Query 007319
Match_columns 608
No_of_seqs 358 out of 3245
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 22:47:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007319.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007319hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vsq_A Surfactin synthetase su 100.0 2E-71 6.8E-76 662.4 20.0 532 14-608 302-860 (1304)
2 1ry2_A Acetyl-coenzyme A synth 100.0 5.9E-65 2E-69 566.3 47.0 475 114-608 19-525 (663)
3 1pg4_A Acetyl-COA synthetase; 100.0 1.3E-64 4.5E-69 563.3 45.0 468 120-608 23-516 (652)
4 4dg8_A PA1221; ANL superfamily 100.0 4.2E-60 1.4E-64 522.9 35.5 371 185-608 36-418 (620)
5 3etc_A AMP-binding protein; ad 100.0 2.6E-59 9E-64 513.6 39.3 412 166-608 48-474 (580)
6 3g7s_A Long-chain-fatty-acid-- 100.0 3.6E-59 1.2E-63 510.5 38.0 395 186-608 29-438 (549)
7 3ni2_A 4-coumarate:COA ligase; 100.0 9.1E-59 3.1E-63 505.8 38.0 388 185-608 31-433 (536)
8 4gr5_A Non-ribosomal peptide s 100.0 2.4E-58 8.4E-63 506.0 34.3 373 186-608 85-468 (570)
9 1amu_A GRSA, gramicidin synthe 100.0 8.6E-58 2.9E-62 500.1 36.8 370 186-608 49-429 (563)
10 4fuq_A Malonyl COA synthetase; 100.0 1.9E-57 6.4E-62 491.4 39.0 379 187-608 11-398 (503)
11 3o83_A Peptide arylation enzym 100.0 5.2E-58 1.8E-62 500.5 33.8 390 186-608 40-438 (544)
12 1mdb_A 2,3-dihydroxybenzoate-A 100.0 3.2E-58 1.1E-62 501.7 31.9 386 186-608 35-429 (539)
13 3e7w_A D-alanine--poly(phospho 100.0 2.5E-57 8.4E-62 491.8 36.9 375 186-608 11-397 (511)
14 3tsy_A Fusion protein 4-coumar 100.0 3.5E-57 1.2E-61 526.8 40.0 452 122-608 14-480 (979)
15 3rg2_A Enterobactin synthase c 100.0 6.8E-57 2.3E-61 498.9 39.7 384 190-608 39-433 (617)
16 1v25_A Long-chain-fatty-acid-C 100.0 3.7E-57 1.3E-61 493.5 36.7 387 186-608 28-434 (541)
17 3r44_A Fatty acyl COA syntheta 100.0 7.7E-58 2.6E-62 496.1 31.1 379 186-608 26-412 (517)
18 3fce_A D-alanine--poly(phospho 100.0 9.1E-58 3.1E-62 495.5 31.5 377 186-608 11-398 (512)
19 3rix_A Luciferase, luciferin 4 100.0 1.4E-57 4.9E-62 498.0 33.0 394 187-608 31-438 (550)
20 3c5e_A Acyl-coenzyme A synthet 100.0 1.4E-56 4.6E-61 491.4 40.6 408 164-608 28-455 (570)
21 3t5a_A Long-chain-fatty-acid-- 100.0 1.2E-57 4.2E-62 491.0 28.2 384 186-607 34-480 (480)
22 2d1s_A Luciferase, luciferin 4 100.0 1.3E-56 4.3E-61 489.8 36.6 387 187-608 37-440 (548)
23 2v7b_A Benzoate-coenzyme A lig 100.0 2E-56 6.8E-61 486.9 37.5 396 173-608 23-428 (529)
24 3ivr_A Putative long-chain-fat 100.0 1E-56 3.6E-61 486.8 35.1 377 186-608 16-397 (509)
25 3l8c_A D-alanine--poly(phospho 100.0 6.9E-57 2.4E-61 489.8 33.0 376 186-608 14-402 (521)
26 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.1E-55 3.9E-60 477.9 37.7 374 186-608 12-401 (504)
27 3kxw_A Saframycin MX1 syntheta 100.0 1.2E-54 4.1E-59 479.7 32.3 385 186-608 21-457 (590)
28 3ite_A SIDN siderophore synthe 100.0 1.6E-54 5.5E-59 475.5 32.7 380 186-608 30-426 (562)
29 3nyq_A Malonyl-COA ligase; A/B 100.0 1.1E-54 3.8E-59 469.7 29.3 361 186-608 32-404 (505)
30 3ipl_A 2-succinylbenzoate--COA 100.0 8.1E-54 2.8E-58 463.4 31.6 383 185-608 10-397 (501)
31 3gqw_A Fatty acid AMP ligase; 100.0 2.3E-52 7.9E-57 460.2 34.2 377 186-608 31-460 (576)
32 4gs5_A Acyl-COA synthetase (AM 100.0 1.7E-33 5.8E-38 289.7 16.0 211 355-608 36-249 (358)
33 2y4o_A Phenylacetate-coenzyme 100.0 4.3E-32 1.5E-36 288.4 17.5 230 352-608 88-334 (443)
34 3qov_A Phenylacetate-coenzyme 100.0 1E-31 3.4E-36 284.9 19.2 230 352-608 81-330 (436)
35 2y27_A Phenylacetate-coenzyme 100.0 8.9E-31 3E-35 277.7 19.3 230 352-608 86-332 (437)
36 3hgu_A EHPF; phenazine, antibi 100.0 3.6E-30 1.2E-34 266.8 15.4 196 353-558 88-318 (369)
37 2jgp_A Tyrocidine synthetase 3 98.6 1.1E-09 3.9E-14 118.0 -5.8 128 13-148 374-511 (520)
38 1l5a_A Amide synthase, VIBH; n 98.1 5.7E-08 1.9E-12 102.1 -7.3 130 13-154 278-418 (436)
39 4hvm_A Tlmii; PSI-biology, mid 98.1 1E-07 3.5E-12 102.0 -5.7 130 13-152 299-466 (493)
40 2xhg_A Tyrocidine synthetase A 96.8 3.4E-05 1.2E-09 81.4 -6.0 123 13-144 309-454 (466)
41 4eql_A 4-substituted benzoates 95.7 0.035 1.2E-06 59.1 9.9 30 353-382 90-120 (581)
42 4b2g_A GH3-1 auxin conjugating 94.8 0.12 3.9E-06 55.3 10.5 31 353-383 96-127 (609)
43 4epl_A Jasmonic acid-amido syn 94.4 0.21 7.3E-06 53.0 11.3 31 353-383 95-126 (581)
44 1q9j_A PAPA5, polyketide synth 89.7 0.025 8.7E-07 58.2 -3.0 104 23-144 297-414 (422)
45 2y27_A Phenylacetate-coenzyme 84.1 4.9 0.00017 41.1 10.7 101 189-290 88-192 (437)
46 2y4o_A Phenylacetate-coenzyme 83.1 5.6 0.00019 40.7 10.6 81 209-290 111-194 (443)
47 3qov_A Phenylacetate-coenzyme 82.2 6 0.0002 40.4 10.4 99 191-290 86-188 (436)
48 3rix_A Luciferase, luciferin 4 77.0 7.1 0.00024 41.3 9.2 99 356-459 35-136 (550)
49 3g7s_A Long-chain-fatty-acid-- 74.7 18 0.00062 38.1 11.7 103 354-459 32-138 (549)
50 1v25_A Long-chain-fatty-acid-C 73.0 22 0.00074 37.4 11.7 100 354-459 31-133 (541)
51 3ivr_A Putative long-chain-fat 72.6 13 0.00043 38.8 9.7 95 354-458 19-116 (509)
52 3c5e_A Acyl-coenzyme A synthet 71.7 25 0.00085 37.3 11.8 101 354-459 56-160 (570)
53 3ni2_A 4-coumarate:COA ligase; 70.8 16 0.00053 38.5 9.9 97 354-458 35-134 (536)
54 1t5h_X 4-chlorobenzoyl COA lig 69.3 28 0.00094 36.1 11.4 98 354-459 15-117 (504)
55 3t5a_A Long-chain-fatty-acid-- 66.7 36 0.0012 34.8 11.6 104 354-461 37-148 (480)
56 1pg4_A Acetyl-COA synthetase; 66.5 28 0.00097 37.5 11.1 96 354-453 89-187 (652)
57 3r44_A Fatty acyl COA syntheta 65.9 35 0.0012 35.5 11.4 95 354-456 29-126 (517)
58 1amu_A GRSA, gramicidin synthe 65.4 28 0.00097 36.8 10.6 96 354-459 52-150 (563)
59 3etc_A AMP-binding protein; ad 64.6 31 0.0011 36.6 10.8 95 354-453 69-166 (580)
60 1ry2_A Acetyl-coenzyme A synth 64.0 33 0.0011 37.1 11.0 97 354-454 95-195 (663)
61 4fuq_A Malonyl COA synthetase; 62.0 27 0.00091 36.3 9.5 80 375-455 28-110 (503)
62 3kxw_A Saframycin MX1 syntheta 59.6 68 0.0023 33.8 12.4 101 354-460 24-130 (590)
63 2v7b_A Benzoate-coenzyme A lig 59.1 33 0.0011 35.8 9.7 95 354-458 36-133 (529)
64 4gr5_A Non-ribosomal peptide s 58.6 42 0.0014 35.4 10.5 92 354-455 88-182 (570)
65 3o83_A Peptide arylation enzym 58.2 41 0.0014 35.2 10.3 90 354-453 43-135 (544)
66 3hgu_A EHPF; phenazine, antibi 58.0 25 0.00086 34.6 8.1 98 189-289 89-214 (369)
67 2d1s_A Luciferase, luciferin 4 57.5 35 0.0012 35.9 9.5 84 374-458 51-137 (548)
68 1mdb_A 2,3-dihydroxybenzoate-A 52.8 50 0.0017 34.6 9.7 90 354-453 38-130 (539)
69 3tsy_A Fusion protein 4-coumar 50.0 50 0.0017 37.6 9.8 95 354-456 74-171 (979)
70 3ipl_A 2-succinylbenzoate--COA 49.7 44 0.0015 34.5 8.7 78 375-453 26-103 (501)
71 3fce_A D-alanine--poly(phospho 46.9 59 0.002 33.6 9.1 89 354-452 14-105 (512)
72 3vc3_A Beta-cyanoalnine syntha 46.0 61 0.0021 31.7 8.5 93 189-288 48-141 (344)
73 3ezx_A MMCP 1, monomethylamine 45.1 1.7E+02 0.0059 26.2 11.3 89 398-489 93-193 (215)
74 3ite_A SIDN siderophore synthe 41.0 1.5E+02 0.005 31.0 11.2 97 354-453 33-134 (562)
75 4dg8_A PA1221; ANL superfamily 39.6 1E+02 0.0035 32.9 9.7 89 354-452 40-131 (620)
76 3tbh_A O-acetyl serine sulfhyd 38.9 1.3E+02 0.0044 29.2 9.5 92 191-289 35-127 (334)
77 3gqw_A Fatty acid AMP ligase; 37.3 1.2E+02 0.0041 31.6 9.9 86 373-459 47-142 (576)
78 3l8c_A D-alanine--poly(phospho 37.1 68 0.0023 33.2 7.7 79 374-453 28-109 (521)
79 4h1h_A LMO1638 protein; MCCF-l 36.9 1.1E+02 0.0037 29.7 8.5 69 230-298 9-96 (327)
80 3rg2_A Enterobactin synthase c 35.9 1.1E+02 0.0037 32.6 9.2 89 355-453 39-130 (617)
81 3e7w_A D-alanine--poly(phospho 34.9 1.1E+02 0.0037 31.6 8.8 89 354-452 14-106 (511)
82 4e5s_A MCCFLIKE protein (BA_56 29.6 1.6E+02 0.0054 28.5 8.3 69 230-299 9-97 (331)
83 3tla_A MCCF; serine protease, 29.6 1.6E+02 0.0054 29.1 8.4 70 230-299 40-128 (371)
84 3ri6_A O-acetylhomoserine sulf 28.8 2.3E+02 0.0079 28.4 9.8 57 230-288 118-175 (430)
85 3sr3_A Microcin immunity prote 27.1 1.5E+02 0.005 28.8 7.6 69 230-299 10-98 (336)
86 3dzz_A Putative pyridoxal 5'-p 25.2 2.3E+02 0.0079 27.4 9.0 56 230-288 106-168 (391)
87 3ju7_A Putative PLP-dependent 25.1 1.8E+02 0.0061 28.5 8.1 62 223-287 67-136 (377)
88 3nyq_A Malonyl-COA ligase; A/B 24.2 1.4E+02 0.0046 30.8 7.2 78 374-454 47-124 (505)
89 3kki_A CAI-1 autoinducer synth 23.9 2.2E+02 0.0076 27.9 8.7 73 230-307 140-212 (409)
90 1eg5_A Aminotransferase; PLP-d 23.9 2.8E+02 0.0096 26.6 9.3 58 230-288 86-147 (384)
91 2e7j_A SEP-tRNA:Cys-tRNA synth 22.7 4.1E+02 0.014 25.2 10.3 56 230-288 90-155 (371)
92 3a2b_A Serine palmitoyltransfe 22.6 3.9E+02 0.013 25.8 10.2 56 230-289 124-182 (398)
93 1z7w_A Cysteine synthase; tran 22.6 3.6E+02 0.012 25.7 9.5 67 222-288 54-121 (322)
94 4aec_A Cysteine synthase, mito 21.9 3.4E+02 0.012 27.3 9.3 93 189-288 136-229 (430)
95 4hvk_A Probable cysteine desul 21.2 2.6E+02 0.0088 26.8 8.4 58 230-288 85-146 (382)
96 3zrp_A Serine-pyruvate aminotr 20.7 3.4E+02 0.012 25.9 9.2 58 230-288 74-135 (384)
No 1
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2e-71 Score=662.40 Aligned_cols=532 Identities=15% Similarity=0.108 Sum_probs=414.4
Q ss_pred HhcCCCchhhHHHHHHHHHHhhhcCCC-chhHHHHHHHHHHhcCCCCCCCchhhhhhhhhccccccCCCC---------C
Q 007319 14 MKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP---------P 83 (608)
Q Consensus 14 ~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~~plfq~~~~~~~~~~~~---------~ 83 (608)
+|+|++++++.+|.++|++++++..++ +||++||++ |++.++ + + |+||+||++++.+... .
T Consensus 302 lplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~l~--~----~--~lf~~~~~~~~~~~~~~~~~~~~~~g 372 (1304)
T 2vsq_A 302 VPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQAD--Q----P--KLIDHIIVFENYPLQDAKNEESSENG 372 (1304)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHSSS--C----S--SSCCCEEEECSSCHHHHSCCCHHHHS
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHHhC--C----C--cccceeEEEeecccccccccccccCC
Confidence 578999999999999999999998877 999999999 999874 2 2 5699999998754211 0
Q ss_pred ccccC-CcchhcccchHHHHHHhCCcccccc-cCCCccchHHHHHhhhhChHHHHHHHHhhccceeecccccc--ccCCC
Q 007319 84 LYWFP-SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTD 159 (608)
Q Consensus 84 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~ 159 (608)
+...+ ......+|||.+.+. .++++...+ |+. ++|...+++++.++|.++++++...++.+...+ +...+
T Consensus 373 ~~~~~~~~~~~~~~dL~l~~~-~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~~~e 446 (1304)
T 2vsq_A 373 FDMVDVHVFEKSNYDLNLMAS-PGDEMLIKLAYNE-----NVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVDDRE 446 (1304)
T ss_dssp EEEEEEEECCCCCSSEEEEEE-CSSSCEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHSTTSBGGGCCCCCHHH
T ss_pred ceeEeeecccccccCeEEEEe-cCCcEEEEEEECC-----ccCCHHHHHHHHHHHHHHHHHhccCccccccccCCCCHHH
Confidence 00000 011356788887653 355677777 877 999999999999999999999876555554432 22211
Q ss_pred CCCCCCcccCCCchhHhhhcccc--cccCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEE
Q 007319 160 KSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAI 236 (608)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~--~~~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V 236 (608)
.......|+....... ..++.. ..+++++||++|+++.+. ++||+||+++++++|++|++. +++|++|
T Consensus 447 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V 517 (1304)
T 2vsq_A 447 REFLLTGLNPPAQAHE-TKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKGSVV 517 (1304)
T ss_dssp HHHHHTTTSCCCCCCC-CCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEE
T ss_pred HHHHHHhcCCCCCCCC-CCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCcCEE
Confidence 1111233443322111 111211 225588999999998777 999999999999999999999 9999999
Q ss_pred EEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-cEEEEe
Q 007319 237 AIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLP 315 (608)
Q Consensus 237 ai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 315 (608)
+|+++|++++++++|||+|+|+++|||||.+|.+++.+++++++++++|++....... ...+. ...++.
T Consensus 518 ~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~----------~~~~~~~~~~~~ 587 (1304)
T 2vsq_A 518 ALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQA----------AELPYTGTTLFI 587 (1304)
T ss_dssp EECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTS----------TTCCCCSEEEES
T ss_pred EEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhh----------hccCCCCcEEEe
Confidence 9999999999999999999999999999999999999999999999999987532110 01111 111111
Q ss_pred cCCCCCCCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCC
Q 007319 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (608)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~ 395 (608)
. . ........ ........++++|||+|||||||+||||+++|+++.+. .+....++++
T Consensus 588 ~-~-------------~~~~~~~~-------~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~ 645 (1304)
T 2vsq_A 588 D-D-------------QTRFEEQA-------SDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFS 645 (1304)
T ss_dssp S-C-------------GGGGGSCS-------SCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCC
T ss_pred c-c-------------cccccccc-------CCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCC
Confidence 0 0 00011100 11123456799999999999999999999999999876 5555678899
Q ss_pred CCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC--CCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccc
Q 007319 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (608)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~--~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~L 473 (608)
++|++++.+|++|+.+.++++.+|+.|+++++.+. ..++..+.+.|++++||++.++|++++.|.+.. ...+++|
T Consensus 646 ~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~---~~~~~~l 722 (1304)
T 2vsq_A 646 DQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG---EDWMKGL 722 (1304)
T ss_dssp TTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---SHHHHTC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---hhcCCCc
Confidence 99999999999999999999999999999999874 357889999999999999999999999998653 2236789
Q ss_pred cEEEeecCCCChhhhHHHHhhccCCceeccccccccccccccCCCC---CCCccCccCcCCCCcEEEEECCCCCcCCCCC
Q 007319 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGVPYPDDQ 550 (608)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~ 550 (608)
|.+++|||++++++.+++.+.+++.+++|.||+||+++.++..... ......++|+|++|++++|+|++++++|.|+
T Consensus 723 r~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~ 802 (1304)
T 2vsq_A 723 RCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPFGA 802 (1304)
T ss_dssp SEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCTTC
T ss_pred cEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCCCC
Confidence 9999999999999988888777767899999999998755443221 2234578999999999999999999999999
Q ss_pred CceeeEEE-ecccCCCcccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 551 PCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 551 ~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+ |||+| |++...| |+.++++|+++|..+|+.+|++||||| ++++||+|+|+||+
T Consensus 803 ~--GEl~i~G~~v~~G--Y~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~ 860 (1304)
T 2vsq_A 803 V--GELCISGMGVSKG--YVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRI 860 (1304)
T ss_dssp C--EEEEEEETTCCCC--BTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEG
T ss_pred c--eEEEEeccccCcc--ccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCC
Confidence 5 99999 6655543 233778999999999988899999999 99999999999995
No 2
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=5.9e-65 Score=566.32 Aligned_cols=475 Identities=22% Similarity=0.332 Sum_probs=374.9
Q ss_pred cCCCccchHHHHHhhhhChHHHHHHHHhhccceeeccccccccCC---C-CCCCCCcccCCCchhHhhhcccccccCCCC
Q 007319 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRT---D-KSKHGGTWLPGSVLNIAECCLLPSNHRRKE 189 (608)
Q Consensus 114 y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~---~-~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~ 189 (608)
+...+.+|..++++++++++.||..+.+.. +.|.+++.++++.. . ...+..+|+.++.+|.+.+++++++ +++
T Consensus 19 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~a--~~~ 95 (663)
T 1ry2_A 19 SHMGLQDYQRLHKESIEDPAKFFGSKATQF-LNWSKPFDKVFIPDPKTGRPSFQNNAWFLNGQLNACYNCVDRHA--LKT 95 (663)
T ss_dssp -----CHHHHHHHHHHHCHHHHHHHHHHHH-CCEEECCSCSBCBCSSSCSBCSTTCCBSTTCEECHHHHHTHHHH--TTC
T ss_pred cCCChhhHHHHHHHHhcCHHHHHHHHHhhc-CeeecCCceeecCccccccCCCCCCCcCCCCCccHHHHHHHHHh--ccC
Confidence 445556789999999999999999998852 57999999988754 2 1233368999999999999998876 679
Q ss_pred CCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHH-hc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCC
Q 007319 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF 267 (608)
Q Consensus 190 pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~ 267 (608)
||++|+++.+. +.+..+++||+||+++++++|++|+ ++ |++||+|+|+++|++|+++++|||+++|++++|+++.+
T Consensus 96 pd~~Al~~~~~--~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~Gav~vpl~~~~ 173 (663)
T 1ry2_A 96 PNKKAIIFEGD--EPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRIGAIHSVVFAGF 173 (663)
T ss_dssp TTSEEEEEECS--STTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTS
T ss_pred CCceEEEEEcC--CCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeeCCCC
Confidence 99999998643 1234569999999999999999999 88 99999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhh---hCCC--cEEEEecCCC-CCCCCCCCCCccHHHhhcccCC
Q 007319 268 AAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAIGN-DVGIPLREQDLSWKDFLSSVDY 341 (608)
Q Consensus 268 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 341 (608)
+.+++.++++++++++||+++...+.++.++....+.+ .++. .++++..... .... .......|+++......
T Consensus 174 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 252 (663)
T 1ry2_A 174 SSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSVAF-HAPRDLDWATEKKKYKT 252 (663)
T ss_dssp CHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSCCC-CSSSEEEHHHHHTTSCS
T ss_pred CHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCcccc-CCCccccHHHHHhhcCC
Confidence 99999999999999999999887666665554433332 2222 3444432211 1000 11223567777654321
Q ss_pred CCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH-HhhhhcCCCCCcEEEEeccccccchh-HHhHHHH
Q 007319 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (608)
Q Consensus 342 ~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l 419 (608)
........++|++||+|||||||+||||+++|++++.... .....++++++|++++.+|++|+.++ +.++.+|
T Consensus 253 -----~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L 327 (663)
T 1ry2_A 253 -----YYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPL 327 (663)
T ss_dssp -----CCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHHHH
T ss_pred -----CCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhhHHHHHHHH
Confidence 1223345679999999999999999999999999876553 34456889999999999999999998 6789999
Q ss_pred HhCCeEEEeCCC---CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCc--CCCCCCccccEEEeecCCCChhhhHHHHhh
Q 007319 420 LNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (608)
Q Consensus 420 ~~G~~~vl~~~~---~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~ 494 (608)
+.|++++++++. +++..+++.|++++||+++++|++++.|.+... ....++++||.+++|||++++++++++.+.
T Consensus 328 ~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~ 407 (663)
T 1ry2_A 328 LYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEK 407 (663)
T ss_dssp HHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEECSSCCCHHHHHHHHHT
T ss_pred HhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEEcCCCCHHHHHHHHHH
Confidence 999999999753 478899999999999999999999999987653 345678999999999999999999999887
Q ss_pred cc--CCceeccccccccccccccCCC--CCCCccCccCcCCCCcEEEEECC-CCCcCCC-CCCceeeEEE-e--cccCCC
Q 007319 495 AW--YNAIIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDE-CGVPYPD-DQPCVGEVGL-F--PLYLGA 565 (608)
Q Consensus 495 ~~--~~~i~~~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~~~I~d~-~g~~~p~-g~~~~Gel~v-~--~~~~~~ 565 (608)
++ .++++|.||+||+++.++.... ..+.+.+++|+|++|++++|+|+ +|++++. |+ +|||+| + |+++.
T Consensus 408 ~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~v~~~g~--~Gel~i~g~~p~~~~- 484 (663)
T 1ry2_A 408 IGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTGEELNTSHA--EGVLAVKAAWPSFAR- 484 (663)
T ss_dssp TSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSSTTCEECSSC--EEEEEESSCCTTSCC-
T ss_pred hCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEcCCCCCcCCCCCc--ceEEEEecCCCchhc-
Confidence 65 3789999999999875554432 23456789999999999999998 9999998 88 599999 4 34444
Q ss_pred ccccc-CchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 566 SDRLL-NADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 566 ~~~~~-~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+|| +++.+.+.|... .+| ||+|| ++|+||+|+|+||+
T Consensus 485 --gy~~~~~~~~~~~~~~--~~g--~y~TGDlg~~d~dG~l~i~GR~ 525 (663)
T 1ry2_A 485 --TIWKNHDRYLDTYLNP--YPG--YYFTGDGAAKDKDGYIWILGRV 525 (663)
T ss_dssp --EETTCHHHHHHHHTSS--STT--SEEEEEEEEECTTCCEEECSCT
T ss_pred --ccccChHHHHHhhhcC--CCC--EEEcCCEEEEcCCCCEEEEeec
Confidence 455 445565444221 123 99999 99999999999995
No 3
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=1.3e-64 Score=563.32 Aligned_cols=468 Identities=24% Similarity=0.354 Sum_probs=371.7
Q ss_pred chHHHHHhhhhChHHHHHHHHhhccceeeccccccccCCCC-CCCCCcccCCCchhHhhhcccccccCCCCCCcEEEEEe
Q 007319 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK-SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (608)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Av~~~ 198 (608)
+|..+++.++++++.||..+++. +.|.+++.++++.... ..+..+|+.++.+|.+.+++++++ +++||++|+++.
T Consensus 23 ~y~~l~~~~~~~p~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~a--~~~pd~~Al~~~ 98 (652)
T 1pg4_A 23 QYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAIIWE 98 (652)
T ss_dssp HHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEEEEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHhh--CceecCCcccccCccccCCCCCEECCCCChhHHHHHHHHHh--ccCCCceEEEEE
Confidence 57889999999999999999885 5788888888764321 133568999999999999998765 678999999985
Q ss_pred cCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHH
Q 007319 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (608)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~ 277 (608)
+. +.+..+++||+||+++++++|++|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++
T Consensus 99 ~~--~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~ 176 (652)
T 1pg4_A 99 GD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCII 176 (652)
T ss_dssp CS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHHHHH
T ss_pred cC--CCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHH
Confidence 43 123456999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCceEEEeecceeecCcccCchHhHhh---hCC----CcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCCCCCCCC
Q 007319 278 VSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSP 350 (608)
Q Consensus 278 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 350 (608)
++++++||+++.....++.++....+.+ ..+ ..++++...+..... .......|++++..... ....
T Consensus 177 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~ 250 (652)
T 1pg4_A 177 DSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----EHQP 250 (652)
T ss_dssp HHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----CCCC
T ss_pred hcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCcccc-cCCCceeHHHHHhhcCC-----CCCc
Confidence 9999999999887666555554433322 221 234444322111100 01123457777654322 1222
Q ss_pred CcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH-HhhhhcCCCCCcEEEEeccccccchh-HHhHHHHHhCCeEEEe
Q 007319 351 VYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALY 428 (608)
Q Consensus 351 ~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~~vl~ 428 (608)
....++|++||+|||||||+||||+++|++++..+. .....++++++|++++.+|++|+.++ +.++.+|+.|++++++
T Consensus 251 ~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~ 330 (652)
T 1pg4_A 251 EAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMF 330 (652)
T ss_dssp CCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEE
T ss_pred cccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEE
Confidence 345679999999999999999999999999876553 34456889999999999999999998 6789999999999999
Q ss_pred CCC---CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCc--CCCCCCccccEEEeecCCCChhhhHHHHhhcc--CCcee
Q 007319 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAII 501 (608)
Q Consensus 429 ~~~---~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~--~~~i~ 501 (608)
++. +++..+++.|++++||+++++|++++.|++... ....++++||.+++|||++++++++++.+.++ .++++
T Consensus 331 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~ 410 (652)
T 1pg4_A 331 EGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVV 410 (652)
T ss_dssp CSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEE
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEE
Confidence 753 478899999999999999999999999988653 34567899999999999999999999988765 27899
Q ss_pred ccccccccccccccCCC-CCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-e--cccCCCcccccC-chhhc
Q 007319 502 ESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-F--PLYLGASDRLLN-ADHEE 576 (608)
Q Consensus 502 ~~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~--~~~~~~~~~~~~-~~~t~ 576 (608)
|.||+||+++.++.... ..+...+++|+|++|++++|+|++|+++|.|+ +|||+| + |+.+. +|++ ++.+.
