHA02713 hypothetical protein; 100.0 4.6E-29 1E-33 274.0 15.4 193 326-570 9-205 (557)
4 PHA02790 Kelch-like protein; P 100.0 1.2E-28 2.6E-33 267.0 13.0 186 333-572 13-202 (480)
5 KOG4441 Proteins containing BT 100.0 1E-27 2.3E-32 262.2 16.1 197 324-569 18-214 (571)
6 PHA03098 kelch-like protein; P 99.9 1.7E-27 3.7E-32 263.4 16.2 179 339-570 6-186 (534)
7 KOG4350 Uncharacterized conser 99.9 2.9E-26 6.2E-31 224.3 9.5 191 333-570 35-225 (620)
8 KOG2075 Topoisomerase TOP1-int 99.8 3.9E-19 8.5E-24 179.2 11.2 191 332-570 104-300 (521)
9 KOG4412 26S proteasome regulat 99.8 4.8E-19 1E-23 156.5 8.8 116 15-140 62-182 (226)
10 PHA02790 Kelch-like protein; P 99.8 8.6E-19 1.9E-23 190.2 8.6 135 167-303 19-169 (480)
11 KOG4441 Proteins containing BT 99.8 2.7E-18 5.8E-23 188.3 11.6 140 167-306 33-184 (571)
12 KOG2838 Uncharacterized conser 99.7 5.2E-18 1.1E-22 158.6 10.1 255 170-486 130-396 (401)
13 PHA02713 hypothetical protein; 99.7 1.2E-17 2.6E-22 183.9 12.4 148 150-305 11-172 (557)
14 KOG4591 Uncharacterized conser 99.7 7.7E-18 1.7E-22 150.5 8.5 156 330-525 54-212 (280)
15 PF00651 BTB: BTB/POZ domain; 99.7 1.4E-17 3E-22 144.0 8.7 107 334-474 2-110 (111)
16 KOG4412 26S proteasome regulat 99.7 2.6E-17 5.6E-22 145.6 7.2 119 15-143 27-151 (226)
17 PHA03098 kelch-like protein; P 99.7 1.1E-16 2.3E-21 177.4 13.8 129 167-299 6-148 (534)
18 KOG4682 Uncharacterized conser 99.7 1.5E-16 3.3E-21 156.8 8.2 182 334-563 61-245 (488)
19 KOG4350 Uncharacterized conser 99.6 1.3E-15 2.8E-20 150.0 8.3 134 152-291 32-178 (620)
20 KOG0509 Ankyrin repeat and DHH 99.6 3.5E-15 7.6E-20 156.4 10.4 120 15-144 68-191 (600)
21 smart00225 BTB Broad-Complex, 99.6 9.5E-15 2.1E-19 120.4 8.7 90 344-468 1-90 (90)
22 PHA02946 ankyin-like protein; 99.5 6.9E-14 1.5E-18 150.3 12.1 121 14-144 61-186 (446)
23 PHA02859 ankyrin repeat protei 99.5 8.8E-14 1.9E-18 134.2 11.6 110 18-137 44-164 (209)
24 PHA02791 ankyrin-like protein; 99.5 1.2E-13 2.6E-18 138.6 11.3 163 14-193 52-218 (284)
25 PHA02878 ankyrin repeat protei 99.5 1.2E-13 2.6E-18 150.8 11.9 117 14-140 156-278 (477)
26 PF00651 BTB: BTB/POZ domain; 99.5 1.4E-13 3.1E-18 118.7 9.9 95 168-262 8-105 (111)
27 PHA02884 ankyrin repeat protei 99.5 1.8E-13 3.8E-18 137.4 11.6 118 18-144 25-150 (300)
28 PHA02874 ankyrin repeat protei 99.5 2E-13 4.4E-18 147.2 13.0 121 14-144 113-236 (434)
29 KOG0509 Ankyrin repeat and DHH 99.5 1.1E-13 2.4E-18 145.3 10.4 120 14-143 100-224 (600)
30 PHA02741 hypothetical protein; 99.5 2.6E-13 5.6E-18 126.6 11.6 117 18-144 14-145 (169)
31 PHA02791 ankyrin-like protein; 99.5 1.6E-13 3.4E-18 137.8 10.7 114 19-144 24-141 (284)
32 PHA02878 ankyrin repeat protei 99.4 3.1E-13 6.7E-18 147.6 11.4 117 14-140 190-309 (477)
33 KOG0512 Fetal globin-inducing 99.4 2.4E-13 5.1E-18 119.7 8.3 82 18-107 90-172 (228)
34 KOG0195 Integrin-linked kinase 99.4 2.3E-13 5E-18 128.9 8.5 115 15-139 24-141 (448)
35 KOG0508 Ankyrin repeat protein 99.4 1.2E-13 2.7E-18 139.0 6.2 119 14-143 106-227 (615)
36 PHA02859 ankyrin repeat protei 99.4 6.8E-13 1.5E-17 128.1 10.6 108 22-142 18-134 (209)
37 KOG0502 Integral membrane anky 99.4 1.7E-13 3.7E-18 125.1 5.8 118 15-142 150-270 (296)
38 PHA02875 ankyrin repeat protei 99.4 7.2E-13 1.6E-17 142.1 11.7 120 14-143 24-180 (413)
39 PHA02716 CPXV016; CPX019; EVM0 99.4 4.5E-13 9.7E-18 149.1 10.3 115 15-139 165-325 (764)
40 KOG0512 Fetal globin-inducing 99.4 5.4E-13 1.2E-17 117.5 8.4 110 32-143 62-175 (228)
41 PHA02743 Viral ankyrin protein 99.4 8E-13 1.7E-17 122.7 10.2 119 15-143 10-140 (166)
42 PHA03100 ankyrin repeat protei 99.4 9.6E-13 2.1E-17 144.0 12.5 120 14-143 95-227 (480)
43 PHA02743 Viral ankyrin protein 99.4 4E-13 8.7E-18 124.7 7.9 102 15-124 47-156 (166)
44 PHA03095 ankyrin-like protein; 99.4 1.1E-12 2.4E-17 143.3 12.4 120 14-143 36-164 (471)
45 PHA03095 ankyrin-like protein; 99.4 1.6E-12 3.5E-17 141.9 12.1 120 14-143 72-199 (471)
46 PHA02874 ankyrin repeat protei 99.4 1.7E-12 3.6E-17 140.1 11.6 118 14-142 146-265 (434)
47 smart00225 BTB Broad-Complex, 99.4 1.7E-12 3.7E-17 106.7 8.8 89 172-260 1-89 (90)
48 KOG4214 Myotrophin and similar 99.4 1.7E-12 3.7E-17 102.3 7.5 92 15-115 25-116 (117)
49 PHA02716 CPXV016; CPX019; EVM0 99.4 1.6E-12 3.5E-17 144.8 10.3 115 16-140 203-361 (764)
50 PHA03100 ankyrin repeat protei 99.4 1.9E-12 4.1E-17 141.7 10.9 121 14-144 130-263 (480)
51 PHA02798 ankyrin-like protein; 99.4 3.6E-12 7.8E-17 139.6 12.9 118 14-140 60-191 (489)
52 PHA02946 ankyin-like protein; 99.4 4.8E-12 1E-16 136.1 13.1 118 14-142 94-219 (446)
53 PHA02875 ankyrin repeat protei 99.4 2.7E-12 5.8E-17 137.7 11.2 115 20-144 97-215 (413)
54 KOG4591 Uncharacterized conser 99.3 4E-12 8.6E-17 114.2 9.8 133 150-291 52-199 (280)
55 KOG2075 Topoisomerase TOP1-int 99.3 8E-12 1.7E-16 126.9 12.9 133 167-299 111-261 (521)
56 PLN03192 Voltage-dependent pot 99.3 3.1E-12 6.6E-17 148.2 11.1 120 14-144 547-668 (823)
57 PHA02741 hypothetical protein; 99.3 4.8E-12 1E-16 118.0 9.5 100 15-122 50-158 (169)
58 PHA02798 ankyrin-like protein; 99.3 5.9E-12 1.3E-16 137.9 10.7 121 14-143 26-157 (489)
59 PHA02876 ankyrin repeat protei 99.3 6.5E-12 1.4E-16 143.3 11.3 117 15-141 331-452 (682)
60 PF12796 Ank_2: Ankyrin repeat 99.3 2E-11 4.4E-16 100.7 11.2 84 37-124 1-87 (89)
61 PHA02876 ankyrin repeat protei 99.3 8.6E-12 1.9E-16 142.3 11.2 117 14-140 364-485 (682)
62 PHA02917 ankyrin-like protein; 99.3 1.3E-11 2.9E-16 138.0 11.8 130 14-145 57-243 (661)
63 KOG0508 Ankyrin repeat protein 99.3 5.4E-12 1.2E-16 127.3 6.9 117 18-144 77-196 (615)
64 PHA02736 Viral ankyrin protein 99.3 1.4E-11 3E-16 113.0 8.5 84 38-121 60-151 (154)
65 PHA02795 ankyrin-like protein; 99.3 1.7E-11 3.7E-16 128.1 9.8 117 14-142 140-265 (437)
66 PHA02989 ankyrin repeat protei 99.2 2.2E-11 4.9E-16 133.5 10.8 123 14-144 97-269 (494)
67 KOG0510 Ankyrin repeat protein 99.2 1.4E-11 3E-16 132.2 8.6 119 18-144 266-390 (929)
68 KOG4214 Myotrophin and similar 99.2 2.9E-11 6.3E-16 95.4 7.1 101 35-138 4-107 (117)
69 PHA02884 ankyrin repeat protei 99.2 5.1E-11 1.1E-15 119.7 10.7 95 14-116 55-157 (300)
70 KOG4177 Ankyrin [Cell wall/mem 99.2 2.1E-11 4.4E-16 138.7 8.4 116 14-137 529-650 (1143)
71 PHA02736 Viral ankyrin protein 99.2 1.5E-11 3.2E-16 112.9 5.3 115 17-143 9-138 (154)
72 PF12796 Ank_2: Ankyrin repeat 99.2 3.8E-11 8.2E-16 99.1 7.3 70 15-96 20-89 (89)
73 PHA02989 ankyrin repeat protei 99.2 5.7E-11 1.2E-15 130.3 10.8 118 14-141 59-191 (494)
74 KOG4177 Ankyrin [Cell wall/mem 99.2 3.5E-11 7.6E-16 136.8 9.3 127 15-143 464-618 (1143)
75 PF13637 Ank_4: Ankyrin repeat 99.2 2.2E-11 4.8E-16 90.2 5.2 54 25-86 1-54 (54)
76 KOG0514 Ankyrin repeat protein 99.2 3.5E-11 7.5E-16 118.0 7.7 121 16-146 259-422 (452)
77 KOG0502 Integral membrane anky 99.2 5.5E-11 1.2E-15 108.9 8.3 119 14-144 118-239 (296)
78 KOG0505 Myosin phosphatase, re 99.2 6.8E-11 1.5E-15 121.9 9.4 132 15-157 63-256 (527)
79 PHA02730 ankyrin-like protein; 99.1 1.3E-10 2.8E-15 127.3 10.2 116 14-140 368-505 (672)
80 KOG0510 Ankyrin repeat protein 99.1 9.6E-11 2.1E-15 125.8 8.6 132 5-144 99-238 (929)
81 PHA02795 ankyrin-like protein; 99.1 1.3E-10 2.8E-15 121.5 9.1 119 14-144 99-234 (437)
82 PHA02730 ankyrin-like protein; 99.1 2E-10 4.4E-15 125.8 10.3 120 17-144 32-168 (672)
83 PHA02917 ankyrin-like protein; 99.1 3.2E-10 6.9E-15 127.0 11.7 114 14-139 21-144 (661)
84 cd00204 ANK ankyrin repeats; 99.1 6.2E-10 1.3E-14 97.2 11.0 113 20-142 2-117 (126)
85 KOG0514 Ankyrin repeat protein 99.1 2.3E-10 4.9E-15 112.4 7.6 84 35-118 342-429 (452)
86 KOG0195 Integrin-linked kinase 99.0 4.9E-10 1.1E-14 106.5 8.1 102 14-123 56-160 (448)
87 PF13857 Ank_5: Ankyrin repeat 99.0 2.6E-10 5.7E-15 84.9 4.7 54 52-105 1-55 (56)
88 PLN03192 Voltage-dependent pot 99.0 1E-09 2.2E-14 127.3 11.3 114 14-139 580-697 (823)
89 PF13857 Ank_5: Ankyrin repeat 99.0 1.8E-10 3.9E-15 85.8 3.3 51 15-73 6-56 (56)
90 KOG3676 Ca2+-permeable cation 99.0 1.1E-09 2.3E-14 118.6 8.7 111 23-143 182-320 (782)
91 KOG0505 Myosin phosphatase, re 99.0 1.9E-09 4.2E-14 111.4 9.5 119 15-143 96-276 (527)
92 KOG0515 p53-interacting protei 99.0 1.1E-09 2.3E-14 112.1 7.0 93 17-117 575-673 (752)
93 TIGR00870 trp transient-recept 98.9 1.7E-09 3.7E-14 124.6 8.6 116 22-145 125-271 (743)
94 KOG0783 Uncharacterized conser 98.9 2.1E-09 4.6E-14 115.1 8.2 124 168-291 708-848 (1267)
95 PHA02792 ankyrin-like protein; 98.9 4.3E-09 9.2E-14 114.3 9.6 102 37-140 343-452 (631)
96 PTZ00322 6-phosphofructo-2-kin 98.9 6.3E-09 1.4E-13 117.4 11.4 100 36-137 85-194 (664)
97 KOG1710 MYND Zn-finger and ank 98.9 4.5E-09 9.8E-14 100.1 7.9 94 18-119 38-135 (396)
98 TIGR00870 trp transient-recept 98.9 6.4E-09 1.4E-13 119.9 9.9 118 15-142 42-219 (743)
99 PHA02792 ankyrin-like protein; 98.8 8.3E-09 1.8E-13 112.1 9.6 101 14-122 361-479 (631)
100 KOG0507 CASK-interacting adapt 98.8 2.3E-09 4.9E-14 114.6 4.5 118 16-143 40-160 (854)
101 COG0666 Arp FOG: Ankyrin repea 98.8 1.9E-08 4E-13 97.6 9.5 98 14-119 95-203 (235)
102 COG0666 Arp FOG: Ankyrin repea 98.8 4.3E-08 9.4E-13 95.0 11.8 122 15-146 63-195 (235)
103 PTZ00322 6-phosphofructo-2-kin 98.8 1.7E-08 3.6E-13 113.9 8.5 81 14-102 104-191 (664)
104 KOG4682 Uncharacterized conser 98.7 3.7E-08 7.9E-13 98.3 9.3 123 168-291 67-203 (488)
105 KOG0511 Ankyrin repeat protein 98.7 8.1E-08 1.8E-12 94.9 11.6 111 180-291 301-431 (516)
106 KOG0507 CASK-interacting adapt 98.7 2E-08 4.4E-13 107.5 7.9 123 14-144 71-202 (854)
107 cd00204 ANK ankyrin repeats; 98.7 1.8E-07 3.8E-12 81.5 10.5 93 15-115 30-125 (126)
108 PF13637 Ank_4: Ankyrin repeat 98.5 2.8E-07 6.1E-12 68.0 6.3 51 66-116 1-54 (54)
109 KOG0515 p53-interacting protei 98.5 4.5E-07 9.9E-12 93.2 8.7 102 35-137 552-656 (752)
110 PF13606 Ank_3: Ankyrin repeat 98.4 2.8E-07 6E-12 58.7 3.9 30 65-94 1-30 (30)
111 PF07707 BACK: BTB And C-termi 98.4 3.6E-07 7.8E-12 77.4 4.1 77 483-570 1-77 (103)
112 PF00023 Ank: Ankyrin repeat H 98.3 8.6E-07 1.9E-11 58.0 4.4 33 65-97 1-33 (33)
113 KOG0818 GTPase-activating prot 98.3 1.3E-06 2.7E-11 89.4 7.7 95 20-116 122-220 (669)
114 KOG2384 Major histocompatibili 98.3 7.7E-07 1.7E-11 80.3 4.5 135 56-207 2-143 (223)
115 KOG1710 MYND Zn-finger and ank 98.2 2.8E-06 6E-11 81.4 7.1 100 38-139 17-120 (396)
116 PF13606 Ank_3: Ankyrin repeat 98.2 1.6E-06 3.5E-11 55.1 3.0 30 24-61 1-30 (30)
117 KOG4369 RTK signaling protein 98.2 2.4E-06 5.2E-11 94.8 5.8 84 38-121 762-849 (2131)
118 KOG4369 RTK signaling protein 98.1 1.5E-06 3.4E-11 96.3 3.8 113 32-144 789-905 (2131)
119 KOG3676 Ca2+-permeable cation 98.1 1.1E-05 2.3E-10 88.2 8.9 82 38-119 245-331 (782)
120 KOG0506 Glutaminase (contains 98.0 5.6E-06 1.2E-10 84.4 5.4 86 37-122 510-599 (622)
121 PF00023 Ank: Ankyrin repeat H 98.0 4.2E-06 9E-11 54.7 2.9 33 24-64 1-33 (33)
122 smart00875 BACK BTB And C-term 97.9 6.6E-06 1.4E-10 69.2 2.8 74 483-567 1-74 (101)
123 KOG0782 Predicted diacylglycer 97.9 1.5E-05 3.3E-10 82.7 5.2 109 35-145 868-981 (1004)
124 KOG2838 Uncharacterized conser 97.8 0.00022 4.7E-09 68.1 10.8 74 336-416 124-197 (401)
125 KOG2716 Polymerase delta-inter 97.8 0.00018 3.9E-09 68.6 10.0 99 345-475 7-105 (230)
126 KOG0705 GTPase-activating prot 97.7 8.1E-05 1.8E-09 77.9 7.5 89 34-122 625-720 (749)
127 KOG2384 Major histocompatibili 97.7 7.3E-05 1.6E-09 67.8 5.7 69 15-91 2-71 (223)
128 KOG0782 Predicted diacylglycer 97.7 0.00011 2.3E-09 76.6 7.7 96 14-117 888-988 (1004)
129 KOG0506 Glutaminase (contains 97.6 4.2E-05 9.1E-10 78.2 3.7 69 13-89 527-596 (622)
130 KOG0705 GTPase-activating prot 97.6 8.3E-05 1.8E-09 77.8 5.9 65 21-93 657-721 (749)
131 KOG0522 Ankyrin repeat protein 97.6 0.00014 3E-09 75.9 6.6 70 38-107 25-97 (560)
132 KOG0818 GTPase-activating prot 97.4 0.00027 5.9E-09 72.8 6.6 65 15-87 156-221 (669)
133 KOG0522 Ankyrin repeat protein 97.4 0.0005 1.1E-08 71.8 8.2 56 33-88 55-110 (560)
134 KOG1987 Speckle-type POZ prote 97.2 0.00023 5E-09 72.7 3.1 132 351-520 109-245 (297)
135 KOG0521 Putative GTPase activa 97.0 0.00054 1.2E-08 77.7 4.5 76 23-106 654-729 (785)
136 PF02214 BTB_2: BTB/POZ domain 97.0 0.0012 2.5E-08 54.8 5.1 89 345-467 1-94 (94)
137 KOG3473 RNA polymerase II tran 97.0 0.0043 9.3E-08 49.7 7.8 87 345-459 19-111 (112)
138 PF11822 DUF3342: Domain of un 96.7 0.0027 5.9E-08 63.3 6.1 90 352-475 14-104 (317)
139 KOG0520 Uncharacterized conser 96.6 0.0013 2.8E-08 74.3 3.0 55 38-93 613-668 (975)
140 smart00512 Skp1 Found in Skp1 96.6 0.012 2.6E-07 49.7 8.3 98 345-460 4-104 (104)
141 KOG1724 SCF ubiquitin ligase, 96.0 0.073 1.6E-06 48.4 10.4 123 350-489 13-141 (162)
142 KOG2505 Ankyrin repeat protein 95.8 0.016 3.5E-07 60.3 6.0 72 46-117 404-481 (591)
143 smart00248 ANK ankyrin repeats 95.7 0.019 4.1E-07 34.7 4.0 29 65-93 1-29 (30)
144 KOG1665 AFH1-interacting prote 95.5 0.039 8.4E-07 51.6 6.7 95 343-469 9-105 (302)
145 KOG3609 Receptor-activated Ca2 95.5 0.017 3.7E-07 64.2 5.1 103 35-143 27-143 (822)
146 PF03931 Skp1_POZ: Skp1 family 95.3 0.091 2E-06 39.7 7.2 56 345-412 3-59 (62)
147 PF02214 BTB_2: BTB/POZ domain 95.2 0.056 1.2E-06 44.6 6.4 81 173-254 1-87 (94)
148 KOG2716 Polymerase delta-inter 95.1 0.12 2.7E-06 49.5 9.0 88 173-261 7-98 (230)
149 KOG2714 SETA binding protein S 94.9 0.11 2.4E-06 53.6 8.5 93 345-471 13-111 (465)
150 KOG0521 Putative GTPase activa 94.6 0.035 7.5E-07 63.3 4.4 86 54-141 642-732 (785)
151 smart00248 ANK ankyrin repeats 94.2 0.054 1.2E-06 32.5 2.9 29 24-60 1-29 (30)
152 KOG0520 Uncharacterized conser 94.0 0.079 1.7E-06 60.4 5.5 68 13-88 629-702 (975)
153 COG5201 SKP1 SCF ubiquitin lig 93.8 1.2 2.5E-05 38.1 10.7 123 345-487 4-134 (158)
154 PF03931 Skp1_POZ: Skp1 family 93.4 0.31 6.6E-06 36.8 6.2 55 173-230 3-58 (62)
155 PF01466 Skp1: Skp1 family, di 93.2 0.22 4.7E-06 39.6 5.5 49 447-495 15-63 (78)
156 KOG3609 Receptor-activated Ca2 92.9 0.19 4.1E-06 56.2 6.1 77 14-98 51-163 (822)
157 KOG1778 CREB binding protein/P 90.6 0.12 2.6E-06 52.3 1.5 145 344-524 28-172 (319)
158 KOG2505 Ankyrin repeat protein 88.4 0.34 7.3E-06 50.9 2.7 48 36-86 433-480 (591)
159 KOG3473 RNA polymerase II tran 88.2 2 4.3E-05 34.9 6.3 78 173-251 19-110 (112)
160 smart00512 Skp1 Found in Skp1 87.3 2.3 5E-05 35.7 6.8 59 173-232 4-64 (104)
161 KOG2714 SETA binding protein S 86.6 2.5 5.4E-05 44.0 7.6 66 173-239 13-82 (465)
162 KOG2715 Uncharacterized conser 86.2 7.4 0.00016 35.1 9.4 105 340-475 18-122 (210)
163 PF11822 DUF3342: Domain of un 84.4 1.9 4.1E-05 43.5 5.5 73 180-253 14-89 (317)
164 KOG1987 Speckle-type POZ prote 83.2 0.62 1.3E-05 47.4 1.7 110 179-288 109-231 (297)
165 KOG1665 AFH1-interacting prote 82.6 4.3 9.3E-05 38.4 6.7 90 171-261 9-104 (302)
166 PF07707 BACK: BTB And C-termi 74.7 2.6 5.7E-05 34.9 2.7 29 263-291 1-29 (103)
167 PF06128 Shigella_OspC: Shigel 72.9 7.9 0.00017 36.9 5.5 51 42-92 226-280 (284)
168 PF11929 DUF3447: Domain of un 59.6 16 0.00034 28.6 4.1 46 36-88 9-54 (76)
169 PF03158 DUF249: Multigene fam 58.5 17 0.00037 33.7 4.6 44 37-86 147-190 (192)
170 smart00875 BACK BTB And C-term 57.4 9.1 0.0002 31.2 2.6 29 263-291 1-29 (101)
171 KOG1724 SCF ubiquitin ligase, 49.1 1.9E+02 0.0041 26.4 9.8 110 178-289 13-126 (162)
172 KOG2723 Uncharacterized conser 35.5 94 0.002 30.0 5.9 98 341-470 6-105 (221)
173 KOG3840 Uncharaterized conserv 32.1 84 0.0018 31.4 5.0 87 344-461 97-185 (438)
174 KOG2715 Uncharacterized conser 31.2 1.1E+02 0.0024 27.8 5.2 69 170-238 20-92 (210)
175 PF01466 Skp1: Skp1 family, di 24.8 1.4E+02 0.003 23.4 4.3 34 479-512 12-45 (78)
176 COG5201 SKP1 SCF ubiquitin lig 22.5 5.2E+02 0.011 22.5 8.5 114 173-289 4-121 (158)
177 KOG2114 Vacuolar assembly/sort 21.8 1.6E+02 0.0034 34.0 5.4 53 547-599 784-836 (933)
No 1
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=6.8e-43 Score=337.57 Aligned_cols=490 Identities=31% Similarity=0.408 Sum_probs=369.4
Q ss_pred chhhhhhCCCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 007317 6 QSTIDAELDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (608)
Q Consensus 6 ~~~~~~~~~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~L 85 (608)
-||+.-|++..++|.++-....|+.+.++..|++||+.|+++.+++|++.|+++|.+|.+..+||.+|+.+||.+++++|
T Consensus 9 ~~~~~~dl~dk~mD~~~~~~s~~~~~~~f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklL 88 (516)
T KOG0511|consen 9 SWTLESDLEDKDMDLQDYKPSVPLKKVPFGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLL 88 (516)
T ss_pred chhhhcchhhhhcchhhcCcccccccCchHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHH
Confidence 39999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcCcccCCCCcHHHHHhhHHHHHHHHhhcCCCCCCCCcccccccccccccccchhhHHHHHHhhcccccCCCCCC
Q 007317 86 LESGAICSEHTFDGDRCHYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASN 165 (608)
Q Consensus 86 l~~ga~~~~~d~~g~~~~~aa~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~l~~~~~~~~~~~l~~~~~~~ 165 (608)
+++||-+.....+|..|||++.+..+.++|+.+...... =.++|.++|+++++.+..+
T Consensus 89 LenGAiC~rdtf~G~RC~YgaLnd~IR~mllsydi~KA~---------------------d~~qP~aahi~s~l~dt~l- 146 (516)
T KOG0511|consen 89 LENGAICSRDTFDGDRCHYGALNDRIRRMLLSYDILKAF---------------------DARQPPAAHIQSSLRDTFL- 146 (516)
T ss_pred HHcCCcccccccCcchhhhhhhhHHHHHHHHHHHHHHHh---------------------hccCCcchHHHHHhhcccc-
Confidence 999999999999999999999999999998887654322 1245778889987777655
Q ss_pred CCCCCCCeeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHH
Q 007317 166 SDSFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (608)
Q Consensus 166 ~~~~~~Dv~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (608)
+...|++|.. .|..|.|||.+|++||++|...+-.-+. ....|.-..+-+.+|..|++|+|-..-.+-.+....+
T Consensus 147 --~~~~di~f~~q~g~~f~ahkfll~arSs~~~~k~v~~~~--~~heI~~~~v~~~~f~~flk~lyl~~na~~~~qynal 222 (516)
T KOG0511|consen 147 --GCCHDIDFLQQEGANFDAHKFLLEARSSNYFPKDVMFYV--QGHEIEAHRVILSAFSPFLKQLYLNTNAEWKDQYNAL 222 (516)
T ss_pred --ccccchHHHhhccccccHHHHHHHhhhcccCchhhhhcc--ccCchhhhhhhHhhhhHHHHHHHHhhhhhhhhHHHHH
Confidence 2356999986 7788999999999999988665543332 2334544567889999999999988555556666788
Q ss_pred HHHHhHhcHHHHHHHHHHH--HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhhhcccCCCCcccc
Q 007317 245 VKICKVCKCESLQRIIEKE--LIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNG 322 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~~~--l~~~~~A~~~~~~~L~~~~~~~i~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 322 (608)
+.+...++.+.+...++.. -...+....+.+..... .+.+++.....-..+.+
T Consensus 223 lsi~~kF~~e~l~~~~~kdr~~~~sR~~k~~q~~~tq~--------------------~~~~~Li~~~~~~ykt~----- 277 (516)
T KOG0511|consen 223 LSIEVKFSKEKLSLEISKDRMEDLSRICKVCQCESTQK--------------------IIEKELIHQRYAEYKTH----- 277 (516)
T ss_pred HhhhhhccHHHhHHHHhhhHHHHHHHHHHHHhHHHHHH--------------------HHHHHHHHHHhhhhccc-----
Confidence 8888777666666665531 11111222222211111 11111111111000000
Q ss_pred chhhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHH
Q 007317 323 ICKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKET 402 (608)
Q Consensus 323 ~~~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~ 402 (608)
+.-..+. +..+--.+.+ +.+-.++ .+|||++++ .|++||+.||.| +|.|+.. .+..+...++.+...+
T Consensus 278 ~dl~Ns~---~~~fsl~~ay--iql~~~~-RyP~hla~i-~R~eyfk~mf~g--~f~e~s~---n~~~p~lslp~~~~~v 345 (516)
T KOG0511|consen 278 RDLDNSP---MKRFSLQGAY--IQLPEED-RYPAHLARI-LRVEYFKSMFVG--DFIESSV---NDTRPGLSLPSLADVV 345 (516)
T ss_pred hhhccCh---hheeeecccc--ccccccc-cccHHHHHH-HHHHHHHHHhcc--chhhhcC---CccccccccchHHHHH
Confidence 0000000 1111111111 3443444 499999999 899999999999 8888532 3456677788888999
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCch--h-HHHHHHHHHHhhcccCC
Q 007317 403 FEKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLF--P-LKRAVADVLLLHLEMVS 479 (608)
Q Consensus 403 ~~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~--~-L~~~c~~~l~~~l~~~~ 479 (608)
.+.+++|+|+++.. +.++ -+.+++..|+++.+. + |+......|.++.+-+.
T Consensus 346 veI~lr~lY~d~td-i~~~-------------------------~A~dvll~ad~lal~~dr~Lkt~as~~itq~~e~id 399 (516)
T KOG0511|consen 346 VEIDLRNLYCDQTD-IIFD-------------------------VASDVLLFADKLALADDRLLKTAASAEITQWLELID 399 (516)
T ss_pred HHHHHHHhhccccc-chHH-------------------------HHhhHHHHhhHhhhhhhhhhhhhhhHHHHHHHHHHH
Confidence 99999999999995 8888 889999999999776 2 67777777777765334
Q ss_pred HHHHHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHH
Q 007317 480 PAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLR 559 (608)
Q Consensus 480 ~~n~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~ 559 (608)
.-+++.++.++...+...|...+..|++.|+..+...|++...... +.+..+ .++|||++|++++.+
T Consensus 400 ~y~V~dIl~~~wd~~~~rlEqfa~~~~a~hl~~l~~dPe~~~~~~~------------s~~ri~-~rqeTDtieLlDDiR 466 (516)
T KOG0511|consen 400 MYGVLDILEYCWDLVACRLEQFAETHEARHLLLLLPDPEGDSSLRT------------SVPRIP-ARQETDTIELLDDIR 466 (516)
T ss_pred hhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcCCchhhHHHHh------------ccchhh-hhcccchhHHHHHHH
Confidence 5578899999999999999999999999999988888888765443 444444 568999999997766
Q ss_pred HHHHHHhhhhhccchhhHHhHHHHHHHHHHHhhhccCCCC
Q 007317 560 EKWLEAEAAELDKRDESALMFDKRLEMLMQVAKDEKSEPI 599 (608)
Q Consensus 560 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (608)
|+..+.-+++..++++..+++|++++.+|++-+|++..
T Consensus 467 --y~l~~~~~~~~~D~~~~~~~d~L~~l~~i~Ey~k~m~m 504 (516)
T KOG0511|consen 467 --YLLAEALELDMRDESALIFDDRLAMLVEIAEYEKSMSM 504 (516)
T ss_pred --HHHHHHcCCCcchhHHhhhhhhHHHHHHHHHHhhhhhH
Confidence 99999999999999999999999999999988877643
No 2
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=100.00 E-value=1.3e-32 Score=288.39 Aligned_cols=283 Identities=22% Similarity=0.306 Sum_probs=191.8
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCc------------CcccEEEcCCCCHHHHHHHHHHHhcCcc-
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY------------RNEIRFSREKLSYPALYGLIHFFYSDRL- 234 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e------------~~~~~i~l~~v~~~~~~~lL~ylYtg~~- 234 (608)
.-+.||+|.||++.|++||.||++||++|+++|...... +....|.+.+++|.+|+.+|+|+||+..
T Consensus 556 ds~hDVtf~vg~~~F~aHKfIl~~rs~flrkL~l~~~~~s~~~dIY~~~~~~~~~~~~ve~i~p~mfe~lL~~iYtdt~~ 635 (1267)
T KOG0783|consen 556 DSFHDVTFYVGTSMFHAHKFILCARSSFLRKLLLQKKKSSVSNDIYIEEITQSHSTIRVEDIPPLMFEILLHYIYTDTLL 635 (1267)
T ss_pred cccceEEEEecCeecccceEEEEeccHHHHHHHHhhccccccceeeeecccccCceeeeccCCHHHHHHHHHHHhccccc
Confidence 457899999999999999999999999999999753322 2334566889999999999999999964
Q ss_pred -ccChhhHHHHHHHHhHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhhhcc
Q 007317 235 -EIAVDDMEDLVKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARS 313 (608)
Q Consensus 235 -~i~~~~~~~ll~~A~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~~~~~~~l~~~l~~~~~~~~~~~ 313 (608)
+-..|++..+.-- ..-..+.+.-..|-.+...++.+...+|......+...+ + +..+..+.....+.
T Consensus 636 ~P~heDdidci~fs---~~k~N~~qrtrtCeMl~~~lekf~l~el~~~~~s~~~~~------~-~~n~ia~~~~N~l~-- 703 (1267)
T KOG0783|consen 636 SPWHEDDIDCIRFS---PLKENLSQRTRTCEMLANLLEKFHLAELLPFSVSRQPLL------S-LTNDIAQLYNNFLV-- 703 (1267)
T ss_pred CCccccchhhhhcc---ccccChhhcccHHHHHHHHHhhhhHHhhhhhhhhccchh------h-cccHHHHHhcCeeE--
Confidence 2234443211000 000000010111222333334444333333322222111 1 11111111111111
Q ss_pred cCCCCccccchhhcchHHhhcccccCCCCCcEEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCc
Q 007317 314 NMDHNIDNGICKLSSSVEAMHISDHVDDLADVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPC 392 (608)
Q Consensus 314 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~Dv~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~ 392 (608)
+-.-.+.-|+.+++ +|+.++|||++|++|++||..||.. -|.|+.. -.
