BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007327
(608 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VT8|ACLB1_ORYSJ ATP-citrate synthase beta chain protein 1 OS=Oryza sativa subsp.
japonica GN=ACLB-1 PE=2 SV=1
Length = 608
Score = 1163 bits (3008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/608 (93%), Positives = 592/608 (97%)
Query: 1 MATGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE 60
MATGQ+FSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPG++GFQKLFFGQEE
Sbjct: 1 MATGQIFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSDGFQKLFFGQEE 60
Query: 61 IAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTK 120
IAIPVH T+EAAC AHP ADVFINF+SFRSAAASSM+ALKQPTIRVVAIIAEGVPE+DTK
Sbjct: 61 IAIPVHPTIEAACNAHPTADVFINFASFRSAAASSMSALKQPTIRVVAIIAEGVPESDTK 120
Query: 121 QLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS 180
QLI+YAR+NNKV+IGPATVGGIQAGAFKIGDTAGTIDNII CKLYRPGSVGFVSKSGGMS
Sbjct: 121 QLISYARANNKVIIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMS 180
Query: 181 NELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 240
NE+YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG+DEYSL
Sbjct: 181 NEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGKDEYSL 240
Query: 241 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 300
VEALKQGKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGE+ESAQAKNQAL+DAGAVVP
Sbjct: 241 VEALKQGKVQKPVVAWVSGTCARLFKSEVQFGHAGAKSGGELESAQAKNQALKDAGAVVP 300
Query: 301 TSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 360
TSYEA E+AIKETFEKLVE+GKI PV E+TPP IPEDL TAIKSGKVRAPTHIISTISDD
Sbjct: 301 TSYEALETAIKETFEKLVEDGKISPVTEITPPPIPEDLKTAIKSGKVRAPTHIISTISDD 360
Query: 361 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGA 420
RGEEPCYAGVPMS+I+EQGYGVGDVISLLWFKRSLPRYCTQFIE+CIMLCADHGPCVSGA
Sbjct: 361 RGEEPCYAGVPMSTIIEQGYGVGDVISLLWFKRSLPRYCTQFIEMCIMLCADHGPCVSGA 420
Query: 421 HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG 480
HN+IVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDR L+ YEFVE MKKKG
Sbjct: 421 HNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRNLTPYEFVEGMKKKG 480
Query: 481 IRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDG 540
IRVPGIGHRIK DNRDKRV+LLQK+A THFPSVKYMEYAVQVETYTLSKANNLVLNVDG
Sbjct: 481 IRVPGIGHRIKSRDNRDKRVQLLQKYAHTHFPSVKYMEYAVQVETYTLSKANNLVLNVDG 540
Query: 541 AIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
AIGSLFLDLL+GSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP
Sbjct: 541 AIGSLFLDLLSGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
Query: 601 WEDVLYTK 608
WEDVLYTK
Sbjct: 601 WEDVLYTK 608
>sp|Q9FGX1|ACLB2_ARATH ATP-citrate synthase beta chain protein 2 OS=Arabidopsis thaliana
GN=ACLB-2 PE=1 SV=1
Length = 608
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/608 (93%), Positives = 594/608 (97%)
Query: 1 MATGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE 60
MATGQLFS+TTQALFYNYKQLP+QRMLDFDFLCGRETPSVAGIINPG+EGFQKLFFGQEE
Sbjct: 1 MATGQLFSRTTQALFYNYKQLPVQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEE 60
Query: 61 IAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTK 120
IAIPVH+ +EAACAAHP ADVFINF+SFRSAAASSMAALKQPTI+VVAIIAEGVPE+DTK
Sbjct: 61 IAIPVHAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTK 120
Query: 121 QLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS 180
QLIAYAR+NNKVVIGPATVGGIQAGAFKIGDTAGTIDNII CKLYRPGSVGFVSKSGGMS
Sbjct: 121 QLIAYARANNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMS 180
Query: 181 NELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 240
NE+YNT+ARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ+KMMVVLGELGGRDEYSL
Sbjct: 181 NEMYNTVARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMMVVLGELGGRDEYSL 240
Query: 241 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 300
VEALK+GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL DAGA+VP
Sbjct: 241 VEALKEGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALIDAGAIVP 300
Query: 301 TSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 360
TS+EA ESAIKETFEKLVEEGK+ P+KEV PPQIPEDLN+AIKSGKVRAPTHIISTISDD
Sbjct: 301 TSFEALESAIKETFEKLVEEGKVSPIKEVIPPQIPEDLNSAIKSGKVRAPTHIISTISDD 360
Query: 361 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGA 420
RGEEPCYAGVPMSSI+EQGYGVGDVISLLWFKRSLPRYCT+FIEICIMLCADHGPCVSGA
Sbjct: 361 RGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVSGA 420
Query: 421 HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG 480
HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDA DR L+ YEFVE MKKKG
Sbjct: 421 HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDACDRNLTPYEFVEGMKKKG 480
Query: 481 IRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDG 540
IRVPGIGHRIK DNRDKRVELLQKFAR++FPSVKYMEYAV VETYTLSKANNLVLNVDG
Sbjct: 481 IRVPGIGHRIKSRDNRDKRVELLQKFARSNFPSVKYMEYAVTVETYTLSKANNLVLNVDG 540
Query: 541 AIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
AIGSLFLDLLAGSGMF+KQEIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP
Sbjct: 541 AIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
Query: 601 WEDVLYTK 608
WEDVLYTK
Sbjct: 601 WEDVLYTK 608
>sp|Q9C522|ACLB1_ARATH ATP-citrate synthase beta chain protein 1 OS=Arabidopsis thaliana
GN=ACLB-1 PE=2 SV=1
Length = 608
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/608 (92%), Positives = 593/608 (97%)
Query: 1 MATGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE 60
MATGQLFS+ TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPG+EGFQKLFFGQEE
Sbjct: 1 MATGQLFSRNTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQEE 60
Query: 61 IAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTK 120
IAIPVH+ +EAACAAHP ADVFINF+SFRSAAASSMAALKQPTI+VVAIIAEGVPE+DTK
Sbjct: 61 IAIPVHAAIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIKVVAIIAEGVPESDTK 120
Query: 121 QLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS 180
QLIAYAR+NNKV+IGPATVGG+QAGAFKIGDTAGTIDNII CKLYRPGSVGFVSKSGGMS
Sbjct: 121 QLIAYARANNKVIIGPATVGGVQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMS 180
Query: 181 NELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 240
NE+YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ+KM+VVLGELGGRDEYSL
Sbjct: 181 NEMYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQIKMVVVLGELGGRDEYSL 240
Query: 241 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP 300
VEA+KQGKV KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL+DAGA VP
Sbjct: 241 VEAMKQGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALQDAGATVP 300
Query: 301 TSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDD 360
TS+EA E AIKETF+KLVEEGK+ P+KEVTPPQIPEDL++AIKSGKVRAPTHIISTISDD
Sbjct: 301 TSFEALEVAIKETFDKLVEEGKVSPIKEVTPPQIPEDLSSAIKSGKVRAPTHIISTISDD 360
Query: 361 RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGA 420
RGEEPCYAGVPMSSI+EQGYGVGDVISLLWFKRSLPRYCT+FIEICIMLCADHGPCVSGA
Sbjct: 361 RGEEPCYAGVPMSSIIEQGYGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVSGA 420
Query: 421 HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG 480
HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDA DR L+ YEFVE MKKKG
Sbjct: 421 HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDACDRNLTPYEFVEGMKKKG 480
Query: 481 IRVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDG 540
IRVPGIGHRIK DNRDKRVELLQKFAR++FP+VKYMEYAVQVETYTLSKANNLVLNVDG
Sbjct: 481 IRVPGIGHRIKSRDNRDKRVELLQKFARSNFPAVKYMEYAVQVETYTLSKANNLVLNVDG 540
Query: 541 AIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
AIGSLFLDLLAGSGMF+KQEIDEIV+IGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP
Sbjct: 541 AIGSLFLDLLAGSGMFTKQEIDEIVQIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600
Query: 601 WEDVLYTK 608
WEDVLYTK
Sbjct: 601 WEDVLYTK 608
>sp|Q54YA0|ACLY_DICDI Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly
PE=1 SV=1
Length = 622
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/603 (64%), Positives = 483/603 (80%), Gaps = 1/603 (0%)
Query: 5 QLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEG-FQKLFFGQEEIAI 63