T Consensus 411 ~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d~~g~~v~~g~--~GEl~i~g~~p~~~~---gY~~~~e~~~ 485 (652)
T 1pg4_A 411 DTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGAT--EGNLVITDSWPGQAR---TLFGDHERFE 485 (652)
T ss_dssp EEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSE--EEEEEECSCCTTCCC---EETTCHHHHH
T ss_pred ccccCcccccceecCCCCCcCccCCccccCcCCCeEEEECCCCCCcCCCc--eEEEEEccCCCchhh---hhcCCHHHHH
Confidence 99999999875554332 22456789999999999999999999999998 499999 4 34443 4554 45554
Q ss_pred cccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 577 VYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 577 ~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
..|... .+.||+|| ++|+||+|+|+||+
T Consensus 486 ~~~~~~----~~g~y~TGDlg~~d~dG~l~i~GR~ 516 (652)
T 1pg4_A 486 QTYFST----FKNMYFSGDGARRDEDGYYWITGRV 516 (652)
T ss_dssp HHHHSS----STTSEEEEEEEEECTTSCEEEEEES
T ss_pred hhhhhc----CCCEEECCcEEEEcCCCcEEEEecC
Confidence 433211 12399999 99999999999995
No 4
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=4.2e-60 Score=522.87 Aligned_cols=371 Identities=18% Similarity=0.161 Sum_probs=306.1
Q ss_pred cCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEec
Q 007319 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 185 ~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl 263 (608)
+++++||++|+++.++ ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+|+|++++|+
T Consensus 36 ~a~~~Pd~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~vpl 107 (620)
T 4dg8_A 36 MAALHPHREAIRDRFG--------SVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHYLYI 107 (620)
T ss_dssp HHHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHhCCCCeEEEcCCC--------cCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEee
Confidence 4578999999998877 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
||.+|.+++.+++++++++++++++........ . ... .+......
T Consensus 108 d~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~~----------~--~~~------------------~~~~~~~~----- 152 (620)
T 4dg8_A 108 DLKQPAAWNAELCRQVDCRLILDCSTTPTPANG----------L--PCV------------------PVRHLPAA----- 152 (620)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECCSSCCCCTT----------S--CEE------------------EGGGCCCC-----
T ss_pred CccChHHHHHHHHHhCCCcEEEecCcccccccC----------C--cee------------------eeccCCcC-----
Confidence 999999999999999999999976542110000 0 000 00110000
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCC
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (608)
..........++|+|||+|||||||+||||+++|+++.+.+.+ ...++++++|++++.+|++|+.++++++.+|+.|+
T Consensus 153 -~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 230 (620)
T 4dg8_A 153 -PASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGG 230 (620)
T ss_dssp -CCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTC
T ss_pred -CccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCC
Confidence 0111222346799999999999999999999999999877655 55678999999999999999999999999999999
Q ss_pred eEEEeC-CCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceec
Q 007319 424 TLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (608)
Q Consensus 424 ~~vl~~-~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~ 502 (608)
++++.+ ...++..+++.|+++++|++.++|++++.|.+.. ..++++||.+++|||+++++..+++...+++++++|
T Consensus 231 ~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n 307 (620)
T 4dg8_A 231 CCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVN 307 (620)
T ss_dssp EEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEE
T ss_pred EEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEe
Confidence 999975 3468899999999999999999999999998753 235789999999999999998888877777789999
Q ss_pred cccccccccccccCCC---CCCCccCccCcCCCCcEEEEECCCCCc-CCCCCCceeeEEE-ecccCCCcccccCchhhcc
Q 007319 503 SCGGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDECGVP-YPDDQPCVGEVGL-FPLYLGASDRLLNADHEEV 577 (608)
Q Consensus 503 ~YG~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~I~d~~g~~-~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~ 577 (608)
.||+||+++.++.... .......++|+|++|++++|+|+++++ +|.|++ |||+| +++...| |+.+++.|++
T Consensus 308 ~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~~g~~--GEl~i~G~~v~~G--Y~~~p~~t~~ 383 (620)
T 4dg8_A 308 GYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRA--GEIVAFGAGLAQG--YRNDAARTRA 383 (620)
T ss_dssp EECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEECTTSCBCCSSSCC--EEEEEEETTCCSE--ETTCHHHHHH
T ss_pred eEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEECccCCCCCCCCCc--eEEEEeccccccc--cCCChhhhhh
Confidence 9999999875443221 122345789999999999999999988 789995 99999 6655543 2236789999
Q ss_pred ccccCCCCCCC--eEeeee---EEcCCCeEEEEcCC
Q 007319 578 YFRGMPMYKGM--EAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 578 ~f~~~p~~~~~--~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.|..+|. .+. +||+|| ++|+||+|+|+||+
T Consensus 384 ~f~~~p~-~~~~~~~yrTGDl~~~~~dG~l~~~GR~ 418 (620)
T 4dg8_A 384 SFVELPY-RGRLLRAYRTGDRARYDEQGRLRFIGRG 418 (620)
T ss_dssp HEEEEEE-TTEEEEEEEEEEEEEECTTSCEEEEECS
T ss_pred hhccCCC-CCCCceEEeCCCEEEECCCCeEEEEccC
Confidence 9988774 343 899999 99999999999995
No 5
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.6e-59 Score=513.62 Aligned_cols=412 Identities=15% Similarity=0.134 Sum_probs=327.5
Q ss_pred cccCCCchhHhhhcccccccCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCH
Q 007319 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (608)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~ 244 (608)
.|.....+|....++++++ +++||++|+++.+. .+..+++||+||+++++++|++|+++ |++||+|+|+++|++
T Consensus 48 ~~~~~~~~n~~~~~l~~~a--~~~pd~~Al~~~~~---~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~ 122 (580)
T 3etc_A 48 KILVPENFNFAYDVVDVYA--RDSPEKLAMIWCDD---YGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRY 122 (580)
T ss_dssp CBCCCSSCCHHHHTHHHHH--HHCTTCEEEEEEES---SSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCT
T ss_pred CCCCcccchHHHHHHHHHH--hhCCCCEEEEEEcC---CCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Confidence 4666667788877777765 78999999998543 13456999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCC---CcEEEEecCCCCC
Q 007319 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDV 321 (608)
Q Consensus 245 e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 321 (608)
++++++|||+|+|++++|+++.++.+++.+++++++++++|++.+.. ..+....+...++ ...+.+...
T Consensus 123 e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---- 194 (580)
T 3etc_A 123 DFWYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDD----VPEQVDEAHAECGDIPLKKAKVGGD---- 194 (580)
T ss_dssp HHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTT----HHHHHHHHHHHHCSCCCEEEEESSS----
T ss_pred HHHHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchh----HHHHHHHHhhhCCCcceEEEEeCCc----
Confidence 99999999999999999999999999999999999999999987521 0012222222222 223333211
Q ss_pred CCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEE
Q 007319 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYC 401 (608)
Q Consensus 322 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l 401 (608)
...+...+.+.+...... ...........++|+|+|+|||||||+||||+++|++++..+......+++.++++++
T Consensus 195 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (580)
T 3etc_A 195 ---VLEGWIDFRKELEESSPI-FERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHY 270 (580)
T ss_dssp ---CCTTCEEHHHHHHHSCSC-CCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEE
T ss_pred ---cccccccHHHHHhhCCcc-cccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEE
Confidence 012345566665543320 0001111245679999999999999999999999999888776666667889999999
Q ss_pred EeccccccchhHH-hHHHHHhCCeEEEeC-CCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEee
Q 007319 402 WPTNLGWVMGPVI-LFSSFLNGATLALYQ-GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (608)
Q Consensus 402 ~~~~~~~~~~~~~-~~~~l~~G~~~vl~~-~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~g 479 (608)
+..|++|+.+.+. ++.+++.|+++++.+ ..+++..+++.|+++++|+++++|++++.|.+.. ....++++||.+++|
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~l~~lr~i~~g 349 (580)
T 3etc_A 271 TVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHYNFSTLKYAVVA 349 (580)
T ss_dssp ECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---CCTTCCEEEEC
T ss_pred EeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccCCCccceEEEEc
Confidence 9999999988865 788999999999985 4678999999999999999999999999998863 345678999999999
Q ss_pred cCCCChhhhHHHHhhccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEEe
Q 007319 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (608)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v~ 559 (608)
||++++++.+++.+.++ ++++|.||+||+++.++.. .......+++|+|++|++++|+|++|+++|+|+. |||+|.
T Consensus 350 Ge~l~~~~~~~~~~~~g-~~i~~~YG~TE~~~~~~~~-~~~~~~~~~~G~p~~~~~v~ivd~~g~~~~~g~~--GEl~v~ 425 (580)
T 3etc_A 350 GEPLNPEVFNRFLEFTG-IKLMEGFGQTETVVTIATF-PWMEPKPGSIGKPTPGYKIELMDRDGRLCEVGEE--GEIVIN 425 (580)
T ss_dssp SSCCCHHHHHHHHHHHS-CCCEEEECCTTSSCCEECC-TTSCCCTTCCBEECTTCEEEEECTTSCBCCTTCC--EEEEEE
T ss_pred cCCCCHHHHHHHHHHhC-CeEecccccccccceeecC-CCCCCCCCccccCCCCCEEEEECCCCCCCCCCCc--eEEEEe
Confidence 99999999999887764 7899999999998654433 3334567899999999999999999999999995 999993
Q ss_pred ------cccCCCcccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 560 ------PLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 560 ------~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++.+.+ |+.+++.|++.|. ++||+|| ++|+||+|+|+||+
T Consensus 426 ~~~g~~~~~~~g--Y~~~p~~t~~~f~-------~gwy~TGDlg~~d~dG~l~~~GR~ 474 (580)
T 3etc_A 426 TMEGKPVGLFVH--YGKDPERTEETWH-------DGYYHTGDMAWMDEDGYLWFVGRA 474 (580)
T ss_dssp CTTCCCTTCCCE--ETTCHHHHHHHEE-------TTEEEEEEEEEECTTSCEEEEEES
T ss_pred cCCCCCCeeecc--ccCCHhHHHhhcC-------CCEEecCcEEEECCCCcEEEEecC
Confidence 344432 3346778888884 2399999 99999999999995
No 6
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=3.6e-59 Score=510.50 Aligned_cols=395 Identities=16% Similarity=0.115 Sum_probs=322.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+.....+..+++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 29 a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 29 AEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp HHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEccC
Confidence 47899999999987322223345999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
|.++.+++.+++++++++++|+++... +....+........+++... ....+.++......
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~--- 169 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLY------ENFKPVLEKTGVERVFVVGG----------EVNSLSEVMDSGSE--- 169 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGH------HHHHHHHTTSCCCEEEEETC----------SSSCHHHHHHHSCS---
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHHhhCCCcEEEEeCC----------CCcCHHHHHhcCcc---
Confidence 999999999999999999999997532 22233333333333333211 23456666654432
Q ss_pred CCCCCCCcCC-CCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCC
Q 007319 345 PNYYSPVYNP-VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (608)
Q Consensus 345 ~~~~~~~~~~-~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (608)
........ ++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.++..|+
T Consensus 170 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~l~~G~ 247 (549)
T 3g7s_A 170 --DFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGLVNLMVTVGN 247 (549)
T ss_dssp --CCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHHHTTHHHHCC
T ss_pred --ccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCc
Confidence 11122233 389999999999999999999999999998888888889999999999999999999877888999999
Q ss_pred eEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCC--CCCccccEEEeecCCCChhhhHHHHhh----cc-
Q 007319 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSK----AW- 496 (608)
Q Consensus 424 ~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~--~~l~~Lr~i~~gGe~l~~~~~~~~~~~----~~- 496 (608)
++++.+ .+++..+++.|+++++|+++++|+++..|++...... .++++||.+++||+++++++.+++.+. ++
T Consensus 248 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~ 326 (549)
T 3g7s_A 248 EYVVMG-MFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNN 326 (549)
T ss_dssp EEEEES-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSC
T ss_pred eEEEcC-CCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHHHHHHHHHHHhhcCC
Confidence 999987 6789999999999999999999999999987643322 578999999999999999998888766 33
Q ss_pred -CCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCch
Q 007319 497 -YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNAD 573 (608)
Q Consensus 497 -~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~ 573 (608)
..+++|.||+||+++.++..........+++|+|++|++++|+| ++|+++|.|+. |||+| +++.+.+ |+.+++
T Consensus 327 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~ 402 (549)
T 3g7s_A 327 PRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMSDIELKVISLEDGRELGVGES--GEIVIRGPNIFKG--YWKREK 402 (549)
T ss_dssp TTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECTTCEEEEECSSSCCEECTTCC--EEEEEESTTSCSE--ETTCTT
T ss_pred ccccccceEeccccchhhhcCCccccCcCCCccccCCCCEEEEEeCCCCcCCCCCCc--eEEEEECcchhhh--hCCChh
Confidence 37899999999998765554444445678999999999999999 89999999995 99999 6555443 233678
Q ss_pred hhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 574 HEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 574 ~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.|++.|..++ .|.+||+|| ++|+||+|+|+||+
T Consensus 403 ~t~~~f~~~~--~g~~~~~TGDl~~~~~dG~l~~~GR~ 438 (549)
T 3g7s_A 403 ENQECWWYDE--KGRKFFRTGDVGFIDEEGFLHFQDRV 438 (549)
T ss_dssp GGGTSEEECT--TCCEEEEEEEEEEECTTSCEEEEEEC
T ss_pred hhhhhhhccC--CCCceEccCcEEEEcCCceEEEeccc
Confidence 8888885333 467899999 99999999999995
No 7
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=9.1e-59 Score=505.83 Aligned_cols=388 Identities=18% Similarity=0.191 Sum_probs=316.0
Q ss_pred cCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEec
Q 007319 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 185 ~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl 263 (608)
+++++||++|+++.+.+ +++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 31 ~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 31 NLSNHSSKPCLINGANG------DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAA 104 (536)
T ss_dssp TGGGSTTSEEEEETTTC------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEC
T ss_pred HhhcCCCceEEEECCCC------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCEEecc
Confidence 34789999999986321 3899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
+|.++.+++.+++++++++++|+++... +............++.+... ..+...++++......
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-- 168 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYY------EKVKDFARESDVKVMCVDSA--------PDGCLHFSELTQADEN-- 168 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGT------HHHHHHHHHHTCEEEESSCC--------CTTCEETHHHHTSCGG--
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHH------HHHHHHHhhcCceEEEecCC--------CCCccCHHHHhhcccc--
Confidence 9999999999999999999999987532 22222222222233333211 1233455665543221
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhh----hcCCCCCcEEEEeccccccchh-HHhHHH
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (608)
..+.....++|+|+|+|||||||+||||+++|+++++.+..... .+++.++|++++.+|++|+.++ ..++.+
T Consensus 169 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~ 245 (536)
T 3ni2_A 169 ---EAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNSIMLCG 245 (536)
T ss_dssp ---GCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHHTHHHH
T ss_pred ---ccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHHHHHHH
Confidence 12233456799999999999999999999999999887665432 4568899999999999999998 457889
Q ss_pred HHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCC
Q 007319 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (608)
Q Consensus 419 l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (608)
+..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++++.++++
T Consensus 246 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~ 324 (536)
T 3ni2_A 246 LRVGAPILIMP-KFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQA 324 (536)
T ss_dssp HHHTCCEEECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTS
T ss_pred HhcCCEEEEcC-CCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHHCCCC
Confidence 99999999987 57889999999999999999999999999988766667899999999999999999999999888778
Q ss_pred ceeccccccccccccccCC----CCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCc
Q 007319 499 AIIESCGGTELSSAYIQGS----LLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNA 572 (608)
Q Consensus 499 ~i~~~YG~TE~~~~~~~~~----~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~ 572 (608)
+++|.||+||++..++.+. .......+++|+|++|++++|+| ++|+++|.|+. |||+| +++.+.+ |+.++
T Consensus 325 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~p 400 (536)
T 3ni2_A 325 RLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRNQP--GEICIRGDQIMKG--YLNDP 400 (536)
T ss_dssp EEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSE--ETTCH
T ss_pred CccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCCCc--cEEEEeCcccchh--hcCCh
Confidence 9999999999986544321 12234568899999999999999 67999999995 99999 6655543 23367
Q ss_pred hhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 573 DHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 573 ~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.|++.|. +++||+|| ++|+||+|+|+||+
T Consensus 401 ~~t~~~~~------~~g~~~TGDl~~~~~dG~l~~~GR~ 433 (536)
T 3ni2_A 401 EATSRTID------KEGWLHTGDIGYIDDDDELFIVDRL 433 (536)
T ss_dssp HHHHHHBC------TTSCEEEEEEEEECTTSCEEEEEEC
T ss_pred hHHHhhcc------CCCceEcccEEEEcCCceEEEEecc
Confidence 88888884 23499999 99999999999995
No 8
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=2.4e-58 Score=506.01 Aligned_cols=373 Identities=17% Similarity=0.172 Sum_probs=307.1
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 85 a~~~pd~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl~ 156 (570)
T 4gr5_A 85 AARAPDAVALLHEAD--------ELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGYTMLD 156 (570)
T ss_dssp HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCCeEEECCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEEEEcC
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
|.++.+++.+++++++++++|+++.... .......++.... .....
T Consensus 157 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~~----------------~~~~~----- 202 (570)
T 4gr5_A 157 PQFPVERLALSLEDTGAPLLVTSRPLSG-------------RLTGTTTLYVEDE----------------AASDA----- 202 (570)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECTTTTT-------------SSCSSEEEECCC---------------------------
T ss_pred CCChHHHHHHHHHhcCCCEEEecchhhh-------------cccCCcceeeecc----------------ccccc-----
Confidence 9999999999999999999999875311 1111111111000 00000
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCe
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (608)
..........++|+|+|+|||||||.||||+++|+++.+.+.. ...++++++|++++.+|++|+.+.+.++.+++.|++
T Consensus 203 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 281 (570)
T 4gr5_A 203 PAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGAR 281 (570)
T ss_dssp -CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCE
T ss_pred cccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCE
Confidence 0111223456799999999999999999999999998776654 455678999999999999999888889999999999
Q ss_pred EEEeCC-CCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceecc
Q 007319 425 LALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (608)
Q Consensus 425 ~vl~~~-~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~ 503 (608)
+++.+. .+++..+++.|+++++|++.++|+++..|.+... .++++||.+++|||++++++.+++.+.+++++++|.
T Consensus 282 ~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~ 358 (570)
T 4gr5_A 282 CVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP---EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNG 358 (570)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEE
T ss_pred EEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEe
Confidence 999864 4688899999999999999999999999987643 347899999999999999998888888877899999
Q ss_pred ccccccccccccCCC---CCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcccc
Q 007319 504 CGGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYF 579 (608)
Q Consensus 504 YG~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f 579 (608)
||+||+++.++.... .......++|+|++|++++|+|++++++|.|+ +|||+| +++.+.+ |+.+++.|++.|
T Consensus 359 YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~~~~~~~G~--~GEl~v~g~~v~~G--Y~~~~~~t~~~f 434 (570)
T 4gr5_A 359 YGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLDDDLKPAANGA--LGELYVAGAGLAHG--YVSRPALTAERF 434 (570)
T ss_dssp ECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEECTTSCBCCTTC--EEEEEEEETTCCCE--ETTCHHHHHHHE
T ss_pred echhhheeeeeeeeecccccCCCccccceeeCCCEEEEECCCCCCCCCCC--cEEEEEeecccchh--cCCCchhhhccc
Confidence 999999865443221 12234567999999999999999999999999 599999 6666553 233678899999
Q ss_pred ccCCC--CCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 580 RGMPM--YKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 580 ~~~p~--~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
..+|+ ..+++||+|| ++|+||+|+|+||+
T Consensus 435 ~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~ 468 (570)
T 4gr5_A 435 VADPFAGPGGERMYRTGDLARRRADGVLEYVGRA 468 (570)
T ss_dssp EECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC-
T ss_pred ccCCCCCCCCCEEEeCCCeEEECCCCeEEEEccc
Confidence 87765 3467899999 99999999999995
No 9
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=8.6e-58 Score=500.11 Aligned_cols=370 Identities=17% Similarity=0.153 Sum_probs=300.9
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 49 a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 120 (563)
T 1amu_A 49 VSKRPNNVAIVCENE--------QLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPID 120 (563)
T ss_dssp HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCCeEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEeC
Confidence 378999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCC--CcEEEEecCCCCCCCCCCCCCccHHHhhcccCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (608)
+.++.+++.+++++++++++|+++... ....... ..+..+.. . .+ .. ...
T Consensus 121 ~~~~~~~l~~il~~~~~~~li~~~~~~----------~~~~~~~~~~~~~~~~~--~-----------~~---~~-~~~- 172 (563)
T 1amu_A 121 IEYPKERIQYILDDSQARMLLTQKHLV----------HLIHNIQFNGQVEIFEE--D-----------TI---KI-REG- 172 (563)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH----------HHHTTSCCCSEEEECCC--S-----------TT---TT-SCC-
T ss_pred CCCcHHHHHHHHHhcCCCEEEEcCchh----------hhhhhccccCceeeecc--h-----------hh---cc-ccC-
Confidence 999999999999999999999987531 1111111 11111110 0 00 00 000
Q ss_pred CCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhC
Q 007319 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (608)
Q Consensus 343 ~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (608)
........++|+|+|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+++.|
T Consensus 173 ----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 248 (563)
T 1amu_A 173 ----TNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALLTG 248 (563)
T ss_dssp ----SCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHHHHHHHTTT
T ss_pred ----ccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHHCC
Confidence 0111234578999999999999999999999999998888777788999999999999999999998889999999
Q ss_pred CeEEEeCCC--CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCce
Q 007319 423 ATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (608)
Q Consensus 423 ~~~vl~~~~--~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i 500 (608)
+++++.+.. .++..+++.|+++++|++.++|+++..|... .+++||.+++||+++++++.+++.+. .++
T Consensus 249 ~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~ 319 (563)
T 1amu_A 249 ASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------RILSIQTLITAGSATSPSLVNKWKEK---VTY 319 (563)
T ss_dssp CEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------TCCSCSEEEEESSCCCHHHHHHHTTT---SEE
T ss_pred CEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------ccccccEEEEEEecCCHHHHHHHHhC---CeE
Confidence 999998632 4788999999999999999999999877532 36789999999999999998888754 689
Q ss_pred eccccccccccccccCCCC--CCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcc
Q 007319 501 IESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEV 577 (608)
Q Consensus 501 ~~~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~ 577 (608)
+|.||+||++++++..... ......++|+|++|++++|+|++|+++|.|+ +|||+| +++.+.| |+.+++.|++
T Consensus 320 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~g~--~GEl~v~g~~v~~G--Y~~~pe~t~~ 395 (563)
T 1amu_A 320 INAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLKSVGE--AGELCIGGEGLARG--YWKRPELTSQ 395 (563)
T ss_dssp EEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECTTSCBCCTTC--EEEEEEEETTCCCE--ETTCHHHHHH
T ss_pred EEEECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEECCCcCCCCCCC--cEEEEEechhhChh--hCCCchhhhh
Confidence 9999999998654432221 2234578999999999999999999999999 499999 6665553 2336788999
Q ss_pred ccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 578 YFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 578 ~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.|..+|+.+|++||+|| ++|+||+|+|+||+
T Consensus 396 ~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~ 429 (563)
T 1amu_A 396 KFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRI 429 (563)
T ss_dssp HEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEG
T ss_pred hcccCCCCCCCEEEecCCEEEEcCCCeEEEeccc
Confidence 99888887788999999 99999999999995
No 10
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.9e-57 Score=491.36 Aligned_cols=379 Identities=19% Similarity=0.175 Sum_probs=306.7
Q ss_pred CCCCCcEEEEEe--cCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEec
Q 007319 187 RKEDNTVAIVWR--EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 187 ~~~pd~~Av~~~--~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl 263 (608)
+++|+++|++.. ++ +++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 11 ~~~p~~~a~~~~~~~~-------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl 83 (503)
T 4fuq_A 11 DKLDDPHKLAIETAAG-------DKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL 83 (503)
T ss_dssp SCCSCTTSEEEEETTC-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred HhCCCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEec
Confidence 678888887742 22 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
++.++.+++.+++++++++++|+++... +....+.......+..+... ....+.+.......
T Consensus 84 ~~~~~~~~l~~il~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-- 145 (503)
T 4fuq_A 84 NTAYTLHELDYFITDAEPKIVVCDPSKR------DGIAAIAAKVGATVETLGPD----------GRGSLTDAAAGASE-- 145 (503)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEECGGGT------TTTHHHHHHHTCEEEECCTT----------SCSHHHHHHHTSCS--
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhh------HHHHHHHhhcCceEEEecCC----------cccccchhhhcCCC--
Confidence 9999999999999999999999997532 22233333222222222111 11112222221111
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhH-HhHHHHHhC
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNG 422 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~G 422 (608)
........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++. .++.+++.|
T Consensus 146 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g 222 (503)
T 4fuq_A 146 ---AFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFAR 222 (503)
T ss_dssp ---CCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTT
T ss_pred ---CcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhC
Confidence 1223345679999999999999999999999999999888888889999999999999999999874 467889999
Q ss_pred CeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceec
Q 007319 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (608)
Q Consensus 423 ~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~ 502 (608)
+++++.+ .+++..+++.++ ++|++.++|+++..|++.......+++++|.+++|||++++++.+++...++ .+++|
T Consensus 223 ~~~~~~~-~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~-~~~~~ 298 (503)
T 4fuq_A 223 GSMIFLP-KFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTG-HAVLE 298 (503)
T ss_dssp CEEEECS-SCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHS-CCEEE
T ss_pred CEEEEcC-CCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhC-CCccc
Confidence 9999987 678899999997 8999999999999999887666667899999999999999999998887765 78999
Q ss_pred cccccccccccccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccc
Q 007319 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFR 580 (608)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~ 580 (608)
.||+||++..++ .........+++|+|++|++++|+| ++|+++|.|+. |||+| +++.+.+ |+.+++.|++.|.
T Consensus 299 ~YG~TE~~~~~~-~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t~~~f~ 373 (503)
T 4fuq_A 299 RYGMTETNMNTS-NPYDGDRVPGAVGPALPGVSARVTDPETGKELPRGDI--GMIEVKGPNVFKG--YWRMPEKTKSEFR 373 (503)
T ss_dssp CCEETTTEECBC-CCSSSCCCTTEEEEBCTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCCC--BTTCHHHHHHTBC
T ss_pred eEcccccCcccc-cCCCCCCcCCccccCCCCeEEEEEECCCCCCCcCCCc--eEEEEECCchhhh--hcCChhhhHhhhC
Confidence 999999987533 3333345567899999999999999 88999999995 99999 6655543 2336788888885
Q ss_pred cCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 581 GMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 581 ~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.+ +||+|| ++|+||+|+|+||+
T Consensus 374 ~~------g~~~TGDl~~~~~dG~l~~~GR~ 398 (503)
T 4fuq_A 374 DD------GFFITGDLGKIDERGYVHILGRG 398 (503)
T ss_dssp TT------SCEEEEEEEEECTTCEEEECCSS
T ss_pred CC------CCeEcceeEEEcCCCcEEEEecC
Confidence 32 389999 99999999999995
No 11
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=5.2e-58 Score=500.55 Aligned_cols=390 Identities=16% Similarity=0.152 Sum_probs=311.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 40 a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vpl~ 111 (544)
T 3o83_A 40 VQSHPHSLAIICGER--------QLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNAL 111 (544)
T ss_dssp HHHCTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHhCCCceEEEcCCC--------ceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEecCC
Confidence 478999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-cEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
+.++.+++.+++++++++++|+++..... ........+...... ..+++..... ....+.++......
