BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007324
(608 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8N9|GOGC1_ARATH Golgin candidate 1 OS=Arabidopsis thaliana GN=GC1 PE=2 SV=2
Length = 707
Score = 625 bits (1611), Expect = e-178, Method: Compositional matrix adjust.
Identities = 365/618 (59%), Positives = 445/618 (72%), Gaps = 45/618 (7%)
Query: 1 MASWLKAAEDLFEVVDRRAKLVVNELADEQSDFQTPASNGQGSQAKKIKSRIKAQRRHSA 60
MASWLKAAEDLFEVVDRRAK VV +L++EQ+D Q PAS +GSQ K+ S+ +++
Sbjct: 1 MASWLKAAEDLFEVVDRRAKSVVEDLSEEQNDLQLPASGRKGSQGKRTSSK---KKKLVK 57
Query: 61 DESLKINDTAREQANTQASPVDVTPNKDTATLAVEKETITTGKTQKNGEQQQTNE--RDA 118
+ES D++ +Q+ S +V P+K + + ET ++G E T+ +
Sbjct: 58 EESSNKRDSSGDQSGPGVSQSEVPPSKSSVST---DETSSSGPVLLTREIHPTDADVQSV 114
Query: 119 PSIPLTEQSKDMSKHDADRVEIPETFTDLD---TATPNGEILNENDSDVHLNHPPSP-LP 174
S+PL+ +K D V E+ D D + +G+I NDS V PSP LP
Sbjct: 115 LSLPLSVAD---TKSDDAAVVAQESIVDGDRSESKHADGDI--PNDSLVQ----PSPSLP 165
Query: 175 PKEMGIVNEDRIDDAGQITKSADADAPLK-----IDSKIQAVDPPVNSESSLKDA--DVK 227
KE+ +V + + DA + + D K +DS + A P VN + + +VK
Sbjct: 166 DKEIEVVVSENLMDAPKNGTQRELDDSSKRDVENLDSVVHA--PSVNEGNVAQSTGDEVK 223
Query: 228 VETL---------------SNKRKQQALKADDPPTKEQDQLDEAQGLLKTTISTGQSKEA 272
V T +N +++Q +AD K QDQL+EAQGLLK T+STGQSKEA
Sbjct: 224 VGTSINLEKEQEPKVPVTSTNLKREQDRRADTTSMKIQDQLEEAQGLLKATVSTGQSKEA 283
Query: 273 RLARVCAGLSSRLQEYKSENAQLEELLVAERELSRSYEARIKQLEQELSVYKSEVTKVES 332
RLARVCAGLSSRLQE K+ENAQLEELL AE+EL++SYEA I+ L+++LS KSEVTKVES
Sbjct: 284 RLARVCAGLSSRLQEIKAENAQLEELLTAEQELTKSYEASIRHLQKDLSAAKSEVTKVES 343
Query: 333 NLAEALAAKNSEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNRELTETRMIQALR 392
++ EALAAKNSEIETLVS++DALK QAAL+EG L+SLQ +MESIMRNREL ETRM+QALR
Sbjct: 344 SMVEALAAKNSEIETLVSAMDALKNQAALNEGKLSSLQGDMESIMRNRELAETRMMQALR 403
Query: 393 EELASVERRAEEERAAHNATKMAAMEREVELEHRAAEASMALARIQRIADERTAKAGELE 452
EELA+ ERRAEEER+AHNATKMAAMERE ELEHRA +AS AL RIQRIADERTAK + E
Sbjct: 404 EELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVRIQRIADERTAKVADFE 463
Query: 453 QKVAMLEVECATLQQELQDMEARLKRGQKKSPEEANQAIQMQAWQDEVERARQGQRDAEN 512
QKVA+LE EC +L QELQDME R +RGQKK+P+EANQ IQ+QAWQDEV+RARQGQRDAE
Sbjct: 464 QKVALLEAECTSLNQELQDMEVRARRGQKKAPDEANQVIQIQAWQDEVDRARQGQRDAEE 523
Query: 513 KLSSLEAEVQKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEKA 572
KLS +EAE+QK+RVEMAAMKRDAEHYSR+EH ELEKRYRELTDLLYYKQTQLETMASEKA
Sbjct: 524 KLSLMEAEMQKLRVEMAAMKRDAEHYSRQEHTELEKRYRELTDLLYYKQTQLETMASEKA 583
Query: 573 AAEFQLEKEMNRLQEVQV 590
AAEFQLEKE+ RL E QV
Sbjct: 584 AAEFQLEKEVKRLHEAQV 601
>sp|Q5JLY8|GOGA5_ORYSJ Golgin-84 OS=Oryza sativa subsp. japonica GN=Os01g0744400 PE=2 SV=1
Length = 709
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 269/379 (70%), Positives = 316/379 (83%), Gaps = 4/379 (1%)