+LF+K +QAL YNYK+ +QRMLDFD + R+TPSV G+I+PG++G K FFG +E+ I
Sbjct: 18 RLFTKQSQALIYNYKEAAVQRMLDFDNVSQRDTPSVGGLIHPGSDGGMYKAFFGFKELVI 77
Query: 64 PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLI 123
PV+++V AC P ADVF+NF+S RSA SS+ AL++P+I+ V IIAEGVPE + + LI
Sbjct: 78 PVYNSVSEACQQCPNADVFLNFASHRSAYQSSLLALREPSIQTVVIIAEGVPENEARSLI 137
Query: 124 AYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNEL 183
+ A+ KV+IGPATVGGIQAG FKIG+TAGTI I+ CKLYR GSVGFVSKSGG+SNE+
Sbjct: 138 SIAKKLGKVIIGPATVGGIQAGCFKIGNTAGTIVYIMACKLYRSGSVGFVSKSGGLSNEM 197
Query: 184 YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEA 243
YN ++R TDGIYEGIAIGGD FPGSTL+DH LR+ +P+V+M+V+LGELGG DEY +VEA
Sbjct: 198 YNVLSRCTDGIYEGIAIGGDAFPGSTLTDHALRYEKLPEVQMIVILGELGGWDEYGIVEA 257
Query: 244 LKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSY 303
LK+G++ KP+ AWVSGT A++F +EVQFGHAGAKSGGE ESA AKN+ALR+AGAVVPTS+
Sbjct: 258 LKKGEITKPICAWVSGTVAKIFPTEVQFGHAGAKSGGETESADAKNKALREAGAVVPTSF 317
Query: 304 EAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGE 363
E F + I T+ KL +G + PV+E TPP++P D TA+K+GKVR PT IISTI DDRG+
Sbjct: 318 EDFSNVIAATYAKLQSKGLVKPVEEPTPPELPLDFKTAVKAGKVRKPTSIISTICDDRGD 377
Query: 364 EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNT 423
E YAGVP+S + ++ Y +GDVI LLWFKR LP Y ++F E+C+ L ADHGPCVSGAHNT
Sbjct: 378 ELSYAGVPISEVCKEQYNMGDVIGLLWFKRKLPPYASKFFEMCLKLVADHGPCVSGAHNT 437
Query: 424 IVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRV 483
IV ARAGKDLVSSLVSGLLTIGPRFGGAIDD+AR F+DA D L +FVE MK KG R+
Sbjct: 438 IVAARAGKDLVSSLVSGLLTIGPRFGGAIDDSARVFQDAVDNNLQPSQFVEGMKSKGKRI 497
Query: 484 PGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIG 543
PGIGH IK D DKRV LL+ +A THF S KY+EYA++VE YTL KANNL+LNVDG IG
Sbjct: 498 PGIGHLIKSADEIDKRVVLLKDYAFTHFSSTKYLEYALEVEKYTLQKANNLILNVDGCIG 557
Query: 544 SLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWED 603
LFLDLL SG+F++ EI EI+++GYLNG F++ RS+GLIGH DQ+R KQ LYRH +D
Sbjct: 558 VLFLDLLHSSGLFTQHEIKEIIDVGYLNGFFIVGRSVGLIGHALDQRRNKQGLYRHQADD 617
Query: 604 VLY 606
V Y
Sbjct: 618 VHY 620
>sp|Q9P7W3|ACL1_SCHPO Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC1703.07 PE=1 SV=1
Length = 615
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/603 (55%), Positives = 439/603 (72%), Gaps = 1/603 (0%)
Query: 5 QLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAI 63
+LFSK T+A Y + +Q MLDFD++CGR PSVA II G++ KL++G +EI +
Sbjct: 11 ELFSKDTRAFVYGMQTKAVQGMLDFDYMCGRTVPSVAAIIYTFGSQSISKLYWGTKEILL 70
Query: 64 PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLI 123
PV+ T+E AC HP DV +NF+S RSA AS+M ++ P IR +AIIAEGVPE ++++
Sbjct: 71 PVYRTIEEACTKHPEVDVVVNFASSRSAYASTMELMEFPQIRCIAIIAEGVPERRAREIL 130
Query: 124 AYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNEL 183
++ N V+IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VSKSGGMSNEL
Sbjct: 131 VTSKEKNVVIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRPGSVAYVSKSGGMSNEL 190
Query: 184 YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEA 243
N I+ TDG+YEGIAIGGD +PG+T DH++RF P K+MV+LGE+GG +EY ++EA
Sbjct: 191 NNIISHTTDGVYEGIAIGGDRYPGTTFIDHLIRFEADPACKLMVLLGEVGGVEEYRVIEA 250
Query: 244 LKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSY 303
+K G + KP+VAW GTC+ +FK+EVQFGHAG+ + E+E+A AKNQA+R+AG VP ++
Sbjct: 251 VKNGTIKKPIVAWAIGTCSSMFKTEVQFGHAGSFANSELETAVAKNQAMREAGIYVPETF 310
Query: 304 EAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGE 363
E + ++E +E LV++G I P EV PP IP D A + G VR P+ I TIS+DRG
Sbjct: 311 EKLPALLQEVYEGLVKKGVIVPQPEVAPPNIPLDYAWAKELGLVRKPSSFICTISNDRGS 370
Query: 364 EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNT 423
E Y VP+S + E+ G+G VISLLW +R LP Y T+F+E+ + L ADHGPCVSGA NT
Sbjct: 371 ELTYNNVPISKVFEEELGIGGVISLLWLRRRLPSYATKFLEMVLQLTADHGPCVSGAMNT 430
Query: 424 IVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRV 483
I+T RAGKDL+SSLV+GLLTIG RFGGA+D AA+ F AYD GLS FV+S +K +
Sbjct: 431 IITTRAGKDLISSLVAGLLTIGTRFGGALDGAAQEFSKAYDAGLSPRAFVDSCRKANKLI 490
Query: 484 PGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIG 543
PGIGHRIK +N D RVEL++ + + +FPS K ++YA+ VE T SK +NL+LNVDG I
Sbjct: 491 PGIGHRIKSRNNPDLRVELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIA 550
Query: 544 SLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWED 603
F+DLL G F+ +E +E + +G LNG+FVL RSIGLIGH DQKRL+ PLYRHPW+D
Sbjct: 551 VCFVDLLRNCGAFTLEEANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDD 610
Query: 604 VLY 606
LY
Sbjct: 611 FLY 613
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/605 (53%), Positives = 432/605 (71%), Gaps = 1/605 (0%)
Query: 3 TGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEI 61
+ LFS+ T+A+ + + +Q MLDFD++C R+ PSVA ++ P + QK ++G +EI
Sbjct: 479 SATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEI 538
Query: 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQ 121
IPV + A HP DV INF+S RSA S+M + IR +AIIAEG+PEA T++
Sbjct: 539 LIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRK 598
Query: 122 LIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSN 181
LI A +IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSN
Sbjct: 599 LIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSN 658
Query: 182 ELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241
EL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY +
Sbjct: 659 ELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKIC 718
Query: 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPT 301
+K+G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG VP
Sbjct: 719 RGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR 778
Query: 302 SYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 361
S++ I+ +E LV +G I P +EV PP +P D + A + G +R P +++I D+R
Sbjct: 779 SFDELGEIIQSVYEDLVAKGAIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDER 838
Query: 362 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAH 421
G+E YAG+P++ + ++ G+G V+ LLWF+R LP+Y QFIE+C+M+ ADHGP VSGAH
Sbjct: 839 GQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYSCQFIEMCLMVTADHGPAVSGAH 898
Query: 422 NTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481
NTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK+G
Sbjct: 899 NTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGK 958
Query: 482 RVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGA 541
+ GIGHR+K +N D RV++L+ F + HFP+ ++YA++VE T SK NL+LNVDG
Sbjct: 959 LIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGF 1018
Query: 542 IGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601
IG F+D+L G F+++E DE V+IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW
Sbjct: 1019 IGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPW 1078
Query: 602 EDVLY 606
+D+ Y
Sbjct: 1079 DDISY 1083
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/605 (53%), Positives = 432/605 (71%), Gaps = 1/605 (0%)
Query: 3 TGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEI 61
+ LFS+ T+A+ + + +Q MLDFD++C R+ PSVA ++ P + QK ++G +EI
Sbjct: 488 SATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEI 547
Query: 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQ 121
IPV + A HP DV INF+S RSA S+M + IR +AIIAEG+PEA T++
Sbjct: 548 LIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRK 607
Query: 122 LIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSN 181
LI A +IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSN
Sbjct: 608 LIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSN 667
Query: 182 ELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241
EL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY +
Sbjct: 668 ELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKIC 727
Query: 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPT 301
+K+G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG VP
Sbjct: 728 RGIKEGRLTKPVVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR 787
Query: 302 SYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 361
S++ I+ +E LV +G I P +EV PP +P D + A + G +R P +++I D+R