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-- 180 (544)
T 3o83_A 112 YSHRQYELNAFIKQIQPKLLIGSRQHEVF-SNNQFIDSLHDVNLSPEIILMLNHQA--------TDFGLLDWIETPAE-- 180 (544)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEEETTSGGG-SSSHHHHHHHHTTCCCSEEEEETCCT--------TSEEHHHHHHSCCS--
T ss_pred CCCCHHHHHHHHHhcCeeEEEEccccccc-cHHHHHHHHhhcccCcceEEEecCCc--------cccchhhhhhcccc--
Confidence 99999999999999999999998753210 001112222222222 2222221110 11234444433221
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhH--HhHHHHHh
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~ 421 (608)
.........++|+|+|+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|.++.. .++.+++.
T Consensus 181 --~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~ 258 (544)
T 3o83_A 181 --TFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHA 258 (544)
T ss_dssp --SCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHT
T ss_pred --cccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecchHHHHHHHHc
Confidence 11112345679999999999999999999999999999988888889999999999999999987764 58899999
Q ss_pred CCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCcee
Q 007319 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (608)
Q Consensus 422 G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~ 501 (608)
|+++++.+ .+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.+ +++++
T Consensus 259 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~ 336 (544)
T 3o83_A 259 GGCVVMAP-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVPEVL-NCKLQ 336 (544)
T ss_dssp TCEEEECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHHHHH-CSEEE
T ss_pred CCEEEECC-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHHHHh-CCcEE
Confidence 99999987 57889999999999999999999999999887554455688999999999999999999888776 48899
Q ss_pred ccccccccccccccCCCCCCCccCccCcCC-CCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcccc
Q 007319 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYF 579 (608)
Q Consensus 502 ~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f 579 (608)
|.||+||+++.++...........++|+|+ ++++++|+|++|+++|+|+. |||+| +++.+.+ |+.+++.|++.|
T Consensus 337 ~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t~~~f 412 (544)
T 3o83_A 337 QVFGMAEGLVNYTRLDDSDEQIFTTQGRPISSDDEIKIVDEQYREVPEGEI--GMLATRGPYTFCG--YYQSPEHNSQVF 412 (544)
T ss_dssp EEEECTTSCEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCC--EEEEEECTTSCSC--CTTCHHHHHHHB
T ss_pred eeeccccccceeecCCCchhhccCCCceecCCCcEEEEECCCCCCCCCCCe--eEEEEecCCcchh--hcCChhhhhhhC
Confidence 999999987644332222223457899997 89999999999999999995 99999 6655543 233678888888
Q ss_pred ccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 580 RGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 580 ~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.. +.||+|| ++|+||+|+|+||+
T Consensus 413 ~~------~g~~~TGDlg~~~~dG~l~~~GR~ 438 (544)
T 3o83_A 413 DE------DNYYYSGDLVQRTPDGNLRVVGRI 438 (544)
T ss_dssp CT------TCCEEEEEEEEECTTSCEEEEEEE
T ss_pred CC------CCCeEcCCEEEEcCCCCEEEEeec
Confidence 43 3489999 99999999999994
No 12
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=3.2e-58 Score=501.68 Aligned_cols=386 Identities=15% Similarity=0.130 Sum_probs=308.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 35 a~~~p~~~A~~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~ 106 (539)
T 1mdb_A 35 AAKYGDRIAITCGNT--------HWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFAL 106 (539)
T ss_dssp HHHHTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHCCCCEEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeEEecCC
Confidence 367899999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-cEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
|.++.+++.+++++++++++|+++.... .........+....+. ..+++.... ..+.++......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-- 172 (539)
T 1mdb_A 107 PSHRSSEITYFCEFAEAAAYIIPDAYSG-FDYRSLARQVQSKLPTLKNIIVAGEA-----------EEFLPLEDLHTE-- 172 (539)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEESEETT-EEHHHHHHHHHHHCTTCCCEEEESCC-----------TTSEEGGGCCCC--
T ss_pred CCCCHHHHHHHHHhCCCCEEEecccccc-ccHHHHHHHHHhcCCCccEEEEcCCc-----------cchhhhhhcccc--
Confidence 9999999999999999999999875310 0000112223223332 122221110 012222221111
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhH--HhHHHHHh
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~ 421 (608)
........++|+|+|+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|++++. .++.+|+.
T Consensus 173 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~ 249 (539)
T 1mdb_A 173 ---PVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYA 249 (539)
T ss_dssp ---CCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHT
T ss_pred ---ccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHHHHHHHh
Confidence 1112345678999999999999999999999999998888877888999999999999999998875 58899999
Q ss_pred CCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCcee
Q 007319 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (608)
Q Consensus 422 G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~ 501 (608)
|+++++.+ .+++..+++.|+++++|++.++|+++..|++.......++++||.+++|||++++++.+++.+.++ ++++
T Consensus 250 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~ 327 (539)
T 1mdb_A 250 GGRVVLSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFG-CTLQ 327 (539)
T ss_dssp TCEEEECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHHHHTC-SEEE
T ss_pred CCEEEECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHHHHhC-CcEE
Confidence 99999987 578999999999999999999999999998765445567899999999999999999988887764 7899
Q ss_pred ccccccccccccccCCCCCCCccCccCcCCCC-cEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcccc
Q 007319 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMT-AGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYF 579 (608)
Q Consensus 502 ~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~-~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f 579 (608)
|.||+||+++.++..........+++|+|+++ .+++|+|++|+++|.|+. |||+| +++.+.| |+.+++.|++.|
T Consensus 328 ~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t~~~f 403 (539)
T 1mdb_A 328 QVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDVKPGET--GHLLTRGPYTIRG--YYKAEEHNAASF 403 (539)
T ss_dssp EEEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEECTTSCBCCTTCC--EEEEEECTTSCSS--CTTCHHHHHHHB
T ss_pred EEEcCCCCcccccCCCCcHHhcCCCCCcccCCCceEEEECCCCCCCcCCCc--ceEEeeCcccchh--hcCChhhhhhhc
Confidence 99999997653322111112245789999976 489999999999999995 99999 6655543 233677888888
Q ss_pred ccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 580 RGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 580 ~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
..+ .||+|| ++|+||+|+|+||+
T Consensus 404 ~~~------g~~~TGDlg~~~~dG~l~~~GR~ 429 (539)
T 1mdb_A 404 TED------GFYRTGDIVRLTRDGYIVVEGRA 429 (539)
T ss_dssp CTT------SCEEEEEEEEECTTSCEEEEEEG
T ss_pred cCC------CCeecCceEEECCCCcEEEeccc
Confidence 532 389999 99999999999995
No 13
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=2.5e-57 Score=491.81 Aligned_cols=375 Identities=19% Similarity=0.190 Sum_probs=312.8
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEec
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl 263 (608)
|+++||++|+++.++ ++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 11 a~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 82 (511)
T 3e7w_A 11 AETYPQTDAFRSQGQ--------SLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYIPV 82 (511)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHCCCCeEEEcCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEEec
Confidence 478999999998776 999999999999999999885 8899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 264 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
++.++.+++.+++++++++++|+++.... . .... ......++++......
T Consensus 83 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~-----~-------~~~~----------------~~~~~~~~~~~~~~~~-- 132 (511)
T 3e7w_A 83 DLSIPSERIAKIIESSGAELLIHAAGLSI-----D-------AVGQ----------------QIQTVSAEELLENEGG-- 132 (511)
T ss_dssp ETTSCHHHHHHHHHHHTCCEEEESSSCCT-----T-------CCCC----------------SSCEEEHHHHHTSCSC--
T ss_pred CCCChHHHHHHHHHhCCCCEEEecccccc-----h-------hccc----------------ccceecHhhhhccccC--
Confidence 99999999999999999999999764210 0 0000 0112234454443222
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCC
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (608)
.........++|+++|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+++.|+
T Consensus 133 --~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 210 (511)
T 3e7w_A 133 --SVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGG 210 (511)
T ss_dssp --CCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTC
T ss_pred --CccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHHHHHHHhcCC
Confidence 111223456789999999999999999999999999998888888899999999999999999999988999999999
Q ss_pred eEEEeCCC--CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCcee
Q 007319 424 TLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (608)
Q Consensus 424 ~~vl~~~~--~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~ 501 (608)
++++.+.. .++..+++.|+++++|++.++|+++..++.........++++|.+++|||++++++.+++.+.+++++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~ 290 (511)
T 3e7w_A 211 TLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIF 290 (511)
T ss_dssp EEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEE
T ss_pred EEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEE
Confidence 99998632 4788999999999999999999999999987666667789999999999999999999999998778999
Q ss_pred ccccccccccccccCCCC----CCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhc
Q 007319 502 ESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEE 576 (608)
Q Consensus 502 ~~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~ 576 (608)
|.||+||+++.++..... ......++|+|++|++++|+|++|+++|+|+. |||+| +++.+.+ |+.+++.|+
T Consensus 291 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t~ 366 (511)
T 3e7w_A 291 NTYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMDEEGQPLPEGEK--GEIVIAGPSVSRG--YLGEPELTE 366 (511)
T ss_dssp ECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEECTTSCBCCTTCC--EEEEEESTTSCCC--BTTCHHHHH
T ss_pred eCcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEECCCCCCCCCCCc--eEEEEecCccChh--hCCCcccch
Confidence 999999998754432211 22345689999999999999999999999995 99999 6655553 233678888
Q ss_pred cccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 577 VYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 577 ~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.|... .+.+||+|| ++ +||+|+|+||+
T Consensus 367 ~~f~~~---~g~~~~~TGDlg~~-~dG~l~~~GR~ 397 (511)
T 3e7w_A 367 KAFFSH---EGQWAYRTGDAGFI-QDGQIFCQGRL 397 (511)
T ss_dssp HHEEES---SSSEEEEEEEEEEE-ETTEEEEEEES
T ss_pred hhhcCC---CCCEEEeCCCeEEc-cCCeEEEEccc
Confidence 888643 256789999 66 69999999995
No 14
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=3.5e-57 Score=526.78 Aligned_cols=452 Identities=16% Similarity=0.144 Sum_probs=322.5
Q ss_pred HHHHHhhhhChHHHHHHHHhhccceeeccccccccCCCCCCCCCcccCCCchhHhhhcccccccCCCCCCcEEEEEecCC
Q 007319 122 RLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDR 201 (608)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Av~~~~~~ 201 (608)
++.+..+++++..++..+++.+......+.....-... ..........+.. ..+.+ +++++||++|+++...+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~tl~-~~l~~--~a~~~pd~~Al~~~~~~ 86 (979)
T 3tsy_A 14 LVPRGSHMARMAPQEQAVSQVMEKQSNNNNSDVIFRSK----LPDIYIPNHLSLH-DYIFQ--NISEFATKPCLINGPTG 86 (979)
T ss_dssp -------------------------------CCCBCCS----SCCCCCCTTSCHH-HHHTT--TGGGTTTSEEEEETTTC
T ss_pred cccCcchhhhhhhHHHHHHHhhhhcccCCCCCceeecC----CCCCCCCCCCCHH-HHHHH--HHHhCCCCeEEEECCCC
Confidence 88899999999999998888765443333222111110 0000001112222 22333 34789999999986321
Q ss_pred CCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcC
Q 007319 202 CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSK 280 (608)
Q Consensus 202 ~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~ 280 (608)
+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.+++++++
T Consensus 87 ------~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~ 160 (979)
T 3tsy_A 87 ------HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASN 160 (979)
T ss_dssp ------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHT
T ss_pred ------cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcC
Confidence 3899999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEE
Q 007319 281 AKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVN 360 (608)
Q Consensus 281 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ 360 (608)
++++|+++.+. +....+.......++.+.... ......+...+.++...... ...........++|+||
T Consensus 161 ~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ 229 (979)
T 3tsy_A 161 TKLIITEARYV------DKIKPLQNDDGVVIVCIDDNE---SVPIPEGCLRFTELTQSTTE--ASEVIDSVEISPDDVVA 229 (979)
T ss_dssp EEEEEECSTTT------TTSHHHHHTSCCEEEECCCCT---TSCCCTTEEEGGGTSSCCSG--GGGGSCCSCCCTTSEEE
T ss_pred CeEEEEChHHH------HHHHHHhhcCCceEEEeCCcc---cccCCcccccHHHHhhcccc--ccccCCcCCCCccceEE
Confidence 99999997542 233333333322333322111 11112233445555433221 00112233457899999
Q ss_pred EEeccCCCCCCcEEEeCCchhHHHHHHhhh----hcCCCCCcEEEEeccccccchhH-HhHHHHHhCCeEEEeCCCCChh
Q 007319 361 ILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGPV-ILFSSFLNGATLALYQGSPLER 435 (608)
Q Consensus 361 ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~~G~~~vl~~~~~~~~ 435 (608)
|+|||||||+||||+++|+++++.+..... .+++.++|++++.+|++|+.++. .++.++..|+++++.+ .+++.
T Consensus 230 i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~-~~~~~ 308 (979)
T 3tsy_A 230 LPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMP-KFEIN 308 (979)
T ss_dssp CCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECS-SCCHH
T ss_pred EEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeC-CCCHH
Confidence 999999999999999999999887765432 45688999999999999999984 4778899999999987 57889
Q ss_pred hHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceecccccccccccccc
Q 007319 436 SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQ 515 (608)
Q Consensus 436 ~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 515 (608)
.+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++.+.+++++++|.||+||++..++.
T Consensus 309 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~ 388 (979)
T 3tsy_A 309 LLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAM 388 (979)
T ss_dssp HHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEE
T ss_pred HHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHh
Confidence 99999999999999999999999998876667789999999999999999999999988888899999999999865443
Q ss_pred CC----CCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccccCCCCCCCe
Q 007319 516 GS----LLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYKGME 589 (608)
Q Consensus 516 ~~----~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~ 589 (608)
.. ...+...+++|+|++|++++|+| ++|+++|+|++ |||+| +++.+.+ |+.+++.|++.|.. ++
T Consensus 389 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~--GEl~i~g~~v~~G--Y~~~p~~t~~~f~~------~g 458 (979)
T 3tsy_A 389 SLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRNQP--GEICIRGHQIMKG--YLNNPAATAETIDK------DG 458 (979)
T ss_dssp CGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTTCC--EEEEEESTTSCSE--ETTCHHHHHHHBCT------TS
T ss_pred CCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCCCc--cEEEEECCCcccc--ccCChhhhhhhccC------CC
Confidence 21 12234567899999999999999 66999999995 99999 5655543 23367888888842 34
Q ss_pred Eeeee---EEcCCCeEEEEcCC
Q 007319 590 AWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 590 ~~~TG---~~~~dG~l~~~GR~ 608 (608)
||+|| ++|+||+|+|+||+
T Consensus 459 ~~~TGDl~~~~~dG~l~~~GR~ 480 (979)
T 3tsy_A 459 WLHTGDIGLIDDDDELFIVDRL 480 (979)
T ss_dssp CEEEEEEEEECTTSCEEEEEES
T ss_pred cEEcCCEEEEcCCceEEEecCC
Confidence 99999 99999999999995
No 15
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=6.8e-57 Score=498.94 Aligned_cols=384 Identities=15% Similarity=0.156 Sum_probs=308.3
Q ss_pred CCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCC
Q 007319 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (608)
Q Consensus 190 pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~ 268 (608)
||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+|+|++++|+++.++
T Consensus 39 pd~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~~vpl~~~~~ 110 (617)
T 3rg2_A 39 SDSIAVIDGER--------QLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQ 110 (617)
T ss_dssp CCSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEEECTTCC
T ss_pred CCCeEEecCCc--------eEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeEEccCCcccc
Confidence 99999998777 999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-cEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCCCCC
Q 007319 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (608)
Q Consensus 269 ~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 347 (608)
.+++.++++++++++++++....... .......+....+. ..+.+.... ....+.+....... .
T Consensus 111 ~~~l~~~l~~~~~~~vl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~-----~ 175 (617)
T 3rg2_A 111 RSELNAYASQIEPALLIADRQHALFS-GDDFLNTFVTEHSSIRVVQLLNDS---------GEHNLQDAINHPAE-----D 175 (617)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSGGGS-SSHHHHHHHHHSTTCCEEEEETCC---------STTBHHHHHHSCCS-----S
T ss_pred HHHHHHHHhhcCceEEEecccccccc-cHHHHHHHhhcCCccceeeecccc---------cccchhhhhccccc-----c
Confidence 99999999999999999997532100 00111222222222 222222111 11234444433221 1
Q ss_pred CCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchh--HHhHHHHHhCCeE
Q 007319 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP--VILFSSFLNGATL 425 (608)
Q Consensus 348 ~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~--~~~~~~l~~G~~~ 425 (608)
.......++++|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|.++. +.++.+++.|+++
T Consensus 176 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~ 255 (617)
T 3rg2_A 176 FTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTV 255 (617)
T ss_dssp CCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEE
T ss_pred cCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEE
Confidence 22334567999999999999999999999999999999888888999999999999998887765 3689999999999
Q ss_pred EEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcC--CCCCCccccEEEeecCCCChhhhHHHHhhccCCceecc
Q 007319 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (608)
Q Consensus 426 vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~ 503 (608)
++.+ ..++..+++.|+++++|++.++|+++..|++.... ...++++||.+++|||++++++.+++...++ ++++|.
T Consensus 256 v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~~~~ 333 (617)
T 3rg2_A 256 VLAA-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIG-CQLQQV 333 (617)
T ss_dssp EECS-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHHHHHHTC-SEEEEE
T ss_pred EEeC-CCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHHHHHHhC-CcEEEE
Confidence 9987 46888999999999999999999999999875332 2336899999999999999999998887764 789999
Q ss_pred ccccccccccccCCCCCCCccCccCcCC-CCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcccccc
Q 007319 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRG 581 (608)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~ 581 (608)
||+||+++.++...........++|+|+ ++++++|+|++|+++|.|++ |||+| +++...+ |+.+++.|++.|..
T Consensus 334 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~p~G~~--GEl~i~G~~v~~G--Y~~~p~~t~~~f~~ 409 (617)
T 3rg2_A 334 FGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEV--GRLMTRGPYTFRG--YYKSPQHNASAFDA 409 (617)
T ss_dssp EEETTEEEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCCTTCC--EEEEEECSSSCSC--CTTCHHHHHHHBCT
T ss_pred eccCcceeecccCCCcccccccCCCccCCCCceEEEECCCCCCCCCCCc--eEEEecCccccch--hcCChhhhhhccCC
Confidence 9999998654432222222346899998 78899999999999999995 99999 5554443 23367899999964
Q ss_pred CCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 582 MPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 582 ~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+ +||+|| ++++||+|+|+||+
T Consensus 410 ~------~~yrTGDl~~~~~dG~l~~~GR~ 433 (617)
T 3rg2_A 410 N------GFYCSGDLISIDPEGYITVQGRE 433 (617)
T ss_dssp T------SCEEEEEEEEECTTSCEEEEEEC
T ss_pred C------CceecCceEEEcCCceEEEEeec
Confidence 3 389999 99999999999995
No 16
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=3.7e-57 Score=493.51 Aligned_cols=387 Identities=19% Similarity=0.177 Sum_probs=307.7
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. +..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 a~~~p~~~a~~~~~~----~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 28 AALFGRKEVVSRLHT----GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp HHHSTTCEEEEECTT----SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHhCCCceEEEEecC----CCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEEecC
Confidence 367999999996322 1235899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCc-EEEEecCCCCCCCCCCCCCccHHHhhcccCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 343 (608)
|.++.+++.+++++++++++|+++... +....+....+.. .+++.. ... ......+++++.....
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~-- 169 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLL------PLVEAIRGELKTVQHFVVMD-EKA-----PEGYLAYEEALGEEAD-- 169 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH------HHHHHHGGGCSSCCEEEESS-SCC-----CTTCEEHHHHCCSCCC--
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHH------HHHHHHHhhCCCccEEEEec-CCC-----CcccccHHHHhhccCC--
Confidence 999999999999999999999987532 2222333333322 222211 110 0123456665543221
Q ss_pred CCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHh--hhhcCCCCCcEEEEeccccccchhHHhHHHHHh
Q 007319 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (608)
Q Consensus 344 ~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (608)
.....++++++|+|||||||+||||+++|+++++..... ...++++++|++++.+|++|+.++..++.+++.
T Consensus 170 ------~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (541)
T 1v25_A 170 ------PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLV 243 (541)
T ss_dssp ------CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTHHHHHHHH
T ss_pred ------cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHHHHHHHHhc
Confidence 123456899999999999999999999999988766542 345678899999999999999998778889999
Q ss_pred CCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCcee
Q 007319 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (608)
Q Consensus 422 G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~ 501 (608)
|+++++.+..+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++ ..+ +++++
T Consensus 244 G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~-~~~-g~~~~ 321 (541)
T 1v25_A 244 GAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSLIARF-ERM-GVEVR 321 (541)
T ss_dssp TCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHHHHHH-HHT-TCEEE
T ss_pred CceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHHHHHH-HHh-CCcee
Confidence 9999998755689999999999999999999999999987654444568899999999999999999888 454 58899
Q ss_pred ccccccccccccccCCCCC----------CCccCccCcCCCCcEEEEECCCCCcCCC-C-CCceeeEEE-ecccCCCccc
Q 007319 502 ESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDECGVPYPD-D-QPCVGEVGL-FPLYLGASDR 568 (608)
Q Consensus 502 ~~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~~~I~d~~g~~~p~-g-~~~~Gel~v-~~~~~~~~~~ 568 (608)
|.||+||++..++...... ....+++|+|++|++++|+|++|+++|. | + +|||+| +++.+.+ |
T Consensus 322 ~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~~~~~--~GEl~v~g~~v~~G--Y 397 (541)
T 1v25_A 322 QGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGRPVPKDGKA--LGEVQLKGPWITGG--Y 397 (541)
T ss_dssp EEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEECTTSCBCCSSSCC--CEEEEEESTTSBSS--C
T ss_pred ecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEEECCCCCCCCCCCCc--ceEEEEeCcchhcc--c
Confidence 9999999986544432210 0235789999999999999999999995 3 4 599999 6655543 2
Q ss_pred ccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 569 LLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 569 ~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.+++.|++.|.. +.||+|| ++|+||+|+|+||+
T Consensus 398 ~~~p~~t~~~f~~------~g~~~TGDlg~~d~dG~l~~~GR~ 434 (541)
T 1v25_A 398 YGNEEATRSALTP------DGFFRTGDIAVWDEEGYVEIKDRL 434 (541)
T ss_dssp BTCHHHHHTTBCT------TSCEEEEEEEEECTTCCEEEEEES
T ss_pred cCChhhhhhhccC------CCCeEcCCEEEEcCCceEEEeecc
Confidence 3367888888853 2399999 99999999999995
No 17
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=7.7e-58 Score=496.08 Aligned_cols=379 Identities=20% Similarity=0.163 Sum_probs=307.1
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++|+++|+++.+. .+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 26 a~~~p~~~A~~~~~~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 99 (517)
T 3r44_A 26 ATVSPRLQAYVEPST------DVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPIN 99 (517)
T ss_dssp HHHSTTSEEEEEGGG------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECC
T ss_pred HHhCCCCeEEEeCCc------CceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Confidence 478999999998644 24899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC--cEEEEecCCCCCCCCCCCCCccHHHhhcccCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (608)
|.++.+++.+++++++++++|++.... +....+...... ..+.+. ....+.+.......
T Consensus 100 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~- 160 (517)
T 3r44_A 100 TRLAAPEVSFILSDSGSKVVIYGAPSA------PVIDAIRAQADPPGTVTDWI------------GADSLAERLRSAAA- 160 (517)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGH------HHHHHHHHSSSCCTTCCEEE------------EHHHHHHHHHHCCC-
T ss_pred cccCHHHHHHHHHhcCceEEEECCchH------HHHHHHHhccCCccEEEEcc------------CcccHHHHhhccCc-
Confidence 999999999999999999999987532 222222221111 111110 01123343332221
Q ss_pred CCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhC
Q 007319 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (608)
Q Consensus 343 ~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (608)
........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.+++.|
T Consensus 161 ----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~~G 236 (517)
T 3r44_A 161 ----DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAMRG 236 (517)
T ss_dssp ----CCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHhcC
Confidence 1223345679999999999999999999999999999888888889999999999999999999997766666699
Q ss_pred CeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceec
Q 007319 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (608)
Q Consensus 423 ~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~ 502 (608)
+++++.+ .+++..+++.|+++++|++.++|++++.|.+.......++++||.+++|||++++++.+++... +++++|
T Consensus 237 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~ 313 (517)
T 3r44_A 237 VTLISMP-QFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQ 313 (517)
T ss_dssp CEEEECS-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEE
T ss_pred eEEEEeC-CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEE
Confidence 9999987 5789999999999999999999999999988755455678899999999999999999888876 589999
Q ss_pred cccccccccccccCCC-CCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccc
Q 007319 503 SCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFR 580 (608)
Q Consensus 503 ~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~ 580 (608)
.||+||+++..+.... ......+++|+|+++++++|+|++|++++.| . |||+| +++.+.+ |+.+++.|++.|.
T Consensus 314 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g-~--GEl~v~g~~v~~G--Y~~~p~~t~~~f~ 388 (517)
T 3r44_A 314 GYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRGDDGVIREHG-E--GEVVIKSDILLKE--YWNRPEATRDAFD 388 (517)
T ss_dssp EEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEECTTSCEESSE-E--EEEEEEETTSCSE--ETTCHHHHHHTEE
T ss_pred eecccccccceeecCCccccccCCCCCcCCCCeEEEEECCCCCCCCCC-C--eEEEEeCcchhhh--hCCChhhhHhhhc
Confidence 9999999865443322 2244568999999999999999999999998 3 99999 6655543 2336788888883
Q ss_pred cCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 581 GMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 581 ~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++||+|| ++|+||+|+|+||+
T Consensus 389 -------~g~~~TGDl~~~~~dG~l~~~GR~ 412 (517)
T 3r44_A 389 -------NGWFRTGDIGEIDDEGYLYIKDRL 412 (517)
T ss_dssp -------TTEEEEEEEEEECTTSCEEEEECG
T ss_pred -------CCCEecceeEEEcCCeeEEEecCC
Confidence 2499999 99999999999995
No 18
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=9.1e-58 Score=495.52 Aligned_cols=377 Identities=19% Similarity=0.220 Sum_probs=308.3
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++
T Consensus 11 a~~~p~~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vpl~ 82 (512)
T 3fce_A 11 AAETPDQTAFVWRDA--------KITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIPVD 82 (512)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHCCCceEEEeCCc--------eEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEeeC
Confidence 378999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
+.++.+++.+++++++++++|++...... .... .++. ...+.++......
