Query 007327
Match_columns 608
No_of_seqs 333 out of 2819
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 22:59:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007327.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007327hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mwd_B ATP-citrate synthase; A 100.0 7.2E-71 2.4E-75 578.6 34.4 327 4-333 4-334 (334)
2 3pff_A ATP-citrate synthase; p 100.0 7.6E-65 2.6E-69 583.1 33.5 322 5-331 491-818 (829)
3 2yv2_A Succinyl-COA synthetase 100.0 1.4E-61 4.6E-66 503.7 29.4 286 3-315 6-296 (297)
4 2fp4_A Succinyl-COA ligase [GD 100.0 4.5E-61 1.6E-65 501.2 29.7 285 3-316 7-301 (305)
5 2yv1_A Succinyl-COA ligase [AD 100.0 1.2E-60 4.2E-65 495.9 28.8 283 3-315 6-293 (294)
6 1oi7_A Succinyl-COA synthetase 100.0 5.4E-60 1.8E-64 489.7 29.1 282 5-314 2-287 (288)
7 2csu_A 457AA long hypothetical 100.0 1.6E-59 5.6E-64 515.1 20.2 305 3-364 2-319 (457)
8 2nu8_A Succinyl-COA ligase [AD 100.0 9.3E-58 3.2E-62 473.1 30.0 281 5-314 2-287 (288)
9 2h12_A Citrate synthase; acido 100.0 2.2E-56 7.5E-61 482.5 20.3 237 335-599 164-418 (436)
10 3msu_A Citrate synthase; helix 100.0 4.6E-56 1.6E-60 477.3 16.4 238 334-599 161-415 (427)
11 3hwk_A Methylcitrate synthase; 100.0 1.1E-55 3.8E-60 472.6 17.7 244 323-599 151-398 (414)
12 2c6x_A Citrate synthase 1; tri 100.0 2.1E-55 7E-60 465.8 19.1 237 335-600 109-352 (363)
13 2p2w_A Citrate synthase; trans 100.0 3.9E-55 1.3E-59 464.7 20.5 234 335-599 110-345 (367)
14 1iom_A Citrate synthase; open 100.0 6.9E-55 2.4E-59 464.3 20.9 237 335-599 116-358 (377)
15 1o7x_A Citrate synthase; lyase 100.0 4.8E-55 1.6E-59 465.5 19.4 238 334-599 114-359 (377)
16 3l96_A Citrate synthase; quate 100.0 1.2E-56 4.2E-61 482.2 6.7 251 321-599 142-408 (426)
17 3tqg_A 2-methylcitrate synthas 100.0 1E-55 3.5E-60 469.0 13.1 235 335-599 117-356 (375)
18 1aj8_A Citrate synthase; hyper 100.0 6.8E-55 2.3E-59 463.4 19.2 235 335-599 115-352 (371)
19 1vgm_A 378AA long hypothetical 100.0 6.4E-55 2.2E-59 464.7 18.7 238 334-599 115-360 (378)
20 1vgp_A 373AA long hypothetical 100.0 1.6E-54 5.6E-59 461.2 20.7 231 335-593 112-350 (373)
21 1a59_A Citrate synthase; cold- 100.0 1.2E-54 4.2E-59 463.3 19.0 236 335-599 118-365 (378)
22 2ifc_A Citrate synthase; oxalo 100.0 1E-54 3.6E-59 464.0 17.9 237 335-599 120-366 (385)
23 3o8j_A 2-methylcitrate synthas 100.0 5E-55 1.7E-59 466.9 13.0 242 323-593 135-380 (404)
24 2ibp_A Citrate synthase; disul 100.0 4.7E-54 1.6E-58 461.5 18.2 235 336-599 147-391 (409)
25 1csh_A Citrate synthase; lyase 100.0 1.8E-53 6.3E-58 460.0 19.4 240 335-601 168-422 (435)
26 3dmy_A Protein FDRA; predicted 100.0 5.1E-45 1.8E-49 398.9 18.5 242 62-358 20-269 (480)
27 1y81_A Conserved hypothetical 99.8 1.2E-20 4.2E-25 174.3 9.0 117 4-146 9-132 (138)
28 3ff4_A Uncharacterized protein 99.8 4.7E-21 1.6E-25 173.4 5.8 107 8-142 3-116 (122)
29 1iuk_A Hypothetical protein TT 99.8 2.6E-21 8.8E-26 179.3 3.0 119 4-146 7-133 (140)
30 2duw_A Putative COA-binding pr 99.8 3.7E-20 1.3E-24 172.5 5.3 119 4-146 7-133 (145)
31 2d59_A Hypothetical protein PH 99.8 5.5E-20 1.9E-24 171.1 5.8 116 4-145 16-139 (144)
32 3ijp_A DHPR, dihydrodipicolina 98.0 1.1E-05 3.8E-10 82.7 9.4 120 11-141 22-149 (288)
33 4f3y_A DHPR, dihydrodipicolina 97.8 3.6E-05 1.2E-09 78.5 8.4 119 10-141 8-134 (272)
34 1dih_A Dihydrodipicolinate red 97.7 4.3E-05 1.5E-09 77.9 6.8 122 9-142 5-134 (273)
35 3ufx_B Succinyl-COA synthetase 97.6 9.8E-05 3.3E-09 79.2 8.9 123 166-312 246-372 (397)
36 2csu_A 457AA long hypothetical 97.6 0.00066 2.2E-08 74.1 14.6 127 166-315 292-446 (457)
37 2fp4_B Succinyl-COA ligase [GD 97.3 0.0017 5.7E-08 69.6 12.8 124 166-313 262-391 (395)
38 2nu8_B SCS-beta, succinyl-COA 97.3 0.0026 9E-08 67.9 13.9 124 166-313 255-384 (388)
39 3qy9_A DHPR, dihydrodipicolina 97.1 0.00062 2.1E-08 68.2 7.2 105 10-141 4-113 (243)
40 3dmy_A Protein FDRA; predicted 96.8 0.05 1.7E-06 59.4 19.2 129 166-315 248-413 (480)
41 1p9l_A Dihydrodipicolinate red 96.8 0.0089 3E-07 59.8 11.9 101 11-141 2-109 (245)
42 4ew6_A D-galactose-1-dehydroge 96.7 0.0058 2E-07 63.5 10.1 111 8-137 24-140 (330)
43 3evn_A Oxidoreductase, GFO/IDH 96.6 0.011 3.7E-07 61.1 11.4 119 8-138 4-127 (329)
44 3q2i_A Dehydrogenase; rossmann 96.5 0.0043 1.5E-07 64.8 7.6 118 9-138 13-135 (354)
45 3c1a_A Putative oxidoreductase 96.5 0.012 4.2E-07 60.2 11.0 117 8-138 9-129 (315)
46 3db2_A Putative NADPH-dependen 96.4 0.0033 1.1E-07 65.6 6.6 119 8-138 4-126 (354)
47 3kux_A Putative oxidoreductase 96.4 0.0074 2.5E-07 63.0 9.1 116 8-137 6-126 (352)
48 1lc0_A Biliverdin reductase A; 96.4 0.0094 3.2E-07 60.8 9.6 114 8-138 6-125 (294)
49 3i23_A Oxidoreductase, GFO/IDH 96.4 0.0054 1.8E-07 64.0 7.5 115 10-137 3-124 (349)
50 2dc1_A L-aspartate dehydrogena 96.4 0.0064 2.2E-07 59.9 7.6 110 11-143 2-116 (236)
51 3e18_A Oxidoreductase; dehydro 96.3 0.0059 2E-07 64.1 7.2 118 8-138 4-125 (359)
52 3o9z_A Lipopolysaccaride biosy 96.2 0.023 7.7E-07 58.5 11.3 117 9-138 3-132 (312)
53 3moi_A Probable dehydrogenase; 96.2 0.0073 2.5E-07 64.0 7.5 117 9-138 2-124 (387)
54 3fhl_A Putative oxidoreductase 96.2 0.0092 3.2E-07 62.6 8.2 117 8-138 4-125 (362)
55 3e9m_A Oxidoreductase, GFO/IDH 96.1 0.0092 3.1E-07 61.8 7.8 119 8-138 4-127 (330)
56 3oa2_A WBPB; oxidoreductase, s 96.1 0.029 1E-06 57.8 11.4 116 10-138 4-133 (318)
57 3euw_A MYO-inositol dehydrogen 96.1 0.0051 1.7E-07 63.9 5.4 118 9-138 4-125 (344)
58 4hkt_A Inositol 2-dehydrogenas 96.0 0.0073 2.5E-07 62.4 6.3 115 10-137 4-122 (331)
59 3ec7_A Putative dehydrogenase; 96.0 0.0085 2.9E-07 62.8 6.9 118 8-137 22-147 (357)
60 3keo_A Redox-sensing transcrip 96.0 0.015 5.2E-07 56.8 8.2 89 11-112 86-181 (212)
61 1f06_A MESO-diaminopimelate D- 96.0 0.011 3.7E-07 61.2 7.6 110 8-136 2-117 (320)
62 3f4l_A Putative oxidoreductase 96.0 0.01 3.6E-07 61.7 7.3 117 9-137 2-124 (345)
63 1tlt_A Putative oxidoreductase 96.0 0.02 6.7E-07 58.8 9.2 112 8-133 4-119 (319)
64 3e82_A Putative oxidoreductase 95.9 0.01 3.5E-07 62.4 7.0 116 8-137 6-126 (364)
65 3m2t_A Probable dehydrogenase; 95.9 0.017 5.9E-07 60.5 8.8 119 8-137 4-127 (359)
66 2p2s_A Putative oxidoreductase 95.9 0.028 9.6E-07 58.0 10.0 115 8-134 3-121 (336)
67 3cea_A MYO-inositol 2-dehydrog 95.9 0.026 8.8E-07 58.4 9.8 118 8-137 7-131 (346)
68 3l6d_A Putative oxidoreductase 95.9 0.013 4.5E-07 60.0 7.4 120 1-135 1-124 (306)
69 1zh8_A Oxidoreductase; TM0312, 95.8 0.011 3.9E-07 61.4 6.8 118 8-138 17-142 (340)
70 3ezy_A Dehydrogenase; structur 95.8 0.0099 3.4E-07 61.8 6.3 117 10-138 3-124 (344)
71 4gmf_A Yersiniabactin biosynth 95.8 0.0083 2.8E-07 63.6 5.6 114 9-136 7-126 (372)
72 3rc1_A Sugar 3-ketoreductase; 95.7 0.02 7E-07 59.7 8.1 116 9-136 27-147 (350)
73 3u3x_A Oxidoreductase; structu 95.7 0.027 9.2E-07 59.1 9.0 120 6-137 23-147 (361)
74 3tqg_A 2-methylcitrate synthas 95.7 0.032 1.1E-06 59.1 9.5 108 349-462 13-129 (375)
75 2h12_A Citrate synthase; acido 95.7 0.046 1.6E-06 59.0 10.8 91 349-445 56-150 (436)
76 1ydw_A AX110P-like protein; st 95.6 0.019 6.5E-07 60.0 7.6 119 8-138 5-131 (362)
77 2ho3_A Oxidoreductase, GFO/IDH 95.6 0.023 7.9E-07 58.4 8.0 116 10-138 2-122 (325)
78 3mz0_A Inositol 2-dehydrogenas 95.5 0.011 3.6E-07 61.5 5.3 116 10-137 3-126 (344)
79 3btv_A Galactose/lactose metab 95.5 0.017 6E-07 62.2 7.0 115 9-135 20-152 (438)
80 3gdo_A Uncharacterized oxidore 95.5 0.017 5.9E-07 60.4 6.7 116 8-137 4-124 (358)
81 3uuw_A Putative oxidoreductase 95.4 0.026 8.7E-07 57.6 7.6 113 7-133 4-120 (308)
82 4e21_A 6-phosphogluconate dehy 95.3 0.049 1.7E-06 57.3 9.4 117 7-136 20-139 (358)
83 4dll_A 2-hydroxy-3-oxopropiona 95.3 0.056 1.9E-06 55.7 9.7 112 9-135 31-147 (320)
84 3ohs_X Trans-1,2-dihydrobenzen 95.3 0.025 8.5E-07 58.5 6.9 119 9-137 2-125 (334)
85 4fb5_A Probable oxidoreductase 95.2 0.038 1.3E-06 57.7 8.3 122 8-138 24-154 (393)
86 3dty_A Oxidoreductase, GFO/IDH 95.2 0.05 1.7E-06 57.7 9.3 122 7-138 10-145 (398)
87 1h6d_A Precursor form of gluco 95.2 0.021 7.2E-07 61.6 6.3 118 9-138 83-210 (433)
88 1yb4_A Tartronic semialdehyde 95.2 0.086 2.9E-06 53.0 10.4 110 9-134 3-118 (295)
89 1iom_A Citrate synthase; open 95.1 0.033 1.1E-06 59.0 7.2 90 349-444 9-102 (377)
90 3qha_A Putative oxidoreductase 95.1 0.14 4.9E-06 51.9 11.8 111 9-135 15-128 (296)
91 1vgp_A 373AA long hypothetical 95.0 0.034 1.2E-06 58.9 7.1 90 349-444 9-102 (373)
92 2p2w_A Citrate synthase; trans 95.0 0.016 5.6E-07 61.2 4.5 92 349-446 8-103 (367)
93 3bio_A Oxidoreductase, GFO/IDH 94.9 0.025 8.4E-07 58.1 5.5 112 8-136 8-124 (304)
94 3o8j_A 2-methylcitrate synthas 94.8 0.027 9.4E-07 60.1 5.6 90 349-444 39-132 (404)
95 3l96_A Citrate synthase; quate 94.7 0.18 6.3E-06 54.1 11.9 92 349-446 48-143 (426)
96 2g0t_A Conserved hypothetical 94.7 0.076 2.6E-06 55.7 8.7 125 1-136 13-150 (350)
97 2h78_A Hibadh, 3-hydroxyisobut 94.7 0.16 5.3E-06 51.5 10.8 111 10-135 4-120 (302)
98 3hwk_A Methylcitrate synthase; 94.6 0.035 1.2E-06 59.5 6.0 108 349-462 55-172 (414)
99 4had_A Probable oxidoreductase 94.6 0.037 1.3E-06 57.4 6.1 114 11-137 25-145 (350)
100 3pdu_A 3-hydroxyisobutyrate de 94.6 0.14 4.8E-06 51.5 10.3 111 10-135 2-118 (287)
101 2glx_A 1,5-anhydro-D-fructose 94.6 0.07 2.4E-06 54.8 8.1 114 11-138 2-122 (332)
102 3pef_A 6-phosphogluconate dehy 94.6 0.094 3.2E-06 52.8 8.8 111 10-135 2-118 (287)
103 3v5n_A Oxidoreductase; structu 94.5 0.093 3.2E-06 56.1 9.1 120 8-138 36-170 (417)
104 2nvw_A Galactose/lactose metab 94.5 0.057 1.9E-06 59.0 7.5 118 8-137 38-174 (479)
105 1j5p_A Aspartate dehydrogenase 94.4 0.064 2.2E-06 53.7 7.0 73 59-137 45-119 (253)
106 3doj_A AT3G25530, dehydrogenas 94.4 0.15 5E-06 52.2 9.9 113 8-135 20-138 (310)
107 2gf2_A Hibadh, 3-hydroxyisobut 94.3 0.2 6.7E-06 50.4 10.7 109 10-133 1-115 (296)
108 2zyd_A 6-phosphogluconate dehy 94.3 0.091 3.1E-06 57.5 8.5 118 7-135 13-136 (480)
109 1a59_A Citrate synthase; cold- 94.2 0.035 1.2E-06 59.0 4.7 90 349-444 11-104 (378)
110 2c6x_A Citrate synthase 1; tri 94.1 0.048 1.7E-06 57.5 5.6 108 349-462 7-121 (363)
111 4gbj_A 6-phosphogluconate dehy 94.1 0.13 4.6E-06 52.4 8.8 110 11-135 7-120 (297)
112 3obb_A Probable 3-hydroxyisobu 94.0 0.22 7.6E-06 50.9 10.2 109 11-134 5-119 (300)
113 2ixa_A Alpha-N-acetylgalactosa 93.8 0.12 4.2E-06 55.6 8.3 119 8-138 19-151 (444)
114 3cky_A 2-hydroxymethyl glutara 93.7 0.18 6.2E-06 50.8 8.9 110 8-134 3-120 (301)
115 3qsg_A NAD-binding phosphogluc 93.4 0.12 4E-06 53.1 7.0 112 10-135 25-142 (312)
116 2p4q_A 6-phosphogluconate dehy 93.4 0.22 7.6E-06 54.6 9.6 117 10-135 11-132 (497)
117 3nkl_A UDP-D-quinovosamine 4-d 93.3 0.15 5.2E-06 45.3 6.8 86 9-109 4-98 (141)
118 2uyy_A N-PAC protein; long-cha 93.3 0.34 1.2E-05 49.3 10.1 112 9-135 30-147 (316)
119 1o7x_A Citrate synthase; lyase 93.2 0.043 1.5E-06 58.2 3.3 108 349-462 10-127 (377)
120 1vpd_A Tartronate semialdehyde 93.1 0.22 7.4E-06 50.1 8.3 109 10-135 6-122 (299)
121 2vt3_A REX, redox-sensing tran 93.1 0.11 3.8E-06 50.7 5.9 66 36-112 110-178 (215)
122 4gwg_A 6-phosphogluconate dehy 92.9 0.25 8.5E-06 54.1 9.0 118 10-136 5-127 (484)
123 2dt5_A AT-rich DNA-binding pro 92.9 0.27 9.2E-06 47.8 8.3 67 36-112 104-173 (211)
124 2iz1_A 6-phosphogluconate dehy 92.8 0.22 7.7E-06 54.2 8.5 115 10-135 6-126 (474)
125 1aj8_A Citrate synthase; hyper 92.8 0.052 1.8E-06 57.4 3.2 90 349-444 7-100 (371)
126 1csh_A Citrate synthase; lyase 92.7 0.064 2.2E-06 57.9 3.9 97 345-446 41-148 (435)
127 1vgm_A 378AA long hypothetical 92.7 0.058 2E-06 57.2 3.4 108 349-462 11-128 (378)
128 3ba1_A HPPR, hydroxyphenylpyru 92.4 0.12 4E-06 53.9 5.3 108 6-136 161-275 (333)
129 3upl_A Oxidoreductase; rossman 92.3 0.079 2.7E-06 57.4 4.0 70 63-135 93-163 (446)
130 2pgd_A 6-phosphogluconate dehy 92.3 0.35 1.2E-05 52.7 9.2 116 10-135 3-124 (482)
131 2ifc_A Citrate synthase; oxalo 92.1 0.08 2.7E-06 56.3 3.6 90 349-444 13-107 (385)
132 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.1 0.31 1.1E-05 53.1 8.4 116 10-135 2-126 (478)
133 3g0o_A 3-hydroxyisobutyrate de 92.0 0.21 7.3E-06 50.7 6.6 112 9-135 7-125 (303)
134 3msu_A Citrate synthase; helix 91.7 0.091 3.1E-06 56.5 3.5 108 349-462 57-174 (427)
135 2cvz_A Dehydrogenase, 3-hydrox 91.7 0.53 1.8E-05 46.8 9.0 108 10-134 2-112 (289)
136 4ezb_A Uncharacterized conserv 91.6 0.33 1.1E-05 49.9 7.5 109 10-135 25-144 (317)
137 3tri_A Pyrroline-5-carboxylate 91.6 0.51 1.8E-05 47.5 8.9 97 9-117 3-104 (280)
138 2ibp_A Citrate synthase; disul 90.9 0.069 2.4E-06 57.2 1.5 91 349-445 28-121 (409)
139 3mwd_A ATP-citrate synthase; A 90.9 0.52 1.8E-05 50.7 8.4 96 166-263 271-385 (425)
140 3oqb_A Oxidoreductase; structu 90.4 0.51 1.7E-05 49.4 7.8 75 61-138 66-143 (383)
141 2rcy_A Pyrroline carboxylate r 90.2 0.87 3E-05 44.6 8.9 91 9-117 4-97 (262)
142 3do5_A HOM, homoserine dehydro 90.0 0.97 3.3E-05 46.8 9.3 152 64-247 65-224 (327)
143 4gqa_A NAD binding oxidoreduct 89.9 0.56 1.9E-05 49.6 7.7 122 10-138 27-156 (412)
144 3uw3_A Aspartate-semialdehyde 89.4 2.2 7.4E-05 45.1 11.5 118 9-139 4-139 (377)
145 3b1f_A Putative prephenate deh 89.0 0.41 1.4E-05 47.9 5.5 113 9-135 6-124 (290)
146 3abi_A Putative uncharacterize 88.8 0.14 4.7E-06 53.7 1.8 62 66-134 68-129 (365)
147 4dgs_A Dehydrogenase; structur 88.6 0.8 2.7E-05 47.7 7.5 108 7-134 169-280 (340)
148 2ahr_A Putative pyrroline carb 88.4 0.73 2.5E-05 45.3 6.7 92 9-117 3-96 (259)
149 1z82_A Glycerol-3-phosphate de 88.3 0.21 7.2E-06 51.5 2.8 93 8-116 13-116 (335)
150 2pv7_A T-protein [includes: ch 88.3 3.7 0.00013 41.4 12.1 83 11-122 23-109 (298)
151 3ip3_A Oxidoreductase, putativ 88.0 0.56 1.9E-05 48.2 5.8 79 63-144 53-133 (337)
152 3pzr_A Aspartate-semialdehyde 87.5 3.2 0.00011 43.7 11.3 117 10-139 1-135 (370)
153 1qp8_A Formate dehydrogenase; 87.2 0.93 3.2E-05 46.3 6.8 105 7-132 122-230 (303)
154 1mx3_A CTBP1, C-terminal bindi 86.8 0.58 2E-05 48.9 5.1 110 7-132 166-279 (347)
155 2z2v_A Hypothetical protein PH 86.8 0.26 8.8E-06 51.9 2.4 62 66-134 68-129 (365)
156 3ggo_A Prephenate dehydrogenas 86.7 0.99 3.4E-05 46.3 6.8 109 10-135 34-148 (314)
157 1vm6_A DHPR, dihydrodipicolina 86.7 0.62 2.1E-05 45.8 4.9 60 79-141 54-114 (228)
158 2obn_A Hypothetical protein; s 86.0 1.3 4.3E-05 46.4 7.1 106 18-135 21-132 (349)
159 3gvx_A Glycerate dehydrogenase 86.0 0.71 2.4E-05 47.0 5.1 107 7-133 120-230 (290)
160 3fr7_A Putative ketol-acid red 85.8 0.21 7.2E-06 54.6 1.1 93 10-117 55-160 (525)
161 4h3v_A Oxidoreductase domain p 84.7 2.1 7.1E-05 44.2 8.1 75 61-138 58-138 (390)
162 2izz_A Pyrroline-5-carboxylate 84.4 2.2 7.7E-05 43.5 8.1 101 6-117 19-124 (322)
163 3ktd_A Prephenate dehydrogenas 84.2 0.6 2E-05 48.7 3.6 100 10-122 9-111 (341)
164 3pp8_A Glyoxylate/hydroxypyruv 84.1 1.2 4.3E-05 45.7 6.0 106 7-132 137-249 (315)
165 1i36_A Conserved hypothetical 83.7 1.7 5.8E-05 42.7 6.6 102 10-129 1-105 (264)
166 1sc6_A PGDH, D-3-phosphoglycer 82.6 1.1 3.7E-05 47.8 5.0 104 7-132 143-253 (404)
167 1dxy_A D-2-hydroxyisocaproate 82.5 0.97 3.3E-05 46.8 4.4 105 7-133 143-254 (333)
168 3gt0_A Pyrroline-5-carboxylate 82.0 1.9 6.6E-05 42.1 6.2 97 10-117 3-103 (247)
169 1xea_A Oxidoreductase, GFO/IDH 81.2 3.3 0.00011 42.0 7.9 111 9-133 2-117 (323)
170 2w2k_A D-mandelate dehydrogena 81.0 1.4 4.7E-05 45.9 4.9 108 7-132 161-276 (348)
171 1yqg_A Pyrroline-5-carboxylate 80.8 0.82 2.8E-05 44.9 3.0 89 10-116 1-93 (263)
172 1xdw_A NAD+-dependent (R)-2-hy 80.6 1 3.5E-05 46.6 3.8 106 7-134 144-256 (331)
173 2g76_A 3-PGDH, D-3-phosphoglyc 80.4 1.7 5.7E-05 45.2 5.3 109 7-132 163-275 (335)
174 3pid_A UDP-glucose 6-dehydroge 80.4 2 6.9E-05 46.2 6.1 64 62-128 96-169 (432)
175 2ozp_A N-acetyl-gamma-glutamyl 79.9 5.1 0.00017 41.6 8.9 35 78-114 68-102 (345)
176 3d1l_A Putative NADP oxidoredu 79.7 1.2 4.1E-05 43.8 3.8 96 7-116 8-107 (266)
177 3k96_A Glycerol-3-phosphate de 79.7 4 0.00014 42.5 8.0 97 9-117 29-139 (356)
178 2yq5_A D-isomer specific 2-hyd 79.5 1.2 4.2E-05 46.4 3.9 103 8-132 147-256 (343)
179 1gdh_A D-glycerate dehydrogena 79.4 1.6 5.5E-05 44.9 4.8 110 7-132 144-258 (320)
180 1mv8_A GMD, GDP-mannose 6-dehy 79.2 4 0.00014 43.6 8.0 63 63-128 64-140 (436)
181 3hg7_A D-isomer specific 2-hyd 79.1 1.8 6.2E-05 44.7 5.1 110 7-133 138-251 (324)
182 3k5p_A D-3-phosphoglycerate de 78.8 2.4 8.1E-05 45.4 6.0 107 7-132 154-264 (416)
183 3evt_A Phosphoglycerate dehydr 77.1 2.3 7.9E-05 43.9 5.1 112 7-135 135-250 (324)
184 1np3_A Ketol-acid reductoisome 75.8 2.6 8.9E-05 43.5 5.2 92 7-114 14-109 (338)
185 4g2n_A D-isomer specific 2-hyd 75.3 2.7 9.3E-05 43.8 5.1 106 7-132 171-283 (345)
186 3mtj_A Homoserine dehydrogenas 74.4 7 0.00024 42.1 8.2 118 61-197 62-185 (444)
187 2f1k_A Prephenate dehydrogenas 74.2 3.9 0.00013 40.3 5.8 97 10-123 1-102 (279)
188 2gcg_A Glyoxylate reductase/hy 74.1 2.8 9.6E-05 43.1 4.9 107 7-132 153-266 (330)
189 3pff_A ATP-citrate synthase; p 74.1 5.9 0.0002 46.0 7.9 96 166-263 271-385 (829)
190 1j4a_A D-LDH, D-lactate dehydr 74.1 1.7 5.8E-05 45.0 3.2 106 7-133 144-256 (333)
191 2nac_A NAD-dependent formate d 74.0 2.6 8.9E-05 44.7 4.6 111 7-132 189-303 (393)
192 2cuk_A Glycerate dehydrogenase 73.9 2.8 9.7E-05 42.9 4.8 102 7-131 142-247 (311)
193 1bg6_A N-(1-D-carboxylethyl)-L 73.6 12 0.0004 38.1 9.4 94 8-114 3-111 (359)
194 4hy3_A Phosphoglycerate oxidor 73.5 4 0.00014 42.8 5.9 109 7-132 174-286 (365)
195 2dpo_A L-gulonate 3-dehydrogen 73.4 7.6 0.00026 39.8 7.9 52 63-117 75-129 (319)
196 3ulk_A Ketol-acid reductoisome 73.3 1.7 5.8E-05 46.8 3.0 99 5-116 33-136 (491)
197 2o3j_A UDP-glucose 6-dehydroge 71.2 15 0.00051 39.8 10.0 65 63-130 74-154 (481)
198 2j6i_A Formate dehydrogenase; 71.0 3.3 0.00011 43.3 4.6 112 7-132 162-277 (364)
199 3rst_A Signal peptide peptidas 71.0 3.4 0.00012 40.6 4.4 54 209-263 33-92 (240)
200 2ekl_A D-3-phosphoglycerate de 70.9 2.2 7.4E-05 43.8 3.1 106 7-132 140-252 (313)
201 2g5c_A Prephenate dehydrogenas 70.8 6.4 0.00022 38.8 6.5 105 10-127 2-111 (281)
202 4b8w_A GDP-L-fucose synthase; 70.8 21 0.00072 34.7 10.3 89 6-112 3-113 (319)
203 3gg2_A Sugar dehydrogenase, UD 70.7 9.2 0.00032 41.1 8.1 63 63-128 66-138 (450)
204 4ea9_A Perosamine N-acetyltran 70.5 12 0.00042 35.5 8.2 86 10-111 13-103 (220)
205 1wwk_A Phosphoglycerate dehydr 70.4 2.8 9.5E-05 42.8 3.8 107 6-132 139-252 (307)
206 3gg9_A D-3-phosphoglycerate de 70.4 1.6 5.5E-05 45.6 2.0 111 7-133 158-272 (352)
207 2dbq_A Glyoxylate reductase; D 70.2 3 0.0001 43.0 4.0 106 7-132 148-260 (334)
208 1txg_A Glycerol-3-phosphate de 69.6 2.2 7.5E-05 43.2 2.8 47 64-114 58-107 (335)
209 1x0v_A GPD-C, GPDH-C, glycerol 69.4 8.1 0.00028 39.4 7.1 50 62-115 77-128 (354)
210 4huj_A Uncharacterized protein 68.6 6.1 0.00021 37.8 5.6 92 9-115 23-117 (220)
211 3oet_A Erythronate-4-phosphate 68.4 2 6.7E-05 45.5 2.1 106 7-135 117-233 (381)
212 2o4c_A Erythronate-4-phosphate 68.2 1.9 6.4E-05 45.6 1.9 104 7-133 114-228 (380)
213 3jtm_A Formate dehydrogenase, 67.0 3.8 0.00013 42.7 4.0 108 7-132 162-276 (351)
214 2czc_A Glyceraldehyde-3-phosph 65.6 7.8 0.00027 39.9 6.0 46 63-114 67-112 (334)
215 3m2p_A UDP-N-acetylglucosamine 65.3 23 0.00079 34.9 9.4 88 10-112 3-109 (311)
216 2q3e_A UDP-glucose 6-dehydroge 65.1 12 0.00041 40.2 7.6 66 62-130 69-149 (467)
217 1dlj_A UDP-glucose dehydrogena 65.1 6.1 0.00021 41.7 5.2 60 64-126 62-131 (402)
218 3tha_A Tryptophan synthase alp 64.5 6.2 0.00021 39.3 4.7 39 92-132 105-143 (252)
219 1t4b_A Aspartate-semialdehyde 63.8 51 0.0017 34.3 11.9 60 78-139 65-136 (367)
220 2d0i_A Dehydrogenase; structur 63.8 4.5 0.00015 41.7 3.8 109 7-136 144-259 (333)
221 3e48_A Putative nucleoside-dip 63.8 29 0.00099 33.7 9.6 43 67-112 57-106 (289)
222 4e5n_A Thermostable phosphite 63.1 4.9 0.00017 41.5 3.8 110 7-132 143-256 (330)
223 2pi1_A D-lactate dehydrogenase 61.3 5.5 0.00019 41.2 3.9 106 7-133 139-251 (334)
224 4id9_A Short-chain dehydrogena 61.2 48 0.0016 33.1 11.0 91 7-112 17-126 (347)
225 2hjs_A USG-1 protein homolog; 61.2 19 0.00066 37.1 8.0 36 78-115 68-103 (340)
226 3i42_A Response regulator rece 60.7 36 0.0012 28.0 8.5 78 169-257 5-84 (127)
227 2nqt_A N-acetyl-gamma-glutamyl 60.6 22 0.00076 36.9 8.4 104 1-115 1-114 (352)
228 3c24_A Putative oxidoreductase 60.5 8.7 0.0003 38.1 5.1 73 10-100 12-88 (286)
229 2rdm_A Response regulator rece 60.5 45 0.0015 27.5 9.1 80 168-257 6-86 (132)
230 4a7p_A UDP-glucose dehydrogena 60.1 20 0.00069 38.5 8.2 64 63-129 72-146 (446)
231 3dtt_A NADP oxidoreductase; st 59.8 7.9 0.00027 37.6 4.6 79 7-99 17-110 (245)
232 3dhn_A NAD-dependent epimerase 59.7 22 0.00075 33.1 7.6 35 78-112 67-112 (227)
233 1ygy_A PGDH, D-3-phosphoglycer 59.6 6.7 0.00023 43.1 4.4 110 6-132 139-252 (529)
234 2y0c_A BCEC, UDP-glucose dehyd 59.1 12 0.0004 40.6 6.2 63 63-128 72-144 (478)
235 4dpk_A Malonyl-COA/succinyl-CO 58.4 4.8 0.00016 42.1 2.8 35 78-114 79-113 (359)
236 4dpl_A Malonyl-COA/succinyl-CO 58.4 4.8 0.00016 42.1 2.8 35 78-114 79-113 (359)
237 3hdv_A Response regulator; PSI 58.3 49 0.0017 27.6 9.0 115 167-315 7-126 (136)
238 4a29_A Engineered retro-aldol 58.0 10 0.00035 37.7 5.0 95 94-192 118-227 (258)
239 2ew2_A 2-dehydropantoate 2-red 57.5 6.2 0.00021 39.2 3.4 38 78-116 74-113 (316)
240 2rir_A Dipicolinate synthase, 57.0 7.2 0.00025 39.2 3.8 118 6-145 154-277 (300)
241 3cg4_A Response regulator rece 57.0 64 0.0022 27.0 9.6 120 166-320 6-131 (142)
242 1evy_A Glycerol-3-phosphate de 56.8 2.1 7.3E-05 44.2 -0.2 92 11-116 17-129 (366)
243 3ixl_A Amdase, arylmalonate de 56.7 12 0.0004 36.7 5.2 50 92-142 105-154 (240)
244 3h1g_A Chemotaxis protein CHEY 56.4 44 0.0015 27.8 8.3 114 169-315 7-126 (129)
245 3dqp_A Oxidoreductase YLBE; al 55.2 79 0.0027 29.2 10.7 35 78-112 63-106 (219)
246 3eod_A Protein HNR; response r 54.9 65 0.0022 26.5 9.2 81 166-257 6-86 (130)
247 2j48_A Two-component sensor ki 54.7 51 0.0017 26.1 8.2 78 169-257 3-82 (119)
248 1yj8_A Glycerol-3-phosphate de 54.5 18 0.00063 37.3 6.6 51 62-116 90-146 (375)
249 4e7p_A Response regulator; DNA 54.3 52 0.0018 28.1 8.7 114 169-315 22-139 (150)
250 3kjx_A Transcriptional regulat 54.3 1E+02 0.0034 30.6 12.0 112 113-256 36-153 (344)
251 3r6d_A NAD-dependent epimerase 54.2 88 0.003 28.9 10.9 43 67-112 65-108 (221)
252 3hwr_A 2-dehydropantoate 2-red 54.1 15 0.00051 37.2 5.7 99 6-116 16-125 (318)
253 3jte_A Response regulator rece 54.0 66 0.0023 27.0 9.2 114 169-316 5-123 (143)
254 3d4o_A Dipicolinate synthase s 53.9 12 0.00039 37.6 4.7 118 6-145 152-275 (293)
255 1cf2_P Protein (glyceraldehyde 53.4 14 0.00049 38.0 5.5 45 63-113 66-110 (337)
256 3viv_A 441AA long hypothetical 53.3 24 0.00081 34.5 6.7 66 166-257 6-74 (230)
257 3nav_A Tryptophan synthase alp 53.2 31 0.0011 34.5 7.7 72 64-137 83-160 (271)
258 1qkk_A DCTD, C4-dicarboxylate 52.7 67 0.0023 27.5 9.2 78 168-256 4-81 (155)
259 3dr3_A N-acetyl-gamma-glutamyl 52.7 19 0.00066 37.1 6.3 36 78-115 75-110 (337)
260 2qr3_A Two-component system re 52.7 44 0.0015 27.9 7.8 113 168-315 4-125 (140)
261 3c8m_A Homoserine dehydrogenas 52.4 21 0.0007 36.7 6.4 66 65-134 72-144 (331)
262 1nvm_B Acetaldehyde dehydrogen 52.2 8.3 0.00029 39.4 3.4 94 8-111 3-104 (312)
263 3oa2_A WBPB; oxidoreductase, s 51.0 40 0.0014 34.0 8.3 110 169-303 5-131 (318)
264 3f6c_A Positive transcription 50.9 41 0.0014 27.9 7.2 79 169-257 3-81 (134)
265 3hv2_A Response regulator/HD d 50.8 1.2E+02 0.004 25.9 13.7 117 166-317 13-134 (153)
266 3qvo_A NMRA family protein; st 50.6 45 0.0015 31.5 8.3 42 68-112 81-125 (236)
267 2gkg_A Response regulator homo 50.0 83 0.0028 25.4 8.9 82 168-261 6-90 (127)
268 3ic5_A Putative saccharopine d 49.6 35 0.0012 27.9 6.4 47 78-128 69-115 (118)
269 1xyg_A Putative N-acetyl-gamma 49.2 25 0.00087 36.5 6.6 35 78-115 82-116 (359)
270 4e12_A Diketoreductase; oxidor 48.9 14 0.00049 36.6 4.5 52 63-117 73-127 (283)
271 2zay_A Response regulator rece 48.8 43 0.0015 28.4 7.2 117 166-317 7-129 (147)
272 2rjn_A Response regulator rece 48.4 1.1E+02 0.0037 26.1 9.8 115 167-315 7-125 (154)
273 3kqf_A Enoyl-COA hydratase/iso 48.2 25 0.00086 34.7 6.1 54 210-264 41-116 (265)
274 1hdo_A Biliverdin IX beta redu 47.8 44 0.0015 30.2 7.4 43 67-112 59-111 (206)
275 3grc_A Sensor protein, kinase; 47.7 90 0.0031 26.0 9.0 79 167-256 6-86 (140)
276 3vps_A TUNA, NAD-dependent epi 47.3 1.2E+02 0.004 29.5 11.0 20 93-112 100-119 (321)
277 1rkx_A CDP-glucose-4,6-dehydra 47.0 33 0.0011 34.5 6.9 103 1-112 1-132 (357)
278 3bf0_A Protease 4; bacterial, 46.7 9.5 0.00032 42.6 3.0 47 210-257 75-127 (593)
279 3cnb_A DNA-binding response re 46.6 1.1E+02 0.0037 25.4 9.3 115 167-315 8-129 (143)
280 2ph5_A Homospermidine synthase 46.6 27 0.00094 37.8 6.4 121 7-136 10-156 (480)
281 3i83_A 2-dehydropantoate 2-red 46.4 13 0.00043 37.7 3.7 49 63-115 59-109 (320)
282 1ebf_A Homoserine dehydrogenas 46.2 16 0.00055 38.0 4.4 114 9-134 4-140 (358)
283 3kht_A Response regulator; PSI 45.7 1.3E+02 0.0045 25.1 14.6 123 167-322 5-134 (144)
284 1f0y_A HCDH, L-3-hydroxyacyl-C 45.6 23 0.00079 35.3 5.5 52 63-117 88-142 (302)
285 2py6_A Methyltransferase FKBM; 45.6 6.4 0.00022 41.7 1.3 77 11-105 54-135 (409)
286 3qmj_A Enoyl-COA hydratase, EC 45.4 37 0.0013 33.2 6.8 53 210-263 38-112 (256)
287 3pwk_A Aspartate-semialdehyde 45.3 31 0.0011 36.0 6.5 91 10-114 3-98 (366)
288 2b4a_A BH3024; flavodoxin-like 44.9 74 0.0025 26.5 8.0 82 166-257 14-95 (138)
289 2pk3_A GDP-6-deoxy-D-LYXO-4-he 44.8 64 0.0022 31.6 8.6 96 5-112 7-126 (321)
290 3hn2_A 2-dehydropantoate 2-red 44.8 76 0.0026 31.7 9.2 92 10-115 3-107 (312)
291 1zej_A HBD-9, 3-hydroxyacyl-CO 44.5 5.4 0.00018 40.5 0.5 93 9-117 12-113 (293)
292 3cu5_A Two component transcrip 44.4 61 0.0021 27.5 7.4 81 169-257 4-84 (141)
293 2vns_A Metalloreductase steap3 44.4 9.5 0.00033 36.3 2.2 90 9-117 28-121 (215)
294 2yjz_A Metalloreductase steap4 50.1 4.8 0.00016 38.3 0.0 91 7-116 17-110 (201)
295 3bf0_A Protease 4; bacterial, 43.8 14 0.00046 41.3 3.6 54 209-263 326-384 (593)
296 3ew7_A LMO0794 protein; Q8Y8U8 43.6 83 0.0028 28.7 8.7 35 78-112 61-103 (221)
297 1ks9_A KPA reductase;, 2-dehyd 43.5 48 0.0016 32.1 7.3 37 78-115 63-101 (291)
298 3tsm_A IGPS, indole-3-glycerol 43.1 36 0.0012 34.0 6.3 92 97-191 136-242 (272)
299 3dfu_A Uncharacterized protein 42.5 50 0.0017 32.2 7.1 85 10-135 7-95 (232)
300 2qsj_A DNA-binding response re 42.4 43 0.0015 28.7 6.1 80 169-256 5-84 (154)
301 3p5m_A Enoyl-COA hydratase/iso 42.3 29 0.001 34.0 5.5 54 210-264 38-106 (255)
302 3kto_A Response regulator rece 42.1 50 0.0017 27.7 6.4 115 167-316 6-126 (136)
303 3hzh_A Chemotaxis response reg 41.9 37 0.0013 29.5 5.6 81 168-257 37-118 (157)
304 1p9l_A Dihydrodipicolinate red 41.8 69 0.0024 31.3 8.1 78 169-262 2-81 (245)
305 3kcn_A Adenylate cyclase homol 41.2 1.2E+02 0.0039 25.8 8.8 114 168-316 5-123 (151)
306 2qvg_A Two component response 40.8 1.4E+02 0.0046 24.8 9.1 83 167-257 7-96 (143)
307 3hsk_A Aspartate-semialdehyde 40.6 45 0.0015 35.0 6.9 36 78-115 93-128 (381)
308 3eul_A Possible nitrate/nitrit 40.5 90 0.0031 26.6 8.0 117 166-315 14-134 (152)
309 3a10_A Response regulator; pho 40.0 1.1E+02 0.0039 24.3 8.2 78 169-257 3-80 (116)
310 3o9z_A Lipopolysaccaride biosy 40.0 89 0.003 31.3 8.8 108 169-301 5-128 (312)
311 2qxy_A Response regulator; reg 40.0 1.2E+02 0.0041 25.2 8.6 112 168-315 5-120 (142)
312 1i4n_A Indole-3-glycerol phosp 39.7 41 0.0014 33.2 6.1 47 99-145 119-181 (251)
313 3cg0_A Response regulator rece 39.5 54 0.0018 27.3 6.2 115 167-316 9-128 (140)
314 2axq_A Saccharopine dehydrogen 39.2 26 0.0009 37.7 4.9 60 68-134 81-140 (467)
315 2raf_A Putative dinucleotide-b 39.2 46 0.0016 31.3 6.1 75 7-115 17-94 (209)
316 1yg6_A ATP-dependent CLP prote 38.7 26 0.00089 32.9 4.3 52 210-263 43-97 (193)
317 3cz5_A Two-component response 38.4 58 0.002 27.9 6.3 81 168-257 6-86 (153)
318 1k68_A Phytochrome response re 38.3 1.6E+02 0.0055 24.0 14.8 121 168-320 3-135 (140)
319 3lua_A Response regulator rece 38.1 91 0.0031 26.0 7.5 114 168-315 5-126 (140)
320 3qy9_A DHPR, dihydrodipicolina 38.0 42 0.0014 32.9 5.8 116 169-314 5-120 (243)
321 2ejw_A HDH, homoserine dehydro 37.8 22 0.00075 36.6 3.9 60 64-129 56-116 (332)
322 1jay_A Coenzyme F420H2:NADP+ o 37.7 32 0.0011 32.0 4.7 46 66-115 55-101 (212)
323 4ina_A Saccharopine dehydrogen 37.4 23 0.00079 37.2 4.0 69 66-138 65-142 (405)
324 2qv0_A Protein MRKE; structura 37.4 1E+02 0.0034 25.8 7.7 121 167-322 9-133 (143)
325 2hk9_A Shikimate dehydrogenase 37.3 6.8 0.00023 39.0 -0.1 107 7-134 127-239 (275)
326 5nul_A Flavodoxin; electron tr 37.3 75 0.0026 27.2 6.8 59 78-136 45-113 (138)
327 2qyt_A 2-dehydropantoate 2-red 37.2 12 0.00041 37.3 1.7 37 78-116 83-122 (317)
328 3mm4_A Histidine kinase homolo 37.1 1.2E+02 0.0041 27.8 8.7 83 166-257 60-158 (206)
329 1ff9_A Saccharopine reductase; 37.0 53 0.0018 35.1 6.9 60 68-134 61-120 (450)
330 3hdg_A Uncharacterized protein 36.7 1.2E+02 0.0041 25.0 8.0 117 168-319 8-128 (137)
331 3k2g_A Resiniferatoxin-binding 36.0 72 0.0025 33.1 7.5 46 94-142 90-136 (364)
332 4egb_A DTDP-glucose 4,6-dehydr 35.8 1E+02 0.0035 30.5 8.6 46 66-112 87-149 (346)
333 2g1u_A Hypothetical protein TM 35.7 76 0.0026 27.9 6.8 37 78-114 84-121 (155)
334 3b2n_A Uncharacterized protein 35.5 1.1E+02 0.0037 25.3 7.5 114 169-315 5-122 (133)
335 4dad_A Putative pilus assembly 35.5 83 0.0028 26.5 6.8 116 166-315 19-140 (146)
336 3ruf_A WBGU; rossmann fold, UD 35.2 65 0.0022 32.1 6.9 25 7-32 23-51 (351)
337 3ing_A Homoserine dehydrogenas 35.1 35 0.0012 34.9 4.9 147 68-247 73-225 (325)
338 3gkb_A Putative enoyl-COA hydr 35.0 55 0.0019 32.7 6.3 22 210-231 40-61 (287)
339 2r00_A Aspartate-semialdehyde 35.0 60 0.0021 33.2 6.7 35 78-114 65-99 (336)
340 3g64_A Putative enoyl-COA hydr 34.9 44 0.0015 33.2 5.5 54 210-264 49-127 (279)
341 1ys4_A Aspartate-semialdehyde 34.9 55 0.0019 33.7 6.4 35 78-114 83-117 (354)
342 3ilh_A Two component response 34.7 1.8E+02 0.0061 24.0 8.9 81 168-256 10-98 (146)
343 3i6i_A Putative leucoanthocyan 34.6 1.3E+02 0.0045 29.9 9.2 43 66-109 72-117 (346)
344 3e8x_A Putative NAD-dependent 34.5 59 0.002 30.5 6.1 91 6-112 18-131 (236)
345 3h5t_A Transcriptional regulat 34.4 2.6E+02 0.009 27.7 11.5 117 112-256 34-157 (366)
346 3fdu_A Putative enoyl-COA hydr 34.2 68 0.0023 31.6 6.7 16 249-264 98-113 (266)
347 3h5i_A Response regulator/sens 34.1 2E+02 0.0069 23.8 11.0 118 168-320 6-128 (140)
348 3k4h_A Putative transcriptiona 33.9 2.4E+02 0.0082 26.7 10.7 173 66-252 32-219 (292)
349 1mio_B Nitrogenase molybdenum 33.9 1.2E+02 0.0041 32.3 9.1 150 94-256 87-264 (458)
350 3dbi_A Sugar-binding transcrip 33.8 1.2E+02 0.0041 29.9 8.7 114 112-256 28-149 (338)
351 1y7o_A ATP-dependent CLP prote 33.8 34 0.0012 32.9 4.3 51 211-263 63-116 (218)
352 1hzd_A AUH, AU-binding protein 33.6 33 0.0011 33.9 4.3 53 210-263 44-118 (272)
353 3ghy_A Ketopantoate reductase 33.4 21 0.00074 36.2 2.9 91 9-114 3-107 (335)
354 3gow_A PAAG, probable enoyl-CO 33.2 65 0.0022 31.4 6.3 54 210-264 32-105 (254)
355 2lnd_A De novo designed protei 33.1 80 0.0027 25.6 5.5 57 240-316 40-101 (112)
356 3t89_A 1,4-dihydroxy-2-naphtho 33.0 76 0.0026 31.7 6.9 52 210-264 60-137 (289)
357 1tmy_A CHEY protein, TMY; chem 33.0 92 0.0031 25.0 6.4 79 169-257 4-82 (120)
358 3tz6_A Aspartate-semialdehyde 32.8 45 0.0015 34.5 5.2 92 11-114 3-97 (344)
359 4do7_A Amidohydrolase 2; enzym 32.7 49 0.0017 32.9 5.5 45 86-130 30-74 (303)
360 3myb_A Enoyl-COA hydratase; ss 32.6 46 0.0016 33.3 5.2 54 210-264 58-133 (286)
361 2x4g_A Nucleoside-diphosphate- 32.5 75 0.0026 31.4 6.8 22 10-32 14-39 (342)
362 3st7_A Capsular polysaccharide 32.4 73 0.0025 32.2 6.9 42 92-133 73-125 (369)
363 3pe8_A Enoyl-COA hydratase; em 32.4 34 0.0012 33.7 4.1 54 210-264 41-106 (256)
364 3oh8_A Nucleoside-diphosphate 32.2 1.1E+02 0.0036 33.0 8.4 23 9-32 147-173 (516)
365 3oc7_A Enoyl-COA hydratase; se 32.2 53 0.0018 32.3 5.5 54 210-264 43-122 (267)
366 3i47_A Enoyl COA hydratase/iso 31.8 54 0.0019 32.3 5.5 54 210-264 36-113 (268)
367 4di1_A Enoyl-COA hydratase ECH 31.7 54 0.0019 32.6 5.5 54 210-264 55-129 (277)
368 1u8f_O GAPDH, glyceraldehyde-3 31.7 55 0.0019 33.6 5.7 44 68-113 81-124 (335)
369 2jba_A Phosphate regulon trans 31.6 1.6E+02 0.0056 23.6 7.9 79 169-258 4-84 (127)
370 1eq2_A ADP-L-glycero-D-mannohe 31.5 1.8E+02 0.0063 27.9 9.5 33 79-112 69-116 (310)
371 3egc_A Putative ribose operon 31.5 1.6E+02 0.0054 28.1 8.9 171 65-250 26-211 (291)
372 4eml_A Naphthoate synthase; 1, 31.5 73 0.0025 31.5 6.4 52 210-264 42-123 (275)
373 3t8b_A 1,4-dihydroxy-2-naphtho 31.4 70 0.0024 32.8 6.4 22 210-231 89-110 (334)
374 4ggi_A UDP-2,3-diacylglucosami 31.4 27 0.00094 35.0 3.3 43 93-135 234-276 (283)
375 1yio_A Response regulatory pro 31.4 2.7E+02 0.0092 24.9 10.1 80 167-257 4-83 (208)
376 2ppy_A Enoyl-COA hydratase; be 31.4 60 0.002 31.9 5.7 54 210-264 40-115 (265)
377 1dbw_A Transcriptional regulat 31.2 2.1E+02 0.0071 23.1 10.9 78 168-256 4-81 (126)
378 3rrv_A Enoyl-COA hydratase/iso 31.1 63 0.0022 32.0 5.9 54 210-264 60-136 (276)
379 3swx_A Probable enoyl-COA hydr 31.1 71 0.0024 31.3 6.2 54 210-264 41-116 (265)
380 2a7k_A CARB; crotonase, antibi 31.1 42 0.0014 32.6 4.5 53 211-264 33-108 (250)
381 1b5p_A Protein (aspartate amin 30.9 1.4E+02 0.0048 30.0 8.8 72 64-137 123-204 (385)
382 3rhg_A Putative phophotriester 30.9 49 0.0017 34.4 5.2 38 96-134 81-120 (365)
383 3vnd_A TSA, tryptophan synthas 30.8 2.1E+02 0.0071 28.3 9.6 38 93-132 113-150 (267)
384 1pii_A N-(5'phosphoribosyl)ant 30.8 65 0.0022 34.6 6.2 137 95-246 123-274 (452)
385 3c85_A Putative glutathione-re 30.7 1.2E+02 0.0041 27.2 7.4 35 78-112 105-140 (183)
386 2cby_A ATP-dependent CLP prote 30.6 31 0.0011 32.9 3.4 76 180-263 17-98 (208)
387 1rpn_A GDP-mannose 4,6-dehydra 30.5 1.5E+02 0.0051 29.1 8.7 97 8-112 12-138 (335)
388 1vl0_A DTDP-4-dehydrorhamnose 30.2 56 0.0019 31.6 5.3 24 9-32 11-38 (292)
389 3snk_A Response regulator CHEY 30.2 79 0.0027 26.3 5.7 80 167-257 14-94 (135)
390 2jl1_A Triphenylmethane reduct 30.0 1.3E+02 0.0044 28.8 7.9 44 67-113 58-108 (287)
391 2ep5_A 350AA long hypothetical 29.9 54 0.0019 33.7 5.3 35 78-114 77-111 (350)
392 3sll_A Probable enoyl-COA hydr 29.8 67 0.0023 32.0 5.9 54 210-264 56-137 (290)
393 3n75_A LDC, lysine decarboxyla 29.8 57 0.002 37.1 5.9 76 173-261 12-87 (715)
394 3gpi_A NAD-dependent epimerase 29.6 1.1E+02 0.0039 29.3 7.4 89 9-112 3-109 (286)
395 2ekc_A AQ_1548, tryptophan syn 29.3 2.1E+02 0.0072 27.8 9.4 39 93-133 112-150 (262)
396 4hdt_A 3-hydroxyisobutyryl-COA 29.1 89 0.003 32.2 6.8 54 210-264 41-119 (353)
397 3dbi_A Sugar-binding transcrip 29.1 4E+02 0.014 26.0 11.7 173 67-252 83-269 (338)
398 1xgk_A Nitrogen metabolite rep 28.5 1.3E+02 0.0044 30.4 7.9 43 68-113 66-114 (352)
399 2ej5_A Enoyl-COA hydratase sub 28.4 1E+02 0.0035 30.0 6.8 54 210-264 35-108 (257)
400 3qk8_A Enoyl-COA hydratase ECH 28.3 67 0.0023 31.7 5.5 54 210-264 45-121 (272)
401 1e6u_A GDP-fucose synthetase; 28.1 80 0.0027 30.9 6.1 19 94-112 89-107 (321)
402 3crn_A Response regulator rece 28.0 2E+02 0.0069 23.5 8.0 112 169-315 5-120 (132)
403 2pln_A HP1043, response regula 27.8 2.5E+02 0.0086 23.0 8.8 76 165-256 16-92 (137)
404 3l3s_A Enoyl-COA hydratase/iso 27.7 56 0.0019 32.1 4.7 54 210-264 38-118 (263)
405 3op7_A Aminotransferase class 27.7 1.4E+02 0.0049 29.6 8.1 72 64-137 113-194 (375)
406 3ehe_A UDP-glucose 4-epimerase 27.7 2E+02 0.007 27.8 9.1 43 67-112 55-114 (313)
407 3lao_A Enoyl-COA hydratase/iso 27.6 18 0.00063 35.5 1.2 53 210-263 44-118 (258)
408 4d9a_A 2-pyrone-4,6-dicarbaxyl 27.3 3.7E+02 0.013 26.5 11.0 134 86-261 50-184 (303)
409 2bka_A CC3, TAT-interacting pr 27.3 1.5E+02 0.0052 27.4 7.7 44 66-112 75-132 (242)
410 2pl1_A Transcriptional regulat 27.2 2.3E+02 0.008 22.4 9.2 76 170-256 3-78 (121)
411 3sc6_A DTDP-4-dehydrorhamnose 27.2 48 0.0017 32.0 4.2 21 12-32 7-31 (287)
412 1vkn_A N-acetyl-gamma-glutamyl 27.1 1.8E+02 0.0063 29.9 8.7 110 11-138 15-157 (351)
413 2i99_A MU-crystallin homolog; 27.1 10 0.00034 38.5 -0.9 109 8-135 134-248 (312)
414 3vsj_A 2-amino-5-chlorophenol 26.9 4.4E+02 0.015 25.5 12.8 140 175-322 88-234 (271)
415 2ayx_A Sensor kinase protein R 26.8 2.3E+02 0.0079 26.9 9.1 116 167-317 129-248 (254)
416 1jbe_A Chemotaxis protein CHEY 26.7 2.5E+02 0.0085 22.6 9.0 114 169-316 6-125 (128)
417 3f6p_A Transcriptional regulat 26.7 2.5E+02 0.0085 22.5 9.7 77 169-257 4-80 (120)
418 3lke_A Enoyl-COA hydratase; ny 26.7 74 0.0025 31.2 5.5 54 210-264 36-115 (263)
419 3qk7_A Transcriptional regulat 26.5 2.8E+02 0.0096 26.5 9.8 172 66-252 29-214 (294)
420 2c20_A UDP-glucose 4-epimerase 26.5 2.3E+02 0.0079 27.5 9.3 19 94-112 100-118 (330)
421 2hsg_A Glucose-resistance amyl 26.2 1.6E+02 0.0056 28.8 8.1 113 112-256 27-145 (332)
422 1uiy_A Enoyl-COA hydratase; ly 26.2 87 0.003 30.4 5.8 53 211-264 32-108 (253)
423 1gd9_A Aspartate aminotransfer 26.2 1.5E+02 0.0051 29.7 7.9 69 64-134 119-197 (389)
424 2pzm_A Putative nucleotide sug 26.2 1.2E+02 0.0042 29.9 7.1 99 5-112 16-136 (330)
425 3g0t_A Putative aminotransfera 26.1 1.1E+02 0.0039 31.1 7.1 75 64-139 141-224 (437)
426 1nzy_A Dehalogenase, 4-chlorob 26.1 66 0.0022 31.6 5.0 54 210-264 35-114 (269)
427 3pea_A Enoyl-COA hydratase/iso 26.1 89 0.003 30.6 5.9 54 210-264 37-112 (261)
428 3t8y_A CHEB, chemotaxis respon 26.0 1.6E+02 0.0055 25.5 7.2 81 167-257 25-105 (164)
429 3nhm_A Response regulator; pro 25.9 2.6E+02 0.009 22.6 8.9 112 168-316 5-122 (133)
430 1szo_A 6-oxocamphor hydrolase; 25.9 70 0.0024 31.3 5.1 54 210-264 48-122 (257)
431 1srr_A SPO0F, sporulation resp 25.8 2.6E+02 0.0087 22.4 8.6 78 168-256 4-81 (124)
432 4fzw_A 2,3-dehydroadipyl-COA h 25.8 1.2E+02 0.004 29.7 6.7 53 210-263 37-108 (258)
433 3fdb_A Beta C-S lyase, putativ 25.7 1.7E+02 0.0057 29.1 8.1 70 64-135 113-188 (377)
434 4fgw_A Glycerol-3-phosphate de 25.6 47 0.0016 35.0 3.9 49 62-114 104-154 (391)
435 1mvo_A PHOP response regulator 25.6 2.7E+02 0.0093 22.6 9.4 79 168-257 4-82 (136)
436 3e5r_O PP38, glyceraldehyde-3- 25.5 1.2E+02 0.0041 31.0 7.0 34 78-112 93-126 (337)
437 3ks9_A Mglur1, metabotropic gl 25.4 5.3E+02 0.018 27.1 12.5 132 107-248 129-280 (496)
438 3e3m_A Transcriptional regulat 25.2 2E+02 0.0069 28.5 8.6 112 113-256 38-155 (355)
439 3hrx_A Probable enoyl-COA hydr 25.2 1.1E+02 0.0037 29.7 6.3 53 210-263 32-104 (254)
440 3rqi_A Response regulator prot 25.1 1.7E+02 0.0057 26.0 7.3 79 167-256 7-85 (184)
441 3g79_A NDP-N-acetyl-D-galactos 25.0 1.2E+02 0.004 32.8 7.0 46 78-123 101-158 (478)
442 3dzz_A Putative pyridoxal 5'-p 24.9 1.2E+02 0.004 30.3 6.8 72 64-138 117-201 (391)
443 1k66_A Phytochrome response re 24.8 2.9E+02 0.0099 22.7 14.1 123 166-320 5-142 (149)
444 3o74_A Fructose transport syst 24.7 1.6E+02 0.0054 27.6 7.4 171 65-249 20-204 (272)
445 2vx2_A Enoyl-COA hydratase dom 24.6 92 0.0032 31.0 5.8 53 210-263 65-139 (287)
446 1ef8_A Methylmalonyl COA decar 24.6 56 0.0019 32.0 4.1 16 249-264 95-110 (261)
447 3h5o_A Transcriptional regulat 24.6 1.7E+02 0.0057 28.9 7.8 112 113-256 30-147 (339)
448 2ioj_A Hypothetical protein AF 24.5 64 0.0022 28.3 4.1 51 83-137 55-105 (139)
449 1ys7_A Transcriptional regulat 24.4 3.7E+02 0.013 24.4 9.8 80 168-258 8-87 (233)
450 3rsi_A Putative enoyl-COA hydr 24.4 63 0.0022 31.7 4.5 54 210-264 41-116 (265)
451 2j5g_A ALR4455 protein; enzyme 24.3 69 0.0023 31.5 4.7 54 210-264 56-131 (263)
452 3eqz_A Response regulator; str 24.3 1.4E+02 0.0048 24.3 6.1 76 169-256 5-80 (135)
453 4fzw_C 1,2-epoxyphenylacetyl-C 24.2 83 0.0028 31.1 5.3 54 210-264 47-125 (274)
454 1jx6_A LUXP protein; protein-l 24.0 3.5E+02 0.012 26.3 10.1 111 115-256 15-134 (342)
455 3enk_A UDP-glucose 4-epimerase 24.0 2.5E+02 0.0086 27.4 9.0 47 65-112 66-129 (341)
456 3db2_A Putative NADPH-dependen 24.0 3.4E+02 0.012 27.1 10.2 69 209-304 57-125 (354)
457 2e4u_A Metabotropic glutamate 24.0 4.7E+02 0.016 27.9 11.8 139 107-254 118-274 (555)
458 3lte_A Response regulator; str 23.8 2.9E+02 0.0098 22.3 10.5 114 167-315 6-124 (132)
459 3gt7_A Sensor protein; structu 23.8 3.3E+02 0.011 23.0 15.0 116 166-316 6-127 (154)
460 3tcm_A Alanine aminotransferas 23.8 1.7E+02 0.0058 31.1 8.1 75 63-138 189-278 (500)
461 3cfy_A Putative LUXO repressor 23.6 2E+02 0.0068 23.9 7.1 113 169-316 6-122 (137)
462 3o38_A Short chain dehydrogena 23.6 2.4E+02 0.0082 26.7 8.5 88 166-261 20-112 (266)
463 3ijp_A DHPR, dihydrodipicolina 23.5 81 0.0028 31.7 5.1 117 168-315 22-157 (288)
464 2c5a_A GDP-mannose-3', 5'-epim 23.5 3.1E+02 0.011 27.5 9.8 19 94-112 127-145 (379)
465 1dci_A Dienoyl-COA isomerase; 23.3 1.1E+02 0.0038 30.0 6.0 22 210-231 36-57 (275)
466 3t3w_A Enoyl-COA hydratase; ss 23.2 70 0.0024 31.7 4.5 54 210-264 52-131 (279)
467 2zcu_A Uncharacterized oxidore 23.1 1.4E+02 0.0046 28.5 6.6 43 67-112 57-104 (286)
468 1jr2_A Uroporphyrinogen-III sy 22.9 2.2E+02 0.0076 27.7 8.3 74 167-246 157-231 (286)
469 2wm3_A NMRA-like family domain 22.8 1.5E+02 0.005 28.7 6.8 43 67-112 64-115 (299)
470 2a9o_A Response regulator; ess 22.8 2.3E+02 0.0078 22.4 7.1 77 169-257 3-79 (120)
471 1sg4_A 3,2-trans-enoyl-COA iso 22.6 67 0.0023 31.4 4.2 54 210-264 36-111 (260)
472 3moy_A Probable enoyl-COA hydr 22.6 80 0.0027 31.0 4.8 53 210-263 42-113 (263)
473 2uzf_A Naphthoate synthase; ly 22.4 1.3E+02 0.0045 29.5 6.4 24 239-264 98-121 (273)
474 3md9_A Hemin-binding periplasm 22.4 4.8E+02 0.017 24.4 11.3 88 8-109 1-88 (255)
475 1rm4_O Glyceraldehyde 3-phosph 22.4 2.3E+02 0.008 29.0 8.4 36 78-115 91-126 (337)
476 2d5c_A AROE, shikimate 5-dehyd 22.4 54 0.0019 31.9 3.5 103 11-134 118-226 (263)
477 2gn4_A FLAA1 protein, UDP-GLCN 22.3 1.7E+02 0.006 29.2 7.5 19 94-112 124-142 (344)
478 3kb6_A D-lactate dehydrogenase 22.3 1E+02 0.0035 31.5 5.6 106 8-134 140-252 (334)
479 2q1s_A Putative nucleotide sug 22.1 5.1E+02 0.017 25.8 11.1 20 93-112 131-151 (377)
480 3h0u_A Putative enoyl-COA hydr 22.1 1.5E+02 0.0051 29.5 6.7 54 210-264 39-117 (289)
481 3piu_A 1-aminocyclopropane-1-c 22.0 3.6E+02 0.012 27.4 10.0 21 114-134 208-228 (435)
482 2dgd_A 223AA long hypothetical 21.9 96 0.0033 29.3 5.1 49 93-142 97-145 (223)
483 1qpz_A PURA, protein (purine n 21.8 3.1E+02 0.011 26.8 9.2 114 112-256 25-144 (340)
484 1dp4_A Atrial natriuretic pept 21.7 6.2E+02 0.021 25.4 13.2 144 92-248 66-230 (435)
485 2iks_A DNA-binding transcripti 21.6 3.2E+02 0.011 25.9 9.1 173 66-252 39-224 (293)
486 2jk1_A HUPR, hydrogenase trans 21.6 3.4E+02 0.012 22.3 10.2 112 169-315 3-118 (139)
487 3trr_A Probable enoyl-COA hydr 21.5 88 0.003 30.5 4.8 54 210-264 39-107 (256)
488 3c3k_A Alanine racemase; struc 21.4 5.1E+02 0.018 24.3 10.6 170 65-252 26-211 (285)
489 2p5y_A UDP-glucose 4-epimerase 21.4 3.3E+02 0.011 26.2 9.2 20 94-113 99-118 (311)
490 4h1h_A LMO1638 protein; MCCF-l 21.3 1.3E+02 0.0045 30.5 6.2 89 163-256 7-113 (327)
491 1kgs_A DRRD, DNA binding respo 21.2 4.5E+02 0.015 23.6 9.9 78 169-257 4-81 (225)
492 3v2h_A D-beta-hydroxybutyrate 21.1 5.5E+02 0.019 24.6 11.1 89 166-261 23-115 (281)
493 1mj3_A Enoyl-COA hydratase, mi 21.1 33 0.0011 33.7 1.5 53 210-263 39-110 (260)
494 2pbp_A Enoyl-COA hydratase sub 21.0 1.3E+02 0.0044 29.3 5.9 54 210-264 37-109 (258)
495 3gl9_A Response regulator; bet 20.9 3.3E+02 0.011 21.9 8.6 77 169-256 4-82 (122)
496 1y81_A Conserved hypothetical 20.8 1.5E+02 0.0051 26.0 5.8 29 165-193 12-43 (138)
497 3kux_A Putative oxidoreductase 20.8 3.4E+02 0.012 27.2 9.3 67 209-302 58-124 (352)
498 3njd_A Enoyl-COA hydratase; ss 20.7 90 0.0031 31.8 4.8 22 210-231 67-88 (333)
499 1p6q_A CHEY2; chemotaxis, sign 20.6 2.4E+02 0.0081 22.8 6.8 79 168-256 7-87 (129)
500 3h2s_A Putative NADH-flavin re 20.6 1.5E+02 0.0052 27.0 6.1 21 11-32 2-26 (224)
No 1
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=100.00 E-value=7.2e-71 Score=578.60 Aligned_cols=327 Identities=52% Similarity=0.896 Sum_probs=282.1
Q ss_pred CCCCCCCcEEEEEcCCchHHHHHhhCcccCCC-CCCcEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCccE
Q 007327 4 GQLFSKTTQALFYNYKQLPIQRMLDFDFLCGR-ETPSVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADV 81 (608)
Q Consensus 4 ~~l~~p~s~avv~g~~~~~~~~l~~~~~~~~~-g~~~v~~v~~p~~~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDl 81 (608)
..||+|++++||+|++||.+++|++++|.|.| ++++|++|+ |++++ .++.++|.+..|+|||+|++|++++.|++|+
T Consensus 4 ~~l~~~~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~-P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~Dl 82 (334)
T 3mwd_B 4 TTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVY-PFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDV 82 (334)
T ss_dssp SCCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEEC-TTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCCE
T ss_pred ccccCCCCeEEEECCchHHHHHHHHhcccccCCCceEEEEEc-CCCCCccceEeccCccCCceeeCCHHHHhhcCCCCcE
Confidence 58999999999999999999999999985544 377999998 97764 2344577777899999999999876545899
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCccccccc
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIH 161 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p 161 (608)
+||+||+.++.++++|+|.++|+|.+||||+||+|.++++|+++||++|+||+||||+|++||+.+++|....+|.+.+|
T Consensus 83 aVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliGPNc~Gii~p~~~~ig~~~~~~~a~~~ 162 (334)
T 3mwd_B 83 LINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA 162 (334)
T ss_dssp EEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHHHHH
T ss_pred EEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEccCCccccCcchhhccccccccccccc
Confidence 99999999877899999998999999999999999999999999999999999999999999986566533455655566
Q ss_pred ccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHH
Q 007327 162 CKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241 (608)
Q Consensus 162 ~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~ 241 (608)
...++||+||||||||++++++++|+.++|+|||++||+||+.+.|+|+.|+|+||.+||+||+|+||+|++....++|+
T Consensus 163 ~~~~~~G~vgivSqSG~l~~~i~~~~~~~g~G~S~~VsiGn~~~~d~~~~D~l~~~~~Dp~T~~I~l~gEi~g~~e~~~~ 242 (334)
T 3mwd_B 163 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIGGTEEYKIC 242 (334)
T ss_dssp TTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHH
T ss_pred ccCCCCCCEEEEeCchHHHHHHHHHHHhcCCCeEEEEECCCCccCCCCHHHHHHHHhcCCCCCEEEEEEecCChHHHHHH
Confidence 66779999999999999999999999999999999999999944499999999999999999999999665555559999
Q ss_pred HHHHhCCCCCCEEEEEeCCCcc--CcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHh
Q 007327 242 EALKQGKVNKPVVAWVSGTCAR--LFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLVE 319 (608)
Q Consensus 242 ~~~r~a~~~KPVvvlk~Grs~~--g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~~~ 319 (608)
+++|+.+++||||++|+|||++ | +++++|||||++|++.+++++|+++|||+|++++++++||+++++.++++|..
