Query 007317
Match_columns 608
No_of_seqs 439 out of 4544
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 22:44:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 3.4E-31 1.2E-35 263.4 11.1 199 325-570 14-212 (256)
2 3i3n_A Kelch-like protein 11; 100.0 9.1E-31 3.1E-35 263.7 8.1 198 324-570 14-220 (279)
3 3htm_A Speckle-type POZ protei 99.9 1.4E-27 4.8E-32 222.6 14.2 151 329-517 21-171 (172)
4 3hqi_A Speckle-type POZ protei 99.9 2.1E-25 7.3E-30 228.2 13.8 150 330-517 162-311 (312)
5 4eoz_A Speckle-type POZ protei 99.9 6.9E-25 2.4E-29 198.2 7.3 134 329-500 12-145 (145)
6 2if5_A Zinc finger and BTB dom 99.9 3.9E-22 1.3E-26 173.9 11.8 111 326-471 9-119 (120)
7 2vkp_A BTB/POZ domain-containi 99.9 6E-22 2.1E-26 169.6 12.6 104 336-475 2-109 (109)
8 1r29_A B-cell lymphoma 6 prote 99.9 8.3E-22 2.8E-26 173.6 12.6 112 326-473 13-125 (127)
9 3b84_A Zinc finger and BTB dom 99.9 5E-22 1.7E-26 172.8 9.0 109 326-473 8-116 (119)
10 2z8h_A Transcription regulator 99.9 3.6E-22 1.2E-26 178.5 8.2 113 326-475 20-133 (138)
11 1buo_A POZ domain, protein (pr 99.9 1.1E-21 3.6E-26 171.3 10.9 110 326-475 12-121 (121)
12 2ppi_A Gigaxonin; BTB domain, 99.9 1.1E-21 3.6E-26 176.5 11.0 115 324-471 29-143 (144)
13 2vpk_A Myoneurin; transcriptio 99.9 1.7E-21 5.9E-26 168.7 10.9 107 327-472 7-115 (116)
14 2yy9_A Zinc finger and BTB dom 99.8 7.9E-22 2.7E-26 175.5 7.6 112 325-475 8-119 (135)
15 2q81_A MIZ-1 protein; BTB/POZ 99.8 2E-21 6.9E-26 168.9 10.0 107 326-472 11-117 (119)
16 3ohu_A Transcription regulator 99.8 1.5E-21 5.1E-26 171.4 4.1 111 324-471 14-125 (125)
17 3ga1_A Nucleus accumbens-assoc 99.8 4.2E-21 1.4E-25 169.5 6.3 111 325-474 16-127 (129)
18 2ihc_A Transcription regulator 99.8 1.7E-21 5.8E-26 170.7 3.3 109 327-472 14-123 (124)
19 3htm_A Speckle-type POZ protei 99.8 1.8E-19 6.1E-24 167.5 13.3 124 168-291 32-165 (172)
20 3fkc_A Transcriptional regulat 99.8 1.9E-19 6.6E-24 155.4 9.2 103 324-465 13-115 (116)
21 4gpm_A Engineered protein OR26 99.8 6.5E-19 2.2E-23 163.1 12.5 121 14-144 26-149 (169)
22 3hve_A Gigaxonin; ubiquitin, c 99.8 4.5E-19 1.5E-23 175.8 11.7 126 166-291 27-164 (256)
23 3m5b_A Zinc finger and BTB dom 99.8 1.5E-19 5.2E-24 156.6 6.7 99 329-473 19-117 (119)
24 3i3n_A Kelch-like protein 11; 99.8 1.2E-18 4.2E-23 175.0 10.2 132 168-299 30-182 (279)
25 3hqi_A Speckle-type POZ protei 99.7 1.1E-17 3.9E-22 170.8 13.7 124 168-291 172-305 (312)
26 4eoz_A Speckle-type POZ protei 99.7 2.6E-18 8.8E-23 154.9 7.7 112 168-279 23-144 (145)
27 2vkp_A BTB/POZ domain-containi 99.7 1.3E-17 4.3E-22 142.5 11.0 94 166-260 4-101 (109)
28 2if5_A Zinc finger and BTB dom 99.7 1.1E-17 3.8E-22 145.5 10.7 95 168-262 23-117 (120)
29 3c5r_A BARD-1, BRCA1-associate 99.7 2.8E-17 9.6E-22 146.2 11.8 118 15-143 1-121 (137)
30 1r29_A B-cell lymphoma 6 prote 99.7 3.6E-17 1.2E-21 143.8 11.3 93 168-261 27-120 (127)
31 1d9s_A Cyclin-dependent kinase 99.7 1.7E-17 5.9E-22 147.5 8.6 119 15-144 2-124 (136)
32 2ppi_A Gigaxonin; BTB domain, 99.7 4.3E-17 1.5E-21 146.4 10.1 95 167-261 44-140 (144)
33 3b84_A Zinc finger and BTB dom 99.7 4.3E-17 1.5E-21 141.4 8.4 90 168-261 22-111 (119)
34 4gpm_A Engineered protein OR26 99.7 1.1E-16 3.7E-21 148.1 11.5 102 14-123 59-163 (169)
35 3f6q_A Integrin-linked protein 99.7 2.1E-16 7.3E-21 147.3 12.6 121 14-144 28-151 (179)
36 2y1l_E Darpin-8.4; hydrolase-i 99.7 2.3E-16 7.8E-21 145.7 12.5 121 14-144 36-159 (169)
37 3twr_A Tankyrase-2; ankyrin re 99.7 4.2E-16 1.5E-20 143.1 14.0 118 14-141 31-151 (165)
38 2vpk_A Myoneurin; transcriptio 99.7 1.7E-16 5.7E-21 137.1 9.8 90 168-261 20-111 (116)
39 1buo_A POZ domain, protein (pr 99.7 2E-16 7E-21 137.6 10.4 90 168-262 26-115 (121)
40 2yy9_A Zinc finger and BTB dom 99.7 1.2E-16 4.1E-21 141.9 8.9 85 167-255 22-106 (135)
41 1awc_B Protein (GA binding pro 99.7 2.9E-16 1E-20 142.4 11.6 119 15-144 25-146 (153)
42 3v31_A Ankyrin repeat family A 99.7 2.7E-16 9.3E-21 144.7 11.5 120 15-144 26-148 (167)
43 4b93_B Ankyrin repeat domain-c 99.7 2.7E-16 9.3E-21 157.0 12.3 127 14-142 75-229 (269)
44 2rfm_A Putative ankyrin repeat 99.7 3.5E-16 1.2E-20 147.5 11.3 120 15-144 58-180 (192)
45 1ihb_A P18-INK4C(INK6), cyclin 99.6 4.7E-16 1.6E-20 142.1 11.4 120 14-144 27-150 (162)
46 2z8h_A Transcription regulator 99.6 2.4E-16 8.1E-21 140.6 8.8 99 168-290 34-133 (138)
47 1bd8_A P19INK4D CDK4/6 inhibit 99.6 6.3E-16 2.2E-20 140.4 11.8 119 14-144 25-146 (156)
48 3aaa_C Myotrophin, protein V-1 99.6 3.8E-16 1.3E-20 136.1 9.8 109 22-140 4-115 (123)
49 3v30_A DNA-binding protein rfx 99.6 5E-16 1.7E-20 143.6 10.7 118 17-144 28-148 (172)
50 3fkc_A Transcriptional regulat 99.6 3.9E-16 1.3E-20 134.6 8.9 86 168-258 29-115 (116)
51 3ohu_A Transcription regulator 99.6 8.3E-17 2.9E-21 141.0 4.7 88 168-257 30-118 (125)
52 4b93_B Ankyrin repeat domain-c 99.6 4.1E-16 1.4E-20 155.7 9.8 107 35-143 88-197 (269)
53 2q81_A MIZ-1 protein; BTB/POZ 99.6 2.9E-16 1E-20 136.2 7.3 90 168-262 25-114 (119)
54 3m5b_A Zinc finger and BTB dom 99.6 6.1E-16 2.1E-20 133.8 8.8 86 168-262 28-113 (119)
55 2ihc_A Transcription regulator 99.6 1.2E-16 4E-21 139.8 3.9 90 168-259 27-117 (124)
56 2jab_A H10-2-G3; HER2, darpin, 99.6 6.2E-16 2.1E-20 137.3 8.3 113 22-144 11-126 (136)
57 1n0q_A 3ANK, 3 ankyrin repeats 99.6 2.3E-15 7.8E-20 124.2 10.5 90 24-121 1-93 (93)
58 3t8k_A Uncharacterized protein 99.6 3.9E-16 1.3E-20 146.8 6.1 118 17-144 29-167 (186)
59 2rfa_A Transient receptor pote 99.6 2.5E-15 8.4E-20 146.0 11.6 121 14-144 26-167 (232)
60 3ga1_A Nucleus accumbens-assoc 99.6 3.5E-16 1.2E-20 137.8 5.0 87 168-258 31-118 (129)
61 1oy3_D Transcription factor in 99.6 2.8E-15 9.7E-20 149.7 11.5 120 15-144 148-271 (282)
62 2rfm_A Putative ankyrin repeat 99.6 1.1E-15 3.6E-20 144.2 7.9 118 17-144 27-147 (192)
63 1bi7_B P16INK4A, MTS1, multipl 99.6 2.5E-15 8.7E-20 136.7 10.1 111 15-136 35-149 (156)
64 3hra_A Ankyrin repeat family p 99.6 8E-15 2.7E-19 138.9 13.7 119 15-143 29-152 (201)
65 1n0r_A 4ANK, 4 ankyrin repeats 99.6 4E-15 1.4E-19 129.4 10.6 111 24-144 1-114 (126)
66 2dzn_A Probable 26S proteasome 99.6 8.8E-15 3E-19 141.5 13.8 115 16-140 98-217 (228)
67 1d9s_A Cyclin-dependent kinase 99.6 5.8E-15 2E-19 131.0 11.3 99 14-121 34-136 (136)
68 1bi7_B P16INK4A, MTS1, multipl 99.6 1E-15 3.6E-20 139.3 6.5 116 18-144 5-124 (156)
69 3aji_A 26S proteasome non-ATPa 99.6 6.4E-15 2.2E-19 142.9 12.3 120 15-144 63-185 (231)
70 1yyh_A HN1;, notch 1, ankyrin 99.6 3.8E-15 1.3E-19 147.0 10.7 117 15-141 80-200 (253)
71 3aji_A 26S proteasome non-ATPa 99.6 6.6E-15 2.3E-19 142.7 12.0 120 15-144 30-152 (231)
72 1ikn_D Protein (I-kappa-B-alph 99.6 1E-14 3.4E-19 142.2 13.1 118 16-143 36-163 (236)
73 2xai_A ASB-9, ankyrin repeat a 99.6 7.8E-15 2.7E-19 145.5 11.8 120 14-144 25-147 (261)
74 2jab_A H10-2-G3; HER2, darpin, 99.6 1.1E-14 3.7E-19 129.2 11.3 98 14-119 36-136 (136)
75 3b7b_A Euchromatic histone-lys 99.6 1.2E-14 4E-19 141.5 12.5 118 16-143 102-222 (237)
76 1s70_B 130 kDa myosin-binding 99.6 1.8E-14 6.1E-19 145.5 14.2 125 14-148 95-282 (299)
77 1k1a_A B-cell lymphoma 3-encod 99.6 1.4E-14 4.8E-19 141.2 12.9 114 17-140 108-225 (241)
78 3jxi_A Vanilloid receptor-rela 99.6 3.4E-15 1.2E-19 147.7 8.4 121 16-144 84-238 (260)
79 3v31_A Ankyrin repeat family A 99.6 1.1E-14 3.9E-19 133.7 11.3 111 24-144 2-115 (167)
80 2vge_A RELA-associated inhibit 99.6 1.8E-14 6.1E-19 140.1 13.2 119 15-143 8-135 (229)
81 3hra_A Ankyrin repeat family p 99.6 1.2E-14 4E-19 137.7 11.4 121 14-144 61-191 (201)
82 1s70_B 130 kDa myosin-binding 99.6 1.1E-14 3.7E-19 147.1 11.7 121 14-144 62-245 (299)
83 3ehr_A Osteoclast-stimulating 99.6 5.3E-15 1.8E-19 142.8 8.9 113 21-143 69-185 (222)
84 2f8y_A Notch homolog 1, transl 99.6 1.8E-14 6.3E-19 138.8 12.3 119 15-143 48-170 (223)
85 2vge_A RELA-associated inhibit 99.6 6.3E-15 2.1E-19 143.4 9.0 116 15-140 44-165 (229)
86 1yyh_A HN1;, notch 1, ankyrin 99.5 9.2E-15 3.1E-19 144.3 10.2 120 15-144 46-170 (253)
87 1ikn_D Protein (I-kappa-B-alph 99.5 8E-15 2.7E-19 142.9 9.5 119 16-144 69-197 (236)
88 1oy3_D Transcription factor in 99.5 1.4E-14 4.7E-19 144.7 11.1 121 14-144 67-238 (282)
89 2etb_A Transient receptor pote 99.5 9.1E-15 3.1E-19 144.4 9.6 116 21-144 86-234 (256)
90 2f8y_A Notch homolog 1, transl 99.5 2.2E-14 7.5E-19 138.2 12.1 121 14-144 13-138 (223)
91 2rfa_A Transient receptor pote 99.5 1.5E-14 5E-19 140.5 10.7 119 18-144 68-210 (232)
92 2l6b_A NR1C; ankyrin, consensu 99.5 4.2E-15 1.4E-19 127.7 6.1 105 20-134 4-111 (115)
93 3deo_A Signal recognition part 99.5 3.5E-15 1.2E-19 139.7 6.0 109 22-141 41-153 (183)
94 1sw6_A Regulatory protein SWI6 99.5 1.9E-14 6.6E-19 147.8 11.9 97 14-118 119-227 (327)
95 3aaa_C Myotrophin, protein V-1 99.5 1.9E-14 6.7E-19 125.1 9.7 94 14-115 29-122 (123)
96 1n11_A Ankyrin; clathrin, BAND 99.5 1.2E-14 4.1E-19 155.3 9.8 121 14-144 3-126 (437)
97 3d9h_A CDNA FLJ77766, highly s 99.5 2.7E-14 9.1E-19 143.7 11.3 115 18-143 52-169 (285)
98 2etb_A Transient receptor pote 99.5 8E-15 2.7E-19 144.8 7.3 117 14-140 28-181 (256)
99 3b7b_A Euchromatic histone-lys 99.5 4E-14 1.4E-18 137.8 12.1 119 16-144 2-124 (237)
100 2b0o_E UPLC1; arfgap, structur 99.5 1.4E-14 4.8E-19 147.0 9.2 114 14-143 173-298 (301)
101 2pnn_A Transient receptor pote 99.5 1.8E-14 6.2E-19 143.7 9.9 117 20-144 96-246 (273)
102 1ycs_B 53BP2, P53BP2; ankyrin 99.5 1.3E-14 4.4E-19 142.0 8.5 113 15-138 28-144 (239)
103 3v30_A DNA-binding protein rfx 99.5 2.3E-14 8E-19 132.3 9.8 110 15-134 59-171 (172)
104 2dzn_A Probable 26S proteasome 99.5 3.5E-14 1.2E-18 137.2 11.0 118 16-143 62-186 (228)
105 2xai_A ASB-9, ankyrin repeat a 99.5 5.6E-14 1.9E-18 139.3 12.8 119 14-144 58-179 (261)
106 3kea_A K1L; tropism, ANK repea 99.5 1.3E-14 4.4E-19 146.0 8.1 117 16-144 22-142 (285)
107 2y1l_E Darpin-8.4; hydrolase-i 99.5 2.3E-14 7.8E-19 132.2 8.9 106 37-144 18-126 (169)
108 4hbd_A KN motif and ankyrin re 99.5 2.5E-14 8.7E-19 143.2 9.8 117 18-144 104-263 (276)
109 1n0r_A 4ANK, 4 ankyrin repeats 99.5 8.9E-14 3E-18 120.7 11.9 99 15-121 25-126 (126)
110 1k1a_A B-cell lymphoma 3-encod 99.5 6.5E-14 2.2E-18 136.4 12.1 121 14-144 35-163 (241)
111 3d9h_A CDNA FLJ77766, highly s 99.5 4.5E-14 1.6E-18 142.0 11.2 116 18-144 85-203 (285)
112 3utm_A Tankyrase-1; tankyrase, 99.5 8.2E-14 2.8E-18 143.5 12.9 118 14-141 47-167 (351)
113 1n11_A Ankyrin; clathrin, BAND 99.5 4.5E-14 1.5E-18 150.8 11.1 119 15-143 268-389 (437)
114 1ihb_A P18-INK4C(INK6), cyclin 99.5 8.1E-14 2.8E-18 127.1 11.2 100 14-121 59-162 (162)
115 3twr_A Tankyrase-2; ankyrin re 99.5 4.3E-14 1.5E-18 129.5 9.2 99 14-120 64-164 (165)
116 3ui2_A Signal recognition part 99.5 2E-14 6.8E-19 141.2 7.3 107 23-140 43-153 (244)
117 3ljn_A Hypothetical protein; a 99.5 2.5E-14 8.7E-19 148.9 8.0 118 17-144 130-257 (364)
118 3f6q_A Integrin-linked protein 99.5 9E-14 3.1E-18 129.4 10.5 103 14-124 61-166 (179)
119 1wdy_A 2-5A-dependent ribonucl 99.5 1.1E-13 3.8E-18 137.9 11.8 123 14-144 27-161 (285)
120 3jxi_A Vanilloid receptor-rela 99.5 3.5E-14 1.2E-18 140.4 7.5 120 14-143 31-188 (260)
121 3ljn_A Hypothetical protein; a 99.5 9.6E-14 3.3E-18 144.5 11.0 121 14-144 42-224 (364)
122 2pnn_A Transient receptor pote 99.5 4.4E-14 1.5E-18 140.9 7.9 119 15-143 40-196 (273)
123 1bd8_A P19INK4D CDK4/6 inhibit 99.5 2E-13 6.7E-18 123.8 11.1 96 14-118 57-155 (156)
124 1awc_B Protein (GA binding pro 99.5 2E-13 6.8E-18 123.5 10.9 94 14-115 56-152 (153)
125 3lvq_E ARF-GAP with SH3 domain 99.5 1E-13 3.6E-18 150.7 10.5 111 14-140 154-276 (497)
126 4hbd_A KN motif and ankyrin re 99.5 5.6E-14 1.9E-18 140.7 7.6 109 24-142 75-194 (276)
127 1ycs_B 53BP2, P53BP2; ankyrin 99.5 7.4E-14 2.5E-18 136.6 8.3 103 14-124 59-167 (239)
128 1dcq_A PYK2-associated protein 99.4 2.4E-13 8.2E-18 136.2 11.5 97 18-122 162-264 (278)
129 3kea_A K1L; tropism, ANK repea 99.4 6.1E-14 2.1E-18 141.1 7.1 117 15-144 54-174 (285)
130 3c5r_A BARD-1, BRCA1-associate 99.4 5.7E-14 1.9E-18 124.6 6.0 95 14-116 32-129 (137)
131 3utm_A Tankyrase-1; tankyrase, 99.4 2.8E-13 9.6E-18 139.5 11.9 121 14-144 80-260 (351)
132 2fo1_E LIN-12 protein; beta-ba 99.4 2.1E-13 7.2E-18 142.7 11.0 123 14-144 155-292 (373)
133 1wdy_A 2-5A-dependent ribonucl 99.4 4.7E-13 1.6E-17 133.4 12.2 120 14-143 61-194 (285)
134 3eu9_A Huntingtin-interacting 99.4 5E-13 1.7E-17 129.7 12.1 120 14-143 31-154 (240)
135 2zgd_A 3 repeat synthetic anky 99.4 3E-13 1E-17 115.2 8.2 90 18-115 17-109 (110)
136 3ehr_A Osteoclast-stimulating 99.4 2.1E-13 7.2E-18 131.6 8.1 103 14-124 95-201 (222)
137 2ast_A S-phase kinase-associat 99.4 7.6E-13 2.6E-17 120.3 10.9 141 345-499 3-150 (159)
138 3jue_A Arfgap with coiled-coil 99.4 6E-13 2.1E-17 138.3 11.4 112 22-143 196-313 (368)
139 2fo1_E LIN-12 protein; beta-ba 99.4 3E-13 1E-17 141.5 9.0 119 16-144 226-359 (373)
140 3eu9_A Huntingtin-interacting 99.4 5.9E-13 2E-17 129.2 10.5 119 15-143 65-189 (240)
141 3ui2_A Signal recognition part 99.4 9.6E-13 3.3E-17 129.1 11.5 107 13-144 65-173 (244)
142 3t8k_A Uncharacterized protein 99.4 2.6E-13 8.7E-18 127.4 6.8 100 14-121 64-179 (186)
143 4g8k_A 2-5A-dependent ribonucl 99.4 7.7E-13 2.6E-17 136.1 10.2 116 14-144 191-314 (337)
144 3deo_A Signal recognition part 99.4 8.6E-13 2.9E-17 123.3 9.5 87 13-107 64-152 (183)
145 4g8k_A 2-5A-dependent ribonucl 99.4 2.9E-12 9.8E-17 131.8 14.2 121 14-144 114-252 (337)
146 3jue_A Arfgap with coiled-coil 99.4 7.1E-13 2.4E-17 137.8 9.3 114 18-139 226-345 (368)
147 1n0q_A 3ANK, 3 ankyrin repeats 99.4 1.1E-12 3.8E-17 107.9 8.3 70 14-91 24-93 (93)
148 3lvq_E ARF-GAP with SH3 domain 99.3 2.5E-12 8.4E-17 139.8 10.8 108 35-144 134-253 (497)
149 2l6b_A NR1C; ankyrin, consensu 99.3 1.2E-12 4.1E-17 112.1 6.5 81 14-102 31-111 (115)
150 1dcq_A PYK2-associated protein 99.3 7.3E-12 2.5E-16 125.4 11.4 108 35-144 132-251 (278)
151 2b0o_E UPLC1; arfgap, structur 99.3 5E-12 1.7E-16 128.1 10.2 108 35-144 153-272 (301)
152 1sw6_A Regulatory protein SWI6 99.1 1.9E-11 6.7E-16 125.3 5.2 125 14-140 41-210 (327)
153 4ajy_C Transcription elongatio 99.1 5.5E-10 1.9E-14 92.3 9.0 83 345-460 4-97 (97)
154 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 5.4E-10 1.8E-14 99.1 9.0 126 345-489 4-135 (141)
155 2zgd_A 3 repeat synthetic anky 99.0 4.2E-10 1.4E-14 95.5 7.4 64 14-85 46-109 (110)
156 2aja_A Ankyrin repeat family p 99.0 1.9E-11 6.6E-16 127.4 -2.8 105 38-143 97-211 (376)
157 2aja_A Ankyrin repeat family p 99.0 1.5E-11 5.2E-16 128.2 -4.0 99 36-144 131-238 (376)
158 2p1m_A SKP1-like protein 1A; F 99.0 1.9E-10 6.3E-15 104.4 3.1 134 345-496 6-146 (160)
159 2eqx_A Kelch repeat and BTB do 98.9 8.1E-10 2.8E-14 92.8 3.4 78 478-569 8-85 (105)
160 4ajy_C Transcription elongatio 98.8 1.9E-08 6.4E-13 83.0 8.4 78 173-251 4-95 (97)
161 2ast_A S-phase kinase-associat 98.7 5.6E-08 1.9E-12 88.0 9.7 60 173-233 3-65 (159)
162 3v7d_A Suppressor of kinetocho 98.4 1.4E-06 4.7E-11 79.3 10.8 139 344-494 8-152 (169)
163 2fnj_C Transcription elongatio 98.2 1.9E-06 6.6E-11 70.5 7.2 93 345-460 3-96 (96)
164 1hv2_A Elongin C, ELC1; protei 98.2 2.7E-06 9.4E-11 70.0 7.5 93 345-460 6-99 (99)
165 3drz_A BTB/POZ domain-containi 98.1 2.6E-05 9E-10 65.2 11.0 99 344-473 7-106 (107)
166 1fs1_B SKP1, cyclin A/CDK2-ass 97.9 2.8E-05 9.4E-10 68.6 8.5 111 173-289 4-120 (141)
167 1vcb_B Protein (elongin C); tu 97.7 6E-05 2E-09 63.3 6.3 94 344-460 18-112 (112)
168 2p1m_A SKP1-like protein 1A; F 97.6 2.4E-05 8.3E-10 70.5 2.5 113 173-290 6-125 (160)
169 1hv2_A Elongin C, ELC1; protei 97.4 0.00046 1.6E-08 56.6 7.8 76 173-250 6-96 (99)
170 2fnj_C Transcription elongatio 97.3 0.00053 1.8E-08 55.9 6.8 78 173-251 3-94 (96)
171 3drz_A BTB/POZ domain-containi 97.0 0.0045 1.6E-07 51.4 9.8 89 172-261 7-101 (107)
172 3drx_A BTB/POZ domain-containi 96.8 0.0022 7.5E-08 59.1 6.8 100 344-474 13-113 (202)
173 1vcb_B Protein (elongin C); tu 96.2 0.01 3.6E-07 49.5 7.1 79 172-251 18-110 (112)
174 3v7d_A Suppressor of kinetocho 96.2 0.02 7E-07 51.6 9.6 117 172-289 8-132 (169)
175 1s1g_A Potassium voltage-gated 93.3 0.18 6.2E-06 42.7 6.8 96 344-473 14-111 (124)
176 3kvt_A Potassium channel prote 93.3 0.059 2E-06 45.1 3.6 86 345-464 7-93 (115)
177 3drx_A BTB/POZ domain-containi 93.1 0.24 8.3E-06 45.5 7.8 66 173-239 14-84 (202)
178 1t1d_A Protein (potassium chan 92.5 0.16 5.3E-06 41.3 5.0 86 345-464 3-90 (100)
179 2eqx_A Kelch repeat and BTB do 90.8 0.097 3.3E-06 43.0 2.1 39 261-299 11-51 (105)
180 2nz0_B Potassium voltage-gated 90.7 0.28 9.6E-06 42.5 5.0 87 343-463 35-121 (140)
181 1nn7_A Potassium channel KV4.2 89.9 0.25 8.5E-06 40.6 3.8 85 345-463 2-86 (105)
182 3kvt_A Potassium channel prote 83.9 0.77 2.6E-05 38.2 3.5 77 172-249 6-85 (115)
183 1s1g_A Potassium voltage-gated 77.4 2.3 7.8E-05 35.8 4.3 78 172-253 14-96 (124)
184 2nz0_B Potassium voltage-gated 76.6 3.8 0.00013 35.3 5.5 76 172-251 36-116 (140)
185 1nn7_A Potassium channel KV4.2 75.6 3.3 0.00011 33.7 4.7 75 173-251 2-81 (105)
186 1t1d_A Protein (potassium chan 73.8 3.2 0.00011 33.4 4.1 78 173-251 3-84 (100)
187 2r9r_B Paddle chimera voltage 49.5 19 0.00065 38.2 5.7 88 344-464 53-141 (514)
188 2plx_B Peptide inhibitor; heli 33.6 43 0.0015 18.6 2.7 22 484-505 2-23 (26)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=3.4e-31 Score=263.42 Aligned_cols=199 Identities=14% Similarity=0.207 Sum_probs=159.1
Q ss_pred hhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHH
Q 007317 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFE 404 (608)
Q Consensus 325 ~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~ 404 (608)
.....++.|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ .|.+. ++...+|.++++++++|+
T Consensus 14 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~--~~~~~-----e~~~~~i~l~~v~~~~f~ 86 (256)
T 3hve_A 14 HAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNY--NPPKD-----DGSTYKIELEGISVMVMR 86 (256)
T ss_dssp THHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------------CEEECSSCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCC--CCCcc-----cCCCCeEEeCCCCHHHHH
Confidence 34456778899999999999999999999999999999999999999998 44321 335578999999999999
Q ss_pred HHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHH
Q 007317 405 KMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELC 484 (608)
Q Consensus 405 ~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~ 484 (608)
.+++|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.+.+ +++||+
T Consensus 87 ~ll~~~Yt~~~~-i~~~-------------------------~v~~ll~~A~~l~i~~l~~~c~~~L~~~l---~~~n~~ 137 (256)
T 3hve_A 87 EILDYIFSGQIR-LNED-------------------------TIQDVVQAADLLLLTDLKTLCCEFLEGCI---AAENCI 137 (256)
T ss_dssp HHHHHHHHSCCC-CC-C-------------------------CHHHHHHHHHHHTCHHHHHHHHHHHHHTC---CSSTTH
T ss_pred HHHhhccCCCCc-ccHh-------------------------HHHHHHHHHHHHChHHHHHHHHHHHHhhC---CHhhHH
Confidence 999999999996 8888 99999999999999999999999999998 899999
Q ss_pred HHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHHHHHHHHH
Q 007317 485 HWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDDLREKWLE 564 (608)
Q Consensus 485 ~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~~~~~W~~ 564 (608)
.++.+|..|++..|.+.|.+||..||..+..+++|.+|..+ .+..++ .++++.+.+| .+++ +++++|++
T Consensus 138 ~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~----~l~~lL--~~d~L~v~~E----~~v~-~av~~W~~ 206 (256)
T 3hve_A 138 GIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQ----KLKEVI--SLEKLNVGNE----RYVF-EAVIRWIA 206 (256)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHH----HHHHHH--HCC-----------CTTH-HHHTTTCC
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHH----HHHHHH--ccCCCCCCCH----HHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999965444 432222 5556666667 6777 99999999
Q ss_pred Hhhhhh
Q 007317 565 AEAAEL 570 (608)
Q Consensus 565 ~~~~~~ 570 (608)
+++.+.