T Consensus 83 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~------------~~~~--~~~~-------------~~~~~~~~~~~~~--- 132 (512)
T 3fce_A 83 LSIPADRVQRIAENSGAKLLLSATAVTVT------------DLPV--RIVS-------------EDNLKDIFFTHKG--- 132 (512)
T ss_dssp TTSCHHHHHHHHHHSCCCEEEESSCCCSS------------CCSS--EEEE-------------THHHHHHHHHTTT---
T ss_pred CCCcHHHHHHHHHhcCCCEEEecCccccc------------cccc--ceec-------------hhhhhhhcccccc---
Confidence 99999999999999999999998642100 0000 0110 0012222211111
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCe
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (608)
..........++|+++|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.+++.++.+++.|++
T Consensus 133 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 212 (512)
T 3fce_A 133 NTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGT 212 (512)
T ss_dssp CCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCE
T ss_pred cCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCE
Confidence 01112234567999999999999999999999999999988888888999999999999999999999889999999999
Q ss_pred EEEeCCC--CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceec
Q 007319 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (608)
Q Consensus 425 ~vl~~~~--~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~ 502 (608)
+++.+.. .++..+++.|+++++|++.++|+++..++........++++||.+++|||++++++.+++.+.+++++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~ 292 (512)
T 3fce_A 213 LWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMN 292 (512)
T ss_dssp EEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEE
T ss_pred EEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEe
Confidence 9998742 47889999999999999999999999998876666677899999999999999999999999987789999
Q ss_pred cccccccccccccCCCC----CCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhcc
Q 007319 503 SCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEV 577 (608)
Q Consensus 503 ~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~ 577 (608)
.||+||+++.++..... ......++|+|+++++++|+|++|+++|+|+. |||+| +++.+.+ |+.+++.|++
T Consensus 293 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t~~ 368 (512)
T 3fce_A 293 TYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMKEDGTIAPDGEK--GEIVIVGPSVSVG--YLGSPELTEK 368 (512)
T ss_dssp EECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEECSSSCBCCTTSC--EEEEEESTTSCSC--BTTCHHHHHH
T ss_pred CcccChhhhheeeEEeccccccccCCCccccccCCcEEEEECCCCCCCCCCCe--EEEEEeccccChh--hcCCchhhhh
Confidence 99999998754432221 12245789999999999999999999999995 99999 6655543 2336788888
Q ss_pred ccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 578 YFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 578 ~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
.|.. .++++||+|| ++ +||+|+|+||+
T Consensus 369 ~f~~---~~~~~~~~TGDlg~~-~dG~l~i~GR~ 398 (512)
T 3fce_A 369 AFTM---IDGERAYKTGDAGYV-ENGLLFYNGRL 398 (512)
T ss_dssp HEEE---ETTEEEEEEEEEEEE-ETTEEEEEEEG
T ss_pred cccc---CCCCEEEeCCceEEe-cCCEEEEeccc
Confidence 8852 2367899999 66 89999999995
No 19
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1.4e-57 Score=497.96 Aligned_cols=394 Identities=15% Similarity=0.130 Sum_probs=305.7
Q ss_pred CCCCCcEEEE---EecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEe
Q 007319 187 RKEDNTVAIV---WREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (608)
Q Consensus 187 ~~~pd~~Av~---~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vp 262 (608)
+++|+++|++ +... .+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|
T Consensus 31 ~~~p~~~a~~a~~~~~~------~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp 104 (550)
T 3rix_A 31 KRYALVPGTIAFTDAHI------EVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAP 104 (550)
T ss_dssp HHHHTSTTCEEEEETTT------CCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEE
T ss_pred HhCCCCceEEEeeecCC------CcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHHHHHcCCEEee
Confidence 6778888865 3221 13899999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCC
Q 007319 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (608)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (608)
+++.++.+++.+++++++++++|++++.. +....+....+....++...... ......++.++.......
T Consensus 105 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 174 (550)
T 3rix_A 105 ANDIYNERELLNSMNISQPTVVFVSKKGL------QKILNVQKKLPIIQKIIIMDSKT----DYQGFQSMYTFVTSHLPP 174 (550)
T ss_dssp CCTTCCHHHHHHHHHHHCCSEEEECGGGH------HHHHHHHHHCTTCCEEEETTCSS----CBTTBCBHHHHHHHHCCT
T ss_pred cCCcCCHHHHHHHHHhcCCeEEEEcHHHH------HHHHHHHhhCCCcceEEEEcCCc----cccCcccHHHHhhccccc
Confidence 99999999999999999999999997532 22333333343322222211110 012334566655433220
Q ss_pred CCC-CCC-CCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhh---cCCCCCcEEEEeccccccchhHHhHH
Q 007319 343 PRP-NYY-SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGDVYCWPTNLGWVMGPVILFS 417 (608)
Q Consensus 343 ~~~-~~~-~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (608)
... ... +.....++|+|+|+|||||||+||||+++|+++.+.+.+.... +++.++|++++.+|++|+.+++.++.
T Consensus 175 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~ 254 (550)
T 3rix_A 175 GFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLG 254 (550)
T ss_dssp TCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHH
T ss_pred cccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHH
Confidence 000 011 1122245789999999999999999999999998877666544 56889999999999999999988889
Q ss_pred HHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccC
Q 007319 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (608)
Q Consensus 418 ~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (608)
+++.|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++.+.++.
T Consensus 255 ~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~ 333 (550)
T 3rix_A 255 YLICGFRVVLMY-RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHL 333 (550)
T ss_dssp HHHHTCEEEECS-SCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCCCHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEeC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCCCHHHHHHHHHHcCC
Confidence 999999999986 5789999999999999999999999999998876666789999999999999999999999988774
Q ss_pred CceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCchhh
Q 007319 498 NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHE 575 (608)
Q Consensus 498 ~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t 575 (608)
..++|.||+||+++.++... ......+++|+|+++++++|+| ++|+++|.|+. |||+| +++.+.+ |+.+++.|
T Consensus 334 ~~v~~~YG~TE~~~~~~~~~-~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t 408 (550)
T 3rix_A 334 PGIRQGYGLTETTSAILITP-EGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQR--GELCVRGPMIMSG--YVNNPEAT 408 (550)
T ss_dssp SCCEEEEECGGGSSEEEECC-TTCCCTTEEEEECTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSE--ETTCHHHH
T ss_pred CccccccCcCccccceecCC-CCCCCCCCcccccCCcEEEEEeCCCCcCCCCCCC--eEEEEeCCCcchh--hcCChhhh
Confidence 45999999999987554433 3345678999999999999999 67999999995 99999 6655543 23366788
Q ss_pred ccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 576 EVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 576 ~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++.|.. +.||+|| ++|+||+|+|+||+
T Consensus 409 ~~~~~~------~g~~~TGDl~~~~~dG~l~~~GR~ 438 (550)
T 3rix_A 409 NALIDK------DGWLHSGDIAYWDEDEHFFIVDRL 438 (550)
T ss_dssp HHHBCT------TSCEEEEEEEEECTTCCEEEC---
T ss_pred hhhcCC------CCCeecCcEEEEeCCceEEEEecc
Confidence 888742 3499999 99999999999995
No 20
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.4e-56 Score=491.38 Aligned_cols=408 Identities=19% Similarity=0.239 Sum_probs=319.4
Q ss_pred CCcccCCCchhHhhhcccccc---cCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc--cCCCCEEEE
Q 007319 164 GGTWLPGSVLNIAECCLLPSN---HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAI 238 (608)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~~~---~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai 238 (608)
...|..+...|....++.+++ +|+++||++|+++.+.. +..+++||+||+++++++|++|++. +++||+|+|
T Consensus 28 ~~~~~~~~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~---g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i 104 (570)
T 3c5e_A 28 WGHQEVPAKFNFASDVLDHWADMEKAGKRPPSPALWWVNGK---GKELMWNFRELSENSQQAANVLSGACGLQRGDRVAV 104 (570)
T ss_dssp CCBCCCCSBCCHHHHTHHHHHHHHHTTSSCCCEEEEEECSS---SCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEE
T ss_pred cccccCCccccHHHHHHHHHHhhccccCCCCceEEEEEcCC---CceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEE
Confidence 445665666666656665543 12349999999985421 2235899999999999999999986 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC--cEEEEec
Q 007319 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPA 316 (608)
Q Consensus 239 ~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 316 (608)
+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++... +....+....+. .++++..
T Consensus 105 ~~~n~~e~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 178 (570)
T 3c5e_A 105 VLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVI------QEVDTVASECPSLRIKLLVSE 178 (570)
T ss_dssp ECCSCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTH------HHHHHHGGGCTTCCEEEEESS
T ss_pred EcCCCHHHHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHH------HHHHHHhhcCCceeEEEEecc
Confidence 99999999999999999999999999999999999999999999999987532 222222333332 2222321
Q ss_pred CCCCCCCCCCCCCccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHH--HHHHhhhhcCC
Q 007319 317 IGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDL 394 (608)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~--~~~~~~~~~~~ 394 (608)
.. ..+...+++++..... ........++|+|+|+|||||||.||||+++|+ ++. ..... ..+++
T Consensus 179 ~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~ 244 (570)
T 3c5e_A 179 KS-------CDGWLNFKKLLNEAST-----THHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGL 244 (570)
T ss_dssp SC-------CTTSEEHHHHHHHSCS-----CCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSC
T ss_pred cC-------ccccccHHHHhhcccc-----cccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCC
Confidence 10 1123456666544322 112234567999999999999999999999999 444 33333 66788
Q ss_pred CCCcEEEEeccccccchhH-HhHHHHHhCCeEEEeCC-CCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCcc
Q 007319 395 KVGDVYCWPTNLGWVMGPV-ILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (608)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~-~~~~~l~~G~~~vl~~~-~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~ 472 (608)
+++|++++.+|++|+.+++ .++.++..|+++++.+. .+++..+++.|+++++|++.++|++++.|.+.. ....++++
T Consensus 245 ~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~~~~ 323 (570)
T 3c5e_A 245 QASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYKFPH 323 (570)
T ss_dssp CTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCCCTT
T ss_pred CCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-cccccccc
Confidence 9999999999999999986 68899999999999864 568999999999999999999999999998763 33456899
Q ss_pred ccEEEeecCCCChhhhHHHHhhccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCc
Q 007319 473 IRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (608)
Q Consensus 473 Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~ 552 (608)
||.+++|||++++++.+++.+.+ +++++|.||+||+++.++.. .......+++|+|+++++++|+|++|+++|.|+.
T Consensus 324 lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~~~~~v~i~d~~g~~~~~G~~- 400 (570)
T 3c5e_A 324 LQNCVTVGESLLPETLENWRAQT-GLDIRESYGQTETGLTCMVS-KTMKIKPGYMGTAASCYDVQIIDDKGNVLPPGTE- 400 (570)
T ss_dssp CCEEEEESSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECC-TTSCCCTTCCCEECTTCCEEEECTTSCBCCTTCC-
T ss_pred ceEEEEcCCcCCHHHHHHHHHHh-CCchhhccchhhcccceecC-cccccCCCcccccCCCceEEEECCCCCCCCCCCC-
Confidence 99999999999999999888776 47899999999998654432 2223456899999999999999999999999995
Q ss_pred eeeEEEe------cccCCCcccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 553 VGEVGLF------PLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 553 ~Gel~v~------~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
|||+|. ++.+.+ |+.+++.|++.|. ++||+|| ++|+||+|+|+||+
T Consensus 401 -GEl~v~~~~~~g~~v~~G--Y~~~~~~t~~~f~-------~~~~~TGDlg~~d~dG~l~~~GR~ 455 (570)
T 3c5e_A 401 -GDIGIRVKPIRPIGIFSG--YVDNPDKTAANIR-------GDFWLLGDRGIKDEDGYFQFMGRA 455 (570)
T ss_dssp -EEEEEECSSBCCTTCCCE--ETTCHHHHHHTEE-------TTEEEEEEEEEECTTSCEEEEEEG
T ss_pred -CeeEEeccCCCCchhhcc--ccCChhHhhhhhc-------CCccccceeEEEcCCceEEEEecC
Confidence 999993 333332 2335678888884 2399999 99999999999995
No 21
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1.2e-57 Score=490.98 Aligned_cols=384 Identities=15% Similarity=0.112 Sum_probs=295.9
Q ss_pred CCCCCCcEEEEEecCC-CCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEec
Q 007319 186 RRKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl 263 (608)
++++||++|+++.+.. ...+.++++||+||+++++++|++|+++ + +||+|+|+++|++++++++|||+++|++++|+
T Consensus 34 a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 34 ARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFLGALQAGRIAVPL 112 (480)
T ss_dssp HHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHHHHHHhCcEEEee
Confidence 4789999999987621 1223446999999999999999999999 8 99999999999999999999999999999999
Q ss_pred CC---CCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCC-----cEEEEecCCCCCCCCCCCCCccHHHh
Q 007319 264 AD---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-----KAIVLPAIGNDVGIPLREQDLSWKDF 335 (608)
Q Consensus 264 ~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 335 (608)
++ .++.+++.+++++++++++|+++... ..+.+.... ...++. ++.+
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~----------------~~~~ 167 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAV---------DDVVQHVARRPGESPPSIIE----------------VDLL 167 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTH---------HHHHHTCC------CCEEEE----------------GGGS
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHH---------HHHHHHHhccccccccceeE----------------eccc
Confidence 99 78899999999999999999997532 222211110 001111 1111
Q ss_pred hcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCC------CcEEEEecccccc
Q 007319 336 LSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV------GDVYCWPTNLGWV 409 (608)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~------~d~~l~~~~~~~~ 409 (608)
.... ..........++++|+|+|||||||+||||+++|+++.+.+.+....+++.. +|++++.+|++|+
T Consensus 168 ~~~~-----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 242 (480)
T 3t5a_A 168 DLDA-----PNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHD 242 (480)
T ss_dssp CTTC-----C---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTST
T ss_pred cccc-----ccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCc
Confidence 0000 0112233456789999999999999999999999999988888777777777 9999999999999
Q ss_pred chh-HHhHHHHHhCCeEEEeCCC---CChhhHHHHHHHhCCcEEEecHHHHHHHHhc----CcCCCCCCccccEEEeecC
Q 007319 410 MGP-VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNT----NCLEGLDWTKIRSFASTGE 481 (608)
Q Consensus 410 ~~~-~~~~~~l~~G~~~vl~~~~---~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~----~~~~~~~l~~Lr~i~~gGe 481 (608)
+++ +.++.+|+.|+++++.+.. .++..+++.|+++++| +..+|+++..++.. ......++++||.+++|||
T Consensus 243 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~~lr~i~~gG~ 321 (480)
T 3t5a_A 243 MGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLGNILTILSGSE 321 (480)
T ss_dssp THHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCTTCCEEEECCT
T ss_pred cHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchhhhheeeecCC
Confidence 996 5689999999999998632 3788999999999999 88999998888753 2334567899999999999
Q ss_pred CCChhhhHHHHhhcc-----CCceeccccccccccccccCCCCC------------------------CCccCccCcCCC
Q 007319 482 TSNVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQ------------------------PQAFGAFSTATM 532 (608)
Q Consensus 482 ~l~~~~~~~~~~~~~-----~~~i~~~YG~TE~~~~~~~~~~~~------------------------~~~~~~iG~p~~ 532 (608)
++++++.+++.+.++ +++++|.||+||+++.++...... ....+++|+|++
T Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~ 401 (480)
T 3t5a_A 322 RVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS 401 (480)
T ss_dssp TCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS
T ss_pred cCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC
Confidence 999999999988763 357999999999987655433221 123468999999
Q ss_pred CcEEEEECCC-CCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccccCC-----CCCCCeEeeee---EEcCCCeE
Q 007319 533 TAGLVILDEC-GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMP-----MYKGMEAWRHH---QADCRGLY 602 (608)
Q Consensus 533 ~~~~~I~d~~-g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p-----~~~~~~~~~TG---~~~~dG~l 602 (608)
++++|+|++ |+++|.|++ |||+| +++.+.+ |+.+++.|++.|..++ ..++++||+|| ++| ||+|
T Consensus 402 -~~~~ivd~~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~d-dG~l 475 (480)
T 3t5a_A 402 -PIVRIVDSDTCIECPDGTV--GEIWVHGDNVANG--YWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVT-DGKM 475 (480)
T ss_dssp -SEEEEEETTTTEECCTTBC--EEEEEESTTSCCC--BTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEE-TTEE
T ss_pred -CEEEEEcCCCCcCCCCCCE--EEEEEeCCccccc--cccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEE-CCEE
Confidence 999999966 899999995 99999 6665553 2336788999886332 22356799999 886 9999
Q ss_pred EEEcC
Q 007319 603 HCTGK 607 (608)
Q Consensus 603 ~~~GR 607 (608)
+|+||
T Consensus 476 ~~~GR 480 (480)
T 3t5a_A 476 FIIGR 480 (480)
T ss_dssp EECC-
T ss_pred EEeCC
Confidence 99999
No 22
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.3e-56 Score=489.80 Aligned_cols=387 Identities=18% Similarity=0.125 Sum_probs=309.1
Q ss_pred CCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCC
Q 007319 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (608)
Q Consensus 187 ~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~ 265 (608)
+++ |++|+++.+.+ +++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++
T Consensus 37 ~~~-~~~A~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~ 109 (548)
T 2d1s_A 37 AKL-GAIAFTNAVTG------VDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNE 109 (548)
T ss_dssp HHH-TCEEEEETTTC------CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCEEEEECT
T ss_pred ccc-CCceEEEcCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCEEeccCC
Confidence 567 99999974211 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCC-CcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
.++.+++.+++++++++++|+++... +.+..+....+ ...++. ..... ...+...|+++...... .
T Consensus 110 ~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~--~ 176 (548)
T 2d1s_A 110 IYTLRELVHSLGISKPTIVFSSKKGL------DKVITVQKTVTTIKTIVI-LDSKV----DYRGYQCLDTFIKRNTP--P 176 (548)
T ss_dssp TSCHHHHHHHHHHHCCSEEEECTTTH------HHHHHHHHHSTTCCEEEE-TTCSS----CBTTBCBHHHHHHHTSC--T
T ss_pred CCCHHHHHHHHHhcCCeEEEEcHHHH------HHHHHHhcCCCCCCEEEE-eCCcc----cccccccHHHHHhcCcc--c
Confidence 99999999999999999999987532 22222222333 122222 11110 00122346666554321 0
Q ss_pred CCCCCCCcC------CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhh---cCCCCCcEEEEeccccccchhHH-
Q 007319 345 PNYYSPVYN------PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH---IDLKVGDVYCWPTNLGWVMGPVI- 414 (608)
Q Consensus 345 ~~~~~~~~~------~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~- 414 (608)
....... .++|+|+|+|||||||+||||+++|+++.+.+.+.... ++++++|++++.+|++|+.++..
T Consensus 177 --~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 254 (548)
T 2d1s_A 177 --GFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTT 254 (548)
T ss_dssp --TCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHH
T ss_pred --cCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHH
Confidence 0111111 23899999999999999999999999998887776655 67889999999999999999865
Q ss_pred hHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhh
Q 007319 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (608)
Q Consensus 415 ~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~ 494 (608)
++.++ .|+++++.+ .+++..+++.|+++++|++.++|+++..|.+.......++++||.+++|||++++++.+++.+.
T Consensus 255 ~~~~l-~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~~~~~~ 332 (548)
T 2d1s_A 255 LGYLI-CGFRVVMLT-KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGEAVARR 332 (548)
T ss_dssp HHHHH-TTCEEEECC-CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHHHHHHH
T ss_pred HHHHh-cCcEEEEcC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHHHHHHH
Confidence 55666 999999987 5789999999999999999999999999998765555678999999999999999999999988
Q ss_pred ccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEE-ecccCCCcccccCc
Q 007319 495 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNA 572 (608)
Q Consensus 495 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~ 572 (608)
+++.+++|.||+||+++.++.. .......+++|+|+++++++|+| ++|+++|+|+. |||+| +++.+.+ |+.++
T Consensus 333 ~~~~~i~~~YG~TE~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~~ 407 (548)
T 2d1s_A 333 FNLPGVRQGYGLTETTSAIIIT-PEGDDKPGASGKVVPLFKAKVIDLDTKKSLGPNRR--GEVCVKGPMLMKG--YVNNP 407 (548)
T ss_dssp TTCSCCEEEEECGGGSSEEEEC-CTTCCCTTCCBEECTTCEEEEECTTTCCBCCTTCC--EEEEEESTTSCSE--ETTCH
T ss_pred cCCCceeeccccccccceeeec-CcccCCCCCCCccCCCceEEEEeCCcCccCCCCCC--eEEEECCHHHhhh--hcCCh
Confidence 8778899999999998754442 22334568999999999999999 78999999995 99999 6555443 22366
Q ss_pred hhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 573 DHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 573 ~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.|++.|.. +.||+|| ++|+||+|+|+||+
T Consensus 408 ~~t~~~f~~------~g~~~TGDl~~~~~dG~l~~~GR~ 440 (548)
T 2d1s_A 408 EATKELIDE------EGWLHTGDIGYYDEEKHFFIVDRL 440 (548)
T ss_dssp HHHHHHBCT------TSCEEEEEEEEECTTCCEEEEEEG
T ss_pred HHhhhcccC------CcEEEccCEEEEcCCCeEEEeccc
Confidence 788888842 3489999 99999999999995
No 23
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=2e-56 Score=486.94 Aligned_cols=396 Identities=20% Similarity=0.191 Sum_probs=306.5
Q ss_pred hhHhhhcccccccCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHH
Q 007319 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (608)
Q Consensus 173 ~~~~~~~l~~~~~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~l 251 (608)
+|.....+..++ + +||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|
T Consensus 23 ~~~~~~~l~~~~--~-~p~~~A~~~~~~--------~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~l 91 (529)
T 2v7b_A 23 FNFAAYLFRLNE--T-RAGKTAYIDDTG--------STTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFL 91 (529)
T ss_dssp CCHHHHHHHHTG--G-GTTSEEEECSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHH
T ss_pred eeHHHHHHHhhh--c-cCCceEEEeCCC--------CccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 344444454444 6 999999998765 999999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCC---CcEEEEecCCCCCCCCCCCC
Q 007319 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---LKAIVLPAIGNDVGIPLREQ 328 (608)
Q Consensus 252 A~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 328 (608)
||+++|++++|+++.++.+++.+++++++++++|+++... +.......... ..++++...... ...
T Consensus 92 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 160 (529)
T 2v7b_A 92 GALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALV------QNVTQALESAEHDGCQLIVSQPRESE-----PRL 160 (529)
T ss_dssp HHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGH------HHHHHHHHCC---CCEEEEECC-----------C
T ss_pred HHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhh------hHHHHHHhhccccCceEEEecccccc-----ccc
Confidence 9999999999999999999999999999999999987532 11222222111 122222211000 001
Q ss_pred CccHHHhhcccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchh-HHHHHHhhhhcCCCCCcEEEEecccc
Q 007319 329 DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSS-IRCTAEGWAHIDLKVGDVYCWPTNLG 407 (608)
Q Consensus 329 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~-~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (608)
...++++...... ........++|+++|+|||||||+||||+++|+++ .+........++++++|++++..|++
T Consensus 161 ~~~~~~~~~~~~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~ 235 (529)
T 2v7b_A 161 APLFEELIDAAAP-----AAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLF 235 (529)
T ss_dssp CCBHHHHHHTSCC-----CSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTT
T ss_pred ccchhhhhccCCC-----cccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHH
Confidence 2246666543221 11223456799999999999999999999999998 56655555567889999999999999
Q ss_pred ccchhH-HhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChh
Q 007319 408 WVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (608)
Q Consensus 408 ~~~~~~-~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~ 486 (608)
|+.++. .++.++..|+++++.+..+++..+++.|+++++|++.++|+++..|++..........+||.+++|||+++++
T Consensus 236 ~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~ 315 (529)
T 2v7b_A 236 FAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPRE 315 (529)
T ss_dssp SHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHH
T ss_pred HHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHH
Confidence 999985 4678999999999986567899999999999999999999999999876533322123899999999999999
Q ss_pred hhHHHHhhccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCC
Q 007319 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGA 565 (608)
Q Consensus 487 ~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~ 565 (608)
+.+++.+.+ +++++|.||+||++..++.... .....+++|+|++|++++|+|++|+++|.|+. |||+| +++.+.+
T Consensus 316 ~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~~~~g 391 (529)
T 2v7b_A 316 IGERFTAHF-GCEILDGIGSTEMLHIFLSNRA-GAVEYGTTGRPVPGYEIELRDEAGHAVPDGEV--GDLYIKGPSAAVM 391 (529)
T ss_dssp HHHHHHHHH-SCCEEEEEECTTTSSEEEECCT-TCCCTTSCCEECTTCEEEEECTTSCBCCTTSC--EEEEEECTTCCCC
T ss_pred HHHHHHHHh-CCceeeeEchhhcCceeecccc-CCCccCCcccCCCCCEEEEECCCCCCCCCCCc--cEEEEecCCcccc
Confidence 999988776 4889999999999654443322 22456789999999999999999999999995 99999 6655543
Q ss_pred cccccCchhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 566 SDRLLNADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 566 ~~~~~~~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
|+.+++.|++.|. ++||+|| ++|+||+|+|+||+
T Consensus 392 --Y~~~~~~t~~~f~-------~~~~~TGDl~~~~~~G~l~~~GR~ 428 (529)
T 2v7b_A 392 --YWNNREKSRATFL-------GEWIRSGDKYCRLPNGCYVYAGRS 428 (529)
T ss_dssp --BTTCHHHHHHHEE-------TTEEEEEEEEEECTTSCEEEEEEG
T ss_pred --cCCChHHHHHhhh-------cCCcccCceEEECCCccEEEeCcc
Confidence 2336778888885 2399999 99999999999995
No 24
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=1e-56 Score=486.80 Aligned_cols=377 Identities=14% Similarity=0.077 Sum_probs=303.4
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. ++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 16 a~~~pd~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl~ 87 (509)
T 3ivr_A 16 AALFPDRTAFMVDGV--------RLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAILLPVN 87 (509)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHCCCceEEEECCc--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Confidence 478999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
|.++.+++.+++++++++++|++.... +.........+....++.... ....+.++......
T Consensus 88 ~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--- 149 (509)
T 3ivr_A 88 YRLNADEIAFVLGDGAPSVVVAGTDYR------DIVAGVLPSLGGVKKAYAIGD---------GSGPFAPFKDLASD--- 149 (509)
T ss_dssp TTSCHHHHHHHHHHHCEEEEEECSTTH------HHHHHHGGGCSSCCEEEESSC---------CCSSCEEGGGTCCC---
T ss_pred CCCCHHHHHHHHHhcCceEEEECcchh------hhHHhhhcccCCceEEEEcCC---------CCcChhhHhhccCC---
Confidence 999999999999999999999987532 111122222222222221111 11122233221111
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCe
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (608)
.........++|+++|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.+++.|++
T Consensus 150 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~ 228 (509)
T 3ivr_A 150 -TPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGA 228 (509)
T ss_dssp -SCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCE
T ss_pred -CCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCc
Confidence 1122345567999999999999999999999999999998888888999999999999999999999877777777777
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceeccc
Q 007319 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (608)
Q Consensus 425 ~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~Y 504 (608)
.++.. .+++..+++.|+++++|++.++|+++..|++.. ...+++++|.++.+|++ +..+++...+++++++|.|
T Consensus 229 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~Y 302 (509)
T 3ivr_A 229 SVIAA-KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQLASLRAVTGLDTP---ETIERFEATCPNATFWATF 302 (509)
T ss_dssp EEECS-SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEE
T ss_pred EEEec-ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccchhhhheecccCCh---HHHHHHHHhcCCCeEEccc
Confidence 77776 678999999999999999999999999998875 34567899999999986 7777788888778999999
Q ss_pred cccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccccCC
Q 007319 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMP 583 (608)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p 583 (608)
|+||+++.++..... ....++|+|++|++++|+|++|+++|+|+. |||+| +++.+.+ |+.+++.|++.|.
T Consensus 303 G~TE~~~~~~~~~~~--~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~g--Y~~~~~~t~~~f~--- 373 (509)
T 3ivr_A 303 GQSETSGLSTFAPYR--DRPKSAGRPLFWRTVAVVDAEDRPLPPGEV--GEIVLRGPTVFKG--YWNNAAATQHAFR--- 373 (509)
T ss_dssp EEGGGTEEEEEEEGG--GSTTSCCEECTTCEEEEECTTSCBCCTTCC--EEEEEESTTSCCE--ETTCHHHHHHHTG---
T ss_pred CccccccccccCccc--cCCCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEecCCcccc--ccCCHHHhHHHhh---
Confidence 999998754443222 223469999999999999999999999995 99999 6555543 2336778888884
Q ss_pred CCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 584 MYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 584 ~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++||+|| ++|+||+|+|+||+
T Consensus 374 ----~g~~~TGDl~~~~~dG~l~~~GR~ 397 (509)
T 3ivr_A 374 ----NGWHHTGDMGRFDADGYLFYAGRA 397 (509)
T ss_dssp ----GGSEEEEEEEEECTTSCEEEEEEC
T ss_pred ----cCCcccccEEEECCCceEEEeCCC
Confidence 2489999 99999999999995
No 25
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=6.9e-57 Score=489.79 Aligned_cols=376 Identities=15% Similarity=0.103 Sum_probs=306.6
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.++ ++||+||+++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 14 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~vpl~ 85 (521)
T 3l8c_A 14 AQTQADFPVYDCLGE--------RRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVD 85 (521)
T ss_dssp HHHSTTSEEEEETTE--------EEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHCCCCcceecCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEecC
Confidence 378999999998777 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
+.++.+++.+++++++++++|++++...... .. . ...+.++...... .