T Consensus 243 ~~~r~~~~~KPVV~~kaGrs~~~~g--~~aa~sHtGalag~~~~~a~~~~aa~~~aGv~~v~~~~el~~~~~~~~~~l~~ 320 (334)
T 3mwd_B 243 RGIKEGRLTKPIVCWCIGTCATMFS--SEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLVA 320 (334)
T ss_dssp HHHHTTSCCSCEEEEEECTTCC------------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCEEEEEcCCCccccc--ccccccchhhhccCCCccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHHH
Confidence 9999988999999999999998 7 89999999999999988999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCC
Q 007327 320 EGKIPPVKEVTPPQ 333 (608)
Q Consensus 320 ~G~~~~~~~~~~p~ 333 (608)
+|.+.|.++.++|+
T Consensus 321 ~~~~~~~~~~~~~~ 334 (334)
T 3mwd_B 321 NGVIVPAQEVPPPT 334 (334)
T ss_dssp TTSCCCCCCCCCCC
T ss_pred CCcEeeCCCCCCCC
Confidence 99999999988874
No 2
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.6e-65 Score=583.12 Aligned_cols=322 Identities=50% Similarity=0.838 Sum_probs=273.1
Q ss_pred CCCCCCcEEEEEcCCchHHHHHhhCcccCCCC-CCcEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 5 QLFSKTTQALFYNYKQLPIQRMLDFDFLCGRE-TPSVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 5 ~l~~p~s~avv~g~~~~~~~~l~~~~~~~~~g-~~~v~~v~~p~~~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
+||++++++||+|++||++++|++|+|.|+|. +++|++|+ |+++| .++++||.+..|+|||+||+|+++.+|++|++
T Consensus 491 ~l~~~~trviV~G~tg~~~~~ml~~~~~~~~~~~~vVa~V~-P~~~g~~~~~~~G~~~~Gvp~y~sv~ea~~~~p~~Dla 569 (829)
T 3pff_A 491 TLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVY-PFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDVL 569 (829)
T ss_dssp CCCCTTCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEEC-TTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCCEE
T ss_pred eeecCCCeEEEECCcHHHHHHHHHhcccccCCCCcEEEEEc-CCCCCccceEEecCCcCCcccCCcHHHHhhccCCCcEE
Confidence 78999999999999999999999999977665 77999998 98875 66778898999999999999998765458999
Q ss_pred EEeccChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCccccccc
Q 007327 83 INFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIH 161 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p 161 (608)
||+||+.+ +.+++++|.+ +|||.+||||+||+|.++++|+++||++|+||+||||+|++||+.+++|.+.++|.+.+|
T Consensus 570 VI~vP~~~-v~~av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~rliGPNc~Gii~p~~~~ig~~~g~lna~~~ 648 (829)
T 3pff_A 570 INFASLRS-AYDSTMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILA 648 (829)
T ss_dssp EECCCTTT-HHHHHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCCEEETTTEECTTTTCSHHHHHH
T ss_pred EEeCCHHH-HHHHHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCEEEcCCCcccCccccccccccccccccccc
Confidence 99999987 6778888888 999999999999999999999999999999999999999999987556433334544556
Q ss_pred ccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHH
Q 007327 162 CKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLV 241 (608)
Q Consensus 162 ~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~ 241 (608)
...++||+||+|||||++++++++|+.++|+|||++||+||+.+.|+++.|+|+||.+||+|++|++|+|+ ++++|+
T Consensus 649 ~~~~~~G~VgiVSqSGal~~~i~~~~~~~g~G~S~~VsiGnd~~~d~~~~D~L~~l~~Dp~T~~Ivly~Ei---~g~~f~ 725 (829)
T 3pff_A 649 SKLYRPGSVAYVSRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEI---GGTEEY 725 (829)
T ss_dssp TTTTSCCSEEEEESCHHHHHHHHHHHHHHSSCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEES---SSSHHH
T ss_pred cccCCCCcEEEEechhHHHHHHHHHHHHcCCCeEEEEecCCCCCCCCCHHHHHHHHhhCCCCCEEEEEEec---CchHHH
Confidence 66679999999999999999999999999999999999999966699999999999999999999999993 467788
Q ss_pred HHHHhC---CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHH
Q 007327 242 EALKQG---KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKLV 318 (608)
Q Consensus 242 ~~~r~a---~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~~ 318 (608)
+++|++ +++||||++|+|||++++++++++|||||++|++.+++++|+++|||+|+++|++++||+++++.++++|.
T Consensus 726 ~aA~~~~~~~~~KPVVa~kaGrsa~~~~~~~~~sHtGAlag~~~~ta~~~~aa~r~aGvi~v~~~~el~~~~~~~~~~l~ 805 (829)
T 3pff_A 726 KICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALKEAGVFVPRSFDELGEIIQSVYEDLV 805 (829)
T ss_dssp HHHHHHHTTSCCSCEEEEEECSSTTC---------------CGGGSHHHHHHHHHHTTCBCCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCEEEEEecCcCcccccccccccccccccCCcccHHHHHHHHHHcCCeEcCCHHHHHHHHHHHHHHHH
Confidence 888776 58999999999999986555788999999999998899999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCC
Q 007327 319 EEGKIPPVKEVTP 331 (608)
Q Consensus 319 ~~G~~~~~~~~~~ 331 (608)
.+|.+.|.++.++
T Consensus 806 ~~~~~~~~~~~~~ 818 (829)
T 3pff_A 806 ANGVIVPAQEVPA 818 (829)
T ss_dssp HTTSCCC------
T ss_pred HCCcEeeCCCCCc
Confidence 9999999776443
No 3
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=100.00 E-value=1.4e-61 Score=503.70 Aligned_cols=286 Identities=29% Similarity=0.454 Sum_probs=235.8
Q ss_pred cCCCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCC
Q 007327 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~ 78 (608)
++.||+|+++++|.|++++ ++++|+++|| +.|++|| |++.+ +++.|+|||+|++|++++.++
T Consensus 6 ~~~l~~~~~~vvV~Gasg~~G~~~~~~l~~~g~------~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~~~ 71 (297)
T 2yv2_A 6 MAVLVDSETRVLVQGITGREGSFHAKAMLEYGT------KVVAGVT-PGKGG-------SEVHGVPVYDSVKEALAEHPE 71 (297)
T ss_dssp ---CCSTTCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHCTT
T ss_pred hhHhhCCCCEEEEECCCCCHHHHHHHHHHhCCC------cEEEEeC-CCCCC-------ceECCEeeeCCHHHHhhcCCC
Confidence 5789999999999898877 8999999876 3789999 97642 578999999999998764313
Q ss_pred ccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccc
Q 007327 79 ADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDN 158 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~ 158 (608)
+|++|+++|++. +.+++++|.++|+|.+|++|+||+|.++++|+++|+++|+|++||||+|++||.. .+ ++++.
T Consensus 72 ~DvaIi~vp~~~-~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPNc~Gii~~~~-~~---~~~~~- 145 (297)
T 2yv2_A 72 INTSIVFVPAPF-APDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGATIIGPNCPGAITPGQ-AK---VGIMP- 145 (297)
T ss_dssp CCEEEECCCGGG-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSSCEEEETTT-EE---EESCC-
T ss_pred CCEEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCCCCeeEcccc-cc---eeecc-
Confidence 899999999986 7788888888999999999999999999999999999999999999999999987 44 34433
Q ss_pred cccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHH
Q 007327 159 IIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 238 (608)
Q Consensus 159 ~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~ 238 (608)
...++||+||||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| ++++++
T Consensus 146 ---~~~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E-~~~~~~ 221 (297)
T 2yv2_A 146 ---GHIFKEGGVAVVSRSGTLTYEISYMLTRQGIGQSTVIGIGGDPIVGLSFTEALKLFQEDPQTEALVLIGE-IGGDME 221 (297)
T ss_dssp ---GGGCCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEC-SSSSHH
T ss_pred ---cCCCCCCCEEEEECCHHHHHHHHHHHHHcCCCeeEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHH
Confidence 2335899999999999999999999999999999999999999778899999999999999999999999 899988
Q ss_pred HHHHHHHhC-CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007327 239 SLVEALKQG-KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 315 (608)
Q Consensus 239 ~f~~~~r~a-~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~ 315 (608)
+|.+...++ +++||||++|+||+++. . +++||||++++...+++++|+++|||+|++++++++||++++++++.
T Consensus 222 ~~~~~~~~~~~~~KPVv~~k~G~s~~~--~-~~~sHtgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~~~~ 296 (297)
T 2yv2_A 222 ERAAEMIKKGEFTKPVIAYIAGRTAPP--E-KRMGHAGAIIMMGTGTYEGKVKALREAGVEVAETPFEVPELVRKALR 296 (297)
T ss_dssp HHHHHHHHTTSCCSCEEEEESCCC---------------------CSHHHHHHHHHTTTCEEESSGGGHHHHHHHHC-
T ss_pred HHHHHHHHhccCCCCEEEEEeCCCCcc--c-cccCCccccccCCCCCHHHHHHHHHHcCCeEeCCHHHHHHHHHHHhh
Confidence 877666554 58999999999999943 2 33899999996555556999999999999999999999999987763
No 4
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=100.00 E-value=4.5e-61 Score=501.19 Aligned_cols=285 Identities=27% Similarity=0.419 Sum_probs=252.9
Q ss_pred cCCCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCC
Q 007327 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~ 78 (608)
++.||+|+++|||.|++++ ++++|+++|| +.|++|| |++.+ +++.|+|||+|++|++++. +
T Consensus 7 ~~~l~~~~siaVV~Gasg~~G~~~~~~l~~~G~------~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~ 71 (305)
T 2fp4_A 7 KHLYVDKNTKVICQGFTGKQGTFHSQQALEYGT------NLVGGTT-PGKGG-------KTHLGLPVFNTVKEAKEQT-G 71 (305)
T ss_dssp GGGCCCTTCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-C
T ss_pred HHHHhCCCcEEEEECCCCCHHHHHHHHHHHCCC------cEEEEeC-CCcCc-------ceECCeeeechHHHhhhcC-C
Confidence 4679999999999888766 8999999876 3688999 97642 5899999999999998644 3
Q ss_pred ccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhC-CCeEEcCCcccccccCcccccccCCccc
Q 007327 79 ADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN-NKVVIGPATVGGIQAGAFKIGDTAGTID 157 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~-g~rvlGPNc~Gi~~~~~~~l~~~~~~~~ 157 (608)
+|+++|++|++. +++++++|.++|+|.+|++|+||++.+++++++.|+++ |++++||||+|+++|.. .+ ++++
T Consensus 72 vD~avI~vP~~~-~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~liGPnc~Gii~p~~-~~---~~~~- 145 (305)
T 2fp4_A 72 ATASVIYVPPPF-AAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGE-CK---IGIM- 145 (305)
T ss_dssp CCEEEECCCHHH-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCEEECSSSCEEEETTT-EE---EESS-
T ss_pred CCEEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcEEEeCCCCeEecccc-cc---eeec-
Confidence 899999999986 77888888889999999999999998889999999999 99999999999999987 44 3433
Q ss_pred ccccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCcc-
Q 007327 158 NIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD- 236 (608)
Q Consensus 158 ~~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~- 236 (608)
|...++||+||||||||++++++++|+.++|+|||++||+||+++.|+|+.|+|+||.+||+||+|++|+| ++++
T Consensus 146 ---~~~~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S~~vs~G~~~~~~~~~~d~l~~~~~Dp~T~~I~l~~E-~~g~~ 221 (305)
T 2fp4_A 146 ---PGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDFTDCLEIFLNDPATEGIILIGE-IGGNA 221 (305)
T ss_dssp ---CGGGCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSCCHHHHHHHHHHCTTCCEEEEEEE-SSSSH
T ss_pred ---cccCCCCCCEEEEecchHHHHHHHHHHHhcCCCeeEEeccCCCcCCCCCHHHHHHHHhcCCCCcEEEEEEe-cCCch
Confidence 33345899999999999999999999999999999999999998778999999999999999999999999 7754
Q ss_pred ---HHHHHHHHHhCCCCCCEEEEEeCCCc-cCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHH
Q 007327 237 ---EYSLVEALKQGKVNKPVVAWVSGTCA-RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 312 (608)
Q Consensus 237 ---~~~f~~~~r~a~~~KPVvvlk~Grs~-~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~ 312 (608)
+++|++++++++++||||++|+||++ .| ++ +||||++++...+++++|+++|||+|++++++++||+++++.
T Consensus 222 e~~~~~f~~~~~~~~~~KPVv~~k~G~s~~~g--~~--~~Htgal~~~~~g~~~~~~aa~~~aGv~~v~~~~el~~~~~~ 297 (305)
T 2fp4_A 222 EENAAEFLKQHNSGPKSKPVVSFIAGLTAPPG--RR--MGHAGAIIAGGKGGAKEKITALQSAGVVVSMSPAQLGTTIYK 297 (305)
T ss_dssp HHHHHHHHHHHSCSTTCCCEEEEEECTTCCTT--CC--CSSTTCCCBTTBCCHHHHHHHHHHTTCEECSSTTCHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCCCEEEEEecCCcccc--cc--ccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHH
Confidence 78999998886689999999999999 45 33 899999996555566999999999999999999999999999
Q ss_pred HHHH
Q 007327 313 TFEK 316 (608)
Q Consensus 313 ~~~~ 316 (608)
++.+
T Consensus 298 ~~~~ 301 (305)
T 2fp4_A 298 EFEK 301 (305)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8863
No 5
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.2e-60 Score=495.85 Aligned_cols=283 Identities=26% Similarity=0.402 Sum_probs=233.6
Q ss_pred cCCCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCC
Q 007327 3 TGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 3 ~~~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~ 78 (608)
.+.||+|+++++|.|++++ ++++|+++|| +.|++|| |++.+ +++.|+|||+|++|++++. +
T Consensus 6 l~~l~~~~~~v~V~Gasg~~G~~~~~~l~~~g~------~~V~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~ 70 (294)
T 2yv1_A 6 KMILLDENTKAIVQGITGRQGSFHTKKMLECGT------KIVGGVT-PGKGG-------QNVHGVPVFDTVKEAVKET-D 70 (294)
T ss_dssp -CCSSCTTCCEEEETTTSHHHHHHHHHHHHTTC------CEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-C
T ss_pred HHHHhCCCCEEEEECCCCCHHHHHHHHHHhCCC------eEEEEeC-CCCCC-------ceECCEeeeCCHHHHhhcC-C
Confidence 3679999999998898777 8999999876 3789999 97642 5789999999999987643 3
Q ss_pred ccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccc
Q 007327 79 ADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDN 158 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~ 158 (608)
+|++||++|++. +.+++++|.++|++.+|++|+||+|.++++|+++|+++|++++||||+|++||.. .+ ++++.
T Consensus 71 ~Dv~ii~vp~~~-~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPNc~Gii~~~~-~~---~~~~~- 144 (294)
T 2yv1_A 71 ANASVIFVPAPF-AKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPNTPGIASPKV-GK---LGIIP- 144 (294)
T ss_dssp CCEEEECCCHHH-HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSSCCEEEETTT-EE---EECCC-
T ss_pred CCEEEEccCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCCCceeeccCc-ce---eeecc-
Confidence 899999999986 7788888888999999999999999999999999999999999999999999987 44 34432
Q ss_pred cccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHH
Q 007327 159 IIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY 238 (608)
Q Consensus 159 ~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~ 238 (608)
...++||+||||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| ++++++
T Consensus 145 ---~~~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E-~~g~~~ 220 (294)
T 2yv1_A 145 ---MEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGE-IGGGAE 220 (294)
T ss_dssp ---GGGCCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEE-SSSSHH
T ss_pred ---cCCCCCCCEEEEECCHHHHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHH
Confidence 2335899999999999999999999999999999999999999778899999999999999999999999 999988
Q ss_pred HHH-HHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007327 239 SLV-EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFE 315 (608)
Q Consensus 239 ~f~-~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~ 315 (608)
+|. +.+++ ++||||++|+||+++. .+ ++||||++++...+++++|+++|||+|++++++++||++++++++.
T Consensus 221 ~~~~~~~~~--~~KPVv~~k~G~~~~~--g~-~~sHtgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~~ 293 (294)
T 2yv1_A 221 EEAAKFIEK--MKKPVIGYIAGQSAPE--GK-RMGHAGAIVEKGKGTAESKMKALEEAGAYVAKNISDIPKLLAGILG 293 (294)
T ss_dssp HHHHHHHTT--CSSCEEEEEECC----------------------CCHHHHHHHHHHHTCEECSSTTHHHHHHHHHHC
T ss_pred HHHHHHHHh--CCCCEEEEEecCCCCc--cc-cCCchhhhccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHhc
Confidence 763 34443 7999999999999943 23 3899999995555555999999999999999999999999998763
No 6
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=100.00 E-value=5.4e-60 Score=489.68 Aligned_cols=282 Identities=27% Similarity=0.437 Sum_probs=233.1
Q ss_pred CCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCcc
Q 007327 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMAD 80 (608)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vD 80 (608)
.|+++.++++|.|++|+ ++++|+++|| ++|++|| |++.+ +++.|+|||+|++|++++. ++|
T Consensus 2 ~~~~~~~~VaVvGasG~~G~~~~~~l~~~g~------~~v~~Vn-P~~~g-------~~i~G~~vy~sl~el~~~~-~~D 66 (288)
T 1oi7_A 2 ILVNRETRVLVQGITGREGQFHTKQMLTYGT------KIVAGVT-PGKGG-------MEVLGVPVYDTVKEAVAHH-EVD 66 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHS-CCS
T ss_pred eecCCCCEEEEECCCCCHHHHHHHHHHHcCC------eEEEEEC-CCCCC-------ceECCEEeeCCHHHHhhcC-CCC
Confidence 47888887777798777 8899999865 4788999 86642 5799999999999998654 389
Q ss_pred EEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccc
Q 007327 81 VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNII 160 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~ 160 (608)
++|+++|++. +.+++++|.++|++.+|++|+||++.++++++++|+++|++++||||+|++||.. .+ ++++.
T Consensus 67 v~Ii~vp~~~-~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPNc~Gii~~~~-~~---~~~~~--- 138 (288)
T 1oi7_A 67 ASIIFVPAPA-AADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGNCPGIISAEE-TK---IGIMP--- 138 (288)
T ss_dssp EEEECCCHHH-HHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESSSCEEEETTT-EE---EESSC---
T ss_pred EEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCeEEcCCC-ce---eEEcc---
Confidence 9999999986 7788888888999999999999999999999999999999999999999999987 44 34433
Q ss_pred cccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHH
Q 007327 161 HCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 240 (608)
Q Consensus 161 p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f 240 (608)
...++||+||||||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++|
T Consensus 139 -~~~~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~t~~I~l~~E-~~~~~~~~ 216 (288)
T 1oi7_A 139 -GHVFKRGRVGIISRSGTLTYEAAAALSQAGLGTTTTVGIGGDPVIGTTFKDLLPLFNEDPETEAVVLIGE-IGGSDEEE 216 (288)
T ss_dssp -GGGCCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSCCSSCHHHHHHHHHTCTTCCEEEEEEC-SSSSHHHH
T ss_pred -cCCCCCCCEEEEECCHHHHHHHHHHHHhCCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHH
Confidence 2335899999999999999999999999999999999999999778899999999999999999999999 99998887
Q ss_pred HHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHH
Q 007327 241 VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 314 (608)
Q Consensus 241 ~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~ 314 (608)
.+...+++++||||++|+|||++. .++ +||||++++...+++++|+++|||+|+++|++++||+++++.++
T Consensus 217 ~~~~~~~~~~KPVv~~k~G~~~~~--~~~-~~Htgal~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 217 AAAWVKDHMKKPVVGFIGGRSAPK--GKR-MGHAGAIIMGNVGTPESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp HHHHHHHHCCSCEEEEESCC---------------------CCSHHHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCEEEEEecCCCCc--ccc-CcchhhcccCCCCCHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 765444467999999999999943 233 89999999544455599999999999999999999999998765
No 7
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=100.00 E-value=1.6e-59 Score=515.08 Aligned_cols=305 Identities=17% Similarity=0.254 Sum_probs=247.2
Q ss_pred cCCCCCCCcEEEEEcCCc-------hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhc
Q 007327 3 TGQLFSKTTQALFYNYKQ-------LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAA 75 (608)
Q Consensus 3 ~~~l~~p~s~avv~g~~~-------~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~ 75 (608)
++.||+|+||||| |+++ +++++|+++| . ..|++|| |+. +++.|+|||+|++|+++
T Consensus 2 l~~l~~p~siAVv-Gas~~~~~~g~~v~~~l~~~g-~-----~~v~pVn-P~~---------~~i~G~~~y~sl~~lp~- 63 (457)
T 2csu_A 2 LDYFFNPKGIAVI-GASNDPKKLGYEVFKNLKEYK-K-----GKVYPVN-IKE---------EEVQGVKAYKSVKDIPD- 63 (457)
T ss_dssp CCTTTSCSEEEEE-TCCSCTTSHHHHHHHHHTTCC-S-----SEEEEEC-SSC---------SEETTEECBSSTTSCSS-
T ss_pred hhHhcCCCeEEEE-CcCCCCCchHHHHHHHHHHcC-C-----CEEEEEC-CCC---------CeECCEeccCCHHHcCC-
Confidence 4689999999999 6553 2999999985 3 4699999 864 48999999999999865
Q ss_pred CCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHH------HHHHHHHHHHhCCCeEEcCCcccccccCcccc
Q 007327 76 HPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEA------DTKQLIAYARSNNKVVIGPATVGGIQAGAFKI 149 (608)
Q Consensus 76 ~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~------~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l 149 (608)
++|+++|+||++. +++++++|.++|+|.++++|+||+|. .+++++++|+++|+|++||||+|++||.. ++
T Consensus 64 --~~Dlavi~vp~~~-~~~~v~e~~~~Gi~~vv~~s~G~~e~g~~g~~~~~~l~~~a~~~g~~viGPnc~Gv~~~~~-~~ 139 (457)
T 2csu_A 64 --EIDLAIIVVPKRF-VKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTHV-DL 139 (457)
T ss_dssp --CCSEEEECSCHHH-HHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTCEEECSSCCEEEEGGG-TE
T ss_pred --CCCEEEEecCHHH-HHHHHHHHHHcCCCEEEEecCCCCccccccHHHHHHHHHHHHHcCCEEEcCCcceEEccCC-Cc
Confidence 4899999999986 78888889999999999999999874 38999999999999999999999999998 66
Q ss_pred cccCCcccccccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEE
Q 007327 150 GDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVL 229 (608)
Q Consensus 150 ~~~~~~~~~~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly 229 (608)
+++|.+..+ . |+||||||||++++++++|+.++|+|||++||+||++ |+++.|+|+||.+||+||+|++|
T Consensus 140 ---~~~~~~~~~----~-G~v~~vsqSG~~~~~~~~~~~~~g~G~s~~vs~G~~~--~~~~~d~l~~~~~D~~t~~I~l~ 209 (457)
T 2csu_A 140 ---NATFITVAK----K-GNVAFISQSGALGAGIVYKTIKEDIGFSKFISVGNMA--DVDFAELMEYLADTEEDKAIALY 209 (457)
T ss_dssp ---EEESSCCCE----E-CSEEEEESCHHHHHHHHHHHHHTTCEESEEEECTTCC--SSCHHHHHHHHTTCSSCCEEEEE
T ss_pred ---eeeecCCCC----C-CCEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCCcC--CCCHHHHHHHHhcCCCCCEEEEE
Confidence 677764432 3 9999999999999999999999999999999999999 99999999999999999999999
Q ss_pred EecCCccHHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHH
Q 007327 230 GELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESA 309 (608)
Q Consensus 230 ~E~g~~~~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~ 309 (608)
+| +++|+++|++++|+++++||||++|+||++.| +++++||||+++|++ ++|+++|||+|++++++++|+++.
T Consensus 210 ~E-~i~~~~~f~~~a~~~~~~KPVv~~k~G~~~~g--~~aa~~Htgalag~~----~~~~AafRqaGv~~v~~~~El~~~ 282 (457)
T 2csu_A 210 IE-GVRNGKKFMEVAKRVTKKKPIIALKAGKSESG--ARAASSHTGSLAGSW----KIYEAAFKQSGVLVANTIDEMLSM 282 (457)
T ss_dssp ES-CCSCHHHHHHHHHHHHHHSCEEEEECC--------------------CH----HHHHHHHHHTTCEEESSHHHHHHH
T ss_pred Ee-cCCCHHHHHHHHHHhcCCCCEEEEEcCCCccc--cchhhcccCccCCcH----HHHHHHHHhCCCeEECCHHHHHHH
Confidence 99 99999999999999888999999999999999 999999999999998 999999999999999999999987
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCchhhhHHHHhcccCCcchhhhheeccCCCC
Q 007327 310 IKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEE 364 (608)
Q Consensus 310 ~~~~~~~~~~~G~~~~~~~~~~p~~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~ 364 (608)
.+.+.. +.|..++ +.++.+...........+...|.+
T Consensus 283 ~~~l~~--------------~~~~g~r----vaiitngGG~~~laaD~~~~~Gl~ 319 (457)
T 2csu_A 283 ARAFSQ--------------PLPRGNK----VAIMTNAGGPGVLTADELDKRGLK 319 (457)
T ss_dssp HTTTTS--------------CCCSSSE----EEEEESCHHHHHHHHHHHHTTTCE
T ss_pred HHHhcC--------------CCCCCCc----EEEEECCHHHHHHHHHHHHHcCCC
Confidence 653321 2233333 556676666666666655555544
No 8
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=100.00 E-value=9.3e-58 Score=473.11 Aligned_cols=281 Identities=28% Similarity=0.416 Sum_probs=244.9
Q ss_pred CCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCcc
Q 007327 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMAD 80 (608)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vD 80 (608)
.|++++++++|.|++|+ ++++|.++|| ++|++|| |++.+ +++.|+|+|+|++|++.+. ++|
T Consensus 2 ~~~~~~~rVaViG~sG~~G~~~~~~l~~~g~------~~V~~V~-p~~~g-------~~~~G~~vy~sl~el~~~~-~~D 66 (288)
T 2nu8_A 2 ILIDKNTKVICQGFTGSQGTFHSEQAIAYGT------KMVGGVT-PGKGG-------TTHLGLPVFNTVREAVAAT-GAT 66 (288)
T ss_dssp CSCCTTCEEEEETTTSHHHHHHHHHHHHHTC------EEEEEEC-TTCTT-------CEETTEEEESSHHHHHHHH-CCC
T ss_pred eecCCCCEEEEECCCChHHHHHHHHHHHCCC------eEEEEeC-CCccc-------ceeCCeeccCCHHHHhhcC-CCC
Confidence 47888877777798777 8999998865 4788998 86532 4789999999999987643 489
Q ss_pred EEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccc
Q 007327 81 VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNII 160 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~ 160 (608)
+++|++|+.. ..+++++|.++|++.+|++|+||++.++++|++.|+++|++++||||+|++||.. ++ ++++
T Consensus 67 ~viI~tP~~~-~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc~Gi~~p~~-~~---~~~~---- 137 (288)
T 2nu8_A 67 ASVIYVPAPF-CKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPGVITPGE-CK---IGIQ---- 137 (288)
T ss_dssp EEEECCCGGG-HHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCEEEETTT-EE---EESS----
T ss_pred EEEEecCHHH-HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCcceecCCc-ce---eEec----
Confidence 9999999986 6778888888999999999999999999999999999999999999999999997 54 3332
Q ss_pred cccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHH
Q 007327 161 HCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSL 240 (608)
Q Consensus 161 p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f 240 (608)
|...++||+||+|||||++++++++|+.++|+|||++||+||+++.|+++.|+|+||.+||+||+|++|+| +++++++|
T Consensus 138 ~~~~~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E-~~~~~~~~ 216 (288)
T 2nu8_A 138 PGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGE-IGGSAEEE 216 (288)
T ss_dssp CTTSCCEEEEEEEESCHHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEE-SSSSHHHH
T ss_pred ccCCCCCCCEEEEECcHHHHHHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEe-eCCCHHHH
Confidence 33345899999999999999999999999999999999999999888999999999999999999999999 99988887
Q ss_pred HHHHHhCCCCCCEEEEEeCCCc-cCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHH
Q 007327 241 VEALKQGKVNKPVVAWVSGTCA-RLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 314 (608)
Q Consensus 241 ~~~~r~a~~~KPVvvlk~Grs~-~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~ 314 (608)
.+...+++++||||++|+||++ .| ++ +||||++++...+++++|+++|||+|++++++++||+++++..+
T Consensus 217 ~~~~~~~~~~KPVv~~k~G~~~~~g--~~--~~Htga~~~~~~g~~~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 217 AAAYIKEHVTKPVVGYIAGVTAPKG--KR--MGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp HHHHHHHHCCSCEEEEEECTTCCTT--CC--CSSTTCCCCTTCCCHHHHHHHHHHTTCEECSSGGGHHHHHHHHC
T ss_pred HHHHHHhcCCCCEEEEEeCCCCccc--cc--ccchhhhhccCCccHHHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 7655444689999999999999 45 33 89999999655566699999999999999999999999998754
No 9
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=2.2e-56 Score=482.52 Aligned_cols=237 Identities=21% Similarity=0.318 Sum_probs=216.3
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCC-----CChhHHHHHHHHHHH
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRS-----LPRYCTQFIEICIML 409 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~-----~~~~~~~~l~~~lvl 409 (608)
....++++|+|++|+|++++|+ ++.|+++++|..+++ +.+||++|+ ++.+ |++..+++||.+|||
T Consensus 164 ~~~~~a~rLiAk~ptiaa~~yr--~~~g~~~~~p~~~ls-------~a~nfl~ml-~g~~~~~~~~~~~~~~~ld~~LiL 233 (436)
T 2h12_A 164 NRDLAAMRLIAKIPTIAAWAYK--YTQGEAFIYPRNDLN-------YAENFLSMM-FARMSEPYKVNPVLARAMNRILIL 233 (436)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH--HHHTCCCCCCCTTSC-------HHHHHHHHH-HCBTTBCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCccCCCCHHHHHHHHhhhee
Confidence 4567899999999999999999 677888999999998 899999999 5654 888999999999999
Q ss_pred hcCCCCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcC--CCcCCC
Q 007327 410 CADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKG--IRVPGI 486 (608)
Q Consensus 410 ~aDHgl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~--~~ipGF 486 (608)
|||||+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++++. +++++||++.++++ ++||||
T Consensus 234 hADHe~NaST-ftaRvvaSt~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~v~~~i~~~l~~~~g~~imGF 311 (436)
T 2h12_A 234 HADHEQNAST-STVRLAGSTGANPFACIAAGIAALWGPAHGGANEAVLKMLARIGKK-ENIPAFIAQVKDKNSGVKLMGF 311 (436)
T ss_dssp HSCCSSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHCTTSCCCCTTB
T ss_pred ecCCCCchHH-HHHHHHHhcCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhccCCCcccCC
Confidence 9999999999 999999999999999999999998 999999999999999999876 68999999999965 999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHh----CC-CChHHHHHHHHHHHHhhc----cCCcccchhhHHHHHHHHhcccCCCCC
Q 007327 487 GHRIKRGDNRDKRVELLQKFARTH----FP-SVKYMEYAVQVETYTLSK----ANNLVLNVDGAIGSLFLDLLAGSGMFS 557 (608)
Q Consensus 487 GH~vy~~~~~DPRa~~L~~~~~~~----~~-~~~~~~~a~~~e~~~~~~----~~~l~~Nvd~~~a~l~~~lG~~~~~f~ 557 (608)
||||||. .|||+++|+++++++ +. +++++++++++|+++.++ .|+++||||||+|+++++||||.+|||
T Consensus 312 GHrVYk~--~DPRa~iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~~~~~~~k~l~pNVDfysg~i~~~lGiP~~~ft 389 (436)
T 2h12_A 312 GHRVYKN--FDPRAKIMQQTCHEVLTELGIKDDPLLDLAVELEKIALSDDYFVQRKLYPNVDFYSGIILKAMGIPTSMFT 389 (436)
T ss_dssp CCSSCSS--CCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHSHHHHHTTCCBCTHHHHHHHHHHTTCCGGGHH
T ss_pred CccccCC--CCCcHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccCCCcChHHHHHHHHHHhCCChhhhh
Confidence 9999985 599999999999987 32 689999999999997554 599999999999999999999999999
Q ss_pred hhhHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcC-CCCCCC
Q 007327 558 KQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLK-QPLYRH 599 (608)
Q Consensus 558 ~~~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~-~p~~~~ 599 (608)
+ ||+++|++||+|||+||+..+ ..|.|+
T Consensus 390 ~--------------lFaisR~~GW~AH~~Eq~~~~~~kI~RP 418 (436)
T 2h12_A 390 V--------------LFAVARTTGWVSQWKEMIEEPGQRISRP 418 (436)
T ss_dssp H--------------HHHHHHHHHHHHHHHHHHHSTTCCCCCC
T ss_pred h--------------hhhhhccccHHHHHHHHHhCCCCceecc
Confidence 9 999999999999999999655 346665
No 10
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=4.6e-56 Score=477.27 Aligned_cols=238 Identities=19% Similarity=0.272 Sum_probs=214.1
Q ss_pred CchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCC----CCChhHHHHHHHHHHH
Q 007327 334 IPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR----SLPRYCTQFIEICIML 409 (608)
Q Consensus 334 ~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~----~~~~~~~~~l~~~lvl 409 (608)
...+.++++|+|++|+|+|++|+ ++.|+++++|..+++ +.+||++|+ ++. +|++.++++||++|||
T Consensus 161 ~~~~~~a~rLiAk~pti~a~~yr--~~~G~~~~~p~~~ls-------~a~NfL~ml-~~~~~~~~p~~~~~~~ld~~LiL 230 (427)
T 3msu_A 161 ESQDEVAKNIVAKIATIAAMAYR--HNHGKKFLEPKMEYG-------YAENFLYMM-FADDESYKPDELHIKAMDTIFML 230 (427)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HCSSTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHcCCCCCCCCCccC-------HHHHHHHHH-hcccccCCCCHHHHHHHHHHHhh
Confidence 35567889999999999999999 678999999999998 899999999 676 7889999999999999
Q ss_pred hcCCCCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCC--CcCCC
Q 007327 410 CADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI--RVPGI 486 (608)
Q Consensus 410 ~aDHgl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~--~ipGF 486 (608)
|||||+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++.+. ++++++|++.+++++ +||||
T Consensus 231 hADHe~N~ST-~taRvvaSt~ad~ysavaAgi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~~i~GF 308 (427)
T 3msu_A 231 HADHEQNAST-STVRLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGST-ENIDKYIAKAKDKDDPFRLMGF 308 (427)
T ss_dssp HSCCSSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCST-THHHHHHHHHHTC-----CCSB
T ss_pred ccCCCCChhH-HHHHHHHccCCCHHHHHHHHHHHccCCccCCHHHHHHHHHHHhcCc-hHHHHHHHHHHhCCCCcCcCCC
Confidence 9999999999 999999999999999999999998 999999999999999999876 689999999999999 99999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHh----C-CCChHHHHHHHHHHHHhh----ccCCcccchhhHHHHHHHHhcccCCCCC
Q 007327 487 GHRIKRGDNRDKRVELLQKFARTH----F-PSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGSLFLDLLAGSGMFS 557 (608)
Q Consensus 487 GH~vy~~~~~DPRa~~L~~~~~~~----~-~~~~~~~~a~~~e~~~~~----~~~~l~~Nvd~~~a~l~~~lG~~~~~f~ 557 (608)
|||+||. .|||+++|+++++++ + .+++++++++++|+++.+ +.|+++||||||+|+++++||||.+|||
T Consensus 309 GHrVYk~--~DPRa~~Lk~~a~~l~~~~g~~~~~~~~la~~le~~a~~d~~~~~k~l~pNVDfysg~i~~~lGip~~~ft 386 (427)
T 3msu_A 309 GHRVYKN--TDPRATAMKKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFT 386 (427)
T ss_dssp CCSSSSS--CCHHHHHHHHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHH
T ss_pred CCCCCCC--CCccHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhcccccccCCCCChHHHHHHHHHHcCCCccccc
Confidence 9999985 699999999998875 2 368999999999999864 2689999999999999999999999999
Q ss_pred hhhHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcC-CCCCCC
Q 007327 558 KQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLK-QPLYRH 599 (608)
Q Consensus 558 ~~~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~-~p~~~~ 599 (608)
+ ||+++|++||+|||+||+..+ ..|.|+
T Consensus 387 ~--------------lFaisR~~Gw~AH~~Eq~~~p~~rI~RP 415 (427)
T 3msu_A 387 A--------------IFALARTSGWISQWIEMVNDPAQKIGRP 415 (427)
T ss_dssp H--------------HHHHHHHHHHHHHHHHHHHCTTCCCCCC
T ss_pred e--------------ehhHHhHHHHHHHHHHHHhCCCCceeCC
Confidence 9 999999999999999999753 346565
No 11
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-55 Score=472.64 Aligned_cols=244 Identities=18% Similarity=0.239 Sum_probs=221.0
Q ss_pred CCCCCCCCCCCCchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHH
Q 007327 323 IPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQF 402 (608)
Q Consensus 323 ~~~~~~~~~p~~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~ 402 (608)
++|...+ +.....++++|+|++|+|++++|+ .+.|.+++.|..+++ +.+||++|+ ++++|++.+.++
T Consensus 151 ~~~~~~~---~~~~~~~a~rLiAk~pti~a~~yr--~~~g~~~~~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ 217 (414)
T 3hwk_A 151 EDPDEDD---AAANRAKAMRMMAVLPTIVAIDMR--RRRGLPPIAPHSGLG-------YAQNFLHMC-FGEVPETAVVSA 217 (414)
T ss_dssp TCTTTTC---GGGHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHH
T ss_pred cCCcccC---HHHHHHHHHHHHHHHHHHHHHHHH--HhCCCCCCCCCcccc-------HHHHHHHHh-cCCCCCHHHHHH
Confidence 4555444 345558889999999999999999 668999999999988 889999888 788899999999
Q ss_pred HHHHHHHhcCCCCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCC
Q 007327 403 IEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481 (608)
Q Consensus 403 l~~~lvl~aDHgl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~ 481 (608)
||++||||||||+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.+++++
T Consensus 218 ld~~LiLhADHe~NaST-~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~ 295 (414)
T 3hwk_A 218 FEQSMILYAEHGFNAST-FAARVVTSTQSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEIGDP-ANAREWLRAKLARKE 295 (414)
T ss_dssp HHHHHHHTSCCSSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHHCSG-GGHHHHHHHHHHTTC
T ss_pred HHHHHhhccCCCCChHH-HHHHHHHhcCCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHhCCc-hHHHHHHHHHHhcCC
Confidence 99999999999999999 999999999999999999999998 999999999999999999876 689999999999999
Q ss_pred CcCCCCCCCCCCCCCcHHHHHHHHHHHHh---CCCChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhcccCCCCCh
Q 007327 482 RVPGIGHRIKRGDNRDKRVELLQKFARTH---FPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSK 558 (608)
Q Consensus 482 ~ipGFGH~vy~~~~~DPRa~~L~~~~~~~---~~~~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~ 558 (608)
+|||||||+||. .|||+++|+++++++ ...++++++++++|+++.+ .|+++||||||+|+++++||||.+|||+
T Consensus 296 ~I~GFGHrVyk~--~DPRa~~L~~~a~~l~~~~g~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~ 372 (414)
T 3hwk_A 296 KIMGFGHRVYRH--GDSRVPTMKRALERVGTVRDGQRWLDIYQVLAAEMAS-ATGILPNLDFPTGPAYYLMGFDIASFTP 372 (414)
T ss_dssp CCTTBCCSSCSS--CCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHCCCBCTHHHHHHHHHHHTCCGGGHHH
T ss_pred CccCCCCCCCCC--CCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCchHHHHHHHHHHhCCCHHHHHH
Confidence 999999999985 699999999999875 4567999999999999865 5899999999999999999999999988
Q ss_pred hhHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 559 QEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 559 ~~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+.. .+|.|+
T Consensus 373 --------------lFaisR~~Gw~AH~~Eq~~~-~riiRP 398 (414)
T 3hwk_A 373 --------------IFVMSRITGWTAHIMEQATA-NALIRP 398 (414)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHS-CCCCCC
T ss_pred --------------HHHHHhHHHHHHHHHHHHhc-CCCcCC
Confidence 99999999999999999954 366666
No 12
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=2.1e-55 Score=465.78 Aligned_cols=237 Identities=22% Similarity=0.297 Sum_probs=218.4
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|+|++++|+ ++.|++++.+..+++ +.+||++|+ ++++|++.+.++||++||||||||
T Consensus 109 ~~~~~a~~Lia~~p~i~a~~~~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~aDHg 178 (363)
T 2c6x_A 109 PKTEEAIRLIAITPSIIAYRKR--WTRGEQAIAPSSQYG-------HVENYYYML-TGEQPSEAKKKALETYMILATEHG 178 (363)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------SHHHHHHHH-HSSCCCHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCCCcCCCCCCC-------HHHHHHHHH-cCCCCCHHHHHHHHHHHHHhccCC
Confidence 4457889999999999999999 666888888888888 889999888 788889999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRG 493 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~~ 493 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 179 ~n~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~ 256 (363)
T 2c6x_A 179 MNAST-FSARVTLSTESDLVSAVTAALGTMKGPLHGGAPSAVTKMLEDIGEK-EHAEAYLKEKLEKGERLMGFGHRVYKT 256 (363)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHTCCSS-TTHHHHHHHHHHTTCCCTTBCCSSCSS
T ss_pred CcHHH-HHHHHHHhcCccHHHHHHHHHHHcccCccCCchHHHHHHHHHhCCh-hhHHHHHHHHHHcCCcccCCCCcccCC
Confidence 99999 999999999999999999999998 999999999999999999765 689999999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhc------cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHhh
Q 007327 494 DNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSK------ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEI 567 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~~~~~~~~~~a~~~e~~~~~~------~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p~ 567 (608)
.|||+++|+++++++.+.++++++++++|+++.+. .|+++||||||+|+++++||||.++||+
T Consensus 257 --~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~~~g~yf~~k~l~pNVD~~sg~i~~~lG~p~~~~t~--------- 325 (363)
T 2c6x_A 257 --KDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIRLLEIYKPGRKLYTNVEFYAAAVMRAIDFDDELFTP--------- 325 (363)
T ss_dssp --CCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHSCSSCCCBCTHHHHHHHHHHTTCCGGGHHH---------
T ss_pred --CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccccccCCCCcChHHHHHHHHHHhCCChhhhhh---------
Confidence 59999999999999866889999999999998543 3999999999999999999999999988
Q ss_pred hcchhhhHhhhhhhhhhhHHHhhhcCCCCCCCC
Q 007327 568 GYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP 600 (608)
Q Consensus 568 ~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~~ 600 (608)
||+++|++||+|||+||+..+ +|.|+.