T Consensus 704 ----------------------lsdh~e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~--~w~E~sS-------~t 752 (1267)
T KOG0783|consen 704 ----------------------LSDHEETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQF--VWMESSS-------IT 752 (1267)
T ss_pred ----------------------ecCCccceeEEEEecCCcCcccceeEeeeHHHHHHHHHHH--HHhhhcc-------ce
Confidence 11123445666666 7788999999999999999999998 8888632 34
Q ss_pred eecCCCCHHHHHHHHHHHh-cCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHH
Q 007317 393 IEEHDLSKETFEKMIEYMY-TDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVL 471 (608)
Q Consensus 393 i~l~~~~~~~~~~ll~yiY-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l 471 (608)
+....+..+.+..||+|+| +++.. +..+. . ..+++.+++.+||.|.+.+|+..|+..|
T Consensus 753 ~~~~p~~~e~m~ivLdylYs~d~~~-~~k~~------~--------------~~dF~~~il~iaDqlli~~Lk~Ice~~l 811 (1267)
T KOG0783|consen 753 VNLSPLTVEHMSIVLDYLYSDDKVE-LFKDL------K--------------ESDFMFEILSIADQLLILELKSICEQSL 811 (1267)
T ss_pred eecCcchHHHHHHHHHHHHccchHH-HHhcc------c--------------hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444566999999999999 44442 33330 0 1238999999999999999999999999
Q ss_pred HhhcccCCHHHHHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcch
Q 007317 472 LLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSR 517 (608)
Q Consensus 472 ~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~ 517 (608)
.+.+ +..||..++++|.+|++.+|+..|++||+.|+..++.-.
T Consensus 812 l~kl---~lk~~~~llefaamY~ak~L~~~C~dfic~N~~~~Lear 854 (1267)
T KOG0783|consen 812 LRKL---NLKTLPTLLEFAAMYHAKELYSRCIDFICHNIEFFLEAR 854 (1267)
T ss_pred HhHh---cccchHHHHHHHHHhhHHHHHHHHHHHHHHhHHHHHHhc
Confidence 9998 999999999999999999999999999999999887644
No 3
>PHA02713 hypothetical protein; Provisional
Probab=99.96 E-value=4.6e-29 Score=274.01 Aligned_cols=193 Identities=15% Similarity=0.188 Sum_probs=166.9
Q ss_pred hcchHHhhcccccCCCCCcEEEEeC-CeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCC-CCCceecCCCCHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGD-ILPCIEEHDLSKETF 403 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~-~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~-~~~~i~l~~~~~~~~ 403 (608)
....++.|+.++.++.+|||+|.++ |++|+|||.||||+|+||++||.+ +|.++ ...+|.|+++++++|
T Consensus 9 ~~~~l~~l~~lr~~~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~---------~~~e~~~~~~v~l~~v~~~~~ 79 (557)
T PHA02713 9 NRRVVSNISNLLDDDILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTT---------PMIIRDLVTRVNLQMFDKDAV 79 (557)
T ss_pred hHHHHHHHHHHHhCCCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcC---------CchhhccCceEEeccCCHHHH
Confidence 3456788899999999999999997 899999999999999999999998 44443 357899999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHH
Q 007317 404 EKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAEL 483 (608)
Q Consensus 404 ~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~ 483 (608)
+.+|+|+||++ ++.+ ++.++|.+|++|+++.|++.|++||.+++ +++||
T Consensus 80 ~~ll~y~Yt~~---i~~~-------------------------nv~~ll~aA~~lqi~~l~~~C~~~l~~~l---~~~NC 128 (557)
T PHA02713 80 KNIVQYLYNRH---ISSM-------------------------NVIDVLKCADYLLIDDLVTDCESYIKDYT---NHDTC 128 (557)
T ss_pred HHHHHHhcCCC---CCHH-------------------------HHHHHHHHHHHHCHHHHHHHHHHHHHhhC---Cccch
Confidence 99999999986 4566 99999999999999999999999999999 89999
Q ss_pred HHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccc-cCCC-CCcccccCCCCcchHHHHHH
Q 007317 484 CHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRT-TVPS-APGAIINVDQGNLLDDLREK 561 (608)
Q Consensus 484 ~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~-~~~~-~~~~~e~~d~~~~~~~~~~~ 561 (608)
+.++.+|..+.+..|.+.|.+||.+||.++..+++|.+|+.+ . +..+ ++++ +.+.+| .+++ +++++
T Consensus 129 l~i~~~~~~~~~~~L~~~a~~~i~~~f~~v~~~~ef~~L~~~----~---l~~lL~~d~~l~v~~E----e~v~-eav~~ 196 (557)
T PHA02713 129 IYMYHRLYEMSHIPIVKYIKRMLMSNIPTLITTDAFKKTVFE----I---LFDIISTNDNVYLYRE----GYKV-TILLK 196 (557)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHhCChhhhhCCHH----H---HHHHhccccccCCCcH----HHHH-HHHHH
Confidence 999998899888899999999999999999999999876655 3 2333 3334 345566 5666 99999
Q ss_pred HHHHhhhhh
Q 007317 562 WLEAEAAEL 570 (608)
Q Consensus 562 W~~~~~~~~ 570 (608)
|+++++...
T Consensus 197 W~~~d~~~r 205 (557)
T PHA02713 197 WLEYNYITE 205 (557)
T ss_pred HHhcCHHHH
Confidence 999987554
No 4
>PHA02790 Kelch-like protein; Provisional
Probab=99.95 E-value=1.2e-28 Score=267.04 Aligned_cols=186 Identities=13% Similarity=0.179 Sum_probs=158.5
Q ss_pred hcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceec--CCCCHHHHHHHHHHH
Q 007317 333 MHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE--HDLSKETFEKMIEYM 410 (608)
Q Consensus 333 l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l--~~~~~~~~~~ll~yi 410 (608)
+-.++..+.+|||++.+| ++|+|||+|||+.|+||++||.+ +|.|+.. +|.+ .++++++|+.+|+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~-~~~~~HR~VLAa~S~YFraMF~~---------~~~Es~~-~v~~~~~~v~~~~l~~lldy~ 81 (480)
T PHA02790 13 ILALSMTKKFKTIIEAIG-GNIIVNSTILKKLSPYFRTHLRQ---------KYTKNKD-PVTRVCLDLDIHSLTSIVIYS 81 (480)
T ss_pred HHHHHhhhhhceEEEEcC-cEEeeehhhhhhcCHHHHHHhcC---------Ccccccc-ceEEEecCcCHHHHHHHHHhh
Confidence 334566789999988765 59999999999999999999998 4444432 4554 389999999999999
Q ss_pred hcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHH
Q 007317 411 YTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILS 490 (608)
Q Consensus 411 Yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A 490 (608)
|||++. ++.+ ++.++|.+|++||++.+++.|++||.++| +++||+.++.+|
T Consensus 82 YTg~l~-it~~-------------------------nV~~ll~aA~~Lqi~~v~~~C~~fL~~~l---~~~NCl~i~~~A 132 (480)
T PHA02790 82 YTGKVY-IDSH-------------------------NVVNLLRASILTSVEFIIYTCINFILRDF---RKEYCVECYMMG 132 (480)
T ss_pred eeeeEE-Eecc-------------------------cHHHHHHHHHHhChHHHHHHHHHHHHhhC---CcchHHHHHHHH
Confidence 999996 9999 99999999999999999999999999999 899999999999
Q ss_pred hccCchHHHHHHHHHHHHhHHHhhcc--hhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHHHHhhh
Q 007317 491 DMYGVFKVREYCLEVIACNFETFADS--REFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAA 568 (608)
Q Consensus 491 ~~~~~~~L~~~c~~~I~~n~~~v~~~--~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~~~~~~ 568 (608)
+.|++..|.+.|.+||.+||.++.++ ++|..|+.. ..++++++.+.+| .+++ +++++|++++..
T Consensus 133 ~~y~~~~L~~~a~~fi~~nF~~v~~~~~~ef~~L~~~---------~lLssd~L~v~~E----e~V~-eav~~Wl~~~~~ 198 (480)
T PHA02790 133 IEYGLSNLLCHTKDFIAKHFLELEDDIIDNFDYLSMK---------LILESDELNVPDE----DYVV-DFVIKWYMKRRN 198 (480)
T ss_pred HHhCHHHHHHHHHHHHHHhHHHHhcccchhhhhCCHH---------HhcccccCCCccH----HHHH-HHHHHHHHhhHH
Confidence 99999999999999999999999986 788865531 2236666767777 5677 999999998765
Q ss_pred hhcc
Q 007317 569 ELDK 572 (608)
Q Consensus 569 ~~~~ 572 (608)
...+
T Consensus 199 ~~~~ 202 (480)
T PHA02790 199 RLGN 202 (480)
T ss_pred HHHH
Confidence 4433
No 5
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.95 E-value=1e-27 Score=262.18 Aligned_cols=197 Identities=22% Similarity=0.297 Sum_probs=175.4
Q ss_pred hhhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHH
Q 007317 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (608)
Q Consensus 324 ~~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~ 403 (608)
......++.|+.++..+.+|||++.+++++|+|||.||||.|+||++||.+ +++|+.+.+|.+.++++.++
T Consensus 18 ~h~~~~l~~l~~lr~~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~---------~l~e~~~~~i~l~~v~~~~l 88 (571)
T KOG4441|consen 18 SHSKFLLQGLNELREEGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTS---------GLKESKQKEINLEGVDPETL 88 (571)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEECCeeechHHHHHHhccHHHHHHhcC---------CcccccceEEEEecCCHHHH
Confidence 444556888999999999999999999999999999999999999999999 66777889999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHH
Q 007317 404 EKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAEL 483 (608)
Q Consensus 404 ~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~ 483 (608)
+.+++|+||+.+. ++.+ ++.+|+.+|++|||+.+...|++||.+++ .++||
T Consensus 89 ~~ll~y~Yt~~i~-i~~~-------------------------nVq~ll~aA~~lQi~~v~~~C~~fL~~~l---~~~Nc 139 (571)
T KOG4441|consen 89 ELLLDYAYTGKLE-ISED-------------------------NVQELLEAASLLQIPEVVDACCEFLESQL---DPSNC 139 (571)
T ss_pred HHHHHHhhcceEE-echH-------------------------hHHHHHHHHHHhhhHHHHHHHHHHHHhcC---CHHHH
Confidence 9999999999996 9999 99999999999999999999999999999 79999
Q ss_pred HHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHH
Q 007317 484 CHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWL 563 (608)
Q Consensus 484 ~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~ 563 (608)
+.+..+|+.|++..|.+.+..||..||.++..+++|.+|..+ .+..++ .++++....| .+++ +++++|+
T Consensus 140 lgi~~~a~~~~~~~L~~~a~~~i~~~F~~v~~~eefl~L~~~----~l~~ll--~~d~l~v~~E----~~vf-~a~~~Wv 208 (571)
T KOG4441|consen 140 LGIRRFAELHSCTELLEVADEYILQHFAEVSKTEEFLLLSLE----ELIGLL--SSDDLNVDSE----EEVF-EAAMRWV 208 (571)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccHHhhCCCHH----HHHhhc--cccCCCcCCH----HHHH-HHHHHHH
Confidence 999999999999999999999999999999999999965544 432222 4455555555 3456 9999999
Q ss_pred HHhhhh
Q 007317 564 EAEAAE 569 (608)
Q Consensus 564 ~~~~~~ 569 (608)
++++.+
T Consensus 209 ~~d~~~ 214 (571)
T KOG4441|consen 209 KHDFEE 214 (571)
T ss_pred hcCHhh
Confidence 998866
No 6
>PHA03098 kelch-like protein; Provisional
Probab=99.95 E-value=1.7e-27 Score=263.36 Aligned_cols=179 Identities=17% Similarity=0.270 Sum_probs=158.7
Q ss_pred CCCCCcEEEEe--CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCC
Q 007317 339 VDDLADVCVRV--DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLK 416 (608)
Q Consensus 339 ~~~~~Dv~l~~--~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~ 416 (608)
++.+|||+|++ +|++|+|||.||+++|+||++||.+ ++. ..+|.+++ ++++|+.+|+|+|||++.
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~---------~~~---~~~i~l~~-~~~~~~~~l~y~Ytg~~~ 72 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKN---------NFK---ENEINLNI-DYDSFNEVIKYIYTGKIN 72 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhC---------CCC---CceEEecC-CHHHHHHHHHHhcCCceE
Confidence 78999999998 9999999999999999999999998 333 36799999 999999999999999996
Q ss_pred CCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCch
Q 007317 417 DIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVF 496 (608)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~ 496 (608)
++.+ ++.+|+.+|++|+++.|+..|+++|.+.+ +.+||+.++.+|..|++.
T Consensus 73 -i~~~-------------------------~~~~ll~~A~~l~~~~l~~~C~~~l~~~l---~~~nc~~~~~~a~~~~~~ 123 (534)
T PHA03098 73 -ITSN-------------------------NVKDILSIANYLIIDFLINLCINYIIKII---DDNNCIDIYRFSFFYGCK 123 (534)
T ss_pred -EcHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHhHHHHHHHHHHHcCcH
Confidence 8888 99999999999999999999999999999 899999999999999999
Q ss_pred HHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHHHHhhhhh
Q 007317 497 KVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAEL 570 (608)
Q Consensus 497 ~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~~~~~~~~ 570 (608)
.|.+.|.+||.+||..+..+++|.+|..+ .+..+ ++++++...+| .+++ +++++|+++++.+.
T Consensus 124 ~L~~~~~~~i~~nf~~v~~~~~f~~l~~~----~l~~l--l~~~~L~v~~E----~~v~-~av~~W~~~~~~~r 186 (534)
T PHA03098 124 KLYSAAYNYIRNNIELIYNDPDFIYLSKN----ELIKI--LSDDKLNVSSE----DVVL-EIIIKWLTSKKNNK 186 (534)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhcCCHH----HHHHH--hcCCCcCcCCH----HHHH-HHHHHHHhcChhhh
Confidence 99999999999999999999999977654 32222 25566666667 5666 99999999987544
No 7
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.93 E-value=2.9e-26 Score=224.35 Aligned_cols=191 Identities=20% Similarity=0.324 Sum_probs=172.4
Q ss_pred hcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc
Q 007317 333 MHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT 412 (608)
Q Consensus 333 l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt 412 (608)
+..+..+.+++||+|++++++|+|||.|||+||.|||+|+.+ ||.|+.+..|++++.+.++|+.+|+||||
T Consensus 35 ~~~l~~~e~y~DVtfvve~~rfpAHRvILAaRs~yFRAlLYg---------Gm~Es~q~~ipLq~t~~eAF~~lLrYiYt 105 (620)
T KOG4350|consen 35 FDELFTSEDYSDVTFVVEDTRFPAHRVILAARSSYFRALLYG---------GMQESHQQLIPLQETNSEAFRALLRYIYT 105 (620)
T ss_pred HHHHhhcCcccceEEEEeccccchhhhhHHHHHHHHHHHHhh---------hhhhhhhcccccccccHHHHHHHHHHHhh
Confidence 444677899999999999999999999999999999999999 77777789999999999999999999999
Q ss_pred CCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhc
Q 007317 413 DGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDM 492 (608)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~ 492 (608)
|++. +... ..+..++.|.+|++|++..|.....+|+++.+ ..+|++.++..|..
T Consensus 106 g~~~-l~~~----------------------~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL---~~~NvCmifdaA~l 159 (620)
T KOG4350|consen 106 GKID-LAGV----------------------EEDILLDYLSLAHRYGFIQLETAISEYLKEIL---KNENVCMIFDAAYL 159 (620)
T ss_pred ccee-cccc----------------------hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH---cccceeeeeeHHHH
Confidence 9995 6543 13488999999999999999999999999999 79999999999999
Q ss_pred cCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHHHHhhhhh
Q 007317 493 YGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEAEAAEL 570 (608)
Q Consensus 493 ~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~~~~~~~~ 570 (608)
|+..+|.+.|+.|+..|..+++.++.|..|+++ ++..+..++.-.++| ..+| -|+.+|-++++.+-
T Consensus 160 y~l~~Lt~~C~mfmDrnA~~lL~~~sFn~LSk~-------sL~e~l~RDsFfApE----~~IF-lAv~~W~~~Nske~ 225 (620)
T KOG4350|consen 160 YQLTDLTDYCMMFMDRNADQLLEDPSFNRLSKD-------SLKELLARDSFFAPE----LKIF-LAVRSWHQNNSKEA 225 (620)
T ss_pred hcchHHHHHHHHHHhcCHHhhhcCcchhhhhHH-------HHHHHHhhhcccchH----HHHH-HHHHHHHhcCchhh
Confidence 999999999999999999999999999999987 556666667777888 8999 99999999988443
No 8
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.79 E-value=3.9e-19 Score=179.22 Aligned_cols=191 Identities=24% Similarity=0.269 Sum_probs=160.5
Q ss_pred hhcccccCCCCCcEEEEeCC-----eEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHH
Q 007317 332 AMHISDHVDDLADVCVRVDK-----KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKM 406 (608)
Q Consensus 332 ~l~~~~~~~~~~Dv~l~~~~-----~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~l 406 (608)
++-.++++...+|+.|++++ +.|||||.|||..|++|.+||++ .|.+. ...+|.++++.+.+|..+
T Consensus 104 r~~~l~~n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g--~~a~~-------~s~ei~lpdvepaaFl~~ 174 (521)
T KOG2075|consen 104 RQAALFNNELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYG--GLAED-------ASLEIRLPDVEPAAFLAF 174 (521)
T ss_pred hhHhhccCcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhcc--Ccccc-------cCceeecCCcChhHhHHH
Confidence 44456788999999999973 67999999999999999999999 55554 457999999999999999
Q ss_pred HHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHH
Q 007317 407 IEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHW 486 (608)
Q Consensus 407 l~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~ 486 (608)
|+|||++.+. +..+ +++.++.+|++|.++.|.+.|.++|...+ .+.|.+..
T Consensus 175 L~flYsdev~-~~~d-------------------------tvi~tl~~AkKY~VpaLer~CVkflr~~l---~~~naf~~ 225 (521)
T KOG2075|consen 175 LRFLYSDEVK-LAAD-------------------------TVITTLYAAKKYLVPALERQCVKFLRKNL---MADNAFLE 225 (521)
T ss_pred HHHHhcchhh-hhHH-------------------------HHHHHHHHHHHhhhHHHHHHHHHHHHHhc---CChHHHHH
Confidence 9999999996 8888 99999999999999999999999999998 56666666
Q ss_pred HHH-HhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHHHH
Q 007317 487 LIL-SDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLEA 565 (608)
Q Consensus 487 l~~-A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~~~ 565 (608)
+-. |..++-++|...|++-|..+|......++|.+.... .+.+..+...+...++| +.++ .|+.+|.+.
T Consensus 226 L~q~A~lf~ep~Li~~c~e~id~~~~~al~~EGf~did~~-----~dt~~evl~r~~l~~~e----~~lf-eA~lkw~~~ 295 (521)
T KOG2075|consen 226 LFQRAKLFDEPSLISICLEVIDKSFEDALTPEGFCDIDST-----RDTYEEVLRRDTLEARE----FRLF-EAALKWAEA 295 (521)
T ss_pred HHHHHHhhcCHHHHHHHHHHhhhHHHhhhCccceeehhhH-----HHHHHHHHhhcccchhH----HHHH-HHHHhhccC
Confidence 655 999999999999999999999999999999876632 11233333444445556 8888 999999998
Q ss_pred hhhhh
Q 007317 566 EAAEL 570 (608)
Q Consensus 566 ~~~~~ 570 (608)
+..+.
T Consensus 296 e~~rs 300 (521)
T KOG2075|consen 296 ECQRS 300 (521)
T ss_pred cchhh
Confidence 77644
No 9
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=4.8e-19 Score=156.50 Aligned_cols=116 Identities=27% Similarity=0.318 Sum_probs=103.2
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
++.+|-+|+.||||| |.||..|+-++++.|+.+ |+|+|..+..|.|+||||+..|..+++.+|+++|+.++
T Consensus 62 nv~~ddkDdaGWtPl--------hia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~ 133 (226)
T KOG4412|consen 62 NVKPDDKDDAGWTPL--------HIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR 133 (226)
T ss_pred CCCCCCccccCCchh--------hhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc
Confidence 788888999999999 999999999999999987 99999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccc-cc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLG-CG 140 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~la-c~ 140 (608)
++|..|.| +|.+|. ..+++++|+..++..+. ++.+|.||||.| |+
T Consensus 134 ~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~--qDk~G~TpL~~al~e 182 (226)
T KOG4412|consen 134 IKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT--QDKYGFTPLHHALAE 182 (226)
T ss_pred ccccccCchhHHHHhccchhhHHHHHhcCCCCCc--ccccCccHHHHHHhc
Confidence 99999997 477776 88899999998877666 889999999988 65
No 10
>PHA02790 Kelch-like protein; Provisional
Probab=99.76 E-value=8.6e-19 Score=190.19 Aligned_cols=135 Identities=14% Similarity=0.181 Sum_probs=113.0
Q ss_pred CCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEc--CCCCHHHHHHHHHHHhcCccccChhhHHHH
Q 007317 167 DSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR--EKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (608)
Q Consensus 167 ~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l--~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (608)
.+.+|||++.+|+ .|+|||+||++.||||++||.+++.|+.. .+.+ .++++++|+.+|+|+|||++.++.++++++
T Consensus 19 ~~~~~~~~~~~~~-~~~~HR~VLAa~S~YFraMF~~~~~Es~~-~v~~~~~~v~~~~l~~lldy~YTg~l~it~~nV~~l 96 (480)
T PHA02790 19 TKKFKTIIEAIGG-NIIVNSTILKKLSPYFRTHLRQKYTKNKD-PVTRVCLDLDIHSLTSIVIYSYTGKVYIDSHNVVNL 96 (480)
T ss_pred hhhhceEEEEcCc-EEeeehhhhhhcCHHHHHHhcCCcccccc-ceEEEecCcCHHHHHHHHHhheeeeEEEecccHHHH
Confidence 4567898877654 79999999999999999999999998754 3443 489999999999999999999999999999
Q ss_pred HHHHhHhc--------HHHHHHHHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-C-CC--CCCccHHHH
Q 007317 245 VKICKVCK--------CESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PE--EDRLPAALS 303 (608)
Q Consensus 245 l~~A~~c~--------~~~L~~~l~--~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~-~-~~--~~~l~~~l~ 303 (608)
+.+|...| ++||.+.++ ||+.++.+|+.|++..|.+.+.+|+.+||. + .+ ++++..++.
T Consensus 97 l~aA~~Lqi~~v~~~C~~fL~~~l~~~NCl~i~~~A~~y~~~~L~~~a~~fi~~nF~~v~~~~~~ef~~L~~~ 169 (480)
T PHA02790 97 LRASILTSVEFIIYTCINFILRDFRKEYCVECYMMGIEYGLSNLLCHTKDFIAKHFLELEDDIIDNFDYLSMK 169 (480)
T ss_pred HHHHHHhChHHHHHHHHHHHHhhCCcchHHHHHHHHHHhCHHHHHHHHHHHHHHhHHHHhcccchhhhhCCHH
Confidence 99995544 566666554 899999999999999999999999999997 4 32 456554443
No 11
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=99.75 E-value=2.7e-18 Score=188.32 Aligned_cols=140 Identities=26% Similarity=0.427 Sum_probs=124.5
Q ss_pred CCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 167 DSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 167 ~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
.+.+|||++.+++++|+|||.||+|+||||++||.++++|.....|.+.++++.++..+++|+|||.+.++.+++++++.
T Consensus 33 ~~~lcDv~L~v~~~~~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll~y~Yt~~i~i~~~nVq~ll~ 112 (571)
T KOG4441|consen 33 EGLLCDVTLLVGDREFPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLLDYAYTGKLEISEDNVQELLE 112 (571)
T ss_pred hCCCceEEEEECCeeechHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHHHHhhcceEEechHhHHHHHH
Confidence 35578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHhc--------HHHHHHHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-C-CCCCCccHHHHHHH
Q 007317 247 ICKVCK--------CESLQRII--EKELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLPAALSRIL 306 (608)
Q Consensus 247 ~A~~c~--------~~~L~~~l--~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~-~-~~~~~l~~~l~~~~ 306 (608)
+|...| ++||.+.+ +||+.+..+|+.++++.|.+.+..|+.+||. + ..++++..+..++.
T Consensus 113 aA~~lQi~~v~~~C~~fL~~~l~~~Nclgi~~~a~~~~~~~L~~~a~~~i~~~F~~v~~~eefl~L~~~~l~ 184 (571)
T KOG4441|consen 113 AASLLQIPEVVDACCEFLESQLDPSNCLGIRRFAELHSCTELLEVADEYILQHFAEVSKTEEFLLLSLEELI 184 (571)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhccHHhhCCCHHHHH
Confidence 994333 77777754 4899999999999999999999999999997 3 66777665555443
No 12
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.74 E-value=5.2e-18 Score=158.57 Aligned_cols=255 Identities=16% Similarity=0.170 Sum_probs=157.3
Q ss_pred CCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcC--cccEEEcCCCCHHHHHHHHHHHhcCccccC---hhhHHHH
Q 007317 170 PPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYR--NEIRFSREKLSYPALYGLIHFFYSDRLEIA---VDDMEDL 244 (608)
Q Consensus 170 ~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~--~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~---~~~~~~l 244 (608)
..|+-+....+.|++||++|++|||+|+-+....-... .-..|...+++..+|.++|+|+|||+.... ..++.-
T Consensus 130 c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd~e~~ae~i~dik~ag~dm~~feafLh~l~tgEfgmEd~~fqn~di- 208 (401)
T KOG2838|consen 130 CGDLDIIFKETCFPAHRAFLAARCPFFKILANSDEEPEAEDICDIKFAGFDMDAFEAFLHSLITGEFGMEDLGFQNSDI- 208 (401)
T ss_pred eccceeeeeeccchHHHHHHHhhCcchhhhccCCCCcchhhhhhhhhhccChHHHHHHHHHHHhcccchhhcCCchHHH-
Confidence 46888888899999999999999999998876542221 122455668899999999999999998331 111111
Q ss_pred HHHHhHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHHhhhcccCCCCccccch
Q 007317 245 VKICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGSALPEEDRLPAALSRILQISLARSNMDHNIDNGIC 324 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 324 (608)
+.++++.+| ++..|+.+|+.+++.............. .
T Consensus 209 ---------------------L~QL~edFG-------------------~~kkLd~Dmkglfd~~c~~d~li~~ssD--~ 246 (401)
T KOG2838|consen 209 ---------------------LEQLCEDFG-------------------CFKKLDEDMKGLFDQDCKHDDLIIESSD--G 246 (401)
T ss_pred ---------------------HHHHHHhhC-------------------CchhhhHHHHHHHHhhcccCcEEEEecc--c
Confidence 112223333 3334445555444332211100000000 0
Q ss_pred hhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCC--CCCCCceecCC--CCH
Q 007317 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLP--GDILPCIEEHD--LSK 400 (608)
Q Consensus 325 ~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~--~~~~~~i~l~~--~~~ 400 (608)
+|-+. +..... ..+.+++||++|.++||+|||+++.. +..|+..+.. -+...+|.+.+ ++.
T Consensus 247 elvea-------fggeeN------c~deeikahkai~aaRS~ffRnLL~R--kiregeE~sdrtlr~PkRIifdE~I~Pk 311 (401)
T KOG2838|consen 247 ELVEA-------FGGEEN------CEDEEIKAHKAIAAARSKFFRNLLLR--KIREGEEGSDRTLRRPKRIIFDELIFPK 311 (401)
T ss_pred hhhhh-------cCCccc------chhHHHHHHHHHHHhhhHHHHHHHHH--HhhcccccccccccCCceeechhhhcch
Confidence 00000 000111 12357999999999999999999987 5554433222 34566787776 444
Q ss_pred HHHHHHHHHHhcCCCCCCCCCcccccchhhHhhhcCC---CCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhccc
Q 007317 401 ETFEKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSN---LPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEM 477 (608)
Q Consensus 401 ~~~~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~ 477 (608)
.....++.++||+.++ ++...-|..+++.+.++... ..-.....+.+++|+.+|.+|.++-|.+.|++.+...+
T Consensus 312 afA~i~lhclYTD~lD-lSl~hkce~SigSLSeakAitnaGkpn~~qaaeAleL~~IAlFfEfemLaQa~e~Vir~ac-- 388 (401)
T KOG2838|consen 312 AFAPIFLHCLYTDRLD-LSLAHKCEDSIGSLSEAKAITNAGKPNDLQAAEALELIEIALFFEFEMLAQACEDVIRKAC-- 388 (401)
T ss_pred hhhhhhhhhheecccc-hhhcccCCcccccHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 5556678999999995 76554344455544443221 11223345689999999999999999999999998877
Q ss_pred CCHHHHHHH
Q 007317 478 VSPAELCHW 486 (608)
Q Consensus 478 ~~~~n~~~~ 486 (608)
..++....
T Consensus 389 -aadlsn~c 396 (401)
T KOG2838|consen 389 -AADLSNGC 396 (401)
T ss_pred -hhhccccc
Confidence 55554443
No 13
>PHA02713 hypothetical protein; Provisional
Probab=99.73 E-value=1.2e-17 Score=183.87 Aligned_cols=148 Identities=19% Similarity=0.268 Sum_probs=122.1
Q ss_pred HHHhhcccccCCCCCCCCCCCCCeeEEec-CeeeehhhhhHhccCHHHHHhcccccCcCc-ccEEEcCCCCHHHHHHHHH
Q 007317 150 EVVLGISGVTSNGASNSDSFPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETDWRYRN-EIRFSREKLSYPALYGLIH 227 (608)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~-~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~-~~~i~l~~v~~~~~~~lL~ 227 (608)
.+..++.+|..+ +.+|||++.++ |+.|+|||+||+++|+||++||.+++.+.. ..+|.+.++++++|+.+|+
T Consensus 11 ~~l~~l~~lr~~------~~l~DV~L~v~~~~~f~~Hr~vLaa~S~YF~amF~~~~~e~~~~~~v~l~~v~~~~~~~ll~ 84 (557)
T PHA02713 11 RVVSNISNLLDD------DILCDVIITIGDGEEIKAHKTILAAGSKYFRTLFTTPMIIRDLVTRVNLQMFDKDAVKNIVQ 84 (557)
T ss_pred HHHHHHHHHHhC------CCCCCEEEEeCCCCEEeehHHHHhhcCHHHHHHhcCCchhhccCceEEeccCCHHHHHHHHH
Confidence 344555555444 45779999997 899999999999999999999999998764 6789999999999999999
Q ss_pred HHhcCccccChhhHHHHHHHHhHhcH--------HHHHHHHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-C-CCC
Q 007317 228 FFYSDRLEIAVDDMEDLVKICKVCKC--------ESLQRIIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEE 295 (608)
Q Consensus 228 ylYtg~~~i~~~~~~~ll~~A~~c~~--------~~L~~~l~--~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~-~-~~~ 295 (608)
|+|||+ ++.+++++++.+|..+|+ ++|.+.++ ||+.++.++..+.+..|.+.|.+|+.+||. + ..+
T Consensus 85 y~Yt~~--i~~~nv~~ll~aA~~lqi~~l~~~C~~~l~~~l~~~NCl~i~~~~~~~~~~~L~~~a~~~i~~~f~~v~~~~ 162 (557)
T PHA02713 85 YLYNRH--ISSMNVIDVLKCADYLLIDDLVTDCESYIKDYTNHDTCIYMYHRLYEMSHIPIVKYIKRMLMSNIPTLITTD 162 (557)
T ss_pred HhcCCC--CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHhhCCccchHHHHHHHHhccchHHHHHHHHHHHHHHHHHhCCh
Confidence 999997 689999999999965554 55555443 799999988999998999999999999997 3 666
Q ss_pred CCccHHHHHH
Q 007317 296 DRLPAALSRI 305 (608)
Q Consensus 296 ~~l~~~l~~~ 305 (608)
+|+..+...+
T Consensus 163 ef~~L~~~~l 172 (557)
T PHA02713 163 AFKKTVFEIL 172 (557)
T ss_pred hhhhCCHHHH
Confidence 7766554444
No 14
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.73 E-value=7.7e-18 Score=150.53 Aligned_cols=156 Identities=21% Similarity=0.311 Sum_probs=131.8
Q ss_pred HHhhcccccCCCCCcEEEEeC---CeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHH
Q 007317 330 VEAMHISDHVDDLADVCVRVD---KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKM 406 (608)
Q Consensus 330 ~~~l~~~~~~~~~~Dv~l~~~---~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~l 406 (608)
+.-...+.....|+|++|.++ ++.|+|||.|||+||+|++ |.+ +. ........+.++++++|...
T Consensus 54 LaitadL~Ek~qfSDlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN---------~~-dekse~~~~dDad~Ea~~t~ 121 (280)
T KOG4591|consen 54 LAITADLLEKEQFSDLKFKFAGNSDKHIPAHKFVLAARSDFWK--FAN---------GG-DEKSEELDLDDADFEAFHTA 121 (280)
T ss_pred HHHHHHHhhcccccceeEEecCCccccCchhhhhhhhhcchhh--hcc---------CC-CcchhhhcccccCHHHHHHh
Confidence 333445677799999999997 5789999999999999986 332 10 12345677889999999999
Q ss_pred HHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHH
Q 007317 407 IEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHW 486 (608)
Q Consensus 407 l~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~ 486 (608)
++||||+++. +..+ ++.+.++...|++|+++.|+..|++-+...+ +++||+.+
T Consensus 122 iRWIYTDEid-fk~d-----------------------D~~L~el~e~An~FqLe~Lke~C~k~l~a~l---~V~NCIk~ 174 (280)
T KOG4591|consen 122 IRWIYTDEID-FKED-----------------------DEFLLELCELANRFQLELLKERCEKGLGALL---HVDNCIKF 174 (280)
T ss_pred heeeeccccc-cccc-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhHh---hHhhHHHH
Confidence 9999999995 7776 4589999999999999999999999999998 89999999
Q ss_pred HHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhc
Q 007317 487 LILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLT 525 (608)
Q Consensus 487 l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~ 525 (608)
+.+|+..++.+|...|.+.|+.++..+- ..+|.+++..