T Consensus 86 ~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~-------------~~-~----------------~~~~~~~~~~~~~--~ 133 (521)
T 3l8c_A 86 VHSAPERILAIIEIAKPSLIIAIEEFPLTIE-------------GI-S----------------LVSLSEIESAKLA--E 133 (521)
T ss_dssp TTSCHHHHHHHHHHSCCSEEEESSCCCSCCT-------------TS-E----------------EEEHHHHHHHHHH--T
T ss_pred ccccHHHHHHHHHhCCCCEEEecCccccccc-------------cC-c----------------ccchhhhhhcccc--c
Confidence 9999999999999999999999875421100 00 0 0112222111000 0
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhh--cCCCCCcEEEEeccccccchhHHhHHHHHhC
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (608)
..........++|+++|+|||||||.||||+++|+++.+.+.+.... +++.+++++++..|++|+.+...++.+++.|
T Consensus 134 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G 213 (521)
T 3l8c_A 134 MPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMYWAPTLALG 213 (521)
T ss_dssp CCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHHHHHHHHTT
T ss_pred CCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHHHHHHHhcC
Confidence 00112234567999999999999999999999999998877766554 6788999999999999999988888999999
Q ss_pred CeEEEeCCC--CChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCce
Q 007319 423 ATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (608)
Q Consensus 423 ~~~vl~~~~--~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i 500 (608)
+++++.+.. .++..+++.|.++++|++.++|+++..+.........++++||.+++||+++++++.+++.+.++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i 293 (521)
T 3l8c_A 214 GTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKI 293 (521)
T ss_dssp CEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEE
T ss_pred CEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHCCCceE
Confidence 999998742 377899999999999999999999999988766566778999999999999999999999988877899
Q ss_pred eccccccccccccccCCCC----CCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhh
Q 007319 501 IESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHE 575 (608)
Q Consensus 501 ~~~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t 575 (608)
+|.||+||+++.++..... .....+++|+|++|++++|+|++|+++|.|+. |||+| +++.+.+ |+.+++.|
T Consensus 294 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~g~~--GEl~v~g~~v~~G--Y~~~~~~t 369 (521)
T 3l8c_A 294 INAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDEDGKELSSGEQ--GEIIVTGPAVSKG--YLNNPEKT 369 (521)
T ss_dssp EEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECTTSCBCCTTCC--EEEEEESTTSCSC--BTTCHHHH
T ss_pred EeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEECCCcCCCCCCCc--eEEEecccccChh--hcCCchHh
Confidence 9999999998754432211 11245689999999999999999999999995 99999 6655543 23367888
Q ss_pred ccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 576 EVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 576 ~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++.|... ++++||+|| ++|+||+|+|+||+
T Consensus 370 ~~~f~~~---~~~~~~~TGDlg~~d~dG~l~~~GR~ 402 (521)
T 3l8c_A 370 AEAFFTF---KGQPAYHTGDIGSLTEDNILLYGGRL 402 (521)
T ss_dssp HHHEEEE---TTEEEEEEEEEEEECSSSCEEEEEEG
T ss_pred hccCcCC---CCceeeeCCCEEEEeCCCeEEEeCcc
Confidence 8888532 356799999 99999999999995
No 26
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.1e-55 Score=477.93 Aligned_cols=374 Identities=16% Similarity=0.095 Sum_probs=296.1
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+.+ +++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 12 a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 85 (504)
T 1t5h_X 12 ATRAPDHCALAVPARG------LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLN 85 (504)
T ss_dssp HHHCTTSEEEEETTTT------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHhCCCceEEEEcCCC------ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecC
Confidence 3689999999986211 3899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEe--ecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFT--QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (608)
+.++.+++.+++++++++++|+ ++.. ...+........ ++ .++++.......
T Consensus 86 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~-~~----------------~~~~~~~~~~~~ 139 (504)
T 1t5h_X 86 PRLKSAELAELIKRGEMTAAVIAVGRQV---------ADAIFQSGSGAR-II----------------FLGDLVRDGEPY 139 (504)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEECC--CH---------HHHHHHHCCCCE-EE----------------EGGGTEETTEEC
T ss_pred CccChHHHHHHHhhcCCcEEEEecchhh---------hhhhhhccccce-eE----------------EecchhhcCccc
Confidence 9999999999999999999999 5432 112212111111 11 122332221000
Q ss_pred CCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCC--CCCcEEEEeccccccchh-HHhHHHH
Q 007319 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL--KVGDVYCWPTNLGWVMGP-VILFSSF 419 (608)
Q Consensus 343 ~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~--~~~d~~l~~~~~~~~~~~-~~~~~~l 419 (608)
............++|+|+|+|||||||+||||+++|+++.+.+.+....+++ .++|++++.+|++|+.++ ..++.++
T Consensus 140 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l 219 (504)
T 1t5h_X 140 SYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAAL 219 (504)
T ss_dssp CCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHH
T ss_pred ccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHH
Confidence 0000111133467899999999999999999999999999888777777788 889999999999999997 5688999
Q ss_pred HhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcC-c-CCCCCCccccEEEeecCCCChhhhHHHHhhccC
Q 007319 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN-C-LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (608)
Q Consensus 420 ~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~-~-~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (608)
+.|+++++.+ .+++..+++.|+++++|+++++|+++..|.+.. . ....++++||.+++|||++++++.+++.+.++
T Consensus 220 ~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~- 297 (504)
T 1t5h_X 220 ALDGTYVVVE-EFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLP- 297 (504)
T ss_dssp HTTCEEEECS-SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHHHCC-
T ss_pred HcCceEEeCC-CCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHHhcC-
Confidence 9999999987 578899999999999999999999999998764 2 23456899999999999999999999988875
Q ss_pred CceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCC---CcCCCCCCceeeEEEe--cccCCCcccccCc
Q 007319 498 NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECG---VPYPDDQPCVGEVGLF--PLYLGASDRLLNA 572 (608)
Q Consensus 498 ~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g---~~~p~g~~~~Gel~v~--~~~~~~~~~~~~~ 572 (608)
.+++|.||+||+++. .... ....+++|+|+++++++|+|+++ +++|.|+. |||+|. ++.+.+ |+.++
T Consensus 298 ~~~~~~YG~TE~~~~-~~~~---~~~~~~~g~p~~~~~~~i~~~~~~~~~~~~~g~~--GEl~v~gg~~~~~G--Y~~~~ 369 (504)
T 1t5h_X 298 GEKVNIYGTTEAMNS-LYMR---QPKTGTEMAPGFFSEVRIVRIGGGVDEIVANGEE--GELIVAASDSAFVG--YLNQP 369 (504)
T ss_dssp SEEEEEEEETTTEEE-EEEE---SCSSSSEEBCCTTCCEEEECTTSCTTCBCCTTCC--EEEEEECCTTSCCC--BTTCH
T ss_pred cceeeeecccccccc-cccc---CCCCCccccCCCCCceeEEeccCCCCCcCCCCCc--ceEEEeCCceeece--ecCCc
Confidence 789999999999432 2211 23467899999999999999888 99999995 999994 333332 23367
Q ss_pred hhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 573 DHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 573 ~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.|++.|. + .||+|| ++|+||+|+|+||+
T Consensus 370 ~~t~~~f~-~------g~~~TGDlg~~~~dG~l~~~GR~ 401 (504)
T 1t5h_X 370 QATAEKLQ-D------GWYRTSDVAVWTPEGTVRILGRV 401 (504)
T ss_dssp HHHHHHEE-T------TEEEEEEEEEECTTSCEEEEEEG
T ss_pred hhhhhhhc-C------CccccCcEEEECCCceEEEeCcc
Confidence 78888883 1 299999 99999999999995
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=1.2e-54 Score=479.66 Aligned_cols=385 Identities=14% Similarity=0.096 Sum_probs=303.0
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++||++|+++.+. +..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 21 a~~~p~~~a~~~~~~----~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 96 (590)
T 3kxw_A 21 ALHSPNKKSCTFLNK----ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLYAGCIAVPIY 96 (590)
T ss_dssp HHHCTTSEEEEEEET----TEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCCeEEEEEcC----CeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHHhCcEEEEec
Confidence 478999999998642 2335999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCC---CHHHHHHHHHhcCceEEEeecceeecCcccCchHhHh-hhCCC--cEEEEecCCCCCCCCCCCCCccHHHhhcc
Q 007319 265 DSF---AAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (608)
Q Consensus 265 ~~~---~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 338 (608)
|.+ +.+++.++++++++++++++.+.... ..... ...+. ....+. .+++...
T Consensus 97 ~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~------~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 154 (590)
T 3kxw_A 97 PPAQEKLLDKAQRIVTNSKPVIVLMIADHIKK------FTADELNTNPKFLKIPAIA----------------LESIELN 154 (590)
T ss_dssp CCCSHHHHHHHHHHHHHHCCSEEEECHHHHHH------HCC-----CCEETTEEEEE----------------GGGCCGG
T ss_pred CCCchHHHHHHHHHHHhCCCCEEEeCHHHHHH------HHHhhhhhcccccccceee----------------chhcccc
Confidence 988 45789999999999999998753210 00000 00000 011111 1111110
Q ss_pred cCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHH-hHH
Q 007319 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFS 417 (608)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~ 417 (608)
.. .........++|+|+|+|||||||+||||+++|+++++.+.+....++++++|++++++|++|++++.. ++.
T Consensus 155 ~~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~ 229 (590)
T 3kxw_A 155 RS-----SSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILT 229 (590)
T ss_dssp GG-----GGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHH
T ss_pred cc-----ccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHH
Confidence 00 011223456799999999999999999999999999999988888899999999999999999999865 889
Q ss_pred HHHhCCeEEEeCCCC---ChhhHHHHHHHhCCcEEEecHHHHHHHHhc---CcCCCCCCccccEEEeecCCCChhhhHHH
Q 007319 418 SFLNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAWRNT---NCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (608)
Q Consensus 418 ~l~~G~~~vl~~~~~---~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~---~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~ 491 (608)
+++.|+++++.+... ++..+++.|+++++|++.++|+++..+.+. ......++++||.+++||+++++++.+++
T Consensus 230 ~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 309 (590)
T 3kxw_A 230 PIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPVREETMEHF 309 (590)
T ss_dssp HHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCCCHHHHHHH
T ss_pred HHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCCCHHHHHHH
Confidence 999999999986321 678999999999999999999999998775 22345678999999999999999999988
Q ss_pred Hhhcc-----CCceeccccccccccccccCCCC--------------------------CCCccCccCcCCCCcEEEEEC
Q 007319 492 SSKAW-----YNAIIESCGGTELSSAYIQGSLL--------------------------QPQAFGAFSTATMTAGLVILD 540 (608)
Q Consensus 492 ~~~~~-----~~~i~~~YG~TE~~~~~~~~~~~--------------------------~~~~~~~iG~p~~~~~~~I~d 540 (608)
.+.++ +.+++|.||+||+++.++..... .....+++|+|+++ ++|+|
T Consensus 310 ~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d 387 (590)
T 3kxw_A 310 YQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID 387 (590)
T ss_dssp HHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC
T ss_pred HHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc
Confidence 87763 34799999999998765432211 11234689999998 88999
Q ss_pred CC-CCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccccCCCCC--CCeEeeee---EEcCCCeEEEEcCC
Q 007319 541 EC-GVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGMPMYK--GMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 541 ~~-g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~p~~~--~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++ ++++|.|+. |||+| +++.+.+ |+.+++.|++.|..++... |.+||+|| ++| ||+|+|+||+
T Consensus 388 ~~~~~~~~~g~~--GEl~v~g~~v~~G--Y~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~l~~~GR~ 457 (590)
T 3kxw_A 388 PDTLIPCDFDQV--GEIWVQSNSVAKG--YWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENELYVTGRI 457 (590)
T ss_dssp TTTCCBCCTTBC--EEEEEESTTSCCC--BTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-TTEEEEEEES
T ss_pred CCCCcCCCCCCE--EEEEEeCCccccc--ccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-CCEEEEEcCc
Confidence 76 999999995 99999 6655553 3336788999997655432 45699999 888 9999999995
No 28
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=1.6e-54 Score=475.46 Aligned_cols=380 Identities=19% Similarity=0.186 Sum_probs=292.5
Q ss_pred CCCCCCcEEEEEecC--CCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEe
Q 007319 186 RRKEDNTVAIVWRED--RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (608)
Q Consensus 186 a~~~pd~~Av~~~~~--~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vp 262 (608)
|+++||++|+++.+. +......+++||+||+++++++|++|++. + +||+|+|+++|++++++++|||+|+|++++|
T Consensus 30 a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~~~lA~~~~Gav~vp 108 (562)
T 3ite_A 30 AKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFAIIVGIMKSGNTYVP 108 (562)
T ss_dssp HHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 478999999997652 01112335899999999999999999999 8 7999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCC
Q 007319 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (608)
Q Consensus 263 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (608)
+++.++.+++.+++++++++++|+++...... .......++.. ....+.+.......
T Consensus 109 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~~~-----------~~~~~~~~~~~~~~- 165 (562)
T 3ite_A 109 IEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGV-----------ELPPETKVLDT-----------KNQSFIENLSTQDT- 165 (562)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEECTTTTTTC-----------CCCTTCEEEET-----------TCHHHHHHHHHSCC-
T ss_pred cCCcCHHHHHHHHHHhcCCCEEEEcccccccc-----------ccCccceeecc-----------cchhhhhhcccccc-
Confidence 99999999999999999999999986432100 00111111111 11122232222211
Q ss_pred CCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhh--------hcCCCCCcEEEEeccccccchhHH
Q 007319 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA--------HIDLKVGDVYCWPTNLGWVMGPVI 414 (608)
Q Consensus 343 ~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~--------~~~~~~~d~~l~~~~~~~~~~~~~ 414 (608)
........++++|+|+|||||||+||||+++|+++.+.+..... .+.+...+++++..+++|+.++..
T Consensus 166 ----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (562)
T 3ite_A 166 ----SDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGE 241 (562)
T ss_dssp ----SCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHH
T ss_pred ----cccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHH
Confidence 11123345688999999999999999999999999876655433 245788899999999999999888
Q ss_pred hHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhh
Q 007319 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (608)
Q Consensus 415 ~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~ 494 (608)
++.++..|+++++.+....+..+.+.++++++|++.++|++++.+... ..++++||.+++||+++++++.+++.+.
T Consensus 242 ~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 317 (562)
T 3ite_A 242 MFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDAPHLVYLGVGGEKMTPRTQQIWSSS 317 (562)
T ss_dssp HHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGSTTCCEEEEESSCCCHHHHHHHTTC
T ss_pred HHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----ccccCceEEEEEecCCCCHHHHHHHhhC
Confidence 999999999999876322356788999999999999999999887543 2357899999999999999999888765
Q ss_pred ccCCceeccccccccccccccCCCCCCCccCccCcCCCCcEEEEECC-CCCcCCCCCCceeeEEE-ecccCCCccccc-C
Q 007319 495 AWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-FPLYLGASDRLL-N 571 (608)
Q Consensus 495 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~-~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~-~ 571 (608)
+ +++++|.||+||+++.++...........++|+|+++++++|+|+ .++++|+|+. |||+| +++.+.+ |+ +
T Consensus 318 ~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~~--GEl~v~g~~v~~G---Y~~~ 391 (562)
T 3ite_A 318 D-RVALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHVKKGMA--GELVIEGSLVANG---YLNR 391 (562)
T ss_dssp S-SCEEEEEECCGGGCSCSEEEECCTTSCTTEEEEECTTCEEEEECTTSSCBCCTTSC--EEEEEESTTSCCE---ESSC
T ss_pred C-CcEEEEeeccchheeeeeeeeecCCCCCccccccCCCCeEEEEeCCCCCCCCCCCc--eEEEEeccccchh---hCCC
Confidence 4 488999999999987555443334445678999999999999994 6889999995 99999 6655543 33 4
Q ss_pred chhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 572 ADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 572 ~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++.|+..+. .|++||+|| ++|+||+|+|+||+
T Consensus 392 p~~t~~~~~-----~g~~w~~TGDlg~~d~dG~l~~~GR~ 426 (562)
T 3ite_A 392 PDAKGFCDI-----NGRKMYRTGDIVRMDADSSILFLGRK 426 (562)
T ss_dssp TTCCSEEEE-----TTEEEEEEEEEEEECTTSCEEEEEEC
T ss_pred ccccccccC-----CCCEEEecCCEEEEcCCCeEEEEccc
Confidence 555553332 367899999 99999999999995
No 29
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=1.1e-54 Score=469.72 Aligned_cols=361 Identities=18% Similarity=0.160 Sum_probs=286.5
Q ss_pred CCCCCC-cEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhccCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd-~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++|+ ++|+++.++ ++||+||+++++++|++|. .|++|+|+++|++++++++|||+|+|++++|++
T Consensus 32 a~~~p~d~~Al~~~~~--------~~Ty~eL~~~~~~~A~~L~----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~vpl~ 99 (505)
T 3nyq_A 32 PTGAPADRPALRFGER--------SLTYAELAAAAGATAGRIG----GAGRVAVWATPAMETGVAVVAALLAGVAAVPLN 99 (505)
T ss_dssp CCSGGGGSEEEEETTE--------EEEHHHHHHHHHHHHTTCC-------CEEEECCSSHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHhCCCCCeEEEECCe--------eeeHHHHHHHHHHHHhhcc----CCCEEEEEcCCCHHHHHHHHHHHHhCCEEEEcC
Confidence 467776 999999776 9999999999999998775 489999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
|.++.+++.+++++++++++|++.... .. ..... ...+.+.. ...
T Consensus 100 ~~~~~~~l~~il~~~~~~~vi~~~~~~-----~~---~~~~~--~~~~~~~~---------------------~~~---- 144 (505)
T 3nyq_A 100 PKSGDKELAHILSDSAPSLVLAPPDAE-----LP---PALGA--LERVDVDV---------------------RAR---- 144 (505)
T ss_dssp TTCCHHHHHHHHHHHCCSEEEECTTCC-----CC---GGGTT--SEEEECCT---------------------TCC----
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCccc-----cc---hhhcc--cccccccc---------------------ccc----
Confidence 999999999999999999999986421 00 00000 00111100 000
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchh-HHhHHHHHhCC
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~ 423 (608)
.........++|+|||+|||||||+||||+++|+++.+.+.+....++++++|++++.+|++|..+. +.++.+++.|+
T Consensus 145 -~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 223 (505)
T 3nyq_A 145 -GAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGG 223 (505)
T ss_dssp -CCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTC
T ss_pred -cCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCC
Confidence 0111233467899999999999999999999999999998888888999999999999999998887 46899999999
Q ss_pred eEEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcC---CCCCCccccEEEeecCCCChhhhHHHHhhccCCce
Q 007319 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL---EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (608)
Q Consensus 424 ~~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~---~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i 500 (608)
++++.+ .+++..+++.+ ++++|+++++|+++..|.+.... ...+++++|.+++||+++++++.+++...+ ++++
T Consensus 224 ~~~~~~-~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~-~~~~ 300 (505)
T 3nyq_A 224 SVRHLG-RFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAAT-GRRV 300 (505)
T ss_dssp EEEECS-SCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHH-SCCC
T ss_pred EEEECC-CCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhc-CCee
Confidence 999986 57888899999 89999999999999999874221 123467899999999999999998888775 4789
Q ss_pred eccccccccccccccCCCCCCCccCccCcCCCCcEEEEECCCCCcCCC---CCCceeeEEE-ecccCCCcccccCchhhc
Q 007319 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD---DQPCVGEVGL-FPLYLGASDRLLNADHEE 576 (608)
Q Consensus 501 ~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~---g~~~~Gel~v-~~~~~~~~~~~~~~~~t~ 576 (608)
+|.||+||+++.++.. .......+++|+|++|++++|+|++|++++. |+ +|||+| +++.+.+ |+.+++.|+
T Consensus 301 ~~~YG~TE~~~~~~~~-~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~~~~g~--~GEl~v~g~~v~~G--Y~~~~~~t~ 375 (505)
T 3nyq_A 301 IERYGMTETLMNTSVR-ADGEPRAGTVGVPLPGVELRLVEEDGTPIAALDGES--VGEIQVRGPNLFTE--YLNRPDATA 375 (505)
T ss_dssp EEEEEETTTEEEEECC-TTSCCCTTCCCEECTTCEEEEC-----CCCCCCSCC--CEEEEEESTTSCCE--ETTCHHHHH
T ss_pred ecccchhhcccccccC-CCCCCCCCCcccCCCCCEEEEECCCCCCcccCCCCc--eEEEEEecCchhhh--hCCChhHhh
Confidence 9999999998754432 3334556799999999999999999999986 77 499999 5555443 233678888
Q ss_pred cccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 577 VYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 577 ~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
+.|..+ .||+|| ++|+||+|+|+||+
T Consensus 376 ~~f~~~------g~y~TGDl~~~~~dG~l~~~GR~ 404 (505)
T 3nyq_A 376 AAFTED------GFFRTGDMAVRDPDGYVRIVGRK 404 (505)
T ss_dssp HTBCTT------SCEEEEEEEEECTTSCEEEEEES
T ss_pred hhhcCC------CCCccCCeEEECCCccEEEeCCc
Confidence 888633 389999 99999999999994
No 30
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.1e-54 Score=463.35 Aligned_cols=383 Identities=15% Similarity=0.150 Sum_probs=289.3
Q ss_pred cCCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhccCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 185 ~a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
+++++||++|+++.++ ++||+||+++++++|++|++. +||+|+|+++|++++++++|||+++|++++|++
T Consensus 10 ~a~~~pd~~Al~~~~~--------~~Ty~eL~~~~~~lA~~L~~~--~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vpl~ 79 (501)
T 3ipl_A 10 QAQQNGHHIAITDGQE--------SYTYQNLYCEASLLAKRLKAY--QQSRVGLYIDNSIQSIILIHACWLANIEIAMIN 79 (501)
T ss_dssp HHHHHTTSEEEECSSC--------EEEHHHHHHHHHHHHHHHHTT--CCSEEEEECCSSHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHhcCCceEEEeCCc--------EEEHHHHHHHHHHHHHHHHHc--CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecC
Confidence 3478999999998776 999999999999999999986 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhcccCCCCC
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (608)
+.++.+++.+++++++++++|++.............. ...........................+.......
T Consensus 80 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 151 (501)
T 3ipl_A 80 TRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLD----DIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKES---- 151 (501)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEETT----C--------------------------------CC----
T ss_pred ccCCHHHHHHHHHhcCCCEEEEccccccccccccccc----cceeeeeecccccccccccccccccchhhccccCC----
Confidence 9999999999999999999999976432111000000 00000000000000000000000000011100000
Q ss_pred CCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCe
Q 007319 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (608)
Q Consensus 345 ~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (608)
..........++|+|+|+|||||||.||||+++|+++.+.+.+....++++++|++++.+|++|+.++..++.+++.|++
T Consensus 152 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~ 231 (501)
T 3ipl_A 152 PSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFT 231 (501)
T ss_dssp HHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCE
T ss_pred cccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCce
Confidence 00011223567999999999999999999999999999988888888999999999999999999999888899999999
Q ss_pred EEEeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceeccc
Q 007319 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (608)
Q Consensus 425 ~vl~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~Y 504 (608)
+++.+ .+++..+++.|+++++|++.++|+++..|.+...... .+||.+++|||++++++.+++.+. +++++|.|
T Consensus 232 ~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~~Y 305 (501)
T 3ipl_A 232 VRIVD-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---YNLQKILLGGAKLSATMIETALQY--NLPIYNSF 305 (501)
T ss_dssp EEECS-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---TTCCEEEECSSCCCHHHHHHHHHT--TCCEEEEE
T ss_pred EEeCC-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---CcccEEEEeCCCCCHHHHHHHHHh--CCCEeccc
Confidence 99987 5789999999999999999999999999988754332 389999999999999998888763 58899999
Q ss_pred cccccccccccCCCC-CCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEE-ecccCCCcccccCchhhccccccC
Q 007319 505 GGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLNADHEEVYFRGM 582 (608)
Q Consensus 505 G~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~~~~t~~~f~~~ 582 (608)
|+||+++.++..... .....+++|+|++|++++|+|++ .|+ +|||+| +++.+.+ |+.+++.|.. |.
T Consensus 306 G~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~-----~~~--~GEl~v~g~~~~~g--Y~~~~~~t~~-~~-- 373 (501)
T 3ipl_A 306 GMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPN-----KEG--HGELMIKGANVMNG--YLYPTDLTGT-FE-- 373 (501)
T ss_dssp EEGGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEESCC-----SSC--CEEEEEESTTSCSC--CSBSTTCCCS-EE--
T ss_pred cccccccceeecCccccccCCCCCCCCCCCcEEEEecCC-----CCC--ccEEEEeccchhhh--hCcChhhcch-hc--
Confidence 999998644432221 12356789999999999999976 355 499999 6655543 2224555544 42
Q ss_pred CCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 583 PMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 583 p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
++||+|| ++|+||+|+|+||+
T Consensus 374 -----~g~~~TGDl~~~~~~G~l~~~GR~ 397 (501)
T 3ipl_A 374 -----NGYFNTGDIAEIDHEGYVMIYDRR 397 (501)
T ss_dssp -----TTEEEEEEEEEECTTSCEEEEEEC
T ss_pred -----CCceecCCEEEEcCCCeEEEEccc
Confidence 3499999 99999999999995
No 31
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2.3e-52 Score=460.23 Aligned_cols=377 Identities=17% Similarity=0.139 Sum_probs=293.5
Q ss_pred CCCCCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC
Q 007319 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 186 a~~~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~ 264 (608)
++++|+.+++.... +..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 31 a~~~p~~~~~~~~~-----~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 105 (576)
T 3gqw_A 31 ALSSAGMNFYDRRC-----QLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYAGLVAVPLA 105 (576)
T ss_dssp TTSSCEEEEECTTS-----CEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred hhCCCCeEEeCCCC-----CceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCeEeecC
Confidence 47889888875322 1235899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-------HHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhCCCcEEEEecCCCCCCCCCCCCCccHHHhhc
Q 007319 265 DSFA-------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (608)
Q Consensus 265 ~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 337 (608)
+.++ .+++.+++++++++++|++++.. +.........+....... .+.+...