T Consensus 207 ~~~~~R 212 (256)
T 3hve_A 207 HDTEIR 212 (256)
T ss_dssp C--CCS
T ss_pred cCHHHH
Confidence 987644
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=9.1e-31 Score=263.66 Aligned_cols=198 Identities=23% Similarity=0.307 Sum_probs=167.4
Q ss_pred hhhcchHHhhcccccCCCCCcEEEEeC---CeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC----
Q 007317 324 CKLSSSVEAMHISDHVDDLADVCVRVD---KKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH---- 396 (608)
Q Consensus 324 ~~l~~~~~~l~~~~~~~~~~Dv~l~~~---~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~---- 396 (608)
......+..|+.++.++.+|||+|+++ |+.|+|||.||+++|+||++||.+ +|.| +...+|.++
T Consensus 14 ~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~--~~~e-------~~~~~i~l~~~~~ 84 (279)
T 3i3n_A 14 SHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG--QFSE-------SRSGRVEMRKWSS 84 (279)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------------EEECCCCSS
T ss_pred hHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC--CCcc-------ccCCeEEeccccc
Confidence 334456778888999999999999998 999999999999999999999998 4544 455789998
Q ss_pred --CCCHHHHHHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhh
Q 007317 397 --DLSKETFEKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLH 474 (608)
Q Consensus 397 --~~~~~~~~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~ 474 (608)
++++++|+.+++|+|||.+. ++.+ ++.+++.+|++|+++.|+..|+++|.+.
T Consensus 85 ~~~v~~~~f~~ll~~~Ytg~~~-i~~~-------------------------~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 85 EPGPEPDTVEAVIEYMYTGRIR-VSTG-------------------------SVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp TTCSCHHHHHHHHHHHHHSEEE-EETT-------------------------THHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhCcCCcc-cCHH-------------------------HHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 89999999999999999996 8888 9999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcc
Q 007317 475 LEMVSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNL 554 (608)
Q Consensus 475 l~~~~~~n~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~ 554 (608)
+ +++||+.++.+|..|++..|.+.|.+||..||..+..+++|.+|..+ .+..++ +++++.+.+| .++
T Consensus 139 l---~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~----~l~~lL--~~d~L~v~sE----~~v 205 (279)
T 3i3n_A 139 L---HLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFH----LIRDWL--SDLEITVDSE----EVL 205 (279)
T ss_dssp C---CTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHH----HHHHHH--TCSSCCCSCH----HHH
T ss_pred C---CcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHH----HHHHHh--cCcCCCCCCH----HHH
Confidence 8 89999999999999999999999999999999999999999965544 322222 5556666667 677
Q ss_pred hHHHHHHHHHHhhhhh
Q 007317 555 LDDLREKWLEAEAAEL 570 (608)
Q Consensus 555 ~~~~~~~W~~~~~~~~ 570 (608)
+ +++++|+++++.+.
T Consensus 206 f-~av~~W~~~~~~~r 220 (279)
T 3i3n_A 206 F-ETVLKWVQRNAEER 220 (279)
T ss_dssp H-HHHHHHHHTTHHHH
T ss_pred H-HHHHHHHHcCHHHH
Confidence 7 99999999987644
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=222.59 Aligned_cols=151 Identities=23% Similarity=0.340 Sum_probs=133.6
Q ss_pred hHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHH
Q 007317 329 SVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIE 408 (608)
Q Consensus 329 ~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~ 408 (608)
....|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ .|.|+ ...+|.++++++++|+.+|+
T Consensus 21 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~--~~~e~-------~~~~i~l~~~~~~~f~~~l~ 91 (172)
T 3htm_A 21 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EMEES-------KKNRVEINDVEPEVFKEMMC 91 (172)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHS--CCCGG-------GTTEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHcc--Ccccc-------CCCeEEecCCCHHHHHHHHH
Confidence 3455667788899999999999999999999999999999999998 55554 44789999999999999999
Q ss_pred HHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHH
Q 007317 409 YMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLI 488 (608)
Q Consensus 409 yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~ 488 (608)
|+|+|.+. ++.+ ++.+++.+|++|+++.|+..|+++|.+.+ +++||+.++.
T Consensus 92 ~~Yt~~~~-~~~~-------------------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~~~ 142 (172)
T 3htm_A 92 FIYTGKAP-NLDK-------------------------MADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILI 142 (172)
T ss_dssp HHHHSCCT-TGGG-------------------------THHHHHHHHHHTTCHHHHHHHHHHHHHTC---CTTTHHHHHH
T ss_pred HHhCCCCC-CcHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 99999996 7777 99999999999999999999999999998 8999999999
Q ss_pred HHhccCchHHHHHHHHHHHHhHHHhhcch
Q 007317 489 LSDMYGVFKVREYCLEVIACNFETFADSR 517 (608)
Q Consensus 489 ~A~~~~~~~L~~~c~~~I~~n~~~v~~~~ 517 (608)
+|..|++..|++.|.+||.+||..++.++
T Consensus 143 ~A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 171 (172)
T 3htm_A 143 LADLHSADQLKTQAVDFINYHATDVLETS 171 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTC-------
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998776
No 4
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.92 E-value=2.1e-25 Score=228.25 Aligned_cols=150 Identities=23% Similarity=0.337 Sum_probs=129.3
Q ss_pred HHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHH
Q 007317 330 VEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEY 409 (608)
Q Consensus 330 ~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~y 409 (608)
...|..++.++.++||+|.++|+.|+|||.|||+||+||++||.+ .|. ++...+|.++++++++|+.+|+|
T Consensus 162 ~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~--~~~-------e~~~~~i~l~~~~~~~f~~~L~~ 232 (312)
T 3hqi_A 162 ADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EME-------ESKKNRVEINDVEPEVFKEMMCF 232 (312)
T ss_dssp HHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC--------------CCSEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhcc--Ccc-------ccCCceEEecCCCHHHHHHHHHh
Confidence 344556777899999999999999999999999999999999998 444 44558999999999999999999
Q ss_pred HhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHH
Q 007317 410 MYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLIL 489 (608)
Q Consensus 410 iYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~ 489 (608)
||||.++ ++.+ ++.+|+.+|++|+++.|+..|+++|.+.+ +.+||+.++.+
T Consensus 233 iYt~~~~-~~~~-------------------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~~---~~~n~~~~l~~ 283 (312)
T 3hqi_A 233 IYTGKAP-NLDK-------------------------MADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILIL 283 (312)
T ss_dssp HHHSCCT-THHH-------------------------HHHHHHHHHHHTTCHHHHHHHHHHHHTTC---CTTTHHHHHHH
T ss_pred hcCCCCC-ChHH-------------------------HHHHHHHHHHHhCHHHHHHHHHHHHHccC---CHHHHHHHHHH
Confidence 9999986 6556 99999999999999999999999999988 89999999999
Q ss_pred HhccCchHHHHHHHHHHHHhHHHhhcch
Q 007317 490 SDMYGVFKVREYCLEVIACNFETFADSR 517 (608)
Q Consensus 490 A~~~~~~~L~~~c~~~I~~n~~~v~~~~ 517 (608)
|..|++..|++.|++||..||..++.++
T Consensus 284 A~~~~~~~L~~~~~~~i~~~~~~v~~s~ 311 (312)
T 3hqi_A 284 ADLHSADQLKTQAVDFINYHATDVLETS 311 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHHTC-------
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999998765
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.91 E-value=6.9e-25 Score=198.23 Aligned_cols=134 Identities=25% Similarity=0.362 Sum_probs=97.0
Q ss_pred hHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHH
Q 007317 329 SVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIE 408 (608)
Q Consensus 329 ~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~ 408 (608)
....|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ .|.|+ ...+|.++++++++|+.+|+
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~--~~~e~-------~~~~i~l~~~~~~~~~~~l~ 82 (145)
T 4eoz_A 12 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEH--EMEES-------KKNRVEINDVEPEVFKEMMC 82 (145)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHS--SSHHH-------HHTEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcC--CCcCC-------CCceEEecCCCHHHHHHHHH
Confidence 3455666788899999999999999999999999999999999998 56554 33689999999999999999
Q ss_pred HHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHH
Q 007317 409 YMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLI 488 (608)
Q Consensus 409 yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~ 488 (608)
|+|+|.+. ++.+ ++.+++.+|++|+++.|+..|+++|.+.+ +++||+.++.
T Consensus 83 ~~Y~~~~~-~~~~-------------------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~l---~~~n~~~~l~ 133 (145)
T 4eoz_A 83 FIYTGKAP-NLDK-------------------------MADDLLAAADKYALERLKVMCEDALCSNL---SVENAAEILI 133 (145)
T ss_dssp HHHHSCCT-TGGG-------------------------THHHHHHHHHHTTCHHHHHHHHCC------------------
T ss_pred hhccCccC-CcHH-------------------------HHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 99999996 7777 99999999999999999999999999998 8999999999
Q ss_pred HHhccCchHHHH
Q 007317 489 LSDMYGVFKVRE 500 (608)
Q Consensus 489 ~A~~~~~~~L~~ 500 (608)
+|..|++.+|++
T Consensus 134 ~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 134 LADLHSADQLKT 145 (145)
T ss_dssp ------------
T ss_pred HHHHhCHHHhcC
Confidence 999999998864
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.87 E-value=3.9e-22 Score=173.88 Aligned_cols=111 Identities=23% Similarity=0.332 Sum_probs=98.1
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ 405 (608)
.+..++.++.++.++.+|||+|.++|+.|+|||.||++||+||++||.+ .|.| +...+|.++++++++|+.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~--~~~e-------~~~~~i~l~~~~~~~f~~ 79 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTS--GAVV-------DQQNVYEIDFVSAEALTA 79 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC--------------CCSEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcC--Cccc-------cCCceEEeCCCCHHHHHH
Confidence 3445667778889999999999999999999999999999999999998 5554 445789999999999999
Q ss_pred HHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHH
Q 007317 406 MIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVL 471 (608)
Q Consensus 406 ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l 471 (608)
+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|
T Consensus 80 ll~~~Yt~~~~-~~~~-------------------------~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 80 LMDFAYTATLT-VSTA-------------------------NVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHSCCC-CCGG-------------------------GHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCc-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 99999999996 8888 9999999999999999999999987
No 7
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.87 E-value=6e-22 Score=169.58 Aligned_cols=104 Identities=27% Similarity=0.353 Sum_probs=92.2
Q ss_pred cccCCCCCcEEEEeCC----eEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHh
Q 007317 336 SDHVDDLADVCVRVDK----KIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY 411 (608)
Q Consensus 336 ~~~~~~~~Dv~l~~~~----~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiY 411 (608)
+++++.+|||+|++++ +.|+|||.||++||+||++||.+ .|.| +. .+|.++++++++|+.+|+|+|
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~--~~~e-------~~-~~i~l~~~~~~~f~~~l~~iY 71 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYG--DLAE-------VK-SEIHIPDVEPAAFLILLKYMY 71 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC---------------C-CEEEETTSCHHHHHHHHHHHH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcC--Cccc-------CC-CeEEeCCCCHHHHHHHHHHHc
Confidence 5678999999999988 89999999999999999999998 5554 34 689999999999999999999
Q ss_pred cCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 412 TDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 412 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
||.+. ++.+ ++.+++.+|++|+++.|+..|+++|.+++
T Consensus 72 t~~~~-~~~~-------------------------~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 72 SDEID-LEAD-------------------------TVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp HCCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CCCcc-CCHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 99996 8888 99999999999999999999999998754
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.87 E-value=8.3e-22 Score=173.62 Aligned_cols=112 Identities=20% Similarity=0.297 Sum_probs=101.6
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceec-CCCCHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEE-HDLSKETFE 404 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l-~~~~~~~~~ 404 (608)
.+..++.|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ .|.| ...+|.+ +++++++|+
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~--~~~e--------~~~~i~l~~~~~~~~f~ 82 (127)
T 1r29_A 13 ASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTD--QLKR--------NLSVINLDPEINPEGFN 82 (127)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTS--TTTT--------TCSEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcC--CccC--------CCCEEEeCCCCCHHHHH
Confidence 3455677888899999999999999999999999999999999999998 4444 3478999 999999999
Q ss_pred HHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHh
Q 007317 405 KMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLL 473 (608)
Q Consensus 405 ~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~ 473 (608)
.+|+|+|||.+. ++.+ ++.+++.+|++|+++.|+..|+++|.+
T Consensus 83 ~ll~~~Ytg~~~-~~~~-------------------------~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 83 ILLDFMYTSRLN-LREG-------------------------NIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcC-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 999999999996 8888 999999999999999999999999975
No 9
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.86 E-value=5e-22 Score=172.80 Aligned_cols=109 Identities=15% Similarity=0.183 Sum_probs=98.0
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ 405 (608)
....++.|+.++.++.+|||+|.++|++|+|||.||+++|+||++||.+ +| ..+|.++++++++|+.
T Consensus 8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~-----------~~~i~l~~~~~~~f~~ 74 (119)
T 3b84_A 8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGD--GS-----------GGSVVLPAGFAEIFGL 74 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT--TT-----------CCCEEECGGGHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCC--CC-----------CCeEEeCCCCHHHHHH
Confidence 3445677888899999999999999999999999999999999999997 22 3579999999999999
Q ss_pred HHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHh
Q 007317 406 MIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLL 473 (608)
Q Consensus 406 ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~ 473 (608)
+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.+
T Consensus 75 ll~~iYtg~~~-~~~~-------------------------~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 75 LLDFFYTGHLA-LTSG-------------------------NRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HHHHHcCCCCc-cCHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999996 8888 999999999999999999999999865
No 10
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.86 E-value=3.6e-22 Score=178.48 Aligned_cols=113 Identities=22% Similarity=0.352 Sum_probs=102.1
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC-CCCHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFE 404 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~~~~~~~~ 404 (608)
....++.|+.++.++.+|||+|+++|+.|+|||.||++||+||++||.+ .|.+ ..+|.++ ++++++|+
T Consensus 20 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~~e---------~~~i~l~~~v~~~~~~ 88 (138)
T 2z8h_A 20 STNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVG--QTDA---------ELTVTLPEEVTVKGFE 88 (138)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT--CCCT---------TEEEECCTTSCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhc--CCCC---------CceEEeCCCCCHHHHH
Confidence 3445677888889999999999999999999999999999999999998 4443 2478885 89999999
Q ss_pred HHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 405 KMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 405 ~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
.+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.+.+
T Consensus 89 ~lL~~~Ytg~~~-i~~~-------------------------~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 89 PLIQFAYTAKLI-LSKD-------------------------NVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp HHHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred HHHHHhcCCCcc-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 999999999996 8888 99999999999999999999999999888
No 11
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.86 E-value=1.1e-21 Score=171.31 Aligned_cols=110 Identities=24% Similarity=0.292 Sum_probs=99.6
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ 405 (608)
.+..++.++.++.++.+|||+|.++|+.|+|||.||++||+||++||.+ ...+|.++++++++|+.
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--------------~~~~i~l~~~~~~~f~~ 77 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHR--------------NSQHYTLDFLSPKTFQQ 77 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTS--------------CCSEEEECSSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcC--------------CCcEEEeCCCCHHHHHH
Confidence 3445667788889999999999999999999999999999999999986 13579999999999999
Q ss_pred HHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 406 MIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 406 ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.+.|
T Consensus 78 ll~~~Ytg~~~-~~~~-------------------------~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 78 ILEYAYTATLQ-AKAE-------------------------DLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp HHHHHHHSCCC-CCGG-------------------------GHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHhhcCCCcC-CCHH-------------------------HHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 99999999996 8888 99999999999999999999999997653
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=176.51 Aligned_cols=115 Identities=17% Similarity=0.293 Sum_probs=98.8
Q ss_pred hhhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHH
Q 007317 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (608)
Q Consensus 324 ~~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~ 403 (608)
......++.|+.++.++.+|||+|+++|+.|+|||.||++||+||++||.+ .|.+. ++...+|.++++++++|
T Consensus 29 ~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~--~~~e~-----e~~~~~I~l~~v~~~~f 101 (144)
T 2ppi_A 29 QHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNY--NPPKD-----DGSTYKIELEGISVMVM 101 (144)
T ss_dssp THHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH--CC----------CCCEEECCSSCHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcC--CCccc-----cCCCcEEEeCCCCHHHH
Confidence 444456778888999999999999999999999999999999999999998 45432 23457899999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHH
Q 007317 404 EKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVL 471 (608)
Q Consensus 404 ~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l 471 (608)
+.+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|
T Consensus 102 ~~lL~fiYtg~~~-i~~~-------------------------~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 102 REILDYIFSGQIR-LNED-------------------------TIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHTTSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCC-CCHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 9999999999996 8888 9999999999999999999999876
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=1.7e-21 Score=168.67 Aligned_cols=107 Identities=22% Similarity=0.289 Sum_probs=96.6
Q ss_pred cchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC--CCCHHHHH
Q 007317 327 SSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH--DLSKETFE 404 (608)
Q Consensus 327 ~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~--~~~~~~~~ 404 (608)
...++.|+.++.++.+|||+|.++|+.|+|||.||++||+||++||.+ + ....|.++ ++++++|+
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~---------~----~~~~i~l~~~~~~~~~f~ 73 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRS---------T----SENNVFLDQSQVKADGFQ 73 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTT---------C----CCSCEECCTTTCCHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcC---------C----CCCeEEeecCCCCHHHHH
Confidence 344667788889999999999999999999999999999999999997 1 23567777 99999999
Q ss_pred HHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHH
Q 007317 405 KMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLL 472 (608)
Q Consensus 405 ~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~ 472 (608)
.+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.
T Consensus 74 ~ll~~~Yt~~~~-~~~~-------------------------~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 74 KLLEFIYTGTLN-LDSW-------------------------NVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHcCCCcc-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999999996 8888 99999999999999999999999984
No 14
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.85 E-value=7.9e-22 Score=175.45 Aligned_cols=112 Identities=14% Similarity=0.173 Sum_probs=98.2
Q ss_pred hhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHH
Q 007317 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFE 404 (608)
Q Consensus 325 ~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~ 404 (608)
.....++.|+.++.++.+|||+|+++|+.|+|||.||+++|+||++||.+ .| ..+|.++++++++|+
T Consensus 8 h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~--~~-----------~~~i~l~~~~~~~f~ 74 (135)
T 2yy9_A 8 HSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGD--GT-----------GGSVVLPAGFAEIFG 74 (135)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------------CCEEECGGGHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcC--CC-----------CCeEEeCCCCHHHHH
Confidence 34455677888999999999999999999999999999999999999997 32 357999999999999
Q ss_pred HHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhc
Q 007317 405 KMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHL 475 (608)
Q Consensus 405 ~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l 475 (608)
.+|+|||||++. ++.+ ++.+++.+|++|+++.|+..|+++|.+.+
T Consensus 75 ~lL~fiYtg~~~-i~~~-------------------------~v~~ll~~A~~l~i~~L~~~C~~~l~~~l 119 (135)
T 2yy9_A 75 LLLDFFYTGHLA-LTSG-------------------------NRDQVLLAAKELRVPEAVELCQSFQPQTS 119 (135)
T ss_dssp HHHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHCCC---
T ss_pred HHHHHHhCCCCC-CCHH-------------------------HHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 999999999996 8888 99999999999999999999999998877
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.85 E-value=2e-21 Score=168.92 Aligned_cols=107 Identities=21% Similarity=0.330 Sum_probs=97.7
Q ss_pred hcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHH
Q 007317 326 LSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEK 405 (608)
Q Consensus 326 l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ 405 (608)
....++.|+.++.++.+|||+|.++|+.|+|||.||++||+||++||.+ ...+|.++++++++|+.
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~--------------~~~~i~l~~~~~~~f~~ 76 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVD--------------QKDVVHLDISNAAGLGQ 76 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHH--------------CCSGGGGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcC--------------CCCEEEeCCCCHHHHHH
Confidence 3445677888899999999999999999999999999999999999986 12578899999999999
Q ss_pred HHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHH
Q 007317 406 MIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLL 472 (608)
Q Consensus 406 ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~ 472 (608)
+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.
T Consensus 77 ll~~~Ytg~~~-i~~~-------------------------~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 77 VLEFMYTAKLS-LSPE-------------------------NVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHSCCC-CCTT-------------------------THHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCCCc-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999996 8888 99999999999999999999999984
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.83 E-value=1.5e-21 Score=171.45 Aligned_cols=111 Identities=23% Similarity=0.330 Sum_probs=98.9
Q ss_pred hhhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCC-CCHHH
Q 007317 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHD-LSKET 402 (608)
Q Consensus 324 ~~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~-~~~~~ 402 (608)
+.....++.|+.++.++.+|||+|+++|+.|+|||.||+++|+||++||.+ .|.| ...|.+++ +++++
T Consensus 14 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~--~~~e---------~~~i~l~~~~~~~~ 82 (125)
T 3ohu_A 14 VHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVG--QTKN---------DLVVSLPEEVTARG 82 (125)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTT--CCCS---------SCEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcC--CCCC---------CcEEEeCCCCCHHH
Confidence 344456777888899999999999999999999999999999999999998 4433 36799998 99999
Q ss_pred HHHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHH
Q 007317 403 FEKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVL 471 (608)
Q Consensus 403 ~~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l 471 (608)
|+.+|+|+|||++. ++.+ ++.+++.+|++|+++.|++.|+++|
T Consensus 83 f~~~l~~iYtg~~~-~~~~-------------------------~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 83 FGPLLQFAYTAKLL-LSRE-------------------------NIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHHHHHHTTSEEE-ECTT-------------------------THHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHHHHHhHcCCceE-ECHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999996 8888 9999999999999999999998653
No 17
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.82 E-value=4.2e-21 Score=169.48 Aligned_cols=111 Identities=19% Similarity=0.298 Sum_probs=93.9
Q ss_pred hhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC-CCCHHHH
Q 007317 325 KLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETF 403 (608)
Q Consensus 325 ~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~~~~~~~ 403 (608)
.....+..|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ + ...+|.++ ++++++|
T Consensus 16 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~---------~----~~~~i~l~~~~~~~~f 82 (129)
T 3ga1_A 16 FGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNN---------S----RSAVVELPAAVQPQSF 82 (129)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHH---------C----CCSEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcC---------C----CCCEEEECCCCCHHHH
Confidence 33445677888899999999999999999999999999999999999997 1 34689996 8999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhh
Q 007317 404 EKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLH 474 (608)
Q Consensus 404 ~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~ 474 (608)
+.+|+|+|||++. ++.+ ++.+++.+|++|+++.|++.|+++|.+.
T Consensus 83 ~~ll~~iYtg~~~-i~~~-------------------------~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 83 QQILSFCYTGRLS-MNVG-------------------------DQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp HHHHHHHHHSEEE-CCTT-------------------------THHHHHHHHHHTTBTTSSCC--------
T ss_pred HHHHHHHhCCccc-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999996 8888 9999999999999999999999999764
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.82 E-value=1.7e-21 Score=170.73 Aligned_cols=109 Identities=22% Similarity=0.352 Sum_probs=95.7
Q ss_pred cchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecC-CCCHHHHHH
Q 007317 327 SSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEH-DLSKETFEK 405 (608)
Q Consensus 327 ~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~-~~~~~~~~~ 405 (608)
+..++.|+.++.++.+|||+|.++|+.|+|||.||++||+||++||.+ .|.|+ .+|.++ ++++++|+.
T Consensus 14 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~--~~~e~---------~~i~l~~~v~~~~f~~ 82 (124)
T 2ihc_A 14 TNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVG--QADGE---------LNITLPEEVTVKGFEP 82 (124)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTT--C---C---------EEEECCTTSCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcC--CCCCC---------ceEeecCCcCHHHHHH
Confidence 345667788889999999999999999999999999999999999998 44432 478884 899999999
Q ss_pred HHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHH
Q 007317 406 MIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLL 472 (608)
Q Consensus 406 ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~ 472 (608)
+|+|+|||++. ++.+ ++.+++.+|++|+++.|+..|+++|.
T Consensus 83 lL~~iYtg~~~-i~~~-------------------------~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 83 LIQFAYTAKLI-LSKE-------------------------NVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHHHSEEE-EETT-------------------------THHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHHHhcCCCcc-cCHH-------------------------HHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999995 8888 99999999999999999999998864
No 19
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=167.50 Aligned_cols=124 Identities=20% Similarity=0.259 Sum_probs=115.0
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++.+.....|.++++++++|..+|+|+|||++.++.+++.+++.+
T Consensus 32 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~~~~~~~ll~~ 111 (172)
T 3htm_A 32 SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAA 111 (172)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHH
T ss_pred CCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 44679999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 248 CKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 248 A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
|+.++++.|.+.+. |++.++.+|..++++.|.+.|.+|+.+||.
T Consensus 112 A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 112 ADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 98888887777654 488999999999999999999999999985
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.79 E-value=1.9e-19 Score=155.45 Aligned_cols=103 Identities=19% Similarity=0.311 Sum_probs=91.7
Q ss_pred hhhcchHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHH
Q 007317 324 CKLSSSVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETF 403 (608)
Q Consensus 324 ~~l~~~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~ 403 (608)
+.....++.|+.++.++.+|||+|.++|+.|+|||.||+++|+||++||.+ + ..+|.++++++++|
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~---------~-----~~~i~l~~~~~~~f 78 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSV---------A-----GQVVELSFIRAEIF 78 (116)
T ss_dssp THHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTS---------C-----CSEEEECSSCHHHH
T ss_pred cHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcC---------C-----CCEEEeCCCCHHHH
Confidence 334455677888899999999999999999999999999999999999987 1 35899999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHH
Q 007317 404 EKMIEYMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKR 465 (608)
Q Consensus 404 ~~ll~yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~ 465 (608)
+.+|+|+|||++..++.+ ++.+++.+|++|+++.|+.
T Consensus 79 ~~~l~~~Ytg~~~~~~~~-------------------------~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 79 AEILNYIYSSKIVRVRSD-------------------------LLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHTTSCCCSCCHH-------------------------HHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHhhcCCCcCCCCHH-------------------------HHHHHHHHHHHhCccccCc
Confidence 999999999999437777 9999999999999999874
No 21
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.78 E-value=6.5e-19 Score=163.11 Aligned_cols=121 Identities=26% Similarity=0.314 Sum_probs=113.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 26 ~Gadvn~~d~~g~t~l--------~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn 97 (169)
T 4gpm_A 26 NGADVNASDSDGRTPL--------HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 97 (169)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 4999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.+|..|.| +|+++. +.+++++|+.+|++++. ++..|.|||++|+..++.
T Consensus 98 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~--~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 98 AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT--SDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCCH
Confidence 99999998 577777 89999999999998876 788999999999986654
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.78 E-value=4.5e-19 Score=175.82 Aligned_cols=126 Identities=16% Similarity=0.232 Sum_probs=106.4
Q ss_pred CCCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccC--cCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHH
Q 007317 166 SDSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWR--YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMED 243 (608)
Q Consensus 166 ~~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~--e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ 243 (608)
.++.+|||++.++|+.|+|||.||+++|+||++||.+++. ++....|.++++++.+|..+++|+|||++.++.+++.+
T Consensus 27 ~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~~~~v~~ 106 (256)
T 3hve_A 27 EESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQD 106 (256)
T ss_dssp C--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC-CCHHH
T ss_pred hcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCcccHhHHHH
Confidence 3455779999999999999999999999999999998876 56778999999999999999999999999999999999
Q ss_pred HHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 244 LVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 244 ll~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
++.+|..++++.|.+.+. ||+.++.+|..++++.|.+.|..|+.+||.
T Consensus 107 ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 164 (256)
T 3hve_A 107 VVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFR 164 (256)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 999998888777777654 588999999999999999999999999985
No 23
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.78 E-value=1.5e-19 Score=156.59 Aligned_cols=99 Identities=19% Similarity=0.247 Sum_probs=86.9
Q ss_pred hHHhhcccccCCCCCcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHH
Q 007317 329 SVEAMHISDHVDDLADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIE 408 (608)
Q Consensus 329 ~~~~l~~~~~~~~~~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~ 408 (608)
.++.|+ +.++.+|||+|.++|+.|+|||+|||++|+||++ . ...|.++++++++|+.+|+
T Consensus 19 ~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--~----------------~~~i~l~~v~~~~f~~ll~ 78 (119)
T 3m5b_A 19 LVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--R----------------GQWALGEGISPSTFAQLLN 78 (119)
T ss_dssp HHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--C----------------EEEECCSSCCHHHHHHHHH
T ss_pred HHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--C----------------CCEEEeCCCCHHHHHHHHH
Confidence 344443 5678999999999999999999999999999974 1 1478999999999999999
Q ss_pred HHhcCCCCCCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHh
Q 007317 409 YMYTDGLKDIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLL 473 (608)
Q Consensus 409 yiYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~ 473 (608)
|+|||++. ++.+ ++.+++.+|++|+++.|++.|++++..