Query: 216 NSESSLKDADVKVETLSNK----RKQQALKADDPPTKEQDQLDEAQGLLKTTISTGQSKE 271
+++ S K D K E LS+ QQ K D K+QDQL+EA+GLLK + TGQSKE
Sbjct: 223 DTQVSGKSQDSKREGLSDSPESTENQQEHKLDSGSVKDQDQLEEARGLLKNVVKTGQSKE 282
Query: 272 ARLARVCAGLSSRLQEYKSENAQLEELLVAERELSRSYEARIKQLEQELSVYKSEVTKVE 331
ARLARVCAGLSSRLQEYKSENAQLEELLV ERE SYEA +KQL+QELS+ + E ++ E
Sbjct: 283 ARLARVCAGLSSRLQEYKSENAQLEELLVQEREKCSSYEAHMKQLQQELSMSRVEGSRAE 342
Query: 332 SNLAEALAAKNSEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNRELTETRMIQAL 391
SN+ +AL AKN+EIE+LV S+D+ KK+AA SE LA+LQ +M+ + RNRELTETR+IQAL
Sbjct: 343 SNMVDALTAKNAEIESLVKSLDSWKKKAAASEEKLAALQEDMDGLKRNRELTETRVIQAL 402
Query: 392 REELASVERRAEEERAAHNATKMAAMEREVELEHRAAEASMALARIQRIADERTAKAGEL 451
REELA+VERRAEEER AHNATKMAA+EREVELEHRA EAS ALARIQR AD+ +++A EL
Sbjct: 403 REELATVERRAEEERIAHNATKMAAVEREVELEHRAVEASNALARIQRAADQSSSRAMEL 462
Query: 452 EQKVAMLEVECATLQQELQDMEARLKRGQKKSPEEANQAIQMQAWQDEVERARQGQRDAE 511
E KVA+LEVECA+LQQELQ+MEAR +R QKK EEANQ IQMQAWQ+EVERARQ QR+AE
Sbjct: 463 EHKVAVLEVECASLQQELQEMEARNRRAQKKPSEEANQVIQMQAWQEEVERARQSQREAE 522
Query: 512 NKLSSLEAEVQKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEK 571
K+SSLEAE+QKMRVEMA MKRDAEHYSR+EH+ELEKRYRELTDLLY+KQTQLE+MASEK
Sbjct: 523 TKISSLEAELQKMRVEMAGMKRDAEHYSRQEHVELEKRYRELTDLLYHKQTQLESMASEK 582
Query: 572 AAAEFQLEKEMNRLQEVQV 590
AA EFQLEK + + EVQ+
Sbjct: 583 AALEFQLEKSIKQFHEVQM 601
>sp|Q6GNT7|GOGA5_XENLA Golgin subfamily A member 5 OS=Xenopus laevis GN=golga5 PE=2 SV=1
Length = 722
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 168/360 (46%), Gaps = 32/360 (8%)
Query: 253 LDEAQGLLKTTISTGQSKEARLARVCA----GLSSRLQEYKSENAQLEELLVAERELSRS 308
L EA LLK+ T +S + +R+ G S Q ++ +L E AE L R
Sbjct: 299 LQEADQLLKSRTETLESLQIEKSRILQDQSEGSSIHNQALQTMQERLRE---AESTLIRE 355
Query: 309 YEARIKQLEQELSVYKSEVTKVESNLAEA-LAAKNSEIETLVSSIDALKKQAALSEGNLA 367
E+ KQ++ E + S++ NLAEA + A+ +E S D L++Q S+ L
Sbjct: 356 QES-YKQIQNEFATRLSKIEAERQNLAEAVILAEKKHMEEKRKS-DDLQQQLKTSKVGLD 413
Query: 368 SLQMNMESIMRNRELTETRMIQALREELASV-ERRAEEERAAHNATKMAAMEREVELEHR 426
SL+ M + TR++Q+ + + S+ E E +H+A+ M ELE
Sbjct: 414 SLKQEMADYKQK----ATRILQSKEKLINSLKEGSGIEGLDSHSASTM-------ELEEM 462
Query: 427 AAEASMALARIQRIADERTAKAGELEQKVAMLEV-ECATLQQELQDMEARLKRGQKKSPE 485
E M IQ++ + EL Q V +V E + +++LQD+ + Q+ E
Sbjct: 463 RHERDMQREEIQKLMGQIQQLKAEL-QDVETQQVSEAESAREQLQDVHEQFATQQRAKQE 521
Query: 486 -EANQAIQMQAWQDEVERARQGQRDAENKLSSLEAEVQKMRVEMAAMKRDAEHYSREEHM 544
EA Q Q +Q E + + + ++ E E+QK+R ++ + S
Sbjct: 522 LEAELERQKQEFQYIQEDLYKTKNTLQGRIRDREDEIQKLRNQLTN-----KALSSSSQT 576
Query: 545 ELEKRYRELTDLLYYKQTQLETMASEKAAAEFQLEKEMNRLQEVQVCQRVLHSTPIEVVI 604
ELE R +LT+ L KQT LE +++EK + +QLE+ ++L+ VQ L+ T I + +
Sbjct: 577 ELENRLHQLTETLIQKQTMLENLSTEKNSLVYQLERLEHQLKNVQGSS--LNGTSINMSV 634