T Consensus 106 ~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 164 (576)
T 3gqw_A 106 IPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWL------PLVNAATHDNPELHVLSH---------------AWFKALP 164 (576)
T ss_dssp CCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGH------HHHHHHGGGCTTCEEEEH---------------HHHHTSC
T ss_pred CCCcccchhhHHHHHHHHHHhcCCCEEEecHHHH------HHHHHhhccCCcceecch---------------hhhhccc
Confidence 9999 89999999999999999987532 122222222221111110 0111111
Q ss_pred ccCCCCCCCCCCCCcCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhh-cCCCCCcEEEEeccccccchhHH-h
Q 007319 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-IDLKVGDVYCWPTNLGWVMGPVI-L 415 (608)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~-~ 415 (608)
. .........++|++||+|||||||.||||+++|+++++.+.+.... ++++++|++++.+|++|++++.. +
T Consensus 165 --~-----~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 237 (576)
T 3gqw_A 165 --E-----ADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFL 237 (576)
T ss_dssp --C-----CCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTTSHHHHHHHT
T ss_pred --c-----cccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCccccccHHHHH
Confidence 0 1112233457999999999999999999999999998887766544 78999999999999999999864 6
Q ss_pred HHHHHhCCeEEEeCC---CCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCc---CCCCCCccccEEEeecCCCChhhhH
Q 007319 416 FSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC---LEGLDWTKIRSFASTGETSNVDDDL 489 (608)
Q Consensus 416 ~~~l~~G~~~vl~~~---~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~---~~~~~l~~Lr~i~~gGe~l~~~~~~ 489 (608)
+.++..|+++++.+. ..++..+++.|+++++|++.++|+++..+.+... ....++++||.+++|||++++++.+
T Consensus 238 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~ 317 (576)
T 3gqw_A 238 LTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEPISAEQLH 317 (576)
T ss_dssp HHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSCCCHHHHH
T ss_pred HHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCccCCHHHHH
Confidence 778999999988763 1367889999999999999999999988865432 2445689999999999999999999
Q ss_pred HHHhhcc-----CCceeccccccccccccccCCCCCC---------------------------CccCccCcCCCCcEEE
Q 007319 490 WLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP---------------------------QAFGAFSTATMTAGLV 537 (608)
Q Consensus 490 ~~~~~~~-----~~~i~~~YG~TE~~~~~~~~~~~~~---------------------------~~~~~iG~p~~~~~~~ 537 (608)
++.+.++ +.+++|.||+||+++.++....... ....++|+|++|++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 397 (576)
T 3gqw_A 318 QFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIE 397 (576)
T ss_dssp HHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEE
T ss_pred HHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEE
Confidence 8887764 5689999999999876544321110 0123899999999999
Q ss_pred EECCCCCcCCCCCCceeeEEE-ecccCCCcccccC-chhhccccccCCCCCCCeEeeee---EEcCCCeEEEEcCC
Q 007319 538 ILDECGVPYPDDQPCVGEVGL-FPLYLGASDRLLN-ADHEEVYFRGMPMYKGMEAWRHH---QADCRGLYHCTGKG 608 (608)
Q Consensus 538 I~d~~g~~~p~g~~~~Gel~v-~~~~~~~~~~~~~-~~~t~~~f~~~p~~~~~~~~~TG---~~~~dG~l~~~GR~ 608 (608)
|+|++|+++|.|+. |||+| +++.+.+ |++ ++.++..+. ++||+|| ++ +||+|+|+||+
T Consensus 398 i~d~~g~~~~~g~~--GEl~v~g~~~~~g---Y~~~~~~~~~~~~-------~g~~~TGDl~~~-~dG~l~~~GR~ 460 (576)
T 3gqw_A 398 IRNEAGMPVAERVV--GHICISGPSLMSG---YFGDQVSQDEIAA-------TGWLDTGDLGYL-LDGYLYVTGRI 460 (576)
T ss_dssp EECTTSCBCCTTBC--EEEEEESTTSCCC---BTTCHHHHHHHHH-------HSCEEEEEEEEE-ETTEEEEEEET
T ss_pred EECCCCCCCCCCCe--EEEEEeCcccccc---ccCCccccccccC-------CCeeeccceEEE-ECCEEEEEecC
Confidence 99999999999995 99999 6655543 444 444554442 3489999 77 79999999995
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=1.7e-33 Score=289.72 Aligned_cols=211 Identities=15% Similarity=0.103 Sum_probs=176.3
Q ss_pred CCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCCh
Q 007319 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (608)
Q Consensus 355 ~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~ 434 (608)
.+|+|||+|||||||+||||++||+++.+.+.+....++++++|++++++|++|++++..++.+++.|+++++.+...+
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~~~- 114 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPTAN- 114 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCCSC-
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcccc-
Confidence 3789999999999999999999999999999888889999999999999999999999888999999999999874433
Q ss_pred hhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCChhhhHHHHhhccCCceeccccccccccccc
Q 007319 435 RSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYI 514 (608)
Q Consensus 435 ~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~ 514 (608)
+++.|+++++|++.++|+++..|++... ...++++||.+++||+++++++.+++.+. +++++|.||+||+++.++
T Consensus 115 --~~~~i~~~~~t~~~~~P~~l~~ll~~~~-~~~~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt~~~~~ 189 (358)
T 4gs5_A 115 --PLAGLDHADFDFVAMVPMQLQSILENSA-TSGQVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTETVSHVA 189 (358)
T ss_dssp --TTTTCSSCCCSEEEECHHHHHHHHHCTT-TGGGGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGGSSEEE
T ss_pred --HHHHHHHhCCeEEEcChHHHHHhhcccc-ccccCCcceEEEEcccCCCchheeccccc--CceEEeccccccccceee
Confidence 4567889999999999999999988754 34568999999999999999999888754 578999999999987544
Q ss_pred cCCCCCCCccCccCcCCCCcEEEEECCCCCcCCCCCCceeeEEEecccCCCcccccCchhhccccccCCCCCCCeEeeee
Q 007319 515 QGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMEAWRHH 594 (608)
Q Consensus 515 ~~~~~~~~~~~~iG~p~~~~~~~I~d~~g~~~p~g~~~~Gel~v~~~~~~~~~~~~~~~~t~~~f~~~p~~~~~~~~~TG 594 (608)
.. .......+++|.|.||+++.+.+ .|||++... +. .+.||+||
T Consensus 190 ~~-~~~~~~~g~~~~~~pgv~~~~~~------------~Gel~~~g~-----------------~~------~~g~~~TG 233 (358)
T 4gs5_A 190 LK-ALNGPEASELYVFLPGIQYGVDE------------RGCLHISGA-----------------VT------NGQTVQTN 233 (358)
T ss_dssp EE-ECSSTTCCSCEEECTTCEEEECT------------TSEEEEESG-----------------GG------TTCCEEEE
T ss_pred cc-cccccccceeeccCCCeEEEecC------------cCceEEecc-----------------cc------cCcceecC
Confidence 33 23344567899999999988743 299998321 11 12389999
Q ss_pred ---EEcCCCeEEEEcCC
Q 007319 595 ---QADCRGLYHCTGKG 608 (608)
Q Consensus 595 ---~~~~dG~l~~~GR~ 608 (608)
++|+|| ++|+||+
T Consensus 234 Dlg~~d~~g-~~~~GR~ 249 (358)
T 4gs5_A 234 DLVEIHGNA-FQWIGRA 249 (358)
T ss_dssp EEEEECSSE-EEEEEEG
T ss_pred CccccccCc-eEEcccc
Confidence 999999 6678995
No 33
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.98 E-value=4.3e-32 Score=288.39 Aligned_cols=230 Identities=16% Similarity=0.111 Sum_probs=180.7
Q ss_pred cCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhh---hhcCCCCCcEEEEecccc-ccchhHHhHHHHHhCCeEEE
Q 007319 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLG-WVMGPVILFSSFLNGATLAL 427 (608)
Q Consensus 352 ~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~~~~-~~~~~~~~~~~l~~G~~~vl 427 (608)
...++++++|+|||||||+||||+++|+++.+...... ..++++++|++++..|++ |..+...++.++..|+++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 34668999999999999999999999999876544332 357889999999999985 56666667889999999998
Q ss_pred eCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCC--CccccEEEeecCCCChhhhHHHHhhccCCceecccc
Q 007319 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD--WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (608)
Q Consensus 428 ~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~--l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG 505 (608)
.+ ..++..+++.|+++++|++.++|+++..|++.......+ +++||.+++|||++++++.+++.+.+ +++++|.||
T Consensus 168 ~~-~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG 245 (443)
T 2y4o_A 168 MS-GGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRV-GIDALDIYG 245 (443)
T ss_dssp CC-SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TCEEEEEEE
T ss_pred CC-CCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHh-CcCEEeccC
Confidence 76 458899999999999999999999999998753322222 47999999999999999999988777 488999999
Q ss_pred ccccccc-cccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEEecccCCCcccccCchhhccccccCC
Q 007319 506 GTELSSA-YIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (608)
Q Consensus 506 ~TE~~~~-~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v~~~~~~~~~~~~~~~~t~~~f~~~p 583 (608)
+||+++. +...... .....+.|.+++.++|+| ++|+++|.|+. |||+|... +++.| |
T Consensus 246 ~TE~~g~~~~~~~~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~G~~--Gel~v~~~-------------t~~~~---p 304 (443)
T 2y4o_A 246 LSEVMGPGVACECVE---TKDGPVIWEDHFYPEIIDPVTGEVLPDGSQ--GELVFTSL-------------TKEAM---P 304 (443)
T ss_dssp ETTTTEEEEEEECTT---TCCSEEECTTTEEEEEECTTTCCBCCTTCC--EEEEEEES-------------SCSSS---C
T ss_pred chhhcCCeEEeccCC---CCCceEEccCCeEEEEEcCCCCCCCCCCCc--eEEEEeCC-------------CcccC---h
Confidence 9997432 2222211 111145577899999999 56999999995 99999421 11133 2
Q ss_pred CCCCCeEeeee---EEcCC-CeE-----EEEcCC
Q 007319 584 MYKGMEAWRHH---QADCR-GLY-----HCTGKG 608 (608)
Q Consensus 584 ~~~~~~~~~TG---~~~~d-G~l-----~~~GR~ 608 (608)
..||+|| ++++| |++ +|+||+
T Consensus 305 ----~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~ 334 (443)
T 2y4o_A 305 ----VIRYRTRDLTALLPPTARAMRRLAKITGRS 334 (443)
T ss_dssp ----CSSEEEEEEECEECCSSSSSCEECCCCEES
T ss_pred ----hheeecCCEEEEcCCCCCCccccCcccccc
Confidence 2389999 89999 997 899995
No 34
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.97 E-value=1e-31 Score=284.94 Aligned_cols=230 Identities=19% Similarity=0.167 Sum_probs=183.1
Q ss_pred cCCC-CCeEEEEeccCCCCCCcEEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchh-HHhHHHHHhCCeEE
Q 007319 352 YNPV-DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLA 426 (608)
Q Consensus 352 ~~~~-~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~~v 426 (608)
..++ +++++|+|||||||.||||+++|+++.+.+... ...++++++|++++..|++|..+. ..++.++..|++++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 160 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTV 160 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEE
Confidence 3455 899999999999999999999999987665544 334588999999999998765554 45788899999999
Q ss_pred EeCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCC--CCccccEEEeecCCCChhhhHHHHhhccCCceeccc
Q 007319 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (608)
Q Consensus 427 l~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~--~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~Y 504 (608)
+.+ ..++..+++.|+++++|++.++|+++..|.+....... ++++||.+++|||++++++.+++.+.+ +++++|.|
T Consensus 161 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~Y 238 (436)
T 3qov_A 161 PAA-AGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERML-NVKAYNSF 238 (436)
T ss_dssp CCC-SCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEE
T ss_pred eCC-CCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHh-CccEEecC
Confidence 876 45889999999999999999999999999876433232 378999999999999999999998877 48999999
Q ss_pred cccccccccccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEEecccCCCcccccCchhhccccccCC
Q 007319 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (608)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v~~~~~~~~~~~~~~~~t~~~f~~~p 583 (608)
|+||+++.++.... +. ...+|.|.+++.++|+| ++|+++|+|+. |||+|.... +..| |
T Consensus 239 G~TE~~~~~~~~~~--~~-~~g~~~~~~~~~v~i~d~~~g~~~~~g~~--Gel~v~~~~-------------~~~~---~ 297 (436)
T 3qov_A 239 GMTEMNGPGVAFEC--QE-QNGMHFWEDCYLVEIIDPETGEPVPEGEI--GELVLTTLD-------------REMM---P 297 (436)
T ss_dssp EEGGGTEEEEEEEC--TT-CSSEEECTTTEEEEEECTTTCSBCSTTCC--EEEEEEESS-------------CCSS---C
T ss_pred cchhhcCCeeEEec--CC-CCeeEEccCceEEEEEECCCCCCCCCCCc--eEEEEeccC-------------cCCc---e
Confidence 99999543222111 11 12366788899999999 88999999995 999994211 1123 1
Q ss_pred CCCCCeEeeee---EEcCCC------e---EEEEcCC
Q 007319 584 MYKGMEAWRHH---QADCRG------L---YHCTGKG 608 (608)
Q Consensus 584 ~~~~~~~~~TG---~~~~dG------~---l~~~GR~ 608 (608)
..||+|| ++++|| + ++|+||+
T Consensus 298 ----~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~ 330 (436)
T 3qov_A 298 ----LIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRS 330 (436)
T ss_dssp ----CCSEEEEEEECEECSCCTTCCCSCEECCCCCBS
T ss_pred ----EEEEEcCCEEEEcCCCCCCCCCccccCcccCcc
Confidence 2389999 899998 6 6999995
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.97 E-value=8.9e-31 Score=277.75 Aligned_cols=230 Identities=18% Similarity=0.138 Sum_probs=180.7
Q ss_pred cCCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhh---hhcCCCCCcEEEEeccc-cccchhHHhHHHHHhCCeEEE
Q 007319 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNL-GWVMGPVILFSSFLNGATLAL 427 (608)
Q Consensus 352 ~~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~~~-~~~~~~~~~~~~l~~G~~~vl 427 (608)
...++++++|+|||||||.||||+++|+++........ ..++++++|++++..|+ .|..++..++.++..|+++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 34568999999999999999999999999876554332 35788999999999998 566666667889999999998
Q ss_pred eCCCCChhhHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCC--CccccEEEeecCCCChhhhHHHHhhccCCceecccc
Q 007319 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLD--WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (608)
Q Consensus 428 ~~~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~--l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~i~~~YG 505 (608)
.+ ..++..+++.|+++++|++.++|+++..|.+.......+ +++||.+++|||++++++.+++.+.+ +++++|.||
T Consensus 166 ~~-~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG 243 (437)
T 2y27_A 166 FG-GGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRM-GIDAVDIYG 243 (437)
T ss_dssp CC-SCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEE
T ss_pred CC-CCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHH-CcCEEecCC
Confidence 76 458899999999999999999999999998753322222 47899999999999999999988776 488999999
Q ss_pred ccccccc-cccCCCCCCCccCccCcCCCCcEEEEEC-CCCCcCCCCCCceeeEEEecccCCCcccccCchhhccccccCC
Q 007319 506 GTELSSA-YIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (608)
Q Consensus 506 ~TE~~~~-~~~~~~~~~~~~~~iG~p~~~~~~~I~d-~~g~~~p~g~~~~Gel~v~~~~~~~~~~~~~~~~t~~~f~~~p 583 (608)
+||+++. +...+.. ....++.|.+++.++|+| ++|+++|.|+. |||+|... +++.| |
T Consensus 244 ~TE~~g~~~~~~~~~---~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~--Gel~v~~~-------------t~~~~---~ 302 (437)
T 2y27_A 244 LSEVMGPGVASECVE---TKDGPTIWEDHFYPEIIDPETGEVLPDGEL--GELVFTSL-------------TKEAL---P 302 (437)
T ss_dssp ETTTTEEEEEECCTT---TCSSCEECTTTEEEEEECTTTCCBCCTTCC--EEEEEEES-------------SCSSS---C
T ss_pred chhhcCCeeEEecCC---CCCceeEccCceEEEEEcCCCCCCCCCCCc--cEEEEecC-------------CcCCc---h
Confidence 9998432 2322221 111255677899999999 56999999995 99999421 11133 2
Q ss_pred CCCCCeEeeee---EEcC-CCeE-----EEEcCC
Q 007319 584 MYKGMEAWRHH---QADC-RGLY-----HCTGKG 608 (608)
Q Consensus 584 ~~~~~~~~~TG---~~~~-dG~l-----~~~GR~ 608 (608)
..||+|| ++++ ||++ +|+||+
T Consensus 303 ----~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~ 332 (437)
T 2y27_A 303 ----IIRYRTRDLTRLLPGTARTMRRMEKITGRS 332 (437)
T ss_dssp ----CCSEEEEEEECEECCSSSSSCEECCCCEEG
T ss_pred ----hheeecCCEEEEeCCCCCCccccCcccccc
Confidence 2389999 8898 6996 899995
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.97 E-value=3.6e-30 Score=266.79 Aligned_cols=196 Identities=14% Similarity=0.055 Sum_probs=162.1
Q ss_pred CCCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccc-cccchhHHhHHHHHhCCeEEEe
Q 007319 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNL-GWVMGPVILFSSFLNGATLALY 428 (608)
Q Consensus 353 ~~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~-~~~~~~~~~~~~l~~G~~~vl~ 428 (608)
.+++++++|+|||||||+||||+++|+++.+.+.+. ...++++++|++++..|+ .|+.+....+.++..|+ +++.
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v~~ 166 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGG-MFFS 166 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CEEC
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCC-EEEC
Confidence 467899999999999999999999999998877743 355678999999999999 88888877777899999 5554
Q ss_pred CCCCChh-----------------------hHHHHHHHhCCcEEEecHHHHHHHHhcCcCCCCCCccccEEEeecCCCCh
Q 007319 429 QGSPLER-----------------------SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNV 485 (608)
Q Consensus 429 ~~~~~~~-----------------------~~~~~i~~~~it~~~~~Ps~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~ 485 (608)
. .+++. .+++.|+++++|++.++|+++..|++.......++++||.+++|||++++
T Consensus 167 ~-~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~ 245 (369)
T 3hgu_A 167 I-DIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNL 245 (369)
T ss_dssp C-CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCH
T ss_pred c-cCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCH
Confidence 3 45665 77789999999999999999999987643223457899999999999999
Q ss_pred hhhHHHH-hhccCCceeccccccccccccccCCCCCCCccCccCcC------CCCcEEEEECC-CCCcCCCCCCceeeEE
Q 007319 486 DDDLWLS-SKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA------TMTAGLVILDE-CGVPYPDDQPCVGEVG 557 (608)
Q Consensus 486 ~~~~~~~-~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~iG~p------~~~~~~~I~d~-~g~~~p~g~~~~Gel~ 557 (608)
++.+++. +.+++++++|.||+||+++++..+ . ..++|+| +++++++|+|+ +|+++|+|+. |||+
T Consensus 246 ~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~-~-----~~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~--GEl~ 317 (369)
T 3hgu_A 246 DEIKFIASEILPDCEFSASYGSTSALGVSRSL-L-----ITSESQQVIYDSFSPFITYDVVDSITAQTVEYGER--GNVI 317 (369)
T ss_dssp HHHHHHHHHTCTTSEEEEEEEEGGGTEEEEEC-C-----BCTTCSSCEEECCTTTEEEEEECTTTCSBCCTTCE--EEEE
T ss_pred HHHHHHHHHhCCCcEEEcccCchhhhcceecc-c-----cccCCCcccccCCCCCeEEEEECCCCCcCCCCCCc--eEEE
Confidence 9999999 888778999999999988654221 1 1158999 99999999997 9999999995 9999
Q ss_pred E
Q 007319 558 L 558 (608)
Q Consensus 558 v 558 (608)
|
T Consensus 318 v 318 (369)
T 3hgu_A 318 V 318 (369)
T ss_dssp E
T ss_pred E
Confidence 9
No 37
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.58 E-value=1.1e-09 Score=118.04 Aligned_cols=128 Identities=12% Similarity=0.017 Sum_probs=101.7
Q ss_pred HHhcCCCchhhHHHHHHHHHHhhhcCCC-chhHHHHHHHHHHhcCCCCCCCchhhhhhhhhccccccCCCCC----cc--
Q 007319 13 LMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----LY-- 85 (608)
Q Consensus 13 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~----~~-- 85 (608)
.+|++++++...+|.++|+++++...++ +||++||++ |++.+++.|..+.+ |+||++|++++...... ..
T Consensus 374 ~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~~-i~~~l~~~r~~~~~--~lf~~~~~~~~~~~~~~~~~~~~~~ 450 (520)
T 2jgp_A 374 TLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFEE-LVEKLAIARDLSRN--PLFDTVFTFQNSTEEVMTLPECTLA 450 (520)
T ss_dssp EEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHHH-HHHHTCCCCCTTSC--SSCSEEEEEECCCCSCCCCSSEEEE
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhcCCCCCCCC--CcEEEEEEEecCCCccccCCCceeE
Confidence 3578899999999999999999998877 999999999 99999888875455 56999999998653221 11
Q ss_pred ccCCcch--hcccchHHHHHHhCCcccccc-cCCCccchHHHHHhhhhChHHHHHHHHhhccceee
Q 007319 86 WFPSLDQ--SKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFR 148 (608)
Q Consensus 86 ~~~~~~~--~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 148 (608)
..+.... ..++||.+.+...++++...+ |+. ++|...+++++.++|.++++++...++
T Consensus 451 ~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~lL~~l~~~p~ 511 (520)
T 2jgp_A 451 PFMTDETGQHAKFDLTFSATEEREEMTIGVEYST-----SLFTRETMERFSRHFLTIAASIVQNPH 511 (520)
T ss_dssp ECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEET-----TTCCHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EeecCCCCcceeeeeEEEEEECCCeEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCcc
Confidence 1111122 678899888877788888888 977 999999999999999999998764443
No 38
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.06 E-value=5.7e-08 Score=102.11 Aligned_cols=130 Identities=6% Similarity=-0.120 Sum_probs=97.5
Q ss_pred HHhcCCCchhhHHHHHHHHHHhhhcCCC-chhHHHHHHHHHHhcCCCCCCCchhhhhhhhhccccccCCCCCcc---c--
Q 007319 13 LMKVGLKLEEAEEFDKILKQVISCSKGL-DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLY---W-- 86 (608)
Q Consensus 13 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~~---~-- 86 (608)
.+|++++++...+|.++|+++++...++ +||++||++ |++.++..+. .+ |+|+++|++++.... ... .
T Consensus 278 ~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~l~~~~~--~~--~lf~~~~~~~~~~~~-~~~~~~~~~ 351 (436)
T 1l5a_A 278 SLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQDQGLNAE--QS--YFMSPFINILPFESP-HFADCQTEL 351 (436)
T ss_dssp EEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHHHTTCCTT--CC--BCCCSEEEEECCCCC-CCTTCEEEE
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHH-HHHHhccccc--CC--CccceEEEeeccCcc-ccCCCeeEE
Confidence 4678999999999999999999998887 999999999 9999976543 34 569999999875443 110 0
Q ss_pred cCCcchhcccchHHHHH-HhCCcccccc-cCCCccchHHHHHhhhhChHHHHHHHHhhccce---eecccccc
Q 007319 87 FPSLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVV---FREAPKCI 154 (608)
Q Consensus 87 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 154 (608)
......... ||.+.+. ..++++...+ |+. +.|...+++++.+.|..+++++... ++.+...+
T Consensus 352 ~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~~l~~l~~~~~~p~~~l~~l 418 (436)
T 1l5a_A 352 KVLASGSAE-GINFTFRGSPQHELCLDITADL-----ASYPQSHWQSHCERFPRFFEQLLARFQQVEQDVARL 418 (436)
T ss_dssp EEEEECCCC-SEEEEEEECTTSCEEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHHHHTTTTCHHHH
T ss_pred EecCCCCcc-ceEEEEEecCCCcEEEEEEeCh-----hhCCHHHHHHHHHHHHHHHHHHHhccCCCcccHHHH
Confidence 011112233 7777765 3566777778 877 9999999999999999999998655 55554444
No 39
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.05 E-value=1e-07 Score=101.95 Aligned_cols=130 Identities=8% Similarity=-0.099 Sum_probs=88.3
Q ss_pred HHhcCCCchh--hHHHHHHHHHHhhhcCCC-chhHHHHHHHHHH---hcCCCCCCCchhhhhhhhhccccccCCCCCcc-
Q 007319 13 LMKVGLKLEE--AEEFDKILKQVISCSKGL-DAREIWRELVARK---VLKPWHPHGLHQLVYYSVYNDWDASIKGPPLY- 85 (608)
Q Consensus 13 ~~~~~~~~~~--~~~f~~~l~~~~~~~~~~-~hq~~pf~~~l~~---~l~~~r~~~~~~~plfq~~~~~~~~~~~~~~~- 85 (608)
.+|+++.+++ ..+|.++|+++++...++ +| ++||++ |++ .|+..|..+.+ |+||++|++++........
T Consensus 299 ~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~~-i~~~~~~l~~~~~~~~~--~lf~~~~~~~~~~~~~~~~~ 374 (493)
T 4hvm_A 299 RVVFGVDLTGLREPSFRDLMSRTQAGFLDAVVH-YLPYHD-VVDLAVDLGVVTPPRVA--ARWDVAVHLCRNAPSSSLTR 374 (493)
T ss_dssp EEEEEEECTTCSSCBHHHHHHHHHHHHHHHHHT-CCCHHH-HHHHHHHTTSCBTTBTT--GGGCEEECC-----------
T ss_pred eeEEEEecCCCcCCCHHHHHHHHHHHHHHHHhh-cCCHHH-HHHHHhhhCcccCCCCC--cceeEEEEEEecCCcccccc
Confidence 4567888888 999999999999998887 99 999999 999 88887775555 5699999998654332110
Q ss_pred -----------ccCCc----------------chhcccc---hHHHHHHhCCcccccc-cCCCccchHHHHHhhhhChHH
Q 007319 86 -----------WFPSL----------------DQSKLTN---LGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEA 134 (608)
Q Consensus 86 -----------~~~~~----------------~~~~~~~---l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~ 134 (608)
..+.. ...+++| +.+.+...++++...+ |+. ++| ..+++++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y~~-----~l~-~~~i~~l~~ 448 (493)
T 4hvm_A 375 GERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQRR-----THP-AGGGSALLD 448 (493)
T ss_dssp ---------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEECC-------------CHHHH
T ss_pred ccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEEcc-----ccC-HHHHHHHHH
Confidence 00000 1124567 8888777788888888 987 888 999999999
Q ss_pred HHHHHHhhccceeecccc
Q 007319 135 YWEIALKEISVVFREAPK 152 (608)
Q Consensus 135 ~~~~~l~~~~~~~~~~~~ 152 (608)
.|..+++++...++.+..
T Consensus 449 ~~~~~L~~~~~~p~~~l~ 466 (493)
T 4hvm_A 449 GLDAAMAQAVADPSAPLP 466 (493)
T ss_dssp HHHHHHHHHHHCTTSBCC
T ss_pred HHHHHHHHHHhCCCCccc
Confidence 999999998655544443
No 40
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=96.78 E-value=3.4e-05 Score=81.42 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=84.9
Q ss_pred HHhcCCCchhhHHHHHHHHHHhhhcCCCchhHHHHHHHHHHhcCCC---CCCCchhhhhhhhhccccccCCCC----Ccc
Q 007319 13 LMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPW---HPHGLHQLVYYSVYNDWDASIKGP----PLY 85 (608)
Q Consensus 13 ~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~pf~~~l~~~l~~~---r~~~~~~~plfq~~~~~~~~~~~~----~~~ 85 (608)
.+|++++++...+|.++|+++++...++.||++||+. + +.+... +....... ++++|++++..... ...
T Consensus 309 ~lplr~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~--p~~~f~~~~~~~~~~~~~~~~ 384 (466)
T 2xhg_A 309 QYPVLLDLKQTAPLSDYIKLTKENMRKIPRKGIGYDI-L-KHVTLPENRGSLSFRVQ--PEVTFNYLGQFDADMRTELFT 384 (466)
T ss_dssp EEEEEEECSCCCSHHHHHHHHHHHHHHSGGGGTHHHH-H-HHTSCGGGSTTCCCCCC--CSEEEEEEEECCTTCSSSSCE
T ss_pred eccEEEecCCCCCHHHHHHHHHHHHHhCccCCcccce-e-eecccccccccccccCC--CeEEEeecCcccccccCCcee
Confidence 3678899999999999999999997777999999996 5 555432 12222333 46888876422111 110
Q ss_pred c--cCC-------------cchhcccchHHHHHHhCCcccccc-cCCCccchHHHHHhhhhChHHHHHHHHhhcc
Q 007319 86 W--FPS-------------LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEIS 144 (608)
Q Consensus 86 ~--~~~-------------~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 144 (608)
. .+. ......++|.+.+...++++...+ |+. ++|...+++++.+.|.++|+++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~~~~~L~~l~ 454 (466)
T 2xhg_A 385 RSPYSGGNTLGADGKNNLSPESEVYTALNITGLIEGGELVLTFSYSS-----EQYREESIQQLSQSYQKHLLAII 454 (466)
T ss_dssp ECTTCTTCCSSTTCTTSBCTTSBCCCSEEEEEEEETTEEEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCccccCcccccccccccCcceeEEEEEEEECCEEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHH
Confidence 0 000 011236677776666677788888 987 99999999999999999999875
No 41
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=95.70 E-value=0.035 Score=59.10 Aligned_cols=30 Identities=30% Similarity=0.534 Sum_probs=25.0
Q ss_pred CCCCCeEEEEeccCCC-CCCcEEEeCCchhH
Q 007319 353 NPVDAVVNILFSSGTT-GEPKAIPWTQLSSI 382 (608)
Q Consensus 353 ~~~~d~a~ii~TSGTT-G~PKgV~~sh~~~~ 382 (608)
..++.+.+..-||||| |++|-+.+|...+-
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~ 120 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLD 120 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHH
Confidence 3456677999999999 78999999998764
No 42
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=94.84 E-value=0.12 Score=55.30 Aligned_cols=31 Identities=35% Similarity=0.380 Sum_probs=26.0
Q ss_pred CCCCCeEEEEeccCCC-CCCcEEEeCCchhHH
Q 007319 353 NPVDAVVNILFSSGTT-GEPKAIPWTQLSSIR 383 (608)
Q Consensus 353 ~~~~d~a~ii~TSGTT-G~PKgV~~sh~~~~~ 383 (608)
..++.+.++.-||||| |+||-+.+|...+-.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 3557778999999999 889999999987643
No 43
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=94.43 E-value=0.21 Score=53.01 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=25.2
Q ss_pred CCCCCeEEEEeccCCC-CCCcEEEeCCchhHH
Q 007319 353 NPVDAVVNILFSSGTT-GEPKAIPWTQLSSIR 383 (608)
Q Consensus 353 ~~~~d~a~ii~TSGTT-G~PKgV~~sh~~~~~ 383 (608)
..++.+.+..-||||| |++|-+.+|...+-.