T Consensus 175 Ye~AEe~n~~qL~n~~~eiIA~~W~dL~-~a~FaqMs~a 212 (280)
T KOG4591|consen 175 YEFAEELNARQLMNVAAEIIAGAWDDLG-KADFAQMSAA 212 (280)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhhccccC-hHHHHhccHH
Confidence 9999999999999999999999988874 3457776655
No 15
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.72 E-value=1.4e-17 Score=143.97 Aligned_cols=107 Identities=31% Similarity=0.509 Sum_probs=90.9
Q ss_pred cccccCCCCCcEEEEeC-CeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc
Q 007317 334 HISDHVDDLADVCVRVD-KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT 412 (608)
Q Consensus 334 ~~~~~~~~~~Dv~l~~~-~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt 412 (608)
+.++.++.++|++|.++ ++.|+|||.||+++|+||++||.+ . +..+....+|.++++++++|+.+++|+|+
T Consensus 2 ~~~~~~~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~--~------~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~ 73 (111)
T PF00651_consen 2 NDLFNSNEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEG--S------KFKESTVPEISLPDVSPEAFEAFLEYMYT 73 (111)
T ss_dssp HHHHHHTTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTT--T------TSTTSSEEEEEETTSCHHHHHHHHHHHHH
T ss_pred hHHHcCCCCCCEEEEECCCEEEeechhhhhccchhhhhcccc--c------ccccccccccccccccccccccccccccC
Confidence 45667789999999999 899999999999999999999998 2 12233345799999999999999999999
Q ss_pred CCCCCCC-CCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhh
Q 007317 413 DGLKDID-PDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLH 474 (608)
Q Consensus 413 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~ 474 (608)
|.+. ++ .+ ++.+++.+|++|+++.|+..|+.+|.+.
T Consensus 74 ~~~~-~~~~~-------------------------~~~~ll~lA~~~~~~~L~~~~~~~l~~~ 110 (111)
T PF00651_consen 74 GEIE-INSDE-------------------------NVEELLELADKLQIPELKKACEKFLQES 110 (111)
T ss_dssp SEEE-EE-TT-------------------------THHHHHHHHHHTTBHHHHHHHHHHHHHH
T ss_pred Cccc-CCHHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHhC
Confidence 9995 76 67 9999999999999999999999999764
No 16
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=2.6e-17 Score=145.61 Aligned_cols=119 Identities=24% Similarity=0.257 Sum_probs=108.3
Q ss_pred CCCCCCCCC-CCCCCCCCCCchhhhHhhhcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCC
Q 007317 15 EIDLDASDF-SSSVPLKKVPNGDVFEASRAGDVDRLRYIL-ESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAI 91 (608)
Q Consensus 15 ~~~l~~~d~-~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll-~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~ 91 (608)
-..+|.+++ +|+||| ||||..|+.+++.+|+ +-++.+|.+|..||||||+||..|+-++|+.|+.+ |++
T Consensus 27 ~kSL~~r~dqD~Rt~L--------Hwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad 98 (226)
T KOG4412|consen 27 PKSLNARDDQDGRTPL--------HWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD 98 (226)
T ss_pred hhhhhccccccCCcee--------eeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC
Confidence 356888877 999999 9999999999999999 57889999999999999999999999999999988 999
Q ss_pred cCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 92 CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 92 ~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
++..++.|.| +||++. ..++..+|+.+|+.+.. ++..|.||+|=|...+.
T Consensus 99 vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~--kD~~~qtplHRAAavGk 151 (226)
T KOG4412|consen 99 VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI--KDKQGQTPLHRAAAVGK 151 (226)
T ss_pred cceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc--cccccCchhHHHHhccc
Confidence 9999999998 699888 89999999999988877 89999999998765444
No 17
>PHA03098 kelch-like protein; Provisional
Probab=99.70 E-value=1.1e-16 Score=177.38 Aligned_cols=129 Identities=16% Similarity=0.327 Sum_probs=112.7
Q ss_pred CCCCCCeeEEe--cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHH
Q 007317 167 DSFPPDVVFYV--QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (608)
Q Consensus 167 ~~~~~Dv~~~v--~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (608)
++.+|||++.+ +|+.|+|||.||+++|+||++||.+++. ...|.+.+ ++++|+.+|+|+|||++.++.+++.++
T Consensus 6 ~~~~~Dv~l~~~~~~~~~~~Hk~vLaa~S~yF~~mf~~~~~---~~~i~l~~-~~~~~~~~l~y~Ytg~~~i~~~~~~~l 81 (534)
T PHA03098 6 LQKFCDESIIIVNGGGIIKVHKIILSSSSEYFKKMFKNNFK---ENEINLNI-DYDSFNEVIKYIYTGKINITSNNVKDI 81 (534)
T ss_pred cCCCCCEEEEEEcCCEEEEeHHHHHHhhhHHHHHHHhCCCC---CceEEecC-CHHHHHHHHHHhcCCceEEcHHHHHHH
Confidence 56788999998 9999999999999999999999999887 46788888 999999999999999999999999999
Q ss_pred HHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-C-CCCCCcc
Q 007317 245 VKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLP 299 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~-~-~~~~~l~ 299 (608)
+.+|..++++.|...+. ||+.++.+|..+++..|.+.|..|+.+||. + ..++++.
T Consensus 82 l~~A~~l~~~~l~~~C~~~l~~~l~~~nc~~~~~~a~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~ 148 (534)
T PHA03098 82 LSIANYLIIDFLINLCINYIIKIIDDNNCIDIYRFSFFYGCKKLYSAAYNYIRNNIELIYNDPDFIY 148 (534)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhCCHhHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCchhhc
Confidence 99997766665554432 799999999999999999999999999996 3 4444433
No 18
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.66 E-value=1.5e-16 Score=156.82 Aligned_cols=182 Identities=20% Similarity=0.258 Sum_probs=154.0
Q ss_pred cccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC--CCCHHHHHHHHHHHh
Q 007317 334 HISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--DLSKETFEKMIEYMY 411 (608)
Q Consensus 334 ~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~--~~~~~~~~~ll~yiY 411 (608)
+.++.++..+||++.+-|.+.+.||.-| .+|+||.+||+| -|+|+.. ....++|+ .++..+|..++.-+|
T Consensus 61 q~lf~q~enSDv~l~alg~eWrlHk~yL-~QS~yf~smf~G--tw~es~~-----~iIqleI~Dp~Id~~al~~a~gsLY 132 (488)
T KOG4682|consen 61 QNLFLQGENSDVILEALGFEWRLHKPYL-FQSEYFKSMFSG--TWKESSM-----NIIQLEIPDPNIDVVALQVAFGSLY 132 (488)
T ss_pred HHHHhcCCCcceehhhccceeeeeeeee-eccHHHHHHhcc--ccChhhC-----ceEEEEcCCCcccHHHHHHHHhhhh
Confidence 3456789999999999999999999999 899999999999 8988754 22334444 599999999999999
Q ss_pred cCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHh
Q 007317 412 TDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSD 491 (608)
Q Consensus 412 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~ 491 (608)
.+++ +|..+ .++.++.+|..+++++|.+.|.+.+++.| ++.|++.++..|.
T Consensus 133 ~dEv-eI~l~-------------------------dv~gvlAaA~~lqldgl~qrC~evMie~l---spkta~~yYea~c 183 (488)
T KOG4682|consen 133 RDEV-EIKLS-------------------------DVVGVLAAACLLQLDGLIQRCGEVMIETL---SPKTACGYYEAAC 183 (488)
T ss_pred hhhe-eccHH-------------------------HHHHHHHHHHHHHHhhHHHHHHHHHHHhc---ChhhhhHhhhhhh
Confidence 9999 49888 99999999999999999999999999999 9999999999999
Q ss_pred ccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCccc-ccCCCCcchHHHHHHHH
Q 007317 492 MYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAI-INVDQGNLLDDLREKWL 563 (608)
Q Consensus 492 ~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-e~~d~~~~~~~~~~~W~ 563 (608)
.||...+++.|++++..|+-.+....-|.++..+ ++..++ .++++.... | +.++ ..+.+|+
T Consensus 184 kYgle~vk~kc~ewl~~nl~~i~~~q~l~ei~~~----Lm~~ll--~SpnLfvmq~E----fdLy-ttlk~Wm 245 (488)
T KOG4682|consen 184 KYGLESVKKKCLEWLLNNLMTIQNVQLLKEISIN----LMKQLL--GSPNLFVMQVE----FDLY-TTLKKWM 245 (488)
T ss_pred hhhhHHHHHHHHHHHHHhhHhhhhHHHHHhcCHH----HHHHHh--CCCCeEEEEee----ehHH-HHHHHHH
Confidence 9999999999999999999999877755544444 432222 556666655 5 6766 8889997
No 19
>KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.61 E-value=1.3e-15 Score=150.00 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=112.5
Q ss_pred HhhcccccCCCCCCCCCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhc
Q 007317 152 VLGISGVTSNGASNSDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYS 231 (608)
Q Consensus 152 ~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYt 231 (608)
..++..|.....+ +||+|++++++|+|||+||++||.||++|+.++|.|+.+..|++.+...++|+.+|+|+||
T Consensus 32 S~~~~~l~~~e~y------~DVtfvve~~rfpAHRvILAaRs~yFRAlLYgGm~Es~q~~ipLq~t~~eAF~~lLrYiYt 105 (620)
T KOG4350|consen 32 SQSFDELFTSEDY------SDVTFVVEDTRFPAHRVILAARSSYFRALLYGGMQESHQQLIPLQETNSEAFRALLRYIYT 105 (620)
T ss_pred hHHHHHHhhcCcc------cceEEEEeccccchhhhhHHHHHHHHHHHHhhhhhhhhhcccccccccHHHHHHHHHHHhh
Confidence 3344455555554 5999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccccc---ChhhHHHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 232 DRLEI---AVDDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 232 g~~~i---~~~~~~~ll~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
|++.+ ..+.+.+++.+|..++...|...+. |+..++..|..|+.+.|...|..|+.+|-.
T Consensus 106 g~~~l~~~~ed~lld~LslAh~Ygf~~Le~aiSeYl~~iL~~~NvCmifdaA~ly~l~~Lt~~C~mfmDrnA~ 178 (620)
T KOG4350|consen 106 GKIDLAGVEEDILLDYLSLAHRYGFIQLETAISEYLKEILKNENVCMIFDAAYLYQLTDLTDYCMMFMDRNAD 178 (620)
T ss_pred cceecccchHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHcccceeeeeeHHHHhcchHHHHHHHHHHhcCHH
Confidence 99865 5567888999998877666655544 344466788999999999999999988764
No 20
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.59 E-value=3.5e-15 Score=156.39 Aligned_cols=120 Identities=21% Similarity=0.178 Sum_probs=111.5
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|.+++.+|..|.|+| ||||.+++++++++|+++|+++|..+ ..|.|||||||.+|+..++.+|+++||+++
T Consensus 68 g~~v~~~D~~g~tlL--------HWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt 139 (600)
T KOG0509|consen 68 GESVNNPDREGVTLL--------HWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPT 139 (600)
T ss_pred CcCCCCCCcCCccce--------eHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCc
Confidence 889999999999999 99999999999999999999999998 688999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|-+ +|.++. +..++-+|+..++++.. ++..|.|||+.|......
T Consensus 140 ~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~--~D~~grTpLmwAaykg~~ 191 (600)
T KOG0509|consen 140 LKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL--RDNNGRTPLMWAAYKGFA 191 (600)
T ss_pred eecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC--cCCCCCCHHHHHHHhccc
Confidence 99999998 577777 88889999999988777 899999999998875554
No 21
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.57 E-value=9.5e-15 Score=120.38 Aligned_cols=90 Identities=34% Similarity=0.493 Sum_probs=81.1
Q ss_pred cEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|+++.++|+.|++||.+|+++|+||++||.+ .|.+ .....|.++++++.+|+.+++|+|++++. ++..
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~--~~~~-------~~~~~i~l~~~~~~~f~~~l~~ly~~~~~-~~~~-- 68 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSG--DFKE-------SKKSEIYLDDVSPEDFRALLEFLYTGKLD-LPEE-- 68 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcC--CCcc-------CCCCEEEecCCCHHHHHHHHHeecCceee-cCHH--
Confidence 7899999999999999999999999999998 4333 24578999999999999999999999985 7777
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHH
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVA 468 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~ 468 (608)
++.+++.+|++|+++.|+..|+
T Consensus 69 -----------------------~~~~l~~~a~~~~~~~l~~~c~ 90 (90)
T smart00225 69 -----------------------NVEELLELADYLQIPGLVELCE 90 (90)
T ss_pred -----------------------HHHHHHHHHHHHCcHHHHhhhC
Confidence 9999999999999999999884
No 22
>PHA02946 ankyin-like protein; Provisional
Probab=99.51 E-value=6.9e-14 Score=150.30 Aligned_cols=121 Identities=17% Similarity=0.148 Sum_probs=108.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHhcCCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH--LDAARMLLESGAI 91 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~--~~~v~~Ll~~ga~ 91 (608)
.|+++|.+|..|+||| |+|+..|+.++++.|+++|+++|.+|..|+||||+|+..++ .+++++|+++|++
T Consensus 61 ~Gadvn~~d~~G~TpL--------h~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gad 132 (446)
T PHA02946 61 RGYSPNETDDDGNYPL--------HIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAK 132 (446)
T ss_pred CcCCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 4999999999999999 99999999999999999999999999999999999988764 8899999999999
Q ss_pred cCc-ccCCCCcHHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 CSE-HTFDGDRCHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 ~~~-~d~~g~~~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++. .|..|.||+.++. +.+++++|+.+|++... .+..|.||||.|+..+..
T Consensus 133 in~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~--~d~~G~t~Lh~A~~~~~~ 186 (446)
T PHA02946 133 INNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARI--VDKFGKNHIHRHLMSDNP 186 (446)
T ss_pred cccccCCCCCcHHHHHHCCChHHHHHHHhccccccc--cCCCCCCHHHHHHHhcCC
Confidence 995 6888998766666 78899999999988776 788999999998765543
No 23
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.51 E-value=8.8e-14 Score=134.23 Aligned_cols=110 Identities=19% Similarity=0.205 Sum_probs=68.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhc--CCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHc---CCHHHHHHHHhcCCC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRA--GDVDRLRYILESGVNVNARD-QWDSVALYYACLA---GHLDAARMLLESGAI 91 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~--g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~ 91 (608)
+|.+|..|.||| |+|+.. |+.+++++|+++|+++|.++ ..|+||||+|+.. ++.+++++|+++|++
T Consensus 44 ~n~~~~~g~TpL--------h~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad 115 (209)
T PHA02859 44 VNDCNDLYETPI--------FSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS 115 (209)
T ss_pred hhccCccCCCHH--------HHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC
Confidence 455566667776 666653 36666777777777766665 3566777766543 356666666666777
Q ss_pred cCcccCCCCcH-HHHHh----hHHHHHHHHhhcCCCCCCCCcccccccccc
Q 007317 92 CSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFL 137 (608)
Q Consensus 92 ~~~~d~~g~~~-~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~l 137 (608)
++..|..|.|| |.++. +.+++++|+.+|+++.. .+..|.||+|.
T Consensus 116 in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~--~d~~g~t~Lh~ 164 (209)
T PHA02859 116 ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN--KDFDNNNILYS 164 (209)
T ss_pred CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc--ccCCCCcHHHH
Confidence 76666666663 43332 45666666666666554 55666667664
No 24
>PHA02791 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.2e-13 Score=138.60 Aligned_cols=163 Identities=14% Similarity=0.155 Sum_probs=116.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.++ |+||| |+|+..|+.++++.|+..|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 52 ~ga~~n~~d--~~TpL--------h~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin 121 (284)
T PHA02791 52 AGALKNLLE--NEFPL--------HQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM 121 (284)
T ss_pred CcCCCcCCC--CCCHH--------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 377777764 78999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-c-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccchhhHHHHHHhhcccccCCCCCCCCCC
Q 007317 94 EHTFDGD-R-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSF 169 (608)
Q Consensus 94 ~~d~~g~-~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~ 169 (608)
..+..|. | +|+++. +.+++++|+.++.... ....|.||||.|+..++...-+ .+..+.......+. .+.
T Consensus 122 ~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~---d~~~g~TpLh~Aa~~g~~eiv~-lLL~~gAd~n~~d~---~g~ 194 (284)
T PHA02791 122 FYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---DLAILLSCIHITIKNGHVDMMI-LLLDYMTSTNTNNS---LLF 194 (284)
T ss_pred ccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc---ccccCccHHHHHHHcCCHHHHH-HHHHCCCCCCcccC---CCC
Confidence 8888885 5 566666 8889999998764321 1124789999999877743321 12223333222211 122
Q ss_pred CCCeeEEecCeeeehhhhhHhccC
Q 007317 170 PPDVVFYVQGRPIEAHRVILSARS 193 (608)
Q Consensus 170 ~~Dv~~~v~~~~~~~Hk~iL~arS 193 (608)
.+++...+......+=+.+|....
T Consensus 195 t~~L~~Aa~~~~~e~v~lLl~~Ga 218 (284)
T PHA02791 195 IPDIKLAIDNKDLEMLQALFKYDI 218 (284)
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCC
Confidence 334444454445555566665443
No 25
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.49 E-value=1.2e-13 Score=150.82 Aligned_cols=117 Identities=21% Similarity=0.164 Sum_probs=107.4
Q ss_pred CCCCCCCCCCC-CCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFS-SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~-g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|+++|.++.. |+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 156 ~gadin~~~~~~g~tpL--------h~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i 227 (477)
T PHA02878 156 YGADINMKDRHKGNTAL--------HYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST 227 (477)
T ss_pred cCCCCCccCCCCCCCHH--------HHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 49999999999 99999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCc-HHHHHh---hHHHHHHHHhhcCCCCCCCCcc-ccccccccccc
Q 007317 93 SEHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCG 140 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~---~~~~~~~L~~~~~~~~~~~~~~-~g~t~l~lac~ 140 (608)
+..|..|.| +|+|+. +.+++++|+.+|++++. ... .|.||||.|+.
T Consensus 228 n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~--~~~~~g~TpLh~A~~ 278 (477)
T PHA02878 228 DARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNA--KSYILGLTALHSSIK 278 (477)
T ss_pred CCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCc--cCCCCCCCHHHHHcc
Confidence 999999998 577764 67899999999998766 443 69999999954
No 26
>PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation []. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule []. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [, , ]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.; GO: 0005515 protein binding; PDB: 3M5B_A 1R28_B 3LBZ_A 3E4U_F 3BIM_B 1R2B_A 1R29_A 2VPK_A 2YY9_B 3GA1_A ....
Probab=99.49 E-value=1.4e-13 Score=118.75 Aligned_cols=95 Identities=26% Similarity=0.440 Sum_probs=79.7
Q ss_pred CCCCCeeEEec-CeeeehhhhhHhccCHHHHHhcccc-cCcCcccEEEcCCCCHHHHHHHHHHHhcCccccC-hhhHHHH
Q 007317 168 SFPPDVVFYVQ-GRPIEAHRVILSARSVFFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIA-VDDMEDL 244 (608)
Q Consensus 168 ~~~~Dv~~~v~-~~~~~~Hk~iL~arS~~F~~lf~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~-~~~~~~l 244 (608)
+.++|+++.++ +..|+|||.+|+++|+||+++|.+. +.+.....|.++++++++|..+++|+|+|++.++ .+++..+
T Consensus 8 ~~~~D~~i~v~d~~~~~vhk~iL~~~S~~F~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~~l 87 (111)
T PF00651_consen 8 NEFSDVTIRVGDGKTFYVHKNILAARSPYFRNLFEGSKFKESTVPEISLPDVSPEAFEAFLEYMYTGEIEINSDENVEEL 87 (111)
T ss_dssp TTS--EEEEETTTEEEEE-HHHHHHHBHHHHHHHTTTTSTTSSEEEEEETTSCHHHHHHHHHHHHHSEEEEE-TTTHHHH
T ss_pred CCCCCEEEEECCCEEEeechhhhhccchhhhhcccccccccccccccccccccccccccccccccCCcccCCHHHHHHHH
Confidence 45779999999 8999999999999999999999988 5666667899999999999999999999999998 8888888
Q ss_pred HHHHhHhcHHHHHHHHHH
Q 007317 245 VKICKVCKCESLQRIIEK 262 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~~ 262 (608)
+.+|+.++++.|.+.+..
T Consensus 88 l~lA~~~~~~~L~~~~~~ 105 (111)
T PF00651_consen 88 LELADKLQIPELKKACEK 105 (111)
T ss_dssp HHHHHHTTBHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHH
Confidence 888877766666555543
No 27
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.48 E-value=1.8e-13 Score=137.42 Aligned_cols=118 Identities=18% Similarity=0.119 Sum_probs=102.5
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC----CCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD----QWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d----~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
+-.+|..|+|++ ||.|+..|+.++++.|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++
T Consensus 25 ~~~~d~~~~~~l-------L~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN 97 (300)
T PHA02884 25 IKKKNKICIANI-------LYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN 97 (300)
T ss_pred hhccCcCCCCHH-------HHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC
Confidence 456788999987 478888899999999999999999974 589999999999999999999999999999
Q ss_pred cc-cCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EH-TFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~-d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.. +..|.|| |.++. +.+++++|+.+|++++. .+..|.||+|+|+..+..
T Consensus 98 ~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~--kd~~G~TpL~~A~~~~~~ 150 (300)
T PHA02884 98 RYAEEAKITPLYISVLHGCLKCLEILLSYGADINI--QTNDMVTPIELALMICNN 150 (300)
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHhCCh
Confidence 86 4578875 66665 89999999999998877 778899999999875544
No 28
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.48 E-value=2e-13 Score=147.24 Aligned_cols=121 Identities=23% Similarity=0.262 Sum_probs=111.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.++..|.||| |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 113 ~g~d~n~~~~~g~T~L--------h~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n 184 (434)
T PHA02874 113 CGIDVNIKDAELKTFL--------HYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184 (434)
T ss_pred CcCCCCCCCCCCccHH--------HHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..+..|.| +|+++. +.+++++|+.+|..... ....|.||||.|+..+..
T Consensus 185 ~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~--~~~~g~TpL~~A~~~~~~ 236 (434)
T PHA02874 185 VKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN--KCKNGFTPLHNAIIHNRS 236 (434)
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcC--CCCCCCCHHHHHHHCChH
Confidence 99999998 577776 89999999999988765 677899999999986553
No 29
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.48 E-value=1.1e-13 Score=145.25 Aligned_cols=120 Identities=20% Similarity=0.189 Sum_probs=106.9
Q ss_pred CCCCCCCCC-CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASD-FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d-~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|+++|+.. .-|.||| |||+++|++.++..|+++|||++.+|.+|.+|+|+|+..|+.-.+-||+..|+++
T Consensus 100 ~gadvn~~gG~l~stPL--------HWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~ 171 (600)
T KOG0509|consen 100 HGADVNAIGGVLGSTPL--------HWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADI 171 (600)
T ss_pred cCCCccccCCCCCCCcc--------hHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccC
Confidence 599999998 7789999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCc-ccccccccccccccc
Q 007317 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL-QAALRDTFLGCGANR 143 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~-~~g~t~l~lac~~~~ 143 (608)
+.+|.+|+| +++||. ....+..|+..++.... .+ ..|-||||.|+.+.+
T Consensus 172 d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~--~d~~~g~TpLHwa~~~gN 224 (600)
T KOG0509|consen 172 DLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLL--TDDNHGNTPLHWAVVGGN 224 (600)
T ss_pred CCcCCCCCCHHHHHHHhcccHHHHHHHHhcccccc--cccccCCchHHHHHhcCC
Confidence 999999998 588887 33327778888877665 44 789999999997554
No 30
>PHA02741 hypothetical protein; Provisional
Probab=99.48 E-value=2.6e-13 Score=126.57 Aligned_cols=117 Identities=17% Similarity=0.119 Sum_probs=102.1
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHH------cCCCCCCCCCCCCcHHHHHHHcCC----HHHHHHHHh
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE------SGVNVNARDQWDSVALYYACLAGH----LDAARMLLE 87 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~------~g~~in~~d~~g~tpLh~A~~~g~----~~~v~~Ll~ 87 (608)
++.+|..|.||| |+|+..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|+.
T Consensus 14 ~~~~~~~g~t~L--------h~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~ 85 (169)
T PHA02741 14 IAEKNSEGENFF--------HEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIE 85 (169)
T ss_pred hhccccCCCCHH--------HHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHH
Confidence 567888999999 99999999999998854 368899999999999999999999 589999999
Q ss_pred cCCCcCcccC-CCCc-HHHHHh--hHHHHHHHHh-hcCCCCCCCCcccccccccccccccch
Q 007317 88 SGAICSEHTF-DGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 88 ~ga~~~~~d~-~g~~-~~~aa~--~~~~~~~L~~-~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+|++++.++. .|.| +|+++. +.+++++|+. .++++.. .+..|.||||+|+..+..
T Consensus 86 ~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~--~n~~g~tpL~~A~~~~~~ 145 (169)
T PHA02741 86 LGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHF--CNADNKSPFELAIDNEDV 145 (169)
T ss_pred cCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc--CCCCCCCHHHHHHHCCCH
Confidence 9999999885 8887 577777 8899999997 5877765 678999999999987664
No 31
>PHA02791 ankyrin-like protein; Provisional
Probab=99.48 E-value=1.6e-13 Score=137.76 Aligned_cols=114 Identities=19% Similarity=0.126 Sum_probs=102.1
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCC
Q 007317 19 DASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (608)
Q Consensus 19 ~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 98 (608)
+.+|.+|+||| |+|+..|+.++++.|+++|++++.++ |+||||+|+..|+.+++++|+.+|++++..|..
T Consensus 24 ~~~D~~G~TpL--------h~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~ 93 (284)
T PHA02791 24 FKADVHGHSAL--------YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDK 93 (284)
T ss_pred CCCCCCCCcHH--------HHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 57899999999 99999999999999999999998875 789999999999999999999999999999999
Q ss_pred CCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccc-ccccccccccch
Q 007317 99 GDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAAL-RDTFLGCGANRQ 144 (608)
Q Consensus 99 g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~-t~l~lac~~~~~ 144 (608)
|.| +|+++. +.+++++|+.+|++... +...|+ ||||.|+..++.
T Consensus 94 G~TpLh~Aa~~g~~eivk~Ll~~gadin~--~~~~g~~TpL~~Aa~~g~~ 141 (284)
T PHA02791 94 GNTALYYAVDSGNMQTVKLFVKKNWRLMF--YGKTGWKTSFYHAVMLNDV 141 (284)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCcCc--cCCCCCcHHHHHHHHcCCH
Confidence 998 577777 89999999999988765 556664 899999986654
No 32
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.45 E-value=3.1e-13 Score=147.59 Aligned_cols=117 Identities=21% Similarity=0.222 Sum_probs=107.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-GHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~ga~~ 92 (608)
.|+++|.+|..|+||| |.|+..|+.++++.|+++|++++.+|..|+||||+|+.. ++.+++++|+++|+++
T Consensus 190 ~gad~n~~d~~g~tpL--------h~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadv 261 (477)
T PHA02878 190 YGANVNIPDKTNNSPL--------HHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDV 261 (477)
T ss_pred CCCCCCCcCCCCCCHH--------HHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCC
Confidence 4899999999999999 999999999999999999999999999999999999975 7999999999999999
Q ss_pred CcccC-CCCcH-HHHHhhHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 93 SEHTF-DGDRC-HYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 93 ~~~d~-~g~~~-~~aa~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
+..+. .|.|| |.|+.+.+++++|+.+|++++. .+..|.|||+.|+.
T Consensus 262 n~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~--~d~~g~TpL~~A~~ 309 (477)
T PHA02878 262 NAKSYILGLTALHSSIKSERKLKLLLEYGADINS--LNSYKLTPLSSAVK 309 (477)
T ss_pred CccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHH
Confidence 98886 78875 6665588899999999999877 78899999999986
No 33
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.45 E-value=2.4e-13 Score=119.73 Aligned_cols=82 Identities=28% Similarity=0.283 Sum_probs=54.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
+|.+|.+|.||| |.|+.+||+++++.|+..|++++.+...||||||-||..++.+++-+|+.+|++++....
T Consensus 90 vNtrD~D~YTpL--------HRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~ 161 (228)
T KOG0512|consen 90 VNTRDEDEYTPL--------HRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTK 161 (228)
T ss_pred ccccccccccHH--------HHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCccccccc
Confidence 666666666666 666666666666666666666666666666666666666666666666666666666655
Q ss_pred CCCc-HHHHHh
Q 007317 98 DGDR-CHYAAL 107 (608)
Q Consensus 98 ~g~~-~~~aa~ 107 (608)
...| +|.+|.
T Consensus 162 g~ltpLhlaa~ 172 (228)
T KOG0512|consen 162 GLLTPLHLAAG 172 (228)
T ss_pred ccchhhHHhhc
Confidence 5555 344444
No 34
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.44 E-value=2.3e-13 Score=128.86 Aligned_cols=115 Identities=24% Similarity=0.241 Sum_probs=107.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
.-|+|.-|+.|.+|| ||||+.||..+++.|+.+|+.+|..+...-||||+|+..||.+++..|+++.++++.
T Consensus 24 ehdln~gddhgfspl--------hwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna 95 (448)
T KOG0195|consen 24 EHDLNVGDDHGFSPL--------HWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA 95 (448)
T ss_pred ccccccccccCcchh--------hhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch
Confidence 678999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccc
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac 139 (608)
.+.+|.+ +||+|. ...+.+-|+..|+..++ ..+.|-||+..|-
T Consensus 96 vnehgntplhyacfwgydqiaedli~~ga~v~i--cnk~g~tpldkak 141 (448)
T KOG0195|consen 96 VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNI--CNKKGMTPLDKAK 141 (448)
T ss_pred hhccCCCchhhhhhhcHHHHHHHHHhccceeee--cccCCCCchhhhc
Confidence 9999997 699998 88888999999988877 7889999998643
No 35
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.43 E-value=1.2e-13 Score=139.02 Aligned_cols=119 Identities=23% Similarity=0.381 Sum_probs=100.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|..+..+.||| --||..||++++++|+++|+|++..|..|.|.||+||..||.+++++|++.|++++
T Consensus 106 ~ga~VN~tT~TNStPL--------raACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn 177 (615)
T KOG0508|consen 106 RGASVNDTTRTNSTPL--------RAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN 177 (615)
T ss_pred hcCccccccccCCccH--------HHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc
Confidence 3788888888888888 88899999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.++..|.| +|.++. +.+++++|+.+|+...+ +..|-|||-.|...+.
T Consensus 178 ~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~---d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 178 AKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV---DGHGMTPLLLAAVTGH 227 (615)
T ss_pred hhcccCchHHHhhhhcccHHHHHHHHhCCceeee---cCCCCchHHHHhhhcc
Confidence 99998988 566665 88889999998887665 5558888887766444
No 36
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.42 E-value=6.8e-13 Score=128.08 Aligned_cols=108 Identities=13% Similarity=0.091 Sum_probs=81.5
Q ss_pred CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCcCccc-CC
Q 007317 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARMLLESGAICSEHT-FD 98 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~ga~~~~~d-~~ 98 (608)
...++||| |+|+..|+.+.++.|++. ++.+|..|.||||+|+..+ +.+++++|+++|++++..+ ..
T Consensus 18 ~~~~~~pL--------~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~ 86 (209)
T PHA02859 18 FYRYCNPL--------FYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDN 86 (209)
T ss_pred hhccCcHH--------HHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCC
Confidence 45678888 888888888888888865 4567778888888888744 7888888888888888776 36
Q ss_pred CCc-HHHHHh-----hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 99 GDR-CHYAAL-----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 99 g~~-~~~aa~-----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
|.| +|+++. +.+++++|+.+|++++. .+..|.||||.|+...
T Consensus 87 g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~--~d~~G~TpLh~a~~~~ 134 (209)
T PHA02859 87 NLSALHHYLSFNKNVEPEILKILIDSGSSITE--EDEDGKNLLHMYMCNF 134 (209)
T ss_pred CCCHHHHHHHhCccccHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhc
Confidence 776 465543 46788888888877766 6778888888876543
No 37
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.42 E-value=1.7e-13 Score=125.11 Aligned_cols=118 Identities=20% Similarity=0.220 Sum_probs=108.1
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
...+|+.|+.|.||| .||+..|+++++++|++.|++++...+...|+|.+|+..|-.+++++|+.++.++|.
T Consensus 150 ~n~VN~~De~GfTpL--------iWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv 221 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPL--------IWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV 221 (296)
T ss_pred hccccCccccCchHh--------HHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce
Confidence 566999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
-|.+|.| +.++++ +.++++.|++.|+.+.. .+.-|.+++.+|+.-+
T Consensus 222 yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~--e~dsGy~~mdlAValG 270 (296)
T KOG0502|consen 222 YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQ--EDDSGYWIMDLAVALG 270 (296)
T ss_pred eccCCCceeeeeecCChHHHHHHHHhcCCCccc--ccccCCcHHHHHHHhh
Confidence 9999997 577777 89999999999999887 7888999998887633
No 38
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.42 E-value=7.2e-13 Score=142.10 Aligned_cols=120 Identities=16% Similarity=0.130 Sum_probs=78.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC-----------------------------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ----------------------------- 64 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~----------------------------- 64 (608)
.|+++|.++..|.||| |+|+..|+.+++++|+++|++++..+.
T Consensus 24 ~g~~~n~~~~~g~tpL--------~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 95 (413)
T PHA02875 24 IGINPNFEIYDGISPI--------KLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFAD 95 (413)
T ss_pred CCCCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCccc
Confidence 4899999999999999 888888888888888887777665543
Q ss_pred -----CCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccc
Q 007317 65 -----WDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTF 136 (608)
Q Consensus 65 -----~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 136 (608)
.|+||||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+.+|+.... .+..|.||||
T Consensus 96 ~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~--~d~~g~TpL~ 173 (413)
T PHA02875 96 DVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI--EDCCGCTPLI 173 (413)
T ss_pred ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--CCCCCCCHHH
Confidence 4556666666666666666666666666666655555 344444 55556666665555443 4555666666
Q ss_pred ccccccc
Q 007317 137 LGCGANR 143 (608)
Q Consensus 137 lac~~~~ 143 (608)
+|+..+.