T Consensus 79 fiYtg~~~-i~~~-------------------------~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 79 FVYGESVE-LQPG-------------------------ELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHTTCCEE-ECGG-------------------------GHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHcCCCcC-cCHH-------------------------HHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 99999996 8888 999999999999999999999998764
No 24
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.76 E-value=1.2e-18 Score=174.98 Aligned_cols=132 Identities=14% Similarity=0.248 Sum_probs=109.3
Q ss_pred CCCCCeeEEec---CeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcC------CCCHHHHHHHHHHHhcCccccCh
Q 007317 168 SFPPDVVFYVQ---GRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE------KLSYPALYGLIHFFYSDRLEIAV 238 (608)
Q Consensus 168 ~~~~Dv~~~v~---~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~------~v~~~~~~~lL~ylYtg~~~i~~ 238 (608)
+.+|||++.++ |+.|+|||.||+++|+||++||.+++.++....|.++ ++++++|..+|+|+|||++.++.
T Consensus 30 ~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~ 109 (279)
T 3i3n_A 30 GLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST 109 (279)
T ss_dssp TTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET
T ss_pred CCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH
Confidence 44679999998 8999999999999999999999999999988899998 89999999999999999999999
Q ss_pred hhHHHHHHHHhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--CCCCCCcc
Q 007317 239 DDMEDLVKICKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA--LPEEDRLP 299 (608)
Q Consensus 239 ~~~~~ll~~A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~--~~~~~~l~ 299 (608)
+++.+++.+|..++++.|.+.+. ||+.++.+|..++++.|.+.|..|+.+||. +...+++.
T Consensus 110 ~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~ 182 (279)
T 3i3n_A 110 GSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYT 182 (279)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGG
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhc
Confidence 99999999997777666666543 589999999999999999999999999986 24444443
No 25
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.74 E-value=1.1e-17 Score=170.77 Aligned_cols=124 Identities=20% Similarity=0.259 Sum_probs=110.8
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.++||+|.++|+.|+|||.||++||+||++||.+++.+.....|.++++++++|+.+|+|+|||.++++.+++.+++.+
T Consensus 172 ~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~ll~~ 251 (312)
T 3hqi_A 172 SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAA 251 (312)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTHHHHHHHHHHH
T ss_pred CCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHH
Confidence 45679999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Q 007317 248 CKVCKCESLQRIIE----------KELIHQKYAEYKALRDVDNSQKRFILQGSA 291 (608)
Q Consensus 248 A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~ 291 (608)
|+.++++.|...++ ++..++.+|..+++..|.+.|.+|+..|+.
T Consensus 252 A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 252 ADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred HHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99888888887765 478899999999999999999999999974
No 26
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.73 E-value=2.6e-18 Score=154.89 Aligned_cols=112 Identities=21% Similarity=0.271 Sum_probs=87.1
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++.++....|.++++++++|..+|+|+|||.+.++.+++.+++.+
T Consensus 23 ~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~ll~~ 102 (145)
T 4eoz_A 23 SRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAA 102 (145)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTGGGTHHHHHHH
T ss_pred CCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCcHHHHHHHHHH
Confidence 34679999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred HhHhcHHHHHHHHH----------HHHHHHHHHHHcCCHHHH
Q 007317 248 CKVCKCESLQRIIE----------KELIHQKYAEYKALRDVD 279 (608)
Q Consensus 248 A~~c~~~~L~~~l~----------~~l~~~~~A~~~~~~~L~ 279 (608)
|..++++.|.+.+. |++.++.+|..|++..|+
T Consensus 103 A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk 144 (145)
T 4eoz_A 103 ADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLK 144 (145)
T ss_dssp HHHTTCHHHHHHHHCC--------------------------
T ss_pred HHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhc
Confidence 98888888877654 578888899999887765
No 27
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.73 E-value=1.3e-17 Score=142.52 Aligned_cols=94 Identities=21% Similarity=0.310 Sum_probs=77.0
Q ss_pred CCCCCCCeeEEecC----eeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhH
Q 007317 166 SDSFPPDVVFYVQG----RPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDM 241 (608)
Q Consensus 166 ~~~~~~Dv~~~v~~----~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~ 241 (608)
.++.+|||++.++| +.|+|||.||+++|+||++||.+++.++. ..|.++++++++|..+|+|+|||.+.++.+++
T Consensus 4 ~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~~~ 82 (109)
T 2vkp_A 4 NNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEADTV 82 (109)
T ss_dssp TCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCTTTH
T ss_pred cCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCHHHH
Confidence 45678899999988 89999999999999999999999998887 89999999999999999999999999999998
Q ss_pred HHHHHHHhHhcHHHHHHHH
Q 007317 242 EDLVKICKVCKCESLQRII 260 (608)
Q Consensus 242 ~~ll~~A~~c~~~~L~~~l 260 (608)
.+++.+|+.++++.|.+.+
T Consensus 83 ~~ll~~A~~~~~~~L~~~c 101 (109)
T 2vkp_A 83 LATLYAAKKYIVPALAKAC 101 (109)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHH
Confidence 8887777666554444443
No 28
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.73 E-value=1.1e-17 Score=145.50 Aligned_cols=95 Identities=22% Similarity=0.413 Sum_probs=81.8
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||++||+||++||.+++.++....|.++++++++|..+|+|+|||++.++.+++.+++.+
T Consensus 23 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~~~~~~~ll~~ 102 (120)
T 2if5_A 23 GLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVSTANVGDILSA 102 (120)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHH
T ss_pred CCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHH
Confidence 45679999999999999999999999999999999999988889999999999999999999999999999999999998
Q ss_pred HhHhcHHHHHHHHHH
Q 007317 248 CKVCKCESLQRIIEK 262 (608)
Q Consensus 248 A~~c~~~~L~~~l~~ 262 (608)
|+.++++.|.+.+..
T Consensus 103 A~~~~i~~L~~~C~~ 117 (120)
T 2if5_A 103 ARLLEIPAVSHVCAD 117 (120)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHH
Confidence 888877766666543
No 29
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.72 E-value=2.8e-17 Score=146.20 Aligned_cols=118 Identities=27% Similarity=0.350 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|+|+ .+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 G~d~-~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 71 (137)
T 3c5r_A 1 GIDP-FTNHRGETLL--------HIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71 (137)
T ss_dssp ---C-CCCTTCCCHH--------HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCC-CcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC
Confidence 5677 6899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..+.
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA--VNIFGLRPVDYTDDESM 121 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCGGGGCCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHhhccH
Confidence 9999998 577776 89999999999988776 78899999999987433
No 30
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.71 E-value=3.6e-17 Score=143.79 Aligned_cols=93 Identities=19% Similarity=0.280 Sum_probs=82.4
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEc-CCCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR-EKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l-~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++.+ ....|.+ +++++++|..+|+|+|||.+.++.+++.+++.
T Consensus 27 ~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~ 105 (127)
T 1r29_A 27 DILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIMAVMA 105 (127)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred CCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHH
Confidence 446799999999999999999999999999999999888 7778999 99999999999999999999999999998888
Q ss_pred HHhHhcHHHHHHHHH
Q 007317 247 ICKVCKCESLQRIIE 261 (608)
Q Consensus 247 ~A~~c~~~~L~~~l~ 261 (608)
+|..++++.|.+.+.
T Consensus 106 ~A~~~~i~~L~~~c~ 120 (127)
T 1r29_A 106 TAMYLQMEHVVDTCR 120 (127)
T ss_dssp HHHHTTCHHHHHHHH
T ss_pred HHHHhCCHHHHHHHH
Confidence 887775555555444
No 31
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.70 E-value=1.7e-17 Score=147.48 Aligned_cols=119 Identities=23% Similarity=0.149 Sum_probs=110.2
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
++++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++.
T Consensus 2 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~ 72 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGL--------ATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC 72 (136)
T ss_dssp CCCCSCCCCCCSCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC
T ss_pred CCCccCCCCCCccHH--------HHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC
Confidence 678999999999999 99999999999999999999999999999999999999 999999999999999999
Q ss_pred ccCC-CCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFD-GDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~-g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|.. |.| +|+++. +.+++++|+.+|+++.. .+..|.||+|+|+..++.
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV--CDAWGRLPVDLAEEQGHR 124 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC--CSSSSSCHHHHHHHHTCH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--cCCCCCCHHHHHHHcCCH
Confidence 9999 888 577777 89999999999988766 778999999999976553
No 32
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.70 E-value=4.3e-17 Score=146.35 Aligned_cols=95 Identities=18% Similarity=0.299 Sum_probs=82.1
Q ss_pred CCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCc--CcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHH
Q 007317 167 DSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRY--RNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDL 244 (608)
Q Consensus 167 ~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e--~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~l 244 (608)
++.+|||+|.++|+.|+|||.||++||+||++||.+++.+ +....|.++++++++|..+|+|+|||.+.++.+++.++
T Consensus 44 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~~~~v~~l 123 (144)
T 2ppi_A 44 ESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLNEDTIQDV 123 (144)
T ss_dssp --CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCCTTTHHHH
T ss_pred cCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHH
Confidence 4557799999999999999999999999999999988765 56778999999999999999999999999999999999
Q ss_pred HHHHhHhcHHHHHHHHH
Q 007317 245 VKICKVCKCESLQRIIE 261 (608)
Q Consensus 245 l~~A~~c~~~~L~~~l~ 261 (608)
+.+|..++++.|.+.+.
T Consensus 124 l~~A~~l~i~~L~~~C~ 140 (144)
T 2ppi_A 124 VQAADLLLLTDLKTLCC 140 (144)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHH
Confidence 99998887776666554
No 33
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.68 E-value=4.3e-17 Score=141.43 Aligned_cols=90 Identities=16% Similarity=0.183 Sum_probs=78.8
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||++.++.+++.+++.+
T Consensus 22 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~~~~v~~ll~~ 97 (119)
T 3b84_A 22 GQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLA 97 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHHH
T ss_pred CCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHH
Confidence 4467999999999999999999999999999998876 456888999999999999999999999999999988888
Q ss_pred HhHhcHHHHHHHHH
Q 007317 248 CKVCKCESLQRIIE 261 (608)
Q Consensus 248 A~~c~~~~L~~~l~ 261 (608)
|+.++++.|.+.+.
T Consensus 98 A~~~~i~~L~~~C~ 111 (119)
T 3b84_A 98 ARELRVPEAVELCQ 111 (119)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhCcHHHHHHHH
Confidence 87776665555544
No 34
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.68 E-value=1.1e-16 Score=148.10 Aligned_cols=102 Identities=26% Similarity=0.362 Sum_probs=92.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 59 ~gad~~~~d~~g~TpL--------h~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~ 130 (169)
T 4gpm_A 59 KGADVNAKDSDGRTPL--------HHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN 130 (169)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cccchhhhccCCCCHH--------HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 4999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhcCCCC
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYEARPP 123 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~ 123 (608)
..|..|.|| ++|+. +.+++++|+++|++..
T Consensus 131 ~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 131 TSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 999999985 66666 8999999999998764
No 35
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.68 E-value=2.1e-16 Score=147.32 Aligned_cols=121 Identities=24% Similarity=0.194 Sum_probs=111.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.+.+++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 28 ~~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 99 (179)
T 3f6q_A 28 TENDLNQGDDHGFSPL--------HWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADIN 99 (179)
T ss_dssp TTSCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CcccccccCCCCCCHH--------HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3778999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+...+.
T Consensus 100 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 100 AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI--CNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB--CCTTSCCGGGGSCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch--hccCCCCcHHHHHHHHHH
Confidence 99999998 577766 89999999999988776 788999999999875543
No 36
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.67 E-value=2.3e-16 Score=145.71 Aligned_cols=121 Identities=26% Similarity=0.352 Sum_probs=112.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 36 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 107 (169)
T 2y1l_E 36 NGADVNAEDASGWTPL--------HLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN 107 (169)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 108 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 108 ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA--QDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHhCCH
Confidence 99999998 577776 89999999999988766 778899999999976653
No 37
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.67 E-value=4.2e-16 Score=143.07 Aligned_cols=118 Identities=25% Similarity=0.291 Sum_probs=109.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.+.+++..+..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 31 ~~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 102 (165)
T 3twr_A 31 QSVNCRDIEGRQSTPL--------HFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVN 102 (165)
T ss_dssp TTTTCCCTTTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCccccccCCCCHH--------HHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC
Confidence 4677888899999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
..|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..
T Consensus 103 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~a~~~ 151 (165)
T 3twr_A 103 VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK--KNRDGNTPLDLVKDG 151 (165)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCTGGGSCTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc--cCCCCCChhHhHhcC
Confidence 99999998 577776 89999999999988776 788999999998873
No 38
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=137.14 Aligned_cols=90 Identities=17% Similarity=0.289 Sum_probs=77.1
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcC--CCCHHHHHHHHHHHhcCccccChhhHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE--KLSYPALYGLIHFFYSDRLEIAVDDMEDLV 245 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~--~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll 245 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.++ ....|.++ ++++++|+.+|+|+|||++.++.+++.+++
T Consensus 20 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~~~v~~ll 95 (116)
T 2vpk_A 20 GFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIH 95 (116)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCTTTHHHHH
T ss_pred CCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCHHHHHHHH
Confidence 446799999999999999999999999999999876 23445565 999999999999999999999999999988
Q ss_pred HHHhHhcHHHHHHHHH
Q 007317 246 KICKVCKCESLQRIIE 261 (608)
Q Consensus 246 ~~A~~c~~~~L~~~l~ 261 (608)
.+|..++++.|.+.+.
T Consensus 96 ~~A~~~~i~~L~~~C~ 111 (116)
T 2vpk_A 96 QAADYLKVEEVVTKCK 111 (116)
T ss_dssp HHHHHTTCHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHH
Confidence 8888776666555554
No 39
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.67 E-value=2e-16 Score=137.63 Aligned_cols=90 Identities=23% Similarity=0.389 Sum_probs=78.9
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||++.++.+++.+++.+
T Consensus 26 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~~~~~~~ll~~ 100 (121)
T 1buo_A 26 GTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDDLLYA 100 (121)
T ss_dssp TTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCCGGGHHHHHHH
T ss_pred CCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCCcCCCHHHHHHHHHH
Confidence 446799999999999999999999999999999763 457888999999999999999999999999999999988
Q ss_pred HhHhcHHHHHHHHHH
Q 007317 248 CKVCKCESLQRIIEK 262 (608)
Q Consensus 248 A~~c~~~~L~~~l~~ 262 (608)
|+.++++.|.+.+..
T Consensus 101 A~~~~i~~L~~~c~~ 115 (121)
T 1buo_A 101 AEILEIEYLEEQCLK 115 (121)
T ss_dssp HHHHTCHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHH
Confidence 887766666655544
No 40
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.66 E-value=1.2e-16 Score=141.88 Aligned_cols=85 Identities=19% Similarity=0.211 Sum_probs=71.7
Q ss_pred CCCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 167 DSFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 167 ~~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
++.+|||+|.++|+.|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 22 ~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~~~~v~~ll~ 97 (135)
T 2yy9_A 22 KGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLL 97 (135)
T ss_dssp TTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred cCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 34567999999999999999999999999999999876 45688899999999999999999999999999888887
Q ss_pred HHhHhcHHH
Q 007317 247 ICKVCKCES 255 (608)
Q Consensus 247 ~A~~c~~~~ 255 (608)
+|+.++++.
T Consensus 98 ~A~~l~i~~ 106 (135)
T 2yy9_A 98 AAKELRVPE 106 (135)
T ss_dssp HHHHTTCHH
T ss_pred HHHHhCcHH
Confidence 776664433
No 41
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.66 E-value=2.9e-16 Score=142.35 Aligned_cols=119 Identities=22% Similarity=0.276 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++ .+..|+||| |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.
T Consensus 25 g~~~~-~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 95 (153)
T 1awc_B 25 GAPFT-TDWLGTSPL--------HLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA 95 (153)
T ss_dssp TCCCC-CCTTCCCHH--------HHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC
T ss_pred CCCCC-cCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCC
Confidence 66666 588999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 96 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 96 KDMLKMTALHWATEHNHQEVVELLIKYGADVHT--QSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcCCH
Confidence 9999998 577766 89999999999988776 788999999999986653
No 42
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.66 E-value=2.7e-16 Score=144.69 Aligned_cols=120 Identities=23% Similarity=0.333 Sum_probs=111.5
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|.+++.+|..|+||| |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.
T Consensus 26 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 97 (167)
T 3v31_A 26 ENVINHTDEEGFTPL--------MWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97 (167)
T ss_dssp SSCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred CCCcCCCCCCCCCHH--------HHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 788999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 98 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~~ 148 (167)
T 3v31_A 98 YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI--ETDSGYNSMDLAVALGYR 148 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCcH
Confidence 9999998 567766 89999999999988876 788899999999986664
No 43
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.66 E-value=2.7e-16 Score=156.98 Aligned_cols=127 Identities=20% Similarity=0.258 Sum_probs=80.5
Q ss_pred CCCCCCCCCCCCCCCCC-------------------------CCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCc
Q 007317 14 DEIDLDASDFSSSVPLK-------------------------KVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSV 68 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~-------------------------~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~t 68 (608)
.|+++|.+|.+|+|||+ ......+|+|+..++.++++.|+++|+++|.+|..|+|
T Consensus 75 ~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~T 154 (269)
T 4b93_B 75 SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNT 154 (269)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCC
Confidence 48899999999999982 01122234444444444444445555566666666777
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 69 ALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 69 pLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
|||+|+..|+.+++++|+++|++++..+..|.| +|+|+. +.+++++|+.+|++++. .+..|.||||+|+..+
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~--~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV--LNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC--CCTTSCCSGGGSCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHhCC
Confidence 777777777777777777777777777776666 355555 66677777776666554 5666777777766533
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.65 E-value=3.5e-16 Score=147.55 Aligned_cols=120 Identities=22% Similarity=0.218 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 58 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 129 (192)
T 2rfm_A 58 FDKLEDKDIEGSTAL--------IWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND 129 (192)
T ss_dssp HCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC
T ss_pred ccccccccccCccHH--------HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 667777788888888 888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 130 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 130 RNLEGETPLIVASKYGRSEIVKKLLELGADISA--RDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC--BCTTSCBHHHHHHHTTCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhCcH
Confidence 8888877 466655 77788888888777665 667788888888765553
No 45
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.65 E-value=4.7e-16 Score=142.12 Aligned_cols=120 Identities=23% Similarity=0.187 Sum_probs=110.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+. |+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 27 ~~~~~~~~~~~g~t~L--------~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 97 (162)
T 1ihb_A 27 NNVNVNAQNGFGRTAL--------QVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97 (162)
T ss_dssp SCCCTTCCCTTSCCHH--------HHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCccccCccCccHH--------HHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4899999999999999 99999 99999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCC-CCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARP-PPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~-~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|.| +|+++. +.+++++|+.++... .. .+..|.||+|+|+..++.
T Consensus 98 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~t~l~~A~~~~~~ 150 (162)
T 1ihb_A 98 IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH--RNHKGDTACDLARLYGRN 150 (162)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC--cCCCCCcHHHHHHHcCCH
Confidence 99999998 577776 899999999999874 44 678899999999986654
No 46
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.65 E-value=2.4e-16 Score=140.60 Aligned_cols=99 Identities=19% Similarity=0.364 Sum_probs=82.9
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcC-CCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE-KLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~-~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
+.+|||+|.++|+.|+|||.||++||+||++||.+++.+. ..|.++ ++++++|..+|+|+|||++.++.+++.+++.
T Consensus 34 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~~~v~~ll~ 111 (138)
T 2z8h_A 34 DVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTAKLILSKDNVDEVCR 111 (138)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHH
T ss_pred CCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCCCcccCHHHHHHHHH
Confidence 3467999999999999999999999999999999888663 467774 8999999999999999999999999888877
Q ss_pred HHhHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 007317 247 ICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGS 290 (608)
Q Consensus 247 ~A~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~ 290 (608)
+|..+ +++.|.+.|.+|+.++.
T Consensus 112 ~A~~~----------------------~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 112 CVEFL----------------------SVHNIEESCFQFLKFKF 133 (138)
T ss_dssp HHHHH----------------------TCGGGHHHHHHHTTCCC
T ss_pred HHHHh----------------------CCHHHHHHHHHHHHHhc
Confidence 77655 45556666666665543
No 47
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.65 E-value=6.3e-16 Score=140.41 Aligned_cols=119 Identities=21% Similarity=0.144 Sum_probs=108.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.+.+++.+|..|+||| |+ +..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 25 ~~~~~~~~~~~g~t~L--------~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 95 (156)
T 1bd8_A 25 ELVHPDALNRFGKTAL--------QV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVN 95 (156)
T ss_dssp TCCCTTCCCTTSCCHH--------HH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred hCcCccccCCCCCcHH--------HH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 4679999999999999 99 99999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|.| +|+++. +.+++++|+.+ .++.. .+..|.||+++|+..++.
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~--~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 96 VPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR--RDARGLTPLELALQRGAQ 146 (156)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC--CCTTSCCHHHHHHHSCCH
T ss_pred CcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC--cCCCCCCHHHHHHHcCcH
Confidence 99999998 577776 89999999988 66554 788999999999986654
No 48
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.65 E-value=3.8e-16 Score=136.08 Aligned_cols=109 Identities=20% Similarity=0.124 Sum_probs=98.5
Q ss_pred CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc
Q 007317 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR 101 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~ 101 (608)
+..|.||| |+|+..|+.++++.|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|
T Consensus 4 ~~~~~~~l--------~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 75 (123)
T 3aaa_C 4 GSMCDKEF--------MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT 75 (123)
T ss_dssp ---CHHHH--------HHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCC
T ss_pred ccccchHH--------HHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 45677777 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 102 -~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
+|+++. +.+++++|+.+|+++.. .+..|.||+++|+.
T Consensus 76 pL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLSKGADKTV--KGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHhCC
Confidence 577776 89999999999988766 78899999999865
No 49
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.64 E-value=5e-16 Score=143.62 Aligned_cols=118 Identities=22% Similarity=0.234 Sum_probs=109.5
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (608)
+++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|
T Consensus 28 ~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 99 (172)
T 3v30_A 28 LVNKPDERGFTPL--------IWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYD 99 (172)
T ss_dssp GGGCCCTTSCCHH--------HHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred cccCCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC
Confidence 3888999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 97 FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 97 ~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~~ 148 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGADLTT--EADSGYTPMDLAVALGYR 148 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHhCcH
Confidence 99998 577776 89999999999988776 778899999999986654
No 50
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.64 E-value=3.9e-16 Score=134.59 Aligned_cols=86 Identities=21% Similarity=0.357 Sum_probs=78.0
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCcc-ccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRL-EIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~-~i~~~~~~~ll~ 246 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||++ .++.+++.+++.
T Consensus 29 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~ 103 (116)
T 3fkc_A 29 GLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIK 103 (116)
T ss_dssp TTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHH
T ss_pred CCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHH
Confidence 446799999999999999999999999999999864 45788899999999999999999999 799999999999
Q ss_pred HHhHhcHHHHHH
Q 007317 247 ICKVCKCESLQR 258 (608)
Q Consensus 247 ~A~~c~~~~L~~ 258 (608)
+|+.++++.|.+
T Consensus 104 ~A~~l~i~~L~~ 115 (116)
T 3fkc_A 104 SGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHTCHHHHT
T ss_pred HHHHhCccccCc
Confidence 999887777653
No 51
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.64 E-value=8.3e-17 Score=141.01 Aligned_cols=88 Identities=18% Similarity=0.378 Sum_probs=79.0
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCC-CCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREK-LSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~-v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+|||++.++.+++.+++.
T Consensus 30 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~~~v~~ll~ 107 (125)
T 3ohu_A 30 DILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLSRENIREVIR 107 (125)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEECTTTHHHHHH
T ss_pred CCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEECHHHHHHHHH
Confidence 446799999999999999999999999999999988766 56788888 999999999999999999999999999999
Q ss_pred HHhHhcHHHHH
Q 007317 247 ICKVCKCESLQ 257 (608)
Q Consensus 247 ~A~~c~~~~L~ 257 (608)
+|+.++++.|.
T Consensus 108 ~A~~l~i~~L~ 118 (125)
T 3ohu_A 108 CAEFLRMHNLE 118 (125)
T ss_dssp HHHHHTBSSCT
T ss_pred HHHHhCCHHHH
Confidence 99877655443
No 52
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.63 E-value=4.1e-16 Score=155.67 Aligned_cols=107 Identities=22% Similarity=0.280 Sum_probs=58.2
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKV 111 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~ 111 (608)
+.||+|+..|+.+++++|++.|++++.++..|.||+|+|+..++.+++++|+++|++++..|..|.| +|+|+. +.++
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~ 167 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHEL 167 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGG
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Confidence 3455555555555555555555555555555555555555555555555555555555555555554 344444 4555
Q ss_pred HHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 112 RKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 112 ~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+++|+.+|++++. .+..|.||||+||..++
T Consensus 168 v~~Ll~~gadvn~--~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 168 VALLLQHGASINA--SNNKGNTALHEAVIEKH 197 (269)
T ss_dssp HHHHHHTTCCTTC--BCTTSCBHHHHHHHTTC
T ss_pred HHHHHHCCCCCCc--cccCCCcHHHHHHHcCC
Confidence 5555555555443 44555555555555443
No 53
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.63 E-value=2.9e-16 Score=136.17 Aligned_cols=90 Identities=18% Similarity=0.361 Sum_probs=77.5
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||++||+||++||.++ ...|.++++++++|+.+|+|+|||++.++.+++.+++.+
T Consensus 25 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~~~~~~~ll~~ 99 (119)
T 2q81_A 25 GLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAV 99 (119)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHHHHSCCCCCTTTHHHHHHH
T ss_pred CCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHHcCCCCccCHHHHHHHHHH
Confidence 446799999999999999999999999999999863 335667889999999999999999999999999998888
Q ss_pred HhHhcHHHHHHHHHH
Q 007317 248 CKVCKCESLQRIIEK 262 (608)
Q Consensus 248 A~~c~~~~L~~~l~~ 262 (608)
|..++++.|.+.+..
T Consensus 100 A~~l~i~~L~~~C~~ 114 (119)
T 2q81_A 100 ATFLQMQDIITACHA 114 (119)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHH
Confidence 887766666655543
No 54
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.63 E-value=6.1e-16 Score=133.80 Aligned_cols=86 Identities=19% Similarity=0.255 Sum_probs=77.4
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVKI 247 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~~ 247 (608)
+.+|||++.++|+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||++.++.+++.+++.+
T Consensus 28 ~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~~~v~~ll~a 98 (119)
T 3m5b_A 28 PALCDTLITVGSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEA 98 (119)
T ss_dssp TTTCCEEEEETTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEECGGGHHHHHHH
T ss_pred CCCcceEEEECCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCHHHHHHHHHH
Confidence 5578999999999999999999999999974 3457889999999999999999999999999999999999
Q ss_pred HhHhcHHHHHHHHHH
Q 007317 248 CKVCKCESLQRIIEK 262 (608)
Q Consensus 248 A~~c~~~~L~~~l~~ 262 (608)
|+.++++.|.+.+.+
T Consensus 99 A~~l~i~~l~~~C~~ 113 (119)
T 3m5b_A 99 ARALGVQSLEEACWR 113 (119)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHH
Confidence 998888877777654
No 55
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.62 E-value=1.2e-16 Score=139.80 Aligned_cols=90 Identities=20% Similarity=0.403 Sum_probs=76.4
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEc-CCCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSR-EKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l-~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.+++.++ ..|.+ .++++++|..+|+|+|||++.++.+++.+++.
T Consensus 27 ~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~~~v~~ll~ 104 (124)
T 2ihc_A 27 DVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTAKLILSKENVDEVCK 104 (124)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHSEEEEETTTHHHHHH
T ss_pred CCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCCCcccCHHHHHHHHH
Confidence 4467999999999999999999999999999999888664 46777 48999999999999999999999999999999
Q ss_pred HHhHhcHHHHHHH
Q 007317 247 ICKVCKCESLQRI 259 (608)
Q Consensus 247 ~A~~c~~~~L~~~ 259 (608)
+|..++++.|.+.
T Consensus 105 ~A~~~~~~~L~~~ 117 (124)
T 2ihc_A 105 CVEFLSVHNIEES 117 (124)
T ss_dssp HHHHHTBSSCCGG
T ss_pred HHHHHCCHHHHHH
Confidence 9977755554433
No 56
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.62 E-value=6.2e-16 Score=137.35 Aligned_cols=113 Identities=27% Similarity=0.375 Sum_probs=102.0
Q ss_pred CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc
Q 007317 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR 101 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~ 101 (608)
...|.||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.|
T Consensus 11 ~~~~~t~l--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 82 (136)
T 2jab_A 11 GSDLGKKL--------LEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFT 82 (136)
T ss_dssp -CHHHHHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred cccccHHH--------HHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 34567777 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 102 -~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+|+++. +.+++++|+.+|++... .+..|.||+|+|+..++.