T Consensus 95 L~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 95 LTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 3456677999999999 889999999876543
No 44
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=89.70 E-value=0.025 Score=58.20 Aligned_cols=104 Identities=10% Similarity=-0.110 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhhhcCCC-chhHHH-----HHHHHHHhcCCCCCCCchhhhhhhhhc-cccccCCCCCc---cc--cCCc
Q 007319 23 AEEFDKILKQVISCSKGL-DAREIW-----RELVARKVLKPWHPHGLHQLVYYSVYN-DWDASIKGPPL---YW--FPSL 90 (608)
Q Consensus 23 ~~~f~~~l~~~~~~~~~~-~hq~~p-----f~~~l~~~l~~~r~~~~~~~plfq~~~-~~~~~~~~~~~---~~--~~~~ 90 (608)
+.+|.++++++++...++ +||++| |++ +++.+++. .|+ +++| ++......... .. ....
T Consensus 297 ~~~~~~~l~~v~~~~~~~~~~~~~~~~~l~~~~-i~~~~~~~-------~pl-~~~~~n~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 1q9j_A 297 NTDIVDLASDIVATLRADLANGVIQQSGLHFGT-AFEGTPPG-------LPP-LVFCTDATSFPTMRTPPGLEIEDIKGQ 367 (422)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTHHHHSCCBGGG-GGGCCCSS-------SCC-CEEEECCCCCCSCCCCTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhcCeeeecccchHH-HhcccCCC-------CCc-eEEEecCCcCCCCCCCCCceeEeeecc
Confidence 457999999999998877 999995 889 88887632 233 5555 44322211110 00 0001
Q ss_pred ch-hcccchHHH-HHHhCCcccccccCCCccchHHHHHhhhhChHHHHHHHHhhcc
Q 007319 91 DQ-SKLTNLGNA-LEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEIS 144 (608)
Q Consensus 91 ~~-~~~~~l~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 144 (608)
.. ...+++.+. +...++++...+|+. + .+++++.++|.++++++.
T Consensus 368 ~~~~~~~~l~~~~~~~~~~~l~~~~y~~-----~----~~~~~l~~~~~~~L~~l~ 414 (422)
T 1q9j_A 368 FYCSISVPLDLYSCAVYAGQLIIEHHGH-----I----AEPGKSLEAIRSLLCTVP 414 (422)
T ss_dssp ECCBSSCCCCEEEEEEETTEEEEEEESS-----C----SSHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCceEEEEEeeCCeEEEEEecC-----c----cchHHHHHHHHHHHHHhh
Confidence 11 345666655 445566665555654 3 889999999999999875
No 45
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=84.06 E-value=4.9 Score=41.09 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=74.5
Q ss_pred CCCcEEEEEecCCCCCC-CcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEEecC
Q 007319 189 EDNTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSIA 264 (608)
Q Consensus 189 ~pd~~Av~~~~~~~~~~-~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~--s~e~iva~lA~~kaGa~~vpl~ 264 (608)
.++.+|.+..-.+..+. ....+|.+.+...+..+++.+... +.++|++...++- ....+..+++.+..|+..++++
T Consensus 88 ~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 167 (437)
T 2y27_A 88 PQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFG 167 (437)
T ss_dssp CGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCC
T ss_pred ChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCC
Confidence 45666644332221111 223689999988888888877778 9999999998885 3455556788999999998876
Q ss_pred CCCCHHHHHHHHHhcCceEEEeecce
Q 007319 265 DSFAAREIATRLRVSKAKGIFTQDFI 290 (608)
Q Consensus 265 ~~~~~~~l~~~l~~~~~~~ii~~~~~ 290 (608)
. ...+.+...+++.++.+++..+.+
T Consensus 168 ~-~~~~~~~~~i~~~~~t~l~~~Ps~ 192 (437)
T 2y27_A 168 G-GQTEKQVQLIQDFRPDIIMVTPSY 192 (437)
T ss_dssp S-CCHHHHHHHHHHHCCSEEEECHHH
T ss_pred C-CCHHHHHHHHHHhCCCEEEECHHH
Confidence 5 478899999999999999987653
No 46
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=83.07 E-value=5.6 Score=40.74 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=67.1
Q ss_pred EecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEE
Q 007319 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (608)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~--s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii 285 (608)
.+|.+.+...+..+++.+... +.++|++...++- ....+..+++++..|+..++++.. ..+++...+++.++.+++
T Consensus 111 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l~ 189 (443)
T 2y4o_A 111 GYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKIIL 189 (443)
T ss_dssp EECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEEE
T ss_pred ecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEEE
Confidence 589999988888888877778 9999999998885 345556678889999998887654 788899999999999998
Q ss_pred eecce
Q 007319 286 TQDFI 290 (608)
Q Consensus 286 ~~~~~ 290 (608)
..+.+
T Consensus 190 ~~Ps~ 194 (443)
T 2y4o_A 190 VTPSY 194 (443)
T ss_dssp ECHHH
T ss_pred ECHHH
Confidence 87653
No 47
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=82.25 E-value=6 Score=40.42 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=75.5
Q ss_pred CcEEEEEecCCCCCC-CcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEEecCCC
Q 007319 191 NTVAIVWREDRCDES-AVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSIADS 266 (608)
Q Consensus 191 d~~Av~~~~~~~~~~-~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~--s~e~iva~lA~~kaGa~~vpl~~~ 266 (608)
+.+|.+..-.+..+. ....+|.+.+...+..+++.+... +.++|++...++- ....+..+++.+..|+..++.+.
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~- 164 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA- 164 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS-
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC-
Confidence 677765443221111 223689999999888888888888 9999999998874 45566678889999999888765
Q ss_pred CCHHHHHHHHHhcCceEEEeecce
Q 007319 267 FAAREIATRLRVSKAKGIFTQDFI 290 (608)
Q Consensus 267 ~~~~~l~~~l~~~~~~~ii~~~~~ 290 (608)
..++.+...+++.++.+++..+.+
T Consensus 165 ~~~~~~~~~i~~~~~t~~~~~P~~ 188 (436)
T 3qov_A 165 GNSKRQIKFISDFKTTALHAIPSY 188 (436)
T ss_dssp CCHHHHHHHHHHHTCCEEECCHHH
T ss_pred CCHHHHHHHHHHHCCCEEEECHHH
Confidence 467888999999999999887643
No 48
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=77.03 E-value=7.1 Score=41.30 Aligned_cols=99 Identities=11% Similarity=0.004 Sum_probs=70.9
Q ss_pred CCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCC
Q 007319 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (608)
Q Consensus 356 ~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~ 432 (608)
+.+|.+.+..+.++ ..+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++...
T Consensus 35 ~~~a~~a~~~~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~ 109 (550)
T 3rix_A 35 LVPGTIAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFF-MPVLGALFIGVAVAPANDIY 109 (550)
T ss_dssp TSTTCEEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTH-HHHHHHHHHTCEEEECCTTC
T ss_pred CCceEEEeeecCCC----cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHH-HHHHHHHHcCCEEeecCCcC
Confidence 44555544444333 3688887754443 3334568999999988887765433 44678899999999988677
Q ss_pred ChhhHHHHHHHhCCcEEEecHHHHHHH
Q 007319 433 LERSFGKFVQDAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 433 ~~~~~~~~i~~~~it~~~~~Ps~l~~l 459 (608)
....+...++..++++++..+.....+
T Consensus 110 ~~~~l~~~l~~~~~~~vi~~~~~~~~~ 136 (550)
T 3rix_A 110 NERELLNSMNISQPTVVFVSKKGLQKI 136 (550)
T ss_dssp CHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEcHHHHHHH
Confidence 788999999999999999887765554
No 49
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=74.70 E-value=18 Score=38.07 Aligned_cols=103 Identities=11% Similarity=-0.018 Sum_probs=72.4
Q ss_pred CCCCeEEEEeccCC-CCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeC
Q 007319 354 PVDAVVNILFSSGT-TGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (608)
Q Consensus 354 ~~~d~a~ii~TSGT-TG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~ 429 (608)
.|+.+|++....+. .+. .-.+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++
T Consensus 32 ~p~~~A~~~~~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 32 FGEKTAIISAEPKFPSEF--PESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYV-MTIYALWRVAATPVPIN 108 (549)
T ss_dssp HTTSEEEEEESSCCCCSS--CSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEECC
T ss_pred CCCceEEEeCCCcccccc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEEccC
Confidence 45778876543211 121 24577777654433 3334568999999988887765433 44678899999999988
Q ss_pred CCCChhhHHHHHHHhCCcEEEecHHHHHHH
Q 007319 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 430 ~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l 459 (608)
.......+...+++.+++++...+.....+
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 677788999999999999999887665544
No 50
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=72.98 E-value=22 Score=37.40 Aligned_cols=100 Identities=16% Similarity=0.002 Sum_probs=71.6
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++....+ .+..+|++.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 31 ~p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~ 104 (541)
T 1v25_A 31 FGRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHL-EAYFAVPGMGAVLHTANP 104 (541)
T ss_dssp STTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEEecCc
Confidence 3566776543211 345688887754443 3334568999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l~~l 459 (608)
......+...+++.++.+++..+.....+
T Consensus 105 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 105 RLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred ccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 66778899999999999999887765444
No 51
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=72.55 E-value=13 Score=38.83 Aligned_cols=95 Identities=12% Similarity=-0.028 Sum_probs=70.7
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. .+..+|++.+...+... ....++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 19 ~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~Ga~~vpl~~ 88 (509)
T 3ivr_A 19 FPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMI-ELIGAVALIGAILLPVNY 88 (509)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHH-HHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 457777764 12468888776544433 34468999999988887765432 446788999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l~~ 458 (608)
....+.+...+++.++.++...+.....
T Consensus 89 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 89 RLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 7778899999999999999988776554
No 52
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=71.72 E-value=25 Score=37.28 Aligned_cols=101 Identities=8% Similarity=-0.039 Sum_probs=71.6
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhh---hhc-CCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~---~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~ 429 (608)
.|+.+|++.... .| ....+|++.+...+.... ... ++.++|++...++-+.... ..+++++..|+..+.++
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Ga~~vpl~ 130 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWW-LVILGCIRAGLIFMPGT 130 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHH-HHHHHHHHHTCEEEECC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEecC
Confidence 457777765421 12 245688887755443332 334 8899999988887765433 44678899999999988
Q ss_pred CCCChhhHHHHHHHhCCcEEEecHHHHHHH
Q 007319 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 430 ~~~~~~~~~~~i~~~~it~~~~~Ps~l~~l 459 (608)
.......+...+++.++.+++..+.....+
T Consensus 131 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 131 IQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 666778899999999999998877665544
No 53
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=70.81 E-value=16 Score=38.46 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=69.9
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. +.+| -.+|++.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 35 ~p~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~la~~~~Gav~vpl~~ 106 (536)
T 3ni2_A 35 HSSKPCLIN---GANG----DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFV-LAFLGASHRGAIITAANP 106 (536)
T ss_dssp STTSEEEEE---TTTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCceEEEE---CCCC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCCEEeccCC
Confidence 467787654 2222 3578887754433 3334568999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l~~ 458 (608)
......+...+++.++.++...+.....
T Consensus 107 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 134 (536)
T 3ni2_A 107 FSTPAELAKHAKASRAKLLITQACYYEK 134 (536)
T ss_dssp TCCHHHHHHHHHHHTEEEEEECGGGTHH
T ss_pred CCCHHHHHHHHHhcCCEEEEEChHHHHH
Confidence 6778889999999999999887654443
No 54
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=69.31 E-value=28 Score=36.15 Aligned_cols=98 Identities=9% Similarity=-0.032 Sum_probs=68.8
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHH---hhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++.. .+ +..+|++.+...+.. .....++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 15 ~p~~~a~~~~---~~----~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 86 (504)
T 1t5h_X 15 APDHCALAVP---AR----GLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVV-IAILALHRLGAVPALLNP 86 (504)
T ss_dssp CTTSEEEEET---TT----TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHH-HHHHHHHHHTCEEEEECT
T ss_pred CCCceEEEEc---CC----CceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCcEEEecCC
Confidence 4567777642 11 246888877554433 334468999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEe--cHHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGT--VPSLVKAW 459 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~--~Ps~l~~l 459 (608)
....+++...+++.+++.+.. .+.....+
T Consensus 87 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 87 RLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred ccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 677788999999999999888 55554444
No 55
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=66.66 E-value=36 Score=34.79 Aligned_cols=104 Identities=14% Similarity=0.042 Sum_probs=71.6
Q ss_pred CCCCeEEEEecc--CCCCCCcEEEeCCchhHHHHHHhh---hhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEe
Q 007319 354 PVDAVVNILFSS--GTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (608)
Q Consensus 354 ~~~d~a~ii~TS--GTTG~PKgV~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~ 428 (608)
.|+.+|++.... +.+| ....+|++.+...+.... ...+. ++|++...++-+.... ..+++++..|+..+.+
T Consensus 37 ~pd~~Al~~~~~~~~~~g--~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl 112 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDG--VAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYV-VAFLGALQAGRIAVPL 112 (480)
T ss_dssp STTSEEEEEEETTTCTTC--EEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHH-HHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEecccCCCCC--ceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHH-HHHHHHHHhCcEEEee
Confidence 467888776542 2222 346788888765544433 33455 8999988777665432 4467889999999988
Q ss_pred CC---CCChhhHHHHHHHhCCcEEEecHHHHHHHHh
Q 007319 429 QG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRN 461 (608)
Q Consensus 429 ~~---~~~~~~~~~~i~~~~it~~~~~Ps~l~~l~~ 461 (608)
+. ....+++...+++.++.+++..+.....+.+
T Consensus 113 ~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 113 SVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 64 3345788899999999999998877665543
No 56
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=66.51 E-value=28 Score=37.54 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=69.2
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.++.+|++.. +..+| ....+|++.+...+. ......++.++|++..+++-+.... ..+++++..|+..+.++.
T Consensus 89 ~pd~~Al~~~-~~~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~v-va~lA~~~~Gav~vpl~~ 164 (652)
T 1pg4_A 89 NGDRTAIIWE-GDDTS--QSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAA-VAMLACARIGAVHSVIFG 164 (652)
T ss_dssp HTTSEEEEEE-CSSTT--CEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCceEEEEE-cCCCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHcCcEEEecCC
Confidence 3577787643 22222 245688887755443 3334568999999999888775443 446788999999999887
Q ss_pred CCChhhHHHHHHHhCCcEEEecH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~P 453 (608)
...+..+...+++.++.++++..
T Consensus 165 ~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 165 GFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCHHHHHHHHHhcCCCEEEEcC
Confidence 77888999999999999888753
No 57
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=65.91 E-value=35 Score=35.47 Aligned_cols=95 Identities=8% Similarity=-0.016 Sum_probs=68.9
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++.. | +...+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 29 ~p~~~A~~~~--~-----~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 100 (517)
T 3r44_A 29 SPRLQAYVEP--S-----TDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFC-CLFYGAAKLGAVAVPINT 100 (517)
T ss_dssp STTSEEEEEG--G-----GTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCCeEEEeC--C-----cCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHH-HHHHHHHHhCcEEEecCc
Confidence 4577776643 1 224688887755443 3334568999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l 456 (608)
.....++...+++.++.++...+...
T Consensus 101 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (517)
T 3r44_A 101 RLAAPEVSFILSDSGSKVVIYGAPSA 126 (517)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGH
T ss_pred ccCHHHHHHHHHhcCceEEEECCchH
Confidence 67778899999999999988766543
No 58
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=65.35 E-value=28 Score=36.77 Aligned_cols=96 Identities=8% Similarity=-0.049 Sum_probs=69.5
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHH---hhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. . +-.+|++.+...+.. .....++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 52 ~p~~~Al~~-~--------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~ 121 (563)
T 1amu_A 52 RPNNVAIVC-E--------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLF-IGILAVLKAGGAYVPIDI 121 (563)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEe-C--------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHhCCEEEEeCC
Confidence 457777653 1 235788777544433 334468999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l~~l 459 (608)
......+...+++.++.+++..+.....+
T Consensus 122 ~~~~~~l~~il~~~~~~~li~~~~~~~~~ 150 (563)
T 1amu_A 122 EYPKERIQYILDDSQARMLLTQKHLVHLI 150 (563)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred CCcHHHHHHHHHhcCCCEEEEcCchhhhh
Confidence 67778899999999999999887655443
No 59
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=64.59 E-value=31 Score=36.58 Aligned_cols=95 Identities=11% Similarity=0.042 Sum_probs=69.4
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++.... .| ....+|.+.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 69 ~pd~~Al~~~~~--~g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~-~~~lA~~~~Gav~vpl~~ 143 (580)
T 3etc_A 69 SPEKLAMIWCDD--YG--NEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFW-YCMLGLHKLGAIAVPATH 143 (580)
T ss_dssp CTTCEEEEEEES--SS--CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEEEcC--CC--CEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHhCCEEEEeCCc
Confidence 568888876532 12 346788887754433 3334568999999998887765432 346788999999998876
Q ss_pred CCChhhHHHHHHHhCCcEEEecH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~P 453 (608)
......+...+++.++.++...+
T Consensus 144 ~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 144 MLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp TCCHHHHHHHHHHHTCCEEEEES
T ss_pred cCCHHHHHHHHHhcCCCEEEEec
Confidence 67788999999999999988754
No 60
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=63.98 E-value=33 Score=37.09 Aligned_cols=97 Identities=13% Similarity=0.041 Sum_probs=70.2
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHH---HHhhh-hcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~---~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~ 429 (608)
.++.+|++... ..+| .+..+|++.+...+ ..... ..++.++|++..++|-+.... ..+++++..|+..+.++
T Consensus 95 ~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v-~a~lA~~~~Gav~vpl~ 170 (663)
T 1ry2_A 95 TPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAI-ITLLAISRIGAIHSVVF 170 (663)
T ss_dssp CTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHH-HHHHHHHHTTCEEEECC
T ss_pred CCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEeeC
Confidence 45777876542 2222 23468887765443 33334 678999999999888775533 44678899999999988
Q ss_pred CCCChhhHHHHHHHhCCcEEEecHH
Q 007319 430 GSPLERSFGKFVQDAGVTVLGTVPS 454 (608)
Q Consensus 430 ~~~~~~~~~~~i~~~~it~~~~~Ps 454 (608)
....+..+...|++.++.++++...
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 171 AGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCHHHHHHHHHhcCCeEEEEccc
Confidence 7778889999999999999888653
No 61
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=62.05 E-value=27 Score=36.31 Aligned_cols=80 Identities=15% Similarity=0.096 Sum_probs=61.1
Q ss_pred EeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEe
Q 007319 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (608)
Q Consensus 375 ~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~ 451 (608)
.+|++.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++......++...+++.++.++..
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~ 106 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEAL-VLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVC 106 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHH-HHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 578887755443 3334568999999988887765433 446788999999999886777889999999999999988
Q ss_pred cHHH
Q 007319 452 VPSL 455 (608)
Q Consensus 452 ~Ps~ 455 (608)
.+..
T Consensus 107 ~~~~ 110 (503)
T 4fuq_A 107 DPSK 110 (503)
T ss_dssp CGGG
T ss_pred Cchh
Confidence 7643
No 62
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=59.60 E-value=68 Score=33.81 Aligned_cols=101 Identities=9% Similarity=0.018 Sum_probs=71.7
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++....+ .+-.+|++.+...+. ......++.++|++...++-+... +..+++++..|+..+.++.
T Consensus 24 ~p~~~a~~~~~~~-----~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 97 (590)
T 3kxw_A 24 SPNKKSCTFLNKE-----LEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPL-IQAFLGCLYAGCIAVPIYP 97 (590)
T ss_dssp CTTSEEEEEEETT-----EEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEECC
T ss_pred CCCCeEEEEEcCC-----eeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHHHHHhCcEEEEecC
Confidence 4677887655411 345788887755443 333456899999998888776543 2446788999999998864
Q ss_pred CC---ChhhHHHHHHHhCCcEEEecHHHHHHHH
Q 007319 431 SP---LERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (608)
Q Consensus 431 ~~---~~~~~~~~i~~~~it~~~~~Ps~l~~l~ 460 (608)
.. ....+...++..++.++...+.....+.
T Consensus 98 ~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 130 (590)
T 3kxw_A 98 PAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFT 130 (590)
T ss_dssp CCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHC
T ss_pred CCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 33 2356788899999999999888776654
No 63
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=59.07 E-value=33 Score=35.76 Aligned_cols=95 Identities=6% Similarity=-0.076 Sum_probs=68.4
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++.. | ..+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 36 ~p~~~A~~~~--~-------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~vpl~~ 105 (529)
T 2v7b_A 36 RAGKTAYIDD--T-------GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALP-VAFLGALYAGVVPVVANT 105 (529)
T ss_dssp GTTSEEEECS--S-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHH-HHHHHHHHHTCEEEECCT
T ss_pred cCCceEEEeC--C-------CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHHcCceEEecCc
Confidence 4567776531 1 3578877654443 3334568999999988887765433 446788999999998886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l~~ 458 (608)
...+..+...+++.++..++..+.....
T Consensus 106 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 133 (529)
T 2v7b_A 106 LLTPADYVYMLTHSHARAVIASGALVQN 133 (529)
T ss_dssp TCCHHHHHHHHHHHTCSEEEEEGGGHHH
T ss_pred ccCHHHHHHHHhccCCeEEEechhhhhH
Confidence 6778889999999999998887765433
No 64
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=58.61 E-value=42 Score=35.42 Aligned_cols=92 Identities=17% Similarity=0.122 Sum_probs=67.3
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. . +-.+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 88 ~pd~~A~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~vpl~~ 157 (570)
T 4gr5_A 88 APDAVALLH-E--------ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMV-VALLAVLKAGGGYTMLDP 157 (570)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEC-C--------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHHCCEEEEcCC
Confidence 467777663 1 23578877754443 3334568999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSL 455 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~ 455 (608)
.....++...+++.++.++......
T Consensus 158 ~~~~~~l~~~l~~~~~~~~i~~~~~ 182 (570)
T 4gr5_A 158 QFPVERLALSLEDTGAPLLVTSRPL 182 (570)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECTTT
T ss_pred CChHHHHHHHHHhcCCCEEEecchh
Confidence 6778899999999999998886643
No 65
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=58.21 E-value=41 Score=35.22 Aligned_cols=90 Identities=13% Similarity=0.050 Sum_probs=65.9
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++- + +-.+|++.+...+. ......++.++|++...++-+.... ..+++++..|+..+.++.
T Consensus 43 ~p~~~Al~~---~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~-~~~lA~~~~Gav~vpl~~ 112 (544)
T 3o83_A 43 HPHSLAIIC---G------ERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFY-IVFFALLKAGVVVLNALY 112 (544)
T ss_dssp CTTSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCceEEEc---C------CCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEecCCC
Confidence 467788763 1 34688887754443 3334568999999988887665433 446788999999888776
Q ss_pred CCChhhHHHHHHHhCCcEEEecH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~P 453 (608)
......+...+++.++.++...+
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~ 135 (544)
T 3o83_A 113 SHRQYELNAFIKQIQPKLLIGSR 135 (544)
T ss_dssp TCCHHHHHHHHHHHCCSEEEEET
T ss_pred CCCHHHHHHHHHhcCeeEEEEcc
Confidence 66778899999999999988765
No 66
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=57.99 E-value=25 Score=34.65 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=64.8
Q ss_pred CCCcEEEEEecCCCCCCCc--EEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEEec
Q 007319 189 EDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVSI 263 (608)
Q Consensus 189 ~pd~~Av~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~--s~e~iva~lA~~kaGa~~vpl 263 (608)
.++.+|.+..-.+. .|.. ..+|.+.+...+..+++.+... +.++|++..++|- ..--+...++++..|+.+++.
T Consensus 89 ~~~~~a~i~~TSGT-TG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~ 167 (369)
T 3hgu_A 89 PADSHPQVYESGGT-TGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSI 167 (369)
T ss_dssp CTTCCCEEEEECC----CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECC
T ss_pred CccccEEEEECCCC-CCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECc
Confidence 34565554432221 2222 3578888888887777777777 8999999999886 333344455568999966654
Q ss_pred CCCCCHH-----------------------HHHHHHHhcCceEEEeecc
Q 007319 264 ADSFAAR-----------------------EIATRLRVSKAKGIFTQDF 289 (608)
Q Consensus 264 ~~~~~~~-----------------------~l~~~l~~~~~~~ii~~~~ 289 (608)
+ +.+. ++...+++.++.++++.+.
T Consensus 168 ~--~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps 214 (369)
T 3hgu_A 168 D--IDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPP 214 (369)
T ss_dssp C--CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHH
T ss_pred c--CChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHH
Confidence 3 3444 6666889999999988764
No 67
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=57.48 E-value=35 Score=35.87 Aligned_cols=84 Identities=7% Similarity=-0.059 Sum_probs=63.1
Q ss_pred EEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEE
Q 007319 374 IPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (608)
Q Consensus 374 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~ 450 (608)
..+|++.+...+... ....++.++|++...++-+.... ..+++++..|+..+.++.....+++...+++.++.+++
T Consensus 51 ~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi 129 (548)
T 2d1s_A 51 VDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFF-IPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVF 129 (548)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTH-HHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEE
T ss_pred CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHH-HHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEE
Confidence 357887775544333 34468999999988887765433 44678899999999998667788999999999999998
Q ss_pred ecHHHHHH
Q 007319 451 TVPSLVKA 458 (608)
Q Consensus 451 ~~Ps~l~~ 458 (608)
..+.....
T Consensus 130 ~~~~~~~~ 137 (548)
T 2d1s_A 130 SSKKGLDK 137 (548)
T ss_dssp ECTTTHHH
T ss_pred EcHHHHHH
Confidence 87665443
No 68
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=52.81 E-value=50 Score=34.55 Aligned_cols=90 Identities=13% Similarity=0.040 Sum_probs=65.1
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHH---hhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. + +..+|++.+...+.. .....++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 38 ~p~~~A~~~---~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~Ga~~vpl~~ 107 (539)
T 1mdb_A 38 YGDRIAITC---G------NTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFF-EVIFALFRLGALPVFALP 107 (539)
T ss_dssp HTTSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHH-HHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEe---C------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHHcCeEEecCCC
Confidence 356777653 1 246788777554433 334468999999988887665433 446788999999888876
Q ss_pred CCChhhHHHHHHHhCCcEEEecH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~P 453 (608)
......+...+++.++.+++..+
T Consensus 108 ~~~~~~l~~~l~~~~~~~vi~~~ 130 (539)
T 1mdb_A 108 SHRSSEITYFCEFAEAAAYIIPD 130 (539)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEES
T ss_pred CCCHHHHHHHHHhCCCCEEEecc
Confidence 66778899999999999988764
No 69
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=50.04 E-value=50 Score=37.62 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=69.5
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. +.+| ..+|++.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++.
T Consensus 74 ~pd~~Al~~---~~~~----~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~-v~~lA~~~~Ga~~vpl~~ 145 (979)
T 3tsy_A 74 FATKPCLIN---GPTG----HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFV-LSFLAASFRGATATAANP 145 (979)
T ss_dssp TTTSEEEEE---TTTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHH-HHHHHHHHHTCEEEEECT
T ss_pred CCCCeEEEE---CCCC----cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHH-HHHHHHHHcCCEEEeeCC
Confidence 467888764 2222 4578877654433 3334568999999988887765432 446788999999999987
Q ss_pred CCChhhHHHHHHHhCCcEEEecHHHH
Q 007319 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~Ps~l 456 (608)
...++.+...+++.++.+++..+...