T Consensus 174 ~A~~~g~ 180 (413)
T PHA02875 174 IAMAKGD 180 (413)
T ss_pred HHHHcCC
Confidence 6665443
No 39
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.42 E-value=4.5e-13 Score=149.14 Aligned_cols=115 Identities=15% Similarity=0.061 Sum_probs=77.7
Q ss_pred C-CCCCCC-CCCCCCCCCCCCchhhhHhhh--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC--HHHHHHHHhc
Q 007317 15 E-IDLDAS-DFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH--LDAARMLLES 88 (608)
Q Consensus 15 ~-~~l~~~-d~~g~tpL~~~~~~~l~~A~~--~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~--~~~v~~Ll~~ 88 (608)
| +++|.+ |..|+||| |.|+. .++.+++++|+++|+++|.+|..|+||||+|+..|+ .+++++|+++
T Consensus 165 G~ADIN~~~d~~G~TpL--------H~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~ 236 (764)
T PHA02716 165 GIVNLNYVCKKTGYGIL--------HAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIEL 236 (764)
T ss_pred CCCCcccccCCCCCcHH--------HHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHc
Confidence 5 777776 77777777 76543 356677777777777777777777777777777774 3677777777
Q ss_pred CCCcCcccCCCCcH-HHHH-------------------------------------h--hHHHHHHHHhhcCCCCCCCCc
Q 007317 89 GAICSEHTFDGDRC-HYAA-------------------------------------L--NLKVRKLLKAYEARPPPLGPL 128 (608)
Q Consensus 89 ga~~~~~d~~g~~~-~~aa-------------------------------------~--~~~~~~~L~~~~~~~~~~~~~ 128 (608)
||+++.+|..|.|| |+++ . +.+++++|+.+|++.+. ++
T Consensus 237 GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~--kD 314 (764)
T PHA02716 237 GGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHY--KD 314 (764)
T ss_pred CCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceec--cC
Confidence 77777777777764 3321 1 34566777777766554 56
Q ss_pred ccccccccccc
Q 007317 129 QAALRDTFLGC 139 (608)
Q Consensus 129 ~~g~t~l~lac 139 (608)
..|.||||.|+
T Consensus 315 ~~G~TPLH~Aa 325 (764)
T PHA02716 315 SAGRTCLHQYI 325 (764)
T ss_pred CCCCCHHHHHH
Confidence 67777777654
No 40
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.42 E-value=5.4e-13 Score=117.52 Aligned_cols=110 Identities=27% Similarity=0.259 Sum_probs=98.8
Q ss_pred CCchhhhHhhhcCCHHHHHHHHHcCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--
Q 007317 32 VPNGDVFEASRAGDVDRLRYILESGVN-VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL-- 107 (608)
Q Consensus 32 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~-in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~-- 107 (608)
++...+.+|+..+.+..++.|++-.++ +|.+|..|+||||-|+++||.+++..|+..||+++.+...|+|| |-+|.
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 455667899999999999999997776 99999999999999999999999999999999999999999984 66766
Q ss_pred hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 108 ~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+.+++..|+.+|++.+. ......||||+||..+.
T Consensus 142 N~~va~~LLqhgaDVnA--~t~g~ltpLhlaa~~rn 175 (228)
T KOG0512|consen 142 NFEVAGRLLQHGADVNA--QTKGLLTPLHLAAGNRN 175 (228)
T ss_pred chhHHHHHHhccCcccc--cccccchhhHHhhcccc
Confidence 99999999999999877 56677899999997544
No 41
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.42 E-value=8e-13 Score=122.75 Aligned_cols=119 Identities=13% Similarity=0.119 Sum_probs=74.7
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHH---HHHHHh
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDV----DRLRYILESGVNVNARDQWDSVALYYACLAGHLDA---ARMLLE 87 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~----~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~---v~~Ll~ 87 (608)
+++++..+..+.+++ |+||+.|++ ++++.|++.|++++.+|..|+||||+|+..|+.+. +++|++
T Consensus 10 ~~~~~~~~~~~~~~l--------~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~ 81 (166)
T PHA02743 10 NLGAVEIDEDEQNTF--------LRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVN 81 (166)
T ss_pred chHHhhhccCCCcHH--------HHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHH
Confidence 555666666666666 667777766 44445556666666666677777777776666443 566677
Q ss_pred cCCCcCccc-CCCCc-HHHHHh--hHHHHHHHHh-hcCCCCCCCCcccccccccccccccc
Q 007317 88 SGAICSEHT-FDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 88 ~ga~~~~~d-~~g~~-~~~aa~--~~~~~~~L~~-~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+|++++.++ ..|.| +|+++. +.+++++|+. .++++.. .+..|.||+|+|+..+.
T Consensus 82 ~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 82 MGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGA--INYQHETAYHIAYKMRD 140 (166)
T ss_pred cCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccC--cCCCCCCHHHHHHHcCC
Confidence 777777666 35665 455555 5666666663 5655544 55666777777666544
No 42
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.41 E-value=9.6e-13 Score=144.04 Aligned_cols=120 Identities=20% Similarity=0.209 Sum_probs=100.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhh--hcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEAS--RAGDVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARMLLESG 89 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~--~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g 89 (608)
.|++++..|..|.||| |+|+ ..|+.++++.|+++|++++..+..|.||||+|+..| +.+++++|+++|
T Consensus 95 ~ga~i~~~d~~g~tpL--------~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g 166 (480)
T PHA03100 95 YGANVNAPDNNGITPL--------LYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKG 166 (480)
T ss_pred CCCCCCCCCCCCCchh--------hHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCC
Confidence 4888888999999999 9999 889999999999999999988888999999999988 899999999999
Q ss_pred CCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccc------cccccccccccc
Q 007317 90 AICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAA------LRDTFLGCGANR 143 (608)
Q Consensus 90 a~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g------~t~l~lac~~~~ 143 (608)
++++..+..|.|| |+|+. +.+++++|+.+|+++.. ....| .||+|.|+..+.
T Consensus 167 ~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~--~~~~~~~~~~~~t~l~~a~~~~~ 227 (480)
T PHA03100 167 VDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINA--GDIETLLFTIFETPLHIAACYNE 227 (480)
T ss_pred CCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC--CCCCCCcHHHHHhHHHHHHHhCc
Confidence 9988888888874 66666 78888888888887765 45555 788888887665
No 43
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.41 E-value=4e-13 Score=124.74 Aligned_cols=102 Identities=16% Similarity=0.155 Sum_probs=91.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHH---HHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHh-cC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDR---LRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SG 89 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~---~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~g 89 (608)
|++++.+|..|+||| |+|+..|+.+. +++|++.|+++|.++ ..|.||||+|+..|+.+++++|+. .|
T Consensus 47 g~~~~~~d~~g~t~L--------h~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g 118 (166)
T PHA02743 47 GHLLHRYDHHGRQCT--------HMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLG 118 (166)
T ss_pred chhhhccCCCCCcHH--------HHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC
Confidence 677888999999999 99999988654 789999999999998 589999999999999999999995 79
Q ss_pred CCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCC
Q 007317 90 AICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPP 124 (608)
Q Consensus 90 a~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~ 124 (608)
++++..+..|.|| |+++. +.+++++|+.+|++...
T Consensus 119 ad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~ 156 (166)
T PHA02743 119 VNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDD 156 (166)
T ss_pred CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999985 66666 78999999999988766
No 44
>PHA03095 ankyrin-like protein; Provisional
Probab=99.41 E-value=1.1e-12 Score=143.26 Aligned_cols=120 Identities=21% Similarity=0.161 Sum_probs=109.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG-HLDAARMLLESG 89 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g---~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~g 89 (608)
.|+++|.++..|.||| |+|+..| +.++++.|+++|+++|.++..|+||||+|+..| +.+++++|+++|
T Consensus 36 ~ga~vn~~~~~g~t~L--------h~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g 107 (471)
T PHA03095 36 AGADVNFRGEYGKTPL--------HLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAG 107 (471)
T ss_pred cCCCcccCCCCCCCHH--------HHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC
Confidence 4999999999999999 9999998 999999999999999999999999999999999 599999999999
Q ss_pred CCcCcccCCCCc-HHHHHh----hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 90 AICSEHTFDGDR-CHYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 90 a~~~~~d~~g~~-~~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
++++..+..|.| +|+++. +.+++++|+.+|++++. .+..|.||+|+++....
T Consensus 108 a~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~--~d~~g~tpL~~a~~~~~ 164 (471)
T PHA03095 108 ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA--LDLYGMTPLAVLLKSRN 164 (471)
T ss_pred CCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHHHcCC
Confidence 999999999998 577773 67899999999998776 78889999998876553
No 45
>PHA03095 ankyrin-like protein; Provisional
Probab=99.39 E-value=1.6e-12 Score=141.88 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcC-CHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHhcCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAG-DVDRLRYILESGVNVNARDQWDSVALYYAC--LAGHLDAARMLLESGA 90 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g-~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~ga 90 (608)
.|+++|.++..|+||| |+|+..| +.++++.|+++|++++.+|..|+||||+|+ ..++.+++++|+++|+
T Consensus 72 ~Gadin~~~~~g~TpL--------h~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~ga 143 (471)
T PHA03095 72 AGADVNAPERCGFTPL--------HLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGA 143 (471)
T ss_pred CCCCCCCCCCCCCCHH--------HHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCC
Confidence 4999999999999999 9999999 599999999999999999999999999999 5678999999999999
Q ss_pred CcCcccCCCCcH-HHHHh----hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 91 ICSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 91 ~~~~~d~~g~~~-~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+++..|..|.|| |.++. +.+++++|+.+|++... .+..|.||||.++...+
T Consensus 144 d~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~--~d~~g~t~Lh~~~~~~~ 199 (471)
T PHA03095 144 DVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA--VDDRFRSLLHHHLQSFK 199 (471)
T ss_pred CCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHHCC
Confidence 999999999985 55544 57889999999988766 57789999999886543
No 46
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.38 E-value=1.7e-12 Score=140.14 Aligned_cols=118 Identities=19% Similarity=0.177 Sum_probs=104.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|.||| |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++
T Consensus 146 ~gad~n~~d~~g~tpL--------h~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~ 217 (434)
T PHA02874 146 YGADVNIEDDNGCYPI--------HIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIM 217 (434)
T ss_pred CCCCCCCcCCCCCCHH--------HHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCc
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh-hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 94 EHTFDGDRC-HYAAL-NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~-~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
..+..|.|| |.++. ....+.+|+ .+...+. .+..|.||||+|+..+
T Consensus 218 ~~~~~g~TpL~~A~~~~~~~i~~Ll-~~~~in~--~d~~G~TpLh~A~~~~ 265 (434)
T PHA02874 218 NKCKNGFTPLHNAIIHNRSAIELLI-NNASIND--QDIDGSTPLHHAINPP 265 (434)
T ss_pred CCCCCCCCHHHHHHHCChHHHHHHH-cCCCCCC--cCCCCCCHHHHHHhcC
Confidence 999999985 66666 556666666 3555544 7889999999999643
No 47
>smart00225 BTB Broad-Complex, Tramtrack and Bric a brac. Domain in Broad-Complex, Tramtrack and Bric a brac. Also known as POZ (poxvirus and zinc finger) domain. Known to be a protein-protein interaction motif found at the N-termini of several C2H2-type transcription factors as well as Shaw-type potassium channels. Known structure reveals a tightly intertwined dimer formed via interactions between N-terminal strand and helix structures. However in a subset of BTB/POZ domains, these two secondary structures appear to be missing. Be aware SMART predicts BTB/POZ domains without the beta1- and alpha1-secondary structures.
Probab=99.38 E-value=1.7e-12 Score=106.75 Aligned_cols=89 Identities=22% Similarity=0.496 Sum_probs=79.4
Q ss_pred CeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHHHhHh
Q 007317 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVC 251 (608)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~A~~c 251 (608)
|+++.++|+.|++||.+|+++|+||++||.+++.+.....+.++++++.+|..+++|+|+|++.++..++..++.+|..+
T Consensus 1 dv~i~v~~~~~~~h~~iL~~~s~~f~~~~~~~~~~~~~~~i~l~~~~~~~f~~~l~~ly~~~~~~~~~~~~~l~~~a~~~ 80 (90)
T smart00225 1 DVTLVVGGKKFKAHKAVLAACSPYFKALFSGDFKESKKSEIYLDDVSPEDFRALLEFLYTGKLDLPEENVEELLELADYL 80 (90)
T ss_pred CeEEEECCEEEehHHHHHhhcCHHHHHHHcCCCccCCCCEEEecCCCHHHHHHHHHeecCceeecCHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999988777677888899999999999999999999999888888888888887
Q ss_pred cHHHHHHHH
Q 007317 252 KCESLQRII 260 (608)
Q Consensus 252 ~~~~L~~~l 260 (608)
+++.|...+
T Consensus 81 ~~~~l~~~c 89 (90)
T smart00225 81 QIPGLVELC 89 (90)
T ss_pred CcHHHHhhh
Confidence 766665543
No 48
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.37 E-value=1.7e-12 Score=102.31 Aligned_cols=92 Identities=26% Similarity=0.439 Sum_probs=73.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|.++|..- .|++|| |+|+-.|.++++++|+..|++++.+|+.|.|||.-|.+.||.+||++|+++|++-..
T Consensus 25 g~nVn~~~-ggR~pl--------hyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~ 95 (117)
T KOG4214|consen 25 GLNVNEIY-GGRTPL--------HYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTI 95 (117)
T ss_pred cccHHHHh-CCcccc--------hHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccce
Confidence 44555444 788888 888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCcHHHHHhhHHHHHHH
Q 007317 95 HTFDGDRCHYAALNLKVRKLL 115 (608)
Q Consensus 95 ~d~~g~~~~~aa~~~~~~~~L 115 (608)
...+|.++..++.+.++.++|
T Consensus 96 ~~PdG~~~~eate~edIr~LL 116 (117)
T KOG4214|consen 96 HAPDGTALIEATEEEDIRELL 116 (117)
T ss_pred eCCCchhHHhhccHHHHHHHh
Confidence 888888777777666665554
No 49
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.37 E-value=1.6e-12 Score=144.76 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=101.3
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCC--HHHHHHHHHcCCCCCCCCCCCCcHHHHH--------------------
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGD--VDRLRYILESGVNVNARDQWDSVALYYA-------------------- 73 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~--~~~~~~Ll~~g~~in~~d~~g~tpLh~A-------------------- 73 (608)
+++|.+|..|+||| |+|+..|+ .++++.|+++|+++|.+|..|+||||+|
T Consensus 203 ADVN~kD~~G~TPL--------H~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d 274 (764)
T PHA02716 203 VNVNLQNNHLITPL--------HTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLD 274 (764)
T ss_pred CCCCCCCCCCCCHH--------HHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcc
Confidence 68999999999999 99999996 4899999999999999999999999975
Q ss_pred -----------------HHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh----hHHHHHHHHhhcCCCCCCCCcccc
Q 007317 74 -----------------CLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAA 131 (608)
Q Consensus 74 -----------------~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g 131 (608)
+..|+.+++++|+++|++++.+|..|.|| |+++. +.+++++|+.+|++++. ++..|
T Consensus 275 ~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~--kD~~G 352 (764)
T PHA02716 275 GNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE--PDNIG 352 (764)
T ss_pred ccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc--CCCCC
Confidence 34578899999999999999999999985 65543 57899999999988766 78899
Q ss_pred ccccccccc
Q 007317 132 LRDTFLGCG 140 (608)
Q Consensus 132 ~t~l~lac~ 140 (608)
.||||.|+.
T Consensus 353 ~TPLH~A~~ 361 (764)
T PHA02716 353 NTVLHTYLS 361 (764)
T ss_pred CCHHHHHHH
Confidence 999998764
No 50
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.37 E-value=1.9e-12 Score=141.69 Aligned_cols=121 Identities=19% Similarity=0.280 Sum_probs=108.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g--~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
.|++++.++..|+||| |+|+..| +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 130 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~ 201 (480)
T PHA03100 130 NGANVNIKNSDGENLL--------HLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGAD 201 (480)
T ss_pred cCCCCCccCCCCCcHH--------HHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 4899999999999999 9999999 99999999999999999999999999999999999999999999999
Q ss_pred cCcccCCC------Cc-HHHHHh--h--HHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 CSEHTFDG------DR-CHYAAL--N--LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 ~~~~d~~g------~~-~~~aa~--~--~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++..+..| .+ +|.++. + .+++++|+.+|++++. ++..|.||||.|+..+..
T Consensus 202 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~--~d~~g~TpL~~A~~~~~~ 263 (480)
T PHA03100 202 INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI--KDVYGFTPLHYAVYNNNP 263 (480)
T ss_pred ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHcCCH
Confidence 99888887 55 466666 5 8899999999988766 678899999999987663
No 51
>PHA02798 ankyrin-like protein; Provisional
Probab=99.36 E-value=3.6e-12 Score=139.57 Aligned_cols=118 Identities=17% Similarity=0.171 Sum_probs=96.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhc-----CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRA-----GDVDRLRYILESGVNVNARDQWDSVALYYACLAG---HLDAARML 85 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~-----g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g---~~~~v~~L 85 (608)
.|+++|.+|..|.||| |.|+.. ++.++++.|+++|+++|.+|..|+||||+|+..| +.+++++|
T Consensus 60 ~Gadvn~~d~~g~TpL--------~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~L 131 (489)
T PHA02798 60 LGANVNGLDNEYSTPL--------CTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFM 131 (489)
T ss_pred CCCCCCCCCCCCCChH--------HHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHH
Confidence 4899999999999999 887753 6789999999999999999999999999998875 78899999
Q ss_pred HhcCCCcCcccCCCCcH-HHHHh--h---HHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 86 LESGAICSEHTFDGDRC-HYAAL--N---LKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 86 l~~ga~~~~~d~~g~~~-~~aa~--~---~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
+++|++++..|..|.|| |+++. + .+++++|+..|++++.. ....|.||+|.+..
T Consensus 132 l~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~-~~~~~~t~Lh~~~~ 191 (489)
T PHA02798 132 IENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTH-NNKEKYDTLHCYFK 191 (489)
T ss_pred HHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccc-cCcCCCcHHHHHHH
Confidence 99999999999999874 55555 4 78889999988877651 13467788886654
No 52
>PHA02946 ankyin-like protein; Provisional
Probab=99.36 E-value=4.8e-12 Score=136.10 Aligned_cols=118 Identities=17% Similarity=0.244 Sum_probs=104.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCC--HHHHHHHHHcCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGD--VDRLRYILESGVNVNA-RDQWDSVALYYACLAGHLDAARMLLESGA 90 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~--~~~~~~Ll~~g~~in~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 90 (608)
.|+++|.+|..|+||| |+|+..++ .++++.|+++|++++. .|..|.|||| ||..|+.+++++|+++|+
T Consensus 94 ~GAdin~~d~~g~TpL--------h~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~ga 164 (446)
T PHA02946 94 HGADPNACDKQHKTPL--------YYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGF 164 (446)
T ss_pred CcCCCCCCCCCCCCHH--------HHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccc
Confidence 4999999999999999 99987664 7999999999999995 6889999997 777899999999999999
Q ss_pred CcCcccCCCCcH-HHHHh----hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 91 ICSEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 91 ~~~~~d~~g~~~-~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
+++..|..|.|+ |.++. +.+++++|+.+|++++. ++..|.||||+|+..+
T Consensus 165 d~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~--~d~~G~TpLH~Aa~~~ 219 (446)
T PHA02946 165 EARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK--PDHDGNTPLHIVCSKT 219 (446)
T ss_pred cccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcC
Confidence 999999999985 55544 45789999999998876 7889999999999754
No 53
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.36 E-value=2.7e-12 Score=137.73 Aligned_cols=115 Identities=14% Similarity=0.109 Sum_probs=101.7
Q ss_pred CCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCC
Q 007317 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (608)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 99 (608)
..+..|+||| |+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|
T Consensus 97 ~~~~~g~tpL--------~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 168 (413)
T PHA02875 97 VFYKDGMTPL--------HLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG 168 (413)
T ss_pred cccCCCCCHH--------HHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCC
Confidence 3456788888 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccc-cccccccccccch
Q 007317 100 DRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGCGANRQ 144 (608)
Q Consensus 100 ~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g-~t~l~lac~~~~~ 144 (608)
.|| |+|+. +.+++++|+.+|+++.. ....| .||+|.|+..++.
T Consensus 169 ~TpL~~A~~~g~~eiv~~Ll~~ga~~n~--~~~~~~~t~l~~A~~~~~~ 215 (413)
T PHA02875 169 CTPLIIAMAKGDIAICKMLLDSGANIDY--FGKNGCVAALCYAIENNKI 215 (413)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCc--CCCCCCchHHHHHHHcCCH
Confidence 985 77776 88999999999998876 45555 5889988886654
No 54
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=99.35 E-value=4e-12 Score=114.19 Aligned_cols=133 Identities=20% Similarity=0.299 Sum_probs=107.1
Q ss_pred HHHhhcccccCCCCCCCCCCCCCeeEEecC---eeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHH
Q 007317 150 EVVLGISGVTSNGASNSDSFPPDVVFYVQG---RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLI 226 (608)
Q Consensus 150 ~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~---~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL 226 (608)
......++|+...+|+ |++|.++| +.+++||.||++||.+++ |..+-.+ ......+.++++++|...+
T Consensus 52 RLLaitadL~Ek~qfS------Dlk~K~~gns~k~i~AHKfVLAARsD~Wk--faN~~de-kse~~~~dDad~Ea~~t~i 122 (280)
T KOG4591|consen 52 RLLAITADLLEKEQFS------DLKFKFAGNSDKHIPAHKFVLAARSDFWK--FANGGDE-KSEELDLDDADFEAFHTAI 122 (280)
T ss_pred HHHHHHHHHhhccccc------ceeEEecCCccccCchhhhhhhhhcchhh--hccCCCc-chhhhcccccCHHHHHHhh
Confidence 3445556777777765 99999974 889999999999999875 3222112 2345567799999999999
Q ss_pred HHHhcCccccChh--hHHHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 227 HFFYSDRLEIAVD--DMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 227 ~ylYtg~~~i~~~--~~~~ll~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
+|+||++++...+ .+.+++++|..++++.|+..+. ||+.++++|+..+...|...|...|..+..
T Consensus 123 RWIYTDEidfk~dD~~L~el~e~An~FqLe~Lke~C~k~l~a~l~V~NCIk~Ye~AEe~n~~qL~n~~~eiIA~~W~ 199 (280)
T KOG4591|consen 123 RWIYTDEIDFKEDDEFLLELCELANRFQLELLKERCEKGLGALLHVDNCIKFYEFAEELNARQLMNVAAEIIAGAWD 199 (280)
T ss_pred eeeeccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHhhHHHHHHHHHHhhHHHHHHHHHHHHHhhcc
Confidence 9999999987665 4678899998888887777654 799999999999999999999999988775
No 55
>KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown]
Probab=99.34 E-value=8e-12 Score=126.89 Aligned_cols=133 Identities=19% Similarity=0.194 Sum_probs=110.9
Q ss_pred CCCCCCeeEEecC-----eeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhH
Q 007317 167 DSFPPDVVFYVQG-----RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDM 241 (608)
Q Consensus 167 ~~~~~Dv~~~v~~-----~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~ 241 (608)
|+.++|+.|+|++ ++||+||.+|+..|.+|.+||.+++.+....+|.+++|.|.+|..+|+|+|++++.+..+++
T Consensus 111 n~~~adv~fivg~~~~~~q~~paHk~vla~gS~VFdaMf~g~~a~~~s~ei~lpdvepaaFl~~L~flYsdev~~~~dtv 190 (521)
T KOG2075|consen 111 NELLADVHFIVGEEDGGSQRIPAHKLVLADGSDVFDAMFYGGLAEDASLEIRLPDVEPAAFLAFLRFLYSDEVKLAADTV 190 (521)
T ss_pred CcccceeEEEeccCCCcccccchhhhhhhcchHHHHHHhccCcccccCceeecCCcChhHhHHHHHHHhcchhhhhHHHH
Confidence 5667899999963 78999999999999999999999999887889999999999999999999999999999999
Q ss_pred HHHHHHHhHhc--------HHHHHHHHH--H-HHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCCCCCcc
Q 007317 242 EDLVKICKVCK--------CESLQRIIE--K-ELIHQKYAEYKALRDVDNSQKRFILQGSA--LPEEDRLP 299 (608)
Q Consensus 242 ~~ll~~A~~c~--------~~~L~~~l~--~-~l~~~~~A~~~~~~~L~~~~~~~i~~~~~--~~~~~~l~ 299 (608)
..++.+|+.+- ++++++.+. + ++.+.+-|..+..+.|...|.+-|..++. +.++.+-.
T Consensus 191 i~tl~~AkKY~VpaLer~CVkflr~~l~~~naf~~L~q~A~lf~ep~Li~~c~e~id~~~~~al~~EGf~d 261 (521)
T KOG2075|consen 191 ITTLYAAKKYLVPALERQCVKFLRKNLMADNAFLELFQRAKLFDEPSLISICLEVIDKSFEDALTPEGFCD 261 (521)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCHHHHHHHHHHhhhHHHhhhCccceee
Confidence 99999995443 555555443 2 45455558999999999999999988876 34444433
No 56
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.34 E-value=3.1e-12 Score=148.22 Aligned_cols=120 Identities=24% Similarity=0.228 Sum_probs=103.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|..|..|+||| |+|+..|+.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|++.++..+
T Consensus 547 ~G~d~n~~d~~G~TpL--------h~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~ 618 (823)
T PLN03192 547 AKLDPDIGDSKGRTPL--------HIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISD 618 (823)
T ss_pred CCCCCCCCCCCCCCHH--------HHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC
Confidence 4899999999999999 99999999999999999999999999999999999999999999999998776654
Q ss_pred cccCCCCcHHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDRCHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.. ..+..+|.|+. +.++++.|+++|++++. ++..|.||||+|+..++.
T Consensus 619 ~~-~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~--~d~~G~TpLh~A~~~g~~ 668 (823)
T PLN03192 619 PH-AAGDLLCTAAKRNDLTAMKELLKQGLNVDS--EDHQGATALQVAMAEDHV 668 (823)
T ss_pred cc-cCchHHHHHHHhCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHCCcH
Confidence 32 22234677777 88999999999998876 788999999999986653
No 57
>PHA02741 hypothetical protein; Provisional
Probab=99.33 E-value=4.8e-12 Score=117.97 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCC----HHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHh-c
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGVNVNARDQ-WDSVALYYACLAGHLDAARMLLE-S 88 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~----~~~~~~Ll~~g~~in~~d~-~g~tpLh~A~~~g~~~~v~~Ll~-~ 88 (608)
|++++.+|..|+||| |+|+..|+ .+++++|++.|+++|.++. .|+||||+|+..++.+++++|+. .
T Consensus 50 ga~in~~d~~g~T~L--------h~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~ 121 (169)
T PHA02741 50 AAALNATDDAGQMCI--------HIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQP 121 (169)
T ss_pred hhhhhccCCCCCcHH--------HHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 688999999999999 99999999 5889999999999999985 89999999999999999999997 5
Q ss_pred CCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCC
Q 007317 89 GAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARP 122 (608)
Q Consensus 89 ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~ 122 (608)
|++++..|..|.|| +.++. +.+++++|+..+...
T Consensus 122 g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 122 GIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 99999999999986 55555 788999999876553
No 58
>PHA02798 ankyrin-like protein; Provisional
Probab=99.31 E-value=5.9e-12 Score=137.88 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=99.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-----CCHHHHHHHHhc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLA-----GHLDAARMLLES 88 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~-----g~~~~v~~Ll~~ 88 (608)
++.+++.. ..|.|++ ..+.+...++.++++.|+++|+++|.+|..|.||||+|+.. ++.+++++|+++
T Consensus 26 ~~~~~~~~-~~~~~~~------~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~ 98 (489)
T PHA02798 26 KSCNPNEI-VNEYSIF------QKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIEN 98 (489)
T ss_pred hcCChhhh-cccchHH------HHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHC
Confidence 44455544 3466766 11334556789999999999999999999999999998764 679999999999
Q ss_pred CCCcCcccCCCCcH-HHHHh-----hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 89 GAICSEHTFDGDRC-HYAAL-----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 89 ga~~~~~d~~g~~~-~~aa~-----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
|++++..|..|.|| |+++. +.+++++|+.+|++++. .+..|.||||+|+..+.
T Consensus 99 GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~--~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 99 GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTL--LDKDGFTMLQVYLQSNH 157 (489)
T ss_pred CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc--cCCCCCcHHHHHHHcCC
Confidence 99999999999985 66665 57899999999998876 78899999999998765
No 59
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.31 E-value=6.5e-12 Score=143.29 Aligned_cols=117 Identities=26% Similarity=0.250 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhc-CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRA-GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~-g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|++++.+|..|+||| |+|+.. ++.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 331 gadin~~d~~g~TpL--------h~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~ 402 (682)
T PHA02876 331 GADVNAADRLYITPL--------HQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE 402 (682)
T ss_pred CCCCCCcccCCCcHH--------HHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 444444444444444 666653 35666666667777777777777777777777777777777777777777
Q ss_pred cccCCCCc-HHHHHh---hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~---~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
..+..|.| +|+++. ...++++|+.+|++++. ++..|.||||+|+..
T Consensus 403 ~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~--~d~~G~TpLh~Aa~~ 452 (682)
T PHA02876 403 ALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNS--KNKDLSTPLHYACKK 452 (682)
T ss_pred ccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCc--CCCCCChHHHHHHHh
Confidence 77776665 455554 34456777777766655 666777777777753
No 60
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.31 E-value=2e-11 Score=100.70 Aligned_cols=84 Identities=35% Similarity=0.546 Sum_probs=75.7
Q ss_pred hhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHH
Q 007317 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (608)
Q Consensus 37 l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~ 113 (608)
||+|+..|+++++++|++.+++++. |.||||+|+..|+.+++++|+++|++++..|..|.| +|+++. +.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 5999999999999999999988887 889999999999999999999999999999999998 577777 899999
Q ss_pred HHHhhcCCCCC
Q 007317 114 LLKAYEARPPP 124 (608)
Q Consensus 114 ~L~~~~~~~~~ 124 (608)
+|+++|++++.
T Consensus 77 ~Ll~~g~~~~~ 87 (89)
T PF12796_consen 77 LLLEHGADVNI 87 (89)
T ss_dssp HHHHTTT-TTS
T ss_pred HHHHcCCCCCC
Confidence 99999887654
No 61
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.30 E-value=8.6e-12 Score=142.29 Aligned_cols=117 Identities=20% Similarity=0.218 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-LDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~ga~~ 92 (608)
.|+++|.+|..|+||| |+|+..|+.++++.|+++|++++..+..|.||||+|+..++ ..++++|+++|+++
T Consensus 364 ~gadin~~d~~G~TpL--------h~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadi 435 (682)
T PHA02876 364 LGANVNARDYCDKTPI--------HYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANV 435 (682)
T ss_pred cCCCCccCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 4999999999999999 99999999999999999999999999999999999988665 56799999999999
Q ss_pred CcccCCCCcH-HHHHh---hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 93 SEHTFDGDRC-HYAAL---NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 93 ~~~d~~g~~~-~~aa~---~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
+.+|..|.|| |+|+. +.+++++|+.+|++++. .+..|.||+++|+.
T Consensus 436 n~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~--~d~~g~tpl~~a~~ 485 (682)
T PHA02876 436 NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNA--INIQNQYPLLIALE 485 (682)
T ss_pred CcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHH
Confidence 9999999984 77766 46899999999998877 78899999999876
No 62
>PHA02917 ankyrin-like protein; Provisional
Probab=99.29 E-value=1.3e-11 Score=138.05 Aligned_cols=130 Identities=13% Similarity=0.083 Sum_probs=105.9
Q ss_pred CCCCCCCCCCCCCCCCCC---CC------------------------chhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCC
Q 007317 14 DEIDLDASDFSSSVPLKK---VP------------------------NGDVFEASRAGDVDRLRYILESGVNVNARDQWD 66 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~---~~------------------------~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g 66 (608)
.|++++.++..|+|||+- +. ...+|.|+..|+.+++++|+++|+++|.+|..|
T Consensus 57 ~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g 136 (661)
T PHA02917 57 SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENH 136 (661)
T ss_pred CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCC
Confidence 599999999999999961 00 022346777889999999999999999999999
Q ss_pred CcHHHHHH--HcCCHHHHHHHHhcCCCcCcccC---CC-----------Cc-HHHHHh-------------hHHHHHHHH
Q 007317 67 SVALYYAC--LAGHLDAARMLLESGAICSEHTF---DG-----------DR-CHYAAL-------------NLKVRKLLK 116 (608)
Q Consensus 67 ~tpLh~A~--~~g~~~~v~~Ll~~ga~~~~~d~---~g-----------~~-~~~aa~-------------~~~~~~~L~ 116 (608)
+||||.|+ ..|+.+++++|+++|++++..|. .| .| +|+++. +.+++++|+
T Consensus 137 ~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li 216 (661)
T PHA02917 137 RSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLI 216 (661)
T ss_pred ccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHH
Confidence 99999653 57899999999999999986543 22 35 677764 568999999
Q ss_pred hhcCCCCCCCCcccccccccccccccchh
Q 007317 117 AYEARPPPLGPLQAALRDTFLGCGANRQF 145 (608)
Q Consensus 117 ~~~~~~~~~~~~~~g~t~l~lac~~~~~~ 145 (608)
.+|++++. .+..|.||||+|+..++..
T Consensus 217 ~~Gadvn~--~d~~G~TpLh~A~~~g~~~ 243 (661)
T PHA02917 217 NHGIKPSS--IDKNYCTALQYYIKSSHID 243 (661)
T ss_pred HCCCCccc--CCCCCCcHHHHHHHcCCCc
Confidence 99998876 7889999999999877643
No 63
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.27 E-value=5.4e-12 Score=127.35 Aligned_cols=117 Identities=22% Similarity=0.307 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
.|.-+..|-+|| --|+..||+++++.|+.+|+++|.......|||..||.-|+.++++||+++|+|+++.|+
T Consensus 77 FDge~IegappL--------WaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~Ianr 148 (615)
T KOG0508|consen 77 FDGETIEGAPPL--------WAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANR 148 (615)
T ss_pred eCCcccCCCchh--------hHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCccccc
Confidence 444566788998 777889999999999999999999998889999999999999999999999999999999
Q ss_pred CCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 98 DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 98 ~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|.| ++.+|. +.++.++|++.|++++. +...|.|+||.+.+++..
T Consensus 149 hGhTcLmIa~ykGh~~I~qyLle~gADvn~--ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 149 HGHTCLMIACYKGHVDIAQYLLEQGADVNA--KSYKGNTALHDCAESGSV 196 (615)
T ss_pred CCCeeEEeeeccCchHHHHHHHHhCCCcch--hcccCchHHHhhhhcccH
Confidence 9999 566666 99999999999999877 788999999998876553
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.26 E-value=1.4e-11 Score=113.05 Aligned_cols=84 Identities=18% Similarity=0.260 Sum_probs=39.5
Q ss_pred hHhhhcCCH---HHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHh-cCCCcCcccCCCCcH-HHHHh--hH
Q 007317 38 FEASRAGDV---DRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLE-SGAICSEHTFDGDRC-HYAAL--NL 109 (608)
Q Consensus 38 ~~A~~~g~~---~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~~~-~~aa~--~~ 109 (608)
|+|+..|+. ++++.|++.|+++|.++ ..|+||||+|+..|+.+++++|+. .|++++..|..|.|| |+++. +.