T Consensus 326 -----lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~ 352 (363)
T 2c6x_A 326 -----TFSASRMVGWCAHVLEQAENN-MIFRPS 352 (363)
T ss_dssp -----HHHHHHHHHHHHHHHHHTTTC-CCCCCE
T ss_pred -----hhHHhccccHHHHHHHHHHcC-CccCCc
Confidence 999999999999999999765 777773
No 13
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=3.9e-55 Score=464.71 Aligned_cols=234 Identities=24% Similarity=0.320 Sum_probs=212.3
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|+|++++|+ .+.|++++.+..+++ +.+||++|+ +++. +..+++||++||||||||
T Consensus 110 ~~~~~a~~lia~~p~i~a~~y~--~~~g~~~i~p~~~l~-------~a~nfl~ml-~~~~--~~~~~~ld~~LvL~ADHg 177 (367)
T 2p2w_A 110 DLREKAIRVASVFPTILAYYYR--YSKGKELIRPRKDLS-------HVENFYYMM-FGER--NEKIRLLESAFILLMEQD 177 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSCC--CTTHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHcCCCCCCCCCCCC-------HHHHHHHHh-cCCC--hHHHHHHHHHHhHhccCC
Confidence 4457889999999999999999 566888888888888 889999998 5654 778999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRG 493 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~~ 493 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 178 ~NaST-ftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~i~GfGHrVyk~ 255 (367)
T 2p2w_A 178 INAST-FAALVIASTLSDLYSCIVGALGALKGPLHGGASEKVPPMLEEIGSE-DRVEEFVQKCLKEKRKIMGFGHRVYKT 255 (367)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCSS
T ss_pred CchHH-HHHHHHHhcCccHHHHHHHHHHHccCCccCChHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCccccCCccccCC
Confidence 99999 999999999999999999999998 999999999999999999876 689999999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhc-cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHhhhcchh
Q 007327 494 DNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSK-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNG 572 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~~~~~~~~~~a~~~e~~~~~~-~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p~~~~~~ 572 (608)
.|||+++|+++++++.+.++++++++++|+++.+. .|+++||||||+|+++++||||.++||+
T Consensus 256 --~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~~~~k~l~pNVDf~sg~v~~~lGip~~~~t~-------------- 319 (367)
T 2p2w_A 256 --YDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIVSNKIKNIYPNVDLYSSVLFEELGFPRNMFTA-------------- 319 (367)
T ss_dssp --CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTGGGCCBCHHHHHHHHHHHTTCCGGGHHH--------------
T ss_pred --CCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHhCCChhhhhh--------------
Confidence 59999999999999855679999999999997652 3899999999999999999999999999
Q ss_pred hhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 573 LFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 573 lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+ +|.|+
T Consensus 320 lFai~R~~Gw~AH~~Eq~~~~-~iiRP 345 (367)
T 2p2w_A 320 LFATARVVGWTAHVIEYVSDN-KLIRP 345 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-CCCCC
T ss_pred HHHHhccccHHHHHHHHHhcC-CccCc
Confidence 999999999999999999544 34443
No 14
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=6.9e-55 Score=464.26 Aligned_cols=237 Identities=23% Similarity=0.284 Sum_probs=214.5
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|++++++|+ ...|++++.|..+++ +.+||++|+ +|++|++.++++||++||||||||
T Consensus 116 ~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg 185 (377)
T 1iom_A 116 ALYEKGLDLIAKFATIVAANKR--LKEGKEPIPPREDLS-------HAANFLYMA-NGVEPSPEQARLMDAALILHAEHG 185 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccCC
Confidence 3347789999999999999999 566888888888887 778888887 788899999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRG 493 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~~ 493 (608)
+|+|| |++|+++||++|+|+|++||++++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 186 ~n~St-~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~ 263 (377)
T 1iom_A 186 FNAST-FTAIAAFSTETDLYSAITAAVASLKGPRHGGANEAVMRMIQEIGTP-ERAREWVREKLAKKERIMGMGHRVYKA 263 (377)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHCSH-HHHHHHHHHHHHTTCCCTTBSCSSCSS
T ss_pred CCchH-HHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHHHHHHHHHhcCc-hhHHHHHHHHHHCCCcccCCCCcccCC
Confidence 99999 999999999999999999999998 999999999999999999865 589999999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHhh-c-cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHhhh
Q 007327 494 DNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLS-K-ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIG 568 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~~e~~~~~-~-~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p~~ 568 (608)
.|||+++|+++++++. +.++++++++++|+++.+ . .|+++||||||+|+++++||||.++||+
T Consensus 264 --~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lG~p~~~~t~---------- 331 (377)
T 1iom_A 264 --FDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEAGKVLNPRGIYPNVDFYSGVVYSDLGFSLEFFTP---------- 331 (377)
T ss_dssp --CCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTTTTCCBCHHHHHHHHHHHTTCCGGGHHH----------
T ss_pred --CCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHcCCCHHhhhh----------
Confidence 5999999999999872 568999999999999754 2 3899999999999999999999999988
Q ss_pred cchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 569 YLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 569 ~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+....++.|+
T Consensus 332 ----lF~i~R~~Gw~AH~~Eq~~~~~~i~RP 358 (377)
T 1iom_A 332 ----IFAVARISGWVGHILEYQELDNRLLRP 358 (377)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred ----HHHHhccccHHHHHHHHHhhcCCcccc
Confidence 999999999999999999733355555
No 15
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=4.8e-55 Score=465.49 Aligned_cols=238 Identities=23% Similarity=0.310 Sum_probs=217.2
Q ss_pred CchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCC
Q 007327 334 IPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH 413 (608)
Q Consensus 334 ~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDH 413 (608)
.....++++|+|++|+|++++|+ ++.|++++.+..+++ +.+||++|+ ++++|++.++++||++|||||||
T Consensus 114 ~~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADH 183 (377)
T 1o7x_A 114 ENDKEKAISIIAKMATLVANVYR--RKEGNKPRIPEPSDS-------FAKSFLLAS-FAREPTTDEINAMDKALILYTDH 183 (377)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCCCSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhcCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhccC
Confidence 34567889999999999999999 666888888888888 888999887 78888999999999999999999
Q ss_pred CCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHH-HcCCCcCCCCCCCC
Q 007327 414 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIK 491 (608)
Q Consensus 414 gl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l-~~~~~ipGFGH~vy 491 (608)
|+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++.+. ++++++|++.+ +++++|||||||+|
T Consensus 184 g~n~St-~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvy 261 (377)
T 1o7x_A 184 EVPAST-TAALVAASTLSDMYSSLTAALAALKGPLHGGAAEEAFKQFIEIGDP-NRVQNWFNDKVVNQKNRLMGFGHRVY 261 (377)
T ss_dssp SCCHHH-HHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHTTTTCCCCTTBCCSSC
T ss_pred CCChHH-HHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHhcCCcccCCCcccc
Confidence 999999 999999999999999999999998 999999999999999999765 68999999999 99999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhC---CC-ChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhcccCCCCChhhHHHHH
Q 007327 492 RGDNRDKRVELLQKFARTHF---PS-VKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIV 565 (608)
Q Consensus 492 ~~~~~DPRa~~L~~~~~~~~---~~-~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~ 565 (608)
|. .|||+++|+++++++. +. ++++++++++|+++.+ +.|+++||||||+|+++++||||.++||+
T Consensus 262 k~--~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lG~p~~~~t~------- 332 (377)
T 1o7x_A 262 KT--YDPRAKIFKKLALTLIERNADARRYFEIAQKLEELGIKQFSSKGIYPNTDFYSGIVFYALGFPVYMFTA------- 332 (377)
T ss_dssp SS--CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTTCCBCTTTTHHHHHHHHTCCGGGHHH-------
T ss_pred CC--CCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHhCCChhhhhh-------
Confidence 85 5999999999999883 34 6899999999999865 26899999999999999999999999988
Q ss_pred hhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 566 EIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 566 p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+.+|.|+
T Consensus 333 -------lF~i~R~~Gw~AH~~Eq~~~~~~i~RP 359 (377)
T 1o7x_A 333 -------LFALSRTLGWLAHIIEYVEEQHRLIRP 359 (377)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred -------HHHHhhhccHHHHHHHHHhccCCccCC
Confidence 999999999999999999873466666
No 16
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=1.2e-56 Score=482.16 Aligned_cols=251 Identities=20% Similarity=0.286 Sum_probs=223.5
Q ss_pred CCCCCCCCCCCCCCchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCC-----CC
Q 007327 321 GKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKR-----SL 395 (608)
Q Consensus 321 G~~~~~~~~~~p~~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~-----~~ 395 (608)
+.++|+..+......++.++++|+|++|+|+|++|+ ++.|+++++|..+++ +.+||++|+ ++. +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~a~rLiAk~pti~a~~yr--~~~G~~~~~p~~~ls-------~a~nfl~ml-~g~~~~~~~p 211 (426)
T 3l96_A 142 AAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYK--YSIGQPFVYPRNDLS-------YAGNFLNMM-FSTPCEPYEV 211 (426)
T ss_dssp GGTCGGGCCTTSHHHHHHHHHHHHHHHHHHHHHHHH--HHHTCCCCCCCTTSC-------HHHHHHHHH-HCBTTBCCCC
T ss_pred HhhCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCCCCCC-------HHHHHHHHh-cCCCcccCCC
Confidence 345665554333334557889999999999999999 667999999999998 899999999 666 78
Q ss_pred ChhHHHHHHHHHHHhcCCCCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHH
Q 007327 396 PRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVE 474 (608)
Q Consensus 396 ~~~~~~~l~~~lvl~aDHgl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~ 474 (608)
++.+.++||++||||||||+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|+
T Consensus 212 ~~~~~~~ld~~LiLhADHe~N~ST-~taRvvaSt~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~ 289 (426)
T 3l96_A 212 NPILERAMDRILILHADHEQNAST-STVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEIGKK-ENIPEFVR 289 (426)
T ss_dssp CHHHHHHHHHHHHTTSCCSSCHHH-HHHHHHHHTTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHCCSS-SSTTTTSG
T ss_pred CHHHHHHHHHHHhhcccCCCCchH-HHHHHHhccCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHhcCc-hhHHHHHH
Confidence 889999999999999999999999 999999999999999999999998 999999999999999999766 68999999
Q ss_pred HHHHcCC--CcCCCCCCCCCCCCCcHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHhh----ccCCcccchhhHHHH
Q 007327 475 SMKKKGI--RVPGIGHRIKRGDNRDKRVELLQKFARTH----FPSVKYMEYAVQVETYTLS----KANNLVLNVDGAIGS 544 (608)
Q Consensus 475 ~~l~~~~--~ipGFGH~vy~~~~~DPRa~~L~~~~~~~----~~~~~~~~~a~~~e~~~~~----~~~~l~~Nvd~~~a~ 544 (608)
+.+++++ +|||||||+||. .|||+++|+++++++ +..++++++++++|+++.+ +.|+++||||||+|+
T Consensus 290 ~~l~~~~~~~I~GfGHrVyk~--~DPRa~~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~~~~~~~k~l~pNVDfysg~ 367 (426)
T 3l96_A 290 RAKDKNDSFRLMGFGHRVYKN--YDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGI 367 (426)
T ss_dssp GGCCSSCCTGGGTBCCSSCSS--CCTTHHHHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHHCHHHHHHTCCBCHHHHHHH
T ss_pred HHHhCCCCcCcCCCCCCCCCC--CCccHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccccccCCCCchHHHHHH
Confidence 9999999 999999999985 699999999999865 3378999999999999864 268999999999999
Q ss_pred HHHHhcccCCCCChhhHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 545 LFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 545 l~~~lG~~~~~f~~~~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
++++||||.+|||+ ||+++|++||+|||+||+....+|.|+
T Consensus 368 i~~~lGip~~~ft~--------------lFaisR~~Gw~AH~~Eq~~~~~~I~RP 408 (426)
T 3l96_A 368 ILKAMGIPSSMFTV--------------IFAMARTVGWIAHWSEMHSDGMKIARP 408 (426)
T ss_dssp HHHHTTCCTHHHHH--------------HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred HHHHcCCCcccchh--------------hhHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 99999999999988 999999999999999999655566666
No 17
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=1e-55 Score=469.01 Aligned_cols=235 Identities=18% Similarity=0.220 Sum_probs=213.3
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCC-CCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVP-MSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH 413 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~d-l~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDH 413 (608)
...+++++|+|++|+|++++|+ .+.|++++.+..+ ++ +.+||++|+ ++++|++.+.++||++|||||||
T Consensus 117 ~~~~~a~~LiAk~p~i~a~~yr--~~~g~~~i~p~~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lil~ADH 186 (375)
T 3tqg_A 117 NEQNIADRLVAIFPAIQCYWYH--YSHHGKRIDTELDDLT-------LAGYFLHLL-LGKKAAQMAIDCMNASLILYAEH 186 (375)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHH--HHHHCCCCCCCCCCSS-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCCCcCCCCcccc-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccC
Confidence 4457889999999999999999 5567777777776 87 788888888 78889999999999999999999
Q ss_pred CCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCC
Q 007327 414 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKR 492 (608)
Q Consensus 414 gl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~ 492 (608)
|+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||+||
T Consensus 187 e~n~St-~tarvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~~~~~~~i~GfGHrVyk 264 (375)
T 3tqg_A 187 EFNAST-FAARVCSATLSDIYSAVTAAIATLRGPLHGGANEAAMDLIMLYKTP-SEAIAGIKRKLANKELIMGFGHAVYR 264 (375)
T ss_dssp SSCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTCCCCTTBCCSSCS
T ss_pred CCCHHH-HHHHHHHccCCCHHHHHHHHHHhccCcccCCHHHHHHHHHHHhcCh-hHHHHHHHHHHhcCCCccCCCCCCCC
Confidence 999999 999999999999999999999998 999999999999999998765 68999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHhhhc
Q 007327 493 GDNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGY 569 (608)
Q Consensus 493 ~~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p~~~ 569 (608)
. .|||+++|+++++++. ..++++++++++|+++.+ .|+++||||||+|+++++||||.+|||+
T Consensus 265 ~--~DPRa~~l~~~a~~l~~~~~~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~----------- 330 (375)
T 3tqg_A 265 E--RDPRNAIIKSWAQKLAPNAADGYLFDISDAIENTMQD-EKKLFPNLDFYSATAYHFLNIPTKLFTP----------- 330 (375)
T ss_dssp S--CCHHHHHHHHHHHHHTTTSTTTHHHHHHHHHHHHHHH-HHCCCBCHHHHHHHHHHHTTCCGGGHHH-----------
T ss_pred C--CCccHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCChHHHHHHHHHHcCCCHHHHHH-----------
Confidence 5 6999999999999984 468999999999999865 5899999999999999999999999988
Q ss_pred chhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 570 LNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 570 ~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
+|+++|++||+|||+||+..++ +.|+
T Consensus 331 ---lFa~sR~~Gw~AH~~Eq~~~~~-iiRP 356 (375)
T 3tqg_A 331 ---IFVMSRVTGWCAHIFEQRKDNR-IIRP 356 (375)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHSCC-CCCC
T ss_pred ---HHHHHhHHHHHHHHHHHHhcCC-CCCC
Confidence 9999999999999999986553 3354
No 18
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=6.8e-55 Score=463.42 Aligned_cols=235 Identities=18% Similarity=0.264 Sum_probs=214.6
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|+|++++|+ .+.|++++.|..+++ +.+||++|+ ++++|++.++++||++||||||||
T Consensus 115 ~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~~~nfl~ml-~g~~p~~~~~~~ld~~Lvl~aDHg 184 (371)
T 1aj8_A 115 EVYRIGISVTAKIPTIVANWYR--IKNGLEYVPPKEKLS-------HAANFLYML-HGEEPPKEWEKAMDVALILYAEHE 184 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHhHhcCCC
Confidence 3457789999999999999999 566888888888887 778888777 788899999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRG 493 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~~ 493 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||++.|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 185 ~n~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~-~~~~~~v~~~l~~~~~i~GfGHrvyk~ 262 (371)
T 1aj8_A 185 INAST-LAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVEEAIKQFMEIGSP-EKVEEWFFKALQQKRKIMGAGHRVYKT 262 (371)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHHCSG-GGHHHHHHHHHHHTCCCTTBCCSSCSS
T ss_pred CChhH-HHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchHHHHHHHHHhcCc-hhHHHHHHHHHHcCCeeecCCccccCC
Confidence 99999 999999999999999999999998 999999999999999999876 689999999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhhc--cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHhhhcch
Q 007327 494 DNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLN 571 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~~~~~~~~~~a~~~e~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p~~~~~ 571 (608)
.|||+++|+++++++ +.++++++++++|+++.+. .|+++||||||+|+++++||||.++||+
T Consensus 263 --~DPRa~~l~~~~~~~-~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~i~~~lGip~~~~t~------------- 326 (371)
T 1aj8_A 263 --YDPRARIFKKYASKL-GDKKLFEIAERLERLVEEYLSKKGISINVDYWSGLVFYGMKIPIELYTT------------- 326 (371)
T ss_dssp --CCHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHTTTTTCCBCTTTTHHHHHHTTTCCGGGHHH-------------
T ss_pred --CCccHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHHHcCCCHHhhhh-------------
Confidence 699999999999998 4689999999999998653 4899999999999999999999999888
Q ss_pred hhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 572 GLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 572 ~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||++.+ ++.|+
T Consensus 327 -lF~i~R~~Gw~AH~~Eq~~~~-~i~RP 352 (371)
T 1aj8_A 327 -IFAMGRIAGWTAHLAEYVSHN-RIIRP 352 (371)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTC-CCCCC
T ss_pred -HHHHhccccHHHHHHHHHhcC-CccCc
Confidence 999999999999999999655 45554
No 19
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=6.4e-55 Score=464.66 Aligned_cols=238 Identities=23% Similarity=0.303 Sum_probs=216.3
Q ss_pred CchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCC
Q 007327 334 IPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH 413 (608)
Q Consensus 334 ~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDH 413 (608)
.....++++|+|++|+|++++|+ ++.|++++.+..+++ +.+||++|+ ++++|++.++++||++|||||||
T Consensus 115 ~~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADH 184 (378)
T 1vgm_A 115 ATNKELAVQIIAKTATITANIYR--AKEGLKPKIPEPSES-------YAESFLAAT-FGKKPTQEEIKAMDASLILYTDH 184 (378)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCCCSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HhCCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhccC
Confidence 34457889999999999999999 666888888888887 788888887 78888999999999999999999
Q ss_pred CCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHH-HcCCCcCCCCCCCC
Q 007327 414 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIK 491 (608)
Q Consensus 414 gl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l-~~~~~ipGFGH~vy 491 (608)
|+|+|| |++|+++||++|+|+|++||++++ ||+||||+|+|++||+++.+. ++++++|++.+ +++++|||||||+|
T Consensus 185 g~n~St-~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvy 262 (378)
T 1vgm_A 185 EVPAST-TAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAFKQFVEIGSV-ENADKWFEEKIIKGKSRLMGFGHRVY 262 (378)
T ss_dssp SCCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSCCCCTTBCCSSC
T ss_pred CCchHH-HHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHHHHHHHHHhCCH-hHHHHHHHHHHHhcCCcccCCCCccc
Confidence 999999 999999999999999999999998 999999999999999999766 68999999999 99999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhC---C-CChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhcccCCCCChhhHHHHH
Q 007327 492 RGDNRDKRVELLQKFARTHF---P-SVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIV 565 (608)
Q Consensus 492 ~~~~~DPRa~~L~~~~~~~~---~-~~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~ 565 (608)
|. .|||+++|+++++++. + .++++++++++|+++.+ +.|+++||||||+|+++++||||.++||+
T Consensus 263 k~--~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~------- 333 (378)
T 1vgm_A 263 KT--YDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEKLGVDTFGSKHIYPNTDFYSGIVFYALGFPIYMFTS------- 333 (378)
T ss_dssp SS--CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHTTCCGGGHHH-------
T ss_pred CC--CCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhCCCCCChHHHHHHHHHHhCCCHHhhhH-------
Confidence 85 5999999999999883 3 56899999999999764 26899999999999999999999999988
Q ss_pred hhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 566 EIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 566 p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+.++.|+
T Consensus 334 -------lFaisR~~Gw~AH~~Eq~~~~~~i~RP 360 (378)
T 1vgm_A 334 -------LFALSRVLGWLAHIIEYVEEQHRLIRP 360 (378)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred -------HHHHHhhccHHHHHHHHHhccCCccCc
Confidence 999999999999999999873466666
No 20
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1.6e-54 Score=461.16 Aligned_cols=231 Identities=21% Similarity=0.295 Sum_probs=211.5
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|++++++|+ ++.|++++.+..+++ +.+||++|+ ++++|++.++++||++||||||||
T Consensus 112 ~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg 181 (373)
T 1vgp_A 112 RTDIKGIKLISKFPTIVANYAR--LRKGLDIIEPDPKLS-------HSENFLYML-YGDRPNEIKSKAMDVTLILHIDHE 181 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhccCC
Confidence 4456789999999999999999 666888888888887 788888887 788899999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCCCcCCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGIRVPGIGHRIKRG 493 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~~ipGFGH~vy~~ 493 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.++++++|||||||+||.
T Consensus 182 ~n~ST-~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~i~~~l~~~~~i~GfGHrvyk~ 259 (373)
T 1vgp_A 182 MNAST-FASLVVASTFSDLYSSIVAGISALKGPLHGGANYEALKMFKEIGSP-EKVNDYILNRLSNKQRIMGFGHRVYKT 259 (373)
T ss_dssp CCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCCHHHHHHHHSCSS-SSHHHHHHHHHHTTCCCTTBCCSSCSS
T ss_pred CchHH-HHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHHcCCcccCCCccccCC
Confidence 99999 999999999999999999999998 999999999999999999766 689999999999999999999999985
Q ss_pred CCCcHHHHHHHHHHHHhC---CCC--hHHHHHHHHHHHHhhc--cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHHh
Q 007327 494 DNRDKRVELLQKFARTHF---PSV--KYMEYAVQVETYTLSK--ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVE 566 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~~---~~~--~~~~~a~~~e~~~~~~--~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~p 566 (608)
.|||+++|+++++++. +.+ +++++++++|+++.+. .|+++||||||+|+++++||||.++||+
T Consensus 260 --~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~-------- 329 (373)
T 1vgp_A 260 --YDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVEEIGIKYLGPKGIYPNVDFFSSIVFYSLGFEPDFFPA-------- 329 (373)
T ss_dssp --CCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHGGGTCCBCHHHHHHHHHHHTTCCGGGHHH--------
T ss_pred --CCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhcccCCCCCChHHHHHHHHHHcCCCHHhhhh--------
Confidence 6999999999999872 344 8999999999998653 4899999999999999999999999988
Q ss_pred hhcchhhhHhhhhhhhhhhHHHhhhcC
Q 007327 567 IGYLNGLFVLARSIGLIGHTFDQKRLK 593 (608)
Q Consensus 567 ~~~~~~lf~~~R~~G~iAH~~Eq~~~~ 593 (608)
||+++|++||+|||+||+..+
T Consensus 330 ------lFaisR~~Gw~AH~~Eq~~~~ 350 (373)
T 1vgp_A 330 ------VFASARVVGWVAHIMEYIKDN 350 (373)
T ss_dssp ------HHHHHHHHHHHHHHHHHGGGC
T ss_pred ------hHHhhccccHHHHHHHHHhcC
Confidence 999999999999999999655
No 21
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=1.2e-54 Score=463.26 Aligned_cols=236 Identities=18% Similarity=0.214 Sum_probs=213.6
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|++++++|+ +..|++++.+..+++ +.+||++|+ ++++|++.++++||++||||||||
T Consensus 118 ~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg 187 (378)
T 1a59_A 118 ANLEKAMSLLATFPSVVAYDQR--RRRGEELIEPREDLD-------YSANFLWMT-FGEEAAPEVVEAFNVSMILYAEHS 187 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHcCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHHHHHHHHHhcCCC
Confidence 3447789999999999999999 666888888888887 778888887 788899999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccC--------cCHHHHHHHHHHcCCCcCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRG--------LSAYEFVESMKKKGIRVPG 485 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~--------~~~~~~v~~~l~~~~~ipG 485 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++.+.+ ++++++|++.++++++|||
T Consensus 188 ~n~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~~l~~i~~~~~~~~~~~~~~~~~~v~~~l~~~~~i~G 266 (378)
T 1a59_A 188 FNAST-FTARVITSTLADLHSAVTGAIGALKGPLHGGANEAVMHTFEEIGIRKDESLDEAATRSKAWMVDALAQKKKVMG 266 (378)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCchH-HHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHHHHHHhhcCCccccchHHHHHHHHHHHHhCCCeeeC
Confidence 99999 999999999999999999999998 9999999999999999997651 4688999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhcccCCCCChhhHH
Q 007327 486 IGHRIKRGDNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEID 562 (608)
Q Consensus 486 FGH~vy~~~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~ 562 (608)
||||+||. .|||+++|+++++++. +.++++++++++|+++.+. |+++||||||+|+++++||||.++||+
T Consensus 267 fGHrvyk~--~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~le~~~~~~-k~l~pNVD~~sg~i~~~lGip~~~~t~---- 339 (378)
T 1a59_A 267 FGHRVYKN--GDSRVPTMKSALDAMIKHYDRPEMLGLYNGLEAAMEEA-KQIKPNLDYPAGPTYNLMGFDTEMFTP---- 339 (378)
T ss_dssp BCCSSCSS--CCTTHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHH-HCCCBCTHHHHHHHHHHTTCCGGGHHH----
T ss_pred CCCcccCC--CCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH-hCCCCChHHHHHHHHHHhCCChhhcch----
Confidence 99999985 5999999999999873 5689999999999998653 899999999999999999999999988
Q ss_pred HHHhhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 563 EIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 563 ~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+ ++.|+
T Consensus 340 ----------lF~isR~~Gw~AH~~Eq~~~~-~i~RP 365 (378)
T 1a59_A 340 ----------LFIAARITGWTAHIMEQVADN-ALIRP 365 (378)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHTC-CCCCC
T ss_pred ----------hhhhhcchhHHHHHHHHHhcC-CCcCc
Confidence 999999999999999999665 35554
No 22
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=1e-54 Score=464.03 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=215.9
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCC
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHG 414 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHg 414 (608)
....++++|+|++|+|++++|+ +..|++++.+..+++ +.+||++|+ +++.|++.++++||++||||||||
T Consensus 120 ~~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~Lvl~ADHg 189 (385)
T 2ifc_A 120 TDRDVAAEMIGRMSAITVNVYR--HIMNMPAELPKPSDS-------YAESFLNAA-FGRKATKEEIDAMNTALILYTDHE 189 (385)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCCCSC-------HHHHHHHHH-HTSCCCHHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HhcCCCCCCCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHhHhcCCC
Confidence 4457889999999999999999 666888888888887 778888777 788889999999999999999999
Q ss_pred CCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHH-HcCCCcCCCCCCCCC
Q 007327 415 PCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMK-KKGIRVPGIGHRIKR 492 (608)
Q Consensus 415 l~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l-~~~~~ipGFGH~vy~ 492 (608)
+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.+ +++++|||||||+||
T Consensus 190 ~n~St-~aarv~aSt~~d~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~i~~~l~~~~~~i~GfGHrvyk 267 (385)
T 2ifc_A 190 VPAST-TAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAIAQFDEIKDP-AMVEKWFNDNIINGKKRLMGFGHRVYK 267 (385)
T ss_dssp SCHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHHHHHHHHCSG-GGHHHHHHHHTTTSSSCCTTBCCSSCS
T ss_pred ccHHH-HHHHHHHhcCCcHHHHHHHHHHHccCCccCChHHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcccCCCCcccC
Confidence 99998 999999999999999999999998 999999999999999999876 68999999999 999999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhC----CCChHHHHHHHHHHHHhh--ccCCcccchhhHHHHHHHHhcccC--CCCChhhHHHH
Q 007327 493 GDNRDKRVELLQKFARTHF----PSVKYMEYAVQVETYTLS--KANNLVLNVDGAIGSLFLDLLAGS--GMFSKQEIDEI 564 (608)
Q Consensus 493 ~~~~DPRa~~L~~~~~~~~----~~~~~~~~a~~~e~~~~~--~~~~l~~Nvd~~~a~l~~~lG~~~--~~f~~~~~~~~ 564 (608)
. .|||+++|+++++++. ..++++++++++|+++.+ ++|+++||||||+|+++++||||. ++||+
T Consensus 268 ~--~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~~~~~~~~~k~l~pNVD~~sg~v~~~lGip~~~~~~t~------ 339 (385)
T 2ifc_A 268 T--YDPRAKIFKGIAEKLSSKKPEVHKVYEIATKLEDFGIKAFGSKGIYPNTDYFSGIVYMSIGFPLRNNIYTA------ 339 (385)
T ss_dssp S--CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHGGGTCCBCTTTTHHHHHHHHTCCSGGGHHHH------
T ss_pred C--CCCchHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHcCCCcchhhhhh------
Confidence 5 5999999999999883 457899999999999865 368999999999999999999999 99888
Q ss_pred HhhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 565 VEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 565 ~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+.++.|+
T Consensus 340 --------lF~isR~~Gw~AH~~Eq~~~~~~i~RP 366 (385)
T 2ifc_A 340 --------LFALSRVTGWQAHFIEYVEEQQRLIRP 366 (385)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_pred --------HHHHhhcccHHHHHHHHHhccCCccCc
Confidence 999999999999999999773366665
No 23
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=5e-55 Score=466.86 Aligned_cols=242 Identities=21% Similarity=0.195 Sum_probs=211.9
Q ss_pred CCCCCCCCCCCCchhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHH
Q 007327 323 IPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQF 402 (608)
Q Consensus 323 ~~~~~~~~~p~~~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~ 402 (608)
++|+..+...... ..++++|+|++|+|++++|+.. ..+.++..+..+++ +.+||++|+ ++++|++.+.++
T Consensus 135 ~~~~~~d~~~~~~-~~~a~rLiAk~pti~a~~yr~~-~g~~~i~~~~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ 204 (404)
T 3o8j_A 135 TLPEKEGHTVSGA-RDIADKLLASLSSILLYWYHYS-HNGERIQPETDDDS-------IGGHFLHLL-HGEKPTQSWEKA 204 (404)
T ss_dssp HSCCCTTCCHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCCCCCSS-------HHHHHHHHH-HSSCCCHHHHHH
T ss_pred cCcccccCCcHHH-HHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCCCCCC-------HHHHHHHHh-cCCCCCHHHHHH
Confidence 4554444333222 3567899999999999999942 23444545557787 889999988 788899999999
Q ss_pred HHHHHHHhcCCCCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHcCC
Q 007327 403 IEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKKGI 481 (608)
Q Consensus 403 l~~~lvl~aDHgl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~~~ 481 (608)
||++||||||||+|+|| |++|+++||++|+|+|++|||+++ ||+||||+|+|++||+++.+. ++++++|++.+++++
T Consensus 205 ld~~LiLhADHe~N~St-~taRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~-~~~~~~v~~~l~~~~ 282 (404)
T 3o8j_A 205 MHISLVLYAEHEFNAST-FTSRVIAGTGSDVYSAIIGAIGALRGPKHGGANEVSLEIQQRYETP-DEAEADIRKRVENKE 282 (404)
T ss_dssp HHHHHHHTSCCSSSHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTCHHHHHHHHHTTCSSH-HHHHHHHHHHHHTTC
T ss_pred HHHHHhhccCCCCChHH-HHHHHHHhcCCCHHHHHHHHHHHccCCCcCCHHHHHHHHHHHhcCc-hhHHHHHHHHHhcCC
Confidence 99999999999999999 999999999999999999999998 999999999999999998765 689999999999999
Q ss_pred CcCCCCCCCCCCCCCcHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHhhccCCcccchhhHHHHHHHHhcccCCCCCh
Q 007327 482 RVPGIGHRIKRGDNRDKRVELLQKFARTHF---PSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSK 558 (608)
Q Consensus 482 ~ipGFGH~vy~~~~~DPRa~~L~~~~~~~~---~~~~~~~~a~~~e~~~~~~~~~l~~Nvd~~~a~l~~~lG~~~~~f~~ 558 (608)
+|||||||+||. .|||+++|+++++++. ..+++++++.++|+++.+ .|+++||||||+|+++++||||.++||+
T Consensus 283 ~I~GFGHrVyk~--~DPRa~~l~~~a~~l~~~~g~~~~~~~a~~le~~~~~-~k~l~pNVDf~sg~i~~~lGip~~~~t~ 359 (404)
T 3o8j_A 283 VVIGFGHPVYTI--ADPRHQVIKRVAKQLSEEGGSLKMYHIADRLETVMWE-TKKMFPNLDWFSAVSYNMMGVPTEMFTP 359 (404)
T ss_dssp CCTTBCCSSCSS--CCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH-HHCCCBCTTTHHHHHHHHTTCCGGGHHH
T ss_pred cccCCCCCCCCC--CCcHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-hcCCCcChHHHHHHHHHHcCCChHhHHH
Confidence 999999999985 6999999999999873 358999999999999864 6899999999999999999999999988
Q ss_pred hhHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcC
Q 007327 559 QEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLK 593 (608)
Q Consensus 559 ~~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~ 593 (608)
||+++|++||+|||+||+..+
T Consensus 360 --------------lFaisR~~Gw~AH~~Eq~~~~ 380 (404)
T 3o8j_A 360 --------------LFVIARVTGWAAHIIEQRQDN 380 (404)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHSC
T ss_pred --------------HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999654
No 24
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.7e-54 Score=461.45 Aligned_cols=235 Identities=23% Similarity=0.310 Sum_probs=213.3
Q ss_pred hhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCC
Q 007327 336 EDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGP 415 (608)
Q Consensus 336 ~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl 415 (608)
...++++|+|++|+|++++|+ +..|++++.+..+++ +.+||++|+ ++++|++.++++||++||||||||+
T Consensus 147 ~~~~a~~Lia~~p~i~a~~y~--~~~g~~~i~p~~~ls-------~a~nfl~ml-~g~~p~~~~~~~ld~~LvL~ADHg~ 216 (409)
T 2ibp_A 147 AYRIAEKLVAKMPTIVAYHYR--FSRGLEVVRPRDDLG-------HAANFLYMM-FGREPDPLASRGIDLYLILHADHEV 216 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HHTTCCCCCCCTTSC-------HHHHHHHHH-HSSCCCHHHHHHHHHHHHHTSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHcCCCcccCCCCCC-------HHHHHHHHH-hCCCCCHHHHHHHHHHHHHhcCCCC
Confidence 346789999999999999999 566888888888887 778888887 7888999999999999999999999
Q ss_pred CCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhccCcCHHHHHHHHHHc-CCCcCCCCCCCCCC
Q 007327 416 CVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYDRGLSAYEFVESMKKK-GIRVPGIGHRIKRG 493 (608)
Q Consensus 416 ~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~~~~~~~~~v~~~l~~-~~~ipGFGH~vy~~ 493 (608)
|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+. ++++++|++.+++ +++|||||||+||.
T Consensus 217 naST-~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~v~~ml~ei~~~-~~~~~~v~~~l~~~~~~i~GfGHrvyk~ 294 (409)
T 2ibp_A 217 PAST-FAAHVVASTLSDLYSSVAAAIAALKGPLHGGANEMAVRNYLEIGTP-AKAKEIVEAATKPGGPKLMGVGHRVYKA 294 (409)
T ss_dssp CHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHHHHHHHHHHCCG-GGHHHHHHHHTSTTCCCCTTBCCSSCSS
T ss_pred ChhH-HHHHHHhhcCCcHHHHHHHHHHHccCCccCCchHHHHHHHHHhCCH-HHHHHHHHHHHHhcCCcCcCCCccccCC
Confidence 9999 999999999999999999999998 999999999999999999876 6899999999999 99999999999985
Q ss_pred CCCcHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHhhc----cCCcccchhhHHHHHHHHhcccCCCCChhhHHHHH
Q 007327 494 DNRDKRVELLQKFARTH----FPSVKYMEYAVQVETYTLSK----ANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIV 565 (608)
Q Consensus 494 ~~~DPRa~~L~~~~~~~----~~~~~~~~~a~~~e~~~~~~----~~~l~~Nvd~~~a~l~~~lG~~~~~f~~~~~~~~~ 565 (608)
.|||+++|+++++++ ...++++++++++|+++.+. .|+++||||||+|+++++||||.++||+
T Consensus 295 --~DPRa~~L~~~a~~l~~~~~~~g~~~~~a~~le~~~l~~~~~~~k~l~pNVDf~sg~i~~~lGip~~~~t~------- 365 (409)
T 2ibp_A 295 --YDPRAKIFKEFSRDYVAKFGDPQNLFAIASAIEQEVLSHPYFQQRKLYPNVDFWSGIAFYYMGIPYEYFTP------- 365 (409)
T ss_dssp --CCHHHHHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHHCHHHHHTTCCBCGGGTHHHHHHHHTCCGGGHHH-------
T ss_pred --CCCchHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHccchhhhhcCCCCChHHHHHHHHHHhCCCHHhhhh-------
Confidence 599999999999987 44449999999999998322 5899999999999999999999999988
Q ss_pred hhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCC
Q 007327 566 EIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 599 (608)
Q Consensus 566 p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~ 599 (608)
||+++|++||+|||+||+..+ ++.|+
T Consensus 366 -------lFaisR~~Gw~AH~~Eq~~~~-~i~RP 391 (409)
T 2ibp_A 366 -------IFAMSRVVGWVAHVLEYWENN-RIFRP 391 (409)
T ss_dssp -------HHHHHHHHHHHHHHHHHGGGC-CCCCC
T ss_pred -------HHHHhccccHHHHHHHHHhcC-CccCc
Confidence 999999999999999999765 45554
No 25
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=1.8e-53 Score=460.05 Aligned_cols=240 Identities=20% Similarity=0.222 Sum_probs=214.1
Q ss_pred chhhhHHHHhcccCCcchhhhheeccCCCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCC-
Q 007327 335 PEDLNTAIKSGKVRAPTHIISTISDDRGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADH- 413 (608)
Q Consensus 335 ~~~~~~~rllA~~p~i~A~~t~I~~~~g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDH- 413 (608)
+...++++|+|++|+|++++|+.....+.+++++..+++ +.+||++|+ ++ |++...++||.+|||||||
T Consensus 168 ~~~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls-------~a~nfl~ml-~~--p~~~~~~~ld~~LiLhADHe 237 (435)
T 1csh_A 168 FVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLD-------WSHNFTNML-GY--TDPQFTELMRLYLTIHSDHE 237 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSC-------HHHHHHHHH-TC--CCHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCCC-------HHHHHHHHh-cC--CChHHHHHHHHHHHHccCCC
Confidence 445789999999999999999954434446778899998 899999998 44 7888999999999999999
Q ss_pred CCCCccchhhhhhccCCCChHHHHHHhhhcc-CCCCcCccHHHHHHHHHHhc------cCcCHHHHHHHHHHcCCCcCCC
Q 007327 414 GPCVSGAHNTIVTARAGKDLVSSLVSGLLTI-GPRFGGAIDDAARYFKDAYD------RGLSAYEFVESMKKKGIRVPGI 486 (608)
Q Consensus 414 gl~~st~~aar~~aSt~a~~~~av~agl~a~-Gp~hGGa~~~a~~~l~~~~~------~~~~~~~~v~~~l~~~~~ipGF 486 (608)
|+|+|| |++|+++||++|+|+|++|||+++ ||+||||+++|++||+++.+ ..++++++|++.++++++||||
T Consensus 238 g~N~ST-ftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~Gf 316 (435)
T 1csh_A 238 GGNVSA-HTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGY 316 (435)
T ss_dssp SCSHHH-HHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTB
T ss_pred CCchHH-HHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecC
Confidence 699999 999999999999999999999998 99999999999999987642 1257899999999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhh------ccCCcccchhhHHHHHHHHhcc-cCCCCChh
Q 007327 487 GHRIKRGDNRDKRVELLQKFARTHFPSVKYMEYAVQVETYTLS------KANNLVLNVDGAIGSLFLDLLA-GSGMFSKQ 559 (608)
Q Consensus 487 GH~vy~~~~~DPRa~~L~~~~~~~~~~~~~~~~a~~~e~~~~~------~~~~l~~Nvd~~~a~l~~~lG~-~~~~f~~~ 559 (608)
|||+||. .|||+++|+++++++.+.+++++++.++|+++.+ +.|+++||||||+|+++++||| |.+|||+
T Consensus 317 GHrVyk~--~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~- 393 (435)
T 1csh_A 317 GHAVLRK--TDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTV- 393 (435)
T ss_dssp CCSSCCS--CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHH-
T ss_pred CccccCC--CCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccc-
Confidence 9999985 5999999999999997788999999999988622 3589999999999999999999 6889988
Q ss_pred hHHHHHhhhcchhhhHhhhhhhhhhhHHHhhhcCCCCCCCCC
Q 007327 560 EIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPW 601 (608)
Q Consensus 560 ~~~~~~p~~~~~~lf~~~R~~G~iAH~~Eq~~~~~p~~~~~~ 601 (608)
||+++|++||+||++||+..++||.|+..
T Consensus 394 -------------lFaisR~~Gw~AH~~Eq~~~~~~I~RP~~ 422 (435)
T 1csh_A 394 -------------LFGVSRALGVLAQLIWSRALGFPLERPKS 422 (435)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred -------------hhhhhhhHHHHHHHHHHHhcCCCCcCcHH
Confidence 99999999999999999988878888843
No 26
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=100.00 E-value=5.1e-45 Score=398.90 Aligned_cols=242 Identities=19% Similarity=0.213 Sum_probs=198.1
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccc
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGG 141 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi 141 (608)
|+|+|+++.++.+..+++|++||+||+.. +++++++|.++|+| +||||+||+..+|++|+++||++|+||+|||| |+
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~~-v~~~v~e~~~~Gv~-~viis~Gf~~~~~~~l~~~A~~~g~rliGPNc-G~ 96 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGEY-AAELANQALDRNLN-VMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC-GT 96 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHHH-HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHHHHTTCCEECSSC-CE
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHHH-HHHHHHHHHhcCCC-EEEECCCCCHHHHHHHHHHHHHcCCEEEecCc-cc
Confidence 45554444443322225899999999987 77888889999999 99999999999999999999999999999999 98
Q ss_pred cccCcccccccCCcccccccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCC------CCCCCCHHHHHH
Q 007327 142 IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGD------VFPGSTLSDHIL 215 (608)
Q Consensus 142 ~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~------~~~dv~~~d~l~ 215 (608)
+|+ . ++ +++|.+. ++||+||||||||++++++++|+.++|+|||++||+||+ + |+++.|+|+
T Consensus 97 ~~~-~-~~---~~~f~~~-----~~~G~vaivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~--dv~~~D~l~ 164 (480)
T 3dmy_A 97 SMI-A-GT---PLAFANV-----MPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVG--GISALTALE 164 (480)
T ss_dssp EEE-T-TE---EEESCCC-----CCEEEEEEEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTT--THHHHHHHH
T ss_pred ccc-C-Cc---cccccCC-----CCCCCEEEEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccC--CCCHHHHHH
Confidence 887 4 45 6677653 369999999999999999999999999999999999999 6 999999999
Q ss_pred HhhcCCCccEEEEEEecCCccH--HHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHH
Q 007327 216 RFNNIPQVKMMVVLGELGGRDE--YSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALR 293 (608)
Q Consensus 216 ~l~~Dp~T~~I~ly~E~g~~~~--~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~ 293 (608)
||.+||+|++|++|+| ++.++ ++|++++|+ ++||||++|+|||+.+ ||
T Consensus 165 ~l~~Dp~T~~I~ly~E-~~~e~~~~~f~~~ar~--~~KPVV~~k~Grs~~g---------------------------~r 214 (480)
T 3dmy_A 165 MLSADEKSEVLAFVSK-PPAEAVRLKIVNAMKA--TGKPTVALFLGYTPAV---------------------------AR 214 (480)
T ss_dssp HHHTCTTCCEEEEEES-CCCHHHHHHHHHHHHH--HCSCEEEEETTCCCSS---------------------------SE
T ss_pred HHhcCCCCCEEEEEEe-cCCcHHHHHHHHHHHh--CCCCEEEEEeCCCCcc---------------------------cc
Confidence 9999999999999999 88877 889999986 6899999999999863 68
Q ss_pred HcCCcccCCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhHHHHhcccCCcchhhhhee
Q 007327 294 DAGAVVPTSYEAFESAIKETFEKLVEEGKIPPVKEVTPPQIPEDLNTAIKSGKVRAPTHIISTIS 358 (608)
Q Consensus 294 qaGvi~v~~~~el~~~~~~~~~~~~~~G~~~~~~~~~~p~~~~~~~~~rllA~~p~i~A~~t~I~ 358 (608)
|+|+++|+|++||+++++.|...-...+ .+++|..++ +.++.+..+........+
T Consensus 215 ~~Gvirv~~~~el~~~a~~l~~~~~~~~------~qp~~~G~r----vaivtn~Gg~gvlaaD~~ 269 (480)
T 3dmy_A 215 DENVWFASSLDEAARLACLLSRVTARRN------AIAPVSSGF----ICGLYTGGTLAAEAAGLL 269 (480)
T ss_dssp ETTEEEESSHHHHHHHHHHHHHHHHHHH------HHCCCSCCE----EEEEESCHHHHHHHHHHH
T ss_pred cCCEEEECCHHHHHHHHHHHhcCccccc------cCCCCCCCe----EEEEECCHHHHHHHHHHH
Confidence 9999999999999999998875210000 012344444 455556666665555543
No 27
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=99.82 E-value=1.2e-20 Score=174.32 Aligned_cols=117 Identities=9% Similarity=0.008 Sum_probs=94.8
Q ss_pred CCCCCCCcEEEEEcCC-------chHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcC
Q 007327 4 GQLFSKTTQALFYNYK-------QLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAH 76 (608)
Q Consensus 4 ~~l~~p~s~avv~g~~-------~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~ 76 (608)
++||+|++++|| |++ ..++++|++.||. |+++| |.+ +++.|+++|+|++|++.
T Consensus 9 ~~l~~p~~IavI-GaS~~~g~~G~~~~~~L~~~G~~-------V~~vn-p~~---------~~i~G~~~~~s~~el~~-- 68 (138)
T 1y81_A 9 SNSKEFRKIALV-GASKNPAKYGNIILKDLLSKGFE-------VLPVN-PNY---------DEIEGLKCYRSVRELPK-- 68 (138)
T ss_dssp -----CCEEEEE-TCCSCTTSHHHHHHHHHHHTTCE-------EEEEC-TTC---------SEETTEECBSSGGGSCT--
T ss_pred ccccCCCeEEEE-eecCCCCCHHHHHHHHHHHCCCE-------EEEeC-CCC---------CeECCeeecCCHHHhCC--
Confidence 579999999999 543 2289999999874 89999 865 37899999999999865
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCc
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 146 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~ 146 (608)
++|+++|++|++ .+.+++++|.++|++.+++.++++ ++++.++|+++|++++||||+|++++..
T Consensus 69 -~vDlvii~vp~~-~v~~v~~~~~~~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~igpnc~g~~~~~~ 132 (138)
T 1y81_A 69 -DVDVIVFVVPPK-VGLQVAKEAVEAGFKKLWFQPGAE----SEEIRRFLEKAGVEYSFGRCIMVETSNK 132 (138)
T ss_dssp -TCCEEEECSCHH-HHHHHHHHHHHTTCCEEEECTTSC----CHHHHHHHHHHTCEEECSCCHHHHC---
T ss_pred -CCCEEEEEeCHH-HHHHHHHHHHHcCCCEEEEcCccH----HHHHHHHHHHCCCEEEcCCcceEEccCc
Confidence 489999999986 478888889889999999999886 4688999999999999999999999976
No 28
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=99.82 E-value=4.7e-21 Score=173.35 Aligned_cols=107 Identities=7% Similarity=-0.000 Sum_probs=93.8
Q ss_pred CCCcEEEEEcCCch-------HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCcc
Q 007327 8 SKTTQALFYNYKQL-------PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMAD 80 (608)
Q Consensus 8 ~p~s~avv~g~~~~-------~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vD 80 (608)
+|+|+||| |++.+ ++++|+++||. |++|| |+. ++++|+|||+|++|+|+ +|
T Consensus 3 ~p~siAVV-GaS~~~~~~g~~v~~~L~~~g~~-------V~pVn-P~~---------~~i~G~~~y~sl~dlp~----vD 60 (122)
T 3ff4_A 3 AMKKTLIL-GATPETNRYAYLAAERLKSHGHE-------FIPVG-RKK---------GEVLGKTIINERPVIEG----VD 60 (122)
T ss_dssp CCCCEEEE-TCCSCTTSHHHHHHHHHHHHTCC-------EEEES-SSC---------SEETTEECBCSCCCCTT----CC
T ss_pred CCCEEEEE-ccCCCCCCHHHHHHHHHHHCCCe-------EEEEC-CCC---------CcCCCeeccCChHHCCC----CC
Confidence 69999999 54432 99999999874 89999 855 49999999999999753 69
Q ss_pred EEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCccccc
Q 007327 81 VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 142 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~ 142 (608)
+++|++|++. +++++++|.++|+|. |++++||. ++++.++||++|||++| ||+|++
T Consensus 61 lavi~~p~~~-v~~~v~e~~~~g~k~-v~~~~G~~---~~e~~~~a~~~Girvv~-nC~gv~ 116 (122)
T 3ff4_A 61 TVTLYINPQN-QLSEYNYILSLKPKR-VIFNPGTE---NEELEEILSENGIEPVI-GCTLVM 116 (122)
T ss_dssp EEEECSCHHH-HGGGHHHHHHHCCSE-EEECTTCC---CHHHHHHHHHTTCEEEE-SCHHHH
T ss_pred EEEEEeCHHH-HHHHHHHHHhcCCCE-EEECCCCC---hHHHHHHHHHcCCeEEC-CcCeEE
Confidence 9999999986 889999999999996 77899995 57999999999999997 999986
No 29
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=99.82 E-value=2.6e-21 Score=179.32 Aligned_cols=119 Identities=9% Similarity=0.060 Sum_probs=100.1
Q ss_pred CCCC-CCCcEEEEEcCC---c----hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhc
Q 007327 4 GQLF-SKTTQALFYNYK---Q----LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAA 75 (608)
Q Consensus 4 ~~l~-~p~s~avv~g~~---~----~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~ 75 (608)
+.|| +|+|+||| |++ + +++++|+++||. |++|| |.+.+ +++.|+|||+|++|+++
T Consensus 7 ~~ll~~p~~vaVv-Gas~~~g~~G~~~~~~l~~~G~~-------v~~vn-p~~~~-------~~i~G~~~~~sl~el~~- 69 (140)
T 1iuk_A 7 RAYLSQAKTIAVL-GAHKDPSRPAHYVPRYLREQGYR-------VLPVN-PRFQG-------EELFGEEAVASLLDLKE- 69 (140)
T ss_dssp HHHHHHCCEEEEE-TCCSSTTSHHHHHHHHHHHTTCE-------EEEEC-GGGTT-------SEETTEECBSSGGGCCS-
T ss_pred HHHHcCCCEEEEE-CCCCCCCChHHHHHHHHHHCCCE-------EEEeC-CCccc-------CcCCCEEecCCHHHCCC-
Confidence 4688 89999999 554 2 288999999873 89999 86421 58999999999999864
Q ss_pred CCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCc
Q 007327 76 HPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 146 (608)
Q Consensus 76 ~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~ 146 (608)
++|+++|++|++. +++++++|.++|+|.+++ .+|+. ++++.++|+++|+|++||||+|+++|..