Sbjct: 788 SFDELGEIIQSVYEDLVAKGAIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDER 847
Query: 362 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAH 421
G+E YAG+P++ + ++ G+G V+ LLWF+R LP+Y QFIE+C+M+ ADHGP VSGAH
Sbjct: 848 GQELIYAGMPITEVFKEEMGIGGVLGLLWFQRRLPKYSCQFIEMCLMVTADHGPAVSGAH 907
Query: 422 NTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481
NTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK+G
Sbjct: 908 NTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGK 967
Query: 482 RVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGA 541
+ GIGHR+K +N D RV++L+ F + HFP+ ++YA++VE T SK NL+LNVDG
Sbjct: 968 LIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGF 1027
Query: 542 IGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601
IG F+D+L G F+++E DE V+IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW
Sbjct: 1028 IGVAFVDMLRNCGSFTREEADEYVDIGALNGVFVLGRSMGFIGHYLDQKRLKQGLYRHPW 1087
Query: 602 EDVLY 606
+D+ Y
Sbjct: 1088 DDISY 1092
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/602 (53%), Positives = 430/602 (71%), Gaps = 1/602 (0%)
Query: 6 LFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAIP 64
LFS+ T+A+ + + +Q MLDFD++C R+ PSVA ++ P + QK ++G +EI IP
Sbjct: 492 LFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIP 551
Query: 65 VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIA 124
V + A HP DV INF+S RSA S+M + IR +AIIAEG+PEA T++LI
Sbjct: 552 VFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIK 611
Query: 125 YARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELY 184
A +IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSNEL
Sbjct: 612 KADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELN 671
Query: 185 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244
N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY + +
Sbjct: 672 NIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKICRGI 731
Query: 245 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYE 304
K+G++ KP+V W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG VP S++
Sbjct: 732 KEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFD 791
Query: 305 AFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEE 364
I+ +E LV G I P +EV PP +P D + A + G +R P +++I D+RG+E
Sbjct: 792 ELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDERGQE 851
Query: 365 PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTI 424
YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VSGAHNTI
Sbjct: 852 LIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAHNTI 911
Query: 425 VTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVP 484
+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK+G +
Sbjct: 912 ICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIM 971
Query: 485 GIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGS 544
GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNVDG IG
Sbjct: 972 GIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGV 1031
Query: 545 LFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDV 604
F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW+D+
Sbjct: 1032 AFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDI 1091
Query: 605 LY 606
Y
Sbjct: 1092 SY 1093
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/605 (53%), Positives = 430/605 (71%), Gaps = 1/605 (0%)
Query: 3 TGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEI 61
+ LFS+ T+A+ + + +Q MLDFD++C R+ PSVA ++ P + QK ++G +EI
Sbjct: 489 SATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEI 548
Query: 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQ 121
IPV + A HP DV INF+S RSA S+M + IR +AIIAEG+PEA T++
Sbjct: 549 LIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYTQIRTIAIIAEGIPEALTRK 608
Query: 122 LIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSN 181
LI A +IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSN
Sbjct: 609 LIKKAEQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSN 668
Query: 182 ELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241
EL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + P VKM+VVLGE+GG +EY +
Sbjct: 669 ELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKIC 728
Query: 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPT 301
+ +G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG VP
Sbjct: 729 RGVTEGRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR 788
Query: 302 SYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 361
S++ I+ +E LV G I P +EV PP +P D + A + G +R P +++I D+R
Sbjct: 789 SFDELGEIIQSVYEDLVARGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDER 848
Query: 362 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAH 421
G+E YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VSGAH
Sbjct: 849 GQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAH 908
Query: 422 NTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481
NTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK+G
Sbjct: 909 NTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGK 968
Query: 482 RVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGA 541
+ GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNVDG
Sbjct: 969 LIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGL 1028
Query: 542 IGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601
IG F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW
Sbjct: 1029 IGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPW 1088
Query: 602 EDVLY 606
+D+ Y
Sbjct: 1089 DDISY 1093
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/605 (52%), Positives = 429/605 (70%), Gaps = 1/605 (0%)
Query: 3 TGQLFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEI 61
+ LFS+ T+A+ + + +Q MLDFD++C R+ PSVA ++ P + QK ++G +EI
Sbjct: 479 SATLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEI 538
Query: 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQ 121
IPV + A HP DV INF+S RSA S+M + IR +AIIAEG+PEA T++
Sbjct: 539 LIPVFKNMADAMKKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRK 598
Query: 122 LIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSN 181
LI A +IGPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSN
Sbjct: 599 LIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSN 658
Query: 182 ELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241
EL N I+R TDG+YEG+AIGGD +PGST DH+LR+ + VKM+VVLGE+GG +EY +
Sbjct: 659 ELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTAGVKMIVVLGEIGGTEEYKIC 718
Query: 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPT 301
+ +G++ KPVV W GTCA +F SEVQFGHAGA + E+A AKNQAL++AG VP
Sbjct: 719 RGVTEGRITKPVVCWCIGTCAAMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPR 778
Query: 302 SYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDR 361
S++ I+ +E LV G I P +EV PP +P D + A + G +R P +++I D+R
Sbjct: 779 SFDELGEIIQSVYEDLVARGVIVPAQEVPPPTVPMDYSWARELGLIRKPASFMTSICDER 838
Query: 362 GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAH 421
G+E YAG+P++ + ++ G+G V+ LLWF++ LP+Y QFIE+C+M+ ADHGP VSGAH
Sbjct: 839 GQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADHGPAVSGAH 898
Query: 422 NTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481
NTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F A+D G+ EFV MKK+G
Sbjct: 899 NTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGK 958
Query: 482 RVPGIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGA 541
+ GIGHR+K +N D RV++L+ + R HFP+ ++YA++VE T SK NL+LNVDG
Sbjct: 959 LIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGL 1018
Query: 542 IGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601
IG F+D+L G F+++E DE ++IG LNG+FVL RS+G IGH DQKRLKQ LYRHPW
Sbjct: 1019 IGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPW 1078
Query: 602 EDVLY 606
+D+ Y
Sbjct: 1079 DDISY 1083
>sp|O93988|ACL1_SORMK ATP-citrate synthase subunit 1 OS=Sordaria macrospora (strain ATCC
MYA-333 / DSM 997 / K(L3346) / K-hell) GN=ACL1 PE=3 SV=1
Length = 674