T Consensus 60 h~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~ 139 (154)
T PHA02736 60 HIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDA 139 (154)
T ss_pred EeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCH
Confidence 555544443 23444445555555544 245555555555555555555554 245555555555442 33333 44
Q ss_pred HHHHHHHhhcCC
Q 007317 110 KVRKLLKAYEAR 121 (608)
Q Consensus 110 ~~~~~L~~~~~~ 121 (608)
+++++|+.+|++
T Consensus 140 ~i~~~Ll~~ga~ 151 (154)
T PHA02736 140 KMMNILRAKGAQ 151 (154)
T ss_pred HHHHHHHHcCCC
Confidence 444555444443
No 65
>PHA02795 ankyrin-like protein; Provisional
Probab=99.26 E-value=1.7e-11 Score=128.10 Aligned_cols=117 Identities=8% Similarity=-0.015 Sum_probs=91.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC------CCCCcHHHHHHHcCCHHHHHHHHh
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD------QWDSVALYYACLAGHLDAARMLLE 87 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d------~~g~tpLh~A~~~g~~~~v~~Ll~ 87 (608)
.|+|++.+ ++.||| |+|+..|+.+++++|+++|++.+... ..|.|++|.|+..++.+++++|++
T Consensus 140 ~GADIn~~--~~~t~l--------h~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs 209 (437)
T PHA02795 140 HGAVIYKI--ECLNAY--------FRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIP 209 (437)
T ss_pred CCCCCCCC--CCCCHH--------HHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHh
Confidence 48888874 357788 88888888888888888887432221 347788888888888888888888
Q ss_pred cCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 88 SGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 88 ~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
+|++++..|..|.| +|+|+. +.+++++|+.+|++++. .+..|.||||.|+..+
T Consensus 210 ~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~--~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 210 YIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA--VMSNGYTCLDVAVDRG 265 (437)
T ss_pred CcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcC
Confidence 88888888888887 466666 78888888888888776 6778888888888755
No 66
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.25 E-value=2.2e-11 Score=133.48 Aligned_cols=123 Identities=17% Similarity=0.175 Sum_probs=100.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCCC-CCCCCCCCcHHHHHHHc--CCHHHHHHHHh
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNV-NARDQWDSVALYYACLA--GHLDAARMLLE 87 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~i-n~~d~~g~tpLh~A~~~--g~~~~v~~Ll~ 87 (608)
.|+++|.+|..|+||| |.|+.. |+.+++++|+++|+++ +.+|..|+||||+|+.. ++.+++++|++
T Consensus 97 ~Gadin~~d~~g~tpL--------~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~ 168 (494)
T PHA02989 97 FGADINLKTFNGVSPI--------VCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS 168 (494)
T ss_pred CCCCCCCCCCCCCcHH--------HHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence 4999999999999999 876644 7899999999999999 89999999999998754 68999999999
Q ss_pred cCCCcCc-ccCCCCcH-HHHHh------hHHHHHHHHhhcCCCCC-----------------------------------
Q 007317 88 SGAICSE-HTFDGDRC-HYAAL------NLKVRKLLKAYEARPPP----------------------------------- 124 (608)
Q Consensus 88 ~ga~~~~-~d~~g~~~-~~aa~------~~~~~~~L~~~~~~~~~----------------------------------- 124 (608)
+|++++. .+..|.|| |.++. +.+++++|+..|++.+.
T Consensus 169 ~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~ad 248 (494)
T PHA02989 169 FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIK 248 (494)
T ss_pred cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCC
Confidence 9999987 57788875 54433 56888999988876432
Q ss_pred -CCCcccccccccccccccch
Q 007317 125 -LGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 125 -~~~~~~g~t~l~lac~~~~~ 144 (608)
+.++..|.||||+|+..+..
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~ 269 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNY 269 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCH
Confidence 22445699999999976653
No 67
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.25 E-value=1.4e-11 Score=132.17 Aligned_cols=119 Identities=21% Similarity=0.259 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-cC-CCcCcc
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE-SG-AICSEH 95 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~g-a~~~~~ 95 (608)
+|-.|.+|.||| |+||+.|+++.+..|+..|++++.+++++.||||.||++|...+++.|++ .| ...+..
T Consensus 266 v~~~d~dg~tpL--------H~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~ 337 (929)
T KOG0510|consen 266 VNDEDNDGCTPL--------HYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNES 337 (929)
T ss_pred hhcccccCCchH--------HHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccc
Confidence 667789999999 99999999999999999999999999999999999999999999999998 54 667788
Q ss_pred cCCCCcH-HHHHh--hHHHHHHHHhhcCCCC-CCCCcccccccccccccccch
Q 007317 96 TFDGDRC-HYAAL--NLKVRKLLKAYEARPP-PLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 96 d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~-~~~~~~~g~t~l~lac~~~~~ 144 (608)
|..|.|| |.++. |..++++|++.|+... ....+.+|.||||+|...++.
T Consensus 338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~ 390 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNT 390 (929)
T ss_pred cccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccH
Confidence 8999984 66666 8999999999998754 212488999999999986664
No 68
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.22 E-value=2.9e-11 Score=95.42 Aligned_cols=101 Identities=21% Similarity=0.147 Sum_probs=89.7
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcHHHHHh---hHHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL---NLKV 111 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~~~aa~---~~~~ 111 (608)
+.+.|+.++|.++.++..+..|-|+|..- .|++|||+|+-+|+.+++.+|+.-|++++.+|+.|.||...+. |..+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 45689999999999999999998888776 8999999999999999999999999999999999999766555 9999
Q ss_pred HHHHHhhcCCCCCCCCccccccccccc
Q 007317 112 RKLLKAYEARPPPLGPLQAALRDTFLG 138 (608)
Q Consensus 112 ~~~L~~~~~~~~~~~~~~~g~t~l~la 138 (608)
+++|+..|++... ..+.|.+.+..+
T Consensus 83 VklLL~~GAdrt~--~~PdG~~~~eat 107 (117)
T KOG4214|consen 83 VKLLLQNGADRTI--HAPDGTALIEAT 107 (117)
T ss_pred HHHHHHcCcccce--eCCCchhHHhhc
Confidence 9999999999887 677787666543
No 69
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.22 E-value=5.1e-11 Score=119.70 Aligned_cols=95 Identities=24% Similarity=0.251 Sum_probs=83.1
Q ss_pred CCCCCCCC----CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007317 14 DEIDLDAS----DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLLES 88 (608)
Q Consensus 14 ~~~~l~~~----d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ 88 (608)
.|+++|.+ +..|.||| |+|+..|+.++++.|+++|+++|.+ +..|.||||+|+..|+.+++++|+.+
T Consensus 55 ~GAdiN~~~~~sd~~g~TpL--------h~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~ 126 (300)
T PHA02884 55 LGADPEAPFPLSENSKTNPL--------IYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSY 126 (300)
T ss_pred CCCCccccCcccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 49999987 46899999 9999999999999999999999997 46899999999999999999999999
Q ss_pred CCCcCcccCCCCcH-HHHHh--hHHHHHHHH
Q 007317 89 GAICSEHTFDGDRC-HYAAL--NLKVRKLLK 116 (608)
Q Consensus 89 ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~ 116 (608)
|++++..|..|.|| +.|+. +..+..++.
T Consensus 127 GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 127 GADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred CCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 99999999999985 55554 455554443
No 70
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.21 E-value=2.1e-11 Score=138.67 Aligned_cols=116 Identities=31% Similarity=0.392 Sum_probs=94.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.++..|.||| |.||..|+++++++|+++|++++.+++.|+||||.||..|+.+|+.+|+++|+++|
T Consensus 529 ~ga~v~~~~~r~~TpL--------h~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn 600 (1143)
T KOG4177|consen 529 HGANVDLRTGRGYTPL--------HVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVN 600 (1143)
T ss_pred cCCceehhcccccchH--------HHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCC
Confidence 4888899999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCC---CCCcccccccccc
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPP---LGPLQAALRDTFL 137 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~---~~~~~~g~t~l~l 137 (608)
..|.+|.|| +.++. +..+.+.|+..+..+.. ......|.+|.-+
T Consensus 601 a~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v 650 (1143)
T KOG4177|consen 601 AADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDV 650 (1143)
T ss_pred cccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhH
Confidence 999999984 66655 77888888887766211 1133445566544
No 71
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.20 E-value=1.5e-11 Score=112.91 Aligned_cols=115 Identities=16% Similarity=0.103 Sum_probs=91.1
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCC-------CCCCCCCCCCcHHHHHHHcCCHH---HHHHHH
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-------NVNARDQWDSVALYYACLAGHLD---AARMLL 86 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~-------~in~~d~~g~tpLh~A~~~g~~~---~v~~Ll 86 (608)
..+.+|..|.||| |+|+..|+.. ..+...+. .++.+|..|+||||+|+..|+.+ ++++|+
T Consensus 9 ~~~~~d~~g~tpL--------h~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll 78 (154)
T PHA02736 9 FASEPDIEGENIL--------HYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLM 78 (154)
T ss_pred HHHhcCCCCCCHH--------HHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHH
Confidence 4566788999999 9999999943 33322221 23456889999999999999874 688999
Q ss_pred hcCCCcCcccC-CCCc-HHHHHh--hHHHHHHHHh-hcCCCCCCCCcccccccccccccccc
Q 007317 87 ESGAICSEHTF-DGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 87 ~~ga~~~~~d~-~g~~-~~~aa~--~~~~~~~L~~-~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
++|++++.++. .|.| +|+++. +.+++++|+. .+.+++. .+..|.||||+|+..+.
T Consensus 79 ~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~--~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 79 EWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI--LNYAFKTPYYVACERHD 138 (154)
T ss_pred HcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc--ccCCCCCHHHHHHHcCC
Confidence 99999999984 8988 577777 8899999987 4777665 78899999999997554
No 72
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.20 E-value=3.8e-11 Score=99.08 Aligned_cols=70 Identities=29% Similarity=0.520 Sum_probs=62.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
+.+++. |.||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 20 ~~~~~~----~~~~l--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 20 GADINL----GNTAL--------HYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNI 87 (89)
T ss_dssp TSTTTS----SSBHH--------HHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTS
T ss_pred cCCCCC----CCCHH--------HHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 555554 88999 999999999999999999999999999999999999999999999999999999987
Q ss_pred cc
Q 007317 95 HT 96 (608)
Q Consensus 95 ~d 96 (608)
+|
T Consensus 88 ~n 89 (89)
T PF12796_consen 88 RN 89 (89)
T ss_dssp S-
T ss_pred cC
Confidence 65
No 73
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.20 E-value=5.7e-11 Score=130.31 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhh------cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CCHHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASR------AGDVDRLRYILESGVNVNARDQWDSVALYYACLA---GHLDAARM 84 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~------~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~---g~~~~v~~ 84 (608)
.|+++|.++ .|.||| |.|+. .|+.++++.|+++|+++|.+|..|+||||.|+.. |+.+++++
T Consensus 59 ~GAdvn~~~-~~~tpL--------~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~ 129 (494)
T PHA02989 59 NGADVNYKG-YIETPL--------CAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRF 129 (494)
T ss_pred cCCCccCCC-CCCCcH--------HHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHH
Confidence 499999987 679999 88764 5889999999999999999999999999988765 68999999
Q ss_pred HHhcCCCc-CcccCCCCcH-HHHHh----hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 85 LLESGAIC-SEHTFDGDRC-HYAAL----NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 85 Ll~~ga~~-~~~d~~g~~~-~~aa~----~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
|+++|+++ +..|..|.|| |+++. +.+++++|+.+|+++... ....|.||+|.++..
T Consensus 130 Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~-~~~~g~tpL~~a~~~ 191 (494)
T PHA02989 130 LLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK-TSLYGLTPMNIYLRN 191 (494)
T ss_pred HHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-ccccCCChHHHHHhc
Confidence 99999999 8999999985 55543 678999999999887541 356799999987654
No 74
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.20 E-value=3.5e-11 Score=136.79 Aligned_cols=127 Identities=22% Similarity=0.180 Sum_probs=107.8
Q ss_pred CCCCCCCCCCCCCCCCC-------------------------CCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcH
Q 007317 15 EIDLDASDFSSSVPLKK-------------------------VPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVA 69 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~-------------------------~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tp 69 (608)
|+++|....+|+|||+- +.-..+|.|...++..+++.++++|++++.++..|.||
T Consensus 464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~Tp 543 (1143)
T KOG4177|consen 464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTP 543 (1143)
T ss_pred CCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccch
Confidence 77777777777777741 12233577777777777777778888999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 70 LYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 70 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
||.||.+|+.++|++|+++|++++.+++.|.| +|.+|. +.+++.+|+++|+.++. .+.+|.|||+.|...+.
T Consensus 544 Lh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna--~d~~g~TpL~iA~~lg~ 618 (1143)
T KOG4177|consen 544 LHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA--ADLDGFTPLHIAVRLGY 618 (1143)
T ss_pred HHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc--ccccCcchhHHHHHhcc
Confidence 99999999999999999999999999999998 588888 89999999999999887 78899999999887655
No 75
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.20 E-value=2.2e-11 Score=90.16 Aligned_cols=54 Identities=33% Similarity=0.620 Sum_probs=46.0
Q ss_pred CCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007317 25 SSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (608)
Q Consensus 25 g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll 86 (608)
|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+
T Consensus 1 g~t~l--------h~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPL--------HWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHH--------HHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHH--------HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 67888 9999999999999999999999999999999999999999999999986
No 76
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.19 E-value=3.5e-11 Score=118.01 Aligned_cols=121 Identities=21% Similarity=0.212 Sum_probs=98.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcC-CCCCCCCCCCCcH-------------------------
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQWDSVA------------------------- 69 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g-~~in~~d~~g~tp------------------------- 69 (608)
.-+|.-|.+|.|+| |||+..+|+++++.||..| ++++.++.-|+||
T Consensus 259 yvVNlaDsNGNTAL--------HYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg 330 (452)
T KOG0514|consen 259 YVVNLADSNGNTAL--------HYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG 330 (452)
T ss_pred HHhhhhcCCCCeee--------eeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc
Confidence 34788899999999 9999999999999999866 5677666655554
Q ss_pred -------------HHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhh-cCCCCCCCCccccc
Q 007317 70 -------------LYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAY-EARPPPLGPLQAAL 132 (608)
Q Consensus 70 -------------Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~-~~~~~~~~~~~~g~ 132 (608)
|++|+.+|..++++.||..|||+|++|.+|.| ++.+|. |.+++++|+.. +++... .+.+|.
T Consensus 331 nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL--tD~DgS 408 (452)
T KOG0514|consen 331 DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL--TDVDGS 408 (452)
T ss_pred CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee--ecCCCc
Confidence 55577889999999999999999999999998 677777 88999888864 556666 678899
Q ss_pred ccccccccccchhh
Q 007317 133 RDTFLGCGANRQFL 146 (608)
Q Consensus 133 t~l~lac~~~~~~l 146 (608)
|+|-.|-++++...
T Consensus 409 TAl~IAleagh~eI 422 (452)
T KOG0514|consen 409 TALSIALEAGHREI 422 (452)
T ss_pred hhhhhHHhcCchHH
Confidence 99988877766543
No 77
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.19 E-value=5.5e-11 Score=108.87 Aligned_cols=119 Identities=18% Similarity=0.130 Sum_probs=103.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|...|..+--+|+|+ .+++...+++....+. ..-+|..|+.|.|||.||+..|+++++++|++.|++++
T Consensus 118 N~~rgnevs~~p~s~~--------slsVhql~L~~~~~~~--~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~ 187 (296)
T KOG0502|consen 118 NGARGNEVSLMPWSPL--------SLSVHQLHLDVVDLLV--NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPD 187 (296)
T ss_pred ccccCCccccccCChh--------hHHHHHHHHHHHHHHh--hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChh
Confidence 3788888999999999 9999888887765443 34589999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+.-+...+ +..++. ..+++++|+..+.+.+. ++.+|.|||.+|+..++.
T Consensus 188 ~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv--yDwNGgTpLlyAvrgnhv 239 (296)
T KOG0502|consen 188 ALGKYRESALSLATRGGYTDIVELLLTREVDVNV--YDWNGGTPLLYAVRGNHV 239 (296)
T ss_pred hhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce--eccCCCceeeeeecCChH
Confidence 88777766 566666 88999999999988877 899999999999987664
No 78
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.18 E-value=6.8e-11 Score=121.94 Aligned_cols=132 Identities=20% Similarity=0.150 Sum_probs=110.3
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|+++|..+.+|.|+| |.||...+.+++++|+++|++||.+|..||||||.|+.+|+..++++|+.+|++...
T Consensus 63 ga~~~~~n~DglTal--------hq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~a 134 (527)
T KOG0505|consen 63 GASPNLCNVDGLTAL--------HQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLA 134 (527)
T ss_pred CCCccccCCccchhH--------HHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhh
Confidence 778899999999999 999999999999999999999999999999999999999999999999999988665
Q ss_pred ccCC-----------------------------------------------------------CCc-HHHHHh--hHHHH
Q 007317 95 HTFD-----------------------------------------------------------GDR-CHYAAL--NLKVR 112 (608)
Q Consensus 95 ~d~~-----------------------------------------------------------g~~-~~~aa~--~~~~~ 112 (608)
.+.+ |.| +|.++. ..++.
T Consensus 135 vNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~ 214 (527)
T KOG0505|consen 135 VNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVA 214 (527)
T ss_pred ccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHH
Confidence 5433 345 566655 77888
Q ss_pred HHHHhhcCCCCCCCCcccccccccccccccchhhHHHHHHhhccc
Q 007317 113 KLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEEAEVVLGISG 157 (608)
Q Consensus 113 ~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~l~~~~~~~~~~~ 157 (608)
++|+.+|..+.. .+.+|+||||.|..-......+ -+..|...
T Consensus 215 ~lLl~ag~~~~~--~D~dgWtPlHAAA~Wg~~~~~e-lL~~~ga~ 256 (527)
T KOG0505|consen 215 ALLLQAGYSVNI--KDYDGWTPLHAAAHWGQEDACE-LLVEHGAD 256 (527)
T ss_pred HHHHHhccCccc--ccccCCCcccHHHHhhhHhHHH-HHHHhhcc
Confidence 999999988877 8899999999988766654444 33334443
No 79
>PHA02730 ankyrin-like protein; Provisional
Probab=99.14 E-value=1.3e-10 Score=127.28 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=98.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCC----HHHHHHHHHcCC--CCCCCCCCCCcHHHH---HHHcC-------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGV--NVNARDQWDSVALYY---ACLAG------- 77 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~----~~~~~~Ll~~g~--~in~~d~~g~tpLh~---A~~~g------- 77 (608)
.|+++|.. ..|+||| |+|+..++ .++++.|+++|+ ++|.+|..|.||||. |...+
T Consensus 368 ~GAdIN~k-~~G~TpL--------H~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e 438 (672)
T PHA02730 368 NGATMDKT-TDNNYPL--------HDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYE 438 (672)
T ss_pred CCCCCCcC-CCCCcHH--------HHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccc
Confidence 49999986 7999999 99988875 899999999997 699999999999984 33332
Q ss_pred --CHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcc-ccccccccccc
Q 007317 78 --HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCG 140 (608)
Q Consensus 78 --~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~-~g~t~l~lac~ 140 (608)
..+++++|+.+|++++..|..|.| +|+|+. +.+++++|+.+|++++. .+. .|.||+|.|+.
T Consensus 439 ~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~--~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 439 TILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT--TSRSIINTAIQKSSY 505 (672)
T ss_pred hhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC--CCCcCCcCHHHHHHH
Confidence 235799999999999999999998 577776 78899999999998876 554 58999999864
No 80
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.14 E-value=9.6e-11 Score=125.82 Aligned_cols=132 Identities=19% Similarity=0.174 Sum_probs=112.8
Q ss_pred cchhhhhhC--CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 007317 5 RQSTIDAEL--DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAA 82 (608)
Q Consensus 5 ~~~~~~~~~--~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v 82 (608)
+||-+++-+ .|++.+..+.++.+|+ |+|+..|+.+.++.|+++|+|+|..|+.|.||||+||..++.+..
T Consensus 99 ~~~~~i~~Lls~gad~~~~n~~~~apl--------h~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~ 170 (929)
T KOG0510|consen 99 NQGDKIQVLLSYGADTPLRNLNKNAPL--------HLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAK 170 (929)
T ss_pred chHHHHHHHHhcCCCCChhhhhccCch--------hhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHH
Confidence 466555555 3999999999999999 999999999999999999999999999999999999999999988
Q ss_pred HHHHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHHh-hcCC--CCCCCCcccccccccccccccch
Q 007317 83 RMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKA-YEAR--PPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 83 ~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~-~~~~--~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+.|++.|+++-..|.+|..+ |.++. ..+..++++. +|.. ..++-.+..+.||||+|++.++.
T Consensus 171 k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~ 238 (929)
T KOG0510|consen 171 KELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDI 238 (929)
T ss_pred HHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCH
Confidence 99999999999999999975 88888 6777777776 3322 23333567889999999998885
No 81
>PHA02795 ankyrin-like protein; Provisional
Probab=99.13 E-value=1.3e-10 Score=121.49 Aligned_cols=119 Identities=11% Similarity=-0.005 Sum_probs=98.4
Q ss_pred CCCCCC------CCCCCCCCCCCCCCchhhhHhhh--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 007317 14 DEIDLD------ASDFSSSVPLKKVPNGDVFEASR--AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (608)
Q Consensus 14 ~~~~l~------~~d~~g~tpL~~~~~~~l~~A~~--~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~L 85 (608)
.|+++| .++.+++|+| |.|+. .|+.+++++|+.+|++++..+ +.||+|+|+..|+.+++++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~L--------~~~~~n~~n~~eiV~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~L 168 (437)
T PHA02795 99 KNYMEDIFSIIIKNCNSVQDLL--------LYYLSNAYVEIDIVDFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFI 168 (437)
T ss_pred cccccchhhhhhhccccccHHH--------HHHHHhcCCCHHHHHHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHH
Confidence 477777 7888899999 99998 999999999999999999854 58999999999999999999
Q ss_pred HhcCCCcCccc------CCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 86 LESGAICSEHT------FDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 86 l~~ga~~~~~d------~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+++|++..-.. ..+.++ |.++. +.+++++|+.+|++.+. ++..|.||||.|+..++.
T Consensus 169 ls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~--kD~~G~TpLh~Aa~~g~~ 234 (437)
T PHA02795 169 LNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ--LDAGGRTLLYRAIYAGYI 234 (437)
T ss_pred HhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc--CCCCCCCHHHHHHHcCCH
Confidence 99998543221 224454 44444 68999999999998876 789999999999987664
No 82
>PHA02730 ankyrin-like protein; Provisional
Probab=99.12 E-value=2e-10 Score=125.79 Aligned_cols=120 Identities=18% Similarity=0.149 Sum_probs=94.6
Q ss_pred CCC-CCCCCCCCCCCCCCchhhhHhhhcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHhcCC
Q 007317 17 DLD-ASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNARDQWDSVALYYACLAG--HLDAARMLLESGA 90 (608)
Q Consensus 17 ~l~-~~d~~g~tpL~~~~~~~l~~A~~~g---~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~ga 90 (608)
++| .+|..|+||| |+|+..| +.++++.|+++|++++.+|..|+||||+|+..| +.+++++|+++|+
T Consensus 32 ~in~~kd~~G~TaL--------h~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~ 103 (672)
T PHA02730 32 NLSKHIDRRGNNAL--------HCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYS 103 (672)
T ss_pred chhhhcCCCCCcHH--------HHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCC
Confidence 566 7889999999 9999987 599999999999999999999999999999966 7999999999965
Q ss_pred C--cCcccCCCCc--HHHHHh---hHHHHHHHHh-hcCCCCCCC--Cc-ccccccccccccccch
Q 007317 91 I--CSEHTFDGDR--CHYAAL---NLKVRKLLKA-YEARPPPLG--PL-QAALRDTFLGCGANRQ 144 (608)
Q Consensus 91 ~--~~~~d~~g~~--~~~aa~---~~~~~~~L~~-~~~~~~~~~--~~-~~g~t~l~lac~~~~~ 144 (608)
+ ++..+..+.+ ..+.+. +.+++++|+. .+.+++... .. -.|.+|++++.....+
T Consensus 104 ~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~ 168 (672)
T PHA02730 104 NASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRP 168 (672)
T ss_pred CCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCch
Confidence 4 4666654554 333332 7789999996 556665521 11 2688999998875554
No 83
>PHA02917 ankyrin-like protein; Provisional
Probab=99.11 E-value=3.2e-10 Score=127.00 Aligned_cols=114 Identities=16% Similarity=0.083 Sum_probs=93.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH----HHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLD----AARMLL 86 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~----~v~~Ll 86 (608)
+|.+++.+|.+|+||| |+|+.. |+.++++.|+++|++++.++..|+||||+|+..|+.+ +++.|+
T Consensus 21 ~~~~~~~~d~~g~t~L--------h~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll 92 (661)
T PHA02917 21 DRDPNDTRNQFKNNAL--------HAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALL 92 (661)
T ss_pred ccCcccccCCCCCcHH--------HHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHH
Confidence 7888899999999999 997555 8899999999999999999999999999999999854 567888
Q ss_pred hcCCCcCcccCCCCcHHHHH-h--hHHHHHHHHhhcCCCCCCCCcccccccccccc
Q 007317 87 ESGAICSEHTFDGDRCHYAA-L--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGC 139 (608)
Q Consensus 87 ~~ga~~~~~d~~g~~~~~aa-~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac 139 (608)
+.+...+..+. .++++++ . +.+++++|+.+|++++. ++..|.||||.++
T Consensus 93 ~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~--~d~~g~T~L~~~~ 144 (661)
T PHA02917 93 EATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDLSV--KCENHRSVIENYV 144 (661)
T ss_pred hccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCCCc--cCCCCccHHHHHH
Confidence 76544454332 2444444 4 78999999999999887 7888999998654
No 84
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.10 E-value=6.2e-10 Score=97.16 Aligned_cols=113 Identities=32% Similarity=0.396 Sum_probs=99.4
Q ss_pred CCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCC
Q 007317 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (608)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 99 (608)
.+|..|+||| |+|+..|+.++++.|++.|++.+..+..|.||+|+|+..+..+++++|+..|++++..+..|
T Consensus 2 ~~~~~g~t~l--------~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 73 (126)
T cd00204 2 ARDEDGRTPL--------HLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDG 73 (126)
T ss_pred CcCcCCCCHH--------HHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 3567899999 99999999999999999999999999999999999999999999999999999999888888
Q ss_pred CcH-HHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 100 DRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 100 ~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
.++ |.++. +.+++++|+..+..... .+..|.||++.|...+
T Consensus 74 ~~~l~~a~~~~~~~~~~~L~~~~~~~~~--~~~~~~~~l~~~~~~~ 117 (126)
T cd00204 74 NTPLHLAARNGNLDVVKLLLKHGADVNA--RDKDGRTPLHLAAKNG 117 (126)
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHhcC
Confidence 885 65655 78999999998866655 5678889999877643
No 85
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.08 E-value=2.3e-10 Score=112.37 Aligned_cols=84 Identities=29% Similarity=0.348 Sum_probs=75.1
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCcCcccCCCCcHHHHHh---hHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE-SGAICSEHTFDGDRCHYAAL---NLK 110 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~~~~~aa~---~~~ 110 (608)
+.|++|+..|+.++++.||.+|+|+|.+|..|.|+|+.||.+||.++++.||. .++++...|.+|.|++-.|+ |.+
T Consensus 342 TALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 342 TALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHRE 421 (452)
T ss_pred hhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchH
Confidence 34599999999999999999999999999999999999999999999999997 58999999999999766666 788
Q ss_pred HHHHHHhh
Q 007317 111 VRKLLKAY 118 (608)
Q Consensus 111 ~~~~L~~~ 118 (608)
+.-+|..+
T Consensus 422 Ia~mlYa~ 429 (452)
T KOG0514|consen 422 IAVMLYAH 429 (452)
T ss_pred HHHHHHHH
Confidence 77666543
No 86
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.04 E-value=4.9e-10 Score=106.53 Aligned_cols=102 Identities=21% Similarity=0.266 Sum_probs=92.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+.+|..+...-||| |.|+..||.++++.|+++.+|+|+.++.|+|||||||..|.-.+++-|+..|+.++
T Consensus 56 rgarvn~tnmgddtpl--------hlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~ 127 (448)
T KOG0195|consen 56 RGARVNSTNMGDDTPL--------HLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN 127 (448)
T ss_pred cccccccccCCCCcch--------hhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceee
Confidence 5999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHh---hHHHHHHHHhhcCCCC
Q 007317 94 EHTFDGDRCHYAAL---NLKVRKLLKAYEARPP 123 (608)
Q Consensus 94 ~~d~~g~~~~~aa~---~~~~~~~L~~~~~~~~ 123 (608)
+-++.|.+|...|. ...+.++-..+|..++
T Consensus 128 icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 128 ICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred ecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 99999999877777 4445566667776654
No 87
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.03 E-value=2.6e-10 Score=84.94 Aligned_cols=54 Identities=33% Similarity=0.498 Sum_probs=31.8
Q ss_pred HHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcHHHH
Q 007317 52 ILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYA 105 (608)
Q Consensus 52 Ll~~g-~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~~~a 105 (608)
|+++| ++++.+|..|.||||+||..|+.+++++|+..|++++.+|..|.||...
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~ 55 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHY 55 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHh
Confidence 56777 8999999999999999999999999999999999999999999986543
No 88
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.02 E-value=1e-09 Score=127.32 Aligned_cols=114 Identities=17% Similarity=0.133 Sum_probs=99.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|.+|+||| |+|+..||.++++.|+..++..+. ..|.++||+|+..|+.+++++|+++|++++
T Consensus 580 ~gadin~~d~~G~TpL--------~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin 649 (823)
T PLN03192 580 HACNVHIRDANGNTAL--------WNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVD 649 (823)
T ss_pred cCCCCCCcCCCCCCHH--------HHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCC
Confidence 4899999999999999 999999999999999988766543 357799999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccc-cccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGC 139 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g-~t~l~lac 139 (608)
..|.+|.| +|.|+. +.+++++|+.+|+++.. .+..| .||..++.
T Consensus 650 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~--~~~~g~~t~~~l~~ 697 (823)
T PLN03192 650 SEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK--ANTDDDFSPTELRE 697 (823)
T ss_pred CCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHH
Confidence 99999998 577666 89999999999998776 55556 77777643
No 89
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.02 E-value=1.8e-10 Score=85.79 Aligned_cols=51 Identities=33% Similarity=0.499 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYA 73 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A 73 (608)
.+++|.+|..|.||| |+||..|+.+++++|++.|++++.+|..|+||||+|
T Consensus 6 ~~~~n~~d~~G~T~L--------H~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDKYGNTPL--------HWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---TTS--HH--------HHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred cCCCcCcCCCCCcHH--------HHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 388999999999999 999999999999999999999999999999999987
No 90
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.98 E-value=1.1e-09 Score=118.60 Aligned_cols=111 Identities=22% Similarity=0.295 Sum_probs=97.5
Q ss_pred CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCC---------CC--------------CCCcHHHHHHHcCCH
Q 007317 23 FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR---------DQ--------------WDSVALYYACLAGHL 79 (608)
Q Consensus 23 ~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~---------d~--------------~g~tpLh~A~~~g~~ 79 (608)
-.|.||| |.|..+.+.+.++.|++.|||+|++ |. +|+.||-+||..++.
T Consensus 182 Y~GqSaL--------HiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~ 253 (782)
T KOG3676|consen 182 YYGQSAL--------HIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQP 253 (782)
T ss_pred hcCcchH--------HHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCH
Confidence 3689999 9999999999999999999999875 21 478999999999999
Q ss_pred HHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCC--CCCCCCcccccccccccccccc
Q 007317 80 DAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR--PPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 80 ~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~--~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+++++|+++|||++.+|.+|+|. |..+. ..+|+.+++.+|++ ..+ .+.+|.|||.+|+--.+
T Consensus 254 eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v--~N~qgLTPLtLAaklGk 320 (782)
T KOG3676|consen 254 EIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV--RNNQGLTPLTLAAKLGK 320 (782)
T ss_pred HHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc--cccCCCChHHHHHHhhh
Confidence 99999999999999999999995 54444 78899999999999 444 78899999999997555
No 91
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.97 E-value=1.9e-09 Score=111.37 Aligned_cols=119 Identities=23% Similarity=0.265 Sum_probs=102.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCC-----------------------------------
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNV----------------------------------- 59 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~i----------------------------------- 59 (608)
|++||+.|..||||| |-|+..||+.++++|++.|+++
T Consensus 96 ga~Vn~~d~e~wtPl--------haaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~ie 167 (527)
T KOG0505|consen 96 GANVNAQDNEGWTPL--------HAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIE 167 (527)
T ss_pred cCCccccccccCCcc--------hhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHH
Confidence 999999999999999 9999999999999999887642
Q ss_pred ------------------------CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHHHH
Q 007317 60 ------------------------NARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVR 112 (608)
Q Consensus 60 ------------------------n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~ 112 (608)
+.++..|.|.||+|+..|-.++.++|+..|.+++.+|.+|++| |.++. +.++.
T Consensus 168 a~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~ 247 (527)
T KOG0505|consen 168 AARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDAC 247 (527)
T ss_pred HHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHH
Confidence 1123347899999999999999999999999999999999985 66655 88889
Q ss_pred HHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 113 KLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 113 ~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
++|+.+++.... ....|.||+-++....-
T Consensus 248 elL~~~ga~~d~--~t~~g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 248 ELLVEHGADMDA--KTKMGETPLDVADEEEL 276 (527)
T ss_pred HHHHHhhcccch--hhhcCCCCccchhhhhH
Confidence 999999998876 67889999998766444
No 92
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=1.1e-09 Score=112.08 Aligned_cols=93 Identities=24% Similarity=0.252 Sum_probs=74.8
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (608)
|.-..++.|-|+| |-|++.||++++++|++.|+|+|..|..||||||.||.+++..+++.|++.|+-+....
T Consensus 575 DpSqpNdEGITaL--------HNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsT 646 (752)
T KOG0515|consen 575 DPSQPNDEGITAL--------HNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFAST 646 (752)
T ss_pred CCCCCCccchhHH--------hhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeee
Confidence 4556788899998 88999999999999999999999999999999999999999999999999988877655
Q ss_pred C-CCCcHHHHHh-----hHHHHHHHHh
Q 007317 97 F-DGDRCHYAAL-----NLKVRKLLKA 117 (608)
Q Consensus 97 ~-~g~~~~~aa~-----~~~~~~~L~~ 117 (608)
. ++.|+..-|. ...+..+|..