T Consensus 70 --~vDlavi~vp~~~-~~~v~~~~~~~gi~~i~~-~~g~~---~~~~~~~a~~~Gir~vgpnc~g~~~~~~ 133 (140)
T 1iuk_A 70 --PVDILDVFRPPSA-LMDHLPEVLALRPGLVWL-QSGIR---HPEFEKALKEAGIPVVADRCLMVEHKRL 133 (140)
T ss_dssp --CCSEEEECSCHHH-HTTTHHHHHHHCCSCEEE-CTTCC---CHHHHHHHHHTTCCEEESCCHHHHHHHH
T ss_pred --CCCEEEEEeCHHH-HHHHHHHHHHcCCCEEEE-cCCcC---HHHHHHHHHHcCCEEEcCCccceEChhh
Confidence 4899999999975 788899999999998765 56664 5899999999999999999999998865
No 30
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=99.79 E-value=3.7e-20 Score=172.52 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=101.3
Q ss_pred CCCCC-CCcEEEEEcCC---c----hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhc
Q 007327 4 GQLFS-KTTQALFYNYK---Q----LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAA 75 (608)
Q Consensus 4 ~~l~~-p~s~avv~g~~---~----~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~ 75 (608)
+.||+ |+++||| |++ | .++++|++.||. |+++| |.+. |+++.|++||+|++|++.
T Consensus 7 ~~ll~~p~~IavI-Gas~~~g~~G~~~~~~L~~~G~~-------v~~vn-p~~~-------g~~i~G~~~~~sl~el~~- 69 (145)
T 2duw_A 7 AGILTSTRTIALV-GASDKPDRPSYRVMKYLLDQGYH-------VIPVS-PKVA-------GKTLLGQQGYATLADVPE- 69 (145)
T ss_dssp HHHHHHCCCEEEE-SCCSCTTSHHHHHHHHHHHHTCC-------EEEEC-SSST-------TSEETTEECCSSTTTCSS-
T ss_pred HHHHhCCCEEEEE-CcCCCCCChHHHHHHHHHHCCCE-------EEEeC-Cccc-------ccccCCeeccCCHHHcCC-
Confidence 46786 9999999 543 2 288999999873 89999 8663 258999999999999864
Q ss_pred CCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCc
Q 007327 76 HPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGA 146 (608)
Q Consensus 76 ~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~ 146 (608)
++|+++|++|+.. +++++++|.++|+|.+++.++.+ ++++.++|+++|+|++||||+|+++|..
T Consensus 70 --~~Dlvii~vp~~~-v~~v~~~~~~~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~igpnc~g~~~~~~ 133 (145)
T 2duw_A 70 --KVDMVDVFRNSEA-AWGVAQEAIAIGAKTLWLQLGVI----NEQAAVLAREAGLSVVMDRCPAIELPRL 133 (145)
T ss_dssp --CCSEEECCSCSTH-HHHHHHHHHHHTCCEEECCTTCC----CHHHHHHHHTTTCEEECSCCHHHHSTTT
T ss_pred --CCCEEEEEeCHHH-HHHHHHHHHHcCCCEEEEcCChH----HHHHHHHHHHcCCEEEcCCeeeEEcccc
Confidence 4899999999864 88888989889999988887666 6789999999999999999999999986
No 31
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=99.79 E-value=5.5e-20 Score=171.11 Aligned_cols=116 Identities=10% Similarity=0.077 Sum_probs=98.0
Q ss_pred CCCCC-CCcEEEEEcCC---c----hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhc
Q 007327 4 GQLFS-KTTQALFYNYK---Q----LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAA 75 (608)
Q Consensus 4 ~~l~~-p~s~avv~g~~---~----~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~ 75 (608)
+.||+ |+++||| |++ + +++++|+++||. |++|| |.+ +++.|++||+|++|++.
T Consensus 16 ~~ll~~p~~iaVV-Gas~~~g~~G~~~~~~l~~~G~~-------v~~Vn-p~~---------~~i~G~~~y~sl~~l~~- 76 (144)
T 2d59_A 16 REILTRYKKIALV-GASPKPERDANIVMKYLLEHGYD-------VYPVN-PKY---------EEVLGRKCYPSVLDIPD- 76 (144)
T ss_dssp HHHHHHCCEEEEE-TCCSCTTSHHHHHHHHHHHTTCE-------EEEEC-TTC---------SEETTEECBSSGGGCSS-
T ss_pred HHHHcCCCEEEEE-ccCCCCCchHHHHHHHHHHCCCE-------EEEEC-CCC---------CeECCeeccCCHHHcCC-
Confidence 46886 9999999 554 2 388999999873 89998 864 38999999999999864
Q ss_pred CCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccC
Q 007327 76 HPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAG 145 (608)
Q Consensus 76 ~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~ 145 (608)
++|+++|++|+.. +.+++++|.++|+|.++ +++|+. ++++.++|+++|+|++||||+|+++|.
T Consensus 77 --~vDlvvi~vp~~~-~~~vv~~~~~~gi~~i~-~~~g~~---~~~l~~~a~~~Gi~vvGpnc~gv~~~~ 139 (144)
T 2d59_A 77 --KIEVVDLFVKPKL-TMEYVEQAIKKGAKVVW-FQYNTY---NREASKKADEAGLIIVANRCMMREHER 139 (144)
T ss_dssp --CCSEEEECSCHHH-HHHHHHHHHHHTCSEEE-ECTTCC---CHHHHHHHHHTTCEEEESCCHHHHHHH
T ss_pred --CCCEEEEEeCHHH-HHHHHHHHHHcCCCEEE-ECCCch---HHHHHHHHHHcCCEEEcCCchhhcchh
Confidence 4899999999975 78888999999999775 566664 689999999999999999999999874
No 32
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=98.04 E-value=1.1e-05 Score=82.74 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=83.9
Q ss_pred cEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCC--CC-ccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 11 TQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGA--EG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 11 s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~--~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
.+++|.|++|+ +++.+.+.. +.++++++..++. .| +..++.|-.-.|+|+|.+++++.. ++|++|
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~-----~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~---~aDVvI 93 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRK-----DVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS---NTEGIL 93 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCS-----SEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT---SCSEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCC-----CCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc---CCCEEE
Confidence 34444476666 666666543 4568888774321 12 344444544578999999999875 479999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc-ccc
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 141 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc-~Gi 141 (608)
.+.++.. ..+.++.|.++|++ +|+-|.||.+...++|.+.|++.++ ++.||. +|+
T Consensus 94 DFT~p~a-~~~~~~~~l~~Gv~-vViGTTG~~~e~~~~L~~aa~~~~~-~~a~N~SiGv 149 (288)
T 3ijp_A 94 DFSQPQA-SVLYANYAAQKSLI-HIIGTTGFSKTEEAQIADFAKYTTI-VKSGNMSLGV 149 (288)
T ss_dssp ECSCHHH-HHHHHHHHHHHTCE-EEECCCCCCHHHHHHHHHHHTTSEE-EECSCCCHHH
T ss_pred EcCCHHH-HHHHHHHHHHcCCC-EEEECCCCCHHHHHHHHHHhCcCCE-EEECCCcHHH
Confidence 9988875 56677778878986 5566889999888899999987554 888884 454
No 33
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.81 E-value=3.6e-05 Score=78.49 Aligned_cols=119 Identities=21% Similarity=0.285 Sum_probs=82.8
Q ss_pred CcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCC--CC-ccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGA--EG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~--~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
..|+|+ |++|+ +++.+.+.. +.++++.++.++. .| +..++.|..- |+++|.+++++.. ++|++
T Consensus 8 ikV~V~-Ga~G~MG~~i~~~l~~~~-----~~eLv~~~d~~~~~~~G~d~gel~g~~~-gv~v~~dl~~ll~---~~DVV 77 (272)
T 4f3y_A 8 MKIAIA-GASGRMGRMLIEAVLAAP-----DATLVGALDRTGSPQLGQDAGAFLGKQT-GVALTDDIERVCA---EADYL 77 (272)
T ss_dssp EEEEES-STTSHHHHHHHHHHHHCT-----TEEEEEEBCCTTCTTTTSBTTTTTTCCC-SCBCBCCHHHHHH---HCSEE
T ss_pred cEEEEE-CCCCHHHHHHHHHHHhCC-----CCEEEEEEEecCcccccccHHHHhCCCC-CceecCCHHHHhc---CCCEE
Confidence 345655 65555 666666653 4467777763221 12 3333334333 8999999999876 37999
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc-ccc
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 141 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc-~Gi 141 (608)
|.+.++.. ....++.|.++|++ +|+-|.||.+...++|.+.|++.++ ++.||. +|+
T Consensus 78 IDfT~p~a-~~~~~~~al~~G~~-vVigTTG~s~~~~~~L~~aa~~~~v-v~a~N~s~Gv 134 (272)
T 4f3y_A 78 IDFTLPEG-TLVHLDAALRHDVK-LVIGTTGFSEPQKAQLRAAGEKIAL-VFSANMSVGV 134 (272)
T ss_dssp EECSCHHH-HHHHHHHHHHHTCE-EEECCCCCCHHHHHHHHHHTTTSEE-EECSCCCHHH
T ss_pred EEcCCHHH-HHHHHHHHHHcCCC-EEEECCCCCHHHHHHHHHHhccCCE-EEECCCCHHH
Confidence 99998875 66777888888987 5566899999888899999987554 888984 454
No 34
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.70 E-value=4.3e-05 Score=77.93 Aligned_cols=122 Identities=20% Similarity=0.199 Sum_probs=81.7
Q ss_pred CCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCC---CCccccccCceeecccccCCHHHHhhcCCCccE
Q 007327 9 KTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGA---EGFQKLFFGQEEIAIPVHSTVEAACAAHPMADV 81 (608)
Q Consensus 9 p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~---~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDl 81 (608)
++.|+|+ |++|+ +++.+.+.. |.++++.+..+.. +.+..++.|-.-.|+++|.+++++.. ++|+
T Consensus 5 ~mkV~V~-Ga~G~mG~~~~~~~~~~~-----~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~---~~Dv 75 (273)
T 1dih_A 5 NIRVAIA-GAGGRMGRQLIQAALALE-----GVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD---DFDV 75 (273)
T ss_dssp BEEEEET-TTTSHHHHHHHHHHHHST-----TEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT---SCSE
T ss_pred CcEEEEE-CCCCHHHHHHHHHHHhCC-----CCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc---CCCE
Confidence 4566666 76555 666665442 4456777763321 11222233323357888988888764 4899
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCC-ccccc
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA-TVGGI 142 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPN-c~Gi~ 142 (608)
+|.+.++.. ....++.|.++|++ +|+-|.||.+.+.++|.+.+++.+ .++.|| ++|+.
T Consensus 76 VIDft~p~~-~~~~~~~a~~~G~~-vVigTtG~~~e~~~~L~~~a~~~~-vv~a~N~siGvn 134 (273)
T 1dih_A 76 FIDFTRPEG-TLNHLAFCRQHGKG-MVIGTTGFDEAGKQAIRDAAADIA-IVFAANFSVGVN 134 (273)
T ss_dssp EEECSCHHH-HHHHHHHHHHTTCE-EEECCCCCCHHHHHHHHHHTTTSC-EEECSCCCHHHH
T ss_pred EEEcCChHH-HHHHHHHHHhCCCC-EEEECCCCCHHHHHHHHHhcCCCC-EEEEecCcHHHH
Confidence 997777765 67778888889988 555577999988888888887655 688898 67764
No 35
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=97.64 E-value=9.8e-05 Score=79.20 Aligned_cols=123 Identities=17% Similarity=0.193 Sum_probs=96.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
..|+|++++-||+++...+|.+...|...+.++.+|+.+. .-.+.+.++.+.+||++++|++.+=.++.+....++.+.
T Consensus 246 l~g~I~ii~Ng~Gl~~~t~D~i~~~G~~~aN~lD~gG~a~-~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~ 324 (397)
T 3ufx_B 246 LDGNIGIIGNGAGLVMYTLDLVNRVGGKPANFLDIGGGAK-ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVI 324 (397)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBSEEEECCSCCC-HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHH
T ss_pred CCCcEEEEecCccHHHHHHHHHHHcCCCcCCcEecCCCCC-HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHH
Confidence 5799999999999999999999999999999999999873 346888889999999999999866645666665555443
Q ss_pred h----CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHH
Q 007327 246 Q----GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKE 312 (608)
Q Consensus 246 ~----a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~ 312 (608)
+ ...+||||+.-.|.+. +.-...+++.|+...+++++-...+..
T Consensus 325 ~a~~~~~~~kPvvv~~~G~~~-----------------------~~~~~~l~~~gip~~~~~e~Aa~~~~~ 372 (397)
T 3ufx_B 325 RALEEGLLTKPVVMRVAGTAE-----------------------EEAKKLLEGKPVYMYPTSIEAAKVTVA 372 (397)
T ss_dssp HHHTTTCCCSCEEEEEEEECH-----------------------HHHHHHTTTSSEEECSSHHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEEccCCCH-----------------------HHHHHHHHhCCCcccCCHHHHHHHHHH
Confidence 3 2347999998887532 233357788898888888876655543
No 36
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=97.58 E-value=0.00066 Score=74.10 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=95.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCce---------------------eEEeecCCCCCCCCCHHHHHHHhhcCCCcc
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGI---------------------YEGIAIGGDVFPGSTLSDHILRFNNIPQVK 224 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~---------------------s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~ 224 (608)
+-++|+++|.||+++...+|.+.+.|+-+ ...+.+|.++. .-.+.+.++-+.+||+++
T Consensus 292 ~g~rvaiitngGG~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlDl~g~a~-~~~~~~al~~~l~dp~vd 370 (457)
T 2csu_A 292 RGNKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASAR-GEDYYRTAKLLLQDPNVD 370 (457)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCC-HHHHHHHHHHHHHSTTCS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCeeCCCCCC-HHHHHHHHHHHhcCCCCC
Confidence 56789999999999999999999998874 34566665541 123678899999999999
Q ss_pred EEEEEEecC----Cc-c--HHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC
Q 007327 225 MMVVLGELG----GR-D--EYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA 297 (608)
Q Consensus 225 ~I~ly~E~g----~~-~--~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv 297 (608)
+|++.+-++ .. + .+.+.++++++..+|||++...+.+.. +.....|+++|+
T Consensus 371 ~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~----------------------~~~~~~L~~~Gi 428 (457)
T 2csu_A 371 MLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVS----------------------EKAKELLEKNGI 428 (457)
T ss_dssp EEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTT----------------------HHHHHHHHTTTC
T ss_pred EEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcch----------------------HHHHHHHHhCCC
Confidence 999987422 21 1 356788887765679999965443221 334567899999
Q ss_pred cccCCHHHHHHHHHHHHH
Q 007327 298 VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 298 i~v~~~~el~~~~~~~~~ 315 (608)
...+++++-..++..+..
T Consensus 429 p~~~spe~Av~al~~l~~ 446 (457)
T 2csu_A 429 PTYERPEDVASAAYALVE 446 (457)
T ss_dssp CEESSHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHH
Confidence 999999998888776654
No 37
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=97.28 E-value=0.0017 Score=69.56 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=95.2
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHH----HH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYS----LV 241 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~----f~ 241 (608)
..|+|++++.+|+++...+|.+...|.-...++.+|+.+. .-.+.+.++.+.+||++++|++.+=.|+.+-.. ..
T Consensus 262 l~G~Ig~~~nGaGlam~t~D~i~~~Gg~paNflDvgG~a~-~e~~~~al~~il~d~~v~~ilvni~ggi~~~d~vA~gii 340 (395)
T 2fp4_B 262 LDGNIACFVNGAGLAMATCDIIFLNGGKPANFLDLGGGVK-ESQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGIT 340 (395)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSSCC-HHHHHHHHHHHHHCTTCCEEEEEEEESSSCHHHHHHHHH
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcEEECCCCC-HHHHHHHHHHHhCCCCCCEEEEEecCCccCcHHHHHHHH
Confidence 4799999999999999999999999988999999999872 344577899999999999999866436665444 45
Q ss_pred HHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCccc--CCHHHHHHHHHHH
Q 007327 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKET 313 (608)
Q Consensus 242 ~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v--~~~~el~~~~~~~ 313 (608)
+++++...+||||+-..|.+. +.-...|++.|+-.. +|++|-...+.++
T Consensus 341 ~a~~~~~~~~Pivvrl~G~n~-----------------------~~g~~~L~~~gl~~~~~~~~~~Aa~~~v~~ 391 (395)
T 2fp4_B 341 KACRELELKVPLVVRLEGTNV-----------------------HEAQNILTNSGLPITSAVDLEDAAKKAVAS 391 (395)
T ss_dssp HHHHHHTCCSCEEEEEEETTH-----------------------HHHHHHHHHTCSCCEECSSHHHHHHHHHHT
T ss_pred HHHHhcCCCCeEEEEcCCCCH-----------------------HHHHHHHHHCCCceEeCCCHHHHHHHHHHH
Confidence 566665568999997666543 334478888887666 7777766555433
No 38
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=97.25 E-value=0.0026 Score=67.88 Aligned_cols=124 Identities=16% Similarity=0.171 Sum_probs=94.7
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHH----HHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEY----SLV 241 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~----~f~ 241 (608)
..|+|++++.+|+++...+|.+...|.-...++.+|+.+. .-.+.+.++.+..||++|+|++.+=.|+.+-. ...
T Consensus 255 l~G~Ig~~~nGaGl~m~t~D~i~~~Gg~~aNflD~gG~a~-~~~~~~~~~~il~d~~v~~ilvni~ggi~~~~~vA~gii 333 (388)
T 2nu8_B 255 LDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGAT-KERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGII 333 (388)
T ss_dssp CSSSEEEEESSHHHHHHHHHHHHHTTCCBCEEEECCSCCC-HHHHHHHHHHHHTSTTCCEEEEEEESCSSCHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhhhhHHHHHcCCCcCceeEecCCCC-HHHHHHHHHHHhcCCCCCEEEEEecCCcCCchHHHHHHH
Confidence 4899999999999999999999999988999999999872 34557788889999999999997753566543 345
Q ss_pred HHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCccc--CCHHHHHHHHHHH
Q 007327 242 EALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVP--TSYEAFESAIKET 313 (608)
Q Consensus 242 ~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v--~~~~el~~~~~~~ 313 (608)
+++++...+||||+-..|.+. +.-...+++.|+-.. +|+++-...+.++
T Consensus 334 ~a~~~~~~~~pivvrl~G~n~-----------------------~~g~~~l~~~g~~~~~~~~~~~aa~~~v~~ 384 (388)
T 2nu8_B 334 GAVAEVGVNVPVVVRLEGNNA-----------------------ELGAKKLADSGLNIIAAKGLTDAAQQVVAA 384 (388)
T ss_dssp HHHHHHTCCSCEEEEEESTTH-----------------------HHHHHHHHTTCSSEEECSSHHHHHHHHHHH
T ss_pred HHHHhcCCCCeEEEEeCCCCH-----------------------HHHHHHHHHCCCceecCCCHHHHHHHHHHH
Confidence 566665578999996666543 334467888887666 7777766554433
No 39
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.15 E-value=0.00062 Score=68.16 Aligned_cols=105 Identities=13% Similarity=0.060 Sum_probs=73.3
Q ss_pred CcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+.|+|+ |+ |+ +++.+.+.+ + ++++.++ +... +-.|+|+|.+++++. ++|++|.+
T Consensus 4 mkI~Vi-Ga-GrMG~~i~~~l~~~~-----~-eLva~~d-~~~~---------~~~gv~v~~dl~~l~----~~DVvIDf 61 (243)
T 3qy9_A 4 MKILLI-GY-GAMNQRVARLAEEKG-----H-EIVGVIE-NTPK---------ATTPYQQYQHIADVK----GADVAIDF 61 (243)
T ss_dssp CEEEEE-CC-SHHHHHHHHHHHHTT-----C-EEEEEEC-SSCC-----------CCSCBCSCTTTCT----TCSEEEEC
T ss_pred eEEEEE-Cc-CHHHHHHHHHHHhCC-----C-EEEEEEe-cCcc---------ccCCCceeCCHHHHh----CCCEEEEe
Confidence 467777 55 55 666666654 4 5777777 4222 346899999999864 37999877
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc-ccc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 141 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc-~Gi 141 (608)
..+.. +...++ .++|++. |+-|.||.+...++|.+.|++.++ ++-||. +|+
T Consensus 62 t~p~a-~~~~~~--l~~g~~v-VigTTG~s~e~~~~l~~aa~~~~v-~~a~N~S~Gv 113 (243)
T 3qy9_A 62 SNPNL-LFPLLD--EDFHLPL-VVATTGEKEKLLNKLDELSQNMPV-FFSANMSYGV 113 (243)
T ss_dssp SCHHH-HHHHHT--SCCCCCE-EECCCSSHHHHHHHHHHHTTTSEE-EECSSCCHHH
T ss_pred CChHH-HHHHHH--HhcCCce-EeCCCCCCHHHHHHHHHHHhcCCE-EEECCccHHH
Confidence 77765 455556 4578775 566889998888899999988555 888884 454
No 40
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=96.82 E-value=0.05 Score=59.45 Aligned_cols=129 Identities=21% Similarity=0.193 Sum_probs=86.1
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCcee----------------EE-------eecCCCCCCCCC----HHHHHHHhh
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIY----------------EG-------IAIGGDVFPGST----LSDHILRFN 218 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s----------------~~-------vs~Gn~~~~dv~----~~d~l~~l~ 218 (608)
+-.+|++||-||+++....+.+.+ |+++. .. .|.||-. |+. +.+.++-+.
T Consensus 248 ~G~rvaivtn~Gg~gvlaaD~~~~-gl~l~~ls~~t~~~l~~~~~~~l~~~lp~~~s~~NPv--D~~d~~~~~~al~~~l 324 (480)
T 3dmy_A 248 SSGFICGLYTGGTLAAEAAGLLAG-HLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPH--PMIDPTLRNQLIADLG 324 (480)
T ss_dssp SCCEEEEEESCHHHHHHHHHHHHH-HTTCC---CCGGGEEEEETTEEEEETTSHHHHTTSCC--TTTCCHHHHHHHHHGG
T ss_pred CCCeEEEEECCHHHHHHHHHHHHh-CCCCCCCCHHHHhhhhhhhhccHHHhCcchhhccCCc--CCCCHHHHHHHHHHHh
Confidence 445699999999999999999887 66543 22 2456666 543 678899999
Q ss_pred cCCCccEEEE-EE--ecCCccH-HHHHHHHHhCC----CCCC--EEEEEeCCCccCcccccccCCCCCcCCCCcchHHHH
Q 007327 219 NIPQVKMMVV-LG--ELGGRDE-YSLVEALKQGK----VNKP--VVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAK 288 (608)
Q Consensus 219 ~Dp~T~~I~l-y~--E~g~~~~-~~f~~~~r~a~----~~KP--Vvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~ 288 (608)
+||++.+|++ |+ -....++ ...++++.++. .+|| ++++-.|..... + . .+..
T Consensus 325 ~D~~vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~--~-------------~---~~~~ 386 (480)
T 3dmy_A 325 AKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDP--Q-------------C---RSQQ 386 (480)
T ss_dssp GCTTEEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTST--T-------------C---HHHH
T ss_pred cCCCCCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccch--h-------------h---HHHH
Confidence 9999998877 23 1123455 56666554432 2799 444544543111 0 0 0234
Q ss_pred HHHHHHcCCcccCCHHHHHHHHHHHHH
Q 007327 289 NQALRDAGAVVPTSYEAFESAIKETFE 315 (608)
Q Consensus 289 ~a~~~qaGvi~v~~~~el~~~~~~~~~ 315 (608)
...|+++||...+++++-..++..+..
T Consensus 387 ~~~L~~aGIp~f~spe~Av~a~~~l~~ 413 (480)
T 3dmy_A 387 IATLEDAGIAVVSSLPEATLLAAALIH 413 (480)
T ss_dssp HHHHHHTTCEECSSHHHHHHHHHHHTS
T ss_pred HHHHHhCCCcccCCHHHHHHHHHHHHh
Confidence 468999999999999998877766653
No 41
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.78 E-value=0.0089 Score=59.77 Aligned_cols=101 Identities=15% Similarity=0.231 Sum_probs=69.1
Q ss_pred cEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 11 TQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 11 s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.|+|+ |++|+ +++.+.+.. +.++++.+. ++ .+++++... ++|++|-+.
T Consensus 2 kV~V~-Ga~G~mG~~i~~~~~~~~-----~~elva~~d-~~-------------------~dl~~~~~~--~~DvvIDfT 53 (245)
T 1p9l_A 2 RVGVL-GAKGKVGTTMVRAVAAAD-----DLTLSAELD-AG-------------------DPLSLLTDG--NTEVVIDFT 53 (245)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHCT-----TCEEEEEEC-TT-------------------CCTHHHHHT--TCCEEEECS
T ss_pred EEEEE-CCCCHHHHHHHHHHHhCC-----CCEEEEEEc-cC-------------------CCHHHHhcc--CCcEEEEcc
Confidence 46667 65555 666665442 344666655 21 235554432 379999888
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhC-CCe-EEcCC-cccc
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN-NKV-VIGPA-TVGG 141 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~-g~r-vlGPN-c~Gi 141 (608)
++.. ....++.|.++|++. ||-|.||.+...++|.+.|+++ ++. ++.|| ++|+
T Consensus 54 ~p~a-~~~~~~~a~~~g~~~-VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv 109 (245)
T 1p9l_A 54 HPDV-VMGNLEFLIDNGIHA-VVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGA 109 (245)
T ss_dssp CTTT-HHHHHHHHHHTTCEE-EECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHH
T ss_pred ChHH-HHHHHHHHHHcCCCE-EEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHH
Confidence 8875 677888888889874 5558899998888999999976 775 88898 4454
No 42
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.68 E-value=0.0058 Score=63.47 Aligned_cols=111 Identities=15% Similarity=0.038 Sum_probs=73.9
Q ss_pred CCCcEEEEEcCC--c--hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 8 SKTTQALFYNYK--Q--LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 8 ~p~s~avv~g~~--~--~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
+|..++||| .+ + .+++.+.+.. +.++++.++ +.. +-.|+++|.++++++...+++|+++
T Consensus 24 ~~~rvgiiG-~G~ig~~~~~~~l~~~~-----~~~lvav~d-~~~----------~~~g~~~~~~~~~ll~~~~~vD~V~ 86 (330)
T 4ew6_A 24 SPINLAIVG-VGKIVRDQHLPSIAKNA-----NFKLVATAS-RHG----------TVEGVNSYTTIEAMLDAEPSIDAVS 86 (330)
T ss_dssp CCEEEEEEC-CSHHHHHTHHHHHHHCT-----TEEEEEEEC-SSC----------CCTTSEEESSHHHHHHHCTTCCEEE
T ss_pred CCceEEEEe-cCHHHHHHHHHHHHhCC-----CeEEEEEEe-CCh----------hhcCCCccCCHHHHHhCCCCCCEEE
Confidence 455788885 33 2 3777777753 344665555 432 3468899999999987523699999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
|++|.....+.+++++ ++| |.+++=- -.....+.++|.+.|+++|+. .+|.|
T Consensus 87 i~tp~~~H~~~~~~al-~aG-khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 140 (330)
T 4ew6_A 87 LCMPPQYRYEAAYKAL-VAG-KHVFLEKPPGATLSEVADLEALANKQGASLFASWH 140 (330)
T ss_dssp ECSCHHHHHHHHHHHH-HTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred EeCCcHHHHHHHHHHH-HcC-CcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEeh
Confidence 9999987555555555 478 4455421 134445778899999999985 44544
No 43
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.58 E-value=0.011 Score=61.11 Aligned_cols=119 Identities=18% Similarity=0.070 Sum_probs=72.7
Q ss_pred CCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~~p~vDlavi 84 (608)
++..++||| | ++.++++.+.+.+ +.++++.++ +.... ...+ .+-.|++ +|.+.+++... +++|+++|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~-----~~~~~av~d-~~~~~-~~~~--a~~~~~~~~~~~~~~ll~~-~~~D~V~i 73 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAG-----NGEVVAVSS-RTLES-AQAF--ANKYHLPKAYDKLEDMLAD-ESIDVIYV 73 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHC-----SEEEEEEEC-SCSST-TCC-----CCCCSCEESCHHHHHTC-TTCCEEEE
T ss_pred CceEEEEEechHHHHHHHHHHHhCC-----CcEEEEEEc-CCHHH-HHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEE
Confidence 355788885 3 2233777776653 224555555 42221 1111 1335676 89999998764 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|.....+.+.+++ ++|. .+++= .-.....+.++|.+.|+++|+. .+|.|.
T Consensus 74 ~tp~~~h~~~~~~al-~aGk-~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~ 127 (329)
T 3evn_A 74 ATINQDHYKVAKAAL-LAGK-HVLVEKPFTLTYDQANELFALAESCNLFLMEAQKS 127 (329)
T ss_dssp CSCGGGHHHHHHHHH-HTTC-EEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCcHHHHHHHHHHH-HCCC-eEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcc
Confidence 999987555555544 4785 44442 2244555778999999999986 455543
No 44
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.48 E-value=0.0043 Score=64.83 Aligned_cols=118 Identities=14% Similarity=0.005 Sum_probs=75.2
Q ss_pred CCcEEEEE-cCCc-hHHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 9 KTTQALFY-NYKQ-LPIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 9 p~s~avv~-g~~~-~~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+..++||| |..| .+++.+.+. . +.++++.++ +.... ...+ .+-.|++.|.+++|+.... ++|+++|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~-----~~~lvav~d-~~~~~-~~~~--~~~~~~~~~~~~~~ll~~~-~~D~V~i~ 82 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHAD-----RAELIDVCD-IDPAA-LKAA--VERTGARGHASLTDMLAQT-DADIVILT 82 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTT-----TEEEEEEEC-SSHHH-HHHH--HHHHCCEEESCHHHHHHHC-CCSEEEEC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCC-----CeEEEEEEc-CCHHH-HHHH--HHHcCCceeCCHHHHhcCC-CCCEEEEC
Confidence 45788885 3233 377888876 2 334666665 52221 0001 1235789999999988643 69999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE-EcCCc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPAT 138 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv-lGPNc 138 (608)
+|.....+.+.+++ ++| |.+++-- -.......++|.+.|+++|..+ +|.|.
T Consensus 83 tp~~~h~~~~~~al-~~g-k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~ 135 (354)
T 3q2i_A 83 TPSGLHPTQSIECS-EAG-FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQN 135 (354)
T ss_dssp SCGGGHHHHHHHHH-HTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCcHHHHHHHHHHH-HCC-CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcc
Confidence 99987555555555 477 4455422 2445557789999999999864 56553
No 45
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.48 E-value=0.012 Score=60.23 Aligned_cols=117 Identities=13% Similarity=0.038 Sum_probs=73.9
Q ss_pred CCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+|..++||| | ++..+++.+.+.. +.++++.++ +... ....+. ++ ++.|.+.+++.... ++|+++|+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~-----~~~~v~v~d-~~~~-~~~~~~-~~---~~~~~~~~~~l~~~-~~D~V~i~ 76 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP-----GAALVRLAS-SNPD-NLALVP-PG---CVIESDWRSVVSAP-EVEAVIIA 76 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT-----TEEEEEEEE-SCHH-HHTTCC-TT---CEEESSTHHHHTCT-TCCEEEEE
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC-----CcEEEEEEe-CCHH-HHHHHH-hh---CcccCCHHHHhhCC-CCCEEEEe
Confidence 345788886 3 3334888888753 334566666 4221 011111 12 57899999987532 58999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+|+....+.+ ++|.++|. .+++- .-.......++|.+.|+++|+. .+|.|.
T Consensus 77 tp~~~h~~~~-~~al~~Gk-~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 129 (315)
T 3c1a_A 77 TPPATHAEIT-LAAIASGK-AVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQ 129 (315)
T ss_dssp SCGGGHHHHH-HHHHHTTC-EEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CChHHHHHHH-HHHHHCCC-cEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 9998644444 44444774 45543 2345556778899999999976 566654
No 46
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.45 E-value=0.0033 Score=65.64 Aligned_cols=119 Identities=9% Similarity=0.019 Sum_probs=76.1
Q ss_pred CCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
.|..++||| | ++..+++.+.+.. +.++++.++ +.... ...+ .+-.|++.|.+++|+.... ++|+++|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~-----~~~lvav~d-~~~~~-~~~~--~~~~g~~~~~~~~~~l~~~-~~D~V~i~ 73 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSE-----KLKLVTCYS-RTEDK-REKF--GKRYNCAGDATMEALLARE-DVEMVIIT 73 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS-----SEEEEEEEC-SSHHH-HHHH--HHHHTCCCCSSHHHHHHCS-SCCEEEEC
T ss_pred CcceEEEEccCHHHHHHHHHHHhCC-----CcEEEEEEC-CCHHH-HHHH--HHHcCCCCcCCHHHHhcCC-CCCEEEEe
Confidence 456789885 2 2233778887762 334565555 42220 0001 1235889999999988533 69999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+|.....+.+.+++ ++|. .+++- .-.......++|.+.|+++|+. .+|.|.
T Consensus 74 tp~~~h~~~~~~al-~~gk-~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~ 126 (354)
T 3db2_A 74 VPNDKHAEVIEQCA-RSGK-HIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSS 126 (354)
T ss_dssp SCTTSHHHHHHHHH-HTTC-EEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGG
T ss_pred CChHHHHHHHHHHH-HcCC-EEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeech
Confidence 99987555555555 4784 45543 2355666788999999999986 555554
No 47
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.44 E-value=0.0074 Score=63.01 Aligned_cols=116 Identities=15% Similarity=0.074 Sum_probs=74.6
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+|..++||| |..++ +++.+.+.. +.++++.++ +.... .. .+..|.++|.++++++.. +++|+++|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~-----~~~l~av~d-~~~~~-~~----~~~~~~~~~~~~~~ll~~-~~vD~V~i 73 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTP-----GLELAGVSS-SDASK-VH----ADWPAIPVVSDPQMLFND-PSIDLIVI 73 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTST-----TEEEEEEEC-SCHHH-HH----TTCSSCCEESCHHHHHHC-SSCCEEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCC-----CcEEEEEEC-CCHHH-HH----hhCCCCceECCHHHHhcC-CCCCEEEE
Confidence 456788885 22232 566676653 334665555 42221 00 234578999999999875 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
++|.....+.+++++. +| |.+++=-- .......++|.+.|+++|+.+ +|-|
T Consensus 74 ~tp~~~H~~~~~~al~-aG-khV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (352)
T 3kux_A 74 PTPNDTHFPLAQSALA-AG-KHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHN 126 (352)
T ss_dssp CSCTTTHHHHHHHHHH-TT-CEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCG
T ss_pred eCChHHHHHHHHHHHH-CC-CcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEee
Confidence 9999875555555554 78 45555222 445557789999999999864 4444
No 48
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.42 E-value=0.0094 Score=60.81 Aligned_cols=114 Identities=12% Similarity=-0.046 Sum_probs=70.3
Q ss_pred CCCcEEEEEcCC--c-hHHHHHhhCc-ccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 8 SKTTQALFYNYK--Q-LPIQRMLDFD-FLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 8 ~p~s~avv~g~~--~-~~~~~l~~~~-~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
+|..++||| .+ | .+++.+.... .. +..+++.++ +... .+-.|++ |.|++|++.. +++|+++
T Consensus 6 ~~~rvgiIG-~G~iG~~~~~~l~~~~~~~---~~~lvav~d-~~~~--------a~~~g~~-~~~~~ell~~-~~vD~V~ 70 (294)
T 1lc0_A 6 GKFGVVVVG-VGRAGSVRLRDLKDPRSAA---FLNLIGFVS-RREL--------GSLDEVR-QISLEDALRS-QEIDVAY 70 (294)
T ss_dssp CSEEEEEEC-CSHHHHHHHHHHTSHHHHT---TEEEEEEEC-SSCC--------CEETTEE-BCCHHHHHHC-SSEEEEE
T ss_pred CcceEEEEE-EcHHHHHHHHHHhccccCC---CEEEEEEEC-chHH--------HHHcCCC-CCCHHHHhcC-CCCCEEE
Confidence 456788884 33 3 3677766510 00 223444443 3221 1345666 6899998764 3699999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
|++|.....+.+++++. +|. .+++=- -.....+.++|.+.|+++|+. .+|++.
T Consensus 71 i~tp~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~ 125 (294)
T 1lc0_A 71 ICSESSSHEDYIRQFLQ-AGK-HVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVE 125 (294)
T ss_dssp ECSCGGGHHHHHHHHHH-TTC-EEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred EeCCcHhHHHHHHHHHH-CCC-cEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhH
Confidence 99999875555655554 775 455421 233444678999999999986 566654
No 49
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.37 E-value=0.0054 Score=64.03 Aligned_cols=115 Identities=7% Similarity=-0.019 Sum_probs=71.8
Q ss_pred CcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEEE
Q 007327 10 TTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 10 ~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~e--v~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
..++||| |..++ +++.+.+.. +.++++.++ +.+.. .+ .++ +.|.+.|.+++|++.. +++|+++|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~---~~-a~~~~~~~~~~~~~~~~ll~~-~~~D~V~i 71 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRE-----TLEVKTIFD-LHVNE---KA-AAPFKEKGVNFTADLNELLTD-PEIELITI 71 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCT-----TEEEEEEEC-TTCCH---HH-HHHHHTTTCEEESCTHHHHSC-TTCCEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHhhCC-----CeEEEEEEC-CCHHH---HH-HHhhCCCCCeEECCHHHHhcC-CCCCEEEE
Confidence 4688884 22232 566666542 334666665 54221 11 001 1578999999998874 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
++|.....+.+++++. +| |.+++=-- .....+.++|.+.|+++|+.+ +|.|
T Consensus 72 ~tp~~~h~~~~~~al~-aG-k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (349)
T 3i23_A 72 CTPAHTHYDLAKQAIL-AG-KSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQN 124 (349)
T ss_dssp CSCGGGHHHHHHHHHH-TT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred eCCcHHHHHHHHHHHH-cC-CEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 9999875555555554 78 55555211 334457789999999999864 4544
No 50
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.35 E-value=0.0064 Score=59.88 Aligned_cols=110 Identities=13% Similarity=0.127 Sum_probs=71.6
Q ss_pred cEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEeccC
Q 007327 11 TQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 88 (608)
Q Consensus 11 s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp~ 88 (608)
.+++|| |..|+ +.+++.+.+| ++++..+ +...- ++ .|.+++++.. +++|++++++|+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d-~~~~~-------~~-----~~~~~~~l~~--~~~DvVv~~~~~ 60 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF------EIAAILD-VRGEH-------EK-----MVRGIDEFLQ--REMDVAVEAASQ 60 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEEEC-SSCCC-------TT-----EESSHHHHTT--SCCSEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCC------EEEEEEe-cCcch-------hh-----hcCCHHHHhc--CCCCEEEECCCH
Confidence 578885 22233 7777776544 3556665 42210 11 7899999863 258999999999
Q ss_pred hhcHHHHHHHhcCCCCCEEEEecCCCCH-HHH-HHHHHHHHhCCCe-EEcCCcccccc
Q 007327 89 RSAAASSMAALKQPTIRVVAIIAEGVPE-ADT-KQLIAYARSNNKV-VIGPATVGGIQ 143 (608)
Q Consensus 89 ~~~~~~~le~~~~~gv~~~viis~Gf~e-~~~-~~l~~~a~~~g~r-vlGPNc~Gi~~ 143 (608)
... .+....+.++|. .+++.+.+... ... ++|.+.++++|.. ++-||+.|-++
T Consensus 61 ~~~-~~~~~~~l~~G~-~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~ 116 (236)
T 2dc1_A 61 QAV-KDYAEKILKAGI-DLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLD 116 (236)
T ss_dssp HHH-HHHHHHHHHTTC-EEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHH
T ss_pred HHH-HHHHHHHHHCCC-cEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChH
Confidence 864 444555555776 46666665533 233 7899999999988 67888877553
No 51
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.26 E-value=0.0059 Score=64.06 Aligned_cols=118 Identities=14% Similarity=0.037 Sum_probs=74.5
Q ss_pred CCCcEEEEE-cCCc-hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-NYKQ-LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g~~~-~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
++..++||| |..| .+++.+.+.. +.++++.++ +... .... .+-.|+++|.|++++... +++|+++|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~-----~~~l~av~d-~~~~-~~~~---a~~~g~~~~~~~~~ll~~-~~~D~V~i~ 72 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAAD-----NLEVHGVFD-ILAE-KREA---AAQKGLKIYESYEAVLAD-EKVDAVLIA 72 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTST-----TEEEEEEEC-SSHH-HHHH---HHTTTCCBCSCHHHHHHC-TTCCEEEEC
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCC-----CcEEEEEEc-CCHH-HHHH---HHhcCCceeCCHHHHhcC-CCCCEEEEc
Confidence 345788885 2222 3777777653 334555555 4222 1110 123578999999998864 369999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE-EcCCc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPAT 138 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv-lGPNc 138 (608)
+|.....+.+.+++. +| |.+++-- -.....+.++|.+.|+++|+.+ +|-|.
T Consensus 73 tp~~~h~~~~~~al~-aG-khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 125 (359)
T 3e18_A 73 TPNDSHKELAISALE-AG-KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNR 125 (359)
T ss_dssp SCGGGHHHHHHHHHH-TT-CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred CCcHHHHHHHHHHHH-CC-CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeee
Confidence 999875555555554 78 4455421 2345557789999999999864 45443
No 52
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=96.24 E-value=0.023 Score=58.53 Aligned_cols=117 Identities=14% Similarity=-0.072 Sum_probs=73.8
Q ss_pred CCcEEEEEcCC---c-hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhh-------cCC
Q 007327 9 KTTQALFYNYK---Q-LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA-------AHP 77 (608)
Q Consensus 9 p~s~avv~g~~---~-~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~-------~~p 77 (608)
+..++||| .+ + ++++.+.+.+ .++++.++ +.... ..+ .+...+.++|.+++++.. ..+
T Consensus 3 mirvgiIG-~gG~i~~~h~~~l~~~~------~~lvav~d-~~~~~--~~~-~~~~~~~~~~~~~~~ll~~~~~l~~~~~ 71 (312)
T 3o9z_A 3 MTRFALTG-LAGYIAPRHLKAIKEVG------GVLVASLD-PATNV--GLV-DSFFPEAEFFTEPEAFEAYLEDLRDRGE 71 (312)
T ss_dssp CCEEEEEC-TTSSSHHHHHHHHHHTT------CEEEEEEC-SSCCC--GGG-GGTCTTCEEESCHHHHHHHHHHHHHTTC
T ss_pred ceEEEEEC-CChHHHHHHHHHHHhCC------CEEEEEEc-CCHHH--HHH-HhhCCCCceeCCHHHHHHHhhhhcccCC
Confidence 45788884 43 3 3788887764 34676666 53321 111 123346889999999861 224
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE-EcCCc
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPAT 138 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv-lGPNc 138 (608)
++|+++|++|...-.+-+.+++ ++|. .+++=- -.......++|.+.|+++|..+ +|-|.
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al-~aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 132 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMAL-RLGA-NALSEKPLVLWPEEIARLKELEARTGRRVYTVLQL 132 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHH-HTTC-EEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred CCcEEEECCCchhhHHHHHHHH-HCCC-eEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeeh
Confidence 7999999999987555555555 4784 444411 1334457789999999999864 55543
No 53
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.19 E-value=0.0073 Score=64.01 Aligned_cols=117 Identities=15% Similarity=0.156 Sum_probs=75.4
Q ss_pred CCcEEEEEcCC---ch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 9 KTTQALFYNYK---QL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 9 p~s~avv~g~~---~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
|..++|| |.+ ++ +++.+.+.. +.++++.++ +.... ...+ .+-.|++.|.|++|++... ++|+++|
T Consensus 2 ~~rigii-G~G~~~~~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--a~~~g~~~~~~~~ell~~~-~vD~V~i 70 (387)
T 3moi_A 2 KIRFGIC-GLGFAGSVLMAPAMRHHP-----DAQIVAACD-PNEDV-RERF--GKEYGIPVFATLAEMMQHV-QMDAVYI 70 (387)
T ss_dssp CEEEEEE-CCSHHHHTTHHHHHHHCT-----TEEEEEEEC-SCHHH-HHHH--HHHHTCCEESSHHHHHHHS-CCSEEEE
T ss_pred ceEEEEE-eCCHHHHHHHHHHHHhCC-----CeEEEEEEe-CCHHH-HHHH--HHHcCCCeECCHHHHHcCC-CCCEEEE
Confidence 4578888 544 22 778887753 334666665 53210 0001 1234889999999998753 6999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|.....+.+++++. +| |.+++-- -.......++|.+.|+++|+. .+|.|.
T Consensus 71 ~tp~~~H~~~~~~al~-aG-k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~ 124 (387)
T 3moi_A 71 ASPHQFHCEHVVQASE-QG-LHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSR 124 (387)
T ss_dssp CSCGGGHHHHHHHHHH-TT-CEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCG
T ss_pred cCCcHHHHHHHHHHHH-CC-CceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEecc
Confidence 9999875555555554 78 4455422 134455778999999999986 456553
No 54
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.19 E-value=0.0092 Score=62.55 Aligned_cols=117 Identities=9% Similarity=-0.027 Sum_probs=74.3
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++..++||| |..++ +++.+.+.. +.++++.++ +.... ..++..+.++|.+++|++.. +++|+++|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-----~~~~~~~~~~~~~~~~ll~~-~~vD~V~i 71 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNP-----HFELYKIVE-RSKEL-----SKERYPQASIVRSFKELTED-PEIDLIVV 71 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCT-----TEEEEEEEC-SSCCG-----GGTTCTTSEEESCSHHHHTC-TTCCEEEE
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCC-----CeEEEEEEc-CCHHH-----HHHhCCCCceECCHHHHhcC-CCCCEEEE
Confidence 355788884 22232 566666653 334666555 53321 11233478999999998874 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE-EcCCc
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPAT 138 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv-lGPNc 138 (608)
++|.....+.+++++. +|. .+++= .-.....+.++|.+.|+++|+.+ +|.|.
T Consensus 72 ~tp~~~H~~~~~~al~-aGk-hVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 125 (362)
T 3fhl_A 72 NTPDNTHYEYAGMALE-AGK-NVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNR 125 (362)
T ss_dssp CSCGGGHHHHHHHHHH-TTC-EEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred eCChHHHHHHHHHHHH-CCC-eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 9999875555555554 784 45542 12345557789999999999864 45553
No 55
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.14 E-value=0.0092 Score=61.75 Aligned_cols=119 Identities=11% Similarity=0.056 Sum_probs=74.1
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~-~~y~sv~~i~~~~p~vDlavi 84 (608)
++..++||| |..|+ +++.+.+.. +.++++.++ +.... ...+ .+-.|+ ++|.+++++.... ++|+++|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--~~~~~~~~~~~~~~~ll~~~-~~D~V~i 73 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESA-----QAEVRGIAS-RRLEN-AQKM--AKELAIPVAYGSYEELCKDE-TIDIIYI 73 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSS-----SEEEEEEBC-SSSHH-HHHH--HHHTTCCCCBSSHHHHHHCT-TCSEEEE
T ss_pred CeEEEEEECchHHHHHHHHHHHhCC-----CcEEEEEEe-CCHHH-HHHH--HHHcCCCceeCCHHHHhcCC-CCCEEEE
Confidence 355788885 32333 778887753 334554444 43221 0111 123466 5899999987643 6999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|.....+.+.+ |.++|.. +++- .-.......++|.+.|+++|+. .+|.|.
T Consensus 74 ~tp~~~h~~~~~~-al~~gk~-vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 127 (330)
T 3e9m_A 74 PTYNQGHYSAAKL-ALSQGKP-VLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKS 127 (330)
T ss_dssp CCCGGGHHHHHHH-HHHTTCC-EEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSG
T ss_pred cCCCHHHHHHHHH-HHHCCCe-EEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhh
Confidence 9999875555555 4457854 4442 2245555778999999999986 456554
No 56
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=96.12 E-value=0.029 Score=57.84 Aligned_cols=116 Identities=12% Similarity=-0.092 Sum_probs=73.6
Q ss_pred CcEEEEEcCCc----hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhh--------cCC
Q 007327 10 TTQALFYNYKQ----LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA--------AHP 77 (608)
Q Consensus 10 ~s~avv~g~~~----~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~--------~~p 77 (608)
..++|| |.+| ++++.+.+.+ .++++.++ +.... ..+ .....+.++|.+.+++.. ..+
T Consensus 4 irvgiI-G~gG~i~~~h~~~l~~~~------~~lvav~d-~~~~~--~~~-~~~~~~~~~~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 4 KNFALI-GAAGYIAPRHMRAIKDTG------NCLVSAYD-INDSV--GII-DSISPQSEFFTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CEEEEE-TTTSSSHHHHHHHHHHTT------CEEEEEEC-SSCCC--GGG-GGTCTTCEEESSHHHHHHHHHHHTTSTTT
T ss_pred eEEEEE-CCCcHHHHHHHHHHHhCC------CEEEEEEc-CCHHH--HHH-HhhCCCCcEECCHHHHHHhhhhhhhccCC
Confidence 467888 5432 3788887764 34666665 53321 111 123347889999999863 124
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|+++|++|...-.+-+++++. +|. .+++=- -.......++|.+.|+++|.. .+|.|.
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 133 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLR-LGC-DVICEKPLVPTPEMLDQLAVIERETDKRLYNILQL 133 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHH-TTC-EEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred CCcEEEECCCcHHHHHHHHHHHH-CCC-eEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhh
Confidence 69999999999875555555554 784 444411 134445778999999999986 466553
No 57
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.07 E-value=0.0051 Score=63.94 Aligned_cols=118 Identities=11% Similarity=-0.027 Sum_probs=73.9
Q ss_pred CCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
+..++||| | ++..+++.+.+.. +.++++.++ +.... ...+ .+-.|.++|.+++++.... ++|+++|++
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--a~~~g~~~~~~~~~~l~~~-~~D~V~i~t 73 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANP-----DLELVVIAD-PFIEG-AQRL--AEANGAEAVASPDEVFARD-DIDGIVIGS 73 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT-----TEEEEEEEC-SSHHH-HHHH--HHTTTCEEESSHHHHTTCS-CCCEEEECS
T ss_pred ceEEEEECCcHHHHHHHHHHHhCC-----CcEEEEEEC-CCHHH-HHHH--HHHcCCceeCCHHHHhcCC-CCCEEEEeC
Confidence 45788885 2 2223777777753 334565555 42220 0000 1234688999999987643 699999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
|.....+.+.+ |.++|.. +++-- -.......++|.+.|+++|+. .+|.|.
T Consensus 74 p~~~h~~~~~~-al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~ 125 (344)
T 3euw_A 74 PTSTHVDLITR-AVERGIP-ALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNR 125 (344)
T ss_dssp CGGGHHHHHHH-HHHTTCC-EEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGG
T ss_pred CchhhHHHHHH-HHHcCCc-EEEECCCCCCHHHHHHHHHHHHhcCCeEEecchh
Confidence 99875555555 4457854 44432 255666788999999999975 455443
No 58
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.02 E-value=0.0073 Score=62.39 Aligned_cols=115 Identities=9% Similarity=0.013 Sum_probs=72.1
Q ss_pred CcEEEEE-cC-CchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NY-KQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~-~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
..++||| |. +..+++.+.+.. +.++++.++ +.... ...+ .+-.|++ |.+++|+... +++|+++|++|
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--~~~~~~~-~~~~~~~l~~-~~~D~V~i~tp 72 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNA-----DARLVAVAD-AFPAA-AEAI--AGAYGCE-VRTIDAIEAA-ADIDAVVICTP 72 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCT-----TEEEEEEEC-SSHHH-HHHH--HHHTTCE-ECCHHHHHHC-TTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHhhCC-----CcEEEEEEC-CCHHH-HHHH--HHHhCCC-cCCHHHHhcC-CCCCEEEEeCC
Confidence 4688885 22 223777777753 334565555 42220 0001 1235778 9999998764 36999999999
Q ss_pred ChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 88 FRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 88 ~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
.....+.+.+ |.++| |.+++- .-.......++|.+.|+++|+. .+|.|
T Consensus 73 ~~~h~~~~~~-al~~g-k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~ 122 (331)
T 4hkt_A 73 TDTHADLIER-FARAG-KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFN 122 (331)
T ss_dssp GGGHHHHHHH-HHHTT-CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred chhHHHHHHH-HHHcC-CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccc
Confidence 9875555555 44477 445543 2255666788999999999986 44444
No 59
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.01 E-value=0.0085 Score=62.82 Aligned_cols=118 Identities=18% Similarity=0.087 Sum_probs=73.7
Q ss_pred CCCcEEEEE-cC-CchHHHHHh-hCcccCCCCCCcEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEE
Q 007327 8 SKTTQALFY-NY-KQLPIQRML-DFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 8 ~p~s~avv~-g~-~~~~~~~l~-~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G--~~~y~sv~~i~~~~p~vDla 82 (608)
.+..++||| |. +..+++.+. +.. +.++++.++ +.... ...+ .+-.| .+.|.++++++... ++|++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~-----~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~ll~~~-~~D~V 91 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVS-----GVEVVAVCD-IVAGR-AQAA--LDKYAIEAKDYNDYHDLINDK-DVEVV 91 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCT-----TEEEEEEEC-SSTTH-HHHH--HHHHTCCCEEESSHHHHHHCT-TCCEE
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCC-----CcEEEEEEe-CCHHH-HHHH--HHHhCCCCeeeCCHHHHhcCC-CCCEE
Confidence 345788885 22 223777777 432 334565555 53321 0111 12234 68999999988643 69999
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE--EcCC
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV--IGPA 137 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv--lGPN 137 (608)
+|++|.....+.+++++ ++| |.+++-- -.....+.++|.+.|+++|.++ +|-|
T Consensus 92 ~i~tp~~~h~~~~~~al-~aG-k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~ 147 (357)
T 3ec7_A 92 IITASNEAHADVAVAAL-NAN-KYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFM 147 (357)
T ss_dssp EECSCGGGHHHHHHHHH-HTT-CEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECG
T ss_pred EEcCCcHHHHHHHHHHH-HCC-CCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeec
Confidence 99999987555555544 578 4555432 2445557789999999999875 4544
No 60
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.01 E-value=0.015 Score=56.80 Aligned_cols=89 Identities=12% Similarity=0.023 Sum_probs=59.6
Q ss_pred cEEEEEcCCchHHHHHhhC-cccCCCCCCcEEEEeC-CC-CCCccccccCc-eeecccccCCHHHHh---hcCCCccEEE
Q 007327 11 TQALFYNYKQLPIQRMLDF-DFLCGRETPSVAGIIN-PG-AEGFQKLFFGQ-EEIAIPVHSTVEAAC---AAHPMADVFI 83 (608)
Q Consensus 11 s~avv~g~~~~~~~~l~~~-~~~~~~g~~~v~~v~~-p~-~~~~~~~~~g~-ev~G~~~y~sv~~i~---~~~p~vDlav 83 (608)
.++|| |+ |+.-+.+.++ .+. ..|..+|+.++- |. +. |. .+.|+|+|+ ++|++ .+. ++|.++
T Consensus 86 ~V~Iv-Ga-G~lG~aLa~~~~~~-~~g~~iVg~~D~dp~~ki-------G~~~i~GvpV~~-~~dL~~~v~~~-~Id~vI 153 (212)
T 3keo_A 86 NVMLV-GC-GNIGRALLHYRFHD-RNKMQISMAFDLDSNDLV-------GKTTEDGIPVYG-ISTINDHLIDS-DIETAI 153 (212)
T ss_dssp EEEEE-CC-SHHHHHHTTCCCCT-TSSEEEEEEEECTTSTTT-------TCBCTTCCBEEE-GGGHHHHC-CC-SCCEEE
T ss_pred EEEEE-Cc-CHHHHHHHHhhhcc-cCCeEEEEEEeCCchhcc-------CceeECCeEEeC-HHHHHHHHHHc-CCCEEE
Confidence 45556 66 3344455554 121 224557877761 33 32 45 688999985 55543 334 499999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEecC
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~viis~ 112 (608)
|++|... ...+.+.|.+.||+++.-||.