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/602 (53%), Positives = 435/602 (72%), Gaps = 1/602 (0%)
Query: 6 LFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAIP 64
LF++ T+ Y + +Q MLDFDF+C R TPSVAGII G + K+++G E +P
Sbjct: 52 LFNEKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 111
Query: 65 VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIA 124
V+ V+ A A HP DV +NF+S RS +S+M ++ P I+ +AIIAEGVPE +++
Sbjct: 112 VYQEVQKAIAKHPDVDVVVNFASSRSVYSSTMELMEHPQIKTIAIIAEGVPERRAREIAY 171
Query: 125 YARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELY 184
A+ +IGPATVGGI+ G FKIG+T G +DNI+ KLYR GSVG+VSKSGGMSNEL
Sbjct: 172 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 231
Query: 185 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244
N I++ TDG+YEG+AIGGD +PG+T DH+LR+ P K++V+LGE+GG +EY ++EA+
Sbjct: 232 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPACKILVLLGEVGGVEEYKVIEAV 291
Query: 245 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYE 304
KQG + KP+VAW GTCA +FK+EVQFGHAGA + ++E+A KN+++R+AG VP ++E
Sbjct: 292 KQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDTFE 351
Query: 305 AFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEE 364
+ +K+ ++KLV +G I P E P+IP D + A + G +R P ISTISDDRG+E
Sbjct: 352 DMPALLKQVYDKLVADGTIVPAPEPVVPKIPIDYSWAQELGLIRKPAAFISTISDDRGQE 411
Query: 365 PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTI 424
YAG+P+S + + G+G V+SLLWF+R LP Y +F+E+ +ML ADHGP VSGA NTI
Sbjct: 412 LLYAGMPISDVFREEIGIGGVMSLLWFRRRLPDYAAKFLEMVLMLTADHGPAVSGAMNTI 471
Query: 425 VTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVP 484
+T RAGKDL+SSLV+GLLTIG RFGGA+D AA F A+D+GLS EFV++M+K+ +P
Sbjct: 472 ITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIP 531
Query: 485 GIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGS 544
GIGHR+K +N D RVEL++++ + FPS K ++YA+ VET T SK +NL+LNVDG I
Sbjct: 532 GIGHRVKSRNNPDLRVELVKEYVKAKFPSSKLLDYALAVETVTTSKKDNLILNVDGCIAV 591
Query: 545 LFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDV 604
F+DLL G FS +E ++ + +G LNGLFVL RSIGLI H DQKRL+ LYRHPW+D+
Sbjct: 592 CFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDI 651
Query: 605 LY 606
Y
Sbjct: 652 TY 653
>sp|Q8X097|ACL1_NEUCR Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=B14D6.310 PE=3 SV=1
Length = 670
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/602 (52%), Positives = 434/602 (72%), Gaps = 1/602 (0%)
Query: 6 LFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAIP 64
LF+ T+ Y + +Q MLDFDF+C R TPSVAGII G + K+++G E +P
Sbjct: 48 LFNDKTRCFVYGLQPRAVQGMLDFDFICKRSTPSVAGIIYTFGGQFVSKMYWGTSETLLP 107
Query: 65 VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIA 124
V+ V A A HP DV +NF+S RS +S+M ++ P I+ +AIIAEGVPE +++
Sbjct: 108 VYQEVPKAIAKHPDVDVVVNFASSRSVYSSTMELMEYPQIKTIAIIAEGVPERRAREIAY 167
Query: 125 YARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELY 184
A+ +IGPATVGGI+ G FKIG+T G +DNI+ KLYR GSVG+VSKSGGMSNEL
Sbjct: 168 VAKKKGITIIGPATVGGIKPGCFKIGNTGGMMDNIVASKLYRKGSVGYVSKSGGMSNELN 227
Query: 185 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244
N I++ TDG+YEG+AIGGD +PG+T DH+LR+ P K++V+LGE+GG +EY +++A+
Sbjct: 228 NIISQTTDGVYEGVAIGGDRYPGTTFIDHLLRYQADPDCKILVLLGEVGGVEEYKVIDAV 287
Query: 245 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYE 304
KQG + KP+VAW GTCA +FK+EVQFGHAGA + ++E+A KN+++R+AG VP ++E
Sbjct: 288 KQGIITKPIVAWAIGTCASMFKTEVQFGHAGAFANSQLETAATKNKSMREAGFYVPDTFE 347
Query: 305 AFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEE 364
+ +K+ ++KLV +G I P E P+IP D + A + G +R P ISTISDDRG+E
Sbjct: 348 DMPALLKQVYDKLVADGTIVPAPEPVVPKIPIDYSWAQELGLIRKPAAFISTISDDRGQE 407
Query: 365 PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTI 424
YAG+P+S + ++ G+G V+SLLWF+R LP Y +F+E+ +ML ADHGP VSGA NTI
Sbjct: 408 LLYAGMPISDVFKEEIGIGGVMSLLWFRRRLPDYAAKFLEMVLMLTADHGPAVSGAMNTI 467
Query: 425 VTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVP 484
+T RAGKDL+SSLV+GLLTIG RFGGA+D AA F A+D+GLS EFV++M+K+ +P
Sbjct: 468 ITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIP 527
Query: 485 GIGHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGS 544
GIGHR+K +N D RVEL++++ + FPS K ++YA+ VE+ T SK +NL+LNVDG I
Sbjct: 528 GIGHRVKSRNNPDLRVELVKEYVKAKFPSTKLLDYALAVESVTTSKKDNLILNVDGCIAV 587
Query: 545 LFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDV 604
F+DLL G FS +E ++ + +G LNGLFVL RSIGLI H DQKRL+ LYRHPW+D+
Sbjct: 588 CFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDI 647
Query: 605 LY 606
Y
Sbjct: 648 TY 649
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/605 (54%), Positives = 432/605 (71%), Gaps = 4/605 (0%)
Query: 6 LFSKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAIP 64
LF T+A+ + + IQ MLDFD++C R +PSV P + QK +FGQ+EI IP
Sbjct: 492 LFEDDTKAIIWGQQAKAIQGMLDFDYVCRRSSPSVVASTYPFTGDNKQKYYFGQKEILIP 551
Query: 65 VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIA 124
+ ++ A A HP A + + F+S RS + + AL+ P I+V+AIIAEGVPE T++L+
Sbjct: 552 AYKSMAKAFATHPDASIMVTFASMRSVFETVLEALEFPQIKVIAIIAEGVPENQTRKLLK 611
Query: 125 YARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELY 184
A ++GPATVGGI+ G FKIG+T G +DNI+ KLYRPGSV +VS+SGGMSNEL
Sbjct: 612 IAHDRGVTLVGPATVGGIKPGCFKIGNTGGMMDNILASKLYRPGSVAYVSRSGGMSNELN 671
Query: 185 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244
N I++ T+G+YEGIAIGGD +PGST +DH++R+ N +VKM+V+LGE+GG +EY +V+ L
Sbjct: 672 NIISQNTNGVYEGIAIGGDRYPGSTYTDHVIRYQNDDRVKMIVLLGEVGGVEEYKIVDLL 731
Query: 245 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYE 304
KQ KV KP+VAW GTCA SEVQFGHAGA + E+A KN ALR +GA+VP S++
Sbjct: 732 KQKKVTKPLVAWCIGTCADHITSEVQFGHAGASANALGETAACKNAALRASGALVPESFD 791
Query: 305 AFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEE 364
+ I++T+++LV + I P EV PP +P D A + G +R P +++I D+RGEE
Sbjct: 792 DLGNKIRQTYDELVSQQIIVPQPEVPPPAVPMDYAWARELGLIRKPASFMTSICDERGEE 851
Query: 365 PCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTI 424
YAGVP++ ++E G+G V+ LLWF++ LP + +FIEIC+ML ADHGP VSGAHNTI
Sbjct: 852 LNYAGVPITKVLESDMGIGGVLGLLWFQKRLPPHANKFIEICLMLTADHGPAVSGAHNTI 911
Query: 425 VTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVP 484
V ARAGKDL+SSL SGLLTIG RFGGA+D AAR F +A+D+G SA +FV M+KKG +
Sbjct: 912 VCARAGKDLISSLTSGLLTIGDRFGGALDGAARQFSEAFDQGWSANQFVSEMRKKGKHIM 971
Query: 485 GIGHRIKRGDNRDKRVELLQKFA---RTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGA 541
GIGHR+K +N DKRVE+L++FA + EYA++VE T +K NL+LNVDGA
Sbjct: 972 GIGHRVKSINNPDKRVEILKRFAMDKKEFAQETPLFEYALEVEKITTAKKPNLILNVDGA 1031
Query: 542 IGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601
I LF+D+L SGMF+KQE +E +EIG LNGLFVL RSIG IGH DQ RLKQ LYRHPW
Sbjct: 1032 IAILFVDILRHSGMFTKQEAEETIEIGSLNGLFVLGRSIGFIGHYLDQSRLKQGLYRHPW 1091
Query: 602 EDVLY 606
+D+ Y
Sbjct: 1092 DDISY 1096
>sp|Q8LAD2|SUCA2_ARATH Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2
Length = 341
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 133/261 (50%), Gaps = 14/261 (5%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G E + +PV +TV A A A+ + + AAA+ M L + ++ I EG+P+
Sbjct: 89 GTEHLGLPVFNTV-AEAKAETKANASVIYVPAPFAAAAIMEGLAA-ELDLIVCITEGIPQ 146
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ A S +K +IGP G I+ G KIG G I ++PG +G VS+
Sbjct: 147 HDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYI--------HKPGKIGIVSR 198
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G + IGGD F G+ D + +F PQ + +V++GE+GG
Sbjct: 199 SGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGT 258
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E +K+ +KPVVA+++G A + + GHAGA G +AQ K ++LRDA
Sbjct: 259 AEEDAAALIKENGTDKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLRDA 315
Query: 296 GAVVPTSYEAFESAIKETFEK 316
G V S +A+ E F++
Sbjct: 316 GVKVVESPAKIGAAMFELFQE 336
>sp|Q8GTQ9|SUCA1_SOLLC Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial
OS=Solanum lycopersicum GN=SCOA PE=1 SV=1
Length = 332
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 133/261 (50%), Gaps = 14/261 (5%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G E + +PV +TVE A A A+ + + AAA+ M L + + ++ I EG+P+