T Consensus 647 lSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 647 LSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred cccccchhhhcchhhhhHHHHHHHHHH
Confidence 3 5556666665 4555566554
No 93
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.93 E-value=1.7e-09 Score=124.58 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCHHHHHHHHh
Q 007317 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--------------QWDSVALYYACLAGHLDAARMLLE 87 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d--------------~~g~tpLh~A~~~g~~~~v~~Ll~ 87 (608)
+..|.||| |+|+..|+.++++.|+++|++++.++ ..|.||||+|+..|+.+++++|++
T Consensus 125 ~~~G~TpL--------hlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~ 196 (743)
T TIGR00870 125 FTPGITAL--------HLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSE 196 (743)
T ss_pred cCCCCcHH--------HHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhc
Confidence 35699999 99999999999999999999998763 258999999999999999999999
Q ss_pred cCCCcCcccCCCCcH-HHHHhh-----------HHHHHHHHhhcCCCCC-----CCCcccccccccccccccchh
Q 007317 88 SGAICSEHTFDGDRC-HYAALN-----------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGANRQF 145 (608)
Q Consensus 88 ~ga~~~~~d~~g~~~-~~aa~~-----------~~~~~~L~~~~~~~~~-----~~~~~~g~t~l~lac~~~~~~ 145 (608)
+|++++..|..|.|+ |.++.. ..+.++++..+..... ...+..|.||+++|+..++..
T Consensus 197 ~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~ 271 (743)
T TIGR00870 197 DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV 271 (743)
T ss_pred CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCcc
Confidence 999999999999985 666553 2355666666554321 225678999999999877754
No 94
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.92 E-value=2.1e-09 Score=115.13 Aligned_cols=124 Identities=22% Similarity=0.325 Sum_probs=101.9
Q ss_pred CCCCCeeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhc-Ccccc-----Chhh
Q 007317 168 SFPPDVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEI-----AVDD 240 (608)
Q Consensus 168 ~~~~Dv~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i-----~~~~ 240 (608)
+..-|+.+.. +|+.++|||++|++|++||..||...|.|.+...+....+..+.++.+|+|+|+ ++..+ ..+.
T Consensus 708 ~e~~d~~i~~KDGkvl~aHkc~L~aRlEYF~smf~~~w~E~sS~t~~~~p~~~e~m~ivLdylYs~d~~~~~k~~~~~dF 787 (1267)
T KOG0783|consen 708 EETMDTVIKLKDGKVLKAHKCFLSARLEYFSSMFQFVWMESSSITVNLSPLTVEHMSIVLDYLYSDDKVELFKDLKESDF 787 (1267)
T ss_pred ccceeEEEEecCCcCcccceeEeeeHHHHHHHHHHHHHhhhccceeecCcchHHHHHHHHHHHHccchHHHHhccchhhh
Confidence 4455777766 778899999999999999999999999999888888777889999999999995 44432 3345
Q ss_pred HHHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 241 MEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 241 ~~~ll~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
+-+++.+|+++-+..|++.++ ++-.+++||..|+++.|...|.+||+.|..
T Consensus 788 ~~~il~iaDqlli~~Lk~Ice~~ll~kl~lk~~~~llefaamY~ak~L~~~C~dfic~N~~ 848 (1267)
T KOG0783|consen 788 MFEILSIADQLLILELKSICEQSLLRKLNLKTLPTLLEFAAMYHAKELYSRCIDFICHNIE 848 (1267)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHhcccchHHHHHHHHHhhHHHHHHHHHHHHHHhHH
Confidence 678888887665677766655 467789999999999999999999999864
No 95
>PHA02792 ankyrin-like protein; Provisional
Probab=98.90 E-value=4.3e-09 Score=114.34 Aligned_cols=102 Identities=14% Similarity=0.014 Sum_probs=89.6
Q ss_pred hhHhhhcCCHHHHHHHHHcCCCCCCCCCCC--CcHHHHHHHcCCHH---HHHHHHhcCCCcCcccCCCCc-HHHHHh--h
Q 007317 37 VFEASRAGDVDRLRYILESGVNVNARDQWD--SVALYYACLAGHLD---AARMLLESGAICSEHTFDGDR-CHYAAL--N 108 (608)
Q Consensus 37 l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g--~tpLh~A~~~g~~~---~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~ 108 (608)
++.|+..|+.+++++|+++|++++.+|..| .||||+|+..+..+ ++++|+++|++++.+|..|.| +|+|+. +
T Consensus 343 ~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n 422 (631)
T PHA02792 343 YFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHS 422 (631)
T ss_pred HHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCC
Confidence 499999999999999999999999999775 69999988776654 578889999999999999998 577766 8
Q ss_pred HHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 109 ~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
.+++++|+.+|++.+. .+..|.||++.|..
T Consensus 423 ~eivelLLs~GADIN~--kD~~G~TpL~~A~~ 452 (631)
T PHA02792 423 VSLVEWLIDNGADINI--TTKYGSTCIGICVI 452 (631)
T ss_pred HHHHHHHHHCCCCCCC--cCCCCCCHHHHHHH
Confidence 8999999999998876 78899999999864
No 96
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.90 E-value=6.3e-09 Score=117.38 Aligned_cols=100 Identities=27% Similarity=0.307 Sum_probs=87.2
Q ss_pred hhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHHHH
Q 007317 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVR 112 (608)
Q Consensus 36 ~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~ 112 (608)
.|+.|+..|+.+.++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|| |+++. +.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999999999985 66666 88999
Q ss_pred HHHHhh-------cCCCCCCCCcccccccccc
Q 007317 113 KLLKAY-------EARPPPLGPLQAALRDTFL 137 (608)
Q Consensus 113 ~~L~~~-------~~~~~~~~~~~~g~t~l~l 137 (608)
++|+.+ +++..+ ....|.+|+..
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~--~~~~g~~~~~~ 194 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKP--DSFTGKPPSLE 194 (664)
T ss_pred HHHHhCCCcccccCCCCCc--cccCCCCccch
Confidence 999988 555544 45556666543
No 97
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.88 E-value=4.5e-09 Score=100.12 Aligned_cols=94 Identities=24% Similarity=0.318 Sum_probs=84.4
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (608)
+|.+|.+|.+|| ..|+..|+.+.++.|++.|+|+|.. +..++||||.||..|+.+++++|++.|+.+...|
T Consensus 38 vn~~D~sGMs~L--------ahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vN 109 (396)
T KOG1710|consen 38 VNQRDPSGMSVL--------AHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVN 109 (396)
T ss_pred hhccCCCcccHH--------HHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccccc
Confidence 899999999999 9999999999999999999999975 5689999999999999999999999999999999
Q ss_pred CCCCcH-HHHHh--hHHHHHHHHhhc
Q 007317 97 FDGDRC-HYAAL--NLKVRKLLKAYE 119 (608)
Q Consensus 97 ~~g~~~-~~aa~--~~~~~~~L~~~~ 119 (608)
.-|+|+ .-+|. +++++.++.++-
T Consensus 110 svgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 110 SVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred chhhhHHHHHHHhcchHHHHHHhccc
Confidence 999985 44444 888888876643
No 98
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.86 E-value=6.4e-09 Score=119.85 Aligned_cols=118 Identities=19% Similarity=0.175 Sum_probs=95.1
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhh-HhhhcCCHHHHHHHHHcCCC-----------------------------------
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVF-EASRAGDVDRLRYILESGVN----------------------------------- 58 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~-~A~~~g~~~~~~~Ll~~g~~----------------------------------- 58 (608)
+.++|..|..|+||| | .|+.+++.++++.|+.+|+.
T Consensus 42 ~~~in~~d~~G~t~L--------h~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~ 113 (743)
T TIGR00870 42 KLNINCPDRLGRSAL--------FVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGP 113 (743)
T ss_pred ccCCCCcCccchhHH--------HHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCc
Confidence 788999999999999 8 77777788888887776620
Q ss_pred ---CCC----CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc--------------CCCCc-HHHHHh--hHHHHHH
Q 007317 59 ---VNA----RDQWDSVALYYACLAGHLDAARMLLESGAICSEHT--------------FDGDR-CHYAAL--NLKVRKL 114 (608)
Q Consensus 59 ---in~----~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d--------------~~g~~-~~~aa~--~~~~~~~ 114 (608)
++. .+..|.||||+|+..|+.+++++|+++|++++..+ ..|.+ ++.++. +.+++++
T Consensus 114 ~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~l 193 (743)
T TIGR00870 114 LELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVAL 193 (743)
T ss_pred hhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHH
Confidence 000 12358999999999999999999999999998653 24666 566666 8999999
Q ss_pred HHhhcCCCCCCCCccccccccccccccc
Q 007317 115 LKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 115 L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
|+++|++++. .+..|.||+|+|+..+
T Consensus 194 Ll~~gadin~--~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 194 LSEDPADILT--ADSLGNTLLHLLVMEN 219 (743)
T ss_pred HhcCCcchhh--HhhhhhHHHHHHHhhh
Confidence 9999987765 7889999999999865
No 99
>PHA02792 ankyrin-like protein; Provisional
Probab=98.85 E-value=8.3e-09 Score=112.11 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=84.5
Q ss_pred CCCCCCCCCCCC--CCCCCCCCchhhhHhhhcCCH---HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007317 14 DEIDLDASDFSS--SVPLKKVPNGDVFEASRAGDV---DRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (608)
Q Consensus 14 ~~~~l~~~d~~g--~tpL~~~~~~~l~~A~~~g~~---~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 88 (608)
.|+++|.+|..| .||| |.|+..+.. ++++.|+++|+++|.+|..|+||||+|+..++.+++++|+++
T Consensus 361 ~GADIN~kD~~g~~~TpL--------h~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~ 432 (631)
T PHA02792 361 NGNVVVEDDDNIINIMPL--------FPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDN 432 (631)
T ss_pred cCCchhhhcCCCCChhHH--------HHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHC
Confidence 499999999886 4777 887766654 457888999999999999999999999999999999999999
Q ss_pred CCCcCcccCCCCcH-HHHHh------------hHHHHHHHHhhcCCC
Q 007317 89 GAICSEHTFDGDRC-HYAAL------------NLKVRKLLKAYEARP 122 (608)
Q Consensus 89 ga~~~~~d~~g~~~-~~aa~------------~~~~~~~L~~~~~~~ 122 (608)
|++++..|..|.|| +.++. ..+++++|+.++.++
T Consensus 433 GADIN~kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i 479 (631)
T PHA02792 433 GADINITTKYGSTCIGICVILAHACIPEIAELYIKILEIILSKLPTI 479 (631)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCCh
Confidence 99999999999985 44432 245678888877554
No 100
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.83 E-value=2.3e-09 Score=114.59 Aligned_cols=118 Identities=21% Similarity=0.177 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
..+|..|.+|.|.| |.||.+|+..+++.|+++.+-++..|..|.+|||+|++.|+.++++.|+.++..++..
T Consensus 40 ds~n~qd~~gfTal--------hha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~ 111 (854)
T KOG0507|consen 40 DSHNLQDYSGFTLL--------HHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAV 111 (854)
T ss_pred ccccccCccchhHH--------HHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcc
Confidence 45677777889998 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 96 d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+..|.+ +|.++. +.+++.+|+.+++++.. .+..+.|++-+||+-.+
T Consensus 112 ~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i--~nns~~t~ldlA~qfgr 160 (854)
T KOG0507|consen 112 NIENETPLHLAAQHGHLEVVFYLLKKNADPFI--RNNSKETVLDLASRFGR 160 (854)
T ss_pred cccCcCccchhhhhcchHHHHHHHhcCCCccc--cCcccccHHHHHHHhhh
Confidence 999987 688887 89999999999999887 78889999999998555
No 101
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.80 E-value=1.9e-08 Score=97.63 Aligned_cols=98 Identities=30% Similarity=0.376 Sum_probs=88.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCC-----HHHHHHHHHcCC---CCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGD-----VDRLRYILESGV---NVNARDQWDSVALYYACLAGHLDAARML 85 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~-----~~~~~~Ll~~g~---~in~~d~~g~tpLh~A~~~g~~~~v~~L 85 (608)
.|++++.++..|.||| |+|+..|+ .++++.|++.|+ ..+.+|..|+||||+|+..|+.+++..|
T Consensus 95 ~~~~~~~~~~~g~t~l--------~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~l 166 (235)
T COG0666 95 SGADVNAKDADGDTPL--------HLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166 (235)
T ss_pred cCCCcccccCCCCcHH--------HHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHH
Confidence 5899999999999999 99999999 999999999999 5667799999999999999999999999
Q ss_pred HhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhc
Q 007317 86 LESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYE 119 (608)
Q Consensus 86 l~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~ 119 (608)
++.|++++..+..|.| ++.++. +..++..+...+
T Consensus 167 l~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 167 LEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred HhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 9999999999999998 466665 777778887765
No 102
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.79 E-value=4.3e-08 Score=95.02 Aligned_cols=122 Identities=30% Similarity=0.425 Sum_probs=106.0
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-----HHHHHHHHhcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH-----LDAARMLLESG 89 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~-----~~~v~~Ll~~g 89 (608)
....+..+..+++++ |.++..+...+++.++..|++++.++..|.||||+|+..|+ .+++++|++.|
T Consensus 63 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g 134 (235)
T COG0666 63 DRHLAARDLDGRLPL--------HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG 134 (235)
T ss_pred ccccccCCccccCHH--------HHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcC
Confidence 444555667788888 99999999999999999999999999999999999999999 99999999999
Q ss_pred C---CcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccchhh
Q 007317 90 A---ICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFL 146 (608)
Q Consensus 90 a---~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~l 146 (608)
+ ..+..|..|.|| |+++. +..++++|+..++.+.. .+..|.|+++.+|...+...
T Consensus 135 ~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~--~~~~g~t~l~~a~~~~~~~~ 195 (235)
T COG0666 135 ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS--RNSYGVTALDPAAKNGRIEL 195 (235)
T ss_pred CCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc--cccCCCcchhhhcccchHHH
Confidence 9 666779999984 66666 77899999999888776 67899999999998776543
No 103
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.75 E-value=1.7e-08 Score=113.93 Aligned_cols=81 Identities=25% Similarity=0.338 Sum_probs=76.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc-----
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES----- 88 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~----- 88 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.+
T Consensus 104 ~Gadin~~d~~G~TpL--------h~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 175 (664)
T PTZ00322 104 GGADPNCRDYDGRTPL--------HIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHF 175 (664)
T ss_pred CCCCCCCcCCCCCcHH--------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCccc
Confidence 4899999999999999 999999999999999999999999999999999999999999999999998
Q ss_pred --CCCcCcccCCCCcH
Q 007317 89 --GAICSEHTFDGDRC 102 (608)
Q Consensus 89 --ga~~~~~d~~g~~~ 102 (608)
|++++..+..|.++
T Consensus 176 ~~ga~~~~~~~~g~~~ 191 (664)
T PTZ00322 176 ELGANAKPDSFTGKPP 191 (664)
T ss_pred ccCCCCCccccCCCCc
Confidence 88888888888764
No 104
>KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=98.74 E-value=3.7e-08 Score=98.28 Aligned_cols=123 Identities=17% Similarity=0.201 Sum_probs=104.5
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEE----cCCCCHHHHHHHHHHHhcCccccChhhHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFS----REKLSYPALYGLIHFFYSDRLEIAVDDMED 243 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~----l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ 243 (608)
+..+||.+..-|.++..||..|. .|+||++||.|.|++++...|. -+.|+..++...+.-+|.+++.|..+++..
T Consensus 67 ~enSDv~l~alg~eWrlHk~yL~-QS~yf~smf~Gtw~es~~~iIqleI~Dp~Id~~al~~a~gsLY~dEveI~l~dv~g 145 (488)
T KOG4682|consen 67 GENSDVILEALGFEWRLHKPYLF-QSEYFKSMFSGTWKESSMNIIQLEIPDPNIDVVALQVAFGSLYRDEVEIKLSDVVG 145 (488)
T ss_pred CCCcceehhhccceeeeeeeeee-ccHHHHHHhccccChhhCceEEEEcCCCcccHHHHHHHHhhhhhhheeccHHHHHH
Confidence 33569999999999999999985 7899999999999998765544 468999999999999999999999999999
Q ss_pred HHHHHhHhcHHHHHHHH--------H--HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 244 LVKICKVCKCESLQRII--------E--KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 244 ll~~A~~c~~~~L~~~l--------~--~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
++.+|...+.+.|.+.| . +....+..+..||...+.+.|.+++..|+.
T Consensus 146 vlAaA~~lqldgl~qrC~evMie~lspkta~~yYea~ckYgle~vk~kc~ewl~~nl~ 203 (488)
T KOG4682|consen 146 VLAAACLLQLDGLIQRCGEVMIETLSPKTACGYYEAACKYGLESVKKKCLEWLLNNLM 203 (488)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhcChhhhhHhhhhhhhhhhHHHHHHHHHHHHHhhH
Confidence 99999655555554443 2 467789999999999999999999988874
No 105
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.74 E-value=8.1e-08 Score=94.88 Aligned_cols=111 Identities=15% Similarity=0.126 Sum_probs=81.3
Q ss_pred eeeehhhhhHhccCHHHHHhcccccCcCc-c---cEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHHHhHhcHH-
Q 007317 180 RPIEAHRVILSARSVFFRRKFETDWRYRN-E---IRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVCKCE- 254 (608)
Q Consensus 180 ~~~~~Hk~iL~arS~~F~~lf~~~~~e~~-~---~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~A~~c~~~- 254 (608)
.++|||.++++ |++||+.||.|++.+++ . ....+++....+.+..++|+|+++.++.++-..+++-+|....+.
T Consensus 301 ~RyP~hla~i~-R~eyfk~mf~g~f~e~s~n~~~p~lslp~~~~~vveI~lr~lY~d~tdi~~~~A~dvll~ad~lal~~ 379 (516)
T KOG0511|consen 301 DRYPAHLARIL-RVEYFKSMFVGDFIESSVNDTRPGLSLPSLADVVVEIDLRNLYCDQTDIIFDVASDVLLFADKLALAD 379 (516)
T ss_pred ccccHHHHHHH-HHHHHHHHhccchhhhcCCccccccccchHHHHHHHHHHHHhhcccccchHHHHhhHHHHhhHhhhhh
Confidence 46999999985 78999999999998843 2 234556677789999999999999999999887777776432111
Q ss_pred -H-HHH-----------HHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 255 -S-LQR-----------IIE--KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 255 -~-L~~-----------~l~--~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
. |+. .++ +++.++.++-..+..++...+..|+..+..
T Consensus 380 dr~Lkt~as~~itq~~e~id~y~V~dIl~~~wd~~~~rlEqfa~~~~a~hl~ 431 (516)
T KOG0511|consen 380 DRLLKTAASAEITQWLELIDMYGVLDILEYCWDLVACRLEQFAETHEARHLL 431 (516)
T ss_pred hhhhhhhhhHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 1 111 111 367777788888888888888888777653
No 106
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.74 E-value=2e-08 Score=107.53 Aligned_cols=123 Identities=20% Similarity=0.129 Sum_probs=103.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
+.+-++..|..|.+|| |+|++.|+.+++++++.++..+|.++..|.||||.|+..||.+++.+|+.+|+++-
T Consensus 71 ~ea~ldl~d~kg~~pl--------hlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~ 142 (854)
T KOG0507|consen 71 YEALLDLCDTKGILPL--------HLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF 142 (854)
T ss_pred chhhhhhhhccCcceE--------EehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcc
Confidence 3777888899999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHh---hHHHHHHHHhhcCC------CCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDRCHYAAL---NLKVRKLLKAYEAR------PPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~~~~aa~---~~~~~~~L~~~~~~------~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+.|..+.+++.++. ..+++.+|+..... ..-......+.+|+|+|..+++.
T Consensus 143 i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~ 202 (854)
T KOG0507|consen 143 IRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHV 202 (854)
T ss_pred ccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchH
Confidence 99999999887777 77788877764221 11112344677999998876664
No 107
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.66 E-value=1.8e-07 Score=81.46 Aligned_cols=93 Identities=34% Similarity=0.487 Sum_probs=81.9
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
+.+.+..+..|.+|+ |.|+..++.++++.|+..|++++..+..|.||+|+|+..++.+++++|+.+|.+.+.
T Consensus 30 ~~~~~~~~~~g~~~l--------~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~ 101 (126)
T cd00204 30 GADVNAKDNDGRTPL--------HLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNA 101 (126)
T ss_pred CCCCCccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc
Confidence 556688899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHh---hHHHHHHH
Q 007317 95 HTFDGDRCHYAAL---NLKVRKLL 115 (608)
Q Consensus 95 ~d~~g~~~~~aa~---~~~~~~~L 115 (608)
.+..|.++...+. +.+++++|
T Consensus 102 ~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 102 RDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred cCCCCCCHHHHHHhcCCHHHHHHh
Confidence 9999998655444 55555554
No 108
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.51 E-value=2.8e-07 Score=68.00 Aligned_cols=51 Identities=35% Similarity=0.526 Sum_probs=40.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHH
Q 007317 66 DSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLK 116 (608)
Q Consensus 66 g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~ 116 (608)
|+||||+|+..|+.+++++|+++|++++.+|..|.|| |+++. +.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999999999999999985 77776 888888874
No 109
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.47 E-value=4.5e-07 Score=93.22 Aligned_cols=102 Identities=24% Similarity=0.198 Sum_probs=88.2
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~ 111 (608)
..|.-|+..|-+++++..+..-.|+...+..|.|+||-|...||.++|++|+++|+++|..|.+|+| +|.+|. +..+
T Consensus 552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ 631 (752)
T KOG0515|consen 552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM 631 (752)
T ss_pred HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence 3456799999999999999888899999999999999999999999999999999999999999998 577777 7778
Q ss_pred HHHHHhhcCCCCCCCCcccccccccc
Q 007317 112 RKLLKAYEARPPPLGPLQAALRDTFL 137 (608)
Q Consensus 112 ~~~L~~~~~~~~~~~~~~~g~t~l~l 137 (608)
.+.|..+|+-+-.. ...++.|+...
T Consensus 632 ckqLVe~GaavfAs-TlSDmeTa~eK 656 (752)
T KOG0515|consen 632 CKQLVESGAAVFAS-TLSDMETAAEK 656 (752)
T ss_pred HHHHHhccceEEee-ecccccchhhh
Confidence 89999999865432 44566677765
No 110
>PF13606 Ank_3: Ankyrin repeat
Probab=98.43 E-value=2.8e-07 Score=58.70 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=27.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 65 WDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 65 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
+|+||||+||..|+.+++++|+++|++++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999873
No 111
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=98.36 E-value=3.6e-07 Score=77.42 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=60.3
Q ss_pred HHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHH
Q 007317 483 LCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKW 562 (608)
Q Consensus 483 ~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W 562 (608)
|+.++.+|..|++..|.+.|.+||..||..+..+++|.+|..+ .+..++ +++++....| .+++ +++++|
T Consensus 1 C~~i~~~A~~~~~~~L~~~~~~~i~~nf~~v~~~~~f~~L~~~----~l~~iL--~~~~l~v~~E----~~v~-~av~~W 69 (103)
T PF07707_consen 1 CLSIYRLAEKYGLEELAEACLRFIAKNFNEVSKSDEFLELPFD----QLIEIL--SSDDLNVSSE----DDVF-EAVLRW 69 (103)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHTHHHHTTSHHHHCS-HH----HHHHHH--HTSS--ECTC----CCHH-HHHHHH
T ss_pred ChhHHHHHHHcChHHHHHHHHHHHHHHHHHHccchhhhcCCHH----HHHHHH--hccccccccH----HHHH-HHHHHH
Confidence 7899999999999999999999999999999999999965554 432222 5566656667 6777 999999
Q ss_pred HHHhhhhh
Q 007317 563 LEAEAAEL 570 (608)
Q Consensus 563 ~~~~~~~~ 570 (608)
+++++...
T Consensus 70 ~~~~~~~r 77 (103)
T PF07707_consen 70 LKHNPENR 77 (103)
T ss_dssp HHCTHHHH
T ss_pred HHhCHHHH
Confidence 99998754
No 112
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.33 E-value=8.6e-07 Score=58.00 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=30.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 65 WDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 65 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
+|+||||+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998764
No 113
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.32 E-value=1.3e-06 Score=89.36 Aligned_cols=95 Identities=20% Similarity=0.141 Sum_probs=78.3
Q ss_pred CCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCC
Q 007317 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (608)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 98 (608)
.+|++|.+. +..+.+||-+++.|+.++.-.|+..|++.|..+ +.|.||||+|+..|+.--+++|+=+|||+...|.+
T Consensus 122 ~rDdD~~~~--~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~ 199 (669)
T KOG0818|consen 122 CRDDDSVTA--KDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSS 199 (669)
T ss_pred CCCcchhhH--HHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCC
Confidence 344554444 244678899999999999999999999999987 47999999999999999999999999999999999
Q ss_pred CCcHHHHHh---hHHHHHHHH
Q 007317 99 GDRCHYAAL---NLKVRKLLK 116 (608)
Q Consensus 99 g~~~~~aa~---~~~~~~~L~ 116 (608)
|.+|...|+ |.++.+-|.
T Consensus 200 GmtP~~~AR~~gH~~laeRl~ 220 (669)
T KOG0818|consen 200 GMTPVDYARQGGHHELAERLV 220 (669)
T ss_pred CCcHHHHHHhcCchHHHHHHH
Confidence 999766666 555544333
No 114
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.28 E-value=7.7e-07 Score=80.32 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=97.0
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCcCcccCCCCcHHHHHh---hHHHHHHHHhhcCCCCCCCCcccc
Q 007317 56 GVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICSEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPPLGPLQAA 131 (608)
Q Consensus 56 g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~~~~~aa~---~~~~~~~L~~~~~~~~~~~~~~~g 131 (608)
+.++|.+|..||||++.|+..|+.+.+.||+.+| +.+...|..|......+. ..+.++.|..+............+
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~nss~~ 81 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMNSSRD 81 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCcccCCCC
Confidence 4689999999999999999999999999999999 999999999998655555 777888888765443332222333
Q ss_pred cccccccccccchhhHHHHHHhhcccccCCCCCCCCCCCCCeeEEecCeeee---hhhhhHhccCHHHHHhcccccCcC
Q 007317 132 LRDTFLGCGANRQFLEEAEVVLGISGVTSNGASNSDSFPPDVVFYVQGRPIE---AHRVILSARSVFFRRKFETDWRYR 207 (608)
Q Consensus 132 ~t~l~lac~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~v~~~~~~---~Hk~iL~arS~~F~~lf~~~~~e~ 207 (608)
.++ ..|+.++.++++.+...|..+.. =..+.+.+| .|...+...|.-|+-|..++|.+.
T Consensus 82 e~l--fyCE~Cd~~ip~~~~snH~tStt---------------Hllsl~~~pa~k~~p~~i~pks~GyrLl~~~GW~pe 143 (223)
T KOG2384|consen 82 EAL--FYCEVCDIYIPNSKKSNHFTSTT---------------HLLSLQHIPANKFQPHLIKPKSLGYRLLSQYGWSPE 143 (223)
T ss_pred Ccc--chhhhhhhhccCCCCccchhhHH---------------HHhhhccCCCCCCCCCcCCCCCchHHHHHhcCCCcc
Confidence 333 34888888888766666666531 111222333 445567788888898888888653
No 115
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=2.8e-06 Score=81.45 Aligned_cols=100 Identities=26% Similarity=0.197 Sum_probs=85.1
Q ss_pred hHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc-cCCCCc-HHHHHh--hHHHHH
Q 007317 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH-TFDGDR-CHYAAL--NLKVRK 113 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~~-~~~aa~--~~~~~~ 113 (608)
..+.-.|+.+.+..|++.--++|.+|..|+|+|..|+..|+.++++.|++.|+|+|.. +..+-| ++++|. +.++-.
T Consensus 17 le~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcr 96 (396)
T KOG1710|consen 17 LEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCR 96 (396)
T ss_pred HHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHH
Confidence 9999999999999999765569999999999999999999999999999999999953 344446 688887 889999
Q ss_pred HHHhhcCCCCCCCCcccccccccccc
Q 007317 114 LLKAYEARPPPLGPLQAALRDTFLGC 139 (608)
Q Consensus 114 ~L~~~~~~~~~~~~~~~g~t~l~lac 139 (608)
+|++.|++... .+.-|+|+-.+|.
T Consensus 97 llldaGa~~~~--vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 97 LLLDAGARMYL--VNSVGRTAAQMAA 120 (396)
T ss_pred HHHhccCcccc--ccchhhhHHHHHH
Confidence 99999988765 5566778776654
No 116
>PF13606 Ank_3: Ankyrin repeat
Probab=98.17 E-value=1.6e-06 Score=55.13 Aligned_cols=30 Identities=37% Similarity=0.746 Sum_probs=28.2
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCC
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA 61 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~ 61 (608)
+|+||| |+||..|+++++++|+++|+|+|.
T Consensus 1 ~G~T~L--------h~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPL--------HLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHH--------HHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999 999999999999999999999974
No 117
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.15 E-value=2.4e-06 Score=94.81 Aligned_cols=84 Identities=25% Similarity=0.296 Sum_probs=45.0
Q ss_pred hHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc-cCCCCc-HHHHHh--hHHHHH
Q 007317 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH-TFDGDR-CHYAAL--NLKVRK 113 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~~-~~~aa~--~~~~~~ 113 (608)
..||.+||.++++.|+.+|+++..+|+.|.+||.+|+..||..+|..|+.+.++++.. |+.+.| +..+|. ..++++
T Consensus 762 T~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vve 841 (2131)
T KOG4369|consen 762 TSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVE 841 (2131)
T ss_pred cccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHH
Confidence 5566666666666666666666666666666666666666666666666555555532 333333 222222 444444
Q ss_pred HHHhhcCC
Q 007317 114 LLKAYEAR 121 (608)
Q Consensus 114 ~L~~~~~~ 121 (608)
+|+++|++
T Consensus 842 lLl~~gan 849 (2131)
T KOG4369|consen 842 LLLNAGAN 849 (2131)
T ss_pred HHHHhhcc
Confidence 44444443
No 118
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.13 E-value=1.5e-06 Score=96.26 Aligned_cols=113 Identities=18% Similarity=0.172 Sum_probs=95.0
Q ss_pred CCchhhhHhhhcCCHHHHHHHHHcCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--
Q 007317 32 VPNGDVFEASRAGDVDRLRYILESGVNVNAR-DQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL-- 107 (608)
Q Consensus 32 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~-- 107 (608)
..+..|..|+-.||..+++.|+++.++++.+ |..+.|+|-+||..|..+++++|+..|++-..++-...|| ..++.
T Consensus 789 kgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sgg 868 (2131)
T KOG4369|consen 789 KGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGG 868 (2131)
T ss_pred ccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcc
Confidence 4667789999999999999999999999876 5688999999999999999999999999987776655564 44433
Q ss_pred hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 108 NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 108 ~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..+++++|+.+|.-++-......|..||.+|.+..+.
T Consensus 869 y~~iI~~llS~GseInSrtgSklgisPLmlatmngh~ 905 (2131)
T KOG4369|consen 869 YTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQ 905 (2131)
T ss_pred hHHHHHHHhhcccccccccccccCcchhhhhhhcccc
Confidence 8899999999997665544677899999999987664
No 119
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.08 E-value=1.1e-05 Score=88.21 Aligned_cols=82 Identities=18% Similarity=0.096 Sum_probs=74.3
Q ss_pred hHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--cCcccCCCCcHH-HHHh--hHHHH
Q 007317 38 FEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDRCH-YAAL--NLKVR 112 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~~~~-~aa~--~~~~~ 112 (608)
..||.-++.+++++|+++|+|++++|.+|+|.||..+.+-..+|-.+++++|++ ....|..|.||. .||. ..++.
T Consensus 245 SfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf 324 (782)
T KOG3676|consen 245 SFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMF 324 (782)
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999 889999999864 4444 88888
Q ss_pred HHHHhhc
Q 007317 113 KLLKAYE 119 (608)
Q Consensus 113 ~~L~~~~ 119 (608)
+.+++..
T Consensus 325 ~~ile~~ 331 (782)
T KOG3676|consen 325 QHILERR 331 (782)
T ss_pred HHHHHhh
Confidence 8887753
No 120
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.04 E-value=5.6e-06 Score=84.43 Aligned_cols=86 Identities=26% Similarity=0.275 Sum_probs=78.0
Q ss_pred hhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcCcccCCCCcHHHHHh---hHHHH
Q 007317 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDGDRCHYAAL---NLKVR 112 (608)
Q Consensus 37 l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~~~~~aa~---~~~~~ 112 (608)
+++|+..|+++.++.+.-.|.|++.+|-..+|+||+||..|+++++++|++. +.+++..|..|++|..-|. |.+++
T Consensus 510 ~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~ 589 (622)
T KOG0506|consen 510 VMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVV 589 (622)
T ss_pred hhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHH
Confidence 3999999999999999999999999999999999999999999999999975 8999999999998766665 89999
Q ss_pred HHHHhhcCCC
Q 007317 113 KLLKAYEARP 122 (608)
Q Consensus 113 ~~L~~~~~~~ 122 (608)
++|.......
T Consensus 590 k~L~~~~~~y 599 (622)
T KOG0506|consen 590 KLLEEAQYPY 599 (622)
T ss_pred HHHHHHhccc
Confidence 9998876543
No 121
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.02 E-value=4.2e-06 Score=54.72 Aligned_cols=33 Identities=33% Similarity=0.638 Sum_probs=30.8
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ 64 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~ 64 (608)
+|.||| |+|+..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpL--------h~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPL--------HYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHH--------HHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHH--------HHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999 999999999999999999999999874
No 122
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=97.91 E-value=6.6e-06 Score=69.17 Aligned_cols=74 Identities=19% Similarity=0.232 Sum_probs=58.4
Q ss_pred HHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHH
Q 007317 483 LCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKW 562 (608)
Q Consensus 483 ~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W 562 (608)
|+.++.+|..|++..|.+.|.+||..||..+..+++|.+|.. +.+..++ .++++.+..| .+++ .++.+|
T Consensus 1 c~~i~~~a~~~~~~~L~~~~~~~i~~nf~~~~~~~~f~~L~~----~~l~~iL--~~d~l~v~~E----~~v~-~av~~W 69 (101)
T smart00875 1 CLGIRRFAELYGLEELLEKALRFILKNFLEVAQSEEFLELSL----EQLLSLL--SSDDLNVPSE----EEVF-EAVLRW 69 (101)
T ss_pred CHhHHHHHHHhChHHHHHHHHHHHHHHHHHHhcCcHHhcCCH----HHHHHHh--CcccCCCCCH----HHHH-HHHHHH
Confidence 467888999999999999999999999999999999986544 3432222 4455555556 5667 999999
Q ss_pred HHHhh
Q 007317 563 LEAEA 567 (608)
Q Consensus 563 ~~~~~ 567 (608)
+++++
T Consensus 70 ~~~~~ 74 (101)
T smart00875 70 VKHDP 74 (101)
T ss_pred HHCCH
Confidence 99987
No 123
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.87 E-value=1.5e-05 Score=82.70 Aligned_cols=109 Identities=18% Similarity=0.116 Sum_probs=60.9
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC--cCcccCCCCc-HHHHHh--hH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--CSEHTFDGDR-CHYAAL--NL 109 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~~-~~~aa~--~~ 109 (608)
..+..|+..+++--++.+-.+|.++-.++..-.|.||+|+..|+.++|+|++++|.. .+..|..|.| +|.++. +.