T Consensus 154 IAvPs~~-aq~v~d~lv~~GIk~I~nFap 181 (212)
T 3keo_A 154 LTVPSTE-AQEVADILVKAGIKGILSFSP 181 (212)
T ss_dssp ECSCGGG-HHHHHHHHHHHTCCEEEECSS
T ss_pred EecCchh-HHHHHHHHHHcCCCEEEEcCC
Confidence 9999975 678999999999999999885
No 61
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.01 E-value=0.011 Score=61.21 Aligned_cols=110 Identities=7% Similarity=-0.070 Sum_probs=68.9
Q ss_pred CCCcEEEEEcCC--ch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFYNYK--QL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~g~~--~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++..++|+| .+ |+ +++.+.+.+ +.++++.++ +....+ + + .|+++|.+++++.+ ++|++++
T Consensus 2 ~~irV~IiG-~G~mG~~~~~~l~~~~-----~~elvav~d-~~~~~~---~-~---~gv~~~~d~~~ll~---~~DvVii 64 (320)
T 1f06_A 2 TNIRVAIVG-YGNLGRSVEKLIAKQP-----DMDLVGIFS-RRATLD---T-K---TPVFDVADVDKHAD---DVDVLFL 64 (320)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTTCS-----SEEEEEEEE-SSSCCS---S-S---SCEEEGGGGGGTTT---TCSEEEE
T ss_pred CCCEEEEEe-ecHHHHHHHHHHhcCC-----CCEEEEEEc-CCHHHh---h-c---CCCceeCCHHHHhc---CCCEEEE
Confidence 355788885 32 22 777777653 345677666 532211 1 1 57888999988752 5899999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHH-HHHHHHHHhCCC-eEEcC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADT-KQLIAYARSNNK-VVIGP 136 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~-~~l~~~a~~~g~-rvlGP 136 (608)
++|+....+.+.+++ ++|.+ +++-+ .+...... ++|.+.|++++. .+++.
T Consensus 65 atp~~~h~~~~~~al-~aG~~-Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~ 117 (320)
T 1f06_A 65 CMGSATDIPEQAPKF-AQFAC-TVDTYDNHRDIPRHRQVMNEAATAAGNVALVST 117 (320)
T ss_dssp CSCTTTHHHHHHHHH-TTTSE-EECCCCCGGGHHHHHHHHHHHHHHHTCEEECSC
T ss_pred cCCcHHHHHHHHHHH-HCCCE-EEECCCCcCCHHHHHHHHHHHHHhCCCEEEEec
Confidence 999976455555555 47765 33333 34444444 789999998774 44444
No 62
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.97 E-value=0.01 Score=61.68 Aligned_cols=117 Identities=15% Similarity=0.014 Sum_probs=71.4
Q ss_pred CCcEEEEE-cCCch--HHHHH-hhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 9 KTTQALFY-NYKQL--PIQRM-LDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 9 p~s~avv~-g~~~~--~~~~l-~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
|..++||| |..|+ +++++ .... +.++++.++ +.... ... ..+..|.++|.|++|++.. +++|+++|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~-----~~~l~av~d-~~~~~-~~~--~~~~~~~~~~~~~~~ll~~-~~~D~V~i 71 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKD-----SWHVAHIFR-RHAKP-EEQ--APIYSHIHFTSDLDEVLND-PDVKLVVV 71 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTT-----TEEEEEEEC-SSCCG-GGG--SGGGTTCEEESCTHHHHTC-TTEEEEEE
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCC-----CeEEEEEEc-CCHhH-HHH--HHhcCCCceECCHHHHhcC-CCCCEEEE
Confidence 45688885 22232 45523 3322 334666665 53221 111 1234578999999998864 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
++|.....+.+.+++ ++| |.+++-- -.......++|.+.|+++|+.+ +|-|
T Consensus 72 ~tp~~~h~~~~~~al-~aG-k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (345)
T 3f4l_A 72 CTHADSHFEYAKRAL-EAG-KNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQN 124 (345)
T ss_dssp CSCGGGHHHHHHHHH-HTT-CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCG
T ss_pred cCChHHHHHHHHHHH-HcC-CcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 999987555555555 478 4455421 1344557788999999999864 4444
No 63
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.96 E-value=0.02 Score=58.78 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=68.8
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+|..++||| |..|+ +++.+.+.. +.++++.++ +.... ...+ .+-.|++.|.+.+++ .. ++|+++|
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~-----~~~lvav~d-~~~~~-~~~~--~~~~g~~~~~~~~~l-~~--~~D~V~i 71 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAAS-----DWTLQGAWS-PTRAK-ALPI--CESWRIPYADSLSSL-AA--SCDAVFV 71 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCS-----SEEEEEEEC-SSCTT-HHHH--HHHHTCCBCSSHHHH-HT--TCSEEEE
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-----CeEEEEEEC-CCHHH-HHHH--HHHcCCCccCcHHHh-hc--CCCEEEE
Confidence 456788885 22232 566666542 334565555 43221 0011 123477899999886 32 5899999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|.....+.+.++ .++|. .+++- .......+.++|.+.|+++|+.+
T Consensus 72 ~tp~~~h~~~~~~a-l~~G~-~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 72 HSSTASHFDVVSTL-LNAGV-HVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp CSCTTHHHHHHHHH-HHTTC-EEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred eCCchhHHHHHHHH-HHcCC-eEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 99997655555544 44775 44443 33555667789999999999874
No 64
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.93 E-value=0.01 Score=62.38 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=72.8
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+|..++||| |..|+ +++.+.+.. +.++++.++ +.... . .....|.++|.+++|++.. +++|+++|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-~----~~~~~~~~~~~~~~~ll~~-~~~D~V~i 73 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVP-----GLNLAFVAS-RDEEK-V----KRDLPDVTVIASPEAAVQH-PDVDLVVI 73 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTST-----TEEEEEEEC-SCHHH-H----HHHCTTSEEESCHHHHHTC-TTCSEEEE
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCC-----CeEEEEEEc-CCHHH-H----HhhCCCCcEECCHHHHhcC-CCCCEEEE
Confidence 345788885 22233 566666652 334565555 42221 0 0234578999999998864 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
++|.....+.+++++. +|. .+++--- .......++|.+.|+++|+.+ +|.|
T Consensus 74 ~tp~~~H~~~~~~al~-aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 126 (364)
T 3e82_A 74 ASPNATHAPLARLALN-AGK-HVVVDKPFTLDMQEARELIALAEEKQRLLSVFHN 126 (364)
T ss_dssp CSCGGGHHHHHHHHHH-TTC-EEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred eCChHHHHHHHHHHHH-CCC-cEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEee
Confidence 9999875555555554 784 4444221 344557789999999999874 4544
No 65
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=95.92 E-value=0.017 Score=60.46 Aligned_cols=119 Identities=18% Similarity=0.103 Sum_probs=73.3
Q ss_pred CCCcEEEEE-cC-Cch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NY-KQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~-~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++..++||| |. +.+ +++.+.+.. +.++++.++ +.... ... ..++..+.++|.+++|++... ++|+++|
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~-~a~~~~~~~~~~~~~~ll~~~-~vD~V~i 74 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQ-----DIRIVAACD-SDLER-ARR-VHRFISDIPVLDNVPAMLNQV-PLDAVVM 74 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCT-----TEEEEEEEC-SSHHH-HGG-GGGTSCSCCEESSHHHHHHHS-CCSEEEE
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-----CcEEEEEEc-CCHHH-HHH-HHHhcCCCcccCCHHHHhcCC-CCCEEEE
Confidence 356788885 22 222 677777653 334565555 52211 011 112334678999999988753 6899999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
++|.....+.+++++ ++|.. ++|= .-.....+.++|.+.|+++|+. .+|-|
T Consensus 75 ~tp~~~H~~~~~~al-~aGkh-Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 127 (359)
T 3m2t_A 75 AGPPQLHFEMGLLAM-SKGVN-VFVEKPPCATLEELETLIDAARRSDVVSGVGMN 127 (359)
T ss_dssp CSCHHHHHHHHHHHH-HTTCE-EEECSCSCSSHHHHHHHHHHHHHHTCCEEECCH
T ss_pred cCCcHHHHHHHHHHH-HCCCe-EEEECCCcCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 999987555555554 47854 4431 1134445678899999999875 45544
No 66
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.88 E-value=0.028 Score=58.05 Aligned_cols=115 Identities=9% Similarity=0.004 Sum_probs=70.3
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+|..++||| |..+. .++.+..-+ .++++.++ +.... ...+ .++..+.+.|.+++|++.. +++|+++|
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~------~~lvav~d-~~~~~-~~~~-a~~~~~~~~~~~~~~ll~~-~~~D~V~i 72 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAG------AELAGVFE-SDSDN-RAKF-TSLFPSVPFAASAEQLITD-ASIDLIAC 72 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTT------CEEEEEEC-SCTTS-CHHH-HHHSTTCCBCSCHHHHHTC-TTCCEEEE
T ss_pred CccEEEEECCChHHHHHhhhhhcCCC------cEEEEEeC-CCHHH-HHHH-HHhcCCCcccCCHHHHhhC-CCCCEEEE
Confidence 467899995 22232 455554333 34566655 43221 0111 1122267899999998764 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++|.....+.+++++. +|. .+++- .-.....+.++|.+.|+++|+.+.
T Consensus 73 ~tp~~~h~~~~~~al~-aGk-hVl~EKP~a~~~~e~~~l~~~a~~~g~~~~ 121 (336)
T 2p2s_A 73 AVIPCDRAELALRTLD-AGK-DFFTAKPPLTTLEQLDAVQRRVAETGRKFA 121 (336)
T ss_dssp CSCGGGHHHHHHHHHH-TTC-EEEECSSCCSCHHHHHHHHHHHHHHCCCEE
T ss_pred eCChhhHHHHHHHHHH-CCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 9999875666666555 775 44442 123444567899999999998654
No 67
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=95.88 E-value=0.026 Score=58.40 Aligned_cols=118 Identities=9% Similarity=0.061 Sum_probs=71.3
Q ss_pred CCCcEEEEE-cCCch-HHHHHh-hCcccCCCCCCcEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEE
Q 007327 8 SKTTQALFY-NYKQL-PIQRML-DFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~-~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~-~~y~sv~~i~~~~p~vDlav 83 (608)
++..++||| |..|+ +++.+. +.. +.++++.++ +... ....+ .+-.|. ++|.+++++.... ++|+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~-----~~~~vav~d-~~~~-~~~~~--a~~~g~~~~~~~~~~~l~~~-~~D~V~ 76 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQ-----GVKLVAACA-LDSN-QLEWA--KNELGVETTYTNYKDMIDTE-NIDAIF 76 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCS-----SEEEEEEEC-SCHH-HHHHH--HHTTCCSEEESCHHHHHTTS-CCSEEE
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCC-----CcEEEEEec-CCHH-HHHHH--HHHhCCCcccCCHHHHhcCC-CCCEEE
Confidence 455788885 33333 777777 432 334565555 4221 00000 012355 6899999987532 589999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhC-CCeE-EcCC
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSN-NKVV-IGPA 137 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~-g~rv-lGPN 137 (608)
|++|.....+.+++++. +| |.+++- .-.......++|.+.|+++ |+.+ +|.|
T Consensus 77 i~tp~~~h~~~~~~al~-~G-~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~ 131 (346)
T 3cea_A 77 IVAPTPFHPEMTIYAMN-AG-LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFM 131 (346)
T ss_dssp ECSCGGGHHHHHHHHHH-TT-CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCG
T ss_pred EeCChHhHHHHHHHHHH-CC-CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecc
Confidence 99999875555555554 77 445542 1234455677899999999 9875 4554
No 68
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.87 E-value=0.013 Score=60.04 Aligned_cols=120 Identities=9% Similarity=-0.066 Sum_probs=74.9
Q ss_pred CccCCCCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCC
Q 007327 1 MATGQLFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 1 ~~~~~l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~ 78 (608)
|.+..-...++|+||| |..|. +.++|.+.||. |...+ .... ....+ .-.|...+.|+.|+.. +
T Consensus 1 m~m~~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~-------V~~~d-r~~~-~~~~~---~~~g~~~~~~~~e~~~---~ 65 (306)
T 3l6d_A 1 MSLSDESFEFDVSVIGLGAMGTIMAQVLLKQGKR-------VAIWN-RSPG-KAAAL---VAAGAHLCESVKAALS---A 65 (306)
T ss_dssp -CCCCCCCSCSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSHH-HHHHH---HHHTCEECSSHHHHHH---H
T ss_pred CCCCcccCCCeEEEECCCHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHH---HHCCCeecCCHHHHHh---c
Confidence 4455556678899995 33333 88899998764 55555 4221 00001 0136778899999876 3
Q ss_pred ccEEEEeccChhcHHHHHH--HhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 79 ADVFINFSSFRSAAASSMA--ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le--~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
.|+++++||....+..+++ .+....-..+||-++.......+++.+.+++.|++++.
T Consensus 66 aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vd 124 (306)
T 3l6d_A 66 SPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVK 124 (306)
T ss_dssp SSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 7999999998765666654 22211223455556666656677788888888887654
No 69
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.83 E-value=0.011 Score=61.38 Aligned_cols=118 Identities=10% Similarity=0.022 Sum_probs=72.8
Q ss_pred CCCcEEEEEcCC---ch-HHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccE
Q 007327 8 SKTTQALFYNYK---QL-PIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADV 81 (608)
Q Consensus 8 ~p~s~avv~g~~---~~-~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~-~~y~sv~~i~~~~p~vDl 81 (608)
+|..++|| |.+ ++ +++.+.+. . +.++++.++ +.... ...+ .+-.|+ ++|.+++|++... ++|+
T Consensus 17 ~~irvgiI-G~G~~~g~~~~~~l~~~~~-----~~~lvav~d-~~~~~-~~~~--a~~~~~~~~~~~~~~ll~~~-~vD~ 85 (340)
T 1zh8_A 17 RKIRLGIV-GCGIAARELHLPALKNLSH-----LFEITAVTS-RTRSH-AEEF--AKMVGNPAVFDSYEELLESG-LVDA 85 (340)
T ss_dssp CCEEEEEE-CCSHHHHHTHHHHHHTTTT-----TEEEEEEEC-SSHHH-HHHH--HHHHSSCEEESCHHHHHHSS-CCSE
T ss_pred CceeEEEE-ecCHHHHHHHHHHHHhCCC-----ceEEEEEEc-CCHHH-HHHH--HHHhCCCcccCCHHHHhcCC-CCCE
Confidence 34578888 444 33 77777765 2 234565555 42210 0001 122455 7899999988643 6999
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|++|.....+.+++++ ++|. .+++=- -.....+.++|.+.|+++|.. .+|-|.
T Consensus 86 V~i~tp~~~H~~~~~~al-~aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 142 (340)
T 1zh8_A 86 VDLTLPVELNLPFIEKAL-RKGV-HVICEKPISTDVETGKKVVELSEKSEKTVYIAENF 142 (340)
T ss_dssp EEECCCGGGHHHHHHHHH-HTTC-EEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGG
T ss_pred EEEeCCchHHHHHHHHHH-HCCC-cEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 999999986555555555 4784 555522 133445678999999999976 445443
No 70
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.82 E-value=0.0099 Score=61.75 Aligned_cols=117 Identities=11% Similarity=0.069 Sum_probs=73.1
Q ss_pred CcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEec
Q 007327 10 TTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~~p~vDlavi~v 86 (608)
..++||| | ++..+++.+.+.. +.++++.++ +.... ...+ .+-.|++ +|.+++++... +++|+++|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--~~~~~~~~~~~~~~~ll~~-~~~D~V~i~t 72 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMID-----DAILYAISD-VREDR-LREM--KEKLGVEKAYKDPHELIED-PNVDAVLVCS 72 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGST-----TEEEEEEEC-SCHHH-HHHH--HHHHTCSEEESSHHHHHHC-TTCCEEEECS
T ss_pred eEEEEEcCCHHHHHHHHHHHhCC-----CcEEEEEEC-CCHHH-HHHH--HHHhCCCceeCCHHHHhcC-CCCCEEEEcC
Confidence 4688885 2 2223777777753 334565555 42221 0001 1234664 89999998764 3699999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
|.....+.+++++ ++|. .+++-- -.......++|.+.|+++|+. .+|-|.
T Consensus 73 p~~~h~~~~~~al-~~gk-~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~ 124 (344)
T 3ezy_A 73 STNTHSELVIACA-KAKK-HVFCEKPLSLNLADVDRMIEETKKADVILFTGFNR 124 (344)
T ss_dssp CGGGHHHHHHHHH-HTTC-EEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred CCcchHHHHHHHH-hcCC-eEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecc
Confidence 9987555555544 4784 455533 256666788999999999975 455543
No 71
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.78 E-value=0.0083 Score=63.63 Aligned_cols=114 Identities=12% Similarity=0.096 Sum_probs=67.8
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
|-.++||| |+ |+ .++.+.+.. .+.++++.++ +... +...+ .+-.|+|+|.|++++++ ++|+++|++
T Consensus 7 ~~rv~VvG~G~-g~~h~~a~~~~~----~~~elvav~~-~~~~-~a~~~--a~~~gv~~~~~~~~l~~---~~D~v~i~~ 74 (372)
T 4gmf_A 7 KQRVLIVGAKF-GEMYLNAFMQPP----EGLELVGLLA-QGSA-RSREL--AHAFGIPLYTSPEQITG---MPDIACIVV 74 (372)
T ss_dssp CEEEEEECSTT-THHHHHTTSSCC----TTEEEEEEEC-CSSH-HHHHH--HHHTTCCEESSGGGCCS---CCSEEEECC
T ss_pred CCEEEEEehHH-HHHHHHHHHhCC----CCeEEEEEEC-CCHH-HHHHH--HHHhCCCEECCHHHHhc---CCCEEEEEC
Confidence 44677776 45 44 666666542 1234665555 5332 11111 23468999999999865 589999999
Q ss_pred cChhcH---HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe-EEcC
Q 007327 87 SFRSAA---ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV-VIGP 136 (608)
Q Consensus 87 p~~~~~---~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r-vlGP 136 (608)
|...-. .++.++|-++|.. +++==- +...+.++|++.|+++|+. .+|-
T Consensus 75 p~~~h~~~~~~~a~~al~aGkh-Vl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~ 126 (372)
T 4gmf_A 75 RSTVAGGAGTQLARHFLARGVH-VIQEHP-LHPDDISSLQTLAQEQGCCYWINT 126 (372)
T ss_dssp C--CTTSHHHHHHHHHHHTTCE-EEEESC-CCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCcccchhHHHHHHHHHHcCCc-EEEecC-CCHHHHHHHHHHHHHcCCEEEEcC
Confidence 986421 2334444447764 444211 3344678999999999987 4554
No 72
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.69 E-value=0.02 Score=59.70 Aligned_cols=116 Identities=13% Similarity=-0.077 Sum_probs=73.0
Q ss_pred CCcEEEEE-c-CCc-hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 9 KTTQALFY-N-YKQ-LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 9 p~s~avv~-g-~~~-~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+..++||| | ++. .+++.+.+.. +.++++.++ +.... ...+ .+-.|++.|.+++|+... +++|+++|+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--a~~~g~~~~~~~~~ll~~-~~~D~V~i~ 96 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEP-----LTEVTAIAS-RRWDR-AKRF--TERFGGEPVEGYPALLER-DDVDAVYVP 96 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCT-----TEEEEEEEE-SSHHH-HHHH--HHHHCSEEEESHHHHHTC-TTCSEEEEC
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCC-----CeEEEEEEc-CCHHH-HHHH--HHHcCCCCcCCHHHHhcC-CCCCEEEEC
Confidence 45688885 2 222 2677777763 334565555 42210 0001 123588999999998764 369999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE-EcC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGP 136 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv-lGP 136 (608)
+|.....+.+.+++ ++|.. +++= .-.....+.++|.+.|+++|+.+ +|-
T Consensus 97 tp~~~h~~~~~~al-~aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 97 LPAVLHAEWIDRAL-RAGKH-VLAEKPLTTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp CCGGGHHHHHHHHH-HTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcHHHHHHHHHHH-HCCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 99987555555544 47854 4442 22455567889999999999864 443
No 73
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.68 E-value=0.027 Score=59.10 Aligned_cols=120 Identities=9% Similarity=-0.028 Sum_probs=71.0
Q ss_pred CCCCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 6 LFSKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
+.+|..++||| |..+. .++.+..- +.++++.++ +.... ...+ .++..+.++|.+++|++.. +++|++
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d-~~~~~-a~~~-a~~~~~~~~~~~~~~ll~~-~~vD~V 92 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHE-KDDAL-AAEF-SAVYADARRIATAEEILED-ENIGLI 92 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHHHT------TCEEEEEEC-SCHHH-HHHH-HHHSSSCCEESCHHHHHTC-TTCCEE
T ss_pred hccCcEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEc-CCHHH-HHHH-HHHcCCCcccCCHHHHhcC-CCCCEE
Confidence 44566899995 22232 44444443 345666665 53220 0000 1122236899999998874 369999
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
+|++|...-.+.+++++. +|. .+++= .-.......++|.+.|+++|+.+ +|-|
T Consensus 93 ~I~tp~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~ 147 (361)
T 3u3x_A 93 VSAAVSSERAELAIRAMQ-HGK-DVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYS 147 (361)
T ss_dssp EECCCHHHHHHHHHHHHH-TTC-EEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECH
T ss_pred EEeCChHHHHHHHHHHHH-CCC-eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 999999875555555554 784 44442 11344456789999999999864 5554
No 74
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=95.67 E-value=0.032 Score=59.11 Aligned_cols=108 Identities=12% Similarity=0.086 Sum_probs=73.3
Q ss_pred CcchhhhheeccCC--CCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g--~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.| ..+.||||++.||.++. +|+++.|+||+|+-|++++.+.+..-|. .|..-|.. +..+.
T Consensus 13 gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~-~feev~yLLl~G~lPt~~el~~f~~~l~---~~~~lp~~--~~~~~ 86 (375)
T 3tqg_A 13 GQSAGETSIATVGKEGHGLTYRGYRIEDLAANA-TFEEVAYLLLKNKLPTKSELDAYTKKLV---NLRSLPPA--LKDTL 86 (375)
T ss_dssp ---CCEESSEEECTTSCCEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHH
T ss_pred CCeEeeeeceEEeCCCCEEEECCeeHHHHHhcC-CHHHHHHHHHcCcCcCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 44556677776654 56999999999999888 9999999999999998888888887664 45444444 23444
Q ss_pred ccC--CCChHHHHHHhhhccC---CCCc--CccHHHHHHHHHH
Q 007327 427 ARA--GKDLVSSLVSGLLTIG---PRFG--GAIDDAARYFKDA 462 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~G---p~hG--Ga~~~a~~~l~~~ 462 (608)
.+- .++|-..+.+++++++ |... ...+.+++++.++
T Consensus 87 ~~~p~~~hpM~~l~~~v~aL~~~~~~~~~~~~~~~a~~LiAk~ 129 (375)
T 3tqg_A 87 ERIPASSHPMDVMRTGCSMLGNLEPENGFENEQNIADRLVAIF 129 (375)
T ss_dssp HTSCTTSCHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHH
T ss_pred HhCCCCCChHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 443 4677777777777763 3321 2234566666654
No 75
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=95.66 E-value=0.046 Score=59.01 Aligned_cols=91 Identities=14% Similarity=0.075 Sum_probs=64.3
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|.||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+.|++++.+.++..|. .|..-+.. +..+.
T Consensus 56 g~~~~~S~Is~idg~~G~L~YRGy~I~dLa~~~-~feEvayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--v~~~~ 129 (436)
T 2h12_A 56 ETAACNSKITFIDGDKGVLLHRGYPIAQLAENA-SYEEVIYLLLNGELPNKAQYDTFTNTLT---NHTLLHEQ--IRNFF 129 (436)
T ss_dssp TEEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCSCCGG--GHHHH
T ss_pred CCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---hccCCCHH--HHHHH
Confidence 445567777777655 5799999999999998 9999999999999999888888887655 44433333 22233
Q ss_pred c--cCCCChHHHHHHhhhccC
Q 007327 427 A--RAGKDLVSSLVSGLLTIG 445 (608)
Q Consensus 427 a--St~a~~~~av~agl~a~G 445 (608)
. -..++|-..+.+++++++
T Consensus 130 ~~~p~~~hPM~~l~~~v~aL~ 150 (436)
T 2h12_A 130 NGFRRDAHPMAILCGTVGALS 150 (436)
T ss_dssp TTSCTTCCHHHHHHHHHHHHG
T ss_pred HhCCCCCCHHHHHHHHHHHHh
Confidence 2 233566666666666653
No 76
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.63 E-value=0.019 Score=60.01 Aligned_cols=119 Identities=7% Similarity=-0.051 Sum_probs=72.4
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeec----ccccCCHHHHhhcCCCccE
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA----IPVHSTVEAACAAHPMADV 81 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G----~~~y~sv~~i~~~~p~vDl 81 (608)
+|..++||| |..|+ +++.+.+.. +.++++.++ +.... ...+ .+-.| .++|.++++++... ++|+
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~-----~~~lv~v~d-~~~~~-~~~~--a~~~~~~~~~~~~~~~~~ll~~~-~~D~ 74 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAP-----NATISGVAS-RSLEK-AKAF--ATANNYPESTKIHGSYESLLEDP-EIDA 74 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCT-----TEEEEEEEC-SSHHH-HHHH--HHHTTCCTTCEEESSHHHHHHCT-TCCE
T ss_pred CceEEEEECchHHHHHHHHHHhhCC-----CcEEEEEEc-CCHHH-HHHH--HHHhCCCCCCeeeCCHHHHhcCC-CCCE
Confidence 456788885 33333 777777653 334555555 42210 0000 01223 57899999987642 5999
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
++|++|.....+ ...+|.++|. .+++-- -.......++|.+.|+++|+. .+|.|.
T Consensus 75 V~i~tp~~~h~~-~~~~al~aGk-~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~ 131 (362)
T 1ydw_A 75 LYVPLPTSLHVE-WAIKAAEKGK-HILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMW 131 (362)
T ss_dssp EEECCCGGGHHH-HHHHHHTTTC-EEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCG
T ss_pred EEEcCChHHHHH-HHHHHHHCCC-eEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 999999986444 4455555785 455421 244555778999999999986 456554
No 77
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.59 E-value=0.023 Score=58.41 Aligned_cols=116 Identities=16% Similarity=-0.008 Sum_probs=69.9
Q ss_pred CcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeec-ccccCCHHHHhhcCCCccEEEEec
Q 007327 10 TTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA-IPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G-~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
..++||| | ++..+++.+.+.+ +.++++.++ +.... ...+ . +-.| .+.|.+.+++. . +++|+++|++
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~-----~~~~~~v~d-~~~~~-~~~~-~-~~~~~~~~~~~~~~~l-~-~~~D~V~i~t 70 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSG-----EYQLVAIYS-RKLET-AATF-A-SRYQNIQLFDQLEVFF-K-SSFDLVYIAS 70 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT-----SEEEEEEEC-SSHHH-HHHH-G-GGSSSCEEESCHHHHH-T-SSCSEEEECS
T ss_pred eEEEEEeCCHHHHHHHHHHHhCC-----CeEEEEEEe-CCHHH-HHHH-H-HHcCCCeEeCCHHHHh-C-CCCCEEEEeC
Confidence 4678885 2 2223777777653 233555555 42210 0001 1 2234 37899999987 2 2589999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
|+....+.+. +|.++|. .+++-. -.......++|.+.|+++|.. .+|.|.
T Consensus 71 p~~~h~~~~~-~al~~gk-~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 122 (325)
T 2ho3_A 71 PNSLHFAQAK-AALSAGK-HVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARN 122 (325)
T ss_dssp CGGGHHHHHH-HHHHTTC-EEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred ChHHHHHHHH-HHHHcCC-cEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhh
Confidence 9986444444 4444774 455532 344555778999999999976 456553
No 78
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=95.55 E-value=0.011 Score=61.52 Aligned_cols=116 Identities=12% Similarity=0.012 Sum_probs=72.0
Q ss_pred CcEEEEE-c-CCchHHHHHh-hCcccCCCCCCcEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEE
Q 007327 10 TTQALFY-N-YKQLPIQRML-DFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~-~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G--~~~y~sv~~i~~~~p~vDlavi 84 (608)
..++||| | ++..+++.+. +.. +.++++.++ +.... ...+ .+-.| .+.|.+++|+... +++|+++|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~-----~~~l~av~d-~~~~~-~~~~--~~~~g~~~~~~~~~~~ll~~-~~~D~V~i 72 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLS-----GAEIVAVTD-VNQEA-AQKV--VEQYQLNATVYPNDDSLLAD-ENVDAVLV 72 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCS-----SEEEEEEEC-SSHHH-HHHH--HHHTTCCCEEESSHHHHHHC-TTCCEEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCC-----CcEEEEEEc-CCHHH-HHHH--HHHhCCCCeeeCCHHHHhcC-CCCCEEEE
Confidence 4688885 2 2223778887 432 334565555 52220 0000 12235 6799999998764 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE--EcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV--IGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv--lGPN 137 (608)
++|.....+.+.+ |.++|. .+++-- -.......++|.+.|+++|.++ +|-|
T Consensus 73 ~tp~~~h~~~~~~-al~~Gk-~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~ 126 (344)
T 3mz0_A 73 TSWGPAHESSVLK-AIKAQK-YVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFM 126 (344)
T ss_dssp CSCGGGHHHHHHH-HHHTTC-EEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCG
T ss_pred CCCchhHHHHHHH-HHHCCC-cEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecc
Confidence 9999875555554 445784 455422 2445557789999999999876 4554
No 79
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.51 E-value=0.017 Score=62.25 Aligned_cols=115 Identities=11% Similarity=0.066 Sum_probs=73.7
Q ss_pred CCcEEEEEcC------Cch-HHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeeccc---ccCCHHHHhhcCC
Q 007327 9 KTTQALFYNY------KQL-PIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP---VHSTVEAACAAHP 77 (608)
Q Consensus 9 p~s~avv~g~------~~~-~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~---~y~sv~~i~~~~p 77 (608)
|..++||| . .++ +++.+.+. . +.++++.++ +.... ...+ .+-.|++ +|.+++|++.. +
T Consensus 20 ~irvgiIG-~g~~gG~~g~~~~~~l~~~~~-----~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~~ll~~-~ 88 (438)
T 3btv_A 20 PIRVGFVG-LNAAKGWAIKTHYPAILQLSS-----QFQITALYS-PKIET-SIAT--IQRLKLSNATAFPTLESFASS-S 88 (438)
T ss_dssp CEEEEEES-CCTTSSSTTTTHHHHHHHTTT-----TEEEEEEEC-SSHHH-HHHH--HHHTTCTTCEEESSHHHHHHC-S
T ss_pred CCEEEEEc-ccCCCChHHHHHHHHHHhcCC-----CeEEEEEEe-CCHHH-HHHH--HHHcCCCcceeeCCHHHHhcC-C
Confidence 45688884 4 233 88888876 3 334566555 42210 0000 1224555 89999998764 3
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCC-----CEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEc
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTI-----RVVAII-AEGVPEADTKQLIAYARSNNKV-VIG 135 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv-----~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlG 135 (608)
++|+++|++|.....+.+++++. +|. |.++|= .-.....+.++|.+.|+++|+. .+|
T Consensus 89 ~vD~V~i~tp~~~H~~~~~~al~-aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 152 (438)
T 3btv_A 89 TIDMIVIAIQVASHYEVVMPLLE-FSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIIS 152 (438)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHH-HGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEeCCcHHHHHHHHHHHH-CCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 69999999999875555655555 773 777764 2344555778999999999986 444
No 80
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.48 E-value=0.017 Score=60.41 Aligned_cols=116 Identities=10% Similarity=0.031 Sum_probs=73.2
Q ss_pred CCCcEEEEE-cCCch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 8 SKTTQALFY-NYKQL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 8 ~p~s~avv~-g~~~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+|..++||| |..++ +++.+.+.. +.++++.++ +.... ...+..|.++|.++++++.. +++|+++|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-----~~~~~~~~~~~~~~~~ll~~-~~vD~V~i 71 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLD-----EYQISKIMT-SRTEE-----VKRDFPDAEVVHELEEITND-PAIELVIV 71 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCT-----TEEEEEEEC-SCHHH-----HHHHCTTSEEESSTHHHHTC-TTCCEEEE
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCC-----CeEEEEEEc-CCHHH-----HHhhCCCCceECCHHHHhcC-CCCCEEEE
Confidence 356788885 22232 566666542 334565555 43221 01233478999999998864 36999999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
++|.....+.+++++. +| |.+++=-- .....+.++|.+.|+++|+. .+|-|
T Consensus 72 ~tp~~~H~~~~~~al~-aG-khVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~ 124 (358)
T 3gdo_A 72 TTPSGLHYEHTMACIQ-AG-KHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHN 124 (358)
T ss_dssp CSCTTTHHHHHHHHHH-TT-CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECG
T ss_pred cCCcHHHHHHHHHHHH-cC-CeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeee
Confidence 9999875555555554 78 45555211 34445678899999999986 45554
No 81
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.43 E-value=0.026 Score=57.61 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=70.6
Q ss_pred CCCCcEEEEE-c-CCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 7 FSKTTQALFY-N-YKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
.++..++||| | ++.. +++.+.+.. +.++++.++ +.... ...+ .+-.|++.|.+++++.. ++|+++
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~-----~~~l~av~d-~~~~~-~~~~--a~~~~~~~~~~~~~ll~---~~D~V~ 71 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSE-----RFEFVGAFT-PNKVK-REKI--CSDYRIMPFDSIESLAK---KCDCIF 71 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCS-----SSEEEEEEC-SCHHH-HHHH--HHHHTCCBCSCHHHHHT---TCSEEE
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCC-----CeEEEEEEC-CCHHH-HHHH--HHHcCCCCcCCHHHHHh---cCCEEE
Confidence 3467889995 2 2222 566666643 334565555 42210 0001 12357888999999876 489999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
|++|.....+.+.+ |.++|.. +++= .-.......++|.+.|+++|+.+
T Consensus 72 i~tp~~~h~~~~~~-al~~gk~-vl~EKP~~~~~~~~~~l~~~a~~~g~~~ 120 (308)
T 3uuw_A 72 LHSSTETHYEIIKI-LLNLGVH-VYVDKPLASTVSQGEELIELSTKKNLNL 120 (308)
T ss_dssp ECCCGGGHHHHHHH-HHHTTCE-EEECSSSSSSHHHHHHHHHHHHHHTCCE
T ss_pred EeCCcHhHHHHHHH-HHHCCCc-EEEcCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 99999875554544 4457865 3332 23455567888999999999764
No 82
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.31 E-value=0.049 Score=57.33 Aligned_cols=117 Identities=9% Similarity=-0.004 Sum_probs=74.3
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++.++|+||| |..|. +.++|.+.||. |.+++ .... ....+. -.|+..+.+++|+......+|++++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~-------V~v~d-r~~~-~~~~l~---~~g~~~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHE-------CVVYD-LNVN-AVQALE---REGIAGARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SCHH-HHHHHH---TTTCBCCSSHHHHHHHSCSSCEEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCE-------EEEEe-CCHH-HHHHHH---HCCCEEeCCHHHHHhcCCCCCEEEE
Confidence 4567899995 33333 88899998764 55666 4221 011110 1367788899998764323599999
Q ss_pred eccChhcHHHHHHHhcCC-CCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcC
Q 007327 85 FSSFRSAAASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~-gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGP 136 (608)
+||.. .+..+++.+... .-..+||-.+.......+++.+.+++.|+++++.
T Consensus 88 ~vp~~-~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 88 MVPAA-VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp CSCGG-GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCHH-HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 99998 588888877532 2234555555555556667777788888877653
No 83
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.30 E-value=0.056 Score=55.67 Aligned_cols=112 Identities=7% Similarity=0.031 Sum_probs=71.2
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++|+||| |..|. +.+++.+.||. |..++ +... ..+.+. -.|+..+.+++|+.. +.|+++++|
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~-------V~~~d-r~~~-~~~~l~---~~g~~~~~~~~e~~~---~aDvVi~~v 95 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYA-------LQVWN-RTPA-RAASLA---ALGATIHEQARAAAR---DADIVVSML 95 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCE-------EEEEC-SCHH-HHHHHH---TTTCEEESSHHHHHT---TCSEEEECC
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCe-------EEEEc-CCHH-HHHHHH---HCCCEeeCCHHHHHh---cCCEEEEEC
Confidence 35789996 44455 88888888764 55665 4221 011111 126788899999765 479999999
Q ss_pred cChhcHHHHHH---HhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 87 SFRSAAASSMA---ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 87 p~~~~~~~~le---~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
|....+..++. ......-+.+||-++.......+++.+.+++.|++++.
T Consensus 96 p~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 147 (320)
T 4dll_A 96 ENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD 147 (320)
T ss_dssp SSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 97655666653 22212334466666666666777788888888877654
No 84
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.26 E-value=0.025 Score=58.47 Aligned_cols=119 Identities=17% Similarity=0.097 Sum_probs=71.3
Q ss_pred CCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEe
Q 007327 9 KTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 9 p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~~p~vDlavi~ 85 (608)
|..++||| | ++.++++.+.+.... +.++++.++ +... ....+ .+-.|++ +|.+++|++.. +++|+++|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~---~~~l~av~d-~~~~-~a~~~--a~~~~~~~~~~~~~~ll~~-~~vD~V~i~ 73 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRS---EHQVVAVAA-RDLS-RAKEF--AQKHDIPKAYGSYEELAKD-PNVEVAYVG 73 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTT---TEEEEEEEC-SSHH-HHHHH--HHHHTCSCEESSHHHHHHC-TTCCEEEEC
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCC---CeEEEEEEc-CCHH-HHHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEEC
Confidence 35688885 2 222367777654310 123555554 4221 00001 1235664 89999998864 369999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeE-EcCC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVV-IGPA 137 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rv-lGPN 137 (608)
+|.....+.+.+++. +| |.+++=- -.....+.++|.+.|+++|+.+ +|-|
T Consensus 74 tp~~~H~~~~~~al~-~G-khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~ 125 (334)
T 3ohs_X 74 TQHPQHKAAVMLCLA-AG-KAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIW 125 (334)
T ss_dssp CCGGGHHHHHHHHHH-TT-CEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECG
T ss_pred CCcHHHHHHHHHHHh-cC-CEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEh
Confidence 999875555555554 78 4555521 1334456789999999999864 4443
No 85
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.23 E-value=0.038 Score=57.69 Aligned_cols=122 Identities=20% Similarity=0.082 Sum_probs=71.6
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCc--ccCCCCCCcEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEE
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFD--FLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~--~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~-~~y~sv~~i~~~~p~vDla 82 (608)
+|=.++||| |..|+ +++.+.... |.-..+.++++.++ +.... .+.+ .+-.|+ ++|.+.+|++.. +++|++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d-~~~~~-a~~~--a~~~g~~~~y~d~~ell~~-~~iDaV 98 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE-ANAGL-AEAR--AGEFGFEKATADWRALIAD-PEVDVV 98 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC-C--TT-HHHH--HHHHTCSEEESCHHHHHHC-TTCCEE
T ss_pred CCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC-CCHHH-HHHH--HHHhCCCeecCCHHHHhcC-CCCcEE
Confidence 444788995 22233 454443321 10001334666665 53321 0111 123466 489999998865 369999
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEEecC---CCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAIIAE---GVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~viis~---Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+|++|...-.+.+++++. +|.. ++ .+ .....+.++|++.|+++|+. .+|-|.
T Consensus 99 ~IatP~~~H~~~a~~al~-aGkh-Vl--~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~ 154 (393)
T 4fb5_A 99 SVTTPNQFHAEMAIAALE-AGKH-VW--CEKPMAPAYADAERMLATAERSGKVAALGYNY 154 (393)
T ss_dssp EECSCGGGHHHHHHHHHH-TTCE-EE--ECSCSCSSHHHHHHHHHHHHHSSSCEEECCGG
T ss_pred EECCChHHHHHHHHHHHh-cCCe-EE--EccCCcccHHHHHHhhhhHHhcCCcccccccc
Confidence 999999876666666665 6754 33 33 33444678999999999975 555543
No 86
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.22 E-value=0.05 Score=57.71 Aligned_cols=122 Identities=11% Similarity=-0.015 Sum_probs=73.5
Q ss_pred CCCCcEEEEE-cC---Cch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecc---cccCCHHHHhhcC--
Q 007327 7 FSKTTQALFY-NY---KQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI---PVHSTVEAACAAH-- 76 (608)
Q Consensus 7 ~~p~s~avv~-g~---~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~---~~y~sv~~i~~~~-- 76 (608)
.+|..++||| |. -|+ +++.+...+ +.+++++|.-+... ....+ .+-.|+ ++|.|++|++...
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-----~~~lva~v~d~~~~-~a~~~--a~~~g~~~~~~~~~~~~ll~~~~~ 81 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDN-----TFVLVAGAFDIDPI-RGSAF--GEQLGVDSERCYADYLSMFEQEAR 81 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGG-----SEEEEEEECCSSHH-HHHHH--HHHTTCCGGGBCSSHHHHHHHHTT
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCC-----CeEEEEEEeCCCHH-HHHHH--HHHhCCCcceeeCCHHHHHhcccc
Confidence 4566899996 32 344 666666554 23466644214221 00001 123566 6999999987641
Q ss_pred --CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 77 --PMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 77 --p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+++|+++|++|.....+.+++++. +|. .+++= .-.....+.++|.+.|+++|+. .+|-|.
T Consensus 82 ~~~~vD~V~i~tp~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 145 (398)
T 3dty_A 82 RADGIQAVSIATPNGTHYSITKAALE-AGL-HVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGY 145 (398)
T ss_dssp CTTCCSEEEEESCGGGHHHHHHHHHH-TTC-EEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGG
T ss_pred cCCCCCEEEECCCcHHHHHHHHHHHH-CCC-eEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecc
Confidence 359999999999875555555554 785 44441 1134445778999999999986 455443
No 87
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.19 E-value=0.021 Score=61.55 Aligned_cols=118 Identities=17% Similarity=0.104 Sum_probs=70.7
Q ss_pred CCcEEEEE-cCCc--hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-----ccCCHHHHhhcCCCcc
Q 007327 9 KTTQALFY-NYKQ--LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-----VHSTVEAACAAHPMAD 80 (608)
Q Consensus 9 p~s~avv~-g~~~--~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-----~y~sv~~i~~~~p~vD 80 (608)
+..++||| |..| .+++.+.+.. +.++++.++ +.... ...+ .+-.|++ .|.++++++.. +++|
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~-----~~~lvav~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~~~~ll~~-~~vD 152 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQ-----HSRIEALVS-GNAEK-AKIV--AAEYGVDPRKIYDYSNFDKIAKD-PKID 152 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCS-----SEEEEEEEC-SCHHH-HHHH--HHHTTCCGGGEECSSSGGGGGGC-TTCC
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCC-----CcEEEEEEc-CCHHH-HHHH--HHHhCCCcccccccCCHHHHhcC-CCCC
Confidence 34678885 2223 3667776643 234565555 42210 0001 1123444 79999998764 3699
Q ss_pred EEEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 81 VFINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+++|++|.....+.+++++ ++|. .+++-- -.....+.++|.+.|+++|+. .+|.|.
T Consensus 153 ~V~iatp~~~h~~~~~~al-~aGk-~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~ 210 (433)
T 1h6d_A 153 AVYIILPNSLHAEFAIRAF-KAGK-HVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRC 210 (433)
T ss_dssp EEEECSCGGGHHHHHHHHH-HTTC-EEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGG
T ss_pred EEEEcCCchhHHHHHHHHH-HCCC-cEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEech
Confidence 9999999987555555554 4785 444421 244555678999999999976 555554
No 88
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.15 E-value=0.086 Score=52.96 Aligned_cols=110 Identities=5% Similarity=-0.041 Sum_probs=64.6
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
+++++||| |..|. +.+++.+.|+. |..++.|.+. ..+.. .|+..+.++.++.. +.|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~-------V~~~~~~~~~---~~~~~---~g~~~~~~~~~~~~---~~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQ-------LHVTTIGPVA---DELLS---LGAVNVETARQVTE---FADIIFIMV 66 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCE-------EEECCSSCCC---HHHHT---TTCBCCSSHHHHHH---TCSEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCE-------EEEEcCHHHH---HHHHH---cCCcccCCHHHHHh---cCCEEEEEC
Confidence 46889986 44454 77888887653 3333323222 11111 26778889988765 479999999
Q ss_pred cChhcHHHHHH---HhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 87 SFRSAAASSMA---ALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 87 p~~~~~~~~le---~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
|....+..+++ .+.. ..-..+||..+.......+++.+.+++.|++++
T Consensus 67 p~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 118 (295)
T 1yb4_A 67 PDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYL 118 (295)
T ss_dssp SSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred CCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 98765667776 3332 122334443333343455667777776666655
No 89
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=95.07 E-value=0.033 Score=59.04 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=63.7
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+-|+.++.+-++..|.-+ ..-+.. ..++.
T Consensus 9 gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~ 82 (377)
T 1iom_A 9 GVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS-SFEETTFLLLHGRLPRRQELEEFSAALARR---RALPAH--LLESF 82 (377)
T ss_dssp TCCCSCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CSCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---CCCCHH--HHHHH
Confidence 445566777766664 5999999999999988 999999999999999988888888866543 333333 22233
Q ss_pred ccC--CCChHHHHHHhhhcc
Q 007327 427 ARA--GKDLVSSLVSGLLTI 444 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~ 444 (608)
.+- .++|-..+.++++++
T Consensus 83 ~~~p~~~hpM~~l~~~v~~l 102 (377)
T 1iom_A 83 KRYPVSAHPMSFLRTAVSEF 102 (377)
T ss_dssp TTSCTTSCHHHHHHHHHHHH
T ss_pred HhCCcCCCchhHHHHHHHHH
Confidence 332 356666666666665
No 90
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.06 E-value=0.14 Score=51.87 Aligned_cols=111 Identities=12% Similarity=0.037 Sum_probs=72.4
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++|+||| |..|. +.+++.+.||. |.+++ ..... .+.+ .-.|+....+++|+.. .|+++++|
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~-------V~~~d-r~~~~-~~~~---~~~g~~~~~~~~~~~~----aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGG-------VTVYD-IRIEA-MTPL---AEAGATLADSVADVAA----ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTC-------EEEEC-SSTTT-SHHH---HHTTCEECSSHHHHTT----SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe-------EEEEe-CCHHH-HHHH---HHCCCEEcCCHHHHHh----CCEEEEEC
Confidence 45799996 44455 78888888764 55555 32221 1111 0136788889999753 59999999
Q ss_pred cChhcHHHHHHHhcCC-CCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 87 SFRSAAASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 87 p~~~~~~~~le~~~~~-gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
|....+..+++.+.+. .-+.+||-++.......+++.+.+++.|++++.
T Consensus 79 p~~~~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 128 (296)
T 3qha_A 79 LDDAQVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD 128 (296)
T ss_dssp SSHHHHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 9765567777766532 234566666666666777788888777777654
No 91
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=94.99 E-value=0.034 Score=58.86 Aligned_cols=90 Identities=11% Similarity=0.017 Sum_probs=63.5
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+-|+.++.+-++..|.-+ ..-+.. ..++.
T Consensus 9 g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~ 82 (373)
T 1vgp_A 9 DVYVKETEITYIDGELGRLYYRGYSIYDLAEFS-NFEEVSYLILYGKLPNREELNWFQEKLREE---RYLPDF--IIKFL 82 (373)
T ss_dssp TCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHc---cCCCHH--HHHHH
Confidence 444566777766664 5999999999999988 999999999999999988888888766544 333333 22232
Q ss_pred cc--CCCChHHHHHHhhhcc
Q 007327 427 AR--AGKDLVSSLVSGLLTI 444 (608)
Q Consensus 427 aS--t~a~~~~av~agl~a~ 444 (608)
.+ ..++|-..+.++++++
T Consensus 83 ~~~p~~~hpM~~l~~~v~~l 102 (373)
T 1vgp_A 83 REVRKDAQPMDILRTAVSLL 102 (373)
T ss_dssp HHSCTTSCHHHHHHHHHHHH
T ss_pred HhCCCCCChHHHHHHHHHHH
Confidence 22 2356666666666665
No 92
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=94.98 E-value=0.016 Score=61.18 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=66.3
Q ss_pred CcchhhhheeccCC--CCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g--~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.| ..+.|||+++.||.++. +|+++.|+||+|+.|++++.+-++..|.-+ ..-+.. ..++.
T Consensus 8 g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LLl~G~lPt~~el~~f~~~l~~~---~~lp~~--~~~~~ 81 (367)
T 2p2w_A 8 GVKICESSICYLDGINGRLYYRGIPVEELAEKS-TFEETAYFLWYGKLPTKSELEEFKRKMADY---RELPAE--ALGIL 81 (367)
T ss_dssp TCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHT---CCCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEECCeeHHHHHcCC-CHHHHHHHHHCCCCCCHHHHHHHHHHHHHc---cCCCHH--HHHHH
Confidence 44556777776666 45999999999999998 999999999999999888888888766544 333333 22233
Q ss_pred cc--CCCChHHHHHHhhhccCC
Q 007327 427 AR--AGKDLVSSLVSGLLTIGP 446 (608)
Q Consensus 427 aS--t~a~~~~av~agl~a~Gp 446 (608)
.+ ..++|-..+.+++++++.
T Consensus 82 ~~~p~~~hpM~~l~~~v~~l~~ 103 (367)
T 2p2w_A 82 YHLPKNLHYIDVLKIFLSIHGS 103 (367)
T ss_dssp TTSCSCCCHHHHHHHHHSCC--
T ss_pred HhCccCCChHHHHHHHHHHHhc
Confidence 23 346788888888888754
No 93
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.88 E-value=0.025 Score=58.09 Aligned_cols=112 Identities=14% Similarity=0.005 Sum_probs=63.4
Q ss_pred CCCcEEEEE-cCCc-hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-NYKQ-LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g~~~-~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+|..++||| |.-| .+++.+.+.. +.++++.++ +.... . ++ .|++ |.+.+++.+. +++|+++++
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~-----~~elvav~d-~~~~~-~-----~~-~g~~-~~~~~~l~~~-~~~DvViia 72 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAP-----DFEIAGIVR-RNPAE-V-----PF-ELQP-FRVVSDIEQL-ESVDVALVC 72 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCT-----TEEEEEEEC-C--------------CCTT-SCEESSGGGS-SSCCEEEEC
T ss_pred CCCEEEEECChHHHHHHHHHHhcCC-----CCEEEEEEc-CCHHH-H-----HH-cCCC-cCCHHHHHhC-CCCCEEEEC
Confidence 466788885 2222 3777777643 334555555 42221 0 12 5665 4444443322 369999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEecC--CCCHHHHHHHHHHHHhCCCe-EEcC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIAE--GVPEADTKQLIAYARSNNKV-VIGP 136 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis~--Gf~e~~~~~l~~~a~~~g~r-vlGP 136 (608)
+|..... ...+.|.++|.. +++-+. +......++|.+.+++.|.. ++|.
T Consensus 73 tp~~~h~-~~~~~al~aG~~-Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~ 124 (304)
T 3bio_A 73 SPSREVE-RTALEILKKGIC-TADSFDIHDGILALRRSLGDAAGKSGAAAVIAS 124 (304)
T ss_dssp SCHHHHH-HHHHHHHTTTCE-EEECCCCGGGHHHHHHHHHHHHHHHTCEEECSC
T ss_pred CCchhhH-HHHHHHHHcCCe-EEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeC
Confidence 9987644 445555557865 444321 33334668899999999964 5663
No 94
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=94.78 E-value=0.027 Score=60.12 Aligned_cols=90 Identities=11% Similarity=0.076 Sum_probs=63.9
Q ss_pred CcchhhhheeccC--CCCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDR--GEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~--g~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-. ...+.||||++.||.++. +|+++.|+||+|+.|+.++.+.+..-|. .|..-|.. +..+.
T Consensus 39 gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~---~~~~lp~~--~~~~~ 112 (404)
T 3o8j_A 39 GVPAGNTALCTVGKSGNDLHYRGYDILDLAEHC-EFEEVAHLLIHGKLPTRDELNAYKSKLK---ALRGLPAN--VRTVL 112 (404)
T ss_dssp --CCCEESSEEECC-CCCEEETTEEHHHHHHHC-CHHHHHHHHHTSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHH
T ss_pred CceEeeeeceeeeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCcCCCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 4445567777664 456999999999999888 9999999999998888888888887664 44444443 23344
Q ss_pred ccC--CCChHHHHHHhhhcc
Q 007327 427 ARA--GKDLVSSLVSGLLTI 444 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~ 444 (608)
.+- .++|-..+.++++++
T Consensus 113 ~~~p~~~hPM~~L~~~vsaL 132 (404)
T 3o8j_A 113 EALPAASHPMDVMRTGVSAL 132 (404)
T ss_dssp HTSCTTSCHHHHHHHHHHHH
T ss_pred HhCCCCCChHHHHHHHHHHH
Confidence 333 467777777777765
No 95
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=94.72 E-value=0.18 Score=54.12 Aligned_cols=92 Identities=11% Similarity=-0.008 Sum_probs=66.9
Q ss_pred CcchhhhheeccCC--CCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g--~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+++..+.||.-.| ..+.||||++.||.++. +|+++.|+||+|+.|+.++.+.++.-|.- |..-+.. +.++.