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADVNA--QDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcC--cCCCCCCHHHHHHHCCCH
Confidence 577777 89999999999988766 778899999999986653
No 57
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.61 E-value=2.3e-15 Score=124.21 Aligned_cols=90 Identities=36% Similarity=0.515 Sum_probs=82.7
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC- 102 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~- 102 (608)
+|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..|..|.||
T Consensus 1 ~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l 72 (93)
T 1n0q_A 1 NGRTPL--------HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (93)
T ss_dssp --CCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcHH--------HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 488999 99999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHh--hHHHHHHHHhhcCC
Q 007317 103 HYAAL--NLKVRKLLKAYEAR 121 (608)
Q Consensus 103 ~~aa~--~~~~~~~L~~~~~~ 121 (608)
|+++. +.+++++|+.+|++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 73 HLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 66666 89999999998753
No 58
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.61 E-value=3.9e-16 Score=146.78 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=103.2
Q ss_pred CCCCCC-CCCCCCCCCCCchhhhHhhhcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC------HHHHHHH
Q 007317 17 DLDASD-FSSSVPLKKVPNGDVFEASRAGDV----DRLRYILESGVNVNARDQWDSVALYYACLAGH------LDAARML 85 (608)
Q Consensus 17 ~l~~~d-~~g~tpL~~~~~~~l~~A~~~g~~----~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~------~~~v~~L 85 (608)
+++.++ ..|+||| |+|+..|+. +++++|+++|+++|.+|..|+||||+|+..|+ .+++++|
T Consensus 29 ~~~~~~~~~g~T~L--------h~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~L 100 (186)
T 3t8k_A 29 GYEDKESVLKSNIL--------YDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIF 100 (186)
T ss_dssp SSSCHHHHHTTTHH--------HHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CcccccccCCCCHH--------HHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHH
Confidence 345555 7799999 999999985 58999999999999999999999999999987 6789999
Q ss_pred HhcCCCcCcccCCCC-cH-HHHHh-------hHHHHHHHHh-hcCCCCCCCCcccccccccccccccch
Q 007317 86 LESGAICSEHTFDGD-RC-HYAAL-------NLKVRKLLKA-YEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 86 l~~ga~~~~~d~~g~-~~-~~aa~-------~~~~~~~L~~-~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+++|++++.+|..|. || |+++. +.+++++|+. +|++++. .+..|.||||+|+..++.
T Consensus 101 l~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~--~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 101 LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI--KDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp HHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC--CCTTSCCHHHHHHTTTCH
T ss_pred HHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc--cCCCCCCHHHHHHHcCCH
Confidence 999999999999999 75 66554 3468899999 9998877 889999999999987764
No 59
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.60 E-value=2.5e-15 Score=145.98 Aligned_cols=121 Identities=15% Similarity=0.115 Sum_probs=109.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCC-----CCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNV-----NARDQWDSVALYYACLAGHLDAARMLLES 88 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~i-----n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 88 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++
T Consensus 26 ~g~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 97 (232)
T 2rfa_A 26 EGCEVHQRGAMGETAL--------HIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR 97 (232)
T ss_dssp TCSCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCcccCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC
Confidence 3899999999999999 9999999999999999999887 77788999999999999999999999999
Q ss_pred CCCcCcccC-------------CCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 89 GAICSEHTF-------------DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 89 ga~~~~~d~-------------~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|++++..+. .|.| +|+++. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 98 g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 98 GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA--QDSLGNTVLHILILQPNK 167 (232)
T ss_dssp TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHTCSCH
T ss_pred CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCh
Confidence 999998765 6887 577777 89999999999988776 788999999999987664
No 60
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.60 E-value=3.5e-16 Score=137.75 Aligned_cols=87 Identities=23% Similarity=0.393 Sum_probs=76.5
Q ss_pred CCCCCeeEEecCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcC-CCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 168 SFPPDVVFYVQGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSRE-KLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 168 ~~~~Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~-~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
+.+|||++.++|+.|+|||.||+++|+||++||.++ ....|.++ ++++++|+.+|+|+|||++.++.+++.+++.
T Consensus 31 ~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~~~~~~ll~ 106 (129)
T 3ga1_A 31 GLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMY 106 (129)
T ss_dssp TCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSEEECCTTTHHHHHH
T ss_pred CCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCccccCHHHHHHHHH
Confidence 446799999999999999999999999999999876 55678896 9999999999999999999999999999988
Q ss_pred HHhHhcHHHHHH
Q 007317 247 ICKVCKCESLQR 258 (608)
Q Consensus 247 ~A~~c~~~~L~~ 258 (608)
+|..++++.|.+
T Consensus 107 ~A~~~~i~~l~~ 118 (129)
T 3ga1_A 107 TAGFLQIQEIME 118 (129)
T ss_dssp HHHHTTBTTSSC
T ss_pred HHHHhCCHHHHH
Confidence 887765544433
No 61
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.60 E-value=2.8e-15 Score=149.75 Aligned_cols=120 Identities=22% Similarity=0.276 Sum_probs=97.1
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ-WDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
+++++.++..|+||| |+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++
T Consensus 148 ~~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 148 RLQLEAENYDGHTPL--------HVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGGTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhcCCCcCCCCcCHH--------HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 567899999999999 999999999999999999999999985 49999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.+|..|.|| |+|+. +.+++++|+.+|++++. .+..|.||++.|......
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPE--DGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCC--CC----------------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCc--CCCcccccccccCCcccc
Confidence 999999985 66666 89999999999999877 788999999998875443
No 62
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.60 E-value=1.1e-15 Score=144.21 Aligned_cols=118 Identities=18% Similarity=0.166 Sum_probs=108.4
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT 96 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d 96 (608)
.+|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|
T Consensus 27 ~~n~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 98 (192)
T 2rfm_A 27 LRNYRDSYNRTPL--------MVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD 98 (192)
T ss_dssp HHTCCCTTCCCHH--------HHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred HHhCcCCCCCCHH--------HHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 3678899999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 97 FDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 97 ~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|.| +|+++. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 147 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHGANVND--RNLEGETPLIVASKYGRS 147 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC--CCTTCCCHHHHHHHHTCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCCHHHHHHHcCCH
Confidence 99998 577766 88999999999988766 788899999999986553
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.59 E-value=2.5e-15 Score=136.73 Aligned_cols=111 Identities=18% Similarity=0.122 Sum_probs=62.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSV-ALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|+++|.+|..|+||| |+|+ .|+.+++++|+++|++++.+|..|+| |||+|+..|+.+++++|+++|++++
T Consensus 35 g~~~~~~~~~g~t~L--------~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~ 105 (156)
T 1bi7_B 35 GANPNAPNSYGRRPI--------QVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD 105 (156)
T ss_dssp TCCTTCCCSSSCCTT--------TSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS
T ss_pred CCCCCCCCCCCCCHH--------HHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc
Confidence 666666666666666 6654 66666666666666666666666666 6666666666666666666666666
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCccccccccc
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTF 136 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~ 136 (608)
..|..|.|| |+++. +.+++++|+.+|+++.. .+..|.||.+
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~~~ 149 (156)
T 1bi7_B 106 VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG--SNHARIDAAE 149 (156)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc--cCcCcCcccc
Confidence 666666653 44444 56666666666665544 4455555544
No 64
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.59 E-value=8e-15 Score=138.89 Aligned_cols=119 Identities=17% Similarity=0.189 Sum_probs=108.5
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLL-ESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~~~ 93 (608)
+.++|.+|..|+||| |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+ ..+++++
T Consensus 29 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~ 100 (201)
T 3hra_A 29 TYQVDEVDTEGNTPL--------NIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLN 100 (201)
T ss_dssp TCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred CCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccc
Confidence 559999999999999 9999999999999999999999999999999999999999999999999 5678999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhc-CCCCCCCCcccccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYE-ARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~-~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
..+..|.| +|+++. +.+++++|+.++ .+.+. .+..|.||||.|+..+.
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 101 KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF--QNDFGYTALIEAVGLRE 152 (201)
T ss_dssp CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC--CCTTSCCHHHHHHHSSC
T ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC--CCCCCCCHHHHHHHhcc
Confidence 99999997 577777 899999999998 66655 77889999999997655
No 65
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.59 E-value=4e-15 Score=129.37 Aligned_cols=111 Identities=30% Similarity=0.407 Sum_probs=101.7
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-H
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-C 102 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~ 102 (608)
+|+||| |+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|.| +
T Consensus 1 ~g~t~L--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l 72 (126)
T 1n0r_A 1 NGRTPL--------HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPL 72 (126)
T ss_dssp CCCCHH--------HHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccHH--------HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHH
Confidence 488999 9999999999999999999999999999999999999999999999999999999999999998 5
Q ss_pred HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 103 HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 103 ~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|+++. +.+++++|+.+|.++.. .+..|.||+++|+..+..
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAGADVNA--KDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcChHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHcCcH
Confidence 66666 89999999999988766 678899999999976553
No 66
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.59 E-value=8.8e-15 Score=141.47 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=70.2
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CCcCc
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AICSE 94 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~~~ 94 (608)
++++.++..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++.
T Consensus 98 ~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 169 (228)
T 2dzn_A 98 PDLNKITNQGVTCL--------HLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW 169 (228)
T ss_dssp CCTTCCCTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC
T ss_pred cccccCCcCCCCHH--------HHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC
Confidence 55566666666666 6666666666666666666666666666666666666666666666666666 66666
Q ss_pred ccCCCCcH-HHHHh--hHHHHHHHH-hhcCCCCCCCCccccccccccccc
Q 007317 95 HTFDGDRC-HYAAL--NLKVRKLLK-AYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 95 ~d~~g~~~-~~aa~--~~~~~~~L~-~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
.|..|.|| |+++. +.+++++|+ .+|+++.. .+..|.||+++|+.
T Consensus 170 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~--~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 170 QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL--VDNKGAKAEDVALN 217 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC--BCTTSCBGGGGCSS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCc--cCCCCCcHHHHHHH
Confidence 66666653 44444 556666666 55655544 45566666666554
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.59 E-value=5.8e-15 Score=131.00 Aligned_cols=99 Identities=19% Similarity=0.122 Sum_probs=92.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQW-DSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|++++.+|..|+||| |+|+. |+.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|+++
T Consensus 34 ~g~~~~~~~~~g~t~L--------~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 34 AGADPNALNRFGRRPI--------QVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp TTCCTTCCCTTCCTTT--------TTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred cCCCcCCcCCCCCCHH--------HHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3899999999999999 99999 9999999999999999999999 999999999999999999999999999
Q ss_pred CcccCCCCcH-HHHHh--hHHHHHHHHhhcCC
Q 007317 93 SEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (608)
Q Consensus 93 ~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~ 121 (608)
+..|..|.|| ++++. +.+++++|+.+|++
T Consensus 105 ~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 105 DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999985 66666 89999999998864
No 68
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.58 E-value=1e-15 Score=139.31 Aligned_cols=116 Identities=23% Similarity=0.106 Sum_probs=101.7
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
.+..++.|.||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+ .|+.+++++|+++|++++..|.
T Consensus 5 ~~~~~~~~~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~ 75 (156)
T 1bi7_B 5 AGSSMEPSADWL--------ATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP 75 (156)
T ss_dssp -----CCSTTHH--------HHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT
T ss_pred ccCCCccchHHH--------HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC
Confidence 355678899999 9999999999999999999999999999999999985 9999999999999999999999
Q ss_pred CCCc-H-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 98 DGDR-C-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 98 ~g~~-~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.|.| | |+++. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 76 ~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~~ 124 (156)
T 1bi7_B 76 ATLTRPVHDAAREGFLDTLVVLHRAGARLDV--RDAWGRLPVDLAEELGHR 124 (156)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSC--CCTTCCCHHHHHHHHTCH
T ss_pred CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcc--cCCCCCCHHHHHHHhCHH
Confidence 9987 5 66666 89999999999988776 778899999999975543
No 69
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.58 E-value=6.4e-15 Score=142.86 Aligned_cols=120 Identities=28% Similarity=0.319 Sum_probs=95.6
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 63 g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 134 (231)
T 3aji_A 63 GVPVNDKDDAGWSPL--------HIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA 134 (231)
T ss_dssp TCCSCCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCcCCCCCCHH--------HHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 778888888888888 888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.+..|.| +|+++. +.+++++|+.+|.+++. .+..|.||||.|+..++.
T Consensus 135 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 135 KDHYDATAMHRAAAKGNLKMVHILLFYKASTNI--QDTEGNTPLHLACDEERV 185 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC--CCTTSCCHHHHHHHTTCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc--cCCCCCCHHHHHHHCCCH
Confidence 8888877 466655 77788888887777655 567788888888876653
No 70
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.58 E-value=3.8e-15 Score=146.99 Aligned_cols=117 Identities=19% Similarity=0.147 Sum_probs=57.3
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|++++.+|..|+||| |+|+..|+.+++++|+++|+ +++.++..|+||||+|+..|+.+++++|+++|++++
T Consensus 80 g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (253)
T 1yyh_A 80 SADANIQDNMGRTPL--------HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 151 (253)
T ss_dssp TCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT
T ss_pred CCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 555666666666665 55555555555555554443 444444444555555554444445555544444444
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
..|..|.| +|+++. +.+++++|+.+|++++. .+..|.||||+|+..
T Consensus 152 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM--QNNREETPLFLAARE 200 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHC
Confidence 44444444 233333 44444444444444333 344444454444443
No 71
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.58 E-value=6.6e-15 Score=142.74 Aligned_cols=120 Identities=23% Similarity=0.230 Sum_probs=109.1
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
+..++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 30 ~~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 101 (231)
T 3aji_A 30 KSLATRTDQDSRTAL--------HWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA 101 (231)
T ss_dssp GGGGGCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred hhhhhcCCCCCCCHH--------HHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCC
Confidence 344778899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.+..|.| +|+++. +.+++++|+..|.++.. .+..|.||||.|+..++.
T Consensus 102 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 152 (231)
T 3aji_A 102 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA--KDHYDATAMHRAAAKGNL 152 (231)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCCcHHHHHHHcCCH
Confidence 9999998 566666 88999999999988766 678899999999986654
No 72
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.58 E-value=1e-14 Score=142.21 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=65.7
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI---- 91 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~---- 91 (608)
+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 36 ~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~ 107 (236)
T 1ikn_D 36 AFLNFQNNLQQTPL--------HLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH 107 (236)
T ss_dssp CCCCCCCTTCCCHH--------HHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS
T ss_pred HHhhccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHH
Confidence 45666666666666 666666666666666666666666665666666666666666666666555544
Q ss_pred --cCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcc-cccccccccccccc
Q 007317 92 --CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCGANR 143 (608)
Q Consensus 92 --~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~-~g~t~l~lac~~~~ 143 (608)
++..+..|.| +|+++. +.+++++|+.+|+++.. .+. .|.||||+|+..++
T Consensus 108 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~~g~tpL~~A~~~~~ 163 (236)
T 1ikn_D 108 SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA--QEPCNGRTALHLAVDLQN 163 (236)
T ss_dssp CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTTCCCHHHHHHHTTC
T ss_pred HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCCHHHHHHHcCC
Confidence 2344445554 344444 55555555555555443 333 55556665555443
No 73
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.57 E-value=7.8e-15 Score=145.52 Aligned_cols=120 Identities=23% Similarity=0.335 Sum_probs=108.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 25 ~g~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 96 (261)
T 2xai_A 25 QGWAVNIITADHVSPL--------HEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 96 (261)
T ss_dssp TTCCSSCCCTTCCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred CCCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..+ .|.| +|+++. +.+++++|+.+|.+++. .+..|.||||.|+..++.
T Consensus 97 ~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 97 PES-DLASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQR 147 (261)
T ss_dssp CSC-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTCH
T ss_pred CCC-CCCCHHHHHHHcCcHHHHHHHHHcCCCCCc--CCCCCCCHHHHHHHhCCH
Confidence 644 4666 577777 89999999999988766 788899999999986654
No 74
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.57 E-value=1.1e-14 Score=129.22 Aligned_cols=98 Identities=27% Similarity=0.390 Sum_probs=91.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 36 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 107 (136)
T 2jab_A 36 NGADVNAKDEYGLTPL--------YLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN 107 (136)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhc
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYE 119 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~ 119 (608)
..|..|.|| ++++. +.+++++|+++|
T Consensus 108 ~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 108 AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999985 66666 889999998865
No 75
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.57 E-value=1.2e-14 Score=141.54 Aligned_cols=118 Identities=20% Similarity=0.275 Sum_probs=63.7
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
.+++.++..|+||| |+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..
T Consensus 102 ~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 173 (237)
T 3b7b_A 102 MDVNCQDDGGWTPM--------IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173 (237)
T ss_dssp CCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCC
T ss_pred CCcccCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc
Confidence 44444455555555 5555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 96 TFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 96 d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
|..|.|| |+++. +.+++++|+.+|+++.. .+..|.||+++|+..++
T Consensus 174 ~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~--~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 174 NIHGDSPLHIAARENRYDCVVLFLSRDSDVTL--KNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--CCTTSCCHHHHSCTTCH
T ss_pred CCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCc--cCCCCCCHHHHHHHHHH
Confidence 5555543 33333 45555555555555444 44555555555555443
No 76
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.57 E-value=1.8e-14 Score=145.51 Aligned_cols=125 Identities=19% Similarity=0.225 Sum_probs=110.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC-----------------------------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ----------------------------- 64 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~----------------------------- 64 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.++.
T Consensus 95 ~ga~~~~~~~~g~tpL--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~ 166 (299)
T 1s70_B 95 NGANINQPDNEGWIPL--------HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDI 166 (299)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCH
T ss_pred CCCCCCCCCCCCCcHH--------HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCc
Confidence 4888999999999999 999999999999999999999887653
Q ss_pred -------------------------------CCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCcH-HHHHh--hHH
Q 007317 65 -------------------------------WDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRC-HYAAL--NLK 110 (608)
Q Consensus 65 -------------------------------~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~~-~~aa~--~~~ 110 (608)
.|.||||+|+..|+.+++++|+++|++++..|..|.|| |+|+. +.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~ 246 (299)
T 1s70_B 167 EAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHH
Confidence 46788999999999999999999999999999999984 77776 899
Q ss_pred HHHHHHhhcCCCCCCCCcccccccccccccccchhhHH
Q 007317 111 VRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQFLEE 148 (608)
Q Consensus 111 ~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~~l~~ 148 (608)
++++|+.+|++++. .+..|.||+++|+.....++..
T Consensus 247 ~v~~Ll~~gad~~~--~d~~g~t~l~~A~~~~~~~l~~ 282 (299)
T 1s70_B 247 ACRILVENLCDMEA--VNKVGQTAFDVADEDILGYLEE 282 (299)
T ss_dssp HHHHHHHTTCCTTC--CCTTSCCTTTSCCSGGGHHHHH
T ss_pred HHHHHHHcCCCCCC--cCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999998876 7889999999999866665543
No 77
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.56 E-value=1.4e-14 Score=141.18 Aligned_cols=114 Identities=20% Similarity=0.241 Sum_probs=67.0
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
+++.+|..|+||| |+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..
T Consensus 108 ~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 179 (241)
T 1k1a_A 108 DLEARNYDGLTAL--------HVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQ 179 (241)
T ss_dssp CTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCB
T ss_pred cccccCcCCCcHH--------HHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 4455555555555 66666666666666666666666655 55666666666666666666666666666666
Q ss_pred cCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 96 d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
|..|.| +|+++. +.+++++|+.+|++++. .+..|.||+++|+.
T Consensus 180 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 180 MYSGSSALHSASGRGLLPLVRTLVRSGADSSL--KNCHNDTPLMVARS 225 (241)
T ss_dssp CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCTTTTCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC--cCCCCCCHHHHHHh
Confidence 666655 344444 55566666666655544 45556666666554
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.56 E-value=3.4e-15 Score=147.74 Aligned_cols=121 Identities=16% Similarity=0.137 Sum_probs=106.9
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHHcCCHHH
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD--------------QWDSVALYYACLAGHLDA 81 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d--------------~~g~tpLh~A~~~g~~~~ 81 (608)
.+++..|..|+||| |+|+..|+.+++++|+++|++++.++ ..|+||||+|+..|+.++
T Consensus 84 ~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 155 (260)
T 3jxi_A 84 SPFRDVYYRGQTAL--------HIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI 155 (260)
T ss_dssp CCBCCSSEESBCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred ccccccccCCCCHH--------HHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHH
Confidence 45566677999999 99999999999999999999999998 689999999999999999
Q ss_pred HHHHHh---cCCCcCcccCCCCc-HHHHHh--h---------HHHHHHHHhhcCCCCC-----CCCcccccccccccccc
Q 007317 82 ARMLLE---SGAICSEHTFDGDR-CHYAAL--N---------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGA 141 (608)
Q Consensus 82 v~~Ll~---~ga~~~~~d~~g~~-~~~aa~--~---------~~~~~~L~~~~~~~~~-----~~~~~~g~t~l~lac~~ 141 (608)
+++|++ +|++++..|..|.| +|+++. + .+++++|+.+|+++.. +..+..|.||||+|+..
T Consensus 156 v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 999999 99999999999998 577774 2 5899999999987743 33678899999999987
Q ss_pred cch
Q 007317 142 NRQ 144 (608)
Q Consensus 142 ~~~ 144 (608)
++.
T Consensus 236 g~~ 238 (260)
T 3jxi_A 236 GKI 238 (260)
T ss_dssp TCH
T ss_pred CCH
Confidence 764
No 79
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.56 E-value=1.1e-14 Score=133.70 Aligned_cols=111 Identities=15% Similarity=0.110 Sum_probs=102.2
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-H
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-C 102 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~ 102 (608)
.|.||| |.|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.| +
T Consensus 2 ~~~t~L--------~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSV--------HQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCH--------HHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCcchH--------HHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 578999 9999999999999999999999999999999999999999999999999999999999999998 5
Q ss_pred HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 103 HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 103 ~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|.++. +.+++++|+.+|++++. .+..|.||||.|+..++.
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 115 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVDVNE--YDWNGGTPLLYAVHGNHV 115 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCc--CCCCCCCHHHHHHHcCCH
Confidence 77766 89999999999988776 788899999999986654
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.56 E-value=1.8e-14 Score=140.14 Aligned_cols=119 Identities=13% Similarity=0.036 Sum_probs=102.1
Q ss_pred CCCCCCCCC---CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 15 EIDLDASDF---SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 15 ~~~l~~~d~---~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
|++.+..+. +|.||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 8 ~~~~~~~~~~~~~~~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 8 AGSPRKARRARLNPLVLL--------LDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp --CCCCCCCTTSCHHHHH--------HHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCccccccccchhHHH--------HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 555555444 455556 999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCc-cccccccccc--ccccc
Q 007317 92 CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL-QAALRDTFLG--CGANR 143 (608)
Q Consensus 92 ~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~-~~g~t~l~la--c~~~~ 143 (608)
++..|..|.| +|+++. +.+++++|+.+|+++.. .. ..|.||||+| +..+.
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~--~~~~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA--TTLSDGATAFEKCDPYREGY 135 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC--CCSSTTCCTGGGCCTTSTTH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc--ccCCCCCCHHHHHHHHhcCh
Confidence 9999999998 577777 89999999999988766 44 5899999999 65554
No 81
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.56 E-value=1.2e-14 Score=137.72 Aligned_cols=121 Identities=21% Similarity=0.200 Sum_probs=110.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC-CC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYIL-ESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG-AI 91 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll-~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~ 91 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+ ..+++++.++..|.||||+|+..|+.+++++|+++| ++
T Consensus 61 ~g~~~~~~~~~g~t~l--------~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 132 (201)
T 3hra_A 61 RGADINLQNSISDSPY--------LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED 132 (201)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC
T ss_pred cCCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3899999999999999 9999999999999999 577899999999999999999999999999999998 99
Q ss_pred cCcccCCCCc-HHHHHh--h-----HHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 CSEHTFDGDR-CHYAAL--N-----LKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 ~~~~d~~g~~-~~~aa~--~-----~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++..|..|.| +|+++. + .+++++|+.+|++++. .+..|.||+|+|+..++.
T Consensus 133 ~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 133 IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSI--KDNSGRTAMDYANQKGYT 191 (201)
T ss_dssp TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHTCH
T ss_pred cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCc--cCCCCCCHHHHHHHcCCH
Confidence 9999999998 567765 3 7899999999988876 788899999999976553
No 82
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.56 E-value=1.1e-14 Score=147.08 Aligned_cols=121 Identities=23% Similarity=0.263 Sum_probs=102.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 62 ~g~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 133 (299)
T 1s70_B 62 RGADINYANVDGLTAL--------HQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG 133 (299)
T ss_dssp HCCCTTCBCTTCCBHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCCCcccCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCc-------------------------------------------------------------HHHHHh--hHH
Q 007317 94 EHTFDGDR-------------------------------------------------------------CHYAAL--NLK 110 (608)
Q Consensus 94 ~~d~~g~~-------------------------------------------------------------~~~aa~--~~~ 110 (608)
..+..|.| +|+++. +.+
T Consensus 134 ~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 213 (299)
T 1s70_B 134 AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE 213 (299)
T ss_dssp CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH
Confidence 87765544 344444 567
Q ss_pred HHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 111 VRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 111 ~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 214 ~v~~Ll~~g~d~~~--~d~~g~tpL~~A~~~~~~ 245 (299)
T 1s70_B 214 VLKLLIQARYDVNI--KDYDGWTPLHAAAHWGKE 245 (299)
T ss_dssp HHHHHHTTTCCTTC--CCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHHcCCCCCC--cCCCCCcHHHHHHhcCCH
Confidence 77788877776655 667788888888775553
No 83
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.56 E-value=5.3e-15 Score=142.85 Aligned_cols=113 Identities=31% Similarity=0.333 Sum_probs=103.1
Q ss_pred CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcCcccCCC
Q 007317 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES-GAICSEHTFDG 99 (608)
Q Consensus 21 ~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g 99 (608)
.+..|.||| |+|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+++ |++++..|..|
T Consensus 69 ~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g 140 (222)
T 3ehr_A 69 QAESIDNPL--------HEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLG 140 (222)
T ss_dssp HEEEESCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTS
T ss_pred ccccccccc--------ccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCC
Confidence 345678888 999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred Cc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 100 ~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.| +|+|+. +.+++++|+.+|++++. .+..|.||+++|+..+.
T Consensus 141 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 141 DTALHAAAWKGYADIVQLLLAKGARTDL--RNIEKKLAFDMATNAAC 185 (222)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSCC--CCTTSCCHHHHCCSHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcc--ccCCCCCHHHHhcchhH
Confidence 98 577776 89999999999998876 78899999999997443
No 84
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.55 E-value=1.8e-14 Score=138.76 Aligned_cols=119 Identities=18% Similarity=0.145 Sum_probs=78.0
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|++++.+|..|+||| |+|+..|+.+++++|+++|+ +++.++..|+||||+|+..|+.+++++|+++|++++
T Consensus 48 g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 119 (223)
T 2f8y_A 48 SADANIQDNMGRTPL--------HAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 119 (223)
T ss_dssp TCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc
Confidence 677777777777777 66666666666666666655 566666666666666666666666666666666666
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
..|..|.| +|+++. +.+++++|+.+|++++. .+..|.||+|+|+..++
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 120 AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM--QNNREETPLFLAAREGS 170 (223)
T ss_dssp CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHHHTC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--cCCCCcCHHHHHHHcCC
Confidence 66666665 344444 56666666666665544 45566666666665444
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.55 E-value=6.3e-15 Score=143.38 Aligned_cols=116 Identities=16% Similarity=0.098 Sum_probs=105.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 44 g~~~~~~d~~g~tpL--------h~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 115 (229)
T 2vge_A 44 MNDPSQPNEEGITAL--------HNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA 115 (229)
T ss_dssp SSCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC
T ss_pred CCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 889999999999999 999999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCcH-HHH--Hh--hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 95 HT-FDGDRC-HYA--AL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 95 ~d-~~g~~~-~~a--a~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
.+ ..|.|| +++ +. +.+++++|+..|++++. .+..|.|+++.++.
T Consensus 116 ~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~--~~~~~~~~l~~~~~ 165 (229)
T 2vge_A 116 TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL--MNSGAVYALWDYSA 165 (229)
T ss_dssp CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT--SGGGEEEESSCBCC
T ss_pred ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc--ccCCchHHHHHHhh
Confidence 86 589885 555 44 89999999999988776 67788899986554
No 86
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.55 E-value=9.2e-15 Score=144.26 Aligned_cols=120 Identities=18% Similarity=0.120 Sum_probs=104.4
Q ss_pred CCCCCC-CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-Cc
Q 007317 15 EIDLDA-SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA-IC 92 (608)
Q Consensus 15 ~~~l~~-~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~ 92 (608)
|++++. .|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+ ++
T Consensus 46 g~~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 117 (253)
T 1yyh_A 46 GASLHNQTDRTGETAL--------HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 117 (253)
T ss_dssp ------CCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT
T ss_pred cCCcccccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 778755 589999999 99999999999999999999999999999999999999999999999999986 89
Q ss_pred CcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+..+..|.| +|+++. +.+++++|+.+|.+++. .+..|.||||.||..++.