Sbjct: 81 GTEHLGLPVFNTVEEA-KAETKANASVIYVPPPFAAAAIMEGL-EAELDLIVCITEGIPQ 138
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ A + ++ +IGP G I+ G KIG G I ++PG +G VS+
Sbjct: 139 HDMVRVKAALKKQSRTRLIGPNCPGIIKPGECKIGIMPGYI--------HKPGRIGIVSR 190
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G + IGGD F G+ D + +F PQ + +V++GE+GG
Sbjct: 191 SGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFIADPQTEGIVLIGEIGGT 250
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E +K+ KPVVA+++G A + + GHAGA G +AQ K +AL++A
Sbjct: 251 AEEDAAALIKESGTQKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALKEA 307
Query: 296 GAVVPTSYEAFESAIKETFEK 316
G V S ++ E F++
Sbjct: 308 GVTVCESPAKIGVSMLEVFKQ 328
>sp|O28733|SUCD1_ARCFU Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=sucD1 PE=3 SV=1
Length = 291
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 138/292 (47%), Gaps = 29/292 (9%)
Query: 24 QRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83
+RMLD+ V G + PG G E IPV++TVE A A AD I
Sbjct: 29 KRMLDYG-------TKVVGGVTPGKGG-------SEVHGIPVYNTVEEAVA-ETNADTSI 73
Query: 84 NFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQ 143
+ R A + A +R+V + EG+P D + R +++GP G I
Sbjct: 74 IYVPARFATDAIFEAF-DAGLRLVVCVTEGIPLYDEMLIHRKLREVKSMLLGPNCPGVIS 132
Query: 144 AGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGD 203
G K+G ++ + + G++G VS+SG ++ ++ + + G + IGGD
Sbjct: 133 PGRSKVG--------LLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTVVGIGGD 184
Query: 204 VFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCAR 263
PG T D + F + K ++++GE+GG E E +KQ ++KPVVA+++G A
Sbjct: 185 PMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ--MSKPVVAFIAGRTAP 242
Query: 264 LFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 315
K + GHAGA G +A+AK ALRDAGA V + ++ E
Sbjct: 243 PGK---RMGHAGAIIEGSTGTAEAKMAALRDAGARVAETLLDVVKEVRRVLE 291
>sp|P68209|SUCA1_ARATH Succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=At5g08300 PE=1 SV=1
Length = 347
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 14/261 (5%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G E + +PV ++V A A A+ + + AAA+ M + + + ++ I EG+P+
Sbjct: 94 GTEHLGLPVFNSV-AEAKADTKANASVIYVPAPFAAAAIMEGI-EAELDLIVCITEGIPQ 151
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ S +K +IGP G I+ G KIG G I ++PG +G VS+
Sbjct: 152 HDMVRVKHALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYI--------HKPGKIGIVSR 203
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G + IGGD F G+ D + +F PQ + +V++GE+GG
Sbjct: 204 SGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFVDPQTEGIVLIGEIGGT 263
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E +K KPVVA+++G A + + GHAGA G +AQ K ++L DA
Sbjct: 264 AEEDAAALIKASGTEKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKSLNDA 320
Query: 296 GAVVPTSYEAFESAIKETFEK 316
G V S SA+ E F++
Sbjct: 321 GVKVVESPAKIGSAMYELFQE 341
>sp|Q6ZL94|SUCA_ORYSJ Probable succinyl-CoA ligase [ADP-forming] subunit alpha,
mitochondrial OS=Oryza sativa subsp. japonica
GN=Os07g0577700 PE=1 SV=1
Length = 331
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 16/262 (6%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G E + +PV ++V EA A V F +AA + +V I EG+P
Sbjct: 79 GTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEA---ELDLVVCITEGIP 135
Query: 116 EADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
+ D ++ A +K +IGP G I+ G KIG G I ++PG VG VS
Sbjct: 136 QHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYI--------HKPGRVGIVS 187
Query: 175 KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG 234
+SG ++ E V G + IGGD F G+ D + +F + PQ + +V++GE+GG
Sbjct: 188 RSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLEKFVDDPQTEGIVLIGEIGG 247
Query: 235 RDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRD 294
E +++ K KPVVA+++G A + + GHAGA G +AQ K +ALR+
Sbjct: 248 TAEEDAAAFIQESKTQKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALRE 304
Query: 295 AGAVVPTSYEAFESAIKETFEK 316
AG V S S + E F++
Sbjct: 305 AGVTVVESPAKIGSTMFEIFKQ 326
>sp|O26663|SUCD_METTH Succinyl-CoA ligase [ADP-forming] subunit alpha
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=sucD PE=3 SV=1
Length = 293
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 122/245 (49%), Gaps = 20/245 (8%)
Query: 57 GQEEIAIPVHSTVEAACAAHPM--ADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114
GQE + + V+++VE + + +F+ + AA S+ L +V II E +
Sbjct: 49 GQEFLGVDVYNSVEEVTEEMDVNASIIFVPAPFAKDAAFESIKHLD-----LVVIITEHI 103
Query: 115 PEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
P D+ Q++ YA K VIGP T G I G K+G I+ ++ G++G VS
Sbjct: 104 PVHDSMQIMEYASRMGKTVIGPNTPGIITPGIGKLG--------IMPTHIFTEGTIGIVS 155
Query: 175 KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG 234
+SG ++ E + G + IGGD G D + RF + P +V++GE+GG
Sbjct: 156 RSGTLTYEFAAQLTEAGFGQSTCVGIGGDPVTGLGFVDVLERFEDDPGTDAVVLIGEIGG 215
Query: 235 RDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRD 294
E ++Q ++KPV A++SG A K + GHAGA G +A +K +AL
Sbjct: 216 DAEERAASYIEQ--MSKPVFAFISGATAPPGK---RMGHAGAIIEGGTGTASSKREALEA 270
Query: 295 AGAVV 299
AGAVV
Sbjct: 271 AGAVV 275
>sp|O28098|SUCD2_ARCFU Succinyl-CoA ligase [ADP-forming] subunit alpha 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=sucD2 PE=3 SV=1
Length = 287
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 140/277 (50%), Gaps = 31/277 (11%)
Query: 24 QRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTV-EAACAAHPMADVF 82
+RML++ T VAG+ PG G E + +PV+ +V EA A A V
Sbjct: 26 ERMLNYG------TKIVAGV-TPGKGG-------TEVLGVPVYDSVKEAVREADANASVI 71
Query: 83 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 142
+ F AA ++ I+V+ I EG+P D ++ + +IGP G I
Sbjct: 72 FVPAPF---AADAVMEAADAGIKVIVCITEGIPVHDELKMYWRVKEAGATLIGPNCPGII 128
Query: 143 QAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGG 202
G +G I+ ++++PG+VG VS+SG ++ ++ + ++ G + IGG
Sbjct: 129 SPGKTHLG--------IMPVQIFKPGNVGIVSRSGTLTYQIAYNLTKLGLGQSTVVGIGG 180
Query: 203 DVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCA 262
D G+ + + F + + K +V++GE+GGRDE E +++ ++KPVV +V+G A
Sbjct: 181 DRIIGTDFVEVLRLFEDDKETKAVVLVGEIGGRDEEVAAEFIRE--MSKPVVGYVAGLTA 238
Query: 263 RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVV 299
K + GHAGA G + +A++K +AL AGA V
Sbjct: 239 PPGK---RMGHAGAIIEGGVGTAESKIKALEAAGARV 272
>sp|Q6DQL1|SUCA2_SOLLC Succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial
OS=Solanum lycopersicum PE=1 SV=1
Length = 337
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G E + +PV +TV EA A V F +AA + +V I EG+P
Sbjct: 86 GTEHLGLPVFNTVAEAKVETKANASVVYVPPPFAAAAIMEAMEA---ELDLVVCITEGIP 142
Query: 116 EADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
+ D ++ A + + +IGP G I+ G KIG G I ++PG +G VS
Sbjct: 143 QHDMVRVKAALKKQLRTRLIGPNCPGIIKPGECKIGIMPGYI--------HKPGRIGIVS 194
Query: 175 KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG 234
+SG ++ E V G + IGGD F G+ D + RF PQ + +V++GE+GG
Sbjct: 195 RSGTLTYEAVFQTTAVGLGQSTCVGIGGDPFNGTNFVDCLERFIADPQTEGIVLIGEIGG 254
Query: 235 RDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRD 294
E +K+ KPVVA+++G A + + GHAGA G +AQ K +AL++
Sbjct: 255 TAEEDAAALIKESGTQKPVVAFIAGLTAPPGR---RMGHAGAIVSGGKGTAQDKIKALKE 311
Query: 295 AGAVVPTSYEAFESAIKETFEK 316
AG V S + + F++
Sbjct: 312 AGVTVCESPAKIGVTMLDVFKQ 333
>sp|Q92I22|SUCD_RICCN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucD PE=3
SV=1
Length = 292
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV++TV EA A V F AA S+ I VV I EG+P
Sbjct: 45 GHTHLDLPVYNTVHEAKAKTGANASVIYVPPGF---AADSILEAIDAEIEVVVCITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + +IGP G I G KIG G I ++ G++G VS+
Sbjct: 102 VLDMVKVKRALVGSKTRLIGPNCPGVITPGECKIGIMPGHI--------HKRGTIGIVSR 153
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G I IGGD G+ D I F + K ++++GE+GG
Sbjct: 154 SGTLTYEAVAQTTAVGLGQSTCIGIGGDPVNGTNFVDCIEMFLKDDETKAIIMIGEIGGN 213
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ A