T Consensus 868 eeil~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r 947 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR 947 (1004)
T ss_pred HHHHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence 334556666665555555555656555666666666666666666666666666543 3344555555 344444 55
Q ss_pred HHHHHHHhhcCCCCCCCCcccccccccccccccchh
Q 007317 110 KVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQF 145 (608)
Q Consensus 110 ~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~ 145 (608)
.+-.+|...|+.... .+..|+||-.-|.++.++.
T Consensus 948 ~vc~~lvdagasl~k--td~kg~tp~eraqqa~d~d 981 (1004)
T KOG0782|consen 948 AVCQLLVDAGASLRK--TDSKGKTPQERAQQAGDPD 981 (1004)
T ss_pred HHHHHHHhcchhhee--cccCCCChHHHHHhcCCch
Confidence 555666665555444 4555666665555555543
No 124
>KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=97.78 E-value=0.00022 Score=68.08 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=56.4
Q ss_pred cccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCC
Q 007317 336 SDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGL 415 (608)
Q Consensus 336 ~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~ 415 (608)
.+......|+-++.....|++||++|++|||+|+.+.++. .--| ....-.|..-+++.++|+.+|+|+|+|+.
T Consensus 124 ~ye~k~c~dldiiFkeTcfpahRA~laaRCpffK~l~nsd-~e~~------ae~i~dik~ag~dm~~feafLh~l~tgEf 196 (401)
T KOG2838|consen 124 GYERKVCGDLDIIFKETCFPAHRAFLAARCPFFKILANSD-EEPE------AEDICDIKFAGFDMDAFEAFLHSLITGEF 196 (401)
T ss_pred hhheeeeccceeeeeeccchHHHHHHHhhCcchhhhccCC-CCcc------hhhhhhhhhhccChHHHHHHHHHHHhccc
Confidence 4444566788899888999999999999999999998761 1001 01122355567899999999999999988
Q ss_pred C
Q 007317 416 K 416 (608)
Q Consensus 416 ~ 416 (608)
-
T Consensus 197 g 197 (401)
T KOG2838|consen 197 G 197 (401)
T ss_pred c
Confidence 5
No 125
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=97.75 E-value=0.00018 Score=68.65 Aligned_cols=99 Identities=21% Similarity=0.332 Sum_probs=81.4
Q ss_pred EEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCccc
Q 007317 345 VCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQVC 424 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~~ 424 (608)
|.+-|||..|...+.-|.....||++|+.. ++.- .......|-|+ =||..|..||+||..|.+. ++..
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~--~i~~-----~~d~s~~IFID-RSpKHF~~ILNfmRdGdv~-LPe~--- 74 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLET--DIPV-----EKDESGCIFID-RSPKHFDTILNFMRDGDVD-LPES--- 74 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhc--CCcc-----ccCCcCcEEec-CChhHHHHHHHhhhccccc-Cccc---
Confidence 568899999999999999999999999998 3321 11223456665 4899999999999999996 7766
Q ss_pred ccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 425 CNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
...+.+|+.-|.+|.+++|...|...+....
T Consensus 75 --------------------~kel~El~~EA~fYlL~~Lv~~C~~~i~~~~ 105 (230)
T KOG2716|consen 75 --------------------EKELKELLREAEFYLLDGLVELCQSAIARLI 105 (230)
T ss_pred --------------------hHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc
Confidence 2388999999999999999999999887654
No 126
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.71 E-value=8.1e-05 Score=77.87 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=75.2
Q ss_pred chhhhHhhhcCCHHHHHHHHHcCCCC--C--CCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcHHHHHh--
Q 007317 34 NGDVFEASRAGDVDRLRYILESGVNV--N--ARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL-- 107 (608)
Q Consensus 34 ~~~l~~A~~~g~~~~~~~Ll~~g~~i--n--~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~~~aa~-- 107 (608)
..+|..|....++..+-.|+.+|... | .-+..|+|+||+||..|+....++|+-+|+|+...|.+|.|+...|+
T Consensus 625 gqqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 625 GQQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 35678899999999999999998643 2 33457899999999999999999999999999999999999654444
Q ss_pred -hHHHHHHHHhhcCCC
Q 007317 108 -NLKVRKLLKAYEARP 122 (608)
Q Consensus 108 -~~~~~~~L~~~~~~~ 122 (608)
..+++.+|+.+|+..
T Consensus 705 ~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPD 720 (749)
T ss_pred ccHHHHHHHHHcCCCc
Confidence 788999999999753
No 127
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.68 E-value=7.3e-05 Score=67.80 Aligned_cols=69 Identities=23% Similarity=0.212 Sum_probs=64.7
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG-VNVNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g-~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
+.++|++|..|||++ +.|+..|+.+.+.+|+.+| +.+...|..|.+++.+|=..|+.++++.|.++-.+
T Consensus 2 e~~in~rD~fgWTal--------mcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 2 EGNINARDAFGWTAL--------MCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CCCccchhhhcchHH--------HHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 578999999999999 9999999999999999999 88999999999999999999999999999987443
No 128
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.67 E-value=0.00011 Score=76.58 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=83.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN--VNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~--in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
.|.++-.++.+..+-| |+|+.-|+-+++++++.+|.. +++.|+.|.|+||-|+..++..++.+|++.|+.
T Consensus 888 ~gg~ll~~~~~~~sll--------h~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagas 959 (1004)
T KOG0782|consen 888 NGGSLLIQGPDHCSLL--------HYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGAS 959 (1004)
T ss_pred cCCceEeeCcchhhHH--------HHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchh
Confidence 3566666666666666 999999999999999999976 788899999999999999999999999999999
Q ss_pred cCcccCCCCcHHHHHh---hHHHHHHHHh
Q 007317 92 CSEHTFDGDRCHYAAL---NLKVRKLLKA 117 (608)
Q Consensus 92 ~~~~d~~g~~~~~aa~---~~~~~~~L~~ 117 (608)
....|..|.||..-+. ..++..+|-+
T Consensus 960 l~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 960 LRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred heecccCCCChHHHHHhcCCchHHHHHhh
Confidence 9999999999877666 6777777654
No 129
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.62 E-value=4.2e-05 Score=78.23 Aligned_cols=69 Identities=25% Similarity=0.491 Sum_probs=64.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 007317 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESG 89 (608)
Q Consensus 13 ~~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~-~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 89 (608)
+.|.|++.+|.+.+|.| |.||..|+++++++|+. .+.+++.+|.||+|||--|...+|.+++++|-+.-
T Consensus 527 l~g~D~~~~DyD~RTaL--------HvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 527 LQGMDLETKDYDDRTAL--------HVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ 596 (622)
T ss_pred Hhcccccccccccchhh--------eeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence 35889999999999999 99999999999999998 78999999999999999999999999999987653
No 130
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.61 E-value=8.3e-05 Score=77.80 Aligned_cols=65 Identities=31% Similarity=0.395 Sum_probs=61.4
Q ss_pred CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 21 ~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
-+.+|.|+| |.||..|++.+.+.|+=+|+|+-.+|..|+|+|.||-..|..+|+..|+.+|+..+
T Consensus 657 ~~~~grt~L--------HLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 657 GEGDGRTAL--------HLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred cCCCCcchh--------hhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 466789999 99999999999999999999999999999999999999999999999999998755
No 131
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.56 E-value=0.00014 Score=75.90 Aligned_cols=70 Identities=31% Similarity=0.287 Sum_probs=46.2
Q ss_pred hHhhhcCCHHHHHHHHH--cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh
Q 007317 38 FEASRAGDVDRLRYILE--SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL 107 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~--~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~ 107 (608)
|+++.....+-+...+. .+..++.+|..|+||||+|+..|+.+.++.|+.+|+++.++|.+|++ +|.++.
T Consensus 25 h~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 25 HWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred chhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 77666666555544332 34456667777777777777777777777777777777777777775 455555
No 132
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.43 E-value=0.00027 Score=72.75 Aligned_cols=65 Identities=23% Similarity=0.288 Sum_probs=59.7
Q ss_pred CCCCCCC-CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 007317 15 EIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLE 87 (608)
Q Consensus 15 ~~~l~~~-d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 87 (608)
|++.|.. .+.|.||| |.|++.|+..-+++|+=+|+|++.+|.+|+||+.+|-..||-+..+.|++
T Consensus 156 GA~~N~~hpekg~TpL--------HvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 156 GAQANFFHPEKGNTPL--------HVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred ccccCCCCcccCCchh--------HHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 8888885 67899999 99999999999999999999999999999999999999999988777654
No 133
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.39 E-value=0.0005 Score=71.82 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=52.2
Q ss_pred CchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007317 33 PNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (608)
Q Consensus 33 ~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 88 (608)
+++.||.|+.-||...++.|+..|+++..+|..||+|||-|+..|+..++..++.+
T Consensus 55 g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 55 GRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred CCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 47789999999999999999999999999999999999999999999998888753
No 134
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.18 E-value=0.00023 Score=72.70 Aligned_cols=132 Identities=20% Similarity=0.157 Sum_probs=105.0
Q ss_pred CeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcccccchhh
Q 007317 351 KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQVCCNSVTW 430 (608)
Q Consensus 351 ~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~~~~~~~~ 430 (608)
+..+.+|+.+++++++.|+.|+.. +. .......+.+.+.++..++.+..|.|+..-. ....
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~--d~-------~~~~~~~~~~~d~~~~~~~~~~~F~~~~s~~-~~~~--------- 169 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKS--DV-------FKESSKLITLLEEKPEVLEALNGFQVLPSQV-SSVE--------- 169 (297)
T ss_pred CcEEEcCceEEEeeecceeeeccc--cc-------chhccccccccccchhhHhhhceEEEeccch-HHHH---------
Confidence 566999999999999999999987 22 2223344578889999999999999986542 1112
Q ss_pred HhhhcCCCCCCCCchHHH---HHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 007317 431 LVALGSNLPNFVPFDEQA---EEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCLEVIA 507 (608)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~---~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~I~ 507 (608)
.. ..++.+|.+++...|+..|...+...+ ...++...+..+..+....+...|..++.
T Consensus 170 ----------------~~~~~~~~~a~~f~~~~~~lk~~~~~~l~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 230 (297)
T KOG1987|consen 170 ----------------RIFEKHPDLAAAFKYKNRHLKLACMPVLLSLI---ETLNVSQSLQEASNYDLKEAKSALTYVIA 230 (297)
T ss_pred ----------------HhhcCChhhhhccccccHHHHHHHHHHHHHHH---HhhhhcccHHHhchhHHHHHHHHHHHHHh
Confidence 23 377889999999999999999999988 57777888889999999999999999999
Q ss_pred H--hHHHhhcchhHH
Q 007317 508 C--NFETFADSREFR 520 (608)
Q Consensus 508 ~--n~~~v~~~~~f~ 520 (608)
. ++..+....++.
T Consensus 231 ~~~~ld~l~~~~~~~ 245 (297)
T KOG1987|consen 231 AGFKLDWLEKKLNEV 245 (297)
T ss_pred ccchHhHHHHHHHHH
Confidence 7 777776544443
No 135
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.05 E-value=0.00054 Score=77.65 Aligned_cols=76 Identities=29% Similarity=0.281 Sum_probs=68.4
Q ss_pred CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH
Q 007317 23 FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC 102 (608)
Q Consensus 23 ~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~ 102 (608)
..|.|+| |.|+..|..-..+.|+++|+++|..|..|+||+|.+...|+...+..++.+|++.++.+.+|..+
T Consensus 654 ~~~~s~l--------h~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~ 725 (785)
T KOG0521|consen 654 CIGCSLL--------HVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLP 725 (785)
T ss_pred hcccchh--------hhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcch
Confidence 4568888 99999999999999999999999999999999999999999999999999999999999999875
Q ss_pred HHHH
Q 007317 103 HYAA 106 (608)
Q Consensus 103 ~~aa 106 (608)
+..+
T Consensus 726 l~~a 729 (785)
T KOG0521|consen 726 LDIA 729 (785)
T ss_pred hhHH
Confidence 4444
No 136
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=97.00 E-value=0.0012 Score=54.84 Aligned_cols=89 Identities=25% Similarity=0.219 Sum_probs=63.7
Q ss_pred EEEEeCCeEEeehHHHHh-hccHHHHHHHccc-cccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc-CCCCCCC-C
Q 007317 345 VCVRVDKKIFRCHQVVLA-SRSEYFKARLSRM-KDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDID-P 420 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLa-arS~yF~~~~~~~-~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt-~~~~~~~-~ 420 (608)
|.|.|+|+.|.+-+..|. ....+|..|+.+. ..+.. .....+-++ =++..|+.||+|+.+ +.+. .+ .
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~-------~~~~~~fiD-Rdp~~F~~IL~ylr~~~~l~-~~~~ 71 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYD-------DDDGEYFID-RDPELFEYILNYLRTGGKLP-IPDE 71 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEE-------TTTTEEEES-S-HHHHHHHHHHHHHTSSB----TT
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccC-------CccceEEec-cChhhhhHHHHHHhhcCccC-CCCc
Confidence 678999999999999998 5567999999862 11111 233556554 699999999999999 5654 33 2
Q ss_pred CcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhH-HHHH
Q 007317 421 DQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPL-KRAV 467 (608)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L-~~~c 467 (608)
. ....++.-|.+|+++.| ...|
T Consensus 72 ~-------------------------~~~~l~~Ea~fy~l~~l~i~~c 94 (94)
T PF02214_consen 72 I-------------------------CLEELLEEAEFYGLDELFIEDC 94 (94)
T ss_dssp S--------------------------HHHHHHHHHHHT-HHHHBHHC
T ss_pred h-------------------------hHHHHHHHHHHcCCCccccCCC
Confidence 3 77889999999999998 6655
No 137
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=97.00 E-value=0.0043 Score=49.73 Aligned_cols=87 Identities=28% Similarity=0.259 Sum_probs=61.8
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHH-----hcCCCCCC
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYM-----YTDGLKDI 418 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yi-----Yt~~~~~~ 418 (608)
|.++- +|.+|-.-|-+ |.-|.-.|+||+++..+++. ..++|.+.+++..+++.+..|+ |++.-.+
T Consensus 19 VkLvS~Ddhefiikre~-AmtSgTiraml~gpg~~se~-------~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~e- 89 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKREH-AMTSGTIRAMLSGPGVFSEA-------EKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTE- 89 (112)
T ss_pred eEeecCCCcEEEEeehh-hhhhhHHHHHHcCCcccccc-------ccceEEeccchHHHHHHHHHHhhheeeecccccc-
Confidence 55554 55666665554 57799999999986666554 3478999999999999999987 3333111
Q ss_pred CCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccC
Q 007317 419 DPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYL 459 (608)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~ 459 (608)
.++|.=+.+.+++||.+|++|.
T Consensus 90 -------------------iPeF~IppemaleLL~aAn~Le 111 (112)
T KOG3473|consen 90 -------------------IPEFDIPPEMALELLMAANYLE 111 (112)
T ss_pred -------------------CCCCCCCHHHHHHHHHHhhhhc
Confidence 2233334459999999999875
No 138
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=96.74 E-value=0.0027 Score=63.32 Aligned_cols=90 Identities=18% Similarity=0.259 Sum_probs=72.9
Q ss_pred eEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC-CCCHHHHHHHHHHHhcCCCCCCCCCcccccchhh
Q 007317 352 KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFEKMIEYMYTDGLKDIDPDQVCCNSVTW 430 (608)
Q Consensus 352 ~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~~~~~~~~~ll~yiYt~~~~~~~~~~~~~~~~~~ 430 (608)
+.|.|.+.+|...-.||+..+.. ...++ .....|+|. +-+-.+|+=+++|+...... ++..
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~--~~~~~------~~~~~idisVhCDv~iF~WLm~yv~~~~p~-l~~~--------- 75 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSR--YINDS------QRWEEIDISVHCDVHIFEWLMRYVKGEPPS-LTPS--------- 75 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhh--ccccc------CcCCCcceEEecChhHHHHHHHHhhcCCCc-CCcC---------
Confidence 67999999999999999999954 11111 122345554 46789999999999996664 8888
Q ss_pred HhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 431 LVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
||+.++.-|++|+|+.|...|-.|+.+++
T Consensus 76 ----------------NvvsIliSS~FL~M~~Lve~cl~y~~~~~ 104 (317)
T PF11822_consen 76 ----------------NVVSILISSEFLQMESLVEECLQYCHDHM 104 (317)
T ss_pred ----------------cEEEeEehhhhhccHHHHHHHHHHHHHhH
Confidence 99999999999999999999999998776
No 139
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.60 E-value=0.0013 Score=74.35 Aligned_cols=55 Identities=22% Similarity=0.193 Sum_probs=33.2
Q ss_pred hHhhhcCCHHHHHHHHH-cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 38 FEASRAGDVDRLRYILE-SGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~-~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|. |..++++++-.++. .|..++.+|.+||||||||+..|+..++..|.+.|++..
T Consensus 613 hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 613 HF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPG 668 (975)
T ss_pred hH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccc
Confidence 55 44455554444433 666666777777777777777777776666666555533
No 140
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=96.59 E-value=0.012 Score=49.75 Aligned_cols=98 Identities=15% Similarity=0.076 Sum_probs=63.4
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc-
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ- 422 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~- 422 (608)
|+|+. +|..|.+.+.+. ..|..++.|+.+.+ ........|.+++++..+++.|++|++...-.+.....
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~--------~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~h~~~~~~~~~~ 74 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLG--------VDDENNNPIPLPNVTSKILSKVIEYCEHHVDDPPSVADK 74 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccC--------cccCCCCCccCCCcCHHHHHHHHHHHHHcccCCCCcccc
Confidence 55554 788999999987 79999999998621 11112258999999999999999999865432111110
Q ss_pred -ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCc
Q 007317 423 -VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (608)
Q Consensus 423 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l 460 (608)
....-....+. -..+.+.+|+.||++|++
T Consensus 75 ~~~~~wD~~F~~---------~d~~~l~dLl~AAnyL~I 104 (104)
T smart00512 75 DDIPTWDAEFLK---------IDQETLFELILAANYLDI 104 (104)
T ss_pred ccccHHHHHHHc---------CCHHHHHHHHHHHHhhCC
Confidence 00000001110 113489999999999975
No 141
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=96.01 E-value=0.073 Score=48.40 Aligned_cols=123 Identities=16% Similarity=0.196 Sum_probs=81.6
Q ss_pred CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCC--CCCCc-ccc-
Q 007317 350 DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKD--IDPDQ-VCC- 425 (608)
Q Consensus 350 ~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~--~~~~~-~~~- 425 (608)
+|+.|.+-..+. ..|..+++++... +..... ..|.++.|+..+|..|+.|++.-+-.+ ..... .+-
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~--------~~~~~~-~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~ 82 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIED--------GCADEN-DPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEE 82 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHc--------CCCccC-CccccCccCHHHHHHHHHHHHHccccccccccccccccc
Confidence 778888887776 8888999998751 111111 479999999999999999999844321 10100 000
Q ss_pred cc-hhhHhhhcCCCCCCCCc-hHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHH
Q 007317 426 NS-VTWLVALGSNLPNFVPF-DEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLIL 489 (608)
Q Consensus 426 ~~-~~~~~~~~~~~~~~~~~-~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~ 489 (608)
.+ -.|= .+|... ...+.+++.||++|.+++|..+|++.+...+.+.|++..-..+.+
T Consensus 83 ~~i~~WD-------~~Flk~d~~tLfdli~AAnyLdi~gLl~~~ck~va~mikgktpeEir~~f~I 141 (162)
T KOG1724|consen 83 TDIPEWD-------AEFLKVDQGTLFDLILAANYLDIKGLLDLTCKTVANMIKGKTPEEIREIFNI 141 (162)
T ss_pred CCccHHH-------HHHHhcCHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHccCCHHHHHHHcCC
Confidence 00 0000 001111 138899999999999999999999999988876677766555433
No 142
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.83 E-value=0.016 Score=60.35 Aligned_cols=72 Identities=24% Similarity=0.205 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCCCCCC------CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcHHHHHhhHHHHHHHHh
Q 007317 46 VDRLRYILESGVNVNAR------DQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKA 117 (608)
Q Consensus 46 ~~~~~~Ll~~g~~in~~------d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~~~aa~~~~~~~~L~~ 117 (608)
...+++|.+++.+.|.+ +-...|+||+|+..|...++.++|+.|+|+-..|..|.||...+.+.++...++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~a 481 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFIA 481 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHHH
Confidence 46677888888777654 3346799999999999999999999999999999999998777667777666653
No 143
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.71 E-value=0.019 Score=34.71 Aligned_cols=29 Identities=28% Similarity=0.376 Sum_probs=24.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 65 WDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 65 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|.||+|+|+..|+.+++++|+.+|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 37789999999999999999998887654
No 144
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=95.53 E-value=0.039 Score=51.62 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=70.8
Q ss_pred CcEEEEeCCeEEeehHHHHhhccH--HHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCC
Q 007317 343 ADVCVRVDKKIFRCHQVVLASRSE--YFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDP 420 (608)
Q Consensus 343 ~Dv~l~~~~~~~~~Hr~iLaarS~--yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~ 420 (608)
+=|.+-++|+.|-.-.--|.-|-| ...+||.+.. | ...++...-+-|+ =+|..|+.+|.|+..|.+...+.
T Consensus 9 ~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g-~-----~~~~d~kGa~lID-Rsp~yFepIlNyLr~Gq~~~~s~ 81 (302)
T KOG1665|consen 9 SMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRG-A-----MCQEDKKGAVLID-RSPKYFEPILNYLRDGQIPSLSD 81 (302)
T ss_pred hhheeecCCeEEEEeehhhcccCchHHHHHHHccCC-C-----ccccccCceEEEc-cCchhhHHHHHHHhcCceeecCC
Confidence 347778888888766665555543 6788998743 3 2223334444444 58999999999999999964444
Q ss_pred CcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHH
Q 007317 421 DQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVAD 469 (608)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~ 469 (608)
. ++..+++.|++|++-+|+...++
T Consensus 82 i-------------------------~~lgvLeeArff~i~sL~~hle~ 105 (302)
T KOG1665|consen 82 I-------------------------DCLGVLEEARFFQILSLKDHLED 105 (302)
T ss_pred c-------------------------cHHHHHHHhhHHhhHhHHhHHhh
Confidence 4 89999999999999999999887
No 145
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.51 E-value=0.017 Score=64.21 Aligned_cols=103 Identities=23% Similarity=0.251 Sum_probs=80.0
Q ss_pred hhhhHhhhcCCHHHHHHHHHc--C--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcHHHHHh--h
Q 007317 35 GDVFEASRAGDVDRLRYILES--G--VNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAAL--N 108 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~--g--~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~~~aa~--~ 108 (608)
..+..|++.|++..++..++. . .++|++|.-|+++|++|..+-+.++.++|++++... |..+.++.. .
T Consensus 27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------gdALL~aI~~~~ 100 (822)
T KOG3609|consen 27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------GDALLLAIAVGS 100 (822)
T ss_pred HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc------chHHHHHHHHHH
Confidence 345689999999999998872 2 578999999999999999999999999999887664 555555544 7
Q ss_pred HHHHHHHHhhcCCCC--------CCCCcccccccccccccccc
Q 007317 109 LKVRKLLKAYEARPP--------PLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 109 ~~~~~~L~~~~~~~~--------~~~~~~~g~t~l~lac~~~~ 143 (608)
...+++++.+..... .....+.+.||+.+||..|+
T Consensus 101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nn 143 (822)
T KOG3609|consen 101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNN 143 (822)
T ss_pred HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcc
Confidence 778888888764321 11245678999999998666
No 146
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=95.35 E-value=0.091 Score=39.67 Aligned_cols=56 Identities=21% Similarity=0.233 Sum_probs=43.4
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT 412 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt 412 (608)
|+|+. ||+.|.+.+.+. ..|..++.|+.+. +. .. ..|.+++++..+++.+++|++.
T Consensus 3 v~L~SsDg~~f~V~~~~a-~~S~~i~~ml~~~--------~~--~~-~~Ipl~~v~~~~L~kViewc~~ 59 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAA-KQSKTIKNMLEDL--------GD--ED-EPIPLPNVSSRILKKVIEWCEH 59 (62)
T ss_dssp EEEEETTSEEEEEEHHHH-TTSHHHHHHHHCT--------CC--CG-TEEEETTS-HHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHH-HHhHHHHHHHhhh--------cc--cc-cccccCccCHHHHHHHHHHHHh
Confidence 44554 789999999987 6999999999861 11 11 1799999999999999999873
No 147
>PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ]. They are important in shaping the action potential, and in neuronal excitability and plasticity []. The potassium channel family is composed of several functionally distinct isoforms, which can be broadly separated into 2 groups []: the practically non-inactivating 'delayed' group and the rapidly inactivating 'transient' group. These are all highly similar proteins, with only small amino acid changes causing the diversity of the voltage-dependent gating mechanism, channel conductance and toxin binding properties. Each type of K+ channel is activated by different signals and conditions depending on their type of regulation: some open in response to depolarisation of the plasma membrane; others in response to hyperpolarisation or an increase in intracellular calcium concentration; some can be regulated by binding of a transmitter, together with intracellular kinases; while others are regulated by GTP-binding proteins or other second messengers []. In eukaryotic cells, K+ channels are involved in neural signalling and generation of the cardiac rhythm, act as effectors in signal transduction pathways involving G protein-coupled receptors (GPCRs) and may have a role in target cell lysis by cytotoxic T-lymphocytes []. In prokaryotic cells, they play a role in the maintenance of ionic homeostasis []. All K+ channels discovered so far possess a core of alpha subunits, each comprising either one or two copies of a highly conserved pore loop domain (P-domain). The P-domain contains the sequence (T/SxxTxGxG), which has been termed the K+ selectivity sequence. In families that contain one P-domain, four subunits assemble to form a selective pathway for K+ across the membrane. However, it remains unclear how the 2 P-domain subunits assemble to form a selective pore. The functional diversity of these families can arise through homo- or hetero-associations of alpha subunits or association with auxiliary cytoplasmic beta subunits. K+ channel subunits containing one pore domain can be assigned into one of two superfamilies: those that possess six transmembrane (TM) domains and those that possess only two TM domains. The six TM domain superfamily can be further subdivided into conserved gene families: the voltage-gated (Kv) channels; the KCNQ channels (originally known as KvLQT channels); the EAG-like K+ channels; and three types of calcium (Ca)-activated K+ channels (BK, IK and SK) []. The 2TM domain family comprises inward-rectifying K+ channels. In addition, there are K+ channel alpha-subunits that possess two P-domains. These are usually highly regulated K+ selective leak channels. The Kv family can be divided into several subfamilies on the basis of sequence similarity and function. Four of these subfamilies, Kv1 (Shaker), Kv2 (Shab), Kv3 (Shaw) and Kv4 (Shal), consist of pore-forming alpha subunits that associate with different types of beta subunit. Each alpha subunit comprises six hydrophobic TM domains with a P-domain between the fifth and sixth, which partially resides in the membrane. The fourth TM domain has positively charged residues at every third residue and acts as a voltage sensor, which triggers the conformational change that opens the channel pore in response to a displacement in membrane potential []. More recently, 4 new electrically-silent alpha subunits have been cloned: Kv5 (KCNF), Kv6 (KCNG), Kv8 and Kv9 (KCNS). These subunits do not themselves possess any functional activity, but appear to form heteromeric channels with Kv2 subunits, and thus modulate Shab channel activity []. When highly expressed, they inhibit channel activity, but at lower levels show more specific modulatory actions. The N-terminal, cytoplasmic tetramerization domain (T1) of voltage-gated potassium channels encodes molecular determinants for subfamily-specific assembly of alpha-subunits into functional tetrameric channels []. This domain is found in a subset of a larger group of proteins that contain the BTB/POZ domain.; GO: 0005249 voltage-gated potassium channel activity, 0006813 potassium ion transport, 0008076 voltage-gated potassium channel complex, 0016020 membrane; PDB: 1NN7_A 3KVT_A 1EXB_E 1QDV_A 1DSX_E 1QDW_F 3LUT_B 3LNM_B 2A79_B 3DRY_C ....
Probab=95.24 E-value=0.056 Score=44.63 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=54.3
Q ss_pred eeEEecCeeeehhhhhHh-ccCHHHHHhcccc---cCcCcccEEEcCCCCHHHHHHHHHHHhc-CccccC-hhhHHHHHH
Q 007317 173 VVFYVQGRPIEAHRVILS-ARSVFFRRKFETD---WRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIA-VDDMEDLVK 246 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~-arS~~F~~lf~~~---~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~-~~~~~~ll~ 246 (608)
|.+.|||+.|.+-+..|. ....+|..++.+. ........+-+ +-+|..|+.+|+|+-+ +.+..+ ...+..+++
T Consensus 1 V~lNVGG~~f~~~~~tL~~~~~s~l~~~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylr~~~~l~~~~~~~~~~l~~ 79 (94)
T PF02214_consen 1 VRLNVGGTIFETSRSTLTRYPDSLLARLFSGERSDDYDDDDGEYFI-DRDPELFEYILNYLRTGGKLPIPDEICLEELLE 79 (94)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTSHHHTGHGGGEETTTTEEEE-SS-HHHHHHHHHHHHHTSSB---TTS-HHHHHH
T ss_pred CEEEECCEEEEEcHHHHhhCCCChhhhHHhhccccccCCccceEEe-ccChhhhhHHHHHHhhcCccCCCCchhHHHHHH
Confidence 578899999999999998 5566888888754 22334445555 5799999999999999 666553 334555555
Q ss_pred HHhHhcHH
Q 007317 247 ICKVCKCE 254 (608)
Q Consensus 247 ~A~~c~~~ 254 (608)
-|+.+++.
T Consensus 80 Ea~fy~l~ 87 (94)
T PF02214_consen 80 EAEFYGLD 87 (94)
T ss_dssp HHHHHT-H
T ss_pred HHHHcCCC
Confidence 55555433
No 148
>KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism]
Probab=95.11 E-value=0.12 Score=49.54 Aligned_cols=88 Identities=15% Similarity=0.236 Sum_probs=63.4
Q ss_pred eeEEecCeeeehhhhhHhccCHHHHHhcccccCc--CcccEEEcCCCCHHHHHHHHHHHhcCccccCh--hhHHHHHHHH
Q 007317 173 VVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY--RNEIRFSREKLSYPALYGLIHFFYSDRLEIAV--DDMEDLVKIC 248 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e--~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~--~~~~~ll~~A 248 (608)
|.+-|||+.|.-++.-|.--..+|+.|+..++.- .....|-+ +=+|.-|..+|+||=.|.+.++. ..+.+|+.=|
T Consensus 7 vkLnvGG~~F~Tsk~TLtk~dg~fk~m~e~~i~~~~d~s~~IFI-DRSpKHF~~ILNfmRdGdv~LPe~~kel~El~~EA 85 (230)
T KOG2716|consen 7 VKLNVGGTIFKTSKSTLTKFDGFFKTMLETDIPVEKDESGCIFI-DRSPKHFDTILNFMRDGDVDLPESEKELKELLREA 85 (230)
T ss_pred EEEecCCeEEEeehhhhhhhhhHHHHHhhcCCccccCCcCcEEe-cCChhHHHHHHHhhhcccccCccchHHHHHHHHHH
Confidence 4567899999999999999999999999887632 22233444 67999999999999988876543 3455665555
Q ss_pred hHhcHHHHHHHHH
Q 007317 249 KVCKCESLQRIIE 261 (608)
Q Consensus 249 ~~c~~~~L~~~l~ 261 (608)
+.+.++.|.+.|+
T Consensus 86 ~fYlL~~Lv~~C~ 98 (230)
T KOG2716|consen 86 EFYLLDGLVELCQ 98 (230)
T ss_pred HHhhHHHHHHHHH
Confidence 5554444444443
No 149
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=94.94 E-value=0.11 Score=53.56 Aligned_cols=93 Identities=24% Similarity=0.269 Sum_probs=68.9
Q ss_pred EEEEeCCeEEeehHHHHhhcc--HHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 345 VCVRVDKKIFRCHQVVLASRS--EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLaarS--~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
|.|-|+|+.|.-.+.-|+... .||.+++.+ +|+..+. ....|-| |=+|+.|..+|+|+.|++++ ++.-
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~--~~~s~~~-----~~~~iFI-DRDPdlFaviLn~LRTg~L~-~~g~- 82 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSG--RINSLKD-----ESGAIFI-DRDPDLFAVILNLLRTGDLD-ASGV- 82 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcC--ccccccC-----CCCceEe-cCCchHHHHHHHHHhcCCCC-CccC-
Confidence 778899999999999887665 699999988 6665432 1122333 45899999999999999996 6544
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHH-HhhccCchhHHH---HHHHHH
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFD-AASRYLLFPLKR---AVADVL 471 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~A~~l~l~~L~~---~c~~~l 471 (608)
....++. -|.+|++..|.+ .|+.-+
T Consensus 83 ------------------------~~~~llhdEA~fYGl~~llrrl~~~~~~F 111 (465)
T KOG2714|consen 83 ------------------------FPERLLHDEAMFYGLTPLLRRLTLCEELF 111 (465)
T ss_pred ------------------------chhhhhhhhhhhcCcHHHHHHhhcCcccc
Confidence 3444444 899999999876 555543
No 150
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=94.59 E-value=0.035 Score=63.32 Aligned_cols=86 Identities=21% Similarity=0.080 Sum_probs=70.6
Q ss_pred HcCCCCCCC--CCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCc
Q 007317 54 ESGVNVNAR--DQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPL 128 (608)
Q Consensus 54 ~~g~~in~~--d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~ 128 (608)
..|+.+|.. -..|.|+||.|+..|...++++|+.+|++++..|..|.+| |.+.. +......+...|+++.. .+
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a--~~ 719 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA--FD 719 (785)
T ss_pred cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc--cC
Confidence 345555543 3468999999999999999999999999999999999974 55554 77788888888998877 78
Q ss_pred ccccccccccccc
Q 007317 129 QAALRDTFLGCGA 141 (608)
Q Consensus 129 ~~g~t~l~lac~~ 141 (608)
..|++|+..|...