T Consensus 118 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~~ 170 (253)
T 1yyh_A 118 DARMHDGTTPLILAARLAVEGMLEDLINSHADVNA--VDDLGKSALHWAAAVNNV 170 (253)
T ss_dssp TCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC--BCTTSCBHHHHHHHHTCH
T ss_pred cccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCH
Confidence 999999998 577766 78899999999988766 778899999999986664
No 87
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.55 E-value=8e-15 Score=142.88 Aligned_cols=119 Identities=21% Similarity=0.211 Sum_probs=103.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN------VNARDQWDSVALYYACLAGHLDAARMLLESG 89 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~------in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 89 (608)
++++.+|..|+||| |+|+..|+.+++++|+++|++ ++..+..|+||||+|+..|+.+++++|+++|
T Consensus 69 ~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 140 (236)
T 1ikn_D 69 CDPELRDFRGNTPL--------HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG 140 (236)
T ss_dssp CCSCCCCTTCCCHH--------HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 57888899999999 999999999999999998875 5677888999999999999999999999999
Q ss_pred CCcCcccC-CCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 90 AICSEHTF-DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 90 a~~~~~d~-~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++++..+. .|.| +|+++. +.+++++|+.+|+++.. .+..|.||+++|+..++.
T Consensus 141 ~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~g~tpl~~A~~~~~~ 197 (236)
T 1ikn_D 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR--VTYQGYSPYQLTWGRPST 197 (236)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC--CCTTCCCGGGGCTTSSCH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc--ccCCCCCHHHHHHccCch
Confidence 99998887 8887 466666 88999999999888776 678899999999986664
No 88
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.54 E-value=1.4e-14 Score=144.74 Aligned_cols=121 Identities=16% Similarity=0.084 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCC-----------------------------------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN----------------------------------- 58 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~----------------------------------- 58 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++
T Consensus 67 ~ga~~~~~~~~g~tpL--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (282)
T 1oy3_D 67 AGAGVLVAERGGHTAL--------HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138 (282)
T ss_dssp TTCCSSCCCTTSCCHH--------HHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------
T ss_pred cCCCCCCCCCCCCCHH--------HHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccch
Confidence 4899999999999999 999999999999999987755
Q ss_pred ------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCC-CCc-HHHHHh--hHHHHHHHHhhcCCC
Q 007317 59 ------------VNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFD-GDR-CHYAAL--NLKVRKLLKAYEARP 122 (608)
Q Consensus 59 ------------in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~-g~~-~~~aa~--~~~~~~~L~~~~~~~ 122 (608)
++.++..|+||||+|+..|+.+++++|+++|++++..+.. |.| +|+|+. +.+++++|+.+|+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~ 218 (282)
T 1oy3_D 139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218 (282)
T ss_dssp -----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred hhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7788899999999999999999999999999999998864 887 577777 899999999999988
Q ss_pred CCCCCcccccccccccccccch
Q 007317 123 PPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 123 ~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+. ++..|.||||+|+..++.
T Consensus 219 ~~--~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 219 TA--RMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp TC--CCTTSCCHHHHHHTSSCH
T ss_pred cc--cccCCCCHHHHHHHcCCc
Confidence 77 788999999999987664
No 89
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.54 E-value=9.1e-15 Score=144.37 Aligned_cols=116 Identities=18% Similarity=0.153 Sum_probs=103.0
Q ss_pred CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCC-------------CCcHHHHHHHcCCHHHHHHHHh
Q 007317 21 SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQW-------------DSVALYYACLAGHLDAARMLLE 87 (608)
Q Consensus 21 ~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~-------------g~tpLh~A~~~g~~~~v~~Ll~ 87 (608)
+|..|+||| |+|+..|+.+++++|+++|++++.++.. |+||||+|+..|+.+++++|++
T Consensus 86 ~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 157 (256)
T 2etb_A 86 EFYQGHSAL--------HIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE 157 (256)
T ss_dssp TTTTTCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred ccccCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 457899999 9999999999999999999999999986 9999999999999999999999
Q ss_pred ---cCCCcCcccCCCCc-HHHHHh----hHH-------HHHHHHhhcCCCCC-----CCCcccccccccccccccch
Q 007317 88 ---SGAICSEHTFDGDR-CHYAAL----NLK-------VRKLLKAYEARPPP-----LGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 88 ---~ga~~~~~d~~g~~-~~~aa~----~~~-------~~~~L~~~~~~~~~-----~~~~~~g~t~l~lac~~~~~ 144 (608)
+|++++..|..|.| +|+++. +.+ ++++|+.+|+++.. +..+..|.||||+|+..++.
T Consensus 158 ~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 158 NPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred ccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 99999999999998 577775 455 99999999988721 22778899999999987764
No 90
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.54 E-value=2.2e-14 Score=138.24 Aligned_cols=121 Identities=18% Similarity=0.118 Sum_probs=109.7
Q ss_pred CCCCCCCC-CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-C
Q 007317 14 DEIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA-I 91 (608)
Q Consensus 14 ~~~~l~~~-d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~ 91 (608)
.|++++.. |..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|+ +
T Consensus 13 ~g~~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~ 84 (223)
T 2f8y_A 13 QGASLHNQTDRTGETAL--------HLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 84 (223)
T ss_dssp TTCCTTCCCTTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSC
T ss_pred cCCCcccccCCCCCchH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 47888775 89999999 99999999999999999999999999999999999999999999999999986 8
Q ss_pred cCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 ~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++..+..|.| +|+++. +.+++++|+.++.+++. .+..|.||||.|+..++.
T Consensus 85 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 85 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA--VDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC--BCTTSCBHHHHHHHTTCH
T ss_pred cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC--cCCCCCcHHHHHHHcCCH
Confidence 9999999998 567766 88999999999988766 678899999999987764
No 91
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.54 E-value=1.5e-14 Score=140.45 Aligned_cols=119 Identities=24% Similarity=0.295 Sum_probs=104.3
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC-------------CCCcHHHHHHHcCCHHHHHH
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ-------------WDSVALYYACLAGHLDAARM 84 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~-------------~g~tpLh~A~~~g~~~~v~~ 84 (608)
.+.+|..|+||| |+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++
T Consensus 68 ~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 139 (232)
T 2rfa_A 68 MTSELYEGQTAL--------HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRL 139 (232)
T ss_dssp CCSTTTTTCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHH
T ss_pred ccccCCCCcCHH--------HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHH
Confidence 377888999999 999999999999999999999998876 79999999999999999999
Q ss_pred HHhcCCCcCcccCCCCc-HHHHHh--hHHHH----HHHHhhcCCCCC----CCCcccccccccccccccch
Q 007317 85 LLESGAICSEHTFDGDR-CHYAAL--NLKVR----KLLKAYEARPPP----LGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 85 Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~----~~L~~~~~~~~~----~~~~~~g~t~l~lac~~~~~ 144 (608)
|+++|++++..|..|.| +|+++. +.+++ ++|+.+|.+... +..+..|.||+|+|+..++.
T Consensus 140 Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 140 LIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH
Confidence 99999999999999998 577776 56655 999999987631 13678899999999986664
No 92
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.54 E-value=4.2e-15 Score=127.69 Aligned_cols=105 Identities=26% Similarity=0.359 Sum_probs=93.8
Q ss_pred CCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCC
Q 007317 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDG 99 (608)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 99 (608)
.+|.+|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|
T Consensus 4 ~~d~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g 75 (115)
T 2l6b_A 4 WGSKDGNTPL--------HNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75 (115)
T ss_dssp CCSCSSCCHH--------HHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTC
T ss_pred ccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCC
Confidence 3688999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred Cc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccc
Q 007317 100 DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRD 134 (608)
Q Consensus 100 ~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~ 134 (608)
.| +++++. +.+++++|+.+|++++. ....|.+|
T Consensus 76 ~tpl~~A~~~~~~~~~~~Ll~~ga~~n~--~~~~~~~~ 111 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIVKLLDAKGADVNA--RSWGSSHH 111 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTSSSHHH--HSCCCC--
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCc--CCcccccc
Confidence 98 577777 89999999999988765 44555544
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.54 E-value=3.5e-15 Score=139.68 Aligned_cols=109 Identities=25% Similarity=0.203 Sum_probs=99.9
Q ss_pred CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc-CCCC
Q 007317 22 DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT-FDGD 100 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~ 100 (608)
+..|+||| |+|+..|+.++++.|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.
T Consensus 41 ~~~g~t~L--------~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~ 111 (183)
T 3deo_A 41 VSEYETPW--------WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHH--------HHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSC
T ss_pred CCCCCCHH--------HHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 45788888 99999999999999999 99999999999999999999999999999999999999888 8898
Q ss_pred c-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 101 R-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 101 ~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
| +|+++. +.+++++|+.+|++++. .+..|.||+|+|+..
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELGADIEV--EDERGLTALELAREI 153 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTC--CCTTSCCHHHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcCCCCcC--CCCCCCCHHHHHHHh
Confidence 7 577776 89999999999988876 788999999999863
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.54 E-value=1.9e-14 Score=147.80 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=84.3
Q ss_pred CCCCCCC-CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHhcC
Q 007317 14 DEIDLDA-SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGH---LDAARMLLESG 89 (608)
Q Consensus 14 ~~~~l~~-~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~g 89 (608)
.|+++|. +|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+ .++++.|++.+
T Consensus 119 ~g~dvn~~~d~~g~TpL--------h~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~ 190 (327)
T 1sw6_A 119 TQLNLNIPVDEHGNTPL--------HWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYL 190 (327)
T ss_dssp SCCCSCSCCSTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHH
T ss_pred cCCCcccccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhh
Confidence 3899999 899999999 99999999999999999999999999999999999999998 67777777775
Q ss_pred -CCcCcccCCCCc-HHHHHh------hHHHHHHHHhh
Q 007317 90 -AICSEHTFDGDR-CHYAAL------NLKVRKLLKAY 118 (608)
Q Consensus 90 -a~~~~~d~~g~~-~~~aa~------~~~~~~~L~~~ 118 (608)
++++..|..|.| +|+++. +.+++++|+..
T Consensus 191 ~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 191 YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 778888888887 466664 66777777665
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.53 E-value=1.9e-14 Score=125.13 Aligned_cols=94 Identities=27% Similarity=0.375 Sum_probs=86.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 29 ~~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 29 KGEDVNRTLEGGRKPL--------HYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp TTCCTTSCCTTSSCHH--------HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cCCCcCccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4889999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHhhHHHHHHH
Q 007317 94 EHTFDGDRCHYAALNLKVRKLL 115 (608)
Q Consensus 94 ~~d~~g~~~~~aa~~~~~~~~L 115 (608)
..|..|.||...|...++.++|
T Consensus 101 ~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 101 VKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp CCCTTSCCHHHHCCCHHHHHHH
T ss_pred CcCCCCCCHHHHhCCHHHHHHh
Confidence 9999999977666656655554
No 96
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.53 E-value=1.2e-14 Score=155.31 Aligned_cols=121 Identities=24% Similarity=0.245 Sum_probs=101.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|..+.+|+||| |+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 3 ~g~~~~~~~~~g~t~L--------~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 74 (437)
T 1n11_A 3 PGISGGGGGESGLTPL--------HVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74 (437)
T ss_dssp ------------CCHH--------HHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSS
T ss_pred CCCCccccCCCCCCHH--------HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 3788999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..+..|.| +|+++. +.+++++|+.+|++++. .+..|.||||.|+..++.
T Consensus 75 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~t~L~~A~~~g~~ 126 (437)
T 1n11_A 75 AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL--ATTAGHTPLHIAAREGHV 126 (437)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC--CCTTCCCHHHHHHHHTCH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC--CCCCCCcHHHHHHHcCCH
Confidence 99999998 577777 89999999999988776 678899999999986653
No 97
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.52 E-value=2.7e-14 Score=143.70 Aligned_cols=115 Identities=25% Similarity=0.257 Sum_probs=72.9
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
++.+|..|+||| |+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 52 ~~~~~~~g~t~L--------~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 123 (285)
T 3d9h_A 52 LMGDAVSDWSPM--------HEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA 123 (285)
T ss_dssp TCSSSCCSCCHH--------HHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred ccCCCccCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence 455666666766 666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 98 DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 98 ~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.|.| +|+++. +.+++++|+.++.+... ...|.||||.|+..++
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQP---ESDLASPIHEAARRGH 169 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSSC---SCTTSCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCCC---CCCCCCHHHHHHHcCC
Confidence 6665 344444 56666666666655443 2235666666665444
No 98
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.52 E-value=8e-15 Score=144.77 Aligned_cols=117 Identities=16% Similarity=0.029 Sum_probs=105.2
Q ss_pred CCCCCCC----CCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCCCCCC-----------CCCCCcHHHHHHH
Q 007317 14 DEIDLDA----SDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNAR-----------DQWDSVALYYACL 75 (608)
Q Consensus 14 ~~~~l~~----~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~in~~-----------d~~g~tpLh~A~~ 75 (608)
.|+++|. +|..|+||| |+|+.. |+.+++++|+++|++++.. |..|+||||+|+.
T Consensus 28 ~g~~i~~~~~~~d~~g~t~L--------~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 28 NSKYLTDSAYTEGSTGKTCL--------MKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIE 99 (256)
T ss_dssp HTCCTTSGGGSBTTTTBCHH--------HHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHH
T ss_pred cCCCcccccccCCCCCCCHH--------HHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHH
Confidence 3899998 899999999 999999 9999999999998877643 3689999999999
Q ss_pred cCCHHHHHHHHhcCCCcCcccCC-------------CCc-HHHHHh--hHHHHHHHHh---hcCCCCCCCCccccccccc
Q 007317 76 AGHLDAARMLLESGAICSEHTFD-------------GDR-CHYAAL--NLKVRKLLKA---YEARPPPLGPLQAALRDTF 136 (608)
Q Consensus 76 ~g~~~~v~~Ll~~ga~~~~~d~~-------------g~~-~~~aa~--~~~~~~~L~~---~~~~~~~~~~~~~g~t~l~ 136 (608)
.|+.+++++|+++|++++..+.. |.| +|+|+. +.+++++|+. +|++++. .+..|.||||
T Consensus 100 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~--~d~~g~TpLh 177 (256)
T 2etb_A 100 KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA--TDSLGNTVLH 177 (256)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCHHH
T ss_pred cCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc--cCCCCCCHHH
Confidence 99999999999999999999886 887 577777 8999999999 8888766 7889999999
Q ss_pred cccc
Q 007317 137 LGCG 140 (608)
Q Consensus 137 lac~ 140 (608)
+||.
T Consensus 178 ~A~~ 181 (256)
T 2etb_A 178 ALVM 181 (256)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9997
No 99
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.52 E-value=4e-14 Score=137.79 Aligned_cols=119 Identities=20% Similarity=0.319 Sum_probs=107.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
.+++.+|.+|+||| |+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..
T Consensus 2 ~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 73 (237)
T 3b7b_A 2 MNFKMEHQNKRSPL--------HAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK 73 (237)
T ss_dssp CCCCCSSCCSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCC
T ss_pred CCcccccCCCCCHH--------HHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCC
Confidence 57888999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcH-HHHHh--hHHHHHHHHhhc-CCCCCCCCcccccccccccccccch
Q 007317 96 TFDGDRC-HYAAL--NLKVRKLLKAYE-ARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 96 d~~g~~~-~~aa~--~~~~~~~L~~~~-~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+..|.|| |+++. +.+++++|+..+ ..... .+..|.||+|.|+..++.
T Consensus 74 ~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~ 124 (237)
T 3b7b_A 74 DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC--QDDGGWTPMIWATEYKHV 124 (237)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc--CCCCCCCHHHHHHHcCCH
Confidence 9999984 66666 899999999987 55544 677899999999986653
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=146.96 Aligned_cols=114 Identities=18% Similarity=0.226 Sum_probs=98.5
Q ss_pred CCCCCCC------CCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 007317 14 DEIDLDA------SDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (608)
Q Consensus 14 ~~~~l~~------~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~ 84 (608)
.|++++. .+..|+||| |+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++
T Consensus 173 ~g~d~~~~~~~~~~~~~g~t~L--------h~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 244 (301)
T 2b0o_E 173 NGQDFGQPLPGPDAQAPEELVL--------HLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 244 (301)
T ss_dssp TTCCTTSCEECSSSCSCEECHH--------HHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred cCCcccccCCCcccCCCCccHH--------HHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 4888888 699999999 999987 89999999999999999999999999999999999999999
Q ss_pred HHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 85 LLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 85 Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
|+++|++++..|..|.|| ++|+. +.+++++|+.++.+ .|.||||+|+..+.
T Consensus 245 Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 245 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--------TTSSCCC-------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--------CCCChhHHHHhcCC
Confidence 999999999999999985 66666 89999999998865 37899999987443
No 101
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.52 E-value=1.8e-14 Score=143.69 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=103.9
Q ss_pred CCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCC--------------CCCcHHHHHHHcCCHHHHHHH
Q 007317 20 ASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQ--------------WDSVALYYACLAGHLDAARML 85 (608)
Q Consensus 20 ~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~--------------~g~tpLh~A~~~g~~~~v~~L 85 (608)
.+|..|+||| |+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|
T Consensus 96 ~~d~~g~tpL--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 96 DSYYKGQTAL--------HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp STTTTTCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred cccCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 3677999999 999999999999999999999999997 799999999999999999999
Q ss_pred Hh---cCCCcCcccCCCCc-HHHHHh--h---------HHHHHHHHhhcCCCCC-----CCCcccccccccccccccch
Q 007317 86 LE---SGAICSEHTFDGDR-CHYAAL--N---------LKVRKLLKAYEARPPP-----LGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 86 l~---~ga~~~~~d~~g~~-~~~aa~--~---------~~~~~~L~~~~~~~~~-----~~~~~~g~t~l~lac~~~~~ 144 (608)
++ +|++++..|..|.| +|+++. + .+++++|+.+|++++. ...+..|.||||+|+..++.
T Consensus 168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 99 99999999999998 577766 3 6889999999987653 23678899999999987664
No 102
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.52 E-value=1.3e-14 Score=142.01 Aligned_cols=113 Identities=20% Similarity=0.154 Sum_probs=96.4
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.. ..|.||| |+|+..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 28 g~~~~~~-~~~~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 98 (239)
T 1ycs_B 28 GMRVKFN-PLPLALL--------LDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 98 (239)
T ss_dssp ----------CHHHH--------HHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred CCCcccC-chhhHHH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 7777754 5678888 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCccccc-cccccc
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAAL-RDTFLG 138 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~-t~l~la 138 (608)
.|..|.| +|+++. +.+++++|+.+|+++.. .+..|. ||+|+|
T Consensus 99 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~--~~~~~~~t~l~~a 144 (239)
T 1ycs_B 99 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA--MTYSDMQTAADKC 144 (239)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCSSSCCCHHHHC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce--ecCCCCcchHHHH
Confidence 9999998 577777 89999999999988876 565566 999998
No 103
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.52 E-value=2.3e-14 Score=132.30 Aligned_cols=110 Identities=21% Similarity=0.163 Sum_probs=95.8
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 59 g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 130 (172)
T 3v30_A 59 GADPHILAKERESAL--------SLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130 (172)
T ss_dssp TCCTTCCCTTCCCHH--------HHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCchhhcccCCCHH--------HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc
Confidence 899999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCccccccc
Q 007317 95 HTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRD 134 (608)
Q Consensus 95 ~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~ 134 (608)
.|..|.|| ++++. +.+++++|++++.+... ....|.||
T Consensus 131 ~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~--~~~~~~~p 171 (172)
T 3v30_A 131 EADSGYTPMDLAVALGYRKVQQVIENHILKLFQ--SNLVPADP 171 (172)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSC--C-------
T ss_pred cCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhc--ccCCCCCC
Confidence 99999985 66666 89999999999876544 33444443
No 104
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.52 E-value=3.5e-14 Score=137.23 Aligned_cols=118 Identities=19% Similarity=0.191 Sum_probs=79.2
Q ss_pred CCCCC-CCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 16 IDLDA-SDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESG--VNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 16 ~~l~~-~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.+++. ++..|+||| |+|+..|+.+++++|+++| ++++.++..|+||||+|+..|+.+++++|+++|+++
T Consensus 62 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 133 (228)
T 2dzn_A 62 VNLDDYPDDSGWTPF--------HIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV 133 (228)
T ss_dssp CCGGGCCCTTSCCHH--------HHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred ccccccCCCCCCCHH--------HHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc
Confidence 44444 566667776 7777777777777777766 666777777777777777777777777777777777
Q ss_pred CcccCCCCc-HHHHHh--hHHHHHHHHhhc-CCCCCCCCcccccccccccccccc
Q 007317 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYE-ARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~--~~~~~~~L~~~~-~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+..|..|.| +|+++. +.+++++|+.++ .+.+. .+..|.||||+|+..++
T Consensus 134 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 134 RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW--QDKQGWTPLFHALAEGH 186 (228)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC--CCTTSCCHHHHHHHTTC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC--cCCCCCCHHHHHHHcCC
Confidence 777777766 355555 666777777766 55444 55667777777776554
No 105
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.52 E-value=5.6e-14 Score=139.29 Aligned_cols=119 Identities=15% Similarity=0.105 Sum_probs=96.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++
T Consensus 58 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 128 (261)
T 2xai_A 58 HGAQVNGVTADWHTPL--------FNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNID 128 (261)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 3899999999999999 8888888888888888888888754 358888888888888888888888888888
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
..|..|.| +|+++. +.+++++|+.+|++++. +..|.||||.|+..++.
T Consensus 129 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 129 HKISHLGTPLYLACENQQRACVKKLLESGADVNQ---GKGQDSPLHAVARTASE 179 (261)
T ss_dssp CCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC---CBTTBCHHHHHHHHTCH
T ss_pred cCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC---CCCCCChHHHHHHcCCH
Confidence 88888887 466665 77888888888877663 56788888888876654
No 106
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.52 E-value=1.3e-14 Score=146.02 Aligned_cols=117 Identities=19% Similarity=0.104 Sum_probs=105.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
.++|.+|..|+||| |+|+..|+.+++++|+++|++++.++ |+||||+|+..|+.+++++|+++|++++..
T Consensus 22 ~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 91 (285)
T 3kea_A 22 KDTFKADVHGHSAS--------YYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQF 91 (285)
T ss_dssp TTTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCC
T ss_pred CCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 36899999999999 99999999999999999999999985 899999999999999999999999999999
Q ss_pred cCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccc-cccccccccccch
Q 007317 96 TFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAA-LRDTFLGCGANRQ 144 (608)
Q Consensus 96 d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g-~t~l~lac~~~~~ 144 (608)
|..|.| +|+++. +.+++++|+.+|+++.. .+..| .||||.|+..++.
T Consensus 92 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~--~~~~g~~t~L~~A~~~~~~ 142 (285)
T 3kea_A 92 DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF--YGKTGWKTSFYHAVMLNDV 142 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG--CSSSGGGSHHHHHHHTTCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc--cCCCCCCCHHHHHHHcCCH
Confidence 999998 577776 89999999999988765 67778 7999999986653
No 107
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.51 E-value=2.3e-14 Score=132.16 Aligned_cols=106 Identities=27% Similarity=0.337 Sum_probs=97.9
Q ss_pred hhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHH
Q 007317 37 VFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRK 113 (608)
Q Consensus 37 l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~ 113 (608)
|++|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+++. +.++++
T Consensus 18 l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 97 (169)
T 2y1l_E 18 LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVE 97 (169)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 49999999999999999999999999999999999999999999999999999999999999998 577777 899999
Q ss_pred HHHhhcCCCCCCCCcccccccccccccccch
Q 007317 114 LLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 114 ~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+|+.+|.+.+. .+..|.||||.|+..++.
T Consensus 98 ~Ll~~g~~~~~--~~~~g~t~L~~A~~~~~~ 126 (169)
T 2y1l_E 98 VLLKNGADVNA--NDMEGHTPLHLAAMFGHL 126 (169)
T ss_dssp HHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHHcCCCCCC--CCCCCCCHHHHHHHcCCH
Confidence 99999988766 678899999999986653
No 108
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.51 E-value=2.5e-14 Score=143.18 Aligned_cols=117 Identities=20% Similarity=0.210 Sum_probs=83.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCC-CCCC-----------------------------------
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGV-NVNA----------------------------------- 61 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~-~in~----------------------------------- 61 (608)
+|.+|..|+||| |+|+..|+.+++++|++.|+ +++.
T Consensus 104 ~n~~d~~g~T~L--------h~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~ 175 (276)
T 4hbd_A 104 VNIADSNGNTAL--------HYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI 175 (276)
T ss_dssp HTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT
T ss_pred CcCCCCCCCCHH--------HHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC
Confidence 555666666666 66666666666666666665 4444
Q ss_pred ---CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHHh-hcCCCCCCCCccccccc
Q 007317 62 ---RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLKA-YEARPPPLGPLQAALRD 134 (608)
Q Consensus 62 ---~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~-~~~~~~~~~~~~~g~t~ 134 (608)
.+..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+|+. +.+++++|+. .|++++. .+..|.||
T Consensus 176 ~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~--~d~~g~Tp 253 (276)
T 4hbd_A 176 NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL--TDRDGSTA 253 (276)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC--CCTTSCCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC--cCCCCCCH
Confidence 4455777888888888888888888888888888888887 466665 7778888887 6777665 67778888
Q ss_pred ccccccccch
Q 007317 135 TFLGCGANRQ 144 (608)
Q Consensus 135 l~lac~~~~~ 144 (608)
|++|+..++.
T Consensus 254 L~~A~~~g~~ 263 (276)
T 4hbd_A 254 LMVALDAGQS 263 (276)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCCH
Confidence 8888775543
No 109
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.51 E-value=8.9e-14 Score=120.75 Aligned_cols=99 Identities=35% Similarity=0.505 Sum_probs=93.0
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.++..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 25 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~ 96 (126)
T 1n0r_A 25 GADVNAKDKNGRTPL--------HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 96 (126)
T ss_dssp TCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCcCCCCCcHH--------HHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcc
Confidence 889999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcH-HHHHh--hHHHHHHHHhhcCC
Q 007317 95 HTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (608)
Q Consensus 95 ~d~~g~~~-~~aa~--~~~~~~~L~~~~~~ 121 (608)
.|..|.|| ++++. +.+++++|+++|++
T Consensus 97 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 97 KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999985 55555 89999999998864
No 110
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.51 E-value=6.5e-14 Score=136.41 Aligned_cols=121 Identities=21% Similarity=0.149 Sum_probs=104.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC---
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGA--- 90 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga--- 90 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|+
T Consensus 35 ~~~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 106 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPL--------HLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGT 106 (241)
T ss_dssp TTCCSCCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTS
T ss_pred cCCCCCcccccCCCHH--------HHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 4788999999999999 99999999999999999999999999999999999999999999999998887
Q ss_pred -CcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCc-ccccccccccccccch
Q 007317 91 -ICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPL-QAALRDTFLGCGANRQ 144 (608)
Q Consensus 91 -~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~-~~g~t~l~lac~~~~~ 144 (608)
+++..+..|.+ +|+++. +.+++++|+..|.+... .. ..|.||||.|+..++.
T Consensus 107 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--~~~~~g~t~L~~A~~~~~~ 163 (241)
T 1k1a_A 107 LDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA--VDIKSGRSPLIHAVENNSL 163 (241)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTTCCCHHHHHHHTTCH
T ss_pred ccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc--ccccCCCcHHHHHHHcCCH
Confidence 78888888887 466666 78899999998887765 44 6788999999876653
No 111
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.51 E-value=4.5e-14 Score=142.01 Aligned_cols=116 Identities=22% Similarity=0.326 Sum_probs=105.1
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
+|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 85 ~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (285)
T 3d9h_A 85 VNIITADHVSPL--------HEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD 156 (285)
T ss_dssp SCEECTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT
T ss_pred CCCcCCCCCCHH--------HHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC
Confidence 567899999999 999999999999999999999999999999999999999999999999999999987554
Q ss_pred CCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 98 DGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 98 ~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|.| +|+++. +.+++++|+.++.++.. .+..|.||||.|+..++.
T Consensus 157 -g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~d~~g~t~L~~A~~~~~~ 203 (285)
T 3d9h_A 157 -LASPIHEAARRGHVECVNSLIAYGGNIDH--KISHLGTPLYLACENQQR 203 (285)
T ss_dssp -TSCHHHHHHHHTCHHHHHHHHHTTCCTTC--CBTTTBCHHHHHHHTTCH
T ss_pred -CCCHHHHHHHcCCHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHcCcH
Confidence 666 677777 89999999999988766 788999999999986664
No 112
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.50 E-value=8.2e-14 Score=143.52 Aligned_cols=118 Identities=26% Similarity=0.265 Sum_probs=109.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.+++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 47 ~~~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~ 118 (351)
T 3utm_A 47 LNVNCHASDGRKSTPL--------HLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN 118 (351)
T ss_dssp TTTTCCCSSTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCcccCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 3889999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGA 141 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~ 141 (608)
..|..|.| +|+++. +.+++++|+.+|.++.. ....|.||+++++..