Sbjct: 214 AEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIVGRTGSAEDKLEALQSA 270
Query: 296 GAVVPTS 302
G ++ S
Sbjct: 271 GVIITRS 277
>sp|P53591|SUCD_COXBU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Coxiella
burnetii (strain RSA 493 / Nine Mile phase I) GN=sucD
PE=3 SV=2
Length = 294
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 15/244 (6%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
GQ + +P+ ++V A AD + F S + A+ +R+V I EG+P
Sbjct: 45 GQSHLGLPIFNSVHEA-VEETSADATMIFVPAPFCKDSIIEAVDA-GVRLVVCITEGIPV 102
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ AY R + V +IGP G I G KIG G I ++ G VG VS+
Sbjct: 103 LDMLEVKAYLRQHPDVRMIGPNCPGVITPGECKIGIMPGHI--------HQRGKVGIVSR 154
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E N ++ G + IGGD PG++ D + F Q + +V++GE+GG
Sbjct: 155 SGTLTYEAVNQTTQMGFGQSTCVGIGGDPIPGTSFIDVLEMFEKDSQTQAIVMVGEIGGT 214
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E E + Q V KPV+++++G A K + GHAGA G +A K AL A
Sbjct: 215 AEEEAAEFI-QSNVKKPVISYIAGVTAPPGK---RMGHAGAIIAGGKGTAADKYAALEAA 270
Query: 296 GAVV 299
G V
Sbjct: 271 GVFV 274
>sp|Q4ULQ8|SUCD_RICFE Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucD PE=3 SV=1
Length = 292
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV++TV EA A V F AA S+ I VV I EG+P
Sbjct: 45 GHTHLDLPVYNTVHEAKAKTGANASVIYVPPGF---AADSILEAIDAEIEVVVCITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + +IGP G I G KIG I+ +++ G++G VS+
Sbjct: 102 VLDMVKVKRALVGSKTRLIGPNCPGVITPGECKIG--------IMPGHIHKRGTIGIVSR 153
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G + IGGD G+ D I F + K ++++GE+GG
Sbjct: 154 SGTLTYEAVAQTTAVGLGQSTCVGIGGDPVNGTNFVDCIDMFLKDDETKAIIMIGEIGGN 213
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E E +KQ K+ KP+V++++G A K + GHAGA G SA+ K +AL+ A
Sbjct: 214 AEEDAAEFIKQSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSA 270
Query: 296 GAVVPTS 302
G + S
Sbjct: 271 GVTITRS 277
>sp|Q9AKE1|SUCD_RICTY Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucD PE=3 SV=1
Length = 292
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV++TV EA A V F AA S+ I VV I EG+P
Sbjct: 45 GHTHLNLPVYNTVHEAKAKTDANASVIYVPPGF---AADSILEAIDAKIEVVVCITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + +IGP G I G KIG G I ++ G +G VS+
Sbjct: 102 VLDMVKVKRALIGSKTRLIGPNCPGVITPGECKIGIMPGHI--------HKTGIIGIVSR 153
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G I IGGD G++ + I F + K ++++GE+GG
Sbjct: 154 SGTLTYEAVAQTTAVGLGQSTCIGIGGDPVNGTSFVECIEMFLQDDETKAIIMIGEIGGN 213
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E + +KQ K+ KP+V++++G A S+ + GHAGA G SA+ K +AL+ A
Sbjct: 214 AEEDAADFIKQSKIKKPIVSFIAGITA---PSDKRMGHAGAIISGGKGSAKDKLEALQSA 270
Query: 296 GAVVPTS 302
G + S
Sbjct: 271 GVTITKS 277
>sp|P53595|MTKB_METEA Malate--CoA ligase subunit alpha OS=Methylobacterium extorquens
(strain ATCC 14718 / DSM 1338 / AM1) GN=mtkB PE=3 SV=2
Length = 296
Score = 92.8 bits (229), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 18/264 (6%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G+ +PV +TV+ A A A I F + AA + M A +++V I +G+P
Sbjct: 45 GKTHCGVPVFNTVKEAVEAT-GATTSITFVAPPFAADAIMEAADA-GLKLVCSITDGIPA 102
Query: 117 ADTKQLIAYARSNNK----VVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGF 172
D ++ Y R K +V+GP G I G +G I+ +Y PG VG
Sbjct: 103 QDMMRVKRYLRRYPKEKRTMVVGPNCAGIISPGKSMLG--------IMPGHIYLPGKVGV 154
Query: 173 VSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGEL 232
+S+SG + E + + GI + IGGD GS+ DH+ F P+ + ++++GE+
Sbjct: 155 ISRSGTLGYEAAAQMKELGIGISTSVGIGGDPINGSSFLDHLALFEQDPETEAVLMIGEI 214
Query: 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
GG E +K+ +KPV+ +V+G A + + GHAGA +SA K + +
Sbjct: 215 GGPQEAEASAWIKE-NFSKPVIGFVAGLTAPKGR---RMGHAGAIISATGDSAAEKAEIM 270
Query: 293 RDAGAVVPTSYEAFESAIKETFEK 316
R G V +F S + + +
Sbjct: 271 RSYGLTVAPDPGSFGSTVADVLAR 294
>sp|O08371|SUCD_RICPR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=sucD PE=3 SV=1
Length = 292
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 15/262 (5%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV++TV EA A V F AA S+ I VV I EG+P
Sbjct: 45 GHTHLNLPVYNTVHEAKAKTGANASVIYVPPGF---AADSILEAIDAKIEVVVCITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + +IGP G I G KIG G I I G +G VS+
Sbjct: 102 VLDMIKVKRALIGSKTRLIGPNCPGVITPGECKIGIMPGHIHKI--------GDIGIVSR 153
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E G + IGGD G++ D I F + K ++++GE+GG
Sbjct: 154 SGTLTYEAVAQTTAAGLGQSTCVGIGGDPVNGTSFVDCIEMFLQDDETKAIIMIGEIGGS 213
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E + +KQ K+ KP+V++++G A K + GHAGA G SA+ K + L+ A
Sbjct: 214 AEEDAADFIKQSKIKKPIVSFIAGITAPADK---RMGHAGAIISGGKGSAEDKVEVLQSA 270
Query: 296 GAVVPTSYEAFESAIKETFEKL 317
G ++ S + + K+
Sbjct: 271 GVIITRSPADIGKTMLDLLNKI 292
>sp|P0AGE9|SUCD_ECOLI Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
(strain K12) GN=sucD PE=1 SV=2
Length = 289
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV +TV EA A A V + F S+ I+++ I EG+P
Sbjct: 45 GTTHLGLPVFNTVREAVAATGATASVIYVPAPF---CKDSILEAIDAGIKLIITITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D + +IGP G I G KIG G I ++PG VG VS+
Sbjct: 102 TLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSR 153
Query: 176 SGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGEL 232
SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+
Sbjct: 154 SGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEI 210
Query: 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
GG E +K+ V KPVV +++G A K + GHAGA G +A K AL
Sbjct: 211 GGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAAL 266
Query: 293 RDAGAVVPTSYEAFESAIKETFE 315
AG S A+K +
Sbjct: 267 EAAGVKTVRSLADIGEALKTVLK 289
>sp|P0AGF0|SUCD_ECOL6 Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=sucD PE=3
SV=2
Length = 289
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV +TV EA A A V + F S+ I+++ I EG+P
Sbjct: 45 GTTHLGLPVFNTVREAVAATGATASVIYVPAPF---CKDSILEAIDAGIKLIITITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D + +IGP G I G KIG G I ++PG VG VS+
Sbjct: 102 TLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSR 153
Query: 176 SGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGEL 232
SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+
Sbjct: 154 SGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEI 210
Query: 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
GG E +K+ V KPVV +++G A K + GHAGA G +A K AL
Sbjct: 211 GGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAAL 266
Query: 293 RDAGAVVPTSYEAFESAIKETFE 315
AG S A+K +
Sbjct: 267 EAAGVKTVRSLADIGEALKTVLK 289
>sp|P0AGF1|SUCD_ECO57 Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Escherichia coli
O157:H7 GN=sucD PE=3 SV=2
Length = 289
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 116/263 (44%), Gaps = 22/263 (8%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV +TV EA A A V + F S+ I+++ I EG+P
Sbjct: 45 GTTHLGLPVFNTVREAVAATGATASVIYVPAPF---CKDSILEAIDAGIKLIITITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D + +IGP G I G KIG G I ++PG VG VS+
Sbjct: 102 TLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHI--------HKPGKVGIVSR 153
Query: 176 SGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGEL 232
SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+
Sbjct: 154 SGTLT---YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEI 210
Query: 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
GG E +K+ V KPVV +++G A K + GHAGA G +A K AL
Sbjct: 211 GGSAEEEAAAYIKE-HVTKPVVGYIAGVTAPKGK---RMGHAGAIIAGGKGTADEKFAAL 266
Query: 293 RDAGAVVPTSYEAFESAIKETFE 315
AG S A+K +
Sbjct: 267 EAAGVKTVRSLADIGEALKTVLK 289
>sp|Q1RH56|SUCD_RICBR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=sucD PE=3 SV=1
Length = 291
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G+ + +P+++TV A A A+ + + AA S + A+ I +V I EG+P
Sbjct: 45 GKTHLDLPIYNTVHEA-KAKTGANASVIYVPPPFAADSILEAIDA-GIEIVVCITEGIPV 102
Query: 117 ADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS 176