>sp|B0F9L7|GOGC2_ARATH Golgin candidate 2 OS=Arabidopsis thaliana GN=GC2 PE=1 SV=1
Length = 668
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 25/186 (13%)
Query: 402 AEEERAAHNATKMAAMEREVELEHRAAEASMALARIQRIADERTAKAGELEQKVAMLEVE 461
A+ E+ HN T+M + R LE AE + +LA Q+ + + + L+Q+V + E
Sbjct: 379 ADLEKQKHNNTRMEVLTRLAGLEAENAELTRSLAAGQKKLETQIDQVAVLKQQVELKEST 438
Query: 462 CATLQQELQDMEAR---LK-----RGQKKSPEEANQAIQMQAWQDEVERARQGQRDAENK 513
L++ ++ R LK RG K + I + D++ R ++K
Sbjct: 439 LEELKRNTFNIGGRGTTLKQLDTSRGDKFEHQMLEAEISLLT--DKIGRL-------QDK 489
Query: 514 LSSLEAEVQKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEKAA 573
+ LEA+++ MR E+ E +EL++R +LTD L KQ+Q+E ++SEKA
Sbjct: 490 ATKLEADIEMMRKEL--------EEPTEVEIELKRRLNQLTDHLIQKQSQVEALSSEKAT 541
Query: 574 AEFQLE 579
F++E
Sbjct: 542 ILFRIE 547
>sp|Q8TBA6|GOGA5_HUMAN Golgin subfamily A member 5 OS=Homo sapiens GN=GOLGA5 PE=1 SV=3
Length = 731
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 138/287 (48%), Gaps = 19/287 (6%)
Query: 296 EELLVAERELSRSYEARIKQLEQELSVYKSEVTKVESNLAEALAAKNSEIETLVSSIDAL 355
E L A+ L R E+ KQ++ E + ++V NLAEA+ + +D L
Sbjct: 352 ERLHEADATLKREQES-YKQMQSEFAARLNKVEMERQNLAEAITLAERKYSDEKKRVDEL 410
Query: 356 KKQAALSEGNLASLQMNMESIMRNRELTETRMIQALREELASVERRAEEERAAHNATKMA 415
++Q L + NL S + + + TR++Q+ + + S++ + E +++ +
Sbjct: 411 QQQVKLYKLNLESSKQELIDYKQK----ATRILQSKEKLINSLKEGSGFE--GLDSSTAS 464
Query: 416 AMEREVELEHRAAEASMALARIQRIADERTAKAGELEQKVAMLEVECATLQQELQDMEAR 475
+ME E EL H E M IQ++ + EL+ A E + +++LQD+ +
Sbjct: 465 SMELE-ELRH---EKEMQREEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQ 520
Query: 476 LKRGQKKSPEEANQAIQM--QAWQDEVERARQGQRDAENKLSSLEAEVQKMRVEMAAMKR 533
+ GQK S +E ++ Q + E + + ++++ + E+QK+R ++
Sbjct: 521 IA-GQKASKQELETELERLKQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTN--- 576
Query: 534 DAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEKAAAEFQLEK 580
+ S ELE R +LT+ L KQT LE++++EK + FQLE+
Sbjct: 577 --KTLSNSSQSELENRLHQLTETLIQKQTMLESLSTEKNSLVFQLER 621
>sp|Q9QYE6|GOGA5_MOUSE Golgin subfamily A member 5 OS=Mus musculus GN=Golga5 PE=1 SV=2
Length = 729
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 68/143 (47%), Gaps = 40/143 (27%)
Query: 465 LQQELQDMEARLKRGQKKSPEEANQAIQMQAWQDEVERARQGQRDAENKLSSLEAEVQKM 524
L+ ELQDMEA+ Q E A + Q+Q QD++ + R +++ LE E+++M
Sbjct: 490 LRSELQDMEAQ----QVSEAESARE--QLQDLQDQIAKQRTSKQE-------LETELERM 536
Query: 525 RVEMAAMKRDAEHYS---------REEHM------------------ELEKRYRELTDLL 557
+ E M+ D REE + ELE R +LT+ L
Sbjct: 537 KQEFRYMEEDLHRTKNTLQSRIKDREEEIQKLRNQLTNKTLSNSSQSELESRLHQLTETL 596
Query: 558 YYKQTQLETMASEKAAAEFQLEK 580
KQT LE++++EK + FQLE+
Sbjct: 597 IQKQTMLESLSTEKNSLVFQLER 619
>sp|Q3ZU82|GOGA5_RAT Golgin subfamily A member 5 OS=Rattus norvegicus GN=Golga5 PE=1
SV=1
Length = 728
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 36/141 (25%)