T Consensus 48 ~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--~~~~~ 121 (426)
T 3l96_A 48 STTSCESKITFIDGDEGILLHRGFPIDQLATDS-NYLEVCYILLNGEKPTQEQYDEFKTTVTR---HTMIHEQ--ITRLF 121 (426)
T ss_dssp SEEEEEESSEEEEGGGTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCSCCHH--HHHHH
T ss_pred CceEEeEEeEEEECCCCEEEECCeEHHHHHhcC-CHHHHHHHHHCCcCCCHHHHHHHHHHHHH---ccCCCHH--HHHHH
Confidence 34455666665555 35799999999999888 99999999999999888888888886654 4333333 34455
Q ss_pred ccC--CCChHHHHHHhhhccCC
Q 007327 427 ARA--GKDLVSSLVSGLLTIGP 446 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~Gp 446 (608)
.+- .++|-..+.+++++++.
T Consensus 122 ~~~p~~~hPM~~l~~~vsaL~~ 143 (426)
T 3l96_A 122 HAFRRDSHPMAVMCGITGALAA 143 (426)
T ss_dssp TTSCTTSCHHHHHHHHHTTGGG
T ss_pred HhcCCCCCHHHHHHHHHHHHHh
Confidence 444 36788888888888753
No 96
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=94.69 E-value=0.076 Score=55.71 Aligned_cols=125 Identities=22% Similarity=0.177 Sum_probs=75.7
Q ss_pred CccCCCCCCCcEEEEEc------CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCC-ccccccCceeecccccCCHHHHh
Q 007327 1 MATGQLFSKTTQALFYN------YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAAC 73 (608)
Q Consensus 1 ~~~~~l~~p~s~avv~g------~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~-~~~~~~g~ev~G~~~y~sv~~i~ 73 (608)
|.+-.++.+...+++.+ ..+|....++++. ++.++|+.+ +.+.| +..++.+..-.|+|++.|++++.
T Consensus 13 ~~~~~~~~~~~~~vi~~~g~~g~~~aKta~gllr~~----~~~~iVgvi--~~~~Gkd~ge~~~g~~~gipv~~d~~~al 86 (350)
T 2g0t_A 13 MDLWKLYQPGTPAAIVAWGQLGTAHAKTTYGLLRHS----RLFKPVCVV--AEHEGKMASDFVKPVRYDVPVVSSVEKAK 86 (350)
T ss_dssp CCHHHHSCTTEEEEEECTTTTTSGGGHHHHHHHHHC----SSEEEEEEE--SSCTTCBGGGTCC-CCSCCBEESSHHHHH
T ss_pred hhHHhhhCcCCCEEEEeCCCCChHHHHHHHHHHhhC----CCCeEEEEe--ecCCCCcHHHhhCCCCCCceeeCCHHHHH
Confidence 34444566666666654 2234666778872 022456555 64433 66666532347999999999998
Q ss_pred hcCCCccEEEEecc-Ch-----hcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcC
Q 007327 74 AAHPMADVFINFSS-FR-----SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 74 ~~~p~vDlavi~vp-~~-----~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGP 136 (608)
.. .+|.+|+.+. .. ...+.+.+++ ++|..-+- +-.....+..+|.++|+++|..+++=
T Consensus 87 ~~--~~d~lvig~a~~gg~l~~~~~~~I~~Al-~~G~nVvs--glh~~l~~~pel~~~A~~~Gv~i~dv 150 (350)
T 2g0t_A 87 EM--GAEVLIIGVSNPGGYLEEQIATLVKKAL-SLGMDVIS--GLHFKISQQTEFLKIAHENGTRIIDI 150 (350)
T ss_dssp HT--TCCEEEECCCSCCHHHHHHHHHHHHHHH-HTTCEEEE--CCCC--CCHHHHHHHHHHHTCCEEES
T ss_pred hc--CCCEEEEEecCCCCCCCHHHHHHHHHHH-HcCCcEEe--CChhhhhCCHHHHHHHHHCCCEEEEe
Confidence 64 3799999862 22 1124444444 47876322 22333346678999999999988874
No 97
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.66 E-value=0.16 Score=51.46 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=70.3
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++|+||| |..|. +.+++.+.||. |..++ +... ..+.+ .-.|+..+.+.+|+.. +.|+++++||
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~-------V~~~d-~~~~-~~~~~---~~~g~~~~~~~~~~~~---~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYL-------LNVFD-LVQS-AVDGL---VAAGASAARSARDAVQ---GADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCE-------EEEEC-SSHH-HHHHH---HHTTCEECSSHHHHHT---TCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCe-------EEEEc-CCHH-HHHHH---HHCCCeEcCCHHHHHh---CCCeEEEECC
Confidence 5788886 44444 88888888764 55555 4221 00111 0127788899998765 4799999999
Q ss_pred ChhcHHHHHH---HhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 88 FRSAAASSMA---ALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 88 ~~~~~~~~le---~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
....+..+++ ...+ ..-+.+||-++.......+++.+..++.|++++.
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~ 120 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD 120 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7655677776 3332 2233455655666666667787778777776543
No 98
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=94.64 E-value=0.035 Score=59.48 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=72.3
Q ss_pred CcchhhhheeccCC--CCcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRG--EEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g--~~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.| ..+.||||++.||.++. +|+++.|+||+|+.|++++.+.++.-|.- |..-|.. +..+.
T Consensus 55 gv~~~~t~Is~idg~~G~L~YRGy~I~dLa~~~-~fEevayLLl~G~LPt~~el~~f~~~l~~---~~~lp~~--v~~~i 128 (414)
T 3hwk_A 55 GVVVDTTAISKVVPQTNSLTYRGYPVQDLAARC-SFEQVAFLLWRGELPTDAELALFSQRERA---SRRVDRS--MLSLL 128 (414)
T ss_dssp TCEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHH---TCCCCHH--HHHHH
T ss_pred CCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHHH---ccCCCHH--HHHHH
Confidence 45566777776654 45999999999999888 99999999999998888888888886654 3333333 33343
Q ss_pred ccC--CCChHHHHHHhhhccC---CCC---cCccHHHHHHHHHH
Q 007327 427 ARA--GKDLVSSLVSGLLTIG---PRF---GGAIDDAARYFKDA 462 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~G---p~h---GGa~~~a~~~l~~~ 462 (608)
.+- .++|-..+.+++++++ |.. -...+.+++++.++
T Consensus 129 ~~~p~~~hPM~~l~~~vsaL~~~~~~~~~~~~~~~~a~rLiAk~ 172 (414)
T 3hwk_A 129 AKLPDNCHPMDVVRTAISYLGAEDPDEDDAAANRAKAMRMMAVL 172 (414)
T ss_dssp HHSCTTSCHHHHHHHHHHHHHHTCTTTTCGGGHHHHHHHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHHhhcCCcccCHHHHHHHHHHHHHHH
Confidence 333 3677777777777753 322 11234456666554
No 99
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.62 E-value=0.037 Score=57.38 Aligned_cols=114 Identities=12% Similarity=0.038 Sum_probs=69.7
Q ss_pred cEEEEEcCC--ch--HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEe
Q 007327 11 TQALFYNYK--QL--PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 11 s~avv~g~~--~~--~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~~p~vDlavi~ 85 (608)
.++||| .+ ++ +++.+.+.. +.++++.++ +.... ...+ .+-.|+| +|.|.+|++.. +++|+++|+
T Consensus 25 rigiIG-~G~ig~~~~~~~~~~~~-----~~~lvav~d-~~~~~-a~~~--a~~~g~~~~y~d~~ell~~-~~iDaV~I~ 93 (350)
T 4had_A 25 RFGIIS-TAKIGRDNVVPAIQDAE-----NCVVTAIAS-RDLTR-AREM--ADRFSVPHAFGSYEEMLAS-DVIDAVYIP 93 (350)
T ss_dssp EEEEES-CCHHHHHTHHHHHHHCS-----SEEEEEEEC-SSHHH-HHHH--HHHHTCSEEESSHHHHHHC-SSCSEEEEC
T ss_pred EEEEEc-ChHHHHHHHHHHHHhCC-----CeEEEEEEC-CCHHH-HHHH--HHHcCCCeeeCCHHHHhcC-CCCCEEEEe
Confidence 688884 33 32 456666653 334665555 53220 0011 1235665 89999998865 369999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
+|...-.+.+++++. +|. .++|= .-.....+.++|++.|+++|+. .+|-|
T Consensus 94 tP~~~H~~~~~~al~-aGk-hVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~ 145 (350)
T 4had_A 94 LPTSQHIEWSIKAAD-AGK-HVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYM 145 (350)
T ss_dssp SCGGGHHHHHHHHHH-TTC-EEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCG
T ss_pred CCCchhHHHHHHHHh-cCC-EEEEeCCcccchhhHHHHHHHHHHcCCceeEeee
Confidence 999876666666555 775 44441 0022333578899999999876 45554
No 100
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.61 E-value=0.14 Score=51.52 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=71.3
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++|+||| |..|. +.+++.+.||. |...+ +.... .+.+ .-.|+....+++|+.. +.|+++++||
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~-------V~~~d-r~~~~-~~~~---~~~g~~~~~~~~~~~~---~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFD-------VTVWN-RNPAK-CAPL---VALGARQASSPAEVCA---ACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCC-------EEEEC-SSGGG-GHHH---HHHTCEECSCHHHHHH---HCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCe-------EEEEc-CCHHH-HHHH---HHCCCeecCCHHHHHH---cCCEEEEEcC
Confidence 4688886 44455 77888888764 55555 42221 1111 0136778889999766 3699999999
Q ss_pred ChhcHHHHH---HHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 88 FRSAAASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 88 ~~~~~~~~l---e~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
....+..++ +.+.. ..-+.++|-++.......+++.+.+++.|++++.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLE 118 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 875566666 44432 1233466666666666777888888888887654
No 101
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=94.59 E-value=0.07 Score=54.75 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=69.4
Q ss_pred cEEEEEcCC--ch-H-HHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhcCCCccEEEEe
Q 007327 11 TQALFYNYK--QL-P-IQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 11 s~avv~g~~--~~-~-~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~~p~vDlavi~ 85 (608)
.++|| |.+ |+ + ++.+.+. +.++++.++ +.... ...+ .+-.|++ .|.+++|+... +++|+++|+
T Consensus 2 ~vgii-G~G~~g~~~~~~~l~~~------~~~~vav~d-~~~~~-~~~~--~~~~g~~~~~~~~~~~l~~-~~~D~V~i~ 69 (332)
T 2glx_A 2 RWGLI-GASTIAREWVIGAIRAT------GGEVVSMMS-TSAER-GAAY--ATENGIGKSVTSVEELVGD-PDVDAVYVS 69 (332)
T ss_dssp EEEEE-SCCHHHHHTHHHHHHHT------TCEEEEEEC-SCHHH-HHHH--HHHTTCSCCBSCHHHHHTC-TTCCEEEEC
T ss_pred eEEEE-cccHHHHHhhhHHhhcC------CCeEEEEEC-CCHHH-HHHH--HHHcCCCcccCCHHHHhcC-CCCCEEEEe
Confidence 57788 443 32 4 6677663 334565555 42210 0001 1224665 89999998754 258999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+|+....+.+.+++ ++|. .+++-. -.....+.++|.+.|+++|+. .+|++.
T Consensus 70 tp~~~h~~~~~~al-~~Gk-~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 122 (332)
T 2glx_A 70 TTNELHREQTLAAI-RAGK-HVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHL 122 (332)
T ss_dssp SCGGGHHHHHHHHH-HTTC-EEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCG
T ss_pred CChhHhHHHHHHHH-HCCC-eEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 99986555454444 4774 455422 234455678999999999986 466654
No 102
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.55 E-value=0.094 Score=52.83 Aligned_cols=111 Identities=7% Similarity=-0.080 Sum_probs=70.6
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++|+||| |..|. +.+++.+.||. |..++ +... ..+.+ .-.|+..+.+++|+.. +.|+++++||
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~-------V~~~d-r~~~-~~~~~---~~~g~~~~~~~~~~~~---~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCS-------VTIWN-RSPE-KAEEL---AALGAERAATPCEVVE---SCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSGG-GGHHH---HHTTCEECSSHHHHHH---HCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCe-------EEEEc-CCHH-HHHHH---HHCCCeecCCHHHHHh---cCCEEEEEcC
Confidence 5788885 33333 78888888764 45555 4222 11111 0137788899999866 3799999999
Q ss_pred ChhcHHHHH---HHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 88 FRSAAASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 88 ~~~~~~~~l---e~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
....+..++ +.+.+ ..-..+||-+++......+++.+.+++.|++++.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~ 118 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE 118 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 654466666 33221 1223466667777777778888888888877654
No 103
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.51 E-value=0.093 Score=56.09 Aligned_cols=120 Identities=14% Similarity=0.023 Sum_probs=71.8
Q ss_pred CCCcEEEEEcCCc-----h-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecc---cccCCHHHHhhcC--
Q 007327 8 SKTTQALFYNYKQ-----L-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI---PVHSTVEAACAAH-- 76 (608)
Q Consensus 8 ~p~s~avv~g~~~-----~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~---~~y~sv~~i~~~~-- 76 (608)
+|..++||| .+. + +++.+...+ +.++++++.-+... ....+ .+-.|+ ++|.+++|++...
T Consensus 36 ~~~rvgiiG-~G~~~~ig~~h~~~~~~~~-----~~~lva~v~d~~~~-~a~~~--a~~~g~~~~~~~~~~~~ll~~~~~ 106 (417)
T 3v5n_A 36 KRIRLGMVG-GGSGAFIGAVHRIAARLDD-----HYELVAGALSSTPE-KAEAS--GRELGLDPSRVYSDFKEMAIREAK 106 (417)
T ss_dssp CCEEEEEES-CC--CHHHHHHHHHHHHTS-----CEEEEEEECCSSHH-HHHHH--HHHHTCCGGGBCSCHHHHHHHHHH
T ss_pred CcceEEEEc-CCCchHHHHHHHHHHhhCC-----CcEEEEEEeCCCHH-HHHHH--HHHcCCCcccccCCHHHHHhcccc
Confidence 455788885 332 3 566665543 23466545314221 00001 123467 6999999988640
Q ss_pred --CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 77 --PMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 77 --p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+++|+++|++|.....+ +.++|.++|.. ++|= .-.......++|.+.|+++|+. .+|-|.
T Consensus 107 ~~~~vD~V~I~tp~~~H~~-~~~~al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~ 170 (417)
T 3v5n_A 107 LKNGIEAVAIVTPNHVHYA-AAKEFLKRGIH-VICDKPLTSTLADAKKLKKAADESDALFVLTHNY 170 (417)
T ss_dssp CTTCCSEEEECSCTTSHHH-HHHHHHTTTCE-EEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGG
T ss_pred cCCCCcEEEECCCcHHHHH-HHHHHHhCCCe-EEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 35999999999986544 44555557854 4442 1134455778999999999986 555554
No 104
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.50 E-value=0.057 Score=59.02 Aligned_cols=118 Identities=9% Similarity=0.037 Sum_probs=73.6
Q ss_pred CCCcEEEEEcC---Cch----HHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeeccc---ccCCHHHHhhcC
Q 007327 8 SKTTQALFYNY---KQL----PIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP---VHSTVEAACAAH 76 (608)
Q Consensus 8 ~p~s~avv~g~---~~~----~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~---~y~sv~~i~~~~ 76 (608)
+|..++|| |. +|. +++.+.+. . +.++++.++ +.... ...+ .+-.|++ +|.+++|++..
T Consensus 38 ~~irvgiI-G~g~~GG~~g~~h~~~l~~~~~-----~~~lvav~d-~~~~~-a~~~--a~~~g~~~~~~~~d~~ell~~- 106 (479)
T 2nvw_A 38 RPIRVGFV-GLTSGKSWVAKTHFLAIQQLSS-----QFQIVALYN-PTLKS-SLQT--IEQLQLKHATGFDSLESFAQY- 106 (479)
T ss_dssp CCEEEEEE-CCCSTTSHHHHTHHHHHHHTTT-----TEEEEEEEC-SCHHH-HHHH--HHHTTCTTCEEESCHHHHHHC-
T ss_pred CcCEEEEE-cccCCCCHHHHHHHHHHHhcCC-----CeEEEEEEe-CCHHH-HHHH--HHHcCCCcceeeCCHHHHhcC-
Confidence 34568888 55 133 77777765 2 334565555 42210 0000 1224565 99999998864
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCCCC-----CEEEEec-CCCCHHHHHHHHHHHHhCC-Ce-EEcCC
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQPTI-----RVVAIIA-EGVPEADTKQLIAYARSNN-KV-VIGPA 137 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~gv-----~~~viis-~Gf~e~~~~~l~~~a~~~g-~r-vlGPN 137 (608)
+++|+++|++|.....+.+++++. +|. |.++|=- -.....+.++|.+.|+++| +. .+|-|
T Consensus 107 ~~vD~V~I~tp~~~H~~~~~~al~-aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~ 174 (479)
T 2nvw_A 107 KDIDMIVVSVKVPEHYEVVKNILE-HSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQ 174 (479)
T ss_dssp TTCSEEEECSCHHHHHHHHHHHHH-HSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECG
T ss_pred CCCCEEEEcCCcHHHHHHHHHHHH-CCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEec
Confidence 369999999999875555655555 783 7777632 1334446789999999999 65 44544
No 105
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=94.42 E-value=0.064 Score=53.73 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=53.9
Q ss_pred eeecccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCC-C-CHHHHHHHHHHHHhCCCeEEcC
Q 007327 59 EEIAIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG-V-PEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 59 ev~G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~G-f-~e~~~~~l~~~a~~~g~rvlGP 136 (608)
++ |+.+..++++++. ++|++|=|-+.. .+.+..+.+-++|+. +|+.|.| + .+...++|.+.|+++|.++.+|
T Consensus 45 el-gv~a~~d~d~lla---~pD~VVe~A~~~-av~e~~~~iL~aG~d-vv~~S~gaLad~~l~~~L~~aA~~gg~~l~vp 118 (253)
T 1j5p_A 45 DI-PGVVRLDEFQVPS---DVSTVVECASPE-AVKEYSLQILKNPVN-YIIISTSAFADEVFRERFFSELKNSPARVFFP 118 (253)
T ss_dssp CC-SSSEECSSCCCCT---TCCEEEECSCHH-HHHHHHHHHTTSSSE-EEECCGGGGGSHHHHHHHHHHHHTCSCEEECC
T ss_pred cc-CceeeCCHHHHhh---CCCEEEECCCHH-HHHHHHHHHHHCCCC-EEEcChhhhcCHHHHHHHHHHHHHCCCeEEec
Confidence 44 8888999999864 479998766655 467655666657876 4444555 3 4457799999999999999887
Q ss_pred C
Q 007327 137 A 137 (608)
Q Consensus 137 N 137 (608)
.
T Consensus 119 S 119 (253)
T 1j5p_A 119 S 119 (253)
T ss_dssp C
T ss_pred C
Confidence 4
No 106
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.38 E-value=0.15 Score=52.20 Aligned_cols=113 Identities=11% Similarity=-0.072 Sum_probs=72.7
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+.++|+||| |..|. +.++|.+.||. |...+ +... ....+ .-.|+....+++|+.. +.|+++++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~-------V~~~d-r~~~-~~~~l---~~~g~~~~~~~~~~~~---~aDvvi~~ 84 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFK-------VTVWN-RTLS-KCDEL---VEHGASVCESPAEVIK---KCKYTIAM 84 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSGG-GGHHH---HHTTCEECSSHHHHHH---HCSEEEEC
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCe-------EEEEe-CCHH-HHHHH---HHCCCeEcCCHHHHHH---hCCEEEEE
Confidence 346789885 33333 78888888764 55565 4222 11111 1136778899999776 37999999
Q ss_pred ccChhcHHHHH---HHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 86 SSFRSAAASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 86 vp~~~~~~~~l---e~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
||....+..++ +.+.. ..-..+||-++.......+++.+.+++.|++++.
T Consensus 85 vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~ 138 (310)
T 3doj_A 85 LSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE 138 (310)
T ss_dssp CSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence 99865566666 43322 2234566667777777777888888888877665
No 107
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.35 E-value=0.2 Score=50.36 Aligned_cols=109 Identities=12% Similarity=0.017 Sum_probs=67.2
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++++||| |..|. +.+++.+.|+. |..++ +... ....+. -.|+..+.+..++.. +.|+++++||
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~-------V~~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYP-------LIIYD-VFPD-ACKEFQ---DAGEQVVSSPADVAE---KADRIITMLP 65 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCC-------EEEEC-SSTH-HHHHHH---TTTCEECSSHHHHHH---HCSEEEECCS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHHH---HcCCeecCCHHHHHh---cCCEEEEeCC
Confidence 4688886 44444 77888887653 55555 3221 011110 126778889988765 3799999998
Q ss_pred ChhcHHHHHHHhc----CCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 88 FRSAAASSMAALK----QPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 88 ~~~~~~~~le~~~----~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
....+..+++... ...-+.++|-++|+.....+++.+.+.+.+..+
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~ 115 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVF 115 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 7665777776532 112234566678888776677777666655444
No 108
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.29 E-value=0.091 Score=57.48 Aligned_cols=118 Identities=12% Similarity=-0.007 Sum_probs=69.1
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev--~G~~~y~sv~~i~~~~p~vDla 82 (608)
.+.++|+||| |..|. +.++|.+.||. |...+ .... ....+. ++. .|+....|++|+.....+.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~-------V~v~~-r~~~-~~~~l~-~~~~~~gi~~~~s~~e~v~~l~~aDvV 82 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYT-------VSIFN-RSRE-KTEEVI-AENPGKKLVPYYTVKEFVESLETPRRI 82 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCC-------EEEEC-SSHH-HHHHHH-HHSTTSCEEECSSHHHHHHTBCSSCEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCe-------EEEEe-CCHH-HHHHHH-hhCCCCCeEEeCCHHHHHhCCCCCCEE
Confidence 4677899996 33333 88899998764 55555 3221 001110 000 2677888998876531127999
Q ss_pred EEeccChhcHHHHHHHhcCC-CCCEEEE-ecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 83 INFSSFRSAAASSMAALKQP-TIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~-gv~~~vi-is~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
+++||+...+.++++.+... .-..+|| .+.|.++ ..+++.+.+++.|+++++
T Consensus 83 il~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~-~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 83 LLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQ-DTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp EECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEE
T ss_pred EEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHCCCCeeC
Confidence 99999965578888877532 1123444 3445543 444556667777777663
No 109
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=94.15 E-value=0.035 Score=58.96 Aligned_cols=90 Identities=12% Similarity=0.069 Sum_probs=63.9
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+-|+.++.+-++..|. +|..-+.. ..++.
T Consensus 11 gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~ 84 (378)
T 1a59_A 11 GVTADVTAISKVNSDTNSLLYRGYPVQELAAKC-SFEQVAYLLWNSELPNDSELKAFVNFER---SHRKLDEN--VKGAI 84 (378)
T ss_dssp TCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TSCSCCHH--HHHHH
T ss_pred CCeeeeeeceEEECCCCeEEEcCccHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HcCCCCHH--HHHHH
Confidence 445567777766664 5999999999999988 9999999999999998888888887664 44433333 22233
Q ss_pred ccC--CCChHHHHHHhhhcc
Q 007327 427 ARA--GKDLVSSLVSGLLTI 444 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~ 444 (608)
.+- .++|-..+.++++++
T Consensus 85 ~~~p~~~hpM~~l~~~v~~l 104 (378)
T 1a59_A 85 DLLSTACHPMDVARTAVSVL 104 (378)
T ss_dssp TTSCTTSCHHHHHHHHHHHH
T ss_pred HhCCCCCCcHHHHHHHHHHH
Confidence 232 356666666666665
No 110
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=94.11 E-value=0.048 Score=57.50 Aligned_cols=108 Identities=16% Similarity=0.105 Sum_probs=73.7
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+.|+.++.+-++..|.-+. .-+.. ..++.
T Consensus 7 g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~~~~---~lp~~--~~~~~ 80 (363)
T 2c6x_A 7 GITCVETSISHIDGEKGRLIYRGHHAKDIALNH-SFEEAAYLILFGKLPSTEELQVFKDKLAAER---NLPEH--IERLI 80 (363)
T ss_dssp TCCCEEESSEEEETTTTEEEETTEEHHHHHHHS-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHHH
Confidence 445566777766664 5999999999999988 9999999999999999888888888766543 22222 22232
Q ss_pred c--cCCCChHHHHHHhhhccCC-CC--cCccHHHHHHHHHH
Q 007327 427 A--RAGKDLVSSLVSGLLTIGP-RF--GGAIDDAARYFKDA 462 (608)
Q Consensus 427 a--St~a~~~~av~agl~a~Gp-~h--GGa~~~a~~~l~~~ 462 (608)
. -..++|-..+.+++++++. .. -...+.+++++.++
T Consensus 81 ~~~p~~~hpM~~l~~~v~~l~~~~~~~~~~~~~a~~Lia~~ 121 (363)
T 2c6x_A 81 QSLPNNMDDMSVLRTVVSALGENTYTFHPKTEEAIRLIAIT 121 (363)
T ss_dssp HHSCSSSCHHHHHHHHHHHHCCSSCCSSCCHHHHHHHHHHH
T ss_pred HhCcccCCchHHHHHHHHhhcCCCCChHHHHHHHHHHHHHH
Confidence 2 2346777777777777753 11 11234566776654
No 111
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=94.06 E-value=0.13 Score=52.42 Aligned_cols=110 Identities=9% Similarity=0.031 Sum_probs=68.2
Q ss_pred cEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEeccC
Q 007327 11 TQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 88 (608)
Q Consensus 11 s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp~ 88 (608)
.|++|| |..|. ..+||++.||. |.+.| .... ..+.+ .-.|.....|+.|+.. +.|++++++|.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~-------V~v~d-r~~~-~~~~l---~~~G~~~~~s~~e~~~---~~dvvi~~l~~ 71 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYE-------LVVWN-RTAS-KAEPL---TKLGATVVENAIDAIT---PGGIVFSVLAD 71 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCE-------EEEC---------CTT---TTTTCEECSSGGGGCC---TTCEEEECCSS
T ss_pred cEEEEecHHHHHHHHHHHHHCCCe-------EEEEe-CCHH-HHHHH---HHcCCeEeCCHHHHHh---cCCceeeeccc
Confidence 488886 55555 88999999885 44444 3221 11111 1246778889999754 47999999998
Q ss_pred hhcHHHHHH--HhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 89 RSAAASSMA--ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 89 ~~~~~~~le--~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
...+.+++. .....+-..++|-.+-......+++.+.++++|++++.
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceec
Confidence 765554321 11112233456655556666788888999999988663
No 112
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=93.96 E-value=0.22 Score=50.91 Aligned_cols=109 Identities=10% Similarity=0.030 Sum_probs=72.6
Q ss_pred cEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEeccC
Q 007327 11 TQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSF 88 (608)
Q Consensus 11 s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp~ 88 (608)
.|.+|| |..|. ..+||++.||. |.+.| .... ..+.+ .-.|.....|++|+.. ..|++++|+|.
T Consensus 5 kIgfIGlG~MG~~mA~~L~~~G~~-------v~v~d-r~~~-~~~~l---~~~Ga~~a~s~~e~~~---~~dvv~~~l~~ 69 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLLKAGYL-------LNVFD-LVQS-AVDGL---VAAGASAARSARDAVQ---GADVVISMLPA 69 (300)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCE-------EEEEC-SSHH-HHHHH---HHTTCEECSSHHHHHT---TCSEEEECCSC
T ss_pred EEEEeeehHHHHHHHHHHHhCCCe-------EEEEc-CCHH-HHHHH---HHcCCEEcCCHHHHHh---cCCceeecCCc
Confidence 578886 55555 88999999875 44555 3221 11111 1246778889999865 47999999999
Q ss_pred hhcHHHHHHHhc----CCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 89 RSAAASSMAALK----QPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 89 ~~~~~~~le~~~----~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
...+.+++.... ...-..++|-.+=......+++.+.++++|++++
T Consensus 70 ~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~l 119 (300)
T 3obb_A 70 SQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAML 119 (300)
T ss_dssp HHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 887777765421 1112345555555666678889999999998865
No 113
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=93.80 E-value=0.12 Score=55.62 Aligned_cols=119 Identities=13% Similarity=0.038 Sum_probs=72.1
Q ss_pred CCCcEEEEEcCC---chHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCce--eec---ccccC----CHHHHhhc
Q 007327 8 SKTTQALFYNYK---QLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQE--EIA---IPVHS----TVEAACAA 75 (608)
Q Consensus 8 ~p~s~avv~g~~---~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~e--v~G---~~~y~----sv~~i~~~ 75 (608)
++..++|| |.+ ..+++.+.+.. +.++++.++ +.... ...+ .++ -.| .++|. +++|++..
T Consensus 19 ~~~rvgiI-G~G~~g~~h~~~l~~~~-----~~~lvav~d-~~~~~-~~~~-a~~~~~~g~~~~~~~~~~~~~~~~ll~~ 89 (444)
T 2ixa_A 19 KKVRIAFI-AVGLRGQTHVENMARRD-----DVEIVAFAD-PDPYM-VGRA-QEILKKNGKKPAKVFGNGNDDYKNMLKD 89 (444)
T ss_dssp CCEEEEEE-CCSHHHHHHHHHHHTCT-----TEEEEEEEC-SCHHH-HHHH-HHHHHHTTCCCCEEECSSTTTHHHHTTC
T ss_pred CCceEEEE-ecCHHHHHHHHHHHhCC-----CcEEEEEEe-CCHHH-HHHH-HHHHHhcCCCCCceeccCCCCHHHHhcC
Confidence 34578888 443 23778777653 334565555 42220 0000 000 023 57898 99998764
Q ss_pred CCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 76 HPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 76 ~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
+++|+++|++|.....+.+++++. +|. .+++=- -.....+.++|.+.|+++|.. .+|-|+
T Consensus 90 -~~vD~V~i~tp~~~h~~~~~~al~-aGk-hV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 151 (444)
T 2ixa_A 90 -KNIDAVFVSSPWEWHHEHGVAAMK-AGK-IVGMEVSGAITLEECWDYVKVSEQTGVPLMALENV 151 (444)
T ss_dssp -TTCCEEEECCCGGGHHHHHHHHHH-TTC-EEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred -CCCCEEEEcCCcHHHHHHHHHHHH-CCC-eEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEecc
Confidence 369999999999876666666555 775 444411 123344678999999999976 456554
No 114
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.71 E-value=0.18 Score=50.77 Aligned_cols=110 Identities=8% Similarity=-0.012 Sum_probs=64.3
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
++++++||| |..|. +.+++.+.|+. |..++ +... ....+.. .|+..+.+..++.. +.|+++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~-------V~~~~-~~~~-~~~~~~~---~g~~~~~~~~~~~~---~~D~vi~~ 67 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVT-------VYAFD-LMEA-NVAAVVA---QGAQACENNQKVAA---ASDIIFTS 67 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCE-------EEEEC-SSHH-HHHHHHT---TTCEECSSHHHHHH---HCSEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCe-------EEEEe-CCHH-HHHHHHH---CCCeecCCHHHHHh---CCCEEEEE
Confidence 357899996 34444 77888887653 44555 3221 0011111 16778889988765 37999999
Q ss_pred ccChhcHHHHHH---Hh---cCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 86 SSFRSAAASSMA---AL---KQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 86 vp~~~~~~~~le---~~---~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
+|....+..++. .+ ...| +.+|-+++|.++ ..+++.+.+++.|++++
T Consensus 68 vp~~~~~~~v~~~~~~l~~~l~~~-~~vv~~~~~~~~-~~~~l~~~~~~~g~~~~ 120 (301)
T 3cky_A 68 LPNAGIVETVMNGPGGVLSACKAG-TVIVDMSSVSPS-STLKMAKVAAEKGIDYV 120 (301)
T ss_dssp CSSHHHHHHHHHSTTCHHHHSCTT-CEEEECCCCCHH-HHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHcCcchHhhcCCCC-CEEEECCCCCHH-HHHHHHHHHHHcCCeEE
Confidence 987655666663 22 1123 234445566643 34566666766677765
No 115
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.43 E-value=0.12 Score=53.11 Aligned_cols=112 Identities=8% Similarity=0.027 Sum_probs=69.5
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCC-CCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGA-EGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~-~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
++|+||| |..|. +.++|.+.||. .|..++ ... ....+.+ .-.|+..+.|+.|+.. +.|+++++|
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~------~V~~~d-r~~~~~~~~~~---~~~g~~~~~~~~e~~~---~aDvVi~~v 91 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAI------DMAAYD-AASAESWRPRA---EELGVSCKASVAEVAG---ECDVIFSLV 91 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC------EEEEEC-SSCHHHHHHHH---HHTTCEECSCHHHHHH---HCSEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCC------eEEEEc-CCCCHHHHHHH---HHCCCEEeCCHHHHHh---cCCEEEEec
Confidence 5788885 33333 88889888761 255666 421 1000000 1246778889998766 379999999
Q ss_pred cChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhC--CCeEEc
Q 007327 87 SFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSN--NKVVIG 135 (608)
Q Consensus 87 p~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~--g~rvlG 135 (608)
|....+ .+++.+.. ..-+.+||-.+.......+++.+..++. |++++.
T Consensus 92 p~~~~~-~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd 142 (312)
T 3qsg_A 92 TAQAAL-EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA 142 (312)
T ss_dssp CTTTHH-HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CchhHH-HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe
Confidence 998644 45565543 2234566666667766677777777776 666554
No 116
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.41 E-value=0.22 Score=54.63 Aligned_cols=117 Identities=10% Similarity=0.033 Sum_probs=68.3
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev--~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
.+|+||| |..|. +.++|.+.||. |...+ .... ....+...+. .|+....+++|+.....+.|+++++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~-------V~v~d-r~~~-~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~ 81 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFT-------VCAYN-RTQS-KVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLL 81 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSSH-HHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEEC
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEE
Confidence 3688885 33333 88899998864 55555 3221 0111100000 4677888999876531127999999
Q ss_pred ccChhcHHHHHHHhcCC-CCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 86 SSFRSAAASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~-gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
||+...+.++++.+... .-..+||-.+.......+++.+.+++.|+++++
T Consensus 82 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 82 VKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp CCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeC
Confidence 99965578888877532 112344433333333445566667777877664
No 117
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=93.32 E-value=0.15 Score=45.30 Aligned_cols=86 Identities=10% Similarity=0.035 Sum_probs=52.5
Q ss_pred CCcEEEEEcCCch---HHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHh---hcCCCccE
Q 007327 9 KTTQALFYNYKQL---PIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAAC---AAHPMADV 81 (608)
Q Consensus 9 p~s~avv~g~~~~---~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~---~~~p~vDl 81 (608)
.+.++|+ |+++. +++.+.+. +| .+++.+. +... ..|..+.|+|+|. ++++. ... ++|.
T Consensus 4 ~~~vlIi-GaG~~g~~l~~~l~~~~g~------~vvg~~d-~~~~-----~~g~~i~g~pV~g-~~~l~~~~~~~-~id~ 68 (141)
T 3nkl_A 4 KKKVLIY-GAGSAGLQLANMLRQGKEF------HPIAFID-DDRK-----KHKTTMQGITIYR-PKYLERLIKKH-CIST 68 (141)
T ss_dssp CEEEEEE-CCSHHHHHHHHHHHHSSSE------EEEEEEC-SCGG-----GTTCEETTEEEEC-GGGHHHHHHHH-TCCE
T ss_pred CCEEEEE-CCCHHHHHHHHHHHhCCCc------EEEEEEE-CCcc-----cCCCEecCeEEEC-HHHHHHHHHHC-CCCE
Confidence 3455666 65544 66666654 44 4666665 3221 1235688889886 55543 333 4899
Q ss_pred EEEeccCh--hcHHHHHHHhcCCCCCEEEE
Q 007327 82 FINFSSFR--SAAASSMAALKQPTIRVVAI 109 (608)
Q Consensus 82 avi~vp~~--~~~~~~le~~~~~gv~~~vi 109 (608)
++|++|.. .....+++.|.+.|++..++
T Consensus 69 viia~~~~~~~~~~~i~~~l~~~gv~v~~v 98 (141)
T 3nkl_A 69 VLLAVPSASQVQKKVIIESLAKLHVEVLTI 98 (141)
T ss_dssp EEECCTTSCHHHHHHHHHHHHTTTCEEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCeEEEC
Confidence 99999853 23457788888888874443
No 118
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.25 E-value=0.34 Score=49.28 Aligned_cols=112 Identities=13% Similarity=0.017 Sum_probs=66.0
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
+++++||| |..|. +.+++.+.|+. |..++ +... ....+. -.|+..+.+..++.. +.|+++++|
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~-------V~~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~DvVi~av 94 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHT-------VTVWN-RTAE-KCDLFI---QEGARLGRTPAEVVS---TCDITFACV 94 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSGG-GGHHHH---HTTCEECSCHHHHHH---HCSEEEECC
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCE-------EEEEe-CCHH-HHHHHH---HcCCEEcCCHHHHHh---cCCEEEEeC
Confidence 36799995 22233 77788887653 55555 3222 111110 136677888888665 379999999
Q ss_pred cChhcHHHHHHHhc----CCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 87 SFRSAAASSMAALK----QPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 87 p~~~~~~~~le~~~----~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
|....+..+++... ...-+.+||..+.......+++.+.+.+.+.++++
T Consensus 95 ~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~ 147 (316)
T 2uyy_A 95 SDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLE 147 (316)
T ss_dssp SSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 95444667766431 12223455545555555566777777677777664
No 119
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=93.16 E-value=0.043 Score=58.19 Aligned_cols=108 Identities=12% Similarity=0.110 Sum_probs=70.9
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+.|++++.+.+..-|. +|..-+.. ..++.
T Consensus 10 gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~feeva~LL~~G~lPt~~el~~f~~~l~---~~~~lp~~--~~~~~ 83 (377)
T 1o7x_A 10 NVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYG-SYEETIYLMLYGKLPTKKELNDLKAKLN---EEYEVPQE--VLDTI 83 (377)
T ss_dssp TCEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEECCccHHHHHcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 445667778777664 5999999999999998 9999999999999998888888887554 44433333 22232
Q ss_pred c--cCCCChHHHHHHhhhccC---CCC---cCccHHHHHHHHHH
Q 007327 427 A--RAGKDLVSSLVSGLLTIG---PRF---GGAIDDAARYFKDA 462 (608)
Q Consensus 427 a--St~a~~~~av~agl~a~G---p~h---GGa~~~a~~~l~~~ 462 (608)
. -..++|-..+.+++++++ |.. -...+.+++++.++
T Consensus 84 ~~~p~~~hpM~~l~~~v~~l~~~~~~~~~~~~~~~~a~~Lia~~ 127 (377)
T 1o7x_A 84 YLMPKEADAIGLLEVGTAALASIDKNFKWKENDKEKAISIIAKM 127 (377)
T ss_dssp HHSCTTSCHHHHHHHHHHHHHHHCCCCCSSSSHHHHHHHHHHHH
T ss_pred HhCcccCCcHHHHHHHHHHHhhcCCCcCCHHHHHHHHHHHHHHH
Confidence 2 223566666666666643 321 11234466666554
No 120
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.11 E-value=0.22 Score=50.12 Aligned_cols=109 Identities=10% Similarity=0.081 Sum_probs=62.8
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++++||| |..|. +.+++.+.|+. |..++ +... ..+.+. -.|+..+.+++++.. +.|++++++|
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~-------V~~~~-~~~~-~~~~~~---~~g~~~~~~~~~~~~---~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYS-------LVVSD-RNPE-AIADVI---AAGAETASTAKAIAE---QCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCE-------EEEEC-SCHH-HHHHHH---HTTCEECSSHHHHHH---HCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHHHhCCCE-------EEEEe-CCHH-HHHHHH---HCCCeecCCHHHHHh---CCCEEEEECC
Confidence 5788886 34444 77788887653 55555 3221 001110 126778889988765 3799999999
Q ss_pred ChhcHHHHH---HHh---cCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 88 FRSAAASSM---AAL---KQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 88 ~~~~~~~~l---e~~---~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
....+..++ +.+ ...|. .+|-+++|.+ ...++|.+.+.+.|+.+++
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~-~vv~~s~~~~-~~~~~l~~~~~~~g~~~~~ 122 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGT-VLIDMSSIAP-LASREISDALKAKGVEMLD 122 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTC-EEEECSCCCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHhCcchHhhcCCCCC-EEEECCCCCH-HHHHHHHHHHHHcCCeEEE
Confidence 655466665 222 22232 3333445544 3455677777766666554
No 121
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=93.10 E-value=0.11 Score=50.74 Aligned_cols=66 Identities=18% Similarity=0.052 Sum_probs=46.4
Q ss_pred CCCcEEEEeC-CCCCCccccccCceeecccccC--CHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecC
Q 007327 36 ETPSVAGIIN-PGAEGFQKLFFGQEEIAIPVHS--TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 36 g~~~v~~v~~-p~~~~~~~~~~g~ev~G~~~y~--sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~ 112 (608)
|..+|+.++. |.+. |..+.|+|++. ++.++... . |.++|++|... ...+.+.|.+.|++.++.++.
T Consensus 110 g~~iVg~~D~dp~k~-------g~~i~gv~V~~~~dl~eli~~--~-D~ViIAvPs~~-~~ei~~~l~~aGi~~Ilnf~P 178 (215)
T 2vt3_A 110 NTKISMAFDINESKI-------GTEVGGVPVYNLDDLEQHVKD--E-SVAILTVPAVA-AQSITDRLVALGIKGILNFTP 178 (215)
T ss_dssp -CCEEEEEESCTTTT-------TCEETTEEEEEGGGHHHHCSS--C-CEEEECSCHHH-HHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEEEeCCHHHH-------HhHhcCCeeechhhHHHHHHh--C-CEEEEecCchh-HHHHHHHHHHcCCCEEEEcCc
Confidence 4457777762 3332 35788888764 44554432 3 99999999865 568889999999999998774
No 122
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.91 E-value=0.25 Score=54.07 Aligned_cols=118 Identities=14% Similarity=0.065 Sum_probs=69.3
Q ss_pred CcEEEEE-cCCc-hHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQ-LPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~-~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G--~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
++|+||| |..| .+.++|.+.||. |.+.+ .... ....+......| +..+.|++|+.....+.|+++++
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~-------V~v~d-r~~~-~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFV-------VCAFN-RTVS-KVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSTH-HHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEEC
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEe
Confidence 5788885 3223 388899999864 55665 4221 111110000112 33468899876532137999999
Q ss_pred ccChhcHHHHHHHhcCC-CCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcC
Q 007327 86 SSFRSAAASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~-gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGP 136 (608)
||+...+..+++.+... .-..+||-.+.-...+..++.+..++.|+++++.
T Consensus 76 Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~ 127 (484)
T 4gwg_A 76 VKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS 127 (484)
T ss_dssp SCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC
Confidence 99975577787776532 2234455444444445556667777788877653
No 123
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=92.88 E-value=0.27 Score=47.83 Aligned_cols=67 Identities=9% Similarity=-0.028 Sum_probs=47.5
Q ss_pred CCCcEEEEeC-CCCCCccccccCceeeccccc--CCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecC
Q 007327 36 ETPSVAGIIN-PGAEGFQKLFFGQEEIAIPVH--STVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 36 g~~~v~~v~~-p~~~~~~~~~~g~ev~G~~~y--~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~ 112 (608)
|.++|+.++. |.+. |..+.|+|++ .++.++... ++|.++|++|... ...+.+.|.++|++.++.++.
T Consensus 104 g~~iVg~~D~dp~k~-------g~~i~gv~V~~~~dl~ell~~--~ID~ViIA~Ps~~-~~ei~~~l~~aGi~~Ilnf~P 173 (211)
T 2dt5_A 104 SFELRGFFDVDPEKV-------GRPVRGGVIEHVDLLPQRVPG--RIEIALLTVPREA-AQKAADLLVAAGIKGILNFAP 173 (211)
T ss_dssp SEEEEEEEESCTTTT-------TCEETTEEEEEGGGHHHHSTT--TCCEEEECSCHHH-HHHHHHHHHHHTCCEEEECSS
T ss_pred CcEEEEEEeCCHHHH-------hhhhcCCeeecHHhHHHHHHc--CCCEEEEeCCchh-HHHHHHHHHHcCCCEEEECCc
Confidence 3457777762 3333 3567788864 456665543 4899999999875 568889999999999988663
No 124
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.83 E-value=0.22 Score=54.16 Aligned_cols=115 Identities=13% Similarity=0.007 Sum_probs=66.1
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev--~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+.|+||| |..|. +.++|.+.||. |..++ +... ....+. ++. .|+..+.+++|+.....++|+++++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~-------V~v~d-r~~~-~~~~l~-~~~~~~gi~~~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYT-------VAIYN-RTTS-KTEEVF-KEHQDKNLVFTKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSHH-HHHHHH-HHTTTSCEEECSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCE-------EEEEc-CCHH-HHHHHH-HhCcCCCeEEeCCHHHHHhhccCCCEEEEE
Confidence 5789996 33333 88899888763 55665 3221 001110 000 2677888999876531137999999
Q ss_pred ccChhcHHHHHHHhcC-CCCCEEEE-ecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 86 SSFRSAAASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 86 vp~~~~~~~~le~~~~-~gv~~~vi-is~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
||+...+..+++.+.. ..-+.+|| .+.|.++ ..+++.+.+++.|+++++
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~-~~~~l~~~l~~~g~~~v~ 126 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFP-DTMRRNAELADSGINFIG 126 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHH-HHHHHHHHTTTSSCEEEE
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHH-HHHHHHHHHHHCCCeEEC
Confidence 9996557778776642 11123343 3445433 445555666666776653
No 125
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=92.78 E-value=0.052 Score=57.42 Aligned_cols=90 Identities=11% Similarity=0.092 Sum_probs=63.4
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+-|+.++.+-++..|. .|..-+.. ..++.
T Consensus 7 g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~-~fEeva~LLl~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~ 80 (371)
T 1aj8_A 7 DVYIDQTNICYIDGKEGKLYYRGYSVEELAELS-TFEEVVYLLWWGKLPSLSELENFKKELA---KSRGLPKE--VIEIM 80 (371)
T ss_dssp TCEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TTCCCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 445567778766664 5999999999999988 9999999999999998888888887654 44433333 22233
Q ss_pred cc--CCCChHHHHHHhhhcc
Q 007327 427 AR--AGKDLVSSLVSGLLTI 444 (608)
Q Consensus 427 aS--t~a~~~~av~agl~a~ 444 (608)
.+ ..++|-..+.++++++
T Consensus 81 ~~~p~~~hpM~~l~~~v~~l 100 (371)
T 1aj8_A 81 EALPKNTHPMGALRTIISYL 100 (371)
T ss_dssp HHSCTTCCHHHHHHHHHHHH
T ss_pred HhCCCCCChHHHHHHHHHHH
Confidence 23 2356666666666554
No 126
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=92.72 E-value=0.064 Score=57.87 Aligned_cols=97 Identities=12% Similarity=0.010 Sum_probs=69.2
Q ss_pred cccCCcchhhhheeccCCCC-cccCCCCCCcccccC--------CcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCC
Q 007327 345 GKVRAPTHIISTISDDRGEE-PCYAGVPMSSIVEQG--------YGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGP 415 (608)
Q Consensus 345 A~~p~i~A~~t~I~~~~g~~-i~~~g~dl~~li~~~--------~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl 415 (608)
.-+..+.+..|+||.-.|+. +.||||++.||.++. .+|++++|+||+|+.|++++.+.++..|.-+. .
T Consensus 41 ~Gl~g~~~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~---~ 117 (435)
T 1csh_A 41 GGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRA---A 117 (435)
T ss_dssp TTTTTCCCCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHC---C
T ss_pred cCcCCCeeeeeeeeEEcCCCCeeECCccHHHHHhhCcccccCCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHcc---C
Confidence 33555667788888776544 899999999998764 15999999999999999989888888766554 2
Q ss_pred CCccchhhhhhcc--CCCChHHHHHHhhhccCC
Q 007327 416 CVSGAHNTIVTAR--AGKDLVSSLVSGLLTIGP 446 (608)
Q Consensus 416 ~~st~~aar~~aS--t~a~~~~av~agl~a~Gp 446 (608)
-+.. +..+..+ ..++|-..+.+++++++.
T Consensus 118 lp~~--v~~~i~~~p~~~hPM~~l~~~v~aL~~ 148 (435)
T 1csh_A 118 LPSH--VVTMLDNFPTNLHPMSQLSAAITALNS 148 (435)
T ss_dssp CCHH--HHHHHHHSCTTSCHHHHHHHHHHHGGG
T ss_pred CCHH--HHHHHHhCCccCChHHHHHHHHHHHhh
Confidence 2222 3334333 345777777777777754
No 127
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=92.66 E-value=0.058 Score=57.24 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=71.0
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+-|+.++.+.++..|. +|..-+.. ..++.
T Consensus 11 gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~-~fEeva~LL~~G~lP~~~el~~f~~~l~---~~~~lp~~--~~~~~ 84 (378)
T 1vgm_A 11 NVIIKTTGLTYIDGINGILRYRGYDINDLVNYA-SYEELIHLMLYGELPNRQQLNQIKGIIN---ESFEVPEQ--VISTI 84 (378)
T ss_dssp TCEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHH---TCCCCCHH--HHHHH
T ss_pred CCeeeeeeceEEECCCCeEEEcCeeHHHHHhcC-CHHHHHHHHHcCCCCCHHHHHHHHHHHH---HccCCCHH--HHHHH
Confidence 445667778777664 5999999999999988 9999999999999998888888887655 44433333 22233
Q ss_pred ccC--CCChHHHHHHhhhccC---CC---CcCccHHHHHHHHHH
Q 007327 427 ARA--GKDLVSSLVSGLLTIG---PR---FGGAIDDAARYFKDA 462 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~G---p~---hGGa~~~a~~~l~~~ 462 (608)
.+- .++|-..+.+++++++ |. .-...+.+++++.++
T Consensus 85 ~~~p~~~hpM~~l~~~v~~l~~~~~~~~~~~~~~~~a~~Lia~~ 128 (378)
T 1vgm_A 85 FSMPRNCDAIGMMETAFGILASIYDPKWNRATNKELAVQIIAKT 128 (378)
T ss_dssp TTSCTTSCHHHHHHHHHHHHHHHHCCCCCTTTHHHHHHHHHHHH
T ss_pred HhCCCCCCcHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHH
Confidence 222 3566666666666543 21 111234466666554
No 128
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=92.41 E-value=0.12 Score=53.86 Aligned_cols=108 Identities=16% Similarity=0.134 Sum_probs=66.6
Q ss_pred CCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
-++-+++.||| |..|+ +.+.+..+|+. |.+.+ +... ...|...+.+++++.. +.|+++
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~-------V~~~d-r~~~---------~~~g~~~~~~l~ell~---~aDvVi 220 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCP-------ISYFS-RSKK---------PNTNYTYYGSVVELAS---NSDILV 220 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCC-------EEEEC-SSCC---------TTCCSEEESCHHHHHH---TCSEEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCE-------EEEEC-CCch---------hccCceecCCHHHHHh---cCCEEE
Confidence 35667899995 33333 77888877653 55666 4322 1225566788988766 479999
Q ss_pred EeccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcC
Q 007327 84 NFSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 84 i~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGP 136 (608)
+++|..... ...++.+. .| .++|-++--...++++|.+..++.+++-.|-
T Consensus 221 l~vP~~~~t~~li~~~~l~~mk-~g--ailIn~srG~~vd~~aL~~aL~~g~i~ga~l 275 (333)
T 3ba1_A 221 VACPLTPETTHIINREVIDALG-PK--GVLINIGRGPHVDEPELVSALVEGRLGGAGL 275 (333)
T ss_dssp ECSCCCGGGTTCBCHHHHHHHC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSCEEEE
T ss_pred EecCCChHHHHHhhHHHHhcCC-CC--CEEEECCCCchhCHHHHHHHHHcCCCeEEEE
Confidence 999975322 23445443 33 3444444334447788888888877765553
No 129
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=92.34 E-value=0.079 Score=57.35 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=46.9
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
.++|.+.+++... +++|++++++|... ..+.+++++. +|. .+++..-......-++|.+.|+++|+.+.-
T Consensus 93 ~~v~~D~eeLL~d-~dIDaVviaTp~p~~H~e~a~~AL~-AGK-HVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~ 163 (446)
T 3upl_A 93 IAVTDDNDLILSN-PLIDVIIDATGIPEVGAETGIAAIR-NGK-HLVMMNVEADVTIGPYLKAQADKQGVIYSL 163 (446)
T ss_dssp EEEESCHHHHHTC-TTCCEEEECSCCHHHHHHHHHHHHH-TTC-EEEECCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred ceEECCHHHHhcC-CCCCEEEEcCCChHHHHHHHHHHHH-cCC-cEEecCcccCHHHHHHHHHHHHHhCCeeee
Confidence 5689999998864 36999999998642 2455666665 675 455433211112457999999999877543
No 130
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.33 E-value=0.35 Score=52.72 Aligned_cols=116 Identities=16% Similarity=0.087 Sum_probs=65.9
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCcee--ecccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE--IAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev--~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+.|+||| |..|. +.++|.+.||. |..++ .... ....+...+. .|+..+.+++++.....++|+++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~-------V~v~d-r~~~-~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVila 73 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFV-------VCAFN-RTVS-KVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILL 73 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSTH-HHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEEC
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCe-------EEEEe-CCHH-HHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEe
Confidence 5789995 33333 78889888763 55665 3221 1111100000 4677888999876411137999999
Q ss_pred ccChhcHHHHHHHhcC-CCCCEEEE-ecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 86 SSFRSAAASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 86 vp~~~~~~~~le~~~~-~gv~~~vi-is~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
||+...+..+++.+.. ..-..+|| .+.|.++ ..+++.+...+.|+.+++
T Consensus 74 Vp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~-~~~~l~~~l~~~g~~~v~ 124 (482)
T 2pgd_A 74 VKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYR-DTMRRCRDLKDKGILFVG 124 (482)
T ss_dssp SCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHHTTCEEEE
T ss_pred CCChHHHHHHHHHHHhhcCCCCEEEECCCCCHH-HHHHHHHHHHHcCCeEeC
Confidence 9996457777775542 11123444 3445543 344556666667777653
No 131
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=92.10 E-value=0.08 Score=56.28 Aligned_cols=90 Identities=8% Similarity=0.013 Sum_probs=63.0
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccc-cCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVE-QGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIV 425 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~-~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~ 425 (608)
.+.+..|+||.-.|+ .+.|||+++.||.+ +. +|+++.|+||+|+-|+.++.+-++.-|.-+. .-+.. ..++
T Consensus 13 g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~~---~lp~~--~~~~ 86 (385)
T 2ifc_A 13 DVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGA-QDEEIQYLFLYGNLPTEQELRKYKETVQKGY---KIPDF--VINA 86 (385)
T ss_dssp TCEEEEESSEEEETTTTEEEETTEEHHHHHHTTC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHGGG---CCCHH--HHHH
T ss_pred CCeeeeeeCeEEECCCCEEEECCccHHHHHhcCC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHH
Confidence 455667778777664 59999999999998 77 9999999999999999888888887666443 22222 2223
Q ss_pred hcc--CCCChHHHHHHhhhcc
Q 007327 426 TAR--AGKDLVSSLVSGLLTI 444 (608)
Q Consensus 426 ~aS--t~a~~~~av~agl~a~ 444 (608)
..+ ..++|-..+.++++++
T Consensus 87 ~~~~p~~~hpM~~l~~~v~~l 107 (385)
T 2ifc_A 87 IRQLPRESDAVAMQMAAVAAM 107 (385)
T ss_dssp HHTSCTTSCHHHHHHHHHHHH
T ss_pred HHhCCCCCCchHHHHHHHHHH
Confidence 322 2356666666666554
No 132
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.06 E-value=0.31 Score=53.13 Aligned_cols=116 Identities=12% Similarity=0.007 Sum_probs=64.6
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc---cCc--eeecccccCCHHHHhhcCCCccEE
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF---FGQ--EEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~---~g~--ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
+.|+||| |..|. +.++|.+.||. |..++ .... ....+ .|. +-.++..+.+++|+.....++|++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~-------V~v~d-r~~~-~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvV 72 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFK-------VAVFN-RTYS-KSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKA 72 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SSHH-HHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEE
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEE
Confidence 5789996 33333 88889888763 55665 3211 00011 010 001266788898876531127999
Q ss_pred EEeccChhcHHHHHHHhcC-CCCCEEEE-ecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 83 INFSSFRSAAASSMAALKQ-PTIRVVAI-IAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~-~gv~~~vi-is~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
+++||+...+..+++.+.. ..-+.+|| .+.|..+ ..+++.+.+++.|+.+++
T Consensus 73 ilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~-~~~~l~~~l~~~g~~~v~ 126 (478)
T 1pgj_A 73 LILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFK-DQGRRAQQLEAAGLRFLG 126 (478)
T ss_dssp EECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHH-HHHHHHHHHHTTTCEEEE
T ss_pred EEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChH-HHHHHHHHHHHCCCeEEE
Confidence 9999996446777765532 11123444 3445543 445555666666776553
No 133
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.03 E-value=0.21 Score=50.69 Aligned_cols=112 Identities=6% Similarity=0.015 Sum_probs=68.6
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccc-cCCHHHHhhcCCCccEEEEe
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPV-HSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~-y~sv~~i~~~~p~vDlavi~ 85 (608)
.++|+||| |..|. +.+++.+.||. |..++ .... ..+.+ .-.|... ..+++|+.. +.|+++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~-------V~~~d-r~~~-~~~~~---~~~g~~~~~~~~~e~~~---~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS-------TWGAD-LNPQ-ACANL---LAEGACGAAASAREFAG---VVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SCHH-HHHHH---HHTTCSEEESSSTTTTT---TCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe-------EEEEE-CCHH-HHHHH---HHcCCccccCCHHHHHh---cCCEEEEE
Confidence 45789995 33333 78888888764 55555 3221 00001 0124555 678887654 47999999
Q ss_pred ccChhcHHHHH---HHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 86 SSFRSAAASSM---AALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 86 vp~~~~~~~~l---e~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
||....+..++ +.+.. ..-..+||-++.......+++.+.+++.|+.++.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~ 125 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD 125 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 99865566665 33332 2234566666777777777888888887776554
No 134
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=91.69 E-value=0.091 Score=56.46 Aligned_cols=108 Identities=13% Similarity=0.062 Sum_probs=72.3
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+++..+.||.-.|+ .+.||||++.||.++. +|+++.|+||+|+.|+.++.+.++.-|.-+ ..-+.. +.++.