D ++ + +IGP G I KIG G I +R GS+G VS+S
Sbjct: 103 LDMVRVKRALVGSRTRLIGPNCPGIITPDECKIGIMPGHI--------HRKGSIGIVSRS 154
Query: 177 GGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD 236
G ++ E V G + IGGD G+ D I F + K ++++GE+GG
Sbjct: 155 GTLTYEAVAQTTAVGLGQSTCVGIGGDPVNGTNFVDCIDMFLQDDETKAIIMIGEIGGDA 214
Query: 237 EYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
E + + +K K+ KP+V++++G A K + GHAGA G SA+ K +AL+ AG
Sbjct: 215 EENAADFIKHSKIKKPIVSFIAGITAPPGK---RMGHAGAIIAGGKGSAEDKLEALQSAG 271
Query: 297 AVVPTS 302
+ S
Sbjct: 272 VTITRS 277
>sp|P45102|SUCD_HAEIN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucD PE=3 SV=1
Length = 293
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 28/271 (10%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMAD--VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114
G + +PV +TV A + +++ S + A ++ A I+++ I EG+
Sbjct: 45 GTTHLGLPVFNTVREAVENTGVTATVIYVPASFCKDAIIEAIDA----GIQLIVCITEGI 100
Query: 115 PEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
P D ++ V+IGP G I KIG I+ +++ G VG VS
Sbjct: 101 PTLDMLKVKQKLNETGVVMIGPNCPGVITPDECKIG--------IMPAHIHKKGKVGIVS 152
Query: 175 KSGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGE 231
+SG ++ Y + + TD G + IGGD PGS+ D + RF P+ + +V++GE
Sbjct: 153 RSGTLT---YEAVKQTTDEGFGQSTCVGIGGDPIPGSSFIDILERFQQDPETEAIVMIGE 209
Query: 232 LGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQA 291
+GG E +K V KPVVA+++G A K + GHAGA G +A K A
Sbjct: 210 IGGSAEEEAAIFIKD-NVTKPVVAYIAGITAPKGK---RMGHAGAIISGGKGTAVEKIAA 265
Query: 292 LRDAGAVVPTSYEAFESAIKETFEKLVEEGK 322
L AG S + I E KL++ K
Sbjct: 266 LEAAGVTCVKSL----AEIGEALRKLLKSSK 292
>sp|Q51567|SUCD_PSEAE Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=sucD PE=3 SV=2
Length = 295
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 116/260 (44%), Gaps = 22/260 (8%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G + +PV +TV EA A A V + F S+ I+++ I EG+P
Sbjct: 45 GTTHLGLPVFNTVKEAVEATGAEASVIYVPAPF---CKDSILEAAFGGIKLIVCITEGIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D +IGP G I G KIG I+ ++ PG VG VS+
Sbjct: 102 TLDMLDAKVKCDELGVRLIGPNCPGVITPGECKIG--------IMPGHIHLPGKVGIVSR 153
Query: 176 SGGMSNELYNTIARVTD---GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGEL 232
SG ++ Y + + TD G + IGGD PGS D + F PQ + +V++GE+
Sbjct: 154 SGTLT---YEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEI 210
Query: 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
GG E A + V KPVV++++G A K + GHAGA G +A K AL
Sbjct: 211 GGSAEEE-AAAFIKANVTKPVVSYIAGVTAPPGK---RMGHAGAIISGGKGTADEKFAAL 266
Query: 293 RDAGAVVPTSYEAFESAIKE 312
+DAG S A+ E
Sbjct: 267 QDAGVKTVRSLADIGKALAE 286
>sp|P53598|SUCA_YEAST Succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=LSC1 PE=1 SV=1
Length = 329
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 15/232 (6%)
Query: 92 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGPATVGGIQ-AGAFKI 149
AA+++ + I + I EG+P+ D + ++ +K ++GP G I A +I
Sbjct: 106 AAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNCPGIINPATKVRI 165
Query: 150 GDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGST 209
G I K+++ G +G +S+SG ++ E + G I +GGD FPG+
Sbjct: 166 G--------IQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSLVIGMGGDAFPGTD 217
Query: 210 LSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNK----PVVAWVSGTCARLF 265
D + F + +++LGE+GG+ E + LK+ ++ PV ++++GT A
Sbjct: 218 FIDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPVASFIAGTVAGQM 277
Query: 266 KSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKL 317
K V+ GH+GA G A++K QALRD G V S A+ + F K
Sbjct: 278 KG-VRMGHSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQFAKF 328
>sp|P71558|SUCD_MYCTU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium
tuberculosis GN=sucD PE=3 SV=1
Length = 303
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G I +PV +V A ADV I F A + + A+ I ++ +I EG+P
Sbjct: 57 GGRLIKLPVFGSV-AEAMEKTGADVSIIFVPPTFAKDAIIEAIDA-EIPLLVVITEGIPV 114
Query: 117 ADTKQLIAY--ARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
DT AY + +IGP G I G ++ I + PG +G VS
Sbjct: 115 QDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQ--------SLAGITPANITGPGPIGLVS 166
Query: 175 KSGGMSNELYNTIARVTD-GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG 233
KSG ++ Y + + D G I IGGD G+T D I F P K++V++GE+G
Sbjct: 167 KSGTLT---YQMMFELRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIG 223
Query: 234 GRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALR 293
G E + +K V+KPVV +V+G A K+ GHAGA G +A AK +AL
Sbjct: 224 GDAEERAADFIKT-NVSKPVVGYVAGFTAPEGKT---MGHAGAIVSGSSGTAAAKQEALE 279
Query: 294 DAGAVVPTSYEAFESAIKETFEKL 317
AG V + A + +E L
Sbjct: 280 AAGVKVGKTPSATAALAREILLSL 303
>sp|Q7U0Z0|SUCD_MYCBO Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=sucD PE=3
SV=1
Length = 303
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 20/264 (7%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G I +PV +V A ADV I F A + + A+ I ++ +I EG+P
Sbjct: 57 GGRLIKLPVFGSV-AEAMEKTGADVSIIFVPPTFAKDAIIEAIDA-EIPLLVVITEGIPV 114
Query: 117 ADTKQLIAY--ARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS 174
DT AY + +IGP G I G ++ I + PG +G VS
Sbjct: 115 QDTAYAWAYNLEAGHKTRIIGPNCPGIISPGQ--------SLAGITPANITGPGPIGLVS 166
Query: 175 KSGGMSNELYNTIARVTD-GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG 233
KSG ++ Y + + D G I IGGD G+T D I F P K++V++GE+G
Sbjct: 167 KSGTLT---YQMMFELRDLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIG 223
Query: 234 GRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALR 293
G E + +K V+KPVV +V+G A K+ GHAGA G +A AK +AL
Sbjct: 224 GDAEERAADFIKT-NVSKPVVGYVAGFTAPEGKT---MGHAGAIVSGSSGTAAAKQEALE 279
Query: 294 DAGAVVPTSYEAFESAIKETFEKL 317
AG V + A + +E L
Sbjct: 280 AAGVKVGKTPSATAALAREILLSL 303
>sp|Q5HPU4|SUCD_STAEQ Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3
SV=1
Length = 302
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 131/286 (45%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV++TVE
Sbjct: 19 STALFHT------KQMLDYG------TQIVAGV-TPGK-------GGQVVEGVPVYNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A+V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGANVSVVYVPAPFAADSIIEA-ADADLDMVICITEHIPVVDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E + +K+ +N
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKE-NMN 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A K + L D G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTASEKIKTLNDCG 270
>sp|Q8CPH4|SUCD_STAES Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1
Length = 302
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV++TVE
Sbjct: 19 STALFHT------KQMLDYG------TQIVAGV-TPGK-------GGQVVEGVPVYNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A+V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGANVSVVYVPAPFAADSIIEA-ADADLDMVICITEHIPVVDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E + +K+ +N
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKE-NMN 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPV+ ++ G A K + GHAGA G +A K + L D G
Sbjct: 228 KPVIGFIGGQTAPPGK---RMGHAGAIISGGKGTASEKIKTLNDCG 270
>sp|P13086|SUCA_RAT Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Suclg1 PE=2 SV=2
Length = 346
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 19/262 (7%)
Query: 60 EIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEAD 118
+ +PV +TV EA A V F +AA + + P +V I EG+P+ D
Sbjct: 95 HLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIP---LVVCITEGIPQQD 151
Query: 119 TKQLI-AYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSG 177
++ R +IGP G I G KIG G I ++ G +G VS+SG
Sbjct: 152 MVRVKHKLTRQGKTRLIGPNCPGIINPGECKIGIMPGHI--------HKKGRIGIVSRSG 203
Query: 178 GMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDE 237
++ E + +V G I IGGD F G+ D + F P + +V++GE+GG E
Sbjct: 204 TLTYEAVHQTTQVGLGQSLCIGIGGDPFNGTNFIDCLDVFLKDPATEGIVLIGEIGGHAE 263
Query: 238 YSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRD 294