T Consensus 119 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~~g~~~l~~a~~~ 167 (351)
T 3utm_A 119 AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL--VNCHGKSAVDMAPTP 167 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHCSSH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc--ccCCCCcchHHHhhh
Confidence 99999998 566666 89999999999988776 678899999998763
No 113
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.50 E-value=4.5e-14 Score=150.80 Aligned_cols=119 Identities=20% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|++++.++..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 268 ~~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~ 339 (437)
T 1n11_A 268 QANGNLGNKSGLTPL--------HLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339 (437)
T ss_dssp TCCTTCCCTTCCCHH--------HHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCC
Confidence 566666666666666 777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 95 HTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 95 ~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.|..|.| +|+|+. +.+++++|+.+|+++.. .+..|.||+++|+..+.
T Consensus 340 ~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~--~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 340 KTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE--VSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC--CCSSSCCHHHHHHHTTC
T ss_pred CCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC--CCCCCCCHHHHHHHcCc
Confidence 7777776 355555 67777777777766655 56677777777765443
No 114
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.50 E-value=8.1e-14 Score=127.13 Aligned_cols=100 Identities=28% Similarity=0.354 Sum_probs=92.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-c
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI-C 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~ 92 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ +
T Consensus 59 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 130 (162)
T 1ihb_A 59 RGANPDLKDRTGFAVI--------HDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNV 130 (162)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT
T ss_pred cCCCCCCCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCC
Confidence 3899999999999999 999999999999999999999999999999999999999999999999999998 5
Q ss_pred CcccCCCCcH-HHHHh--hHHHHHHHHhhcCC
Q 007317 93 SEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (608)
Q Consensus 93 ~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~ 121 (608)
+..+..|.|| ++++. +.+++++|+.+|++
T Consensus 131 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 131 GHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 8999999985 66666 89999999998864
No 115
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.49 E-value=4.3e-14 Score=129.52 Aligned_cols=99 Identities=25% Similarity=0.383 Sum_probs=90.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 64 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 135 (165)
T 3twr_A 64 HGADVHAKDKGGLVPL--------HNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT 135 (165)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCccCCCCCCHH--------HHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh-hHHHHHHHHhhcC
Q 007317 94 EHTFDGDRC-HYAAL-NLKVRKLLKAYEA 120 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~-~~~~~~~L~~~~~ 120 (608)
..|..|.|| ++++. +.+++++|+..|+
T Consensus 136 ~~~~~g~t~l~~a~~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 136 KKNRDGNTPLDLVKDGDTDIQDLLRGDAA 164 (165)
T ss_dssp CCCTTSCCTGGGSCTTCHHHHHHHHTC--
T ss_pred ccCCCCCChhHhHhcCChHHHHHHhhccc
Confidence 999999985 55444 8899999988764
No 116
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.49 E-value=2e-14 Score=141.21 Aligned_cols=107 Identities=25% Similarity=0.218 Sum_probs=98.8
Q ss_pred CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCccc-CCCCc
Q 007317 23 FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHT-FDGDR 101 (608)
Q Consensus 23 ~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d-~~g~~ 101 (608)
..|.||| |+|+..|+.++++.|++ |+++|.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.|
T Consensus 43 ~~g~t~L--------~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETPW--------WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHH--------HHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCC
T ss_pred cCCCCHH--------HHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCC
Confidence 4678888 99999999999999999 99999999999999999999999999999999999999888 78887
Q ss_pred -HHHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 102 -CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 102 -~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
+|+++. +.+++++|+.+|++++. .+..|.||+|+|+.
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEV--EDERGLTALELARE 153 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCcHHHHHHH
Confidence 577777 89999999999988876 78899999999985
No 117
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.49 E-value=2.5e-14 Score=148.93 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=108.4
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhhcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---
Q 007317 17 DLDASDFSSSVPLKKVPNGDVFEASRAG--DVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI--- 91 (608)
Q Consensus 17 ~l~~~d~~g~tpL~~~~~~~l~~A~~~g--~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--- 91 (608)
+++.+|..|+||| |+|+..| +.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 130 ~~~~~~~~g~t~L--------~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 201 (364)
T 3ljn_A 130 GSHVKHCKGQTAL--------HWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS 201 (364)
T ss_dssp TTEEEEESCCCHH--------HHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred ccccCCCCCCCHH--------HHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence 3444888999999 9999999 99999999999999999999999999999999999999999999999
Q ss_pred --cCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 --CSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 --~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++..|..|.| +|+|+. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~--~d~~g~tpL~~A~~~g~~ 257 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNM--EDNEHTVPLYLSVRAAMV 257 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTC--CCTTSCCHHHHHHHTCCH
T ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCCHHHHHHHhChH
Confidence 9999999998 688887 89999999999998876 788999999999986654
No 118
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.48 E-value=9e-14 Score=129.36 Aligned_cols=103 Identities=21% Similarity=0.264 Sum_probs=95.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 61 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 132 (179)
T 3f6q_A 61 RGARINVMNRGDDTPL--------HLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS 132 (179)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS
T ss_pred cCCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCC
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPP 124 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~ 124 (608)
..|..|.|| ++++. +.+++++|+.+|.+++.
T Consensus 133 ~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 133 ICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp BCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred hhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 999999986 44444 78899999999988764
No 119
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.48 E-value=1.1e-13 Score=137.94 Aligned_cols=123 Identities=18% Similarity=0.197 Sum_probs=109.6
Q ss_pred CCCCCCCC-CCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDAS-DFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~-d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|++++.. +..|+||| |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 27 ~g~~~~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 98 (285)
T 1wdy_A 27 GGANVNFQEEEGGWTPL--------HNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98 (285)
T ss_dssp TTCCTTCCCTTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred cCCCcccccCCCCCcHH--------HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 37889988 88899999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCC--------cccccccccccccccch
Q 007317 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGP--------LQAALRDTFLGCGANRQ 144 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~--------~~~g~t~l~lac~~~~~ 144 (608)
+..+..|.| +|+++. +.+++++|+..|.++..... ...|.||||.|+..++.
T Consensus 99 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 99 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 999999998 466666 89999999999988765211 56788999999986553
No 120
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.48 E-value=3.5e-14 Score=140.39 Aligned_cols=120 Identities=16% Similarity=0.067 Sum_probs=102.9
Q ss_pred CCCCCCCCC----CCCCCCCCCCCchhhhHhh---hcCCHHHHHHHHHcCCC-----------CCCCCCCCCcHHHHHHH
Q 007317 14 DEIDLDASD----FSSSVPLKKVPNGDVFEAS---RAGDVDRLRYILESGVN-----------VNARDQWDSVALYYACL 75 (608)
Q Consensus 14 ~~~~l~~~d----~~g~tpL~~~~~~~l~~A~---~~g~~~~~~~Ll~~g~~-----------in~~d~~g~tpLh~A~~ 75 (608)
.|++++..+ ..|+||| |+|+ ..|+.+++++|++.|++ ++..|..|+||||+|+.
T Consensus 31 ~~~~~~~~~~~~~~~g~t~L--------~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~ 102 (260)
T 3jxi_A 31 HKKRLTDEEFREPSTGKTCL--------PKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIE 102 (260)
T ss_dssp HTCCTTSGGGSCTTTCCCHH--------HHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHH
T ss_pred cCCCcchhhhhccCCCCcHH--------HHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHH
Confidence 377788665 7799999 9999 77999999999997743 45556689999999999
Q ss_pred cCCHHHHHHHHhcCCCcCccc--------------CCCCc-HHHHHh--hHHHHHHHHh---hcCCCCCCCCcccccccc
Q 007317 76 AGHLDAARMLLESGAICSEHT--------------FDGDR-CHYAAL--NLKVRKLLKA---YEARPPPLGPLQAALRDT 135 (608)
Q Consensus 76 ~g~~~~v~~Ll~~ga~~~~~d--------------~~g~~-~~~aa~--~~~~~~~L~~---~~~~~~~~~~~~~g~t~l 135 (608)
.|+.+++++|+++|++++..+ ..|.| +|+|+. +.+++++|+. .|++++. .+..|.|||
T Consensus 103 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~--~d~~g~TpL 180 (260)
T 3jxi_A 103 RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR--QDSRGNTVL 180 (260)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCHH
T ss_pred cCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc--cCCCCCcHH
Confidence 999999999999999999998 57887 577777 8999999999 7777766 788999999
Q ss_pred cccccccc
Q 007317 136 FLGCGANR 143 (608)
Q Consensus 136 ~lac~~~~ 143 (608)
|+||...+
T Consensus 181 h~A~~~~~ 188 (260)
T 3jxi_A 181 HALVAIAD 188 (260)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhcc
Confidence 99996444
No 121
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.47 E-value=9.6e-14 Score=144.54 Aligned_cols=121 Identities=15% Similarity=0.090 Sum_probs=98.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCC--------------------------------
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNA-------------------------------- 61 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~-------------------------------- 61 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.
T Consensus 42 ~g~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 113 (364)
T 3ljn_A 42 TGVSPTIQNRFGCTAL--------HLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQM 113 (364)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCccccCCCCCcHH--------HHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCC
Confidence 3899999999999999 888888888888888888776655
Q ss_pred --------------------CCCCCCcHHHHHHHcC--CHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--hHHHHHHHH
Q 007317 62 --------------------RDQWDSVALYYACLAG--HLDAARMLLESGAICSEHTFDGDR-CHYAAL--NLKVRKLLK 116 (608)
Q Consensus 62 --------------------~d~~g~tpLh~A~~~g--~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~ 116 (608)
+|..|+||||+|+..| +.+++++|+++|++++..|..|.| +|+++. +.+++++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 193 (364)
T 3ljn_A 114 PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMM 193 (364)
T ss_dssp HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6667888888888888 888888888888888888888887 466666 788888888
Q ss_pred hhcCC-----CCCCCCcccccccccccccccch
Q 007317 117 AYEAR-----PPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 117 ~~~~~-----~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.++.+ .+. .+..|.||||+|+..++.
T Consensus 194 ~~g~~~~~~~~~~--~~~~g~t~L~~A~~~g~~ 224 (364)
T 3ljn_A 194 DTVPSKSSLRLDY--ANKQGNSHLHWAILINWE 224 (364)
T ss_dssp HHCSCSSSCCTTC--CCTTCCCTTHHHHTTTCH
T ss_pred hcccccccccccc--cCCCCCcHHHHHHHcCCH
Confidence 88776 443 677788888888876654
No 122
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.47 E-value=4.4e-14 Score=140.87 Aligned_cols=119 Identities=19% Similarity=0.111 Sum_probs=102.5
Q ss_pred CCCCC----CCCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCC-------CCC----CCCCCCcHHHHHHHc
Q 007317 15 EIDLD----ASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVN-------VNA----RDQWDSVALYYACLA 76 (608)
Q Consensus 15 ~~~l~----~~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~-------in~----~d~~g~tpLh~A~~~ 76 (608)
+++++ ..|..|+||| |+|+.. |+.+++++|+++|++ ++. +|..|+||||+|+..
T Consensus 40 ~~~~~~~~~~~~~~g~tpL--------~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~ 111 (273)
T 2pnn_A 40 KKRLTDSEFKDPETGKTCL--------LKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER 111 (273)
T ss_dssp CCCTTSGGGSCTTTCCCHH--------HHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHT
T ss_pred ccccCCcccccCcCCCCHH--------HHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHc
Confidence 55665 4588999999 999986 999999999998865 233 567899999999999
Q ss_pred CCHHHHHHHHhcCCCcCcccC--------------CCCc-HHHHHh--hHHHHHHHHh---hcCCCCCCCCccccccccc
Q 007317 77 GHLDAARMLLESGAICSEHTF--------------DGDR-CHYAAL--NLKVRKLLKA---YEARPPPLGPLQAALRDTF 136 (608)
Q Consensus 77 g~~~~v~~Ll~~ga~~~~~d~--------------~g~~-~~~aa~--~~~~~~~L~~---~~~~~~~~~~~~~g~t~l~ 136 (608)
|+.+++++|+++|++++..+. .|.| +|+++. +.+++++|+. +|++++. .+..|.||||
T Consensus 112 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~--~d~~g~tpLh 189 (273)
T 2pnn_A 112 RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA--RDSVGNTVLH 189 (273)
T ss_dssp TCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC--CCTTSCCHHH
T ss_pred CCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee--eCCCCCcHHH
Confidence 999999999999999999987 6887 577777 8999999999 7887766 7889999999
Q ss_pred ccccccc
Q 007317 137 LGCGANR 143 (608)
Q Consensus 137 lac~~~~ 143 (608)
+||..++
T Consensus 190 ~A~~~~~ 196 (273)
T 2pnn_A 190 ALVEVAD 196 (273)
T ss_dssp HHHHHCC
T ss_pred HHHHccC
Confidence 9997555
No 123
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.47 E-value=2e-13 Score=123.79 Aligned_cols=96 Identities=21% Similarity=0.290 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++
T Consensus 57 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~ 127 (156)
T 1bd8_A 57 QGASPNVQDTSGTSPV--------HDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH 127 (156)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT
T ss_pred CCCCCCCcCCCCCCHH--------HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC
Confidence 3899999999999999 999999999999999999999999999999999999999999999999999 9999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHHHhh
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLLKAY 118 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L~~~ 118 (608)
..|..|.|| ++|+. +.+++++|+++
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 128 RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999985 66666 88999998764
No 124
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.46 E-value=2e-13 Score=123.53 Aligned_cols=94 Identities=22% Similarity=0.299 Sum_probs=87.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 56 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 127 (153)
T 1awc_B 56 AGVSRDARTKVDRTPL--------HMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 127 (153)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCCCCCCCCCHH--------HHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH-HHHHh--hHHHHHHH
Q 007317 94 EHTFDGDRC-HYAAL--NLKVRKLL 115 (608)
Q Consensus 94 ~~d~~g~~~-~~aa~--~~~~~~~L 115 (608)
..|..|.|| ++++. +.+++++|
T Consensus 128 ~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 128 TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999985 55555 78888776
No 125
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.46 E-value=1e-13 Score=150.68 Aligned_cols=111 Identities=18% Similarity=0.252 Sum_probs=92.8
Q ss_pred CCCCCCCC------CCCCCCCCCCCCchhhhHhhh---cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 007317 14 DEIDLDAS------DFSSSVPLKKVPNGDVFEASR---AGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARM 84 (608)
Q Consensus 14 ~~~~l~~~------d~~g~tpL~~~~~~~l~~A~~---~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~ 84 (608)
.|+++|.+ |..|+||| |+||. .|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++
T Consensus 154 ~g~~~n~~~~~~~~~~~g~t~L--------h~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 154 NGQDFGQPLPGPDAQAPEELVL--------HLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp TTCCSSSCBCCSSSCCSCBCHH--------HHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred hcccccCCCCCcccccccchHH--------HHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 48899888 89999999 99955 999999999999999999999999999999999999999999
Q ss_pred HHhcCCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCCCCccccccccccccc
Q 007317 85 LLESGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCG 140 (608)
Q Consensus 85 Ll~~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~ 140 (608)
|+++|++++..|..|.|| |+|+. +.+++++|+.+|+++.. +|+|.++.
T Consensus 226 Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~--------~~~h~~~~ 276 (497)
T 3lvq_E 226 LLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA--------FPLHVDYS 276 (497)
T ss_dssp HHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC--------Ccceeecc
Confidence 999999999999999985 66666 89999999999988654 57776553
No 126
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.46 E-value=5.6e-14 Score=140.71 Aligned_cols=109 Identities=16% Similarity=0.124 Sum_probs=78.9
Q ss_pred CCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CcCcccCCCC
Q 007317 24 SSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVN--VNARDQWDSVALYYACLAGHLDAARMLLESGA-ICSEHTFDGD 100 (608)
Q Consensus 24 ~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~--in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga-~~~~~d~~g~ 100 (608)
.+++++ |.|+..|+.+.++.+++.+.+ +|.+|..|+||||+|+..|+.+++++|+++|+ +++..+..|.
T Consensus 75 ~~~~~l--------~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~ 146 (276)
T 4hbd_A 75 ACRSDA--------HPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGY 146 (276)
T ss_dssp HHSTTC--------CHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred HhccCC--------CHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCC
Confidence 367888 999999999999999987766 89999999999999999999999999999997 8888777766
Q ss_pred c-HHHHH-----h--hHHHHHHHHhhcCCCCCCCCccccccccccccccc
Q 007317 101 R-CHYAA-----L--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGAN 142 (608)
Q Consensus 101 ~-~~~aa-----~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~ 142 (608)
| +++++ . +.+++++|+..|..... .+..|.||||.|+..+
T Consensus 147 tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~--~~~~g~tpLh~A~~~g 194 (276)
T 4hbd_A 147 SPIMLTALATLKTQDDIETVLQLFRLGNINAK--ASQAGQTALMLAVSHG 194 (276)
T ss_dssp CHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCC--CTTTCCCHHHHHHHTT
T ss_pred CHHHHHHHHHhhhhhhHHHHHHHHHcCCCccc--cCCCCCCHHHHHHHcC
Confidence 5 34444 1 33444444444433322 3334444444444433
No 127
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.46 E-value=7.4e-14 Score=136.58 Aligned_cols=103 Identities=20% Similarity=0.229 Sum_probs=94.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 59 ~g~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 130 (239)
T 1ycs_B 59 EVDDPSLPNDEGITAL--------HNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130 (239)
T ss_dssp TTSSCCCCCTTSCCHH--------HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 4889999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC-cHHHHH---h--hHHHHHHHHhhcCCCCC
Q 007317 94 EHTFDGD-RCHYAA---L--NLKVRKLLKAYEARPPP 124 (608)
Q Consensus 94 ~~d~~g~-~~~~aa---~--~~~~~~~L~~~~~~~~~ 124 (608)
..+..|. |+...| . +.+++++|+.++.+...
T Consensus 131 ~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 131 AMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred eecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 9998877 765544 2 68899999999887765
No 128
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.45 E-value=2.4e-13 Score=136.20 Aligned_cols=97 Identities=19% Similarity=0.250 Sum_probs=90.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRA---GDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
++..+..|+||| |+|+.. |+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 162 l~~~~~~g~t~L--------h~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 233 (278)
T 1dcq_A 162 LANGHEPDETAL--------HLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEI 233 (278)
T ss_dssp CSSCSSTTCBHH--------HHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred ccccccCCCCcc--------hHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 556689999999 999999 899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcH-HHHHh--hHHHHHHHHhhcCCC
Q 007317 95 HTFDGDRC-HYAAL--NLKVRKLLKAYEARP 122 (608)
Q Consensus 95 ~d~~g~~~-~~aa~--~~~~~~~L~~~~~~~ 122 (608)
.|..|.|| |+|+. +.+++++|+.+|+..
T Consensus 234 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 234 ANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999985 66666 899999999998754
No 129
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.45 E-value=6.1e-14 Score=141.09 Aligned_cols=117 Identities=15% Similarity=0.170 Sum_probs=100.9
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc
Q 007317 15 EIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSE 94 (608)
Q Consensus 15 ~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~ 94 (608)
|+++|.++ |+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 54 g~~~~~~~--g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 123 (285)
T 3kea_A 54 GALKNLLE--NEFPL--------HQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF 123 (285)
T ss_dssp TGGGSCCT--TCCHH--------HHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG
T ss_pred CCCCCCCC--CCCHH--------HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc
Confidence 78888774 89999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-Cc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 95 HTFDG-DR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 95 ~d~~g-~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
.+..| .| +|+++. +.+++++|+.++..... ...|.||||.|+..++.
T Consensus 124 ~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~g~~ 174 (285)
T 3kea_A 124 YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD---LAILLSCIHITIKNGHV 174 (285)
T ss_dssp CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC---CSTHHHHHHHHHHTTCH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc---ccCCccHHHHHHHcChH
Confidence 99988 56 566666 88899999998876522 23788999999987764
No 130
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.45 E-value=5.7e-14 Score=124.61 Aligned_cols=95 Identities=23% Similarity=0.226 Sum_probs=84.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 32 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (137)
T 3c5r_A 32 NGSDPNVKDHAGWTPL--------HEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103 (137)
T ss_dssp TTCCSCCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCcCCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcHHHHHh---hHHHHHHHH
Q 007317 94 EHTFDGDRCHYAAL---NLKVRKLLK 116 (608)
Q Consensus 94 ~~d~~g~~~~~aa~---~~~~~~~L~ 116 (608)
..|..|.||...|. ..+++.+|.
T Consensus 104 ~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 104 AVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp CCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred CCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 99999998655555 344444433
No 131
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.44 E-value=2.8e-13 Score=139.49 Aligned_cols=121 Identities=23% Similarity=0.276 Sum_probs=106.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 80 ~g~~~~~~~~~g~t~L--------~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (351)
T 3utm_A 80 HGADVHAKDKGGLVPL--------HNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT 151 (351)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCCccCCCCCcHH--------HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4899999999999999 99999999999999999999999999999999999999999999999999999988
Q ss_pred cccCCC------------------------------------------------------Cc-HHHHHh-----hHHHHH
Q 007317 94 EHTFDG------------------------------------------------------DR-CHYAAL-----NLKVRK 113 (608)
Q Consensus 94 ~~d~~g------------------------------------------------------~~-~~~aa~-----~~~~~~ 113 (608)
..+..| .| +|+++. ..++++
T Consensus 152 ~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~ 231 (351)
T 3utm_A 152 LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAE 231 (351)
T ss_dssp CCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHH
T ss_pred cccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHH
Confidence 766444 34 455554 367899
Q ss_pred HHHhhcCCCCCCCCcccccccccccccccch
Q 007317 114 LLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 114 ~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+|+..|.+++. .+..|.||||+|+..++.
T Consensus 232 ~Ll~~g~~~~~--~~~~g~t~L~~A~~~g~~ 260 (351)
T 3utm_A 232 LLLRKGANVNE--KNKDFMTPLHVAAERAHN 260 (351)
T ss_dssp HHHHTTCCTTC--CCTTCCCHHHHHHHTTCH
T ss_pred HHHHcCCCcCC--cCCCCCCHHHHHHHcCCH
Confidence 99999988766 678899999999986664
No 132
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.44 E-value=2.1e-13 Score=142.69 Aligned_cols=123 Identities=17% Similarity=0.126 Sum_probs=110.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC---C
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESG---A 90 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g---a 90 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++| +
T Consensus 155 ~ga~vn~~d~~g~TpL--------~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 155 AGADVNAMDCDENTPL--------MLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp TCCCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred cCCCCcCCCCCCCCHH--------HHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 5899999999999999 9999999999999999999999999999999999999999999999999988 8
Q ss_pred CcCcccCCCCc-HHHHHh-----hHHHHHHHHhhcCCCCCC------CCcccccccccccccccch
Q 007317 91 ICSEHTFDGDR-CHYAAL-----NLKVRKLLKAYEARPPPL------GPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 91 ~~~~~d~~g~~-~~~aa~-----~~~~~~~L~~~~~~~~~~------~~~~~g~t~l~lac~~~~~ 144 (608)
+++..|..|.| +|+++. +.+++++|+.+|.+.... ..+..|.||||.|+..++.
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~ 292 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM 292 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH
Confidence 99999999998 566665 578899999999887641 2355799999999987664
No 133
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.43 E-value=4.7e-13 Score=133.40 Aligned_cols=120 Identities=22% Similarity=0.195 Sum_probs=108.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 61 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 132 (285)
T 1wdy_A 61 HGADPVLRKKNGATPF--------LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 132 (285)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred cCCCCcccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cc----------cCCCCc-HHHHHh--hHHHHHHHHhh-cCCCCCCCCcccccccccccccccc
Q 007317 94 EH----------TFDGDR-CHYAAL--NLKVRKLLKAY-EARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 94 ~~----------d~~g~~-~~~aa~--~~~~~~~L~~~-~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
.. +..|.+ +|.++. +.+++++|+.. +.+++. .+..|.||+|.|+..+.
T Consensus 133 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~g~t~l~~a~~~~~ 194 (285)
T 1wdy_A 133 LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA--CDNMGRNALIHALLSSD 194 (285)
T ss_dssp CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTC--CCTTSCCHHHHHHHCSC
T ss_pred cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCc--cCCCCCCHHHHHHHccc
Confidence 87 677877 566766 88999999986 877765 67889999999987665
No 134
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.43 E-value=5e-13 Score=129.71 Aligned_cols=120 Identities=21% Similarity=0.174 Sum_probs=101.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|++++.++..|.||| |+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|+++
T Consensus 31 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 102 (240)
T 3eu9_A 31 AGYDVRQPDKENVTLL--------HWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP 102 (240)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred cCCCcCCCCCCCCCHH--------HHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC
Confidence 4788899999999999 99999999999999999998887655 45899999999999999999999999999
Q ss_pred CcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 93 SEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 93 ~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
+..+..|.+ ++.++. +.+++++|+.++.++.. .+..|.||+|.|+..+.
T Consensus 103 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 103 SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM--MDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHHCC
T ss_pred cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccc--cCCCCCcHHHHHHHhCC
Confidence 988888887 466666 78889999998887665 67788899999885333
No 135
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.42 E-value=3e-13 Score=115.20 Aligned_cols=90 Identities=29% Similarity=0.392 Sum_probs=79.0
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccC
Q 007317 18 LDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTF 97 (608)
Q Consensus 18 l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~ 97 (608)
....|.+|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..|.
T Consensus 17 ~~~~~~~g~t~L--------~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 88 (110)
T 2zgd_A 17 GSHMGSDLGKKL--------LEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK 88 (110)
T ss_dssp -----CCHHHHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ccccCCccchHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc
Confidence 344577899999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcH-HHHHh--hHHHHHHH
Q 007317 98 DGDRC-HYAAL--NLKVRKLL 115 (608)
Q Consensus 98 ~g~~~-~~aa~--~~~~~~~L 115 (608)
.|.|+ ++|+. +.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 99985 66666 77777776
No 136
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.42 E-value=2.1e-13 Score=131.57 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=85.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILES-GVNVNARDQWDSVALYYACLAGHLDAARMLLESGAIC 92 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 92 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++ |++++.+|..|+||||+|+..|+.+++++|+++|+++
T Consensus 95 ~g~~~~~~~~~g~t~L--------~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 95 NRVGVNGLDKAGSTAL--------YWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred CCCCccccCCCCCCHH--------HHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4899999999999999 999999999999999998 9999999999999999999999999999999999999
Q ss_pred CcccCCCCcHHHHHh---hHHHHHHHHhhcCCCCC
Q 007317 93 SEHTFDGDRCHYAAL---NLKVRKLLKAYEARPPP 124 (608)
Q Consensus 93 ~~~d~~g~~~~~aa~---~~~~~~~L~~~~~~~~~ 124 (608)
+..|..|.|+...|. +.++++.|...+.....
T Consensus 167 ~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 167 DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 999999999655554 67777777777766543
No 137
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.41 E-value=7.6e-13 Score=120.31 Aligned_cols=141 Identities=13% Similarity=0.108 Sum_probs=98.6
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCC-CCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLP-GDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~-~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
|+|+. +|+.|.+||.+ |+.|+||++||.+. ++. ++....|.++++++.+++.|++|+|++.-.+.+...
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~--------~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~ 73 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL--------GMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPED 73 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSS--------CSS------CEECTTSCHHHHHHHHHHHHHTTTCCC----
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhc--------CCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCccc
Confidence 67765 89999999999 89999999999861 222 334568999999999999999999998742111100
Q ss_pred ccccchhhHhhhcCCCCC-----CCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCchH
Q 007317 423 VCCNSVTWLVALGSNLPN-----FVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVFK 497 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~~ 497 (608)
. +.. .......+. ..-..+++.+|+.||++|++..|...|++++...+.+.|++.+-.++.+...+...+
T Consensus 74 ~---~~~--~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 74 D---ENK--EKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp ------------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred c---ccc--ccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 0 000 000000000 001135999999999999999999999999999998889999888888877776554
Q ss_pred HH
Q 007317 498 VR 499 (608)
Q Consensus 498 L~ 499 (608)
..
T Consensus 149 e~ 150 (159)
T 2ast_A 149 EA 150 (159)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 138
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.41 E-value=6e-13 Score=138.31 Aligned_cols=112 Identities=21% Similarity=0.174 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCCchhhhHhhhc-CCHHHHHHHHHcCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCC
Q 007317 22 DFSSSVPLKKVPNGDVFEASRA-GDVDRLRYILESGVNVNARD--QWDSVALYYACLAGHLDAARMLLESGAICSEHTFD 98 (608)
Q Consensus 22 d~~g~tpL~~~~~~~l~~A~~~-g~~~~~~~Ll~~g~~in~~d--~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~ 98 (608)
+..+.|+| |+|+.. |+.++++.|+++|+++|..+ ..|+||||+|+..|+.+++++|+++|++++..|..