T Consensus 57 ~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~-~feevayLLl~G~LPt~~el~~f~~~l~~~---~~lp~~--~~~~i 130 (427)
T 3msu_A 57 STAACESKITYIDGGKGVLLHRGYPIEEWTQKS-NYRTLCYALIYGELPTDEQVKSFRQEIINK---MPVCEH--VKAAI 130 (427)
T ss_dssp TEEEEEESSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHH---CCCCHH--HHHHH
T ss_pred CceEEEEEeeEEeCCCCEEEECCeEHHHHhccC-CHHHHHHHHHcCcCCCHHHHHHHHHHHHHc---cCCCHH--HHHHH
Confidence 445566777765553 5799999999999888 999999999999988888888888866554 332333 34444
Q ss_pred ccC--CCChHHHHHHhhhccCCCC------cCccHHHHHHHHHH
Q 007327 427 ARA--GKDLVSSLVSGLLTIGPRF------GGAIDDAARYFKDA 462 (608)
Q Consensus 427 aSt--~a~~~~av~agl~a~Gp~h------GGa~~~a~~~l~~~ 462 (608)
.+- .++|-..+.+++++++..+ -...+.+++++.++
T Consensus 131 ~~~p~~~hPM~~L~~~v~aL~~~~~~~~~~~~~~~~a~rLiAk~ 174 (427)
T 3msu_A 131 AAMPQHTHPMSSLIAGVNVLAAEHIHNGQKESQDEVAKNIVAKI 174 (427)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHH
Confidence 443 3567777777777764211 11234566666654
No 135
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.68 E-value=0.53 Score=46.84 Aligned_cols=108 Identities=11% Similarity=-0.104 Sum_probs=61.9
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++++||| |..|. +.+++.+ |+. |..++ +... ....+. -.|+..+. +.++.. +.|++++++|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~-------V~~~~-~~~~-~~~~~~---~~g~~~~~-~~~~~~---~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFP-------TLVWN-RTFE-KALRHQ---EEFGSEAV-PLERVA---EARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSC-------EEEEC-SSTH-HHHHHH---HHHCCEEC-CGGGGG---GCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCe-------EEEEe-CCHH-HHHHHH---HCCCcccC-HHHHHh---CCCEEEEeCC
Confidence 4688886 44444 7788888 863 45555 3221 000110 01444454 555444 3799999999
Q ss_pred ChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 88 FRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 88 ~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
....+..+++.+.. ..-+.+|+..+.......+++.+.+++.|++++
T Consensus 65 ~~~~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~ 112 (289)
T 2cvz_A 65 TTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYL 112 (289)
T ss_dssp SHHHHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEE
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence 87546667776643 222345554455554456677777777665544
No 136
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.61 E-value=0.33 Score=49.89 Aligned_cols=109 Identities=14% Similarity=-0.004 Sum_probs=66.3
Q ss_pred CcEEEEE-cCCch-HHHHHhhCc-ccCCCCCCcEEEEeCCCCC------CccccccCceeecccccC-CHHHHhhcCCCc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFD-FLCGRETPSVAGIINPGAE------GFQKLFFGQEEIAIPVHS-TVEAACAAHPMA 79 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~-~~~~~g~~~v~~v~~p~~~------~~~~~~~g~ev~G~~~y~-sv~~i~~~~p~v 79 (608)
++|+||| |..|. +.+++.+.| |. |.+++ +... .....+ .-.|+ .. ++.|+.. +.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~-------V~~~d-r~~~~~~~~~~~~~~~---~~~g~--~~~s~~e~~~---~a 88 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAAR-------LAAYD-LRFNDPAASGALRARA---AELGV--EPLDDVAGIA---CA 88 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSE-------EEEEC-GGGGCTTTHHHHHHHH---HHTTC--EEESSGGGGG---GC
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCe-------EEEEe-CCCccccchHHHHHHH---HHCCC--CCCCHHHHHh---cC
Confidence 5688885 32333 778888887 64 55665 3220 000000 01244 55 7777655 37
Q ss_pred cEEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 80 DVFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 80 Dlavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
|+++++||....+. .++.+.. ..-..+||-+++......+++.+..++.|++++.
T Consensus 89 DvVi~avp~~~~~~-~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d 144 (317)
T 4ezb_A 89 DVVLSLVVGAATKA-VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE 144 (317)
T ss_dssp SEEEECCCGGGHHH-HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE
T ss_pred CEEEEecCCHHHHH-HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe
Confidence 99999999987544 4455542 2234566666777777778888888887776543
No 137
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.60 E-value=0.51 Score=47.49 Aligned_cols=97 Identities=11% Similarity=0.095 Sum_probs=60.2
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++++||| |..|. +.+.+.+.||. ...|..++ +.... ...+ .+-.|+.++.+..++.. +.|++|++|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~----~~~V~v~d-r~~~~-~~~l--~~~~gi~~~~~~~~~~~---~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYD----PNRICVTN-RSLDK-LDFF--KEKCGVHTTQDNRQGAL---NADVVVLAV 71 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCC----GGGEEEEC-SSSHH-HHHH--HHTTCCEEESCHHHHHS---SCSEEEECS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCC----CCeEEEEe-CCHHH-HHHH--HHHcCCEEeCChHHHHh---cCCeEEEEe
Confidence 46799995 22233 88888888762 12365666 43221 0101 01137788888888765 479999999
Q ss_pred cChhcHHHHHHHhcCC--CCC-EEEEecCCCCHH
Q 007327 87 SFRSAAASSMAALKQP--TIR-VVAIIAEGVPEA 117 (608)
Q Consensus 87 p~~~~~~~~le~~~~~--gv~-~~viis~Gf~e~ 117 (608)
|+.. +.++++++... .-+ .+|-+++|++..
T Consensus 72 ~p~~-~~~vl~~l~~~~l~~~~iiiS~~agi~~~ 104 (280)
T 3tri_A 72 KPHQ-IKMVCEELKDILSETKILVISLAVGVTTP 104 (280)
T ss_dssp CGGG-HHHHHHHHHHHHHTTTCEEEECCTTCCHH
T ss_pred CHHH-HHHHHHHHHhhccCCCeEEEEecCCCCHH
Confidence 9864 78888777532 223 455567899853
No 138
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=90.87 E-value=0.069 Score=57.18 Aligned_cols=91 Identities=15% Similarity=0.079 Sum_probs=64.1
Q ss_pred CcchhhhheeccCCC--CcccCCCCCCcccccCCcHHHHHHHhhcCCCCChhHHHHHHHHHHHhcCCCCCCccchhhhhh
Q 007327 349 APTHIISTISDDRGE--EPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTQFIEICIMLCADHGPCVSGAHNTIVT 426 (608)
Q Consensus 349 ~i~A~~t~I~~~~g~--~i~~~g~dl~~li~~~~~~~~~l~~l~~~~~~~~~~~~~l~~~lvl~aDHgl~~st~~aar~~ 426 (608)
.+.+..|+||.-.|+ .+.|||+++.||.++. +|+++.|+||+|+.|+.++.+-++..|.-+. .-+.. ...+.
T Consensus 28 gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~-~fEeva~LLl~G~lPt~~el~~f~~~l~~~~---~lp~~--~~~~~ 101 (409)
T 2ibp_A 28 DVLIKSTSISDIDGEKGILWYRGYRIEELARLS-TYEEVSYLILYGRLPTKRELEDYINRMKKYR---ELHPA--TVEVI 101 (409)
T ss_dssp TCEEEEECSEEEETTTTEEEETTEEHHHHHHHC-CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHT---SCCHH--HHHHH
T ss_pred CCeeeeeeCeEEECCCCEEEEcCccHHHHHccC-CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc---CCCHH--HHHHH
Confidence 555677888877664 5999999999999888 9999999999999999888888888766553 22222 22222
Q ss_pred ccCCC-ChHHHHHHhhhccC
Q 007327 427 ARAGK-DLVSSLVSGLLTIG 445 (608)
Q Consensus 427 aSt~a-~~~~av~agl~a~G 445 (608)
.+-.. +|-..+.+++++++
T Consensus 102 ~~~p~~hPM~~l~~~v~aL~ 121 (409)
T 2ibp_A 102 RNLAKAHPMFALEAAVAAEG 121 (409)
T ss_dssp HHTTTSCHHHHHHHHHHHHH
T ss_pred HhCCccCchHHHHHHHHHHh
Confidence 22211 66666666666654
No 139
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A*
Probab=90.86 E-value=0.52 Score=50.67 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=76.2
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC--ceeEEeecCCCCCCCC-CHHH----HHHHhhcCCCccEEEEEEecCCcc--
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTD--GIYEGIAIGGDVFPGS-TLSD----HILRFNNIPQVKMMVVLGELGGRD-- 236 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~--G~s~~vs~Gn~~~~dv-~~~d----~l~~l~~Dp~T~~I~ly~E~g~~~-- 236 (608)
..|+|+.+...++++...+|.....|- -...|..+|+.+ .. .+.+ .++.+..||++|+|++-+=-|+.+
T Consensus 271 ldG~Ig~mvNGaGlamat~D~i~~~Gg~~~pANflD~gG~a--~~e~v~~~~~~~l~ii~~d~~vk~i~vnIfGGI~~cd 348 (425)
T 3mwd_A 271 PKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAP--SEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFT 348 (425)
T ss_dssp TTCSEEECCBSHHHHHHHHHHHHHTTCGGGBCEEEEEESCC--CHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSS
T ss_pred cCCeEEEEecCchHHHHHHHHHHHcCCCcCCcceEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCcccHH
Confidence 479999999999999999999999988 579999999988 32 2333 478888999999999877734433
Q ss_pred --H---HHHHHHHHhC-----CCCCCEEEEEeCCCcc
Q 007327 237 --E---YSLVEALKQG-----KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 237 --~---~~f~~~~r~a-----~~~KPVvvlk~Grs~~ 263 (608)
. +-..+++++. ..++|||+-..|.+..
T Consensus 349 ~vA~t~~GIi~A~~~~~~~~~~~~~PivVRl~Gtn~~ 385 (425)
T 3mwd_A 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQ 385 (425)
T ss_dssp CHHHHHHHHHHHHHHTHHHHHHTTEEEEEECBSTTHH
T ss_pred HHHHHHhHHHHHHHHhhhccccCCCcEEEECCcCCHH
Confidence 3 4566788875 3689999988887764
No 140
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=90.45 E-value=0.51 Score=49.40 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=53.2
Q ss_pred eccc-ccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCC
Q 007327 61 IAIP-VHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPA 137 (608)
Q Consensus 61 ~G~~-~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPN 137 (608)
.|++ +|.+++|++.. +++|+++|++|.....+.+++++ ++|.. +++= .-.....+.++|.+.|+++|+. .+|.|
T Consensus 66 ~~~~~~~~~~~~ll~~-~~iD~V~i~tp~~~h~~~~~~al-~~Gk~-V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~ 142 (383)
T 3oqb_A 66 FNIARWTTDLDAALAD-KNDTMFFDAATTQARPGLLTQAI-NAGKH-VYCEKPIATNFEEALEVVKLANSKGVKHGTVQD 142 (383)
T ss_dssp TTCCCEESCHHHHHHC-SSCCEEEECSCSSSSHHHHHHHH-TTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG
T ss_pred hCCCcccCCHHHHhcC-CCCCEEEECCCchHHHHHHHHHH-HCCCe-EEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 5674 89999999875 36999999999977555555555 47854 4431 1134555788999999999985 45655
Q ss_pred c
Q 007327 138 T 138 (608)
Q Consensus 138 c 138 (608)
.
T Consensus 143 ~ 143 (383)
T 3oqb_A 143 K 143 (383)
T ss_dssp G
T ss_pred c
Confidence 3
No 141
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.18 E-value=0.87 Score=44.64 Aligned_cols=91 Identities=10% Similarity=0.090 Sum_probs=57.7
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++|+||| |.-|. +.+++.+.|+. ....|..++ +... . .|+..+.+..++.. +.|+++++|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~---~~~~v~~~~-~~~~---------~-~g~~~~~~~~~~~~---~~D~vi~~v 66 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANII---KKENLFYYG-PSKK---------N-TTLNYMSSNEELAR---HCDIIVCAV 66 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSS---CGGGEEEEC-SSCC---------S-SSSEECSCHHHHHH---HCSEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCC---CCCeEEEEe-CCcc---------c-CceEEeCCHHHHHh---cCCEEEEEe
Confidence 46799996 22233 77778777621 001355555 4322 1 46777888887655 379999999
Q ss_pred cChhcHHHHHHHhcCC-CCCEEEEecCCCCHH
Q 007327 87 SFRSAAASSMAALKQP-TIRVVAIIAEGVPEA 117 (608)
Q Consensus 87 p~~~~~~~~le~~~~~-gv~~~viis~Gf~e~ 117 (608)
|+.. +.++++.+... .-+.+|..++|++..
T Consensus 67 ~~~~-~~~v~~~l~~~l~~~~vv~~~~gi~~~ 97 (262)
T 2rcy_A 67 KPDI-AGSVLNNIKPYLSSKLLISICGGLNIG 97 (262)
T ss_dssp CTTT-HHHHHHHSGGGCTTCEEEECCSSCCHH
T ss_pred CHHH-HHHHHHHHHHhcCCCEEEEECCCCCHH
Confidence 9864 78888877532 223466678899864
No 142
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=89.96 E-value=0.97 Score=46.81 Aligned_cols=152 Identities=17% Similarity=0.054 Sum_probs=83.7
Q ss_pred cccC--CHHHHhhcCCCccEEEEeccChhc----HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCC
Q 007327 64 PVHS--TVEAACAAHPMADVFINFSSFRSA----AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA 137 (608)
Q Consensus 64 ~~y~--sv~~i~~~~p~vDlavi~vp~~~~----~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPN 137 (608)
+.|. +..++.... ++|++|+++|.... ...+.+++. +|.. +|+-.-+---..-++|.+.|+++|..++=..
T Consensus 65 ~~~~~~d~~~ll~~~-~iDvVv~~tp~~~h~~~a~~~~~~aL~-aGkh-Vv~~NKkpla~~~~eL~~~A~~~g~~~~~ea 141 (327)
T 3do5_A 65 MLRDDAKAIEVVRSA-DYDVLIEASVTRVDGGEGVNYIREALK-RGKH-VVTSNKGPLVAEFHGLMSLAERNGVRLMYEA 141 (327)
T ss_dssp SCSBCCCHHHHHHHS-CCSEEEECCCCC----CHHHHHHHHHT-TTCE-EEECCSHHHHHHHHHHHHHHHHTTCCEECGG
T ss_pred cccCCCCHHHHhcCC-CCCEEEECCCCcccchhHHHHHHHHHH-CCCe-EEecCchhhHHHHHHHHHHHHhhCCcEEEEE
Confidence 4666 899987653 69999999998632 344555554 7765 3321112111246789999999999876333
Q ss_pred cccccccCcccccccCCcccccccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHH
Q 007327 138 TVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHIL 215 (608)
Q Consensus 138 c~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~ 215 (608)
+.|-..|....+. .....+.|.=|. .||+..+- +....+.|..|+.++ ..+.-+-
T Consensus 142 ~v~~g~Pii~~l~------------~~l~~~~I~~I~GIlnGT~nyi-lt~m~~~g~~f~~~l----------~~Aq~~G 198 (327)
T 3do5_A 142 TVGGAMPVVKLAK------------RYLALCEIESVKGIFNGTCNYI-LSRMEEERLPYEHIL----------KEAQELG 198 (327)
T ss_dssp GSSTTSCCHHHHH------------TTTTTSCEEEEEEECCHHHHHH-HHHHHHHCCCHHHHH----------HHHHHTT
T ss_pred EeeecCHHHHHHH------------HHhhCCCccEEEEEECCCcCcc-hhhcCcCCcCHHHHH----------HHHHHcC
Confidence 3332233321110 112446666555 38887664 444433344333321 1222334
Q ss_pred HhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 216 RFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 216 ~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
|-+.||.-. +| |..-.+|+.=.++.+
T Consensus 199 yaE~DP~~D-----v~-G~D~a~Kl~ILa~~~ 224 (327)
T 3do5_A 199 YAEADPSYD-----VE-GIDAALKLVIIANTI 224 (327)
T ss_dssp SSCSSCHHH-----HT-SHHHHHHHHHHHHHT
T ss_pred CCCCCchhh-----cC-ChhHHHHHHHHHHhh
Confidence 566677754 35 666667777777764
No 143
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=89.92 E-value=0.56 Score=49.60 Aligned_cols=122 Identities=11% Similarity=-0.005 Sum_probs=72.1
Q ss_pred CcEEEEE-cCCch-HHHHHhhCccc---CCCCCCcEEEEeCCCCCCccccccCceeecc-cccCCHHHHhhcCCCccEEE
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFL---CGRETPSVAGIINPGAEGFQKLFFGQEEIAI-PVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~---~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~-~~y~sv~~i~~~~p~vDlav 83 (608)
-.++||| |..++ +++.+.+.+.. +..+.++++.++ +.... .+.+ .+-.|+ ++|.+.+|++.. +++|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d-~~~~~-a~~~--a~~~~~~~~y~d~~~ll~~-~~vD~V~ 101 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALAD-QDQAM-AERH--AAKLGAEKAYGDWRELVND-PQVDVVD 101 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEEC-SSHHH-HHHH--HHHHTCSEEESSHHHHHHC-TTCCEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEc-CCHHH-HHHH--HHHcCCCeEECCHHHHhcC-CCCCEEE
Confidence 4688885 22233 66666543210 001224565555 52221 0001 123455 599999999875 3699999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCe-EEcCCc
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKV-VIGPAT 138 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~r-vlGPNc 138 (608)
|++|...-.+.+++++. +|. .++|= .-.....+.++|++.|+++|.. .+|-|.
T Consensus 102 I~tp~~~H~~~~~~al~-aGk-hVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 156 (412)
T 4gqa_A 102 ITSPNHLHYTMAMAAIA-AGK-HVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNN 156 (412)
T ss_dssp ECSCGGGHHHHHHHHHH-TTC-EEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred ECCCcHHHHHHHHHHHH-cCC-CeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccce
Confidence 99999876666666665 784 44442 1134445778999999999976 566654
No 144
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=89.37 E-value=2.2 Score=45.09 Aligned_cols=118 Identities=16% Similarity=0.075 Sum_probs=63.9
Q ss_pred CCcEEEEEc--CCch-HHH-HHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccccc--CCHHHHhhcCCCccEE
Q 007327 9 KTTQALFYN--YKQL-PIQ-RMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVH--STVEAACAAHPMADVF 82 (608)
Q Consensus 9 p~s~avv~g--~~~~-~~~-~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y--~sv~~i~~~~p~vDla 82 (608)
+.+++|||+ +.|. ++| .|.++.|. ..+++ .+.....++....+.|.+ +.+- .+.++. . ++|++
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~---~~~l~-~~ss~~aG~~~~~~~~~~---~~v~~~~~~~~~-~---~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFD---LIEPV-FFSTSNAGGKAPSFAKNE---TTLKDATSIDDL-K---KCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGG---GSEEE-EEESSCTTSBCCTTCCSC---CBCEETTCHHHH-H---TCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCC---ceEEE-EEechhcCCCHHHcCCCc---eEEEeCCChhHh-c---CCCEE
Confidence 568999952 3233 777 77777763 22233 333132222223344422 2221 123332 3 48999
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEE-ecCCC----------CHHHHHHHHHHHHhCCC-eEEcCCcc
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAI-IAEGV----------PEADTKQLIAYARSNNK-VVIGPATV 139 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~vi-is~Gf----------~e~~~~~l~~~a~~~g~-rvlGPNc~ 139 (608)
+.|+|... .....+.+.++|+|.+|| .|+-| +|...+++ +.+++.++ .|..|||.
T Consensus 73 f~a~~~~~-s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~~~~i~~Ianp~C~ 139 (377)
T 3uw3_A 73 ITCQGGDY-TNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVI-KDALVNGTKNFIGGNCT 139 (377)
T ss_dssp EECSCHHH-HHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHH-HHHHHTTCCEEEECCHH
T ss_pred EECCChHH-HHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHH-hhhhhcCCcEEEcCCHH
Confidence 99999864 455556666689864444 44434 23233444 34445676 58899994
No 145
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.99 E-value=0.41 Score=47.94 Aligned_cols=113 Identities=12% Similarity=0.060 Sum_probs=63.0
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecc--cccCCHHHHhhcCCCccEEEE
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI--PVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~--~~y~sv~~i~~~~p~vDlavi 84 (608)
.++++||| |..|. +.+.+.+.|+ |. .|..++ +.... ...+. + .|. ..+.+++++.. +.|++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~----~~-~V~~~d-~~~~~-~~~~~--~-~g~~~~~~~~~~~~~~---~aDvVil 72 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHP----HY-KIVGYN-RSDRS-RDIAL--E-RGIVDEATADFKVFAA---LADVIIL 72 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT----TS-EEEEEC-SSHHH-HHHHH--H-TTSCSEEESCTTTTGG---GCSEEEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCC----Cc-EEEEEc-CCHHH-HHHHH--H-cCCcccccCCHHHhhc---CCCEEEE
Confidence 46789995 32233 6777777642 11 355665 42210 00010 0 233 34566666544 3799999
Q ss_pred eccChhcHHHHHHHhcCC--CCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 85 FSSFRSAAASSMAALKQP--TIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~--gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
+||+.. ...+++++... +-+.+|+..++......+++.+...+.+.|+++
T Consensus 73 avp~~~-~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~ 124 (290)
T 3b1f_A 73 AVPIKK-TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVG 124 (290)
T ss_dssp CSCHHH-HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCHHH-HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEE
Confidence 999976 57788877543 223455555565544445565555444677775
No 146
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.76 E-value=0.14 Score=53.67 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=45.3
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
..++.++.. +.|++|.++|+.. -..+.++|.+.|+..+= +| +..+ .+.++.+.|++.|+.++
T Consensus 68 ~~~l~~~~~---~~DvVi~~~p~~~-~~~v~~~~~~~g~~yvD-~s-~~~~-~~~~l~~~a~~~g~~~i 129 (365)
T 3abi_A 68 FDKLVEVMK---EFELVIGALPGFL-GFKSIKAAIKSKVDMVD-VS-FMPE-NPLELRDEAEKAQVTIV 129 (365)
T ss_dssp HHHHHHHHT---TCSEEEECCCGGG-HHHHHHHHHHHTCEEEE-CC-CCSS-CGGGGHHHHHHTTCEEE
T ss_pred HHHHHHHHh---CCCEEEEecCCcc-cchHHHHHHhcCcceEe-ee-ccch-hhhhhhhhhccCCceee
Confidence 344555544 4899999999975 57889999999987543 23 3333 45678889999999877
No 147
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=88.65 E-value=0.8 Score=47.74 Aligned_cols=108 Identities=11% Similarity=-0.022 Sum_probs=49.1
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++=+++.||| |.-|+ +.+++..+|+. |.+.+ +... ...+...+.+++|+.. +.|++++
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-r~~~---------~~~~~~~~~sl~ell~---~aDvVil 228 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGMS-------VRYWN-RSTL---------SGVDWIAHQSPVDLAR---DSDVLAV 228 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE-------EEEEC-SSCC---------TTSCCEECSSHHHHHH---TCSEEEE
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCE-------EEEEc-CCcc---------cccCceecCCHHHHHh---cCCEEEE
Confidence 4456888885 33343 78888888653 55666 4322 1123445789999876 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..+.-.
T Consensus 229 ~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA 280 (340)
T 4dgs_A 229 CVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGA 280 (340)
T ss_dssp CC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEE
T ss_pred eCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEE
Confidence 999543333332 22222233345554443344588888888877665533
No 148
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=88.37 E-value=0.73 Score=45.27 Aligned_cols=92 Identities=12% Similarity=0.029 Sum_probs=56.0
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++++||| |..|+ +.+++.+.|+ .|..++ +... ....+ .+-.|+..+.+..++.. ++|++++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~-------~v~~~~-~~~~-~~~~~--~~~~g~~~~~~~~~~~~---~~D~Vi~~v 68 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPH-------ELIISG-SSLE-RSKEI--AEQLALPYAMSHQDLID---QVDLVILGI 68 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSC-------EEEEEC-SSHH-HHHHH--HHHHTCCBCSSHHHHHH---TCSEEEECS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCC-------eEEEEC-CCHH-HHHHH--HHHcCCEeeCCHHHHHh---cCCEEEEEe
Confidence 46788885 22233 7778877753 355555 4221 00001 01137788889988765 489999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEecCCCCHH
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIAEGVPEA 117 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis~Gf~e~ 117 (608)
|+. ....+++++. .|. .+|-.++|++..
T Consensus 69 ~~~-~~~~v~~~l~-~~~-~vv~~~~~~~~~ 96 (259)
T 2ahr_A 69 KPQ-LFETVLKPLH-FKQ-PIISMAAGISLQ 96 (259)
T ss_dssp CGG-GHHHHHTTSC-CCS-CEEECCTTCCHH
T ss_pred CcH-hHHHHHHHhc-cCC-EEEEeCCCCCHH
Confidence 976 4777877765 443 333345688764
No 149
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.35 E-value=0.21 Score=51.46 Aligned_cols=93 Identities=10% Similarity=-0.012 Sum_probs=54.3
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc---------cCceeecccccCCHHHHhhcC
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF---------FGQEEIAIPVHSTVEAACAAH 76 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~---------~g~ev~G~~~y~sv~~i~~~~ 76 (608)
-|++|+|+| |..|. ..++|.+.|+. |..++ .... ....+ .|.+. ++++..+.++ ..
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~-------V~~~~-r~~~-~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~-~~-- 79 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEE-------VILWA-RRKE-IVDLINVSHTSPYVEESKI-TVRATNDLEE-IK-- 79 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSHH-HHHHHHHHSCBTTBTTCCC-CSEEESCGGG-CC--
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCe-------EEEEe-CCHH-HHHHHHHhCCcccCCCCee-eEEEeCCHHH-hc--
Confidence 378899996 33344 67788887653 44555 3111 00000 11111 4566777776 33
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCH
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPE 116 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e 116 (608)
+.|+++++||+. .+.++++.+.. .=+.+|.++.|+..
T Consensus 80 -~aDvVil~vk~~-~~~~v~~~l~~-~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 80 -KEDILVIAIPVQ-YIREHLLRLPV-KPSMVLNLSKGIEI 116 (335)
T ss_dssp -TTEEEEECSCGG-GHHHHHTTCSS-CCSEEEECCCCCCT
T ss_pred -CCCEEEEECCHH-HHHHHHHHhCc-CCCEEEEEeCCCCC
Confidence 479999999985 48888877653 22345555668765
No 150
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.25 E-value=3.7 Score=41.41 Aligned_cols=83 Identities=14% Similarity=0.070 Sum_probs=52.0
Q ss_pred cEEEEEcCC---chHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 11 TQALFYNYK---QLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 11 s~avv~g~~---~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
+|+||||.+ +.+.+.+.+.|+. |..++ +... .+..++.. +.|++|++||
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~-------V~~~~-~~~~-----------------~~~~~~~~---~aDvVilavp 74 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYP-------ISILD-REDW-----------------AVAESILA---NADVVIVSVP 74 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCC-------EEEEC-TTCG-----------------GGHHHHHT---TCSEEEECSC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCe-------EEEEE-CCcc-----------------cCHHHHhc---CCCEEEEeCC
Confidence 789996343 3377788887653 45555 3221 14555544 4799999999
Q ss_pred ChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHH
Q 007327 88 FRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQL 122 (608)
Q Consensus 88 ~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l 122 (608)
+.. +..+++++.. ..-..+|+..++.+....+++
T Consensus 75 ~~~-~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~ 109 (298)
T 2pv7_A 75 INL-TLETIERLKPYLTENMLLADLTSVKREPLAKM 109 (298)
T ss_dssp GGG-HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHH
T ss_pred HHH-HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHH
Confidence 986 7788887753 223346666677765444444
No 151
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=87.96 E-value=0.56 Score=48.22 Aligned_cols=79 Identities=9% Similarity=-0.019 Sum_probs=52.6
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE-EcCCccc
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV-IGPATVG 140 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv-lGPNc~G 140 (608)
.++|.+++|++... ++|+++|++|...-.+.+++++. +|.. +++= .-.....+.++|.+.|+++|..+ +..+..-
T Consensus 53 ~~~~~~~~~ll~~~-~vD~V~I~tp~~~H~~~~~~al~-aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~ 129 (337)
T 3ip3_A 53 PKKYNNWWEMLEKE-KPDILVINTVFSLNGKILLEALE-RKIH-AFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGI 129 (337)
T ss_dssp CEECSSHHHHHHHH-CCSEEEECSSHHHHHHHHHHHHH-TTCE-EEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGG
T ss_pred CcccCCHHHHhcCC-CCCEEEEeCCcchHHHHHHHHHH-CCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccc
Confidence 47999999988643 69999999999875555555554 7855 3331 11334457789999999999763 3443333
Q ss_pred cccc
Q 007327 141 GIQA 144 (608)
Q Consensus 141 i~~~ 144 (608)
-++|
T Consensus 130 R~~p 133 (337)
T 3ip3_A 130 RYRP 133 (337)
T ss_dssp GGSH
T ss_pred cCCH
Confidence 3333
No 152
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=87.48 E-value=3.2 Score=43.70 Aligned_cols=117 Identities=15% Similarity=0.020 Sum_probs=62.5
Q ss_pred CcEEEEEc--CCch-HHH-HHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccccc--CCHHHHhhcCCCccEEE
Q 007327 10 TTQALFYN--YKQL-PIQ-RMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVH--STVEAACAAHPMADVFI 83 (608)
Q Consensus 10 ~s~avv~g--~~~~-~~~-~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y--~sv~~i~~~~p~vDlav 83 (608)
++++|||+ +.|. ++| .|.++.|. ..+++ .+.....++....+.|.+ +.+- .+.++. . ++|+++
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~---~~~l~-~~ss~~aG~~~~~~~~~~---~~~~~~~~~~~~-~---~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFD---LIEPV-FFSTSQIGVPAPNFGKDA---GMLHDAFDIESL-K---QLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGG---GSEEE-EEESSSTTSBCCCSSSCC---CBCEETTCHHHH-T---TCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCC---ceEEE-EEeccccCcCHHHhCCCc---eEEEecCChhHh-c---cCCEEE
Confidence 36899952 3333 777 77777763 12233 333133222223344422 2222 123332 2 489999
Q ss_pred EeccChhcHHHHHHHhcCCCCCEEEE-ecCCC----------CHHHHHHHHHHHHhCCC-eEEcCCcc
Q 007327 84 NFSSFRSAAASSMAALKQPTIRVVAI-IAEGV----------PEADTKQLIAYARSNNK-VVIGPATV 139 (608)
Q Consensus 84 i~vp~~~~~~~~le~~~~~gv~~~vi-is~Gf----------~e~~~~~l~~~a~~~g~-rvlGPNc~ 139 (608)
.|+|... .....+.+.++|+|..|| .|+-| +|.-.+++ +.+++.++ .|..|||-
T Consensus 70 ~a~~~~~-s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i-~~~~~~~i~~Ianp~C~ 135 (370)
T 3pzr_A 70 TCQGGSY-TEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQI-LHGIHHGTKTFVGGNCT 135 (370)
T ss_dssp ECSCHHH-HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHH-HHHHHTTCCEEEECCHH
T ss_pred ECCChHH-HHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHH-hhhhhcCCcEEEcCChH
Confidence 9999864 445556666689865555 34434 23233333 34445676 48899994
No 153
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.15 E-value=0.93 Score=46.35 Aligned_cols=105 Identities=9% Similarity=-0.015 Sum_probs=62.7
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+..+++.||| |..|+ +.+++..+|+. |.+++ +... . + |...+.+++++.. +.|++++
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~G~~-------V~~~d-r~~~-~-------~--~~~~~~~l~ell~---~aDvV~l 180 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAALGAQ-------VRGFS-RTPK-E-------G--PWRFTNSLEEALR---EARAAVC 180 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTCE-------EEEEC-SSCC-C-------S--SSCCBSCSHHHHT---TCSEEEE
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCE-------EEEEC-CCcc-c-------c--CcccCCCHHHHHh---hCCEEEE
Confidence 5667899995 33344 77888888653 55666 4221 0 1 3345678888776 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++.-+-.++++|.+..++..+.
T Consensus 181 ~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~ 230 (303)
T 1qp8_A 181 ALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQF 230 (303)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTC
T ss_pred eCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCce
Confidence 999864222222 222222334455555443333678888888876553
No 154
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=86.83 E-value=0.58 Score=48.88 Aligned_cols=110 Identities=13% Similarity=0.002 Sum_probs=65.6
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |..|+ +.+++..+|+. |.+.+ |...... ..-.|...+.+++|+.. +.|++++
T Consensus 166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~-------V~~~d-~~~~~~~-----~~~~g~~~~~~l~ell~---~aDvV~l 229 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAVALRAKAFGFN-------VLFYD-PYLSDGV-----ERALGLQRVSTLQDLLF---HSDCVTL 229 (347)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE-------EEEEC-TTSCTTH-----HHHHTCEECSSHHHHHH---HCSEEEE
T ss_pred CCCCEEEEEeECHHHHHHHHHHHHCCCE-------EEEEC-CCcchhh-----HhhcCCeecCCHHHHHh---cCCEEEE
Confidence 4567889885 32233 88888888653 55666 5322100 12235555668999876 3799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.+...+-..++|-++--+..++++|.+..++.++.
T Consensus 230 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 279 (347)
T 1mx3_A 230 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR 279 (347)
T ss_dssp CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred cCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc
Confidence 999753222222 223323334555555544444788888888888776
No 155
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=86.82 E-value=0.26 Score=51.90 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=44.4
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
+.++.++.. ++|++|.++|... -..+.++|.+.|+..+- +| ..++ ...++.+.|++.|+.++
T Consensus 68 ~~~l~~ll~---~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD-~s-~~~~-~~~~l~~~Ak~aG~~~l 129 (365)
T 2z2v_A 68 FDKLVEVMK---EFELVIGALPGFL-GFKSIKAAIKSKVDMVD-VS-FMPE-NPLELRDEAEKAQVTIV 129 (365)
T ss_dssp HHHHHHHHT---TCSCEEECCCHHH-HHHHHHHHHHTTCCEEE-CC-CCSS-CGGGGHHHHHHTTCEEE
T ss_pred HHHHHHHHh---CCCEEEECCChhh-hHHHHHHHHHhCCeEEE-cc-CCcH-HHHHHHHHHHHcCCEEE
Confidence 456666654 4899999999875 45678888888887433 33 3333 24578889999999987
No 156
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.72 E-value=0.99 Score=46.26 Aligned_cols=109 Identities=10% Similarity=-0.018 Sum_probs=61.1
Q ss_pred CcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecc--cccCCHHH-HhhcCCCccEEEE
Q 007327 10 TTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAI--PVHSTVEA-ACAAHPMADVFIN 84 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~--~~y~sv~~-i~~~~p~vDlavi 84 (608)
++|+||| | +++.+.+.+.+.|+. ..|.+++ +.... .... .-.|+ ..+.++++ +.. +.|++|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~-----~~V~~~d-r~~~~-~~~a---~~~G~~~~~~~~~~~~~~~---~aDvVil 100 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFK-----GKIYGYD-INPES-ISKA---VDLGIIDEGTTSIAKVEDF---SPDFVML 100 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCC-----SEEEEEC-SCHHH-HHHH---HHTTSCSEEESCTTGGGGG---CCSEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCC-----CEEEEEE-CCHHH-HHHH---HHCCCcchhcCCHHHHhhc---cCCEEEE
Confidence 5788885 2 333378888888762 1366776 42210 0000 01233 34567776 544 4799999
Q ss_pred eccChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 85 FSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
+||... ...+++++.. ..-..+|+-.++......+++.+...+ +++|
T Consensus 101 avp~~~-~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~ 148 (314)
T 3ggo_A 101 SSPVRT-FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVG 148 (314)
T ss_dssp CSCGGG-HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEEC
T ss_pred eCCHHH-HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEe
Confidence 999975 6677776653 233445554555654444445444332 5555
No 157
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=86.68 E-value=0.62 Score=45.81 Aligned_cols=60 Identities=20% Similarity=0.202 Sum_probs=44.7
Q ss_pred ccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc-ccc
Q 007327 79 ADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT-VGG 141 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc-~Gi 141 (608)
+|++|-+..|.. +.+.++.|.+.|++ +||-|+||.+...+++.+.+++ ---++-||. +|+
T Consensus 54 ~DVvIDFT~P~a-~~~~~~~~~~~g~~-~ViGTTG~~~~~~~~l~~~a~~-~~vv~apNfSlGv 114 (228)
T 1vm6_A 54 PDVVIDFSSPEA-LPKTVDLCKKYRAG-LVLGTTALKEEHLQMLRELSKE-VPVVQAYNFSIGI 114 (228)
T ss_dssp CSEEEECSCGGG-HHHHHHHHHHHTCE-EEECCCSCCHHHHHHHHHHTTT-SEEEECSCCCHHH
T ss_pred CCEEEECCCHHH-HHHHHHHHHHcCCC-EEEeCCCCCHHHHHHHHHHHhh-CCEEEeccccHHH
Confidence 698887887764 77888888889987 5556889999877777777655 334788884 454
No 158
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=86.05 E-value=1.3 Score=46.41 Aligned_cols=106 Identities=20% Similarity=0.123 Sum_probs=68.6
Q ss_pred CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEeccCh------hc
Q 007327 18 YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSSFR------SA 91 (608)
Q Consensus 18 ~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp~~------~~ 91 (608)
..+|...-+++|. +.++|+.+.....+.+.+++.|. -.|+|.+.|++++... ++|.+|+.+.+. ..
T Consensus 21 ~~aKta~gl~r~~-----~~~iVgvid~~~~G~d~ge~~g~-~~gipi~~~l~~al~~--~~d~lvig~a~~gG~l~~~~ 92 (349)
T 2obn_A 21 TIGKTGLALLRYS-----EAPIVAVIDRNCAGQSLREITGI-YRYVPIVKSVEAALEY--KPQVLVIGIAPKGGGIPDDY 92 (349)
T ss_dssp SSCHHHHHHHHHC-----CSCEEEEECGGGTTSCHHHHHCC-CSCCCEESSHHHHGGG--CCSEEEECCCCCCC-SCGGG
T ss_pred HHHHHhHHhhhcC-----CCcEEEEEeCCCCCCcHHHhcCC-cCCCCccCCHHHHHhC--CCCEEEEEecCCCCCCCHHH
Confidence 4455777778874 34678777634333355555553 4679999999999864 479999997221 22
Q ss_pred HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 92 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 92 ~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
.+.+.+++. +|..-+ -+-+.+-.+..+|.+.|++ |..+++
T Consensus 93 ~~~i~~Al~-~G~~Vv--sglh~~l~~~pel~~~A~~-g~~i~d 132 (349)
T 2obn_A 93 WIELKTALQ-AGMSLV--NGLHTPLANIPDLNALLQP-GQLIWD 132 (349)
T ss_dssp HHHHHHHHH-TTCEEE--ECSSSCCTTCHHHHHHCCT-TCCEEE
T ss_pred HHHHHHHHH-cCCcEE--eCccchhhCCHHHHHHHHc-CCEEEE
Confidence 355666665 787622 2223333355669999999 988776
No 159
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.97 E-value=0.71 Score=47.04 Aligned_cols=107 Identities=6% Similarity=0.045 Sum_probs=63.6
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.=+++.||| | ++..+.+++..+|+. |.+++ +... .........+++|+.. +.|++++
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-r~~~---------~~~~~~~~~~l~ell~---~aDiV~l 179 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGMR-------VIAYT-RSSV---------DQNVDVISESPADLFR---QSDFVLI 179 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCE-------EEEEC-SSCC---------CTTCSEECSSHHHHHH---HCSEEEE
T ss_pred eecchheeeccCchhHHHHHHHHhhCcE-------EEEEe-cccc---------ccccccccCChHHHhh---ccCeEEE
Confidence 4446888885 3 333378888888754 56666 5332 1112445668999876 3799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|.......++ +.....+-..++|-++--+..++++|.+..++.++.-
T Consensus 180 ~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~g 230 (290)
T 3gvx_A 180 AIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVW 230 (290)
T ss_dssp CCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCE
T ss_pred EeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceE
Confidence 999633222221 2233233344555554333347888888888877653
No 160
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=85.82 E-value=0.21 Score=54.57 Aligned_cols=93 Identities=9% Similarity=-0.001 Sum_probs=56.5
Q ss_pred CcEEEEE-cCCch-HHHHHhhC------cccCCCCCCcEEEEeCCCCCCccccccCceeecccc----cCCHHHHhhcCC
Q 007327 10 TTQALFY-NYKQL-PIQRMLDF------DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPV----HSTVEAACAAHP 77 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~------~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~----y~sv~~i~~~~p 77 (608)
++|+||| |..|. +.++|.+. |+ +++.+.....+.-.. .+-.|+.. ..++.|+.+
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~------~ViVg~r~~sks~e~-----A~e~G~~v~d~ta~s~aEAa~--- 120 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDI------VVKIGLRKGSKSFDE-----ARAAGFTEESGTLGDIWETVS--- 120 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCC------EEEEEECTTCSCHHH-----HHHTTCCTTTTCEEEHHHHHH---
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCC------EEEEEeCCchhhHHH-----HHHCCCEEecCCCCCHHHHHh---
Confidence 6899996 44444 88888887 64 345454411111000 12245554 257888776
Q ss_pred CccEEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCCCHH
Q 007327 78 MADVFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEA 117 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~ 117 (608)
+.|+++++||+.. ...+++++.. ..-..++++++||.-.
T Consensus 121 ~ADVVILaVP~~~-~~eVl~eI~p~LK~GaILs~AaGf~I~ 160 (525)
T 3fr7_A 121 GSDLVLLLISDAA-QADNYEKIFSHMKPNSILGLSHGFLLG 160 (525)
T ss_dssp HCSEEEECSCHHH-HHHHHHHHHHHSCTTCEEEESSSHHHH
T ss_pred cCCEEEECCChHH-HHHHHHHHHHhcCCCCeEEEeCCCCHH
Confidence 3799999999975 4456655432 2334578999999753
No 161
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=84.69 E-value=2.1 Score=44.20 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=49.4
Q ss_pred ecc-cccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHH---HHHHHhCCCe-EE
Q 007327 61 IAI-PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQL---IAYARSNNKV-VI 134 (608)
Q Consensus 61 ~G~-~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l---~~~a~~~g~r-vl 134 (608)
.|+ ++|.+.+|++.. +++|+++|++|...-.+.+++++. +|. .++|= .-.....+.++| .+.+++.|+. .+
T Consensus 58 ~g~~~~~~d~~~ll~~-~~iDaV~I~tP~~~H~~~~~~al~-aGk-hVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v 134 (390)
T 4h3v_A 58 LGWSTTETDWRTLLER-DDVQLVDVCTPGDSHAEIAIAALE-AGK-HVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMV 134 (390)
T ss_dssp HTCSEEESCHHHHTTC-TTCSEEEECSCGGGHHHHHHHHHH-TTC-EEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCCcccCCHHHHhcC-CCCCEEEEeCChHHHHHHHHHHHH-cCC-CceeecCcccchhHHHHHHHHHHHHHhcCCceEE
Confidence 455 589999998865 369999999999876666666665 784 45541 112333345666 4447778875 56
Q ss_pred cCCc
Q 007327 135 GPAT 138 (608)
Q Consensus 135 GPNc 138 (608)
|-|.
T Consensus 135 ~~~~ 138 (390)
T 4h3v_A 135 GFTY 138 (390)
T ss_dssp ECGG
T ss_pred Eeee
Confidence 6554
No 162
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=84.42 E-value=2.2 Score=43.51 Aligned_cols=101 Identities=10% Similarity=0.110 Sum_probs=56.4
Q ss_pred CCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCC-CccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAE-GFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~-~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
..+.++|+||| |..|. +.++|.+.|+. ....|..++ +... .....+ .-.|+....+..++.. +.|++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~---~~~~V~v~~-r~~~~~~~~~l---~~~G~~~~~~~~e~~~---~aDvV 88 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVL---AAHKIMASS-PDMDLATVSAL---RKMGVKLTPHNKETVQ---HSDVL 88 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSS---CGGGEEEEC-SCTTSHHHHHH---HHHTCEEESCHHHHHH---HCSEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCC---CcceEEEEC-CCccHHHHHHH---HHcCCEEeCChHHHhc---cCCEE
Confidence 45667899995 22233 77888887621 001255555 4321 011111 1136777777877655 37999
Q ss_pred EEeccChhcHHHHHHHhcCC-CCC-EEEEecCCCCHH
Q 007327 83 INFSSFRSAAASSMAALKQP-TIR-VVAIIAEGVPEA 117 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~-gv~-~~viis~Gf~e~ 117 (608)
|++||+. .+.++++.+... .-. .+|-++.|++..
T Consensus 89 ilav~~~-~~~~vl~~l~~~l~~~~ivvs~s~gi~~~ 124 (322)
T 2izz_A 89 FLAVKPH-IIPFILDEIGADIEDRHIVVSCAAGVTIS 124 (322)
T ss_dssp EECSCGG-GHHHHHHHHGGGCCTTCEEEECCTTCCHH
T ss_pred EEEeCHH-HHHHHHHHHHhhcCCCCEEEEeCCCCCHH
Confidence 9999976 478888877531 112 334456788753
No 163
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=84.18 E-value=0.6 Score=48.69 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=58.5
Q ss_pred CcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcC-CCccEEEEec
Q 007327 10 TTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAH-PMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~-p~vDlavi~v 86 (608)
++|+||| | +++.+.+.+.+.||. |.+.+ +.... .... .-.|+..+.++.++.... .+.|+++++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~-------V~~~d-r~~~~-~~~a---~~~G~~~~~~~~e~~~~a~~~aDlVilav 76 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHS-------VFGYN-RSRSG-AKSA---VDEGFDVSADLEATLQRAAAEDALIVLAV 76 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-SCHHH-HHHH---HHTTCCEESCHHHHHHHHHHTTCEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCE-------EEEEe-CCHHH-HHHH---HHcCCeeeCCHHHHHHhcccCCCEEEEeC
Confidence 4688885 3 334488888888753 66776 42221 0000 124556677887765420 0259999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHH
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQL 122 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l 122 (608)
|... +..+++++....-..+|+-.++.+....+++
T Consensus 77 P~~~-~~~vl~~l~~~~~~~iv~Dv~Svk~~i~~~~ 111 (341)
T 3ktd_A 77 PMTA-IDSLLDAVHTHAPNNGFTDVVSVKTAVYDAV 111 (341)
T ss_dssp CHHH-HHHHHHHHHHHCTTCCEEECCSCSHHHHHHH
T ss_pred CHHH-HHHHHHHHHccCCCCEEEEcCCCChHHHHHH
Confidence 9864 6777776654333345555666765433444
No 164
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.10 E-value=1.2 Score=45.71 Aligned_cols=106 Identities=9% Similarity=0.001 Sum_probs=61.4
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccccc---CCHHHHhhcCCCccE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVH---STVEAACAAHPMADV 81 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y---~sv~~i~~~~p~vDl 81 (608)
++-+++.||| |.-|+ +.+.+..+|+. |.+.+ +... ...++..+ .+++|+.. +.|+
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~G~~-------V~~~d-r~~~---------~~~~~~~~~~~~~l~ell~---~aDi 196 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAWGFP-------LRCWS-RSRK---------SWPGVESYVGREELRAFLN---QTRV 196 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTTTCC-------EEEEE-SSCC---------CCTTCEEEESHHHHHHHHH---TCSE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCE-------EEEEc-CCch---------hhhhhhhhcccCCHHHHHh---hCCE
Confidence 4557899995 33343 77888888753 55665 3221 11222222 57888776 4799
Q ss_pred EEEeccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 82 FINFSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 82 avi~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+++++|.......++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 197 V~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ 249 (315)
T 3pp8_A 197 LINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLK 249 (315)
T ss_dssp EEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred EEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCcc
Confidence 999999643232222 233333334555545433334788888888877654
No 165
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=83.75 E-value=1.7 Score=42.66 Aligned_cols=102 Identities=9% Similarity=0.010 Sum_probs=56.6
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCC-ccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
++|+||| |..|. +.++|.+.||. |...+ +.+.. ..+.+. -.|+. .+.+++.. +.|+++++|
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~-------V~~~~-~~~~~~~~~~~~---~~g~~--~~~~~~~~---~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVE-------VVTSL-EGRSPSTIERAR---TVGVT--ETSEEDVY---SCPVVISAV 64 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCE-------EEECC-TTCCHHHHHHHH---HHTCE--ECCHHHHH---TSSEEEECS
T ss_pred CeEEEEechHHHHHHHHHHHHCCCe-------EEEeC-CccCHHHHHHHH---HCCCc--CCHHHHHh---cCCEEEEEC
Confidence 3688885 22233 77888888753 44444 42110 001110 02444 66777655 479999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhC
Q 007327 87 SFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSN 129 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~ 129 (608)
|+......+ +.+... .+.++|-.++......+++.+...+.
T Consensus 65 ~~~~~~~~~-~~~~~~-~~~~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 65 TPGVALGAA-RRAGRH-VRGIYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp CGGGHHHHH-HHHHTT-CCSEEEECSCCCHHHHHHHHHHCSSS
T ss_pred CCHHHHHHH-HHHHHh-cCcEEEEccCCCHHHHHHHHHHHhhC
Confidence 997645554 555432 33255556677655556666655443
No 166
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=82.59 E-value=1.1 Score=47.79 Aligned_cols=104 Identities=10% Similarity=-0.114 Sum_probs=64.3
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| |.-|+ +.+++..+|+. |.+.+ |... .+..+...+.+++|+... .|++++
T Consensus 143 l~gktlGiIGlG~IG~~vA~~l~~~G~~-------V~~~d-~~~~--------~~~~~~~~~~~l~ell~~---aDvV~l 203 (404)
T 1sc6_A 143 ARGKKLGIIGYGHIGTQLGILAESLGMY-------VYFYD-IENK--------LPLGNATQVQHLSDLLNM---SDVVSL 203 (404)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCC--------CCCTTCEECSCHHHHHHH---CSEEEE
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCE-------EEEEc-CCch--------hccCCceecCCHHHHHhc---CCEEEE
Confidence 4556888885 33344 77888888753 56777 6332 112234556689998763 699999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+. -..++|-++--+-.+++.|.+..++..+.