Query: 465 LQQELQDMEARLKRGQKKSPEEANQAIQMQAWQDEVERARQGQRDAENKLSSL------- 517
L+ ELQDMEA+ Q E A + Q+Q QD++ + R +++ E +L +
Sbjct: 489 LRSELQDMEAQ----QVSEAESARE--QLQDLQDQIAKQRASKQELETELDRMKQEFHYV 542
Query: 518 ------------------EAEVQKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYY 559
E E+QK+R ++ + S ELE R +LT+ L
Sbjct: 543 EEDLHRTKNTLQSRIKDREEEIQKLRNQLTN-----KTLSNSSQSELESRLHQLTETLIQ 597
Query: 560 KQTQLETMASEKAAAEFQLEK 580
KQT LE++++EK + FQLE+
Sbjct: 598 KQTLLESLSTEKNSLVFQLER 618
>sp|Q7SXE4|GOGA5_DANRE Golgin subfamily A member 5 OS=Danio rerio GN=golga5 PE=2 SV=1
Length = 760
Score = 40.8 bits (94), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 518 EAEVQKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEKAAAEFQ 577
E E+QK+R ++ + S ELE R +LT+ L KQT LE + +EK + FQ
Sbjct: 594 EDEIQKLRNQLTN-----KALSNSSQAELEGRLHQLTETLIQKQTMLEALGTEKNSLVFQ 648
Query: 578 LEKEMNRLQEVQVCQ 592
LE+ +L+ +Q Q
Sbjct: 649 LERLEQQLKSLQGGQ 663
>sp|Q90631|KTN1_CHICK Kinectin OS=Gallus gallus GN=KTN1 PE=1 SV=1
Length = 1364
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 18/141 (12%)
Query: 439 RIADERTAKAGELEQKVAMLEVECATLQQELQDMEARLKRGQKKSPEEANQAIQMQAWQD 498
++ +++ +A EL +L++EC + L + E L+R Q+ EE ++ W+
Sbjct: 1122 KVMEQKLKEAEELH---ILLQLECEKYKSVLAETEGILQRLQRSVEEEESK------WKI 1172
Query: 499 EVERARQGQRDAENKLSSLEAEVQKMRVEMA---AMKRDAEHYSRE-EHMELEK-----R 549
+VE +++ + + ++SLE EV++++ E+ +K++ EH E E E+E+
Sbjct: 1173 KVEESQKELKQMRSSVASLEHEVERLKEEIKEVETLKKEREHLESELEKAEIERSTYVSE 1232
Query: 550 YRELTDLLYYKQTQLETMASE 570
REL DLL Q +L+ SE
Sbjct: 1233 VRELKDLLTELQKKLDDSYSE 1253
>sp|Q9UPN4|AZI1_HUMAN 5-azacytidine-induced protein 1 OS=Homo sapiens GN=AZI1 PE=1 SV=3
Length = 1083
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 89/173 (51%), Gaps = 24/173 (13%)
Query: 418 EREVELEHRAAEASMALA----------RIQRIADERTAKAGELEQKVAMLEVECATLQQ 467
++E+EL EA MALA RI+R+ D+ A+ ELEQ L+ C+ L+
Sbjct: 897 DKEIELVIHRLEADMALAKEESEKAAESRIKRLRDKYEAELSELEQSERKLQERCSELKG 956
Query: 468 ELQDMEAR------LKRGQKKSPEEANQAIQMQAWQDEVERARQGQRDAENKLSSLEAEV 521
+L + E L R ++++ E+A QA+ Q + A+ +++ E++L++ E E
Sbjct: 957 QLGEAEGENLRLQGLVRQKERALEDA-QAVNEQLSSERSNLAQVIRQEFEDRLAASEEET 1015
Query: 522 QKMRVEMAAMKRDAEHYSREEHMELEKRYRELTDLLYYKQTQLETMASEKAAA 574
++ + E+A ++ + +ELE+ +R + L K+ + ++ ++ AA
Sbjct: 1016 RQAKAELATLQ-------ARQQLELEEVHRRVKTALARKEEAVSSLRTQHEAA 1061
>sp|O95613|PCNT_HUMAN Pericentrin OS=Homo sapiens GN=PCNT PE=1 SV=4
Length = 3336
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 390 ALRE-ELASVERRAEEERAAHNATKMAAMEREVEL----EHRAAEAS------MALARIQ 438
ALRE E+ + R +E AA A + ER +E+ + +AA ++ +ALARI+
Sbjct: 1843 ALREAEVEDMASRIQEFEAALKAKEATIAERNLEIDALNQRKAAHSAELEAVLLALARIR 1902
Query: 439 RIADERTAKAGELEQKVAMLEVECATLQQELQDMEARLKRGQ 480