T Consensus 196 ~~~~~t~L--------~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~ 267 (368)
T 3jue_A 196 SLHPGALL--------FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSA 267 (368)
T ss_dssp -CCHHHHH--------HHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cCCCCcHH--------HHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC
Confidence 34455666 777776 77777777777777777766 66777777777777777777777777777777777
Q ss_pred CCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccc
Q 007317 99 GDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANR 143 (608)
Q Consensus 99 g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~ 143 (608)
|.| +|+++. +.+++++|+.+|++++. .+..|.||||+|+..++
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~Gad~~~--~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRGADLGA--RDSEGRDPLTIAMETAN 313 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCcCCCCC--cCCCCCCHHHHHHHCCC
Confidence 776 455555 66677777777666655 56667777777776555
No 139
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.41 E-value=3e-13 Score=141.54 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=105.6
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhhcC---CHHHHHHHHHcCCCCCC--------CCCCCCcHHHHHHHcCCHHHHHH
Q 007317 16 IDLDASDFSSSVPLKKVPNGDVFEASRAG---DVDRLRYILESGVNVNA--------RDQWDSVALYYACLAGHLDAARM 84 (608)
Q Consensus 16 ~~l~~~d~~g~tpL~~~~~~~l~~A~~~g---~~~~~~~Ll~~g~~in~--------~d~~g~tpLh~A~~~g~~~~v~~ 84 (608)
++++..|..|+||| |+|+..| +.+++++|+++|++++. .|..|+||||+|+..|+.+++++
T Consensus 226 ~~~~~~d~~g~t~L--------~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~ 297 (373)
T 2fo1_E 226 GDIEELDRNGMTAL--------MIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY 297 (373)
T ss_dssp HTTSCCCTTSCCHH--------HHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHH
T ss_pred cChhhcCCCCCCHH--------HHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHH
Confidence 57777888888888 9999988 89999999999999886 57789999999999999999999
Q ss_pred HHhcC-CCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 85 LLESG-AICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 85 Ll~~g-a~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|+++| ++++..|..|.| +|+|+. +.+++++|+.+|++++. .+..|.||+++|+..++.
T Consensus 298 Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~--~d~~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 298 LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA--VDATDHTARQLAQANNHH 359 (373)
T ss_dssp HHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--CCSSSCCHHHHHHHTTCH
T ss_pred HHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccC--CCCCCCCHHHHHHHcCCH
Confidence 99875 999999999998 577776 89999999999998876 788899999999986653
No 140
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.41 E-value=5.9e-13 Score=129.19 Aligned_cols=119 Identities=17% Similarity=0.143 Sum_probs=78.4
Q ss_pred CCCCCCCC-CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 15 EIDLDASD-FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 15 ~~~l~~~d-~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
|.+++..+ ..|+||| |+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++
T Consensus 65 ~~~~~~~~~~~~~t~L--------~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~ 136 (240)
T 3eu9_A 65 GAIVDQLGGDLNSTPL--------HWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD 136 (240)
T ss_dssp TCCTTCCBTTTTBCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCcchhhcCCcCCChh--------HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc
Confidence 55555433 3477777 77777777777777777777777777777777777777777777777777777777
Q ss_pred cccCCCCc-HHHHHh---hHHHHHHHHhhcCCCCCCCCcc-cccccccccccccc
Q 007317 94 EHTFDGDR-CHYAAL---NLKVRKLLKAYEARPPPLGPLQ-AALRDTFLGCGANR 143 (608)
Q Consensus 94 ~~d~~g~~-~~~aa~---~~~~~~~L~~~~~~~~~~~~~~-~g~t~l~lac~~~~ 143 (608)
..+..|.+ +|+++. ...++++|+..+.+... ... .|.||||.|+..++
T Consensus 137 ~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~--~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 137 MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNL--GDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp CCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTC--CCTTTCCCHHHHHHHHTC
T ss_pred ccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcch--hhccCCCcHHHHHHHcCC
Confidence 77777765 355553 25566666666666554 333 56677777766554
No 141
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.40 E-value=9.6e-13 Score=129.11 Aligned_cols=107 Identities=21% Similarity=0.161 Sum_probs=92.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 13 ~~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
++|+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.++ ..|+||||+|+..|+.+++++|+++|++
T Consensus 65 l~~~~~~~~d~~g~t~L--------~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 136 (244)
T 3ui2_A 65 LEDRDVDAVDENGRTAL--------LFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136 (244)
T ss_dssp TTTCCTTCBCTTSCBHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCCCCCcCCCCCCHH--------HHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 35899999999999999 99999999999999999999999998 7899999999999999999999999999
Q ss_pred cCcccCCCCcH-HHHHhhHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 92 CSEHTFDGDRC-HYAALNLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 92 ~~~~d~~g~~~-~~aa~~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
++..|..|.|| |+++.. .. ...+.||+++|+..++.
T Consensus 137 ~~~~d~~g~t~l~~A~~~-------~~----------~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 137 IEVEDERGLTALELAREI-------LK----------TTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp TTCCCTTCCCHHHHHHHH-------HT----------TCCCSSHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHHH-------Hh----------ccCCCCHHHHHHHcChH
Confidence 99999999985 555320 01 12367899988876554
No 142
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.39 E-value=2.6e-13 Score=127.43 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=88.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCC------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHHcC-----CHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGD------VDRLRYILESGVNVNARDQWDS-VALYYACLAG-----HLDA 81 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~------~~~~~~Ll~~g~~in~~d~~g~-tpLh~A~~~g-----~~~~ 81 (608)
.|+++|.+|..|+||| |+|+..|+ .+++++|+++|+++|.+|..|+ ||||+|+..+ +.++
T Consensus 64 ~Gadvn~~d~~g~TpL--------h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~i 135 (186)
T 3t8k_A 64 KGADIKSRTKEGTTLF--------FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPL 135 (186)
T ss_dssp TTCCSSCCCTTCCCTH--------HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCCcHH--------HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHH
Confidence 4999999999999999 99999987 6889999999999999999999 9999999944 4679
Q ss_pred HHHHHh-cCCCcCcccCCCCcH-HHHHh--hHHHHHHHHhhcCC
Q 007317 82 ARMLLE-SGAICSEHTFDGDRC-HYAAL--NLKVRKLLKAYEAR 121 (608)
Q Consensus 82 v~~Ll~-~ga~~~~~d~~g~~~-~~aa~--~~~~~~~L~~~~~~ 121 (608)
+++|++ +|++++..|..|.|| ++++. +.+++++|..+..+
T Consensus 136 v~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 136 YKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999 999999999999985 66666 78888888876543
No 143
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.38 E-value=7.7e-13 Score=136.10 Aligned_cols=116 Identities=22% Similarity=0.161 Sum_probs=89.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCC----HHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc-
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGD----VDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLES- 88 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~----~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~- 88 (608)
.|+++|.+|..|+||+ |+++..++ ..++++|+++|+++|.+|..|+||||+|+..|+.+++++|+..
T Consensus 191 ~gad~n~~d~~g~t~l--------~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~ 262 (337)
T 4g8k_A 191 MGADVNACDNMGRNAL--------IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 262 (337)
T ss_dssp SCCCTTCCCTTSCCHH--------HHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST
T ss_pred cCCCcCccCCCCCcHH--------HHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc
Confidence 3788888888888888 76654433 3567778888888888888888888888888888888888864
Q ss_pred CCCcCcccCCCCc-HHHHHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 89 GAICSEHTFDGDR-CHYAAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 89 ga~~~~~d~~g~~-~~~aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|++++..|..|.| +|+|+. +.+++++|+.+|++++. .+|||.|+..++.
T Consensus 263 ~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-------~~~L~~A~~~~~~ 314 (337)
T 4g8k_A 263 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-------GDLVMTARRNYDH 314 (337)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-------CCHHHHHHHTTCH
T ss_pred CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------CCHHHHHHHcCCH
Confidence 7888888888887 466666 78888888888876543 4688888876653
No 144
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.38 E-value=8.6e-13 Score=123.29 Aligned_cols=87 Identities=24% Similarity=0.237 Sum_probs=81.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 13 LDEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARD-QWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 13 ~~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
++|+++|.+|..|+||| |+|+..|+.+++++|+++|+++|.++ ..|+||||+|+..|+.+++++|+++|++
T Consensus 64 l~~~~~~~~d~~g~t~L--------~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 135 (183)
T 3deo_A 64 LEDRDVDAVDENGRTAL--------LFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 135 (183)
T ss_dssp TTTSCTTCCCTTSCCHH--------HHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HhcCCCCCcCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Confidence 34899999999999999 99999999999999999999999998 8999999999999999999999999999
Q ss_pred cCcccCCCCcH-HHHHh
Q 007317 92 CSEHTFDGDRC-HYAAL 107 (608)
Q Consensus 92 ~~~~d~~g~~~-~~aa~ 107 (608)
++..|..|.|| ++++.
T Consensus 136 ~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 136 IEVEDERGLTALELARE 152 (183)
T ss_dssp TTCCCTTSCCHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHH
Confidence 99999999986 55543
No 145
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.38 E-value=2.9e-12 Score=131.80 Aligned_cols=121 Identities=24% Similarity=0.277 Sum_probs=105.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCC----------CCCCCcHHHHHHHcCCHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNAR----------DQWDSVALYYACLAGHLDAAR 83 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~----------d~~g~tpLh~A~~~g~~~~v~ 83 (608)
.+++++.+|..|+||| |+|+..|+.+++++|+++|++++.+ +..|.||||+|+..|+.++++
T Consensus 114 ~~~~~~~~d~~g~t~l--------~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~ 185 (337)
T 4g8k_A 114 KGADVNECDFYGFTAF--------MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLK 185 (337)
T ss_dssp TTCCTTCBCTTCCBHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHH
T ss_pred ccchhhhhccCCCCHH--------HHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHH
Confidence 4788999999999999 9999999999999999999988764 346899999999999999999
Q ss_pred HHHh-cCCCcCcccCCCCc-HHHHHh------hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 84 MLLE-SGAICSEHTFDGDR-CHYAAL------NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 84 ~Ll~-~ga~~~~~d~~g~~-~~~aa~------~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+|++ .|++++..|..|.+ +++++. ...++++|+.+|++++. ++..|.||||.|+..+..
T Consensus 186 ~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~--~d~~g~t~L~~a~~~~~~ 252 (337)
T 4g8k_A 186 ILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV--RGERGKTPLILAVEKKHL 252 (337)
T ss_dssp HHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTC--CCGGGCCHHHHHHHTTCH
T ss_pred HHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCC--cCCCCCCHHHHHHHhhhh
Confidence 9996 69999999999997 555554 35688999999998876 788999999999986654
No 146
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.37 E-value=7.1e-13 Score=137.76 Aligned_cols=114 Identities=21% Similarity=0.210 Sum_probs=87.9
Q ss_pred CCCCC--CCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcc
Q 007317 18 LDASD--FSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEH 95 (608)
Q Consensus 18 l~~~d--~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~ 95 (608)
+|..+ ..|+||| |+|+..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+++|++++..
T Consensus 226 vn~~~~~~~g~TpL--------h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~ 297 (368)
T 3jue_A 226 VNWVNGGQDNATPL--------IQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGAR 297 (368)
T ss_dssp TTCCCTTTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCccccccCCCCHH--------HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCc
Confidence 45566 7899999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcH-HHHHh--hHHHHHHHHhhcCCCCCC-CCcccccccccccc
Q 007317 96 TFDGDRC-HYAAL--NLKVRKLLKAYEARPPPL-GPLQAALRDTFLGC 139 (608)
Q Consensus 96 d~~g~~~-~~aa~--~~~~~~~L~~~~~~~~~~-~~~~~g~t~l~lac 139 (608)
|..|.|| ++|+. +.+++++|+..+...... .....+.|++.+..
T Consensus 298 d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 298 DSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 9999985 66666 899999999887553321 23345666666533
No 147
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.37 E-value=1.1e-12 Score=107.90 Aligned_cols=70 Identities=36% Similarity=0.601 Sum_probs=67.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAI 91 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 91 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 24 ~g~~~n~~d~~g~t~L--------~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 24 AGADVNAKDKNGRTPL--------HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TTCCTTCCCTTSCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cCCCCcccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4899999999999999 999999999999999999999999999999999999999999999999999985
No 148
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.33 E-value=2.5e-12 Score=139.84 Aligned_cols=108 Identities=18% Similarity=0.166 Sum_probs=99.0
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHhcCCCcCcccCCCCc-HHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNAR------DQWDSVALYYACL---AGHLDAARMLLESGAICSEHTFDGDR-CHY 104 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~~------d~~g~tpLh~A~~---~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~ 104 (608)
..||.|+..|+.+.++.|++.|+++|.+ |..|+||||+|+. .|+.+++++|+++|++++..|..|.| +|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 4579999999999999999999999988 8899999999976 99999999999999999999999998 577
Q ss_pred HHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 105 aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|+. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGT--VNEAGETALDIARKKHHK 253 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSC--CCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCH
Confidence 777 89999999999999877 788999999999986664
No 149
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.33 E-value=1.2e-12 Score=112.14 Aligned_cols=81 Identities=22% Similarity=0.356 Sum_probs=76.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcC
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICS 93 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 93 (608)
.|++++.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 31 ~g~~~~~~d~~g~t~L--------~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 31 KGADVNARSKDGNTPL--------HLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTCCSSCCCSSSCCTT--------HHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH
T ss_pred cCCCCCCcCCCCCCHH--------HHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 3899999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcH
Q 007317 94 EHTFDGDRC 102 (608)
Q Consensus 94 ~~d~~g~~~ 102 (608)
..+..|.++
T Consensus 103 ~~~~~~~~~ 111 (115)
T 2l6b_A 103 ARSWGSSHH 111 (115)
T ss_dssp HHSCCCC--
T ss_pred cCCcccccc
Confidence 999998864
No 150
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.30 E-value=7.3e-12 Score=125.35 Aligned_cols=108 Identities=20% Similarity=0.185 Sum_probs=97.3
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCC------CCCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcCcccCCCCc-HHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNV------NARDQWDSVALYYACLA---GHLDAARMLLESGAICSEHTFDGDR-CHY 104 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~i------n~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~ 104 (608)
..|+.|+..|+.+.++.+++.|+++ +..|..|+||||+|+.. |+.+++++|+++|++++..|..|.| +|+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 3569999999999999999999984 45588999999999999 9999999999999999999999998 577
Q ss_pred HHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 105 aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|+. +.+++++|+.+|++++. .+..|.||||+|+..++.
T Consensus 212 A~~~g~~~~v~~Ll~~gad~~~--~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKASIEI--ANESGETPLDIAKRLKHE 251 (278)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC--CCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCC--ccCCCCCHHHHHHHcCCH
Confidence 777 89999999999998877 788999999999987664
No 151
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.30 E-value=5e-12 Score=128.07 Aligned_cols=108 Identities=18% Similarity=0.167 Sum_probs=98.3
Q ss_pred hhhhHhhhcCCHHHHHHHHHcCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCcCcccCCCCc-HHH
Q 007317 35 GDVFEASRAGDVDRLRYILESGVNVNA------RDQWDSVALYYACLA---GHLDAARMLLESGAICSEHTFDGDR-CHY 104 (608)
Q Consensus 35 ~~l~~A~~~g~~~~~~~Ll~~g~~in~------~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~ 104 (608)
..|+.|+..|+.+.++.|++.|++++. .+..|+||||+|+.. |+.+++++|+++|++++..|..|.| +|+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 346999999999999999999999998 688999999999997 8999999999999999999999998 577
Q ss_pred HHh--hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 105 AAL--NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 105 aa~--~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
|+. +.+++++|+.+|++++. .+..|.|||++|+..+..
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~--~d~~G~TpL~~A~~~~~~ 272 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGT--VNEAGETALDIARKKHHK 272 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSC--CCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCC--cCCCCCCHHHHHHHcCCH
Confidence 777 89999999999998876 788999999999986664
No 152
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.14 E-value=1.9e-11 Score=125.26 Aligned_cols=125 Identities=12% Similarity=-0.027 Sum_probs=95.7
Q ss_pred CCCCCCCCCCCCCCCCCC-------------CCc-hhh-----------------------hHhhhcCCHHHHHHHHHcC
Q 007317 14 DEIDLDASDFSSSVPLKK-------------VPN-GDV-----------------------FEASRAGDVDRLRYILESG 56 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~-------------~~~-~~l-----------------------~~A~~~g~~~~~~~Ll~~g 56 (608)
.|++++.++..|.|+++. .++ ..+ |.|+..+..++++.|++.|
T Consensus 41 ~ga~i~~~~~~g~~~~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g 120 (327)
T 1sw6_A 41 SPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQ 120 (327)
T ss_dssp SSCCCEECBCCCCCCCHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSC
T ss_pred CCcccccCCCCCCcccCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcC
Confidence 399999999999999751 011 111 3444455566777777788
Q ss_pred CCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCcccCCCCc-HHHHHh--h---HHHHHHHHhhc-CCCCCCCCc
Q 007317 57 VNVNA-RDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDR-CHYAAL--N---LKVRKLLKAYE-ARPPPLGPL 128 (608)
Q Consensus 57 ~~in~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~~-~~~aa~--~---~~~~~~L~~~~-~~~~~~~~~ 128 (608)
+++|. +|..|+||||+|+..|+.+++++|+++|++++..|..|.| +|+++. + .+++..|+..+ .+... .+
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~--~d 198 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL--ED 198 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE--EC
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC--CC
Confidence 99999 8999999999999999999999999999999999999998 577776 3 35556666655 33433 67
Q ss_pred cccccccccccc
Q 007317 129 QAALRDTFLGCG 140 (608)
Q Consensus 129 ~~g~t~l~lac~ 140 (608)
..|.||||+|+.
T Consensus 199 ~~g~tpLh~A~~ 210 (327)
T 1sw6_A 199 SMNRTILHHIII 210 (327)
T ss_dssp TTCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 789999999986
No 153
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.05 E-value=5.5e-10 Score=92.26 Aligned_cols=83 Identities=24% Similarity=0.198 Sum_probs=62.5
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHh-----c---CCC
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMY-----T---DGL 415 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiY-----t---~~~ 415 (608)
|+|+. +|++|++||.+ |+.|+||++||.+.+.+.| +....|.++++++.+++.|++|+| + +.+
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E-------~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i 75 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-------NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEI 75 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccc-------cCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCC
Confidence 45554 78999999999 9999999999986333333 345789999999999999999999 5 344
Q ss_pred C--CCCCCcccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCc
Q 007317 416 K--DIDPDQVCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (608)
Q Consensus 416 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l 460 (608)
+ +++.+ ++.+|+.||++|+.
T Consensus 76 ~~~~i~~~-------------------------~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 76 PEFPIAPE-------------------------IALELLMAANFLDC 97 (97)
T ss_dssp CCCCCCGG-------------------------GHHHHHHHHHHHTC
T ss_pred CcCcCCHH-------------------------HHHHHHHHHhhhCC
Confidence 2 13333 99999999999873
No 154
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.04 E-value=5.4e-10 Score=99.07 Aligned_cols=126 Identities=14% Similarity=0.155 Sum_probs=87.5
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|+|+. +|+.|.+|+.+ |..|.+|++||.+. + ...|.+++++..+++.|++|+|...-.+......
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~--------~-----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDL--------G-----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHT--------C-----CSSEECTTCCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhc--------C-----CCceecCCcCHHHHHHHHHHHHHhccCCCccccc
Confidence 67776 88999999998 89999999999861 1 2479999999999999999999876321111100
Q ss_pred cccchhhHhhhcCCCCC-----CCCchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHH
Q 007317 424 CCNSVTWLVALGSNLPN-----FVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLIL 489 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~ 489 (608)
.... ......++ ..-..+++.+|+.||++|++..|...|++++...+.+.|++..-.++.+
T Consensus 70 ~~~~-----~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I 135 (141)
T 1fs1_B 70 ENKE-----KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNI 135 (141)
T ss_dssp ----------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-
T ss_pred cccc-----cchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCC
Confidence 0000 00000000 0011359999999999999999999999999999977777765555443
No 155
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.02 E-value=4.2e-10 Score=95.47 Aligned_cols=64 Identities=31% Similarity=0.504 Sum_probs=61.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhhhHhhhcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 007317 14 DEIDLDASDFSSSVPLKKVPNGDVFEASRAGDVDRLRYILESGVNVNARDQWDSVALYYACLAGHLDAARML 85 (608)
Q Consensus 14 ~~~~l~~~d~~g~tpL~~~~~~~l~~A~~~g~~~~~~~Ll~~g~~in~~d~~g~tpLh~A~~~g~~~~v~~L 85 (608)
.|+++|.+|..|+||| |+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 46 ~g~~i~~~d~~g~tpL--------h~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 46 NGADVAAKDKNGSTPL--------HLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCCTTCCCTTCCCHH--------HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCCCccCCCCCCHH--------HHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 4899999999999999 999999999999999999999999999999999999999999999976
No 156
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.99 E-value=1.9e-11 Score=127.41 Aligned_cols=105 Identities=16% Similarity=0.020 Sum_probs=55.0
Q ss_pred hHhhhcCCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---CcccCCCCc-HHHHHh--h
Q 007317 38 FEASRAGDVDRLRYILESGVNV---NARDQWDSVALYYACLAGHLDAARMLLESGAIC---SEHTFDGDR-CHYAAL--N 108 (608)
Q Consensus 38 ~~A~~~g~~~~~~~Ll~~g~~i---n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~---~~~d~~g~~-~~~aa~--~ 108 (608)
|+|+..|+.+++++|+++|+.. +..+..|.||||+||..|+.+++++|+++|+++ +..+.+ .| +|+|+. +
T Consensus 97 h~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~ 175 (376)
T 2aja_A 97 FVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGH 175 (376)
T ss_dssp HHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCC
Confidence 6666666666666666666521 223334556666666666666666666666542 222222 33 455555 6
Q ss_pred HHHHHHHHhhcCCCCCCCCcccccccccccc-cccc
Q 007317 109 LKVRKLLKAYEARPPPLGPLQAALRDTFLGC-GANR 143 (608)
Q Consensus 109 ~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac-~~~~ 143 (608)
.+++++|+.+|++......+..|.||||.|+ ..++
T Consensus 176 ~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~ 211 (376)
T 2aja_A 176 LHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGH 211 (376)
T ss_dssp HHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCC
T ss_pred HHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCC
Confidence 6666666666554321002344566666666 5544
No 157
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.98 E-value=1.5e-11 Score=128.20 Aligned_cols=99 Identities=15% Similarity=0.046 Sum_probs=84.4
Q ss_pred hhhHhhhcCCHHHHHHHHHcCCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcCc--ccCCCCc-HHHHH-h-
Q 007317 36 DVFEASRAGDVDRLRYILESGVNV---NARDQWDSVALYYACLAGHLDAARMLLESGAICSE--HTFDGDR-CHYAA-L- 107 (608)
Q Consensus 36 ~l~~A~~~g~~~~~~~Ll~~g~~i---n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~--~d~~g~~-~~~aa-~- 107 (608)
.||+||..|+.+++++|+++|+++ +..+.. +||||+||..|+.+++++|+++|++++. .|..|.| +|+|+ .
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~ 209 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHC
Confidence 349999999999999999999752 222222 9999999999999999999999999887 7888887 68898 7
Q ss_pred -hHHHHHHHHhhcCCCCCCCCcccccccccccccccch
Q 007317 108 -NLKVRKLLKAYEARPPPLGPLQAALRDTFLGCGANRQ 144 (608)
Q Consensus 108 -~~~~~~~L~~~~~~~~~~~~~~~g~t~l~lac~~~~~ 144 (608)
+.+++++|+.+|. .|.||++.|+..++.
T Consensus 210 G~~eiv~~Ll~~ga---------~~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 210 GHHNVINFLLDCPV---------MLAYAEIHEFEYGEK 238 (376)
T ss_dssp CCHHHHHHHTTSHH---------HHHHHHHCTTTTTTT
T ss_pred CCHHHHHHHHhCCC---------ccchHHHHHHHCCCH
Confidence 8999999998652 388999999987774
No 158
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.96 E-value=1.9e-10 Score=104.40 Aligned_cols=134 Identities=13% Similarity=0.113 Sum_probs=69.2
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc-
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ- 422 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~- 422 (608)
|+|+. +|+.|.+|+.+ |..|++|++||.+. . ....|.+++|+..+++.|++|+|...-.+.+.+.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~---------~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDD---------C---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------------CCTTSCHHHHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHcc---------C---CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccc
Confidence 66664 79999999998 89999999999861 1 1247999999999999999999997642111000
Q ss_pred ccccchhhHhhhcCCCCC----CCC-chHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccCch
Q 007317 423 VCCNSVTWLVALGSNLPN----FVP-FDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYGVF 496 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~~~ 496 (608)
.... .......+. |.. ..+++.+|+.||++|+|..|...|++++...+.+.|++++-.++.++..+.-.
T Consensus 73 ~~~~-----~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~e 146 (160)
T 2p1m_A 73 VEGA-----ATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPE 146 (160)
T ss_dssp ---------------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHH
T ss_pred cccc-----ccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHH
Confidence 0000 000000000 111 12489999999999999999999999999999888999988888877666543
No 159
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=8.1e-10 Score=92.80 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHhccCchHHHHHHHHHHHHhHHHhhcchhHHHHHhcCCCCCCCCcccccCCCCCcccccCCCCcchHH
Q 007317 478 VSPAELCHWLILSDMYGVFKVREYCLEVIACNFETFADSREFRAMLLTLPPPSGDSSFRTTVPSAPGAIINVDQGNLLDD 557 (608)
Q Consensus 478 ~~~~n~~~~l~~A~~~~~~~L~~~c~~~I~~n~~~v~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~d~~~~~~~ 557 (608)
++++||+.++.+|+.|++..|.+.|.+||..||.++..+++|.+|+.+ .+ ..+.+++ +.+| .++| +
T Consensus 8 L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~----~L---~~lL~sd--v~~E----~~vf-~ 73 (105)
T 2eqx_A 8 VQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHR----LL---TDIISDG--VPCS----QNPT-E 73 (105)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHH----HH---HHHHHTC--EETT----SCHH-H
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHH----HH---HHHHcCC--CCCH----HHHH-H
Confidence 389999999999999999999999999999999999999999976665 32 3332333 4456 5677 9
Q ss_pred HHHHHHHHhhhh
Q 007317 558 LREKWLEAEAAE 569 (608)
Q Consensus 558 ~~~~W~~~~~~~ 569 (608)
|+++|+++++.+
T Consensus 74 av~~Wv~~d~~~ 85 (105)
T 2eqx_A 74 AIEAWINFNKEE 85 (105)
T ss_dssp HHHHHHHTTHHH
T ss_pred HHHHHHHcCHHH
Confidence 999999998753
No 160
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.77 E-value=1.9e-08 Score=83.01 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=63.0
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhccc--ccCcCcccEEEcCCCCHHHHHHHHHHHh-----c---Cccc---cCh
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFET--DWRYRNEIRFSREKLSYPALYGLIHFFY-----S---DRLE---IAV 238 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~--~~~e~~~~~i~l~~v~~~~~~~lL~ylY-----t---g~~~---i~~ 238 (608)
|+++. +|..|.+||.+ ++.|++|++||.+ .+.+.....|++++|++.+++.+++|+| + ++++ ++.
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~ 82 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 82 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH
Confidence 44554 78999999999 9999999999986 5667677889999999999999999999 5 6676 899
Q ss_pred hhHHHHHHHHhHh
Q 007317 239 DDMEDLVKICKVC 251 (608)
Q Consensus 239 ~~~~~ll~~A~~c 251 (608)
+++.+|+.+|...
T Consensus 83 ~~l~eLl~AAnyL 95 (97)
T 4ajy_C 83 EIALELLMAANFL 95 (97)
T ss_dssp GGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999999754
No 161
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.69 E-value=5.6e-08 Score=88.03 Aligned_cols=60 Identities=13% Similarity=0.169 Sum_probs=50.0
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhccc-ccC-cCcccEEEcCCCCHHHHHHHHHHHhcCc
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFET-DWR-YRNEIRFSREKLSYPALYGLIHFFYSDR 233 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~-~~~-e~~~~~i~l~~v~~~~~~~lL~ylYtg~ 233 (608)
|+++. +|..|.+|+.+ ++.|+||++||.+ ++. +.....|++++|+..++..+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~ 65 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 65 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcC
Confidence 56665 78999999999 8999999999987 666 5566789999999999999999999987
No 162
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.40 E-value=1.4e-06 Score=79.34 Aligned_cols=139 Identities=18% Similarity=0.178 Sum_probs=92.1
Q ss_pred cEEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 344 DVCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 344 Dv~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
-|+|+. +|..|.+++.+ |.+|.+++.|+...+. + +..+.....|.|++|+..+++.|+.|++...-.+.+...
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~--~---~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGD--D---DDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC----------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCc--c---cccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccc
Confidence 466665 78999999998 6899999999985110 0 001122367999999999999999999986543111100
Q ss_pred ccccchhhHhhhcCCCCC----CC-CchHHHHHHHHHhhccCchhHHHHHHHHHHhhcccCCHHHHHHHHHHHhccC
Q 007317 423 VCCNSVTWLVALGSNLPN----FV-PFDEQAEEMFDAASRYLLFPLKRAVADVLLLHLEMVSPAELCHWLILSDMYG 494 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~l~~~~~~n~~~~l~~A~~~~ 494 (608)
+... ......+. |. -..+.+.+|+.||++|+|..|..+|++.+...+.+.|++.+-.++.+...+.