T Consensus 146 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 171 (979)
T 3tsy_A 146 FFTPAEIAKQAKASNTKLIITEARYV 171 (979)
T ss_dssp TSCHHHHHHHHHHHTEEEEEECSTTT
T ss_pred CCCHHHHHHHHHHcCCeEEEEChHHH
Confidence 77788999999999999998876543
No 70
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=49.70 E-value=44 Score=34.49 Aligned_cols=78 Identities=5% Similarity=-0.049 Sum_probs=59.1
Q ss_pred EeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecH
Q 007319 375 PWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 375 ~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~P 453 (608)
.+|++.+...+......+.-.++|++...++-+.... ..+++++..|+..+.++.......+...+++.++.+++...
T Consensus 26 ~~Ty~eL~~~~~~lA~~L~~~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 103 (501)
T 3ipl_A 26 SYTYQNLYCEASLLAKRLKAYQQSRVGLYIDNSIQSI-ILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTL 103 (501)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTCCSEEEEECCSSHHHH-HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESS
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcc
Confidence 5888887766655555443338999988887765433 44678899999999988677788999999999999887653
No 71
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=46.87 E-value=59 Score=33.64 Aligned_cols=89 Identities=8% Similarity=-0.076 Sum_probs=63.2
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++. . +-.+|++.+...+... ....++.++|++...++-+... +..+++++..|+..+.++.
T Consensus 14 ~p~~~A~~~-~--------~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~vpl~~ 83 (512)
T 3fce_A 14 TPDQTAFVW-R--------DAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEM-IINFLGCVKAGHAYIPVDL 83 (512)
T ss_dssp STTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHH-HHHHHHHHHTTCCEEEEET
T ss_pred CCCceEEEe-C--------CceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEeeCC
Confidence 456777653 1 1257887775544333 3445789999988877665432 2446788999999999876
Q ss_pred CCChhhHHHHHHHhCCcEEEec
Q 007319 431 SPLERSFGKFVQDAGVTVLGTV 452 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~ 452 (608)
....+.+...+++.++.++...
T Consensus 84 ~~~~~~l~~il~~~~~~~~i~~ 105 (512)
T 3fce_A 84 SIPADRVQRIAENSGAKLLLSA 105 (512)
T ss_dssp TSCHHHHHHHHHHSCCCEEEES
T ss_pred CCcHHHHHHHHHhcCCCEEEec
Confidence 6677889999999999888764
No 72
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=46.00 E-value=61 Score=31.72 Aligned_cols=93 Identities=16% Similarity=0.185 Sum_probs=64.9
Q ss_pred CCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCC
Q 007319 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF 267 (608)
Q Consensus 189 ~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~ 267 (608)
.+-++-+..++-+ . +=||+. +-..+.+.....+- +++|.+..+....+=.-+..-++|.+.|.-++.+-|..
T Consensus 48 ~G~~IylK~E~ln----p--tGSfK~-RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~ 120 (344)
T 3vc3_A 48 CGAYVAVKQEMMQ----P--TASIAD-RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSY 120 (344)
T ss_dssp CCSEEEEEEGGGS----T--TSBTTH-HHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred hCCEEEEEecCCC----C--CCCcHH-HHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCC
Confidence 3445666655431 0 234443 22234555555555 88888766777777777888889999999888777877
Q ss_pred CHHHHHHHHHhcCceEEEeec
Q 007319 268 AAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 268 ~~~~l~~~l~~~~~~~ii~~~ 288 (608)
.+......++..++++++++.
T Consensus 121 ~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 121 TSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp SCHHHHHHHHHTTCEEEEECG
T ss_pred ChHHHHHHHHHcCCEEEEECC
Confidence 777778889999999999875
No 73
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=45.08 E-value=1.7e+02 Score=26.20 Aligned_cols=89 Identities=9% Similarity=-0.116 Sum_probs=52.0
Q ss_pred cEEEEeccc--cccchhHHhHHH-HHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEe------cHHH--HHHHHhcCcCC
Q 007319 398 DVYCWPTNL--GWVMGPVILFSS-FLNGATLALYQGSPLERSFGKFVQDAGVTVLGT------VPSL--VKAWRNTNCLE 466 (608)
Q Consensus 398 d~~l~~~~~--~~~~~~~~~~~~-l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~------~Ps~--l~~l~~~~~~~ 466 (608)
.+++..++- .|+.|...+-.. -.+|..++....+..++.+.+.+.++++..+.+ ++++ +..+.+.....
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~ 172 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEE 172 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHT
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHc
Confidence 344444433 378887543333 346777776654567889999999999997776 2322 22222221111
Q ss_pred CCCC-ccccEEEeecCCCChhhhH
Q 007319 467 GLDW-TKIRSFASTGETSNVDDDL 489 (608)
Q Consensus 467 ~~~l-~~Lr~i~~gGe~l~~~~~~ 489 (608)
.+ .+++ +++||.+++++..+
T Consensus 173 --~~~~~v~-v~vGG~~~~~~~a~ 193 (215)
T 3ezx_A 173 --KLRDSVK-CMFGGAPVSDKWIE 193 (215)
T ss_dssp --TCGGGSE-EEEESSSCCHHHHH
T ss_pred --CCCCCCE-EEEECCCCCHHHHH
Confidence 11 1343 67899998876444
No 74
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=41.03 E-value=1.5e+02 Score=31.00 Aligned_cols=97 Identities=12% Similarity=0.077 Sum_probs=65.0
Q ss_pred CCCCeEEEEeccCCCCCCc--EEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEe
Q 007319 354 PVDAVVNILFSSGTTGEPK--AIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PK--gV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~ 428 (608)
.|+.+|++.. .|..+..+ .-.+|++.+...+... ....++ ++|++...++-+.... ..+++++..|+..+.+
T Consensus 33 ~p~~~A~~~~-~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~-~~~lA~~~~Gav~vpl 109 (562)
T 3ite_A 33 HPEWKAVEVA-TGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAF-AIIVGIMKSGNTYVPI 109 (562)
T ss_dssp CTTSEEEEEE-ECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHH-HHHHHHHHTTCEEEEC
T ss_pred CCCchhhhcc-cccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHH-HHHHHHHHhCCEEEec
Confidence 4677777644 33333332 3567888775444333 334567 7999988887765433 3467889999999998
Q ss_pred CCCCChhhHHHHHHHhCCcEEEecH
Q 007319 429 QGSPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 429 ~~~~~~~~~~~~i~~~~it~~~~~P 453 (608)
+.......+...+++.++.+++...
T Consensus 110 ~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 110 EAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred CCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 8667778899999999999877653
No 75
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=39.58 E-value=1e+02 Score=32.88 Aligned_cols=89 Identities=4% Similarity=-0.152 Sum_probs=63.9
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~ 430 (608)
.|+.+|++- . .-.+|++.+...+. ......++.++|++...++-+...- ..+++.+..|+..+.++.
T Consensus 40 ~Pd~~Av~~-~--------~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~v-va~lailkaGa~~vpld~ 109 (620)
T 4dg8_A 40 HPHREAIRD-R--------FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESI-TCLLAILLSGHHYLYIDL 109 (620)
T ss_dssp CTTSEEEEE-T--------TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHH-HHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEc-C--------CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHhCCEEEeeCc
Confidence 467777653 1 12578887754443 3334468999999988887765433 446788999999999886
Q ss_pred CCChhhHHHHHHHhCCcEEEec
Q 007319 431 SPLERSFGKFVQDAGVTVLGTV 452 (608)
Q Consensus 431 ~~~~~~~~~~i~~~~it~~~~~ 452 (608)
.....++..++++.++.++...
T Consensus 110 ~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 110 KQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp TSCHHHHHHHHHHHTEEEEEEC
T ss_pred cChHHHHHHHHHhCCCcEEEec
Confidence 6677888899999999888744
No 76
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=38.86 E-value=1.3e+02 Score=29.20 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=58.3
Q ss_pred CcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCH
Q 007319 191 NTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAA 269 (608)
Q Consensus 191 d~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~ 269 (608)
.++-+..++-+ . +-||+.- .....+.....+- +++|+.|.+....+=.-....+++.+.|.-++.+-|...+
T Consensus 35 ~~i~~K~E~~~----p--tGSfK~R-~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~ 107 (334)
T 3tbh_A 35 AKVVLKMECEN----P--MASVKDR-LGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMS 107 (334)
T ss_dssp SEEEEEEGGGS----T--TSBTHHH-HHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSC
T ss_pred CEEEEEeCCCC----C--ccCcHHH-HHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCC
Confidence 45556555432 1 2345543 1223344444444 6889886555555666677777888889877766666655
Q ss_pred HHHHHHHHhcCceEEEeecc
Q 007319 270 REIATRLRVSKAKGIFTQDF 289 (608)
Q Consensus 270 ~~l~~~l~~~~~~~ii~~~~ 289 (608)
......++..++++++++..
T Consensus 108 ~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 108 LERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHHHCCCEEEEECCC
Confidence 66677889999999999753
No 77
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=37.29 E-value=1.2e+02 Score=31.63 Aligned_cols=86 Identities=9% Similarity=-0.027 Sum_probs=62.3
Q ss_pred EEEeCCchhHHHHHHh---hhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCC-------hhhHHHHHH
Q 007319 373 AIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQ 442 (608)
Q Consensus 373 gV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~-------~~~~~~~i~ 442 (608)
+-.+|++.+...+... ....++.++|++...++-+.... ..+++++..|+..+.++.... ...+...++
T Consensus 47 ~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~ 125 (576)
T 3gqw_A 47 EDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFV-EAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLA 125 (576)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHH-HHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHH
T ss_pred eeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHH
Confidence 4568888775544333 34568999999998887765433 446788999999998864433 467888899
Q ss_pred HhCCcEEEecHHHHHHH
Q 007319 443 DAGVTVLGTVPSLVKAW 459 (608)
Q Consensus 443 ~~~it~~~~~Ps~l~~l 459 (608)
..++..+.........+
T Consensus 126 ~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 126 SCQPAAIITGDEWLPLV 142 (576)
T ss_dssp HHCCSEEEECGGGHHHH
T ss_pred hcCCCEEEecHHHHHHH
Confidence 99999999877655444
No 78
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=37.10 E-value=68 Score=33.20 Aligned_cols=79 Identities=8% Similarity=-0.112 Sum_probs=58.6
Q ss_pred EEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEE
Q 007319 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (608)
Q Consensus 374 V~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~ 450 (608)
-.+|++.+...+. ......++.++|++...++-+... +..+++++..|+..+.++.....+.+...+++.++.+++
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii 106 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDM-LATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLII 106 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHH-HHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEE
T ss_pred CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEE
Confidence 3478877754443 333456889999988877766433 244678899999999887667778999999999999887
Q ss_pred ecH
Q 007319 451 TVP 453 (608)
Q Consensus 451 ~~P 453 (608)
...
T Consensus 107 ~~~ 109 (521)
T 3l8c_A 107 AIE 109 (521)
T ss_dssp ESS
T ss_pred ecC
Confidence 654
No 79
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=36.94 E-value=1.1e+02 Score=29.65 Aligned_cols=69 Identities=22% Similarity=0.200 Sum_probs=43.1
Q ss_pred cCCCCEEEEEcCCCH------HHHHHHHHHH-HhCCEEEecCCCC------------CHHHHHHHHHhcCceEEEeecce
Q 007319 230 FSKGDAIAIDMPMTV------RAVIIYLAII-LAGYVVVSIADSF------------AAREIATRLRVSKAKGIFTQDFI 290 (608)
Q Consensus 230 v~~gd~Vai~~~~s~------e~iva~lA~~-kaGa~~vpl~~~~------------~~~~l~~~l~~~~~~~ii~~~~~ 290 (608)
+++||+|+|++|.+. +.+-.-+..+ ..|.-++.-..-. ..+++..++.+-..++|++....
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 799999999999752 3333333433 3465554332211 24567778889999999998755
Q ss_pred eecCcccC
Q 007319 291 LRGGRKFP 298 (608)
Q Consensus 291 ~~~~~~~~ 298 (608)
....+.++
T Consensus 89 ~g~~rlL~ 96 (327)
T 4h1h_A 89 FNSNQLLP 96 (327)
T ss_dssp SCGGGGGG
T ss_pred hhHHHHhh
Confidence 43333333
No 80
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=35.90 E-value=1.1e+02 Score=32.55 Aligned_cols=89 Identities=11% Similarity=0.015 Sum_probs=65.0
Q ss_pred CCCeEEEEeccCCCCCCcEEEeCCchhHHHHH---HhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCC
Q 007319 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (608)
Q Consensus 355 ~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~ 431 (608)
|+.+|.+- | +-.+|++.+...+. ......++.++|++...++-+...- ..+++++..|+..+.++..
T Consensus 39 pd~~Av~~---~------~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~v-va~lA~l~aG~~~vpl~~~ 108 (617)
T 3rg2_A 39 SDSIAVID---G------ERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELY-ITFFALLKLGVAPVLALFS 108 (617)
T ss_dssp CCSEEEEE---T------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHH-HHHHHHHHHTCEEEEECTT
T ss_pred CCCeEEec---C------CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhcCeEEccCCcc
Confidence 57777762 1 23578887754443 3334568999999988887765433 4467899999999988766
Q ss_pred CChhhHHHHHHHhCCcEEEecH
Q 007319 432 PLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 432 ~~~~~~~~~i~~~~it~~~~~P 453 (608)
....++...+++.++.++....
T Consensus 109 ~~~~~l~~~l~~~~~~~vl~~~ 130 (617)
T 3rg2_A 109 HQRSELNAYASQIEPALLIADR 130 (617)
T ss_dssp CCHHHHHHHHHHHCCSEEEEET
T ss_pred ccHHHHHHHHhhcCceEEEecc
Confidence 6778899999999999888754
No 81
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=34.86 E-value=1.1e+02 Score=31.56 Aligned_cols=89 Identities=12% Similarity=-0.045 Sum_probs=61.9
Q ss_pred CCCCeEEEEeccCCCCCCcEEEeCCchhHHHHHHhhhh----cCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeC
Q 007319 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (608)
Q Consensus 354 ~~~d~a~ii~TSGTTG~PKgV~~sh~~~~~~~~~~~~~----~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~ 429 (608)
.|+.+|++- .+-.+|++.+...+...... .+..+++++....+-+... +..+++++..|+..+.++
T Consensus 14 ~p~~~Al~~---------~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~vpl~ 83 (511)
T 3e7w_A 14 YPQTDAFRS---------QGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHM-IVSFLGSVKAGHPYIPVD 83 (511)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHH-HHHHHHHHHHTCCEEEEE
T ss_pred CCCCeEEEc---------CCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHH-HHHHHHHHHhCCEEEecC
Confidence 356777652 12468888776554443332 4556778887776655332 344678899999999987
Q ss_pred CCCChhhHHHHHHHhCCcEEEec
Q 007319 430 GSPLERSFGKFVQDAGVTVLGTV 452 (608)
Q Consensus 430 ~~~~~~~~~~~i~~~~it~~~~~ 452 (608)
.....+.+...+++.+++++...
T Consensus 84 ~~~~~~~l~~~l~~~~~~~li~~ 106 (511)
T 3e7w_A 84 LSIPSERIAKIIESSGAELLIHA 106 (511)
T ss_dssp TTSCHHHHHHHHHHHTCCEEEES
T ss_pred CCChHHHHHHHHHhCCCCEEEec
Confidence 67778899999999999988863
No 82
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.64 E-value=1.6e+02 Score=28.54 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=44.7
Q ss_pred cCCCCEEEEEcCCCH------HHHHHHHHHHH-hCCEEEecCCCC-------------CHHHHHHHHHhcCceEEEeecc
Q 007319 230 FSKGDAIAIDMPMTV------RAVIIYLAIIL-AGYVVVSIADSF-------------AAREIATRLRVSKAKGIFTQDF 289 (608)
Q Consensus 230 v~~gd~Vai~~~~s~------e~iva~lA~~k-aGa~~vpl~~~~-------------~~~~l~~~l~~~~~~~ii~~~~ 289 (608)
+++||+|+|++|.+. +-+-.-...++ .|.-++. .+.. ..+++..++.+-.+++|++...
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~-~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTF-STHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEE-CTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE-CCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 799999999998864 33434444454 5666554 3321 2456677888889999999876
Q ss_pred eeecCcccCc
Q 007319 290 ILRGGRKFPL 299 (608)
Q Consensus 290 ~~~~~~~~~~ 299 (608)
.....+.++.
T Consensus 88 G~g~~rlL~~ 97 (331)
T 4e5s_A 88 GYNSNGLLKY 97 (331)
T ss_dssp CSCGGGGGGG
T ss_pred cccHHHHHhh
Confidence 5443334443
No 83
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=29.59 E-value=1.6e+02 Score=29.09 Aligned_cols=70 Identities=14% Similarity=0.087 Sum_probs=44.8
Q ss_pred cCCCCEEEEEcCCCH------HHHHHHHHHHH-hCCEEEecCCC---------C---CHHHHHHHHHhcCceEEEeecce
Q 007319 230 FSKGDAIAIDMPMTV------RAVIIYLAIIL-AGYVVVSIADS---------F---AAREIATRLRVSKAKGIFTQDFI 290 (608)
Q Consensus 230 v~~gd~Vai~~~~s~------e~iva~lA~~k-aGa~~vpl~~~---------~---~~~~l~~~l~~~~~~~ii~~~~~ 290 (608)
+++||+|+|++|.+. +-+-.-+..++ .|.-++.-... . ..+++..++.+-.+++|+|....
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 899999999999874 33333344444 56665543221 1 24566777888899999998765
Q ss_pred eecCcccCc
Q 007319 291 LRGGRKFPL 299 (608)
Q Consensus 291 ~~~~~~~~~ 299 (608)
....+.++.
T Consensus 120 yga~rlLp~ 128 (371)
T 3tla_A 120 DNSNSLLPF 128 (371)
T ss_dssp SCGGGGGGG
T ss_pred ccHHHHHhh
Confidence 544444443
No 84
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=28.84 E-value=2.3e+02 Score=28.44 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=35.5
Q ss_pred cCCCCEEEEEcCCCHHHHHHHH-HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYL-AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~l-A~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
+++||.|.+.-+.-......+- .+.+.|+.++.++.. ..+.++..++. +.++|+.+.
T Consensus 118 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-d~~~l~~ai~~-~t~~v~~e~ 175 (430)
T 3ri6_A 118 ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-DSLAVEHACDE-TTKLLFLET 175 (430)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHCCT-TEEEEEEES
T ss_pred hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhhCC-CCeEEEEEC
Confidence 6788888766665554444332 455677777777665 56667666654 566666543
No 85
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.13 E-value=1.5e+02 Score=28.84 Aligned_cols=69 Identities=17% Similarity=0.251 Sum_probs=44.5
Q ss_pred cCCCCEEEEEcCCCH------HHHHHHHHHHH-hCCEEEecCCCC-------------CHHHHHHHHHhcCceEEEeecc
Q 007319 230 FSKGDAIAIDMPMTV------RAVIIYLAIIL-AGYVVVSIADSF-------------AAREIATRLRVSKAKGIFTQDF 289 (608)
Q Consensus 230 v~~gd~Vai~~~~s~------e~iva~lA~~k-aGa~~vpl~~~~-------------~~~~l~~~l~~~~~~~ii~~~~ 289 (608)
+++||+|+|++|.+. +.+-.-+..++ .|.-++. .+.. ..+++..++.+-.+++|+|...
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~-~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE-GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE-CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE-cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 899999999999883 23333344444 5666554 3221 2456677888899999999876
Q ss_pred eeecCcccCc
Q 007319 290 ILRGGRKFPL 299 (608)
Q Consensus 290 ~~~~~~~~~~ 299 (608)
.....+.++.
T Consensus 89 G~g~~rlL~~ 98 (336)
T 3sr3_A 89 GMNSNSLLPY 98 (336)
T ss_dssp CSCGGGGGGG
T ss_pred cccHHHHhhh
Confidence 5443344443
No 86
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=25.17 E-value=2.3e+02 Score=27.38 Aligned_cols=56 Identities=18% Similarity=0.125 Sum_probs=41.3
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCC-------CCHHHHHHHHHhcCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-------FAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~-------~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
+++||.|.+..+....+. -++...|+.++.++.. ...+.++..+++.++++|+...
T Consensus 106 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMFY---SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp SCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCeEEECCCCcHHHH---HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 679999988777766544 3456788887776653 6789999999867788776543
No 87
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=25.13 E-value=1.8e+02 Score=28.50 Aligned_cols=62 Identities=15% Similarity=0.013 Sum_probs=42.0
Q ss_pred HHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCC-----CCCHHHHHHHHHhcC--ceEEEee
Q 007319 223 ANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD-----SFAAREIATRLRVSK--AKGIFTQ 287 (608)
Q Consensus 223 A~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~-----~~~~~~l~~~l~~~~--~~~ii~~ 287 (608)
...|... +++||.|.+-.+....+. -++...|+.++.++. ....+.++..+...+ .++|+..
T Consensus 67 ~~al~~l~~~~Gd~Vi~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 67 MAAIQLKKRKKGKYALMPSFTFPATP---LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHHHHSCTTCCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHHHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 3345566 899999998877766544 345678987665543 246888888775444 7777644
No 88
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=24.17 E-value=1.4e+02 Score=30.80 Aligned_cols=78 Identities=10% Similarity=0.085 Sum_probs=57.0
Q ss_pred EEeCCchhHHHHHHhhhhcCCCCCcEEEEeccccccchhHHhHHHHHhCCeEEEeCCCCChhhHHHHHHHhCCcEEEecH
Q 007319 374 IPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVP 453 (608)
Q Consensus 374 V~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~~vl~~~~~~~~~~~~~i~~~~it~~~~~P 453 (608)
-.+|++.+...+......+ ..++++...++-+.... ..+++++..|+..+.++......++...+++.++.++...+
T Consensus 47 ~~~Ty~eL~~~~~~~A~~L--~~~~~V~i~~~~~~~~~-~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~ 123 (505)
T 3nyq_A 47 RSLTYAELAAAAGATAGRI--GGAGRVAVWATPAMETG-VAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPP 123 (505)
T ss_dssp EEEEHHHHHHHHHHHHTTC--C---CEEEECCSSHHHH-HHHHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECT
T ss_pred eeeeHHHHHHHHHHHHhhc--cCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECC
Confidence 4688888877666655444 46788877777664432 44678899999999998777788999999999999998765
Q ss_pred H
Q 007319 454 S 454 (608)
Q Consensus 454 s 454 (608)
.
T Consensus 124 ~ 124 (505)
T 3nyq_A 124 D 124 (505)
T ss_dssp T
T ss_pred c
Confidence 3
No 89
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=23.92 E-value=2.2e+02 Score=27.89 Aligned_cols=73 Identities=8% Similarity=0.018 Sum_probs=48.7
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeecceeecCcccCchHhHhhhC
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA 307 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 307 (608)
+++||.|.+--+....+. -++...|+.+++++. ...+.++..+++.++++|+++.-.-..+...+ ++++.+.+
T Consensus 140 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~-l~~l~~la 212 (409)
T 3kki_A 140 CQPNTNVYIDFFAHMSLW---EGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAP-LAELVNIS 212 (409)
T ss_dssp CCTTCEEEEETTSCHHHH---HHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEESBCTTTCCBCC-HHHHHHHH
T ss_pred cCCCCEEEECCCcCHHHH---HHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECCCCCCCCCcCC-HHHHHHHH
Confidence 789999998777765544 355667998888754 56888999998776788887753322233333 44444433
No 90
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=23.87 E-value=2.8e+02 Score=26.56 Aligned_cols=58 Identities=7% Similarity=-0.032 Sum_probs=39.9
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCC----CCHHHHHHHHHhcCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS----FAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~----~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
.++||.|.+..+...-+.....++...|+.++.++.. ...+.+...++. ++++|+...
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 147 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIMA 147 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEES
T ss_pred cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEEC
Confidence 4789999888777766655555556778877665442 457888887764 667776654
No 91
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=22.70 E-value=4.1e+02 Score=25.21 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=39.8
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecC--CC----CCHHHHHHHHHh----cCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA--DS----FAAREIATRLRV----SKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~--~~----~~~~~l~~~l~~----~~~~~ii~~~ 288 (608)
+++||.|.+..+.......+ +...|+.++.++ .+ ...+.++..+++ .++++++...
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 67999999988877766554 567788776665 32 367888888875 3566766654
No 92
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=22.65 E-value=3.9e+02 Score=25.85 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=42.3
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhc---CceEEEeecc
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVS---KAKGIFTQDF 289 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~---~~~~ii~~~~ 289 (608)
.++||.|.+..+....+.- ++...|+.+++++. ...+.++..++.. ++++|++..-
T Consensus 124 ~~~gd~V~~~~p~~~~~~~---~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~~ 182 (398)
T 3a2b_A 124 MGRNDYILLDERDHASIID---GSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDGI 182 (398)
T ss_dssp SCTTCEEEEETTCCHHHHH---HHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred hCCCCEEEECCccCHHHHH---HHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeCC
Confidence 7899999999887776643 35567988888765 5678899888875 6777776653
No 93
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=22.61 E-value=3.6e+02 Score=25.66 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=45.1
Q ss_pred HHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEeec
Q 007319 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 222 lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
+.....+- +++|....+....+=.-..+.+++.+.|.-++.+-|...+......++..++++++++.
T Consensus 54 l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T 1z7w_A 54 ISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDP 121 (322)
T ss_dssp HHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 44444444 77775444445555555666677789998777666655556666788999999999875
No 94
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=21.90 E-value=3.4e+02 Score=27.28 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=58.4
Q ss_pred CCCcEEEEEecCCCCCCCcEEecHHHHHHHHHHHHHHHHhc-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCC
Q 007319 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSF 267 (608)
Q Consensus 189 ~pd~~Av~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~~ 267 (608)
.+.++.+..++-+ . .-||+.- ...+.+.....+- +++|....+....+=.-...-+++.+.|.-++.+-|..
T Consensus 136 ~g~~I~lK~E~ln----p--tGSfKdR-gA~~~i~~A~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~ 208 (430)
T 4aec_A 136 CVANIAAKLEIME----P--CCSVKDR-IGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPAS 208 (430)
T ss_dssp CSSEEEEEEGGGS----T--TSBTTHH-HHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred cCCeEEEEECCCC----C--CCCHHHH-HHHHHHHHHHHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCC
Confidence 3446666665542 1 1244432 1223333333333 78886555555556666677777888998877666666
Q ss_pred CHHHHHHHHHhcCceEEEeec
Q 007319 268 AAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 268 ~~~~l~~~l~~~~~~~ii~~~ 288 (608)
.+......++..++++++++.
T Consensus 209 ~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 209 MSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp SCHHHHHHHHHTTCEEEEECG
T ss_pred CCHHHHHHHHHCCCEEEEECC
Confidence 666777788999999999974
No 95
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=21.20 E-value=2.6e+02 Score=26.77 Aligned_cols=58 Identities=17% Similarity=0.100 Sum_probs=40.4
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCC----CCHHHHHHHHHhcCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS----FAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~~----~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
.++||.|.+..+..+-+..++..+.+.|+.++.++.+ ...+.++..++. ++++++...
T Consensus 85 ~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 146 (382)
T 4hvk_A 85 ARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQH 146 (382)
T ss_dssp GGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCS
T ss_pred cCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEEC
Confidence 3799999998888887776665556678776655443 357888887764 556666654
No 96
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=20.75 E-value=3.4e+02 Score=25.95 Aligned_cols=58 Identities=12% Similarity=-0.022 Sum_probs=37.0
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCC--C--CCHHHHHHHHHhcCceEEEeec
Q 007319 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD--S--FAAREIATRLRVSKAKGIFTQD 288 (608)
Q Consensus 230 v~~gd~Vai~~~~s~e~iva~lA~~kaGa~~vpl~~--~--~~~~~l~~~l~~~~~~~ii~~~ 288 (608)
+++||.|.+.-+...-. ...-.+...|+.++.++. . ...+.++..++..++++|+...
T Consensus 74 ~~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 88999998876643221 111222356776555543 3 4688999999886778777764
Done!