T Consensus 720 ~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 720 PDGKLPLDIAMEA 732 (785)
T ss_pred ccCcchhhHHhhh
Confidence 8999999887654
No 151
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=94.19 E-value=0.054 Score=32.52 Aligned_cols=29 Identities=24% Similarity=0.623 Sum_probs=25.3
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCC
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVN 60 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in 60 (608)
.|.||+ |+|+..|+.++++.|++.|.+++
T Consensus 1 ~~~~~l--------~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPL--------HLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHH--------HHHHHcCCHHHHHHHHHcCCCCC
Confidence 367888 99999999999999999988764
No 152
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=93.99 E-value=0.079 Score=60.42 Aligned_cols=68 Identities=24% Similarity=0.227 Sum_probs=56.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007317 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN------VNARDQWDSVALYYACLAGHLDAARMLL 86 (608)
Q Consensus 13 ~~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~------in~~d~~g~tpLh~A~~~g~~~~v~~Ll 86 (608)
.+|..++.+|..||||| |||+..|+..++..|+.-|++ ++.....|.|+--.|...|+..+.-+|-
T Consensus 629 ~~~~ai~i~D~~G~tpL--------~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~ls 700 (975)
T KOG0520|consen 629 ADGVAIDIRDRNGWTPL--------HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLS 700 (975)
T ss_pred ecccccccccCCCCccc--------chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHh
Confidence 46899999999999999 999999999999999976654 3444567899998888889988888776
Q ss_pred hc
Q 007317 87 ES 88 (608)
Q Consensus 87 ~~ 88 (608)
+.
T Consensus 701 e~ 702 (975)
T KOG0520|consen 701 EK 702 (975)
T ss_pred hh
Confidence 54
No 153
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=93.77 E-value=1.2 Score=38.13 Aligned_cols=123 Identities=22% Similarity=0.197 Sum_probs=81.9
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|.+.. +|..|.+.+.+ |-||-..++|+... . . ..-.|..+.++..+|..++.|+-..+-+ .+++..
T Consensus 4 i~l~s~dge~F~vd~~i-AerSiLikN~l~d~---~-------~-~n~p~p~pnVrSsvl~kv~ew~ehh~~s-~sede~ 70 (158)
T COG5201 4 IELESIDGEIFRVDENI-AERSILIKNMLCDS---T-------A-CNYPIPAPNVRSSVLMKVQEWMEHHTSS-LSEDEN 70 (158)
T ss_pred eEEEecCCcEEEehHHH-HHHHHHHHHHhccc---c-------c-cCCCCcccchhHHHHHHHHHHHHhcccc-CCCccC
Confidence 45554 77778887665 58999999999741 1 1 1223677889999999999999876554 444320
Q ss_pred c------ccchhhHhhhcCCCCCCCCch-HHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHH
Q 007317 424 C------CNSVTWLVALGSNLPNFVPFD-EQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWL 487 (608)
Q Consensus 424 ~------~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l 487 (608)
. -.++.|-. .|...+ +.+.++..+|++|.++.|...|+..+...+.+-+++..-..+
T Consensus 71 d~~~rks~p~D~wdr-------~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivaemirgkSpeeir~tf 134 (158)
T COG5201 71 DLEIRKSKPSDFWDR-------FFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAEMIRGKSPEEIRETF 134 (158)
T ss_pred hHhhhccCCccHHHH-------HHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHHHHccCCHHHHHHHh
Confidence 0 01222200 000111 367889999999999999999999999988766777554433
No 154
>PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a POZ domain with a core structure consisting of beta(2)/alpha(2)/beta(2)/alpha(2) in two layers, alpha/beta. This domain is found at the N-terminal of SKP1 proteins [] as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. ; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 1LM8_C 2XAI_E 1VCB_E 3ZRC_K 3ZRF_E 3DCG_B 2C9W_C 1LQB_B 2IZV_C 1HV2_A ....
Probab=93.35 E-value=0.31 Score=36.76 Aligned_cols=55 Identities=18% Similarity=0.150 Sum_probs=41.8
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHh
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFY 230 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylY 230 (608)
++++. +|..|.+.+.+.. .|..++.|+.+...+ .. .|++++|+...++.+++|++
T Consensus 3 v~L~SsDg~~f~V~~~~a~-~S~~i~~ml~~~~~~-~~-~Ipl~~v~~~~L~kViewc~ 58 (62)
T PF03931_consen 3 VKLVSSDGQEFEVSREAAK-QSKTIKNMLEDLGDE-DE-PIPLPNVSSRILKKVIEWCE 58 (62)
T ss_dssp EEEEETTSEEEEEEHHHHT-TSHHHHHHHHCTCCC-GT-EEEETTS-HHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEeeHHHHH-HhHHHHHHHhhhccc-cc-ccccCccCHHHHHHHHHHHH
Confidence 34554 7788999887764 899999999753222 22 79999999999999999997
No 155
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=93.24 E-value=0.22 Score=39.56 Aligned_cols=49 Identities=12% Similarity=0.111 Sum_probs=39.4
Q ss_pred HHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCc
Q 007317 447 QAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGV 495 (608)
Q Consensus 447 ~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~ 495 (608)
.+.+|+.+|++|+|+.|...|+..+...+.+.|++.+-.++.+...+..
T Consensus 15 ~L~~l~~AA~yL~I~~L~~~~~~~iA~~i~gks~eeir~~fgi~~d~t~ 63 (78)
T PF01466_consen 15 ELFDLLNAANYLDIKGLLDLCCKYIANMIKGKSPEEIRKYFGIENDLTP 63 (78)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHHHHHHTTS-HHHHHHHHT---TSSH
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHhcCCCHHHHHHHcCCCCCCCH
Confidence 8999999999999999999999999999987888888888877766554
No 156
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.89 E-value=0.19 Score=56.22 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=48.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCC----------------------------------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNV---------------------------------- 59 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~i---------------------------------- 59 (608)
...++|+.|-=|+++| +.|..+.|.++.+.|++++...
T Consensus 51 ~~lninc~d~lGr~al--------~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d 122 (822)
T KOG3609|consen 51 SKLNINCRDPLGRLAL--------HIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGD 122 (822)
T ss_pred cccchhccChHhhhce--------ecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccc
Confidence 4578888999999998 7777777777777666654322
Q ss_pred --CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCC
Q 007317 60 --NARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (608)
Q Consensus 60 --n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 98 (608)
...-.-+.||+.+||..++.+++++|+.+|+.+...+..
T Consensus 123 ~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH~~ 163 (822)
T KOG3609|consen 123 ANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPHDI 163 (822)
T ss_pred cCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCccc
Confidence 011123456666666666666666666666665554443
No 157
>KOG1778 consensus CREB binding protein/P300 and related TAZ Zn-finger proteins [Transcription]
Probab=90.63 E-value=0.12 Score=52.32 Aligned_cols=145 Identities=15% Similarity=0.136 Sum_probs=111.5
Q ss_pred cEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|.++......+++|+.+|...|+.|..+... . ...+....+.+-.++...+..+.+++|.. +. --+.
T Consensus 28 ~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~c~~~~~~~~~l~~~-~e-k~e~-- 94 (319)
T KOG1778|consen 28 VEIVTDVKDLIPAHSLVLGPASPVFKKVLKQ--P-------CRKSLVKGNKILGVPCKAVNVFIRFLYSS-LE-KHEM-- 94 (319)
T ss_pred hhhhhhhhhhhHHHHhcccccchHHHHHHhh--h-------cchhhhhcceeecccccccchhhhhhccc-hh-hhHH--
Confidence 3444446677999999999999999988876 1 11123345666777889999999999987 32 2111
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCchHHHHHHH
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFKVREYCL 503 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~L~~~c~ 503 (608)
....+.++.+...+.++..+..|...+..-+ .+..+++.++..+..|....|...+.
T Consensus 95 ---------------------~~~~ihll~~~~~~~v~~~~~d~~~~~~~~~--~~~r~~flvl~~~~~~~~~~lr~a~h 151 (319)
T KOG1778|consen 95 ---------------------VFFDIHLLALSHVYVVPQPKADCDPILECGL--FDKRNVFLVLQLAEHCDFSDLRRAKH 151 (319)
T ss_pred ---------------------HHHHHHHHhhhhhhhccCccccCCccccchh--hhhHHHHHHHHHHHhcccchHHHHHH
Confidence 1277888888899999999999988887633 26788999999999999999999999
Q ss_pred HHHHHhHHHhhcchhHHHHHh
Q 007317 504 EVIACNFETFADSREFRAMLL 524 (608)
Q Consensus 504 ~~I~~n~~~v~~~~~f~~l~~ 524 (608)
..|...|.....+..+..+..
T Consensus 152 ss~~~~~~~H~~t~~~~~~~c 172 (319)
T KOG1778|consen 152 SSIMLLFDLHLQTEKWFAYTC 172 (319)
T ss_pred HHHHHHHHHHhcccCceeeec
Confidence 999999999888665554433
No 158
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=88.39 E-value=0.34 Score=50.90 Aligned_cols=48 Identities=17% Similarity=0.298 Sum_probs=40.9
Q ss_pred hhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007317 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (608)
Q Consensus 36 ~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll 86 (608)
.||+|+..|.-.++.++|+.|+|+..+|..|.||..+++ +.++-...+
T Consensus 433 ~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 433 FLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred HHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 349999999999999999999999999999999988766 555544444
No 159
>KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription]
Probab=88.17 E-value=2 Score=34.90 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=57.2
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhccccc--CcCcccEEEcCCCCHHHHHHHHHHH-----hcCc------cccCh
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDW--RYRNEIRFSREKLSYPALYGLIHFF-----YSDR------LEIAV 238 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~--~e~~~~~i~l~~v~~~~~~~lL~yl-----Ytg~------~~i~~ 238 (608)
|.++. +|..|-..|. ++.-|.-+++||.+.. .+....++.+++++...++.+.+|+ |++. +++++
T Consensus 19 VkLvS~Ddhefiikre-~AmtSgTiraml~gpg~~se~~~n~v~f~di~shiLeKvc~Yl~Yk~rY~~~s~eiPeF~Ipp 97 (112)
T KOG3473|consen 19 VKLVSSDDHEFIIKRE-HAMTSGTIRAMLSGPGVFSEAEKNEVYFRDIPSHILEKVCEYLAYKVRYTNSSTEIPEFDIPP 97 (112)
T ss_pred eEeecCCCcEEEEeeh-hhhhhhHHHHHHcCCccccccccceEEeccchHHHHHHHHHHhhheeeeccccccCCCCCCCH
Confidence 34444 4455555443 4566889999999754 4566778999999999999999987 5554 46788
Q ss_pred hhHHHHHHHHhHh
Q 007317 239 DDMEDLVKICKVC 251 (608)
Q Consensus 239 ~~~~~ll~~A~~c 251 (608)
+.+.+|+.+|+..
T Consensus 98 emaleLL~aAn~L 110 (112)
T KOG3473|consen 98 EMALELLMAANYL 110 (112)
T ss_pred HHHHHHHHHhhhh
Confidence 8899999888643
No 160
>smart00512 Skp1 Found in Skp1 protein family. Family of Skp1 (kinetochore protein required for cell cycle progression) and elongin C (subunit of RNA polymerase II transcription factor SIII) homologues.
Probab=87.28 E-value=2.3 Score=35.70 Aligned_cols=59 Identities=14% Similarity=0.116 Sum_probs=45.0
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCc-CcccEEEcCCCCHHHHHHHHHHHhcC
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRY-RNEIRFSREKLSYPALYGLIHFFYSD 232 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e-~~~~~i~l~~v~~~~~~~lL~ylYtg 232 (608)
++++. +|..|.+.+.+. ..|..++.|+.+.-.. .....|++++|+..+++.+++|++--
T Consensus 4 v~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~~~~~~Ipl~~v~~~~L~~Vi~yc~~h 64 (104)
T smart00512 4 IKLISSDGEVFEVEREVA-RQSKTIKAMIEDLGVDDENNNPIPLPNVTSKILSKVIEYCEHH 64 (104)
T ss_pred EEEEeCCCCEEEecHHHH-HHHHHHHHHHHccCcccCCCCCccCCCcCHHHHHHHHHHHHHc
Confidence 45554 778899998876 5889999999753221 12257999999999999999999854
No 161
>KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only]
Probab=86.56 E-value=2.5 Score=43.99 Aligned_cols=66 Identities=14% Similarity=0.097 Sum_probs=51.0
Q ss_pred eeEEecCeeeehhhhhHhccC--HHHHHhcccccCcCcccE--EEcCCCCHHHHHHHHHHHhcCccccChh
Q 007317 173 VVFYVQGRPIEAHRVILSARS--VFFRRKFETDWRYRNEIR--FSREKLSYPALYGLIHFFYSDRLEIAVD 239 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~arS--~~F~~lf~~~~~e~~~~~--i~l~~v~~~~~~~lL~ylYtg~~~i~~~ 239 (608)
|.+.|||+.|.-.+.-|+... .+|.+++.+.+....... |-+ +=+|+.|..+|+|+-||++++..-
T Consensus 13 V~lNVGGriF~Ts~qTL~~~~~DSffsaL~s~~~~s~~~~~~~iFI-DRDPdlFaviLn~LRTg~L~~~g~ 82 (465)
T KOG2714|consen 13 VKLNVGGRIFETSAQTLTWIPRDSFFSALLSGRINSLKDESGAIFI-DRDPDLFAVILNLLRTGDLDASGV 82 (465)
T ss_pred EEEecCceEEecchhhhhcCCcchHHHHHhcCccccccCCCCceEe-cCCchHHHHHHHHHhcCCCCCccC
Confidence 567799999999998887766 688888887765433222 333 679999999999999999988543
No 162
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=86.19 E-value=7.4 Score=35.11 Aligned_cols=105 Identities=15% Similarity=0.065 Sum_probs=71.7
Q ss_pred CCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCC
Q 007317 340 DDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDID 419 (608)
Q Consensus 340 ~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~ 419 (608)
+...=|.|-|||..|..-|.-|+.-+.-|-.-|.. .-.+......+.+ -.+-|=+|..|-.||+|+..|++- +.
T Consensus 18 g~s~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q--~~~~l~sdrDetG---AYlIDRDP~~FgpvLNylRhgklv-l~ 91 (210)
T KOG2715|consen 18 GVSLWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQ--REKDLPSDRDETG---AYLIDRDPFYFGPVLNYLRHGKLV-LN 91 (210)
T ss_pred CceEEEEEecCCEEEEeeeeccccCcHHHHHHHHh--cccCCCCCccccC---ceEeccCcchHHHHHHHHhcchhh-hh
Confidence 33345788899999999999997777555555543 1111111111111 223345789999999999999985 54
Q ss_pred CCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 420 PDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
.- .-..+|.-|++|.++.|.++..+.|....
T Consensus 92 ~l-------------------------~eeGvL~EAefyn~~~li~likd~i~dRd 122 (210)
T KOG2715|consen 92 KL-------------------------SEEGVLEEAEFYNDPSLIQLIKDRIQDRD 122 (210)
T ss_pred hh-------------------------hhhccchhhhccCChHHHHHHHHHHHHHh
Confidence 43 33457788999999999999988887765
No 163
>PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised. This family is found in bacteria. This presumed domain is typically between 170 to 303 amino acids in length. The N-terminal half of this family is a BTB-like domain.
Probab=84.42 E-value=1.9 Score=43.52 Aligned_cols=73 Identities=12% Similarity=0.178 Sum_probs=56.1
Q ss_pred eeeehhhhhHhccCHHHHHhccc---ccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHHHhHhcH
Q 007317 180 RPIEAHRVILSARSVFFRRKFET---DWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKICKVCKC 253 (608)
Q Consensus 180 ~~~~~Hk~iL~arS~~F~~lf~~---~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~A~~c~~ 253 (608)
+.|.|.+.+|...-.||+..+.. .-.+..+..|.+ +-+..+|+=+++|+......++++|+..++.-+.+.++
T Consensus 14 rdF~C~~~lL~~~M~YF~~~l~~~~~~~~~~~~idisV-hCDv~iF~WLm~yv~~~~p~l~~~NvvsIliSS~FL~M 89 (317)
T PF11822_consen 14 RDFTCPRDLLVSEMRYFAEYLSRYINDSQRWEEIDISV-HCDVHIFEWLMRYVKGEPPSLTPSNVVSILISSEFLQM 89 (317)
T ss_pred eeeeccHHHHHHhhHHHHHHHhhcccccCcCCCcceEE-ecChhHHHHHHHHhhcCCCcCCcCcEEEeEehhhhhcc
Confidence 67999999999999999999954 323334455554 57889999999999998888888887776666655433
No 164
>KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=83.18 E-value=0.62 Score=47.41 Aligned_cols=110 Identities=15% Similarity=0.024 Sum_probs=68.9
Q ss_pred CeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHH---HHHHHHhHhcHHH
Q 007317 179 GRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDME---DLVKICKVCKCES 255 (608)
Q Consensus 179 ~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~---~ll~~A~~c~~~~ 255 (608)
+..+.+|+.++++++++|+.++..+..+.....+.+.+..+..++++..|.|+..-....+.+. .++..+...+.+.
T Consensus 109 ~g~~~~~~~~~~a~~~V~~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~F~~~~s~~~~~~~~~~~~~~~a~~f~~~~~~ 188 (297)
T KOG1987|consen 109 NGFLVAHKLVLVARSEVFEAMGKSDVFKESSKLITLLEEKPEVLEALNGFQVLPSQVSSVERIFEKHPDLAAAFKYKNRH 188 (297)
T ss_pred CcEEEcCceEEEeeecceeeecccccchhccccccccccchhhHhhhceEEEeccchHHHHHhhcCChhhhhccccccHH
Confidence 4559999999999999999999876655555555777889999999999999965433333222 3333443333333
Q ss_pred HHHHHHH----------HHHHHHHHHHcCCHHHHHHHHHHHHh
Q 007317 256 LQRIIEK----------ELIHQKYAEYKALRDVDNSQKRFILQ 288 (608)
Q Consensus 256 L~~~l~~----------~l~~~~~A~~~~~~~L~~~~~~~i~~ 288 (608)
++..+.+ ....+..+..+....+...+..++..
T Consensus 189 lk~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T KOG1987|consen 189 LKLACMPVLLSLIETLNVSQSLQEASNYDLKEAKSALTYVIAA 231 (297)
T ss_pred HHHHHHHHHHHHHHhhhhcccHHHhchhHHHHHHHHHHHHHhc
Confidence 3333332 12334445555555555555555544
No 165
>KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only]
Probab=82.57 E-value=4.3 Score=38.40 Aligned_cols=90 Identities=12% Similarity=0.087 Sum_probs=65.1
Q ss_pred CCeeEEecCeeeehhhhhHhccCH--HHHHhcccc-c-C-cCcccEEEcCCCCHHHHHHHHHHHhcCccccChh-hHHHH
Q 007317 171 PDVVFYVQGRPIEAHRVILSARSV--FFRRKFETD-W-R-YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDL 244 (608)
Q Consensus 171 ~Dv~~~v~~~~~~~Hk~iL~arS~--~F~~lf~~~-~-~-e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~l 244 (608)
+-|.+.++|+.|---..-|..|-| -+..||.+. + . +..+..+-+ +=+|.-|+.+|.|+-.|+++...+ ++..+
T Consensus 9 ~~vrlnigGk~f~TTidTlv~rEPDSMLa~MF~~~g~~~~~d~kGa~lI-DRsp~yFepIlNyLr~Gq~~~~s~i~~lgv 87 (302)
T KOG1665|consen 9 SMVRLNIGGKKFCTTIDTLVIREPDSMLAAMFSGRGAMCQEDKKGAVLI-DRSPKYFEPILNYLRDGQIPSLSDIDCLGV 87 (302)
T ss_pred hhheeecCCeEEEEeehhhcccCchHHHHHHHccCCCccccccCceEEE-ccCchhhHHHHHHHhcCceeecCCccHHHH
Confidence 467788899888766666666655 577888753 1 2 222333333 678999999999999999876444 78888
Q ss_pred HHHHhHhcHHHHHHHHH
Q 007317 245 VKICKVCKCESLQRIIE 261 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~ 261 (608)
++.|+.+++-.|..+++
T Consensus 88 LeeArff~i~sL~~hle 104 (302)
T KOG1665|consen 88 LEEARFFQILSLKDHLE 104 (302)
T ss_pred HHHhhHHhhHhHHhHHh
Confidence 99998887777777765
No 166
>PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO). BTB (broad-complex, tramtrack and bric a brac) is a Kelch related domain, also known as the POZ domain []. BTB proteins are divided into subgroups depending on what domain lies at the C terminus. Despite the divergence in sequences, the BTB fold is highly conserved. BTB-Kelch proteins have Kelch repeats that form a beta-propeller that can interact with actin filaments []. BTB and C-terminal Kelch (BACK) together constitute a novel conserved domain, which is thought to have a possible role in substrate orientation in Cullin3-based E3 ligase complexes. Four domains, namely the BTB domain, a kelch domain, a BACK domain, and an intervening region (IVR) make up the aryl hydrocarbon receptor (AHR); a ligand-activated transcription factor []. This entry represents the domain associated with BTB and Kelch.; PDB: 3HVE_A 2EQX_A 3I3N_A 4AP2_A 4APF_A.
Probab=74.73 E-value=2.6 Score=34.90 Aligned_cols=29 Identities=24% Similarity=0.228 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 263 ELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 263 ~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
|+.++.+|..+++..|.+.|.+|+..||.
T Consensus 1 C~~i~~~A~~~~~~~L~~~~~~~i~~nf~ 29 (103)
T PF07707_consen 1 CLSIYRLAEKYGLEELAEACLRFIAKNFN 29 (103)
T ss_dssp HHHHHHHHHHTT-HHHHHHHHHHHHHTHH
T ss_pred ChhHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999986
No 167
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=72.89 E-value=7.9 Score=36.90 Aligned_cols=51 Identities=25% Similarity=0.331 Sum_probs=38.6
Q ss_pred hcCCHHHHHHHHHcC-CCCCCC---CCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 42 RAGDVDRLRYILESG-VNVNAR---DQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 42 ~~g~~~~~~~Ll~~g-~~in~~---d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
-..+..++++.+.+| +++|.+ -..|.|.|--|..++..+++.+|+++||..
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 345567778888887 566654 356888888888888888888888888753
No 168
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=59.60 E-value=16 Score=28.64 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=36.6
Q ss_pred hhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007317 36 DVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES 88 (608)
Q Consensus 36 ~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 88 (608)
-+..|..+|+.++++..++.+ .++ ...+..|....+-+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 357899999999999888755 221 3478899999999999999875
No 169
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=58.45 E-value=17 Score=33.69 Aligned_cols=44 Identities=20% Similarity=0.171 Sum_probs=28.2
Q ss_pred hhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 007317 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL 86 (608)
Q Consensus 37 l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll 86 (608)
|.+|+..|-...+...+++|.+++. +.|..|+.++|+.++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 4566666666666666666665543 5666667777766666654
No 170
>smart00875 BACK BTB And C-terminal Kelch. The BACK domain is found juxtaposed to the BTB domain; they are separated by as little as two residues.
Probab=57.36 E-value=9.1 Score=31.23 Aligned_cols=29 Identities=28% Similarity=0.337 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 263 ELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 263 ~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
|+.++.+|..+++..|.+.|..|+.+||.
T Consensus 1 c~~i~~~a~~~~~~~L~~~~~~~i~~nf~ 29 (101)
T smart00875 1 CLGIRRFAELYGLEELLEKALRFILKNFL 29 (101)
T ss_pred CHhHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999986
No 171
>KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones]
Probab=49.14 E-value=1.9e+02 Score=26.45 Aligned_cols=110 Identities=11% Similarity=0.040 Sum_probs=62.4
Q ss_pred cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCcccc---Chh-hHHHHHHHHhHhcH
Q 007317 178 QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEI---AVD-DMEDLVKICKVCKC 253 (608)
Q Consensus 178 ~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i---~~~-~~~~ll~~A~~c~~ 253 (608)
+|+.|.+-..+. ..|..+.+++...-.......|++++|+..+|..++.|+|--.-+. ..+ .......+ ..+..
T Consensus 13 DG~~f~ve~~~a-~~s~~i~~~~~~~~~~~~~~~IPl~nV~~~iL~kVIewC~~Hk~d~~~~~~~~~~~~~~~i-~~WD~ 90 (162)
T KOG1724|consen 13 DGEIFEVEEEVA-RQSQTISAHMIEDGCADENDPIPLPNVTSKILKKVIEWCKKHKDDDPANPEDKELPEETDI-PEWDA 90 (162)
T ss_pred CCceeehhHHHH-HHhHHHHHHHHHcCCCccCCccccCccCHHHHHHHHHHHHHcccccccccccccccccCCc-cHHHH
Confidence 667777766554 4566666666532111121578999999999999999999733210 000 00000000 11113
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007317 254 ESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQG 289 (608)
Q Consensus 254 ~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~ 289 (608)
.||+---.....+...|..++.+.|...|.+.+...
T Consensus 91 ~Flk~d~~tLfdli~AAnyLdi~gLl~~~ck~va~m 126 (162)
T KOG1724|consen 91 EFLKVDQGTLFDLILAANYLDIKGLLDLTCKTVANM 126 (162)
T ss_pred HHHhcCHHHHHHHHHHhhhcccHHHHHHHHHHHHHH
Confidence 444411113455666777888888888777776554
No 172
>KOG2723 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=35.52 E-value=94 Score=29.96 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=56.6
Q ss_pred CCCcEEEE-eCCeEEeehHH-HHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCC
Q 007317 341 DLADVCVR-VDKKIFRCHQV-VLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDI 418 (608)
Q Consensus 341 ~~~Dv~l~-~~~~~~~~Hr~-iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~ 418 (608)
.++|++-. ++|..+..-.. ..+-.-....+||++ +... ..+.....-|. =+-..|+.||+|+-+.... +
T Consensus 6 ~~~~~v~lnvGG~~ytt~l~tL~~~~ds~L~~~f~~---~~~~----~~d~~g~~fID-RDG~lFRyvL~~LRt~~l~-l 76 (221)
T KOG2723|consen 6 EYPDVVELNVGGAIYTTRLGTLTKFPDSMLARMFSG---ELPL----LRDSKGRYFID-RDGFLFRYVLDYLRTKALL-L 76 (221)
T ss_pred ccCCceeeccCCeEEEeeccceeechHHHHHhhcCC---CCCc----cccccccEEEc-CCcchHHHHHHHhcccccc-c
Confidence 45565544 56654443222 222233344555554 1111 11122233333 3557899999999996664 6
Q ss_pred CCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHH
Q 007317 419 DPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADV 470 (608)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~ 470 (608)
+.+ ..++..++..|++|+++.+...+.+-
T Consensus 77 pe~-----------------------f~e~~~L~rEA~f~~l~~~~~~l~~~ 105 (221)
T KOG2723|consen 77 PED-----------------------FAEVERLVREAEFFQLEAPVTYLLNS 105 (221)
T ss_pred chh-----------------------hhhHHHHHHHHHHHccccHHHHHhcc
Confidence 654 12788999999999999877766543
No 173
>KOG3840 consensus Uncharaterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=32.15 E-value=84 Score=31.44 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=56.3
Q ss_pred cEEEEeCCeEEeehHHHHhhccH-HHHHHHccccccccCCCCCCCCCCCceec-CCCCHHHHHHHHHHHhcCCCCCCCCC
Q 007317 344 DVCVRVDKKIFRCHQVVLASRSE-YFKARLSRMKDFYEGKEGLPGDILPCIEE-HDLSKETFEKMIEYMYTDGLKDIDPD 421 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS~-yF~~~~~~~~~~~e~~~~~~~~~~~~i~l-~~~~~~~~~~ll~yiYt~~~~~~~~~ 421 (608)
-+++.+++..|-.-+.+|.+.-. -.-.||.++.+|.... ...+.++ .+++..+|+.||+|--+|.+. -+..
T Consensus 97 ~~t~lvd~~rf~v~q~llt~~p~Tmlg~mf~~g~~f~~pN------ErgEyeVAdGi~s~vFRAILdYYksG~iR-CP~~ 169 (438)
T KOG3840|consen 97 KVCLLVDQTRFLVSQRLLTSKPDTMLGRMFSMGADLVSPN------ERDEFEVADGMTSSCFRAILDYYQSGTMR-CPSS 169 (438)
T ss_pred ceEEEeeeEEEEeeeeeecCCcchhhhhhhcccccccCCC------cCCceehhcchhHHHHHHHHHHHhcCcee-CCCC
Confidence 47777888888888888744321 2345665533332211 1223443 469999999999999999886 4444
Q ss_pred cccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCch
Q 007317 422 QVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLF 461 (608)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~ 461 (608)
- .+-+|-+++|+|.++
T Consensus 170 v------------------------SvpELrEACDYLlip 185 (438)
T KOG3840|consen 170 V------------------------SVSELREACDYLLVP 185 (438)
T ss_pred C------------------------chHHHHhhcceEEee
Confidence 1 667777777777764
No 174
>KOG2715 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=31.16 E-value=1.1e+02 Score=27.84 Aligned_cols=69 Identities=12% Similarity=0.063 Sum_probs=45.3
Q ss_pred CCCeeEEecCeeeehhhhhHhccCHHHHHhc-ccccCc---CcccEEEcCCCCHHHHHHHHHHHhcCccccCh
Q 007317 170 PPDVVFYVQGRPIEAHRVILSARSVFFRRKF-ETDWRY---RNEIRFSREKLSYPALYGLIHFFYSDRLEIAV 238 (608)
Q Consensus 170 ~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf-~~~~~e---~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~ 238 (608)
..-|.+.|||+.|.--|.-|..-+..|-..| .....- ....---+-+=+|..|--+|+|+-.|++.++.
T Consensus 20 s~wVRlNVGGt~f~TtktTl~rdp~sFl~rl~q~~~~l~sdrDetGAYlIDRDP~~FgpvLNylRhgklvl~~ 92 (210)
T KOG2715|consen 20 SLWVRLNVGGTVFLTTKTTLPRDPKSFLYRLCQREKDLPSDRDETGAYLIDRDPFYFGPVLNYLRHGKLVLNK 92 (210)
T ss_pred eEEEEEecCCEEEEeeeeccccCcHHHHHHHHhcccCCCCCccccCceEeccCcchHHHHHHHHhcchhhhhh
Confidence 3467888999999888888877774554433 332111 11111112256889999999999999986654
No 175
>PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex []. It was found to bind several F-box containing proteins (e.g., Cdc4, Skp2, cyclin F) and to be involved in the ubiquitin protein degradation pathway. A yeast homologue of SKP1 (P52286) was identified in the centromere bound kinetochore complex [] and is also involved in the ubiquitin pathway []. In Dictyostelium discoideum (Slime mold) FP21 was shown to be glycosylated in the cytosol and has homology to SKP1 []. This entry represents a dimerisation domain found at the C-terminal of SKP1 proteins [], as well as in subunit D of the centromere DNA-binding protein complex Cbf3 []. This domain is multi-helical in structure, and consists of an interlocked herterodimer in F-box proteins.; GO: 0006511 ubiquitin-dependent protein catabolic process; PDB: 2P1O_A 3OGL_G 3OGM_A 3C6O_A 2P1N_A 2P1Q_A 3OGK_I 3C6N_A 3C6P_A 2P1P_A ....
Probab=24.81 E-value=1.4e+02 Score=23.43 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhccCchHHHHHHHHHHHHhHHH
Q 007317 479 SPAELCHWLILSDMYGVFKVREYCLEVIACNFET 512 (608)
Q Consensus 479 ~~~n~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~ 512 (608)
+.+..+.++..|...+...|.+.|..+|+..+..
T Consensus 12 ~~~~L~~l~~AA~yL~I~~L~~~~~~~iA~~i~g 45 (78)
T PF01466_consen 12 DNDELFDLLNAANYLDIKGLLDLCCKYIANMIKG 45 (78)
T ss_dssp -HHHHHHHHHHHHHHT-HHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhcC
Confidence 6788999999999999999999999999877663
No 176
>COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
Probab=22.54 E-value=5.2e+02 Score=22.54 Aligned_cols=114 Identities=9% Similarity=0.061 Sum_probs=65.4
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhh-HHHHHHHH--
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDD-MEDLVKIC-- 248 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~-~~~ll~~A-- 248 (608)
+.+.. +|..|.+.+. .|-||-..+.|+... ......|..++|...+|..+++|+-...-..+++. -.++...+
T Consensus 4 i~l~s~dge~F~vd~~-iAerSiLikN~l~d~--~~~n~p~p~pnVrSsvl~kv~ew~ehh~~s~sede~d~~~rks~p~ 80 (158)
T COG5201 4 IELESIDGEIFRVDEN-IAERSILIKNMLCDS--TACNYPIPAPNVRSSVLMKVQEWMEHHTSSLSEDENDLEIRKSKPS 80 (158)
T ss_pred eEEEecCCcEEEehHH-HHHHHHHHHHHhccc--cccCCCCcccchhHHHHHHHHHHHHhccccCCCccChHhhhccCCc
Confidence 44443 6677777654 467777778777532 11223366789999999999999987655444432 12222222
Q ss_pred hHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007317 249 KVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQG 289 (608)
Q Consensus 249 ~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~ 289 (608)
+...-.|+.---+-.+++..-|..+..+.|.+.|.+.+.+.
T Consensus 81 D~wdr~Fm~vDqemL~eI~laaNYL~ikpLLd~gCKivaem 121 (158)
T COG5201 81 DFWDRFFMEVDQEMLLEICLAANYLEIKPLLDLGCKIVAEM 121 (158)
T ss_pred cHHHHHHHHhhHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 11111122111112355556677778888888877776654
No 177
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=21.82 E-value=1.6e+02 Score=33.98 Aligned_cols=53 Identities=13% Similarity=0.216 Sum_probs=44.9
Q ss_pred ccCCCCcchHHHHHHHHHHhhhhhccchhhHHhHHHHHHHHHHHhhhccCCCC
Q 007317 547 INVDQGNLLDDLREKWLEAEAAELDKRDESALMFDKRLEMLMQVAKDEKSEPI 599 (608)
Q Consensus 547 e~~d~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (608)
.++-++.++.+.+.+|++......++-++.+.+|++.++-+.+-++..+--+-
T Consensus 784 n~~ltls~IkD~ii~~l~~~~~~I~qd~~~Ie~yk~~i~e~r~~l~~lr~sa~ 836 (933)
T KOG2114|consen 784 NGTLTLSVIKDYIIKWLNKYSTIIEQDEDAIEVYKKDIEEKRQELETLRTSAQ 836 (933)
T ss_pred CCceEEehhHHHHHHHHHhhhHHHHhhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34455788889999999999999988888999999999999999987765443
Done!