T Consensus 82 ----~~~~--~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t 152 (169)
T 3v7d_A 82 ----DDDS--RKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFT 152 (169)
T ss_dssp ------------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCC
T ss_pred ----cccc--cccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 0000 00000000 00 1135899999999999999999999999998887778887777666655443
No 163
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.25 E-value=1.9e-06 Score=70.50 Aligned_cols=93 Identities=20% Similarity=0.116 Sum_probs=62.2
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|+|+. +|..|.+++.+ |..|.++++|+.+.+.+. +.....|.+++++..+++.|++|+|...-...+..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~-------e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~-- 72 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFA-------ENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSST-- 72 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCS--
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcc-------cccCCceeCCCCCHHHHHHHHHHHHHccccCCCcc--
Confidence 55665 89999999997 799999999998621222 23346899999999999999999987431000000
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCc
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l 460 (608)
..+++.-..+.+.+|+.||++|++
T Consensus 73 -------------~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 73 -------------EIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp -------------CCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred -------------cCCCcccCHHHHHHHHHHHHHhCc
Confidence 000110012399999999999875
No 164
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.22 E-value=2.7e-06 Score=70.00 Aligned_cols=93 Identities=20% Similarity=0.183 Sum_probs=65.3
Q ss_pred EEEEe-CCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 345 VCVRV-DKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 345 v~l~~-~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|+|+. +|..|.+++.+ |..|.++++|+.+ ++ +.....|.+++++..+++.|++|+|...-...+..
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~---------~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~-- 72 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEG---------PF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSE-- 72 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHS---------ST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCS--
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhc---------cc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCcc--
Confidence 67776 89999999997 8999999999986 22 22335799999999999999999997441000000
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCc
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l 460 (608)
-....+++.-..+.+.+|+.||++|++
T Consensus 73 ----------~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 73 ----------DDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp ----------SCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred ----------ccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 000011111123599999999999975
No 165
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.09 E-value=2.6e-05 Score=65.16 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=76.0
Q ss_pred cEEEEeCCeEEeehHHHHhhcc-HHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS-~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
-|+|.|+|+.|...+..|+... .+|.+||.+...+.... ....++-+ |-++..|+.||+|+.+|.+. ++.+.
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~-----d~~~~~fi-DRdp~~F~~IL~~lr~g~l~-~p~~~ 79 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDK-----DETGAYLI-DRDPTYFGPVLNYLRHGKLV-INKDL 79 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGB-----CTTSCEEE-CSCHHHHHHHHHHHHHSCCC-CCTTS
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCC-----CCCceEEe-cCChHHHHHHHHHhCCCeeC-CCCCC
Confidence 4788899999999999998765 48899998632222111 12244555 57999999999999999986 66551
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHh
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLL 473 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~ 473 (608)
....++.-|.+|+++.|++.|.+.|.+
T Consensus 80 ------------------------~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 80 ------------------------AEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp ------------------------CHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred ------------------------CHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 446788999999999999999988764
No 166
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=97.92 E-value=2.8e-05 Score=68.58 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=71.4
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCcccc-Chhh-H-H--HHHH
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEI-AVDD-M-E--DLVK 246 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i-~~~~-~-~--~ll~ 246 (608)
|++.. +|..|.+|+.+ +..|.+++.||.+.- ...|++++|+..+++.+++|+|...-.. ...+ - . .--.
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 56665 78999999998 899999999997631 3479999999999999999999865321 1000 0 0 0000
Q ss_pred HHhHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007317 247 ICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQG 289 (608)
Q Consensus 247 ~A~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~ 289 (608)
+ ..+.-+|+.---+...+++..|..++...|...|.+++...
T Consensus 79 i-~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ 120 (141)
T 1fs1_B 79 I-PVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANM 120 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred h-hHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 0 01111222111224566666777778888888888777654
No 167
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.68 E-value=6e-05 Score=63.30 Aligned_cols=94 Identities=21% Similarity=0.121 Sum_probs=62.8
Q ss_pred cEEEE-eCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 344 DVCVR-VDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 344 Dv~l~-~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
-|+|+ .+|..|.+++.+ |..|..+++|+.....+.| .....|.|++|+..+++.|++|+|...-..-...
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e-------~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~- 88 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAE-------NETNEVNFREIPSHVLSKVCMYFTYKVRYTNSST- 88 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSS-
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCccc-------ccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcC-
Confidence 46677 488999999995 6899999999985222222 2335899999999999999999986431100000
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCc
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLL 460 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l 460 (608)
..+.+.-..+.+.+|+.||++|++
T Consensus 89 --------------~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 89 --------------EIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp --------------CCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred --------------CCCCcccCHHHHHHHHHHHHHhCc
Confidence 011111123599999999999975
No 168
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.57 E-value=2.4e-05 Score=70.54 Aligned_cols=113 Identities=11% Similarity=0.066 Sum_probs=48.8
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCccccCh-hhHH-----HHH
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAV-DDME-----DLV 245 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~-~~~~-----~ll 245 (608)
|++.. +|..|.+|+.+ +..|++|+.||.+.. ....|++++|+..++..+++|+|...-...+ +.-. .-.
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 81 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDD 81 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccc
Confidence 56664 78999999998 889999999997642 2347899999999999999999997642110 0000 000
Q ss_pred HHHhHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 007317 246 KICKVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQGS 290 (608)
Q Consensus 246 ~~A~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~ 290 (608)
.+ ..+..+|+.--......++..|..++...|...|.+++....
T Consensus 82 ~i-~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~i 125 (160)
T 2p1m_A 82 DL-KAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMI 125 (160)
T ss_dssp --------------------CHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hh-hHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 00 011122333112245677778888999999999988887654
No 169
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.39 E-value=0.00046 Score=56.57 Aligned_cols=76 Identities=13% Similarity=0.156 Sum_probs=60.8
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhcccccCcCcccEEEcCCCCHHHHHHHHHHHhcCc--------------cccC
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFETDWRYRNEIRFSREKLSYPALYGLIHFFYSDR--------------LEIA 237 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~--------------~~i~ 237 (608)
|+++. +|..|.+++.+ +..|..++.|+.+++ +.....|++++|+..+++.+++|+|.-. ..++
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd 83 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIP 83 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCC
Confidence 56665 88999999997 889999999998765 4444679999999999999999999643 2456
Q ss_pred hhhHHHHHHHHhH
Q 007317 238 VDDMEDLVKICKV 250 (608)
Q Consensus 238 ~~~~~~ll~~A~~ 250 (608)
.+.+-+|+.+|..
T Consensus 84 ~~~lfeLi~AAny 96 (99)
T 1hv2_A 84 TEMSLELLLAADY 96 (99)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6667777777754
No 170
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.28 E-value=0.00053 Score=55.87 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=58.9
Q ss_pred eeEEe-cCeeeehhhhhHhccCHHHHHhccc--ccCcCcccEEEcCCCCHHHHHHHHHHHhcCc-----------cccCh
Q 007317 173 VVFYV-QGRPIEAHRVILSARSVFFRRKFET--DWRYRNEIRFSREKLSYPALYGLIHFFYSDR-----------LEIAV 238 (608)
Q Consensus 173 v~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~--~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~-----------~~i~~ 238 (608)
|+++. +|..|.+++.+ +..|.+++.|+.+ .+.+.....|++++|+..+++.+++|+|.-. ..++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 45555 78999999996 8899999999975 2245455689999999999999999999643 35677
Q ss_pred hhHHHHHHHHhHh
Q 007317 239 DDMEDLVKICKVC 251 (608)
Q Consensus 239 ~~~~~ll~~A~~c 251 (608)
+.+.+|+.+|...
T Consensus 82 ~~l~eLi~AAnyL 94 (96)
T 2fnj_C 82 EIALELLMAANFL 94 (96)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 7888888888643
No 171
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=96.97 E-value=0.0045 Score=51.39 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=59.9
Q ss_pred CeeEEecCeeeehhhhhHhccC-HHHHHhcccccC----cCcccEEEcCCCCHHHHHHHHHHHhcCccccChhh-HHHHH
Q 007317 172 DVVFYVQGRPIEAHRVILSARS-VFFRRKFETDWR----YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDD-MEDLV 245 (608)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~arS-~~F~~lf~~~~~----e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~-~~~ll 245 (608)
-|++.|||+.|...+..|.... .+|..||.+... ......+-+ +-+|..|..+|+|+.+|.+.++.+. ...++
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~ 85 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGVL 85 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHHHH
Confidence 3677899999999999998764 478888875421 112233444 6899999999999999998775542 34444
Q ss_pred HHHhHhcHHHHHHHHH
Q 007317 246 KICKVCKCESLQRIIE 261 (608)
Q Consensus 246 ~~A~~c~~~~L~~~l~ 261 (608)
+-|+.+++..|.+.+.
T Consensus 86 ~Ea~fy~l~~L~~~l~ 101 (107)
T 3drz_A 86 EEAEFYNITSLIKLVK 101 (107)
T ss_dssp HHHHHHTCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHH
Confidence 4444444444444443
No 172
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.78 E-value=0.0022 Score=59.08 Aligned_cols=100 Identities=19% Similarity=0.194 Sum_probs=74.2
Q ss_pred cEEEEeCCeEEeehHHHHhhcc-HHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS-~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
=|+|.|+|+.|...+..|.... .+|..||.+...+.... .....+-| |-++..|+.||+|+.+|.+. ++.+.
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~-----De~geyFI-DRDP~~F~~ILnyLRtG~L~-lP~~~ 85 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDK-----DETGAYLI-DRDPTYFGPVLNYLRHGKLV-INKDL 85 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----B-----CTTCCEEE-CSCSTTHHHHHHHHHHSCCC-CCTTS
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCccc-----CCCccEEe-cCChHHHHHHHHHhcCCccC-CCCCC
Confidence 3778899999999999997543 37889987622221110 12244555 46899999999999999996 76651
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHHHHHHHHHHhh
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLKRAVADVLLLH 474 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~~~c~~~l~~~ 474 (608)
....++.-|.+|+|+.|.+.|.+.|.+.
T Consensus 86 ------------------------~~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 86 ------------------------AEEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp ------------------------CHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------------------------CHHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 3467889999999999999999998754
No 173
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.25 E-value=0.01 Score=49.53 Aligned_cols=79 Identities=11% Similarity=0.088 Sum_probs=57.8
Q ss_pred CeeEEe-cCeeeehhhhhHhccCHHHHHhccc--ccCcCcccEEEcCCCCHHHHHHHHHHHhcCc-----------cccC
Q 007317 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFET--DWRYRNEIRFSREKLSYPALYGLIHFFYSDR-----------LEIA 237 (608)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~--~~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~-----------~~i~ 237 (608)
-|+++. +|..|.+++. .+..|..++.|+.. .+.+.....|++++|+..+++.+++|+|.-. ..++
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 356663 7899999999 57899999999974 2234444689999999999999999998632 3466
Q ss_pred hhhHHHHHHHHhHh
Q 007317 238 VDDMEDLVKICKVC 251 (608)
Q Consensus 238 ~~~~~~ll~~A~~c 251 (608)
.+.+.+|+.+|...
T Consensus 97 ~~~lfeLi~AAnyL 110 (112)
T 1vcb_B 97 PEIALELLMAANFL 110 (112)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 67778888777643
No 174
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=96.23 E-value=0.02 Score=51.64 Aligned_cols=117 Identities=15% Similarity=0.127 Sum_probs=68.3
Q ss_pred CeeEEe-cCeeeehhhhhHhccCHHHHHhcccccC----cCcccEEEcCCCCHHHHHHHHHHHhcCccccChhhHHHHHH
Q 007317 172 DVVFYV-QGRPIEAHRVILSARSVFFRRKFETDWR----YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVDDMEDLVK 246 (608)
Q Consensus 172 Dv~~~v-~~~~~~~Hk~iL~arS~~F~~lf~~~~~----e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~~~~~ll~ 246 (608)
-|+++. +|..|.+++.+ +..|..++.|+...-. +.....|++++|+..++..+++|+|.-.-...+..-..--.
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 456665 78999999997 7789999999974322 12236799999999999999999997543210000000000
Q ss_pred HH---hHhcHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 007317 247 IC---KVCKCESLQRIIEKELIHQKYAEYKALRDVDNSQKRFILQG 289 (608)
Q Consensus 247 ~A---~~c~~~~L~~~l~~~l~~~~~A~~~~~~~L~~~~~~~i~~~ 289 (608)
.. ..+.-.|+.---...++++..|..++.+.|...|.+.+...
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ 132 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEM 132 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 00 00001122111123455666777777777777777776543
No 175
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=93.33 E-value=0.18 Score=42.70 Aligned_cols=96 Identities=11% Similarity=0.070 Sum_probs=65.2
Q ss_pred cEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
=|+|.|||+.|..-+..|...- .+||.....+. ........+-|. =++..|+.||+|+.+|.+. ++.+.
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~-----~~~~~~g~~FiD-Rdp~~F~~ILnflR~G~l~-~p~~~- 82 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEF-----FFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLH-YPRYE- 82 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGG-----TBCSSSCSEEEC-SCHHHHHHHHHHHHHSCBC-CCTTS-
T ss_pred EEEEEeCCEEEEEeHHHHhcCC---CceecccCCcc-----cccCCCCcEEEc-CChHHHHHHHHHHhcCCCC-CCCCc-
Confidence 4888899999999999996532 23443211111 011233455554 5999999999999999985 66551
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHH--HHHHHHHHh
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLK--RAVADVLLL 473 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~--~~c~~~l~~ 473 (608)
.+..++.-|++|+|+.+. ..|.....+
T Consensus 83 -----------------------~~~~l~~Ea~fy~i~~l~l~~cC~~~~~~ 111 (124)
T 1s1g_A 83 -----------------------CISAYDDELAFYGILPEIIGDCCYEEYKD 111 (124)
T ss_dssp -----------------------CHHHHHHHHHHTTCCGGGBCHHHHHHHHH
T ss_pred -----------------------CHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 567889999999999873 445544443
No 176
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.27 E-value=0.059 Score=45.10 Aligned_cols=86 Identities=13% Similarity=0.060 Sum_probs=61.7
Q ss_pred EEEEeCCeEEeehHHHHhhccH-HHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCcc
Q 007317 345 VCVRVDKKIFRCHQVVLASRSE-YFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQV 423 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLaarS~-yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~ 423 (608)
|+|-|||+.|...+..|..... .+.+|+.+...+. ....++-+. =++..|+.||+|+.+|++. ++.+.
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~--------~~~g~~FiD-Rdp~~F~~ILnylR~G~l~-~p~~~- 75 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYD--------PVLNEYFFD-RHPGVFAQIINYYRSGKLH-YPTDV- 75 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEE--------TTTTEEEEC-SCTTTHHHHHHHHHHSCBC-CCSSS-
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCC--------CCCCcEEEe-cChHHHHHHHHHhcCCCCC-CCCcc-
Confidence 7888999999999999975532 3445554311111 123455554 6899999999999999985 66651
Q ss_pred cccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHH
Q 007317 424 CCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLK 464 (608)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~ 464 (608)
.+..++.-|.+|+|+...
T Consensus 76 -----------------------~~~~~~~Ea~fy~i~~~~ 93 (115)
T 3kvt_A 76 -----------------------CGPLFEEELEFWGLDSNQ 93 (115)
T ss_dssp -----------------------CHHHHHHHHHHHTCCGGG
T ss_pred -----------------------cHHHHHHHHHHhCCChHH
Confidence 457888999999998854
No 177
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=93.14 E-value=0.24 Score=45.45 Aligned_cols=66 Identities=17% Similarity=0.146 Sum_probs=48.2
Q ss_pred eeEEecCeeeehhhhhHhccC-HHHHHhccccc--C--cCcccEEEcCCCCHHHHHHHHHHHhcCccccChh
Q 007317 173 VVFYVQGRPIEAHRVILSARS-VFFRRKFETDW--R--YRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD 239 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~arS-~~F~~lf~~~~--~--e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~ 239 (608)
|.+.|||..|...+..|.... .+|..||.+.. . ......+-+ +-+|..|..+|+|+-+|.+.++.+
T Consensus 14 V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~ 84 (202)
T 3drx_A 14 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD 84 (202)
T ss_dssp EEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT
T ss_pred EEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC
Confidence 567799999999999997653 37888886532 1 111223444 678999999999999999977654
No 178
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=92.51 E-value=0.16 Score=41.34 Aligned_cols=86 Identities=12% Similarity=0.093 Sum_probs=59.3
Q ss_pred EEEEeCCeEEeehHHHHhhcc-HHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc-CCCCCCCCCc
Q 007317 345 VCVRVDKKIFRCHQVVLASRS-EYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDPDQ 422 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLaarS-~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt-~~~~~~~~~~ 422 (608)
|+|.|+|+.|...+..|+..- ..+.+|+.....+. ....++-+ |=++..|+.||+|+.+ |++. ++.+.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~--------~~~~eyFi-DRdp~~F~~ILnflR~~G~l~-~p~~~ 72 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYD--------PLRNEYFF-DRNRPSFDAILYFYQSGGRLR-RPVNV 72 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEE--------TTTTEEEE-CSCSTTHHHHHHHHHTTSCCC-CCTTS
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccC--------CCceeEEE-cCChHHHHHHHHHHhcCCccc-CCCCC
Confidence 778899999999999995431 12333333211111 12345555 4589999999999998 8885 66551
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHH
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLK 464 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~ 464 (608)
.+..++.-|.+|+|+.+.
T Consensus 73 ------------------------~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 73 ------------------------PLDVFSEEIKFYELGENA 90 (100)
T ss_dssp ------------------------CHHHHHHHHHHTTCCHHH
T ss_pred ------------------------CHHHHHHHHHHcCCCHHH
Confidence 567788999999998754
No 179
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.80 E-value=0.097 Score=43.04 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC-C-CCCCCcc
Q 007317 261 EKELIHQKYAEYKALRDVDNSQKRFILQGSA-L-PEEDRLP 299 (608)
Q Consensus 261 ~~~l~~~~~A~~~~~~~L~~~~~~~i~~~~~-~-~~~~~l~ 299 (608)
+||+.++.+|+.|+++.|.+.|.+|+.+||. + ..++|+.
T Consensus 11 ~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~ 51 (105)
T 2eqx_A 11 GNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLH 51 (105)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhh
Confidence 3799999999999999999999999999996 3 4444433
No 180
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=90.69 E-value=0.28 Score=42.45 Aligned_cols=87 Identities=13% Similarity=0.113 Sum_probs=61.2
Q ss_pred CcEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCc
Q 007317 343 ADVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQ 422 (608)
Q Consensus 343 ~Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~ 422 (608)
.=|+|.|+|+.|...+..|...- ..||.....+. .......++-|+ =++..|+.||+|+.+|.+. ++.+.
T Consensus 35 ~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~-----~~~~~~g~yFiD-Rdp~~F~~ILnflR~G~l~-~p~~~ 104 (140)
T 2nz0_B 35 ELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEF-----FFNEDTKEYFFD-RDPEVFRCVLNFYRTGKLH-YPRYE 104 (140)
T ss_dssp CEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGG-----SEETTTTEEEEC-SCHHHHHHHHHHHHHSSBC-CCTTS
T ss_pred CEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcc-----cccCCCCeEEEe-CCcHHHHHHHHHHhcCCcC-CCCCc
Confidence 34888899999999999996532 23443311110 011223455554 5999999999999999985 66551
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhH
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPL 463 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L 463 (608)
.+..++.-|++|+|+.+
T Consensus 105 ------------------------~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 105 ------------------------CISAYDDELAFYGILPE 121 (140)
T ss_dssp ------------------------CHHHHHHHHHHHTCCGG
T ss_pred ------------------------CHHHHHHHHHHcCCChH
Confidence 56788999999999987
No 181
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=89.90 E-value=0.25 Score=40.55 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=58.9
Q ss_pred EEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhcCCCCCCCCCccc
Q 007317 345 VCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYTDGLKDIDPDQVC 424 (608)
Q Consensus 345 v~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt~~~~~~~~~~~~ 424 (608)
|+|-|+|+.|...+..|..... +||.....+.- .......+-+. =++..|+.||+|+.+|.+. ++.+.
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~-----~~~~~~~~FiD-Rdp~~F~~ILnflR~g~l~-~p~~~-- 69 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFF-----YHPETQQYFFD-RDPDIFRHILNFYRTGKLH-YPRHE-- 69 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGG-----EEGGGTEEEEC-SCTTTHHHHHHHHHHSCBC-CCTTS--
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCccc-----ccCCCCcEEEe-CCcHHHHHHHHHHhcCCCC-CCCCc--
Confidence 7889999999999999965422 23432101100 00122445554 5899999999999999985 66551
Q ss_pred ccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhH
Q 007317 425 CNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPL 463 (608)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L 463 (608)
.+..++.-|++|+|+.+
T Consensus 70 ----------------------~~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 70 ----------------------CISAYDEELAFFGLIPE 86 (105)
T ss_dssp ----------------------CHHHHHHHHHHHTCCSC
T ss_pred ----------------------CHHHHHHHHHHcCCCHH
Confidence 46788999999999986
No 182
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=83.88 E-value=0.77 Score=38.23 Aligned_cols=77 Identities=14% Similarity=0.040 Sum_probs=50.7
Q ss_pred CeeEEecCeeeehhhhhHhccC-HHHHHhccccc-CcCcccEEEcCCCCHHHHHHHHHHHhcCccccChh-hHHHHHHHH
Q 007317 172 DVVFYVQGRPIEAHRVILSARS-VFFRRKFETDW-RYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVKIC 248 (608)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~arS-~~F~~lf~~~~-~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~~A 248 (608)
=|++.|||+.|...+..|...- ..|..|+.+.. .......+-+ +=+|..|..+|+|+-+|++.++.+ .+..+++-|
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea 84 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEEL 84 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHH
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHHH
Confidence 3678899999999999997553 24555554321 1112334444 578999999999999999877654 234444444
Q ss_pred h
Q 007317 249 K 249 (608)
Q Consensus 249 ~ 249 (608)
+
T Consensus 85 ~ 85 (115)
T 3kvt_A 85 E 85 (115)
T ss_dssp H
T ss_pred H
Confidence 3
No 183
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=77.36 E-value=2.3 Score=35.83 Aligned_cols=78 Identities=10% Similarity=0.111 Sum_probs=50.1
Q ss_pred CeeEEecCeeeehhhhhHhccCHHHHHhccc--c--cCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChh-hHHHHHH
Q 007317 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFET--D--WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVK 246 (608)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~--~--~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~ 246 (608)
-|++.|||+.|...+..|...-. .+|.. . ........+-+ +=+|..|..+|+|+-+|.+.++.+ .+..+++
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~ 89 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 89 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHH
Confidence 46778999999999999865422 12221 0 01112223434 569999999999999999876654 3555555
Q ss_pred HHhHhcH
Q 007317 247 ICKVCKC 253 (608)
Q Consensus 247 ~A~~c~~ 253 (608)
-|+.+++
T Consensus 90 Ea~fy~i 96 (124)
T 1s1g_A 90 ELAFYGI 96 (124)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 5555443
No 184
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=76.61 E-value=3.8 Score=35.29 Aligned_cols=76 Identities=11% Similarity=0.121 Sum_probs=48.8
Q ss_pred CeeEEecCeeeehhhhhHhccCHHHHHhcccc----cCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChh-hHHHHHH
Q 007317 172 DVVFYVQGRPIEAHRVILSARSVFFRRKFETD----WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVK 246 (608)
Q Consensus 172 Dv~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~----~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~ 246 (608)
-|++.|||+.|...+..|...-. .+|... ........+-+ +=++..|..+|+|+-+|.+.++.+ .+..+.+
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~e 111 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAYDD 111 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHH
T ss_pred EEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHH
Confidence 46778999999999999875422 122211 01112334444 569999999999999999876554 2444444
Q ss_pred HHhHh
Q 007317 247 ICKVC 251 (608)
Q Consensus 247 ~A~~c 251 (608)
-|+.+
T Consensus 112 Ea~fy 116 (140)
T 2nz0_B 112 ELAFY 116 (140)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44443
No 185
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=75.63 E-value=3.3 Score=33.66 Aligned_cols=75 Identities=8% Similarity=0.109 Sum_probs=48.3
Q ss_pred eeEEecCeeeehhhhhHhccCHHHHHhcccc----cCcCcccEEEcCCCCHHHHHHHHHHHhcCccccChh-hHHHHHHH
Q 007317 173 VVFYVQGRPIEAHRVILSARSVFFRRKFETD----WRYRNEIRFSREKLSYPALYGLIHFFYSDRLEIAVD-DMEDLVKI 247 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~arS~~F~~lf~~~----~~e~~~~~i~l~~v~~~~~~~lL~ylYtg~~~i~~~-~~~~ll~~ 247 (608)
|++.|||+.|...+..|..... .++... ........+-+ +=+|..|..+|+|+-+|.+.++.+ .+..+.+-
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~E 77 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYDEE 77 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHH
Confidence 6788999999999999865422 122210 01112234444 569999999999999999876554 34555555
Q ss_pred HhHh
Q 007317 248 CKVC 251 (608)
Q Consensus 248 A~~c 251 (608)
|+.+
T Consensus 78 a~fy 81 (105)
T 1nn7_A 78 LAFF 81 (105)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 5444
No 186
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=73.75 E-value=3.2 Score=33.43 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=48.4
Q ss_pred eeEEecCeeeehhhhhHhccC-HHHHHhcccc-cCcCcccEEEcCCCCHHHHHHHHHHHhc-CccccChh-hHHHHHHHH
Q 007317 173 VVFYVQGRPIEAHRVILSARS-VFFRRKFETD-WRYRNEIRFSREKLSYPALYGLIHFFYS-DRLEIAVD-DMEDLVKIC 248 (608)
Q Consensus 173 v~~~v~~~~~~~Hk~iL~arS-~~F~~lf~~~-~~e~~~~~i~l~~v~~~~~~~lL~ylYt-g~~~i~~~-~~~~ll~~A 248 (608)
|++.|||+.|...+..|...- ..+.+|+... ........+-+ +=+|..|..+|+|+-+ |++.++.+ .+..+.+-|
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea 81 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEI 81 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHH
Confidence 678899999999999986432 1233333211 11112334444 5689999999999999 88866544 234444444
Q ss_pred hHh
Q 007317 249 KVC 251 (608)
Q Consensus 249 ~~c 251 (608)
+.+
T Consensus 82 ~fy 84 (100)
T 1t1d_A 82 KFY 84 (100)
T ss_dssp HHT
T ss_pred HHc
Confidence 444
No 187
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=49.47 E-value=19 Score=38.24 Aligned_cols=88 Identities=13% Similarity=0.041 Sum_probs=57.0
Q ss_pred cEEEEeCCeEEeehHHHHhhccHHHHHHHccccccccCCCCCCCCCCCceecCCCCHHHHHHHHHHHhc-CCCCCCCCCc
Q 007317 344 DVCVRVDKKIFRCHQVVLASRSEYFKARLSRMKDFYEGKEGLPGDILPCIEEHDLSKETFEKMIEYMYT-DGLKDIDPDQ 422 (608)
Q Consensus 344 Dv~l~~~~~~~~~Hr~iLaarS~yF~~~~~~~~~~~e~~~~~~~~~~~~i~l~~~~~~~~~~ll~yiYt-~~~~~~~~~~ 422 (608)
=|+|-|||+.|...+..|... =.+++.. ..... ........++-+ |=++..|+.||+|+.+ |++. .+.+.
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~---p~s~l~~--~~~~~--~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~-~p~~~ 123 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQF---PETLLGD--PKKRM--RYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLR-RPVNV 123 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTS---TTSTTTC--HHHHG--GGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCC-CCTTS
T ss_pred EEEEEeCCEEEEecHHHHhcC---CCCcccc--cccCC--cccCCCCCCEEE-cCChHHHHHHHHHHhcCCccc-cCCcc
Confidence 377789999999999998542 1222221 00000 000112245555 4589999999999999 8885 65551
Q ss_pred ccccchhhHhhhcCCCCCCCCchHHHHHHHHHhhccCchhHH
Q 007317 423 VCCNSVTWLVALGSNLPNFVPFDEQAEEMFDAASRYLLFPLK 464 (608)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~l~l~~L~ 464 (608)
....+.+-|++|+++.+.
T Consensus 124 ------------------------~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 124 ------------------------PLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp ------------------------CHHHHHHHHHHTTCCHHH
T ss_pred ------------------------cHHHHHHHHHhcCCCHHH
Confidence 445678889999998754
No 188
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=33.64 E-value=43 Score=18.57 Aligned_cols=22 Identities=14% Similarity=0.309 Sum_probs=17.9
Q ss_pred HHHHHHHhccCchHHHHHHHHH
Q 007317 484 CHWLILSDMYGVFKVREYCLEV 505 (608)
Q Consensus 484 ~~~l~~A~~~~~~~L~~~c~~~ 505 (608)
+.++-+|.++..++|..+|+.-
T Consensus 2 ckvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 2 CKVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHHBCCCCHHHHHHHHHH
T ss_pred ceEEeehhhcCCHHHHHHHHhc
Confidence 3567789999999999999764
Done!