+ E LK+ G KPVV++++G A + + GHAGA G A+ K AL+
Sbjct: 264 ENAAEFLKEHNSGPKAKPVVSFIAGITAPPGR---RMGHAGAIIAGGKGGAKEKISALQS 320
Query: 295 AGAVVPTSYEAFESAIKETFEK 316
AG +V S + + + FEK
Sbjct: 321 AGVIVSMSPAQLGTCMYKEFEK 342
>sp|P36967|SUCA_DICDI Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=scsA PE=1 SV=3
Length = 315
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 15/262 (5%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
GQ+ + +PV +TV+ A A I +AAA A + + +V I EG+P+
Sbjct: 64 GQKHLDLPVFNTVKEAKEATGANATVIYVPPPHAAAAIKEAIDAE--MELVVCITEGIPQ 121
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ NK +IGP G I+ G KIG G I ++PG +G VS+
Sbjct: 122 QDMVKVKYLLNKQNKTRLIGPNCPGIIKPGECKIGIMPGHI--------HKPGKIGIVSR 173
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E V G I IGGD F G+ D + F PQ + ++++GE+GG
Sbjct: 174 SGTLTYEAVAQTTAVGLGQSTCIGIGGDPFNGTNFIDCLKMFTQDPQTEGIILIGEIGGE 233
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E + L +KPVV++++G A + + GHAGA G A +K +AL+ A
Sbjct: 234 AEEEAAQWLIDNPTDKPVVSFIAGLSAPPGR---RMGHAGAIISGGKGDANSKIEALKAA 290
Query: 296 GAVVPTSYEAF-ESAIKETFEK 316
G V S E+ +++ EK
Sbjct: 291 GVTVTFSPAKLGETILQKMNEK 312
>sp|O13750|SUCA_SCHPO Probable succinyl-CoA ligase [ADP-forming] subunit alpha,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC16E8.17c PE=3 SV=1
Length = 331
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 16/219 (7%)
Query: 104 IRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHC 162
+ ++ I EG+P+ D ++ ++ +K ++GP G I+ G KIG I+
Sbjct: 122 VPLIVAITEGIPQHDMLRVSDILKTQSKSRLVGPNCPGIIRPGQCKIG--------IMPS 173
Query: 163 KLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ 222
+++PG +G VS+SG ++ E N + G I IGGD FPG+ D + F + P
Sbjct: 174 HIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLVIGIGGDPFPGTNFIDALKLFLDDPN 233
Query: 223 VKMMVVLGELGGRDEYSLVEALKQGKVN----KPVVAWVSGTCARLFKSEVQFGHAGAKS 278
+ ++++GE+GG E E ++ + KPVV++++G A + + GHAGA
Sbjct: 234 TQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPVVSFIAGATAPKGR---RMGHAGAIV 290
Query: 279 GGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKL 317
G +A AK +AL AG + S S I E KL
Sbjct: 291 AGGKGTAAAKFEALEAAGVRISRSPATLGSLIVEELNKL 329
>sp|P09143|SUCD_THETH Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Thermus
thermophilus GN=sucD PE=1 SV=1
Length = 288
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 28/303 (9%)
Query: 12 QALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEA 71
Q + Q ++MLD+ T VAG+ PG G E + +PV+ TV+
Sbjct: 13 QGITGREGQFHTKQMLDYG------TKIVAGV-TPGKGG-------TEVLGVPVYDTVKE 58
Query: 72 ACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNK 131
A A H + D I F +AA +++ A I ++ +I EG+P D + + ++
Sbjct: 59 AVAHHEV-DASIIFVPAPAAADAALEAAHA-GIPLIVLITEGIPTLDMVRAVEEIKALGS 116
Query: 132 VVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVT 191
+IG G I A KIG I+ +++ G VG +S+SG ++ E +++
Sbjct: 117 RLIGGNCPGIISAEETKIG--------IMPGHVFKRGRVGIISRSGTLTYEAAAALSQAG 168
Query: 192 DGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNK 251
G + IGGD G+T D + FN P+ + +V++GE+GG DE +K + K
Sbjct: 169 LGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD-HMKK 227
Query: 252 PVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIK 311
PVV ++ G A K + GHAGA G + + ++K +A +AG V + + +K
Sbjct: 228 PVVGFIGGRSAPKGK---RMGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVK 284
Query: 312 ETF 314
+
Sbjct: 285 KAL 287
>sp|Q6GHI9|SUCD_STAAR Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=sucD PE=3 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P99070|SUCD_STAAN Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain N315) GN=sucD PE=1 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P66866|SUCD_STAAM Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=sucD PE=1 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q5HGI6|SUCD_STAAC Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain COL) GN=sucD PE=3 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q8NX01|SUCD_STAAW Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=sucD PE=3 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|Q6G9W7|SUCD_STAAS Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=sucD PE=3 SV=1
Length = 302
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 127/286 (44%), Gaps = 34/286 (11%)
Query: 11 TQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE 70
+ ALF+ ++MLD+ T VAG+ PG GQ +PV +TVE
Sbjct: 19 STALFHT------KQMLDYG------TKIVAGV-TPGK-------GGQVVEGVPVFNTVE 58
Query: 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130
A A V + + AA S + A + +V I E +P D ++ Y +
Sbjct: 59 EA-KNETGATVSVIYVPAPFAADSILEA-ADADLDMVICITEHIPVLDMVKVKRYLQGRK 116
Query: 131 KVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARV 190
++GP G I A KIG G I ++ G VG VS+SG ++ E + +
Sbjct: 117 TRLVGPNCPGVITADECKIGIMPGYI--------HKKGHVGVVSRSGTLTYEAVHQLTEE 168
Query: 191 TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250
G + IGGD G+ D + FN + K +V++GE+GG E E +K +
Sbjct: 169 GIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK-ANMT 227
Query: 251 KPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG 296
KPVV ++ G A K + GHAGA G +A+ K + L G
Sbjct: 228 KPVVGFIGGQTAPPGK---RMGHAGAIISGGKGTAEEKIKTLNSCG 270
>sp|P53596|SUCA_CAEEL Probable succinyl-CoA ligase [ADP/GDP-forming] subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=C05G5.4 PE=3
SV=1
Length = 322
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 57 GQEEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116
G E + +PV V A AD + + SAA S++ I +V I EG+P+
Sbjct: 70 GTEHLGLPVFKNVSEA-RNKTGADASVIYVP-ASAAGSAIEEAMDAEIPLVVCITEGIPQ 127
Query: 117 ADTKQLIAYARSNNKV-VIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + NK ++GP G I A KIG G I ++ G +G VS+
Sbjct: 128 HDMVRVKSRLLKQNKTRLVGPNCPGIISADQCKIGIMPGHI--------HKRGCIGIVSR 179
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E + +V G + IGGD F G+ D + F P+ K ++++GE+GG
Sbjct: 180 SGTLTYEAVHQTTQVGFGQTLCVGIGGDPFNGTNFIDCLNVFLEDPETKGIILIGEIGGS 239
Query: 236 DEYSLVEALKQ---GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAL 292
E LK+ G KPVV++++G A + + GHAGA G +A K AL
Sbjct: 240 AEEEAAAYLKEHNSGANRKPVVSFIAGVTAPPGR---RMGHAGAIISGGKGTAADKINAL 296
Query: 293 RDAGAVVPTSYEAFESAIKETF 314
R+AG VV S +++ F
Sbjct: 297 REAGVVVTDSPAKLGTSMATAF 318
>sp|P80865|SUCD_BACSU Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus
subtilis (strain 168) GN=sucD PE=1 SV=3
Length = 300
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 116/265 (43%), Gaps = 20/265 (7%)
Query: 57 GQEEIAIPVHSTV-EAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115
G E +PV +TV EA A V + F AA ++ + +V I E +P
Sbjct: 45 GTEAEGVPVFNTVAEAVQTTGANASVIYVPAPF---AADAIMEAVDAELDLVICITEHIP 101
Query: 116 EADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSK 175
D ++ + +IGP G I KIG G I ++ G VG VS+
Sbjct: 102 VLDMVKVKRFMEGKKTRLIGPNCPGVITPEECKIGIMPGYI--------HKKGHVGVVSR 153
Query: 176 SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGR 235
SG ++ E + ++ G + IGGD G+ D + FN P ++++GE+GG
Sbjct: 154 SGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPDTHAVIMIGEIGGT 213
Query: 236 DEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDA 295
E E +K + KPVV ++ G A K + GHAGA G +A K + L
Sbjct: 214 AEEEAAEWVKA-NMTKPVVGFIGGKTAPPGK---RMGHAGAIISGGKGTADEKIKTLNAC 269
Query: 296 GAVVPTSYEAFESAIKETFEKLVEE 320
G V + S + ET K+++E
Sbjct: 270 GIEVAET----PSVMGETLIKVLKE 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,296,047
Number of Sequences: 539616
Number of extensions: 9968056
Number of successful extensions: 26563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 26388
Number of HSP's gapped (non-prelim): 111
length of query: 608
length of database: 191,569,459
effective HSP length: 123
effective length of query: 485
effective length of database: 125,196,691
effective search space: 60720395135
effective search space used: 60720395135
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)