R +++ AG ++ L +CA L ++LQ + R R Q
Sbjct: 1903 RALEQQPLAAGAAPPELQWLRAQCARLSRQLQVLHQRFLRCQ 1944
>sp|O14578|CTRO_HUMAN Citron Rho-interacting kinase OS=Homo sapiens GN=CIT PE=1 SV=2
Length = 2027
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 122/267 (45%), Gaps = 41/267 (15%)
Query: 339 AAKNSEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNRELTETRM--IQALREELA 396
+ N EI L S +D L+++ E L S + ME++ + E ++ ++AL +EL
Sbjct: 978 SGANDEIVQLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELL 1037
Query: 397 SVERRAEEERAAHNATK------------MAAMERE---------------VEL---EHR 426
ER+ E R+ K M E++ VEL EH+
Sbjct: 1038 EKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHK 1097
Query: 427 AAEASM--ALARIQRIADERTAKAGELEQKVAMLEVECATLQQELQDMEARLKRGQKKSP 484
A ++ AL + A+ + K +LE+K AMLE+ +LQQ+L + E LK Q+
Sbjct: 1098 AEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKL-ETERELK--QRLLE 1154
Query: 485 EEANQAIQMQAWQDEVERARQGQRDAENKLSSLEAEVQKMRVEMAAMKRDAEHYSREEHM 544
E+A QM ++ + R QG ++A ++ L+ E + ++ ++ H E +
Sbjct: 1155 EQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLYSH----EKV 1210
Query: 545 ELEKRYRELTDLLYYKQTQLETMASEK 571
++E + T L+ + Q +++ A +K
Sbjct: 1211 KMEGTISQQTKLIDFLQAKMDQPAKKK 1237
>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5
Length = 1037
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 324 KSEVTKVESNLAEALAAKN---SEIETLVSSIDALKKQAALSEGNLASLQMNMESIMRNR 380
K V+++E++LAE + + E L + +D L++Q +E Q ++ I R
Sbjct: 406 KGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQREDTE----KAQRSLSEIERKA 461
Query: 381 ELTETRMIQALREELAS-VERRAEEERAAHNATKMAAMERE--VELEHRAAEASMALARI 437
+ E R + L+E+ + V+ A+ R TK +M R+ V+LE E +L
Sbjct: 462 QANEQRYSK-LKEKYSELVQNHADLLRKNAEVTKQVSMARQAQVDLEREKKELEDSL--- 517
Query: 438 QRIADERTAKAGELEQKVAMLEVECATLQQELQDMEARLKRGQKKSPEEANQAIQMQAWQ 497
+RI+D+ K E + + L+ E AT Q+ELQ ++ L + + EAN A + +
Sbjct: 518 ERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSL---ETSAQSEANWAAEFAELE 574
Query: 498 DEVERARQGQRDAENKLSSLEAEVQKMRVEMAA 530
E + G E +LS+L E+Q ++++A+
Sbjct: 575 KERDSLVSGAAHREEELSALRKELQDTQLKLAS 607
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.121 0.313
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,410,197
Number of Sequences: 539616
Number of extensions: 7858702
Number of successful extensions: 53037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 3570
Number of HSP's that attempted gapping in prelim test: 38662
Number of HSP's gapped (non-prelim): 10702
length of query: 608
length of database: 191,569,459
effective HSP length: 123
effective length of query: 485
effective length of database: 125,196,691
effective search space: 60720395135
effective search space used: 60720395135
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)