T Consensus 204 ~~P~t~~t~~li~~~~l~~mk---~ga~lIN~aRg~~vd~~aL~~aL~~g~i~ 253 (404)
T 1sc6_A 204 HVPENPSTKNMMGAKEISLMK---PGSLLINASRGTVVDIPALADALASKHLA 253 (404)
T ss_dssp CCCSSTTTTTCBCHHHHHHSC---TTEEEEECSCSSSBCHHHHHHHHHTTSEE
T ss_pred ccCCChHHHHHhhHHHHhhcC---CCeEEEECCCChHHhHHHHHHHHHcCCcc
Confidence 99986322 23444443 34555555533334778888888876554
No 167
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=82.46 E-value=0.97 Score=46.83 Aligned_cols=105 Identities=12% Similarity=-0.003 Sum_probs=62.9
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |.-|+ +.+++..+|+. |.+++ +..... . .+ + -.|.+++++.. +.|++++
T Consensus 143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~~---~--~~--~-~~~~~l~ell~---~aDvV~~ 203 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQVAIKLFKGFGAK-------VIAYD-PYPMKG---D--HP--D-FDYVSLEDLFK---QSDVIDL 203 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCSS---C--CT--T-CEECCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCE-------EEEEC-CCcchh---h--Hh--c-cccCCHHHHHh---cCCEEEE
Confidence 4556788885 32233 78888888753 55666 533210 1 11 1 23568888876 3799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|..... ...++.+. -..++|-++--+-.+++.|.+..++.++.=
T Consensus 204 ~~P~~~~t~~li~~~~l~~mk---~ga~lIn~srg~~vd~~aL~~aL~~g~i~g 254 (333)
T 1dxy_A 204 HVPGIEQNTHIINEAAFNLMK---PGAIVINTARPNLIDTQAMLSNLKSGKLAG 254 (333)
T ss_dssp CCCCCGGGTTSBCHHHHHHSC---TTEEEEECSCTTSBCHHHHHHHHHTTSEEE
T ss_pred cCCCchhHHHHhCHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCccE
Confidence 99975422 23445444 244555554333347888888888776553
No 168
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.05 E-value=1.9 Score=42.07 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=56.8
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
+++++|| |..|. +.+++.+.||. ....|..++ +.... ...+ .+-.|+..+.+..++.. +.|+++++||
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~---~~~~V~~~~-r~~~~-~~~~--~~~~g~~~~~~~~e~~~---~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIV---SSNQIICSD-LNTAN-LKNA--SEKYGLTTTTDNNEVAK---NADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSS---CGGGEEEEC-SCHHH-HHHH--HHHHCCEECSCHHHHHH---HCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCC---CCCeEEEEe-CCHHH-HHHH--HHHhCCEEeCChHHHHH---hCCEEEEEeC
Confidence 5789995 32233 88888888751 112466666 42220 0001 01247788889988765 3799999998
Q ss_pred ChhcHHHHHHHhcCC-CCCEEEE-ecCCCCHH
Q 007327 88 FRSAAASSMAALKQP-TIRVVAI-IAEGVPEA 117 (608)
Q Consensus 88 ~~~~~~~~le~~~~~-gv~~~vi-is~Gf~e~ 117 (608)
+.. +.++++++... .-..+|| +++|++..
T Consensus 73 ~~~-~~~v~~~l~~~l~~~~~vvs~~~gi~~~ 103 (247)
T 3gt0_A 73 PDL-YASIINEIKEIIKNDAIIVTIAAGKSIE 103 (247)
T ss_dssp TTT-HHHHC---CCSSCTTCEEEECSCCSCHH
T ss_pred HHH-HHHHHHHHHhhcCCCCEEEEecCCCCHH
Confidence 864 78888877632 1122444 67898854
No 169
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=81.16 E-value=3.3 Score=41.99 Aligned_cols=111 Identities=6% Similarity=-0.014 Sum_probs=61.6
Q ss_pred CCcEEEEE-cCCc-h-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccc-cCCHHHHhhcCCCccEEEE
Q 007327 9 KTTQALFY-NYKQ-L-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPV-HSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 9 p~s~avv~-g~~~-~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~-y~sv~~i~~~~p~vDlavi 84 (608)
+..++||| |..| + +++.+.+.. +.+++ .++ +.... ...+ .+-.|++. |.+..|.+.. ++|+++|
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~-----~~~l~-v~d-~~~~~-~~~~--a~~~g~~~~~~~~~~~l~~--~~D~V~i 69 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWP-----DIELV-LCT-RNPKV-LGTL--ATRYRVSATCTDYRDVLQY--GVDAVMI 69 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTST-----TEEEE-EEC-SCHHH-HHHH--HHHTTCCCCCSSTTGGGGG--CCSEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCC-----CceEE-EEe-CCHHH-HHHH--HHHcCCCccccCHHHHhhc--CCCEEEE
Confidence 34688885 2223 2 667776642 22345 444 42210 0001 12235663 5444444422 5899999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEe-cCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAII-AEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|+....+.+.+++ ++|.. +++- .-.......++|.+.|+++|+.+
T Consensus 70 ~tp~~~h~~~~~~al-~~Gk~-V~~EKP~~~~~~~~~~l~~~a~~~g~~~ 117 (323)
T 1xea_A 70 HAATDVHSTLAAFFL-HLGIP-TFVDKPLAASAQECENLYELAEKHHQPL 117 (323)
T ss_dssp CSCGGGHHHHHHHHH-HTTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred ECCchhHHHHHHHHH-HCCCe-EEEeCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 999986444444544 47765 3332 12344556788999999999864
No 170
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=80.96 E-value=1.4 Score=45.93 Aligned_cols=108 Identities=10% Similarity=-0.005 Sum_probs=61.0
Q ss_pred CCCCcEEEEE-cCCch-HHHHHh-hCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRML-DFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~-~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
++-+++.||| |..|+ +.+.+. .+|+. |.+++ +..... ... .-.|+....+++++.. +.|+++
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~-------V~~~d-~~~~~~-~~~---~~~g~~~~~~l~ell~---~aDvVi 225 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMK-------LVYYD-VAPADA-ETE---KALGAERVDSLEELAR---RSDCVS 225 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCE-------EEEEC-SSCCCH-HHH---HHHTCEECSSHHHHHH---HCSEEE
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCE-------EEEEC-CCCcch-hhH---hhcCcEEeCCHHHHhc---cCCEEE
Confidence 5557899995 33333 777787 77653 55666 432210 000 0124554458888766 379999
Q ss_pred EeccChhcHH-----HHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 84 NFSSFRSAAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 84 i~vp~~~~~~-----~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+++|...... ..++.+. -..++|-++.-+..++++|.+..++..+.
T Consensus 226 l~vp~~~~t~~li~~~~l~~mk---~gailin~srg~~vd~~aL~~aL~~~~i~ 276 (348)
T 2w2k_A 226 VSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARGPVISQDALIAALKSGKLL 276 (348)
T ss_dssp ECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred EeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCCchhCHHHHHHHHHhCCce
Confidence 9999853222 3344443 34455555544444677777777765433
No 171
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=80.81 E-value=0.82 Score=44.87 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=51.7
Q ss_pred CcEEEEE-cCCch-HHHHHhhCc-ccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFD-FLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~-~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
++++||| |..|. +.+++.+.| +. |..++ +... ....+ .+-.|+..+.+..++. +.|+++++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~-------v~~~~-r~~~-~~~~~--~~~~g~~~~~~~~~~~----~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYR-------IYIAN-RGAE-KRERL--EKELGVETSATLPELH----SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCE-------EEEEC-SSHH-HHHHH--HHHTCCEEESSCCCCC----TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCe-------EEEEC-CCHH-HHHHH--HHhcCCEEeCCHHHHh----cCCEEEEEe
Confidence 4688885 22233 777887776 43 55555 3221 00001 0113666676766543 379999999
Q ss_pred cChhcHHHHHHHhcCCCCCEEEEe-cCCCCH
Q 007327 87 SFRSAAASSMAALKQPTIRVVAII-AEGVPE 116 (608)
Q Consensus 87 p~~~~~~~~le~~~~~gv~~~vii-s~Gf~e 116 (608)
|+. .+..+++++.. . +.+|+- ++|++.
T Consensus 66 ~~~-~~~~v~~~l~~-~-~~ivv~~~~g~~~ 93 (263)
T 1yqg_A 66 KPQ-DMEAACKNIRT-N-GALVLSVAAGLSV 93 (263)
T ss_dssp CHH-HHHHHHTTCCC-T-TCEEEECCTTCCH
T ss_pred Cch-hHHHHHHHhcc-C-CCEEEEecCCCCH
Confidence 955 47788877664 4 444544 478885
No 172
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=80.64 E-value=1 Score=46.61 Aligned_cols=106 Identities=8% Similarity=-0.028 Sum_probs=62.3
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |.-|+ +.+++..+|+. |.+++ +..... + .+ + -.|.+++++.. +.|++++
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~~---~--~~--~-~~~~~l~ell~---~aDvV~~ 204 (331)
T 1xdw_A 144 VRNCTVGVVGLGRIGRVAAQIFHGMGAT-------VIGED-VFEIKG---I--ED--Y-CTQVSLDEVLE---KSDIITI 204 (331)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCCS---C--TT--T-CEECCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCE-------EEEEC-CCccHH---H--Hh--c-cccCCHHHHHh---hCCEEEE
Confidence 4556888885 32233 78888888753 55666 532210 1 11 1 23568988876 3799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++|..... ...++.+ +-..++|-++--+-.+++.|.+..++.++.=.
T Consensus 205 ~~p~t~~t~~li~~~~l~~m---k~ga~lin~srg~~vd~~aL~~aL~~g~i~gA 256 (331)
T 1xdw_A 205 HAPYIKENGAVVTRDFLKKM---KDGAILVNCARGQLVDTEAVIEAVESGKLGGY 256 (331)
T ss_dssp CCCCCTTTCCSBCHHHHHTS---CTTEEEEECSCGGGBCHHHHHHHHHHTSEEEE
T ss_pred ecCCchHHHHHhCHHHHhhC---CCCcEEEECCCcccccHHHHHHHHHhCCceEE
Confidence 99974222 2334433 33455555553233378888888888766533
No 173
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=80.43 E-value=1.7 Score=45.18 Aligned_cols=109 Identities=12% Similarity=0.105 Sum_probs=63.5
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| | ++..+.+++..+|+. |.+++ |..... . ..-.|.. +.+++++.. +.|++++
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~-------V~~~d-~~~~~~--~---~~~~g~~-~~~l~ell~---~aDvV~l 225 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMK-------TIGYD-PIISPE--V---SASFGVQ-QLPLEEIWP---LCDFITV 225 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE-------EEEEC-SSSCHH--H---HHHTTCE-ECCHHHHGG---GCSEEEE
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCE-------EEEEC-CCcchh--h---hhhcCce-eCCHHHHHh---cCCEEEE
Confidence 5567889985 3 333378888877653 56676 533210 0 0123443 358888776 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++.-+-.++++|.+..++..+.
T Consensus 226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~ 275 (335)
T 2g76_A 226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCA 275 (335)
T ss_dssp CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE
T ss_pred ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCcc
Confidence 999864222222 223333344566655543434778888888876554
No 174
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=80.39 E-value=2 Score=46.16 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=41.2
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChh----------cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHh
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRS----------AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARS 128 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~----------~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~ 128 (608)
++.+-.+++++.. +.|+++++||... .+..+.+.+.+..-..+||..|.++....+++.+...+
T Consensus 96 ~l~~ttd~~ea~~---~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~l~~~l~~ 169 (432)
T 3pid_A 96 NFRATTDKHDAYR---NADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGI 169 (432)
T ss_dssp CEEEESCHHHHHT---TCSEEEECCCCEEETTTTEEECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHHHHHHHTC
T ss_pred CeEEEcCHHHHHh---CCCEEEEeCCCccccccccccHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHHHHHHHhh
Confidence 4666677777655 4799999999862 24555555443233457777777776666666665543
No 175
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=79.91 E-value=5.1 Score=41.56 Aligned_cols=35 Identities=9% Similarity=0.006 Sum_probs=26.2
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.|+|... .....+.+.++|++ +|..|+-|
T Consensus 68 ~vDvV~~a~g~~~-s~~~a~~~~~aG~~-VId~Sa~~ 102 (345)
T 2ozp_A 68 PADILVLALPHGV-FAREFDRYSALAPV-LVDLSADF 102 (345)
T ss_dssp CCSEEEECCCTTH-HHHTHHHHHTTCSE-EEECSSTT
T ss_pred CCCEEEEcCCcHH-HHHHHHHHHHCCCE-EEEcCccc
Confidence 4899999999875 45566677778987 66667655
No 176
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=79.71 E-value=1.2 Score=43.84 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=56.0
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++.++++||| |..|. +.+.+.+.|+ ..|..++ +.... ...+ .+-.|+..+.+++++.. +.|++++
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~------~~v~~~~-~~~~~-~~~~--~~~~g~~~~~~~~~~~~---~~Dvvi~ 74 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF------RIVQVYS-RTEES-AREL--AQKVEAEYTTDLAEVNP---YAKLYIV 74 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC------CEEEEEC-SSHHH-HHHH--HHHTTCEEESCGGGSCS---CCSEEEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC------eEEEEEe-CCHHH-HHHH--HHHcCCceeCCHHHHhc---CCCEEEE
Confidence 3457899995 22233 6777777754 3455665 32210 0000 01126777888877644 4899999
Q ss_pred eccChhcHHHHHHHhcCC-CC-CEEEEecCCCCH
Q 007327 85 FSSFRSAAASSMAALKQP-TI-RVVAIIAEGVPE 116 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~-gv-~~~viis~Gf~e 116 (608)
++|... ..++++.+... .- +.++-+++|++.
T Consensus 75 av~~~~-~~~v~~~l~~~~~~~~ivv~~s~~~~~ 107 (266)
T 3d1l_A 75 SLKDSA-FAELLQGIVEGKREEALMVHTAGSIPM 107 (266)
T ss_dssp CCCHHH-HHHHHHHHHTTCCTTCEEEECCTTSCG
T ss_pred ecCHHH-HHHHHHHHHhhcCCCcEEEECCCCCch
Confidence 999985 67788777531 11 234445667764
No 177
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=79.67 E-value=4 Score=42.53 Aligned_cols=97 Identities=8% Similarity=-0.071 Sum_probs=54.3
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCC--------Ccccc-ccCcee-ecccccCCHHHHhhcC
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAE--------GFQKL-FFGQEE-IAIPVHSTVEAACAAH 76 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~--------~~~~~-~~g~ev-~G~~~y~sv~~i~~~~ 76 (608)
+++|+|+| |.-|. +.+.|.+.|+. |..++ .... +.+.. +.|.++ .++.+..+++++..
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~-------V~l~~-r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~-- 98 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQK-------VRLWS-YESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE-- 98 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCC-------EEEEC-SCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT--
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCe-------EEEEe-CCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh--
Confidence 46799996 22233 66777777653 44444 2111 00000 111111 12455678877654
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCC-C-CCEEEEecCCCCHH
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVPEA 117 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~-g-v~~~viis~Gf~e~ 117 (608)
+.|++|++||... +.++++++... . =..+|.++.|+...
T Consensus 99 -~aDvVilaVp~~~-~~~vl~~i~~~l~~~~ivvs~~kGi~~~ 139 (356)
T 3k96_A 99 -GVTDILIVVPSFA-FHEVITRMKPLIDAKTRIAWGTKGLAKG 139 (356)
T ss_dssp -TCCEEEECCCHHH-HHHHHHHHGGGCCTTCEEEECCCSCBTT
T ss_pred -cCCEEEECCCHHH-HHHHHHHHHHhcCCCCEEEEEeCCCCcC
Confidence 4799999999975 77888877631 1 12345556788653
No 178
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=79.48 E-value=1.2 Score=46.37 Aligned_cols=103 Identities=12% Similarity=-0.003 Sum_probs=61.1
Q ss_pred CCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
.=+++.||| | ++..+.+.+..+|+. |.+++ |.... +..+.-.|.+++++.. +.|+++++
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~~-------V~~~d-~~~~~--------~~~~~~~~~~l~ell~---~aDvV~l~ 207 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGAK-------VIAYD-VAYNP--------EFEPFLTYTDFDTVLK---EADIVSLH 207 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCG--------GGTTTCEECCHHHHHH---HCSEEEEC
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCCE-------EEEEC-CChhh--------hhhccccccCHHHHHh---cCCEEEEc
Confidence 345788885 3 333378888888753 55666 53321 1112234558999876 36999999
Q ss_pred ccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 86 SSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 86 vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+|..... ...++.+. -..++|-++--+-.+++.|.+..++..+.
T Consensus 208 ~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~~g~i~ 256 (343)
T 2yq5_A 208 TPLFPSTENMIGEKQLKEMK---KSAYLINCARGELVDTGALIKALQDGEIA 256 (343)
T ss_dssp CCCCTTTTTCBCHHHHHHSC---TTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred CCCCHHHHHHhhHHHHhhCC---CCcEEEECCCChhhhHHHHHHHHHcCCCc
Confidence 9953211 23344443 34455555433334788888888877654
No 179
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=79.42 E-value=1.6 Score=44.87 Aligned_cols=110 Identities=11% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCC-CCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINP-GAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p-~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
+.-+++.||| | ++..+.+.+..+|+. |.+++ + .... .. ..-.|.....+++++.. +.|+++
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~~--~~---~~~~g~~~~~~l~ell~---~aDvVi 207 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMD-------IDYFD-THRASS--SD---EASYQATFHDSLDSLLS---VSQFFS 207 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCE-------EEEEC-SSCCCH--HH---HHHHTCEECSSHHHHHH---HCSEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCE-------EEEEC-CCCcCh--hh---hhhcCcEEcCCHHHHHh---hCCEEE
Confidence 5567888885 3 333378888877643 56776 4 3321 00 01134544458888776 379999
Q ss_pred EeccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 84 NFSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 84 i~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+++|.......++ +.....+-..++|-++.-+-.+++.|.+..++..+.
T Consensus 208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred EeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 9999643222222 122222334455544432223667777777776544
No 180
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.20 E-value=4 Score=43.60 Aligned_cols=63 Identities=11% Similarity=0.063 Sum_probs=38.0
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhc---------HHHHHHHhcCC-CC---CEEEEecCCCCHHH-HHHHHHHHHh
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSA---------AASSMAALKQP-TI---RVVAIIAEGVPEAD-TKQLIAYARS 128 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~---------~~~~le~~~~~-gv---~~~viis~Gf~e~~-~~~l~~~a~~ 128 (608)
+....+++++.. +.|+++++||.... +..+++.+... .- ..+||..|..+... .+.+.+...+
T Consensus 64 l~~t~~~~~~~~---~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 64 LSGTTDFKKAVL---DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EEEESCHHHHHH---TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred eEEeCCHHHHhc---cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 566778877555 47999999987653 56666655421 11 34555555554333 5556665555
No 181
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=79.14 E-value=1.8 Score=44.72 Aligned_cols=110 Identities=9% Similarity=0.024 Sum_probs=63.7
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| |.-|+ +.+++..+|+. |.+.+ +.... . ....+...+.+++|+.. +.|++++
T Consensus 138 l~g~tvGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-r~~~~-~-----~~~~~~~~~~~l~ell~---~aDvV~l 200 (324)
T 3hg7_A 138 LKGRTLLILGTGSIGQHIAHTGKHFGMK-------VLGVS-RSGRE-R-----AGFDQVYQLPALNKMLA---QADVIVS 200 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCC-C-----TTCSEEECGGGHHHHHH---TCSEEEE
T ss_pred cccceEEEEEECHHHHHHHHHHHhCCCE-------EEEEc-CChHH-h-----hhhhcccccCCHHHHHh---hCCEEEE
Confidence 4456888885 33344 88888888753 55666 42210 0 11222334678999876 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..++-
T Consensus 201 ~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~g 251 (324)
T 3hg7_A 201 VLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGM 251 (324)
T ss_dssp CCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSE
T ss_pred eCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceE
Confidence 999643222222 2222223344555454333347888888888876643
No 182
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=78.83 E-value=2.4 Score=45.40 Aligned_cols=107 Identities=8% Similarity=-0.024 Sum_probs=61.9
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| |.-|+ +.+.+..+|+. |.+.+ |... ....+...+.+++|+... .|++++
T Consensus 154 l~gktvGIIGlG~IG~~vA~~l~~~G~~-------V~~yd-~~~~--------~~~~~~~~~~sl~ell~~---aDvV~l 214 (416)
T 3k5p_A 154 VRGKTLGIVGYGNIGSQVGNLAESLGMT-------VRYYD-TSDK--------LQYGNVKPAASLDELLKT---SDVVSL 214 (416)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-TTCC--------CCBTTBEECSSHHHHHHH---CSEEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCE-------EEEEC-Ccch--------hcccCcEecCCHHHHHhh---CCEEEE
Confidence 4456888885 33344 77888888753 56776 5322 112234557799998773 699999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 215 hvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~ 264 (416)
T 3k5p_A 215 HVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLA 264 (416)
T ss_dssp CCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEE
T ss_pred eCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCcc
Confidence 999853222211 222223334555555433334788888888776654
No 183
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=77.06 E-value=2.3 Score=43.87 Aligned_cols=112 Identities=11% Similarity=0.085 Sum_probs=63.1
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| |.-|+ +.+.+..+|+. |.+++ +.... . +.....-.+.+++|+.. +.|++++
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~G~~-------V~~~d-r~~~~-~-----~~~~~~~~~~~l~ell~---~aDvV~l 197 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASALGMH-------VIGVN-TTGHP-A-----DHFHETVAFTATADALA---TANFIVN 197 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEE-SSCCC-C-----TTCSEEEEGGGCHHHHH---HCSEEEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhCCCE-------EEEEC-CCcch-h-----HhHhhccccCCHHHHHh---hCCEEEE
Confidence 4556888885 33343 88888888753 55666 42210 0 01111123568888876 3699999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..++-.|
T Consensus 198 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~ 250 (324)
T 3evt_A 198 ALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAA 250 (324)
T ss_dssp CCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEE
T ss_pred cCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEE
Confidence 999643222211 222222333455545433334788888888887765444
No 184
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=75.80 E-value=2.6 Score=43.48 Aligned_cols=92 Identities=14% Similarity=0.047 Sum_probs=53.1
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++.++|+||| | +++.+.+++.+.|+. |...+ +......... .-.|+.++ ++.++.. +.|++++
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~-------V~~~~-~~~~~~~~~a---~~~G~~~~-~~~e~~~---~aDvVil 78 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVD-------VTVGL-RSGSATVAKA---EAHGLKVA-DVKTAVA---AADVVMI 78 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCC-------EEEEC-CTTCHHHHHH---HHTTCEEE-CHHHHHH---TCSEEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCE-------EEEEE-CChHHHHHHH---HHCCCEEc-cHHHHHh---cCCEEEE
Confidence 4557899996 3 233377888888653 33444 3221000000 11355555 7877665 4799999
Q ss_pred eccChhcHHHHHH-HhcC-CCCCEEEEecCCC
Q 007327 85 FSSFRSAAASSMA-ALKQ-PTIRVVAIIAEGV 114 (608)
Q Consensus 85 ~vp~~~~~~~~le-~~~~-~gv~~~viis~Gf 114 (608)
+||... ...+++ ++.. ..-..+|+.++|+
T Consensus 79 avp~~~-~~~v~~~~i~~~l~~~~ivi~~~gv 109 (338)
T 1np3_A 79 LTPDEF-QGRLYKEEIEPNLKKGATLAFAHGF 109 (338)
T ss_dssp CSCHHH-HHHHHHHHTGGGCCTTCEEEESCCH
T ss_pred eCCcHH-HHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 999976 567776 6542 2223456666665
No 185
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=75.30 E-value=2.7 Score=43.76 Aligned_cols=106 Identities=15% Similarity=0.087 Sum_probs=63.0
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.=+++.||| |.-|+ +.+++..+|+. |.+.+ |..... +...|.....+++++.. +.|++++
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-r~~~~~------~~~~g~~~~~~l~ell~---~sDvV~l 233 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGFGLA-------IHYHN-RTRLSH------ALEEGAIYHDTLDSLLG---ASDIFLI 233 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTTTCE-------EEEEC-SSCCCH------HHHTTCEECSSHHHHHH---TCSEEEE
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHCCCE-------EEEEC-CCCcch------hhhcCCeEeCCHHHHHh---hCCEEEE
Confidence 4446888885 32233 78888878653 55666 532110 01115555579999876 4799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+ +-..++|-++--+-.+++.|.+..++..+.
T Consensus 234 ~~Plt~~T~~li~~~~l~~m---k~gailIN~aRG~~vde~aL~~aL~~g~i~ 283 (345)
T 4g2n_A 234 AAPGRPELKGFLDHDRIAKI---PEGAVVINISRGDLINDDALIEALRSKHLF 283 (345)
T ss_dssp CSCCCGGGTTCBCHHHHHHS---CTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred ecCCCHHHHHHhCHHHHhhC---CCCcEEEECCCCchhCHHHHHHHHHhCCce
Confidence 99964222 2333434 334555555433334788888888876554
No 186
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=74.38 E-value=7 Score=42.09 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=68.0
Q ss_pred ecccccCCHHHHhhcCCCccEEEEeccC-hhcHHHHHHHhcCCCCCEEEEecCCCCH--HHHHHHHHHHHhCCCeEE-cC
Q 007327 61 IAIPVHSTVEAACAAHPMADVFINFSSF-RSAAASSMAALKQPTIRVVAIIAEGVPE--ADTKQLIAYARSNNKVVI-GP 136 (608)
Q Consensus 61 ~G~~~y~sv~~i~~~~p~vDlavi~vp~-~~~~~~~le~~~~~gv~~~viis~Gf~e--~~~~~l~~~a~~~g~rvl-GP 136 (608)
.+.+.|.+.+++... +++|++++++|. ....+-+.+++. +|.. ++ |+-=.- ..-++|.+.|+++|..+. -.
T Consensus 62 ~~~~~~~d~~ell~d-~diDvVve~tp~~~~h~~~~~~AL~-aGKh-Vv--tenkal~a~~~~eL~~~A~~~gv~l~~Ea 136 (444)
T 3mtj_A 62 GGLPLTTNPFDVVDD-PEIDIVVELIGGLEPARELVMQAIA-NGKH-VV--TANKHLVAKYGNEIFAAAQAKGVMVTFEA 136 (444)
T ss_dssp TTCCEESCTHHHHTC-TTCCEEEECCCSSTTHHHHHHHHHH-TTCE-EE--ECCHHHHHHHHHHHHHHHHHHTCCEECGG
T ss_pred ccCcccCCHHHHhcC-CCCCEEEEcCCCchHHHHHHHHHHH-cCCE-EE--ECCcccCHHHHHHHHHHHHHhCCeEEEEE
Confidence 356789999998764 369999999996 443444555554 7754 33 332111 145799999999999874 33
Q ss_pred CcccccccCcccccccCCcccccccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEE
Q 007327 137 ATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEG 197 (608)
Q Consensus 137 Nc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~ 197 (608)
+..|. .|....+. .....|.|+=|. -||+..+-+ ....+.|..|+.+
T Consensus 137 ~V~~g-iPii~~Lr------------elL~~~~Ig~I~GIlnGT~nyil-t~m~~~g~~f~~~ 185 (444)
T 3mtj_A 137 AVAGG-IPIIKALR------------EGLTANRIEWLAGIINGTSNFIL-SEMRDKGAAFDDV 185 (444)
T ss_dssp GSSTT-SCHHHHHH------------TTTTTSCEEEEEEECCHHHHHHH-HHHHHHCCCHHHH
T ss_pred eeeCC-hHHHHHHH------------HHHhCCCCceEEEEEcCCccccc-ccCCCCCCCHHHH
Confidence 33332 23210110 112456665554 478776644 3444445555443
No 187
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.21 E-value=3.9 Score=40.32 Aligned_cols=97 Identities=6% Similarity=-0.035 Sum_probs=54.4
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc--ccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP--VHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~--~y~sv~~i~~~~p~vDlavi~ 85 (608)
++++||| |..|. +.+.+.+.|+. |..++ +.... ...+ .-.|++ .+.+++++ . +.|+++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~-------V~~~~-~~~~~-~~~~---~~~g~~~~~~~~~~~~-~---~~D~vi~a 64 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHY-------LIGVS-RQQST-CEKA---VERQLVDEAGQDLSLL-Q---TAKIIFLC 64 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SCHHH-HHHH---HHTTSCSEEESCGGGG-T---TCSEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCE-------EEEEE-CCHHH-HHHH---HhCCCCccccCCHHHh-C---CCCEEEEE
Confidence 4688885 22233 77788887643 55565 32210 0001 012332 46677775 3 48999999
Q ss_pred ccChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHH
Q 007327 86 SSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLI 123 (608)
Q Consensus 86 vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~ 123 (608)
||+.. ...+++++.. ..-+.+|+-.++.+....+++.
T Consensus 65 v~~~~-~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~ 102 (279)
T 2f1k_A 65 TPIQL-ILPTLEKLIPHLSPTAIVTDVASVKTAIAEPAS 102 (279)
T ss_dssp SCHHH-HHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHH
T ss_pred CCHHH-HHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHH
Confidence 99875 6777777653 1223455555667654444443
No 188
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=74.11 E-value=2.8 Score=43.14 Aligned_cols=107 Identities=13% Similarity=0.043 Sum_probs=59.0
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-++++||| |..|+ +.+.+..+|+. |.+++ +.... .... .-.|+... +++++.. +.|++++
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~-------V~~~d-~~~~~-~~~~---~~~g~~~~-~l~e~l~---~aDvVi~ 216 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQ-------RFLYT-GRQPR-PEEA---AEFQAEFV-STPELAA---QSDFIVV 216 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCC-------EEEEE-SSSCC-HHHH---HTTTCEEC-CHHHHHH---HCSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCE-------EEEEC-CCCcc-hhHH---HhcCceeC-CHHHHHh---hCCEEEE
Confidence 5566899995 33333 77788777643 55666 42211 0000 11244433 7888765 3799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+. .| .++|-++..+..++++|.+..++.++.
T Consensus 217 ~vp~~~~t~~~i~~~~~~~mk-~g--ailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 217 ACSLTPATEGLCNKDFFQKMK-ET--AVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp CCCCCTTTTTCBSHHHHHHSC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred eCCCChHHHHhhCHHHHhcCC-CC--cEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 99975322 23444443 23 344444433334567777777776554
No 189
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=74.08 E-value=5.9 Score=45.98 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=75.4
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC--ceeEEeecCCCCCCCC-CHHHH----HHHhhcCCCccEEEEEEecCCcc--
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTD--GIYEGIAIGGDVFPGS-TLSDH----ILRFNNIPQVKMMVVLGELGGRD-- 236 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~--G~s~~vs~Gn~~~~dv-~~~d~----l~~l~~Dp~T~~I~ly~E~g~~~-- 236 (608)
..|+|+.+.-.++++.+.+|.....|- -...|..+|+.+ .. .+.+. ++.+..||++|+|++-+=-|+.+
T Consensus 271 ldG~Ig~mvNGaGlamaTmD~I~~~Gg~~~pANFlDvGGga--~~e~v~~~~~~~l~ii~~d~~vk~ilvNIfGGI~~cd 348 (829)
T 3pff_A 271 PKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGEYSGAP--SEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFT 348 (829)
T ss_dssp TTCSEEECCBSHHHHHHHHHHHHHTTCTTTBCEEEEEESCC--CHHHHHHHHHHHHHHTTSSCCTTCEEEEECBCBCSSC
T ss_pred cCCeEEeeccCchHHHHHHHHHHHcCCCCCCceeEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCccchH
Confidence 489999999999999999999999887 479999999987 32 23333 78888999999999987734432
Q ss_pred --H---HHHHHHHHhC-----CCCCCEEEEEeCCCcc
Q 007327 237 --E---YSLVEALKQG-----KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 237 --~---~~f~~~~r~a-----~~~KPVvvlk~Grs~~ 263 (608)
. +-..+++++. ..++|||+-..|.+..
T Consensus 349 ~VA~tf~GIi~A~k~~~~~~~~~~vPiVVRl~GtN~e 385 (829)
T 3pff_A 349 NVAATFKGIVRAIRDYQGPLKEHEVTIFVRRGGPNYQ 385 (829)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTEEEEEECBSTTHH
T ss_pred HHHHHHhHHHHHHHHhhhhcccCCceEEEECCCCCHH
Confidence 3 4467777774 3589999999888754
No 190
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=74.08 E-value=1.7 Score=44.98 Aligned_cols=106 Identities=18% Similarity=0.036 Sum_probs=61.3
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| | ++..+.+.+..+|+. |.+++ +.... .+ .+ +.....+++++.. +.|++++
T Consensus 144 l~g~~vgIiG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~---~~--~~--~~~~~~~l~ell~---~aDvV~l 205 (333)
T 1j4a_A 144 VRDQVVGVVGTGHIGQVFMQIMEGFGAK-------VITYD-IFRNP---EL--EK--KGYYVDSLDDLYK---QADVISL 205 (333)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCH---HH--HH--TTCBCSCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCE-------EEEEC-CCcch---hH--Hh--hCeecCCHHHHHh---hCCEEEE
Confidence 4556888885 3 223388888888753 55666 53321 01 11 1232338888776 3699999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|..... ...++.+. -..++|-++--+-.+++.|.+..++..+.=
T Consensus 206 ~~p~~~~t~~li~~~~l~~mk---~ga~lIn~arg~~vd~~aL~~aL~~g~i~g 256 (333)
T 1j4a_A 206 HVPDVPANVHMINDESIAKMK---QDVVIVNVSRGPLVDTDAVIRGLDSGKIFG 256 (333)
T ss_dssp CSCCCGGGTTCBSHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHHTSEEE
T ss_pred cCCCcHHHHHHHhHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCceE
Confidence 99964322 23444443 234444444323347888988888876653
No 191
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=74.01 E-value=2.6 Score=44.73 Aligned_cols=111 Identities=12% Similarity=0.038 Sum_probs=62.9
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| | ++..+.+.+..+|+. |.+.+ +..... .. ..-.|+..+.+++++.. +.|++++
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~G~~-------V~~~d-~~~~~~--~~--~~~~G~~~~~~l~ell~---~aDvV~l 253 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPFDVH-------LHYTD-RHRLPE--SV--EKELNLTWHATREDMYP---VCDVVTL 253 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCE-------EEEEC-SSCCCH--HH--HHHHTCEECSSHHHHGG---GCSEEEE
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCE-------EEEEc-CCccch--hh--HhhcCceecCCHHHHHh---cCCEEEE
Confidence 4567888885 3 333378888888653 55666 432210 00 11246666678999876 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 254 NCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp CSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred ecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 999642222222 222323334455544432333778888888876544
No 192
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=73.87 E-value=2.8 Score=42.85 Aligned_cols=102 Identities=15% Similarity=0.048 Sum_probs=58.4
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |..|+ +.+++..+|+. |.+++ +.... .+ + .+.+++++.. +.|++++
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~-------~~---~-~~~~l~ell~---~aDvV~l 199 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGMR-------VVYHA-RTPKP-------LP---Y-PFLSLEELLK---EADVVSL 199 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCS-------SS---S-CBCCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCE-------EEEEC-CCCcc-------cc---c-ccCCHHHHHh---hCCEEEE
Confidence 5566889985 32233 78888888653 56666 53321 11 2 3678888776 3699999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCC
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNK 131 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~ 131 (608)
++|.......++ +.....+-..++|-++.-+-.++++|.+..+ ..+
T Consensus 200 ~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i 247 (311)
T 2cuk_A 200 HTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL 247 (311)
T ss_dssp CCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS
T ss_pred eCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC
Confidence 999863222222 1222223334555444323336777777776 443
No 193
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=73.56 E-value=12 Score=38.09 Aligned_cols=94 Identities=16% Similarity=-0.056 Sum_probs=51.3
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc---cCceeecc---------cccCCHHHHh
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF---FGQEEIAI---------PVHSTVEAAC 73 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~---~g~ev~G~---------~~y~sv~~i~ 73 (608)
++++++||| |..|. +.+.|.+.|+. |..++ .... ....+ .|-.+.+. ..+.+++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~-------V~~~~-r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQS-------VLAWD-IDAQ-RIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV 73 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SCHH-HHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCE-------EEEEe-CCHH-HHHHHHhcCCeEEeccccccccccceecCCHHHHH
Confidence 357899996 23333 66777777643 55555 3111 00011 01122221 3567887755
Q ss_pred hcCCCccEEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCC
Q 007327 74 AAHPMADVFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGV 114 (608)
Q Consensus 74 ~~~p~vDlavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf 114 (608)
. +.|+++++||... ..++++.+.. .+-+.+|+...|+
T Consensus 74 ~---~~D~vi~~v~~~~-~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 74 K---DADVILIVVPAIH-HASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp T---TCSEEEECSCGGG-HHHHHHHHGGGCCTTCEEEESSCC
T ss_pred h---cCCEEEEeCCchH-HHHHHHHHHHhCCCCCEEEEcCCC
Confidence 4 4899999999986 5777777643 2223445544563
No 194
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=73.47 E-value=4 Score=42.82 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=63.8
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++=+++.||| |.-|+ +.+.+..+|+. |.+.+ |.... .. ..-.|+. +.+++++.. +.|++++
T Consensus 174 l~gktvGIIGlG~IG~~vA~~l~~fG~~-------V~~~d-~~~~~--~~---~~~~g~~-~~~l~ell~---~aDvV~l 236 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGKALRRVLSGFRAR-------IRVFD-PWLPR--SM---LEENGVE-PASLEDVLT---KSDFIFV 236 (365)
T ss_dssp SSSSEEEEECCSHHHHHHHHHHTTSCCE-------EEEEC-SSSCH--HH---HHHTTCE-ECCHHHHHH---SCSEEEE
T ss_pred cCCCEEEEecCCcccHHHHHhhhhCCCE-------EEEEC-CCCCH--HH---HhhcCee-eCCHHHHHh---cCCEEEE
Confidence 4456888885 33344 77888877653 55666 53220 00 0113443 568999876 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..+.
T Consensus 237 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 286 (365)
T 4hy3_A 237 VAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV 286 (365)
T ss_dssp CSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE
T ss_pred cCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce
Confidence 999753332222 223333344556655533445889999988888776
No 195
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=73.44 E-value=7.6 Score=39.78 Aligned_cols=52 Identities=13% Similarity=-0.015 Sum_probs=32.3
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCC-CCCEEEE-ecCCCCHH
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQP-TIRVVAI-IAEGVPEA 117 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~-gv~~~vi-is~Gf~e~ 117 (608)
+....+++++.. +.|+++.+||... ....+++++.+. .-..+++ .||+++.+
T Consensus 75 i~~~~~~~eav~---~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~ 129 (319)
T 2dpo_A 75 ISSCTNLAEAVE---GVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS 129 (319)
T ss_dssp EEEECCHHHHTT---TEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH
T ss_pred eEEeCCHHHHHh---cCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH
Confidence 456678887654 4899999999752 334566665532 1222332 57888764
No 196
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=73.28 E-value=1.7 Score=46.85 Aligned_cols=99 Identities=14% Similarity=0.051 Sum_probs=64.1
Q ss_pred CCCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCC--CCccccccCceeecccccCCHHHHhhcCCCcc
Q 007327 5 QLFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGA--EGFQKLFFGQEEIAIPVHSTVEAACAAHPMAD 80 (608)
Q Consensus 5 ~l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~--~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vD 80 (608)
.+|+=++||||| |..|. ...||.|.|. +++.|.- |+. .+.. -....+-.|..++ +++|+.+ ..|
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv------~V~Vglr-~~s~~e~~~-S~~~A~~~Gf~v~-~~~eA~~---~AD 100 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGL------DISYALR-KEAIAEKRA-SWRKATENGFKVG-TYEELIP---QAD 100 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTC------EEEEEEC-HHHHHTTCH-HHHHHHHTTCEEE-EHHHHGG---GCS
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCC------cEEEEeC-CCCcccccc-hHHHHHHCCCEec-CHHHHHH---hCC
Confidence 356778999995 44454 8889999964 4566654 421 1000 0011245677777 6888766 479
Q ss_pred EEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCCCH
Q 007327 81 VFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVPE 116 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e 116 (608)
++++.+|... -..+.+.+.. ..-..++.+|.||..
T Consensus 101 vV~~L~PD~~-q~~vy~~I~p~lk~G~~L~faHGFnI 136 (491)
T 3ulk_A 101 LVINLTPDKQ-HSDVVRTVQPLMKDGAALGYSHGFNI 136 (491)
T ss_dssp EEEECSCGGG-HHHHHHHHGGGSCTTCEEEESSCHHH
T ss_pred EEEEeCChhh-HHHHHHHHHhhCCCCCEEEecCcccc
Confidence 9999999874 5566666542 334588999999953
No 197
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=71.17 E-value=15 Score=39.75 Aligned_cols=65 Identities=15% Similarity=0.102 Sum_probs=39.3
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh--------------cHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHH
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS--------------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYAR 127 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~--------------~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~ 127 (608)
+.+..++.+... +.|+++++||... .+..+.+.+.+ ..-..+||..|..+....+++.+..+
T Consensus 74 l~~t~~~~~~~~---~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~ 150 (481)
T 2o3j_A 74 LFFSSDIPKAIA---EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILR 150 (481)
T ss_dssp EEEESCHHHHHH---HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred EEEECCHHHHhh---cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHH
Confidence 455566656554 3799999998643 15555555542 22346677766666544456766666
Q ss_pred h-CC
Q 007327 128 S-NN 130 (608)
Q Consensus 128 ~-~g 130 (608)
+ .+
T Consensus 151 ~~~~ 154 (481)
T 2o3j_A 151 EAQK 154 (481)
T ss_dssp HHTC
T ss_pred HhhC
Confidence 6 44
No 198
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=71.03 E-value=3.3 Score=43.35 Aligned_cols=112 Identities=12% Similarity=0.014 Sum_probs=63.0
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |.-|+ +.+.+..+|+ +.|.+++ +..... .. ..-.|...+.+++++.. +.|++++
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~------~~V~~~d-~~~~~~-~~---~~~~g~~~~~~l~ell~---~aDvV~l 227 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNP------KELLYYD-YQALPK-DA---EEKVGARRVENIEELVA---QADIVTV 227 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC------SEEEEEC-SSCCCH-HH---HHHTTEEECSSHHHHHH---TCSEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCC------cEEEEEC-CCccch-hH---HHhcCcEecCCHHHHHh---cCCEEEE
Confidence 5667899995 32233 7788887753 3255666 422110 00 01234555568999876 4799999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.+...+-..++|-++--+-.+++.|.+..++.++.
T Consensus 228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~ 277 (364)
T 2j6i_A 228 NAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLR 277 (364)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCc
Confidence 999853222222 122223334455544432333788888888887654
No 199
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=70.96 E-value=3.4 Score=40.57 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=38.1
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCC-cc---HHHHHHHHHhCC--CCCCEEEEEeCCCcc
Q 007327 209 TLSDHILRFNNIPQVKMMVVLGELGG-RD---EYSLVEALKQGK--VNKPVVAWVSGTCAR 263 (608)
Q Consensus 209 ~~~d~l~~l~~Dp~T~~I~ly~E~g~-~~---~~~f~~~~r~a~--~~KPVvvlk~Grs~~ 263 (608)
++.+.|+.+.+||++|+|+|.+. +. .+ ..++.+++++.+ .+||||+..-|....
T Consensus 33 ~l~~~l~~a~~d~~v~~ivL~~~-s~Gg~~~~~~~i~~~l~~~~~~~~kPVia~v~g~a~~ 92 (240)
T 3rst_A 33 TFLKNLERAKDDKTVKGIVLKVN-SPGGGVYESAEIHKKLEEIKKETKKPIYVSMGSMAAS 92 (240)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEE-ECCBCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCcEEEEEEec-CCCCCHHHHHHHHHHHHHHHHhCCCeEEEEECCeehH
Confidence 45667777888999999999998 42 22 344555555544 389999988765543
No 200
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=70.94 E-value=2.2 Score=43.77 Aligned_cols=106 Identities=12% Similarity=0.029 Sum_probs=61.6
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| | ++..+.+++..+|+. |.+++ +..... . ..-.|.. +.+++++.+ +.|++++
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~~--~---~~~~g~~-~~~l~ell~---~aDvVvl 202 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMK-------VLAYD-ILDIRE--K---AEKINAK-AVSLEELLK---NSDVISL 202 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCHH--H---HHHTTCE-ECCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCE-------EEEEC-CCcchh--H---HHhcCce-ecCHHHHHh---hCCEEEE
Confidence 5567888885 3 223378888888753 55666 533210 0 0112444 348888776 3799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+. . ..++|-++.-+-.+++.|.+..++.++.
T Consensus 203 ~~P~~~~t~~li~~~~l~~mk-~--ga~lIn~arg~~vd~~aL~~aL~~g~i~ 252 (313)
T 2ekl_A 203 HVTVSKDAKPIIDYPQFELMK-D--NVIIVNTSRAVAVNGKALLDYIKKGKVY 252 (313)
T ss_dssp CCCCCTTSCCSBCHHHHHHSC-T--TEEEEESSCGGGBCHHHHHHHHHTTCEE
T ss_pred eccCChHHHHhhCHHHHhcCC-C--CCEEEECCCCcccCHHHHHHHHHcCCCc
Confidence 99964322 34445444 2 3455544432334778888888876653
No 201
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.85 E-value=6.4 Score=38.83 Aligned_cols=105 Identities=10% Similarity=-0.042 Sum_probs=55.2
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeeccc--ccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP--VHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~--~y~sv~~i~~~~p~vDlavi~ 85 (608)
++++||| |..|. +.+.+.+.|+. ..|.+++ +.... .... .-.|+. .+.++.++... +.|+++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~-----~~V~~~d-~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~--~aDvVila 69 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFK-----GKIYGYD-INPES-ISKA---VDLGIIDEGTTSIAKVEDF--SPDFVMLS 69 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCC-----SEEEEEC-SCHHH-HHHH---HHTTSCSEEESCGGGGGGT--CCSEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCC-----cEEEEEe-CCHHH-HHHH---HHCCCcccccCCHHHHhcC--CCCEEEEc
Confidence 4688885 22233 77788877651 1255666 42210 0000 012332 35567665431 27999999
Q ss_pred ccChhcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHH
Q 007327 86 SSFRSAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYAR 127 (608)
Q Consensus 86 vp~~~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~ 127 (608)
||+.. ...+++++.. .+-+.+|+..++......+++.+...
T Consensus 70 vp~~~-~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~ 111 (281)
T 2g5c_A 70 SPVRT-FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG 111 (281)
T ss_dssp SCHHH-HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG
T ss_pred CCHHH-HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhcc
Confidence 99975 5566665532 12234566556665444445555443
No 202
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=70.81 E-value=21 Score=34.74 Aligned_cols=89 Identities=9% Similarity=-0.039 Sum_probs=49.3
Q ss_pred CCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccE
Q 007327 6 LFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADV 81 (608)
Q Consensus 6 l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDl 81 (608)
.++.+++.|.| .+|. +++.|++.|+. .......+. . . ...+.-..++.++.... ++|.
T Consensus 3 ~~~~~~vlVtG-atG~iG~~l~~~L~~~g~~---~~~~~~~~~-~-~-----------~~D~~d~~~~~~~~~~~-~~d~ 64 (319)
T 4b8w_A 3 YFQSMRILVTG-GSGLVGKAIQKVVADGAGL---PGEDWVFVS-S-K-----------DADLTDTAQTRALFEKV-QPTH 64 (319)
T ss_dssp CCCCCEEEEET-CSSHHHHHHHHHHHTTTCC---TTCEEEECC-T-T-----------TCCTTSHHHHHHHHHHS-CCSE
T ss_pred cccCCeEEEEC-CCcHHHHHHHHHHHhcCCc---ccccccccC-c-e-----------ecccCCHHHHHHHHhhc-CCCE
Confidence 45667777774 4433 78888887652 111111111 1 0 11222334556665543 3798
Q ss_pred EEEeccChh------------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 82 FINFSSFRS------------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 82 avi~vp~~~------------------~~~~~le~~~~~gv~~~viis~ 112 (608)
+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 886643311 0124789998899998888776
No 203
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.70 E-value=9.2 Score=41.09 Aligned_cols=63 Identities=10% Similarity=0.125 Sum_probs=40.4
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh---------cHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHh
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS---------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARS 128 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~---------~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~ 128 (608)
+....+++++.. +.|+++++||... .+..+++.+.+ ..-..+||..|.++....+++.+..++
T Consensus 66 l~~t~d~~ea~~---~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 66 LRFGTEIEQAVP---EADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EEEESCHHHHGG---GCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEECCHHHHHh---cCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 556678887655 3799999999872 36666666653 233466777777765544455555544
No 204
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=70.50 E-value=12 Score=35.52 Aligned_cols=86 Identities=8% Similarity=-0.065 Sum_probs=54.1
Q ss_pred CcEEEEEcCCch---HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhh--cCCCccEEEE
Q 007327 10 TTQALFYNYKQL---PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACA--AHPMADVFIN 84 (608)
Q Consensus 10 ~s~avv~g~~~~---~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~--~~p~vDlavi 84 (608)
+.++|+ |+++- +++.+.+.+| +.++.++ ..... .++.|+|++.+.+++.. .. .+|.+++
T Consensus 13 k~v~Ii-GAGg~g~~v~~~l~~~~~------~~vgfiD-d~~~~-------~~~~g~~Vlg~~~~~~~~~~~-~~~~v~i 76 (220)
T 4ea9_A 13 GGVVII-GGGGHAKVVIESLRACGE------TVAAIVD-ADPTR-------RAVLGVPVVGDDLALPMLREQ-GLSRLFV 76 (220)
T ss_dssp SCEEEE-CCSHHHHHHHHHHHHTTC------CEEEEEC-SCC----------CBTTBCEEESGGGHHHHHHT-TCCEEEE
T ss_pred CCEEEE-cCCHHHHHHHHHHHhCCC------EEEEEEe-CCccc-------CcCCCeeEECCHHHHHHhhcc-cccEEEE
Confidence 345556 66654 6666666555 3566666 32210 24788999887655432 11 3678899
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEec
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIA 111 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis 111 (608)
++|....-..+.+.|.+.|++...++.
T Consensus 77 AIg~~~~R~~i~~~l~~~g~~~~~~i~ 103 (220)
T 4ea9_A 77 AIGDNRLRQKLGRKARDHGFSLVNAIH 103 (220)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEECCEEC
T ss_pred ecCCHHHHHHHHHHHHhcCCCcCCcCC
Confidence 999876667888888888877665554
No 205
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=70.44 E-value=2.8 Score=42.79 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=61.4
Q ss_pred CCCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 6 LFSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 6 l~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
-+.-+++.||| | ++..+.+.+..+|+. |.+++ +.... ... .-.|... .+++++.. +.|+++
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-------V~~~d-~~~~~--~~~---~~~g~~~-~~l~ell~---~aDvV~ 201 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGMN-------ILLYD-PYPNE--ERA---KEVNGKF-VDLETLLK---ESDVVT 201 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCH--HHH---HHTTCEE-CCHHHHHH---HCSEEE
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCCE-------EEEEC-CCCCh--hhH---hhcCccc-cCHHHHHh---hCCEEE
Confidence 35667889985 3 333378888888653 55666 53321 000 1124443 37888776 379999
Q ss_pred EeccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 84 NFSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 84 i~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+++|..... ...++.+. . ..++|-++.-+-.+++.|.+..++..+.
T Consensus 202 l~~p~~~~t~~li~~~~l~~mk-~--ga~lin~arg~~vd~~aL~~aL~~g~i~ 252 (307)
T 1wwk_A 202 IHVPLVESTYHLINEERLKLMK-K--TAILINTSRGPVVDTNALVKALKEGWIA 252 (307)
T ss_dssp ECCCCSTTTTTCBCHHHHHHSC-T--TCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred EecCCChHHhhhcCHHHHhcCC-C--CeEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 999964311 23444443 2 3445544432333677888888876654
No 206
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=70.38 E-value=1.6 Score=45.59 Aligned_cols=111 Identities=12% Similarity=0.044 Sum_probs=65.1
Q ss_pred CCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| | ++..+.+++..+|+. |.+.+ +.... .. ..-.|+..+.+++++... .|++++
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-~~~~~--~~---~~~~g~~~~~~l~ell~~---aDiV~l 221 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAFGMN-------VLVWG-RENSK--ER---ARADGFAVAESKDALFEQ---SDVLSV 221 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SHHHH--HH---HHHTTCEECSSHHHHHHH---CSEEEE
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhCCCE-------EEEEC-CCCCH--HH---HHhcCceEeCCHHHHHhh---CCEEEE
Confidence 4556888885 3 333378888888753 55666 52210 00 012456666799998763 699999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++..++-
T Consensus 222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~g 272 (352)
T 3gg9_A 222 HLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGM 272 (352)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSE
T ss_pred eccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccE
Confidence 999653222211 2233233345555555433347788888888877653
No 207
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=70.17 E-value=3 Score=42.98 Aligned_cols=106 Identities=11% Similarity=0.056 Sum_probs=59.6
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-++++||| |.-|+ +.+.+..+|+. |.+++ +.... ... .-.|+. +.+++++.. +.|++++
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~-------V~~~d-~~~~~--~~~---~~~g~~-~~~l~~~l~---~aDvVil 210 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMR-------ILYYS-RTRKE--EVE---RELNAE-FKPLEDLLR---ESDFVVL 210 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCH--HHH---HHHCCE-ECCHHHHHH---HCSEEEE
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCE-------EEEEC-CCcch--hhH---hhcCcc-cCCHHHHHh---hCCEEEE
Confidence 5567899995 33333 77788877653 55666 43321 000 112443 357888766 3799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+. .| .++|-++--+..++++|.+..++..+.
T Consensus 211 ~vp~~~~t~~~i~~~~~~~mk-~~--ailIn~srg~~v~~~aL~~aL~~~~i~ 260 (334)
T 2dbq_A 211 AVPLTRETYHLINEERLKLMK-KT--AILINIARGKVVDTNALVKALKEGWIA 260 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSC-TT--CEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred CCCCChHHHHhhCHHHHhcCC-CC--cEEEECCCCcccCHHHHHHHHHhCCee
Confidence 99986422 23344443 23 344444432333667777777775543
No 208
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=69.61 E-value=2.2 Score=43.25 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=30.1
Q ss_pred cccC--CHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEE-ecCCC
Q 007327 64 PVHS--TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAI-IAEGV 114 (608)
Q Consensus 64 ~~y~--sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~vi-is~Gf 114 (608)
.+.. +++++.. +.|+++++||+.. +.++++.+...+-+.+|| ++.|+
T Consensus 58 ~~~~~~~~~~~~~---~~D~vi~~v~~~~-~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 58 EIFWPEQLEKCLE---NAEVVLLGVSTDG-VLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp EEECGGGHHHHHT---TCSEEEECSCGGG-HHHHHHHHTTTCCSCEEEECCCSE
T ss_pred EEecHHhHHHHHh---cCCEEEEcCChHH-HHHHHHHHhcCCCCCEEEEEcCcC
Confidence 4455 6766544 4899999999985 788888776311123443 34487
No 209
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=69.41 E-value=8.1 Score=39.41 Aligned_cols=50 Identities=18% Similarity=0.115 Sum_probs=33.3
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCC-C-CCEEEEecCCCC
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVP 115 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~-g-v~~~viis~Gf~ 115 (608)
++....+++++.. +.|+++++||+.. +.++++.+... + =..+|.++.|+.
T Consensus 77 ~~~~~~~~~~~~~---~aD~Vilav~~~~-~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 77 NVVAVPDVVQAAE---DADILIFVVPHQF-IGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TEEEESSHHHHHT---TCSEEEECCCGGG-HHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CeEEEcCHHHHHc---CCCEEEEeCCHHH-HHHHHHHHHhhCCCCCEEEEECCccC
Confidence 3455677777554 4799999999864 78888887632 1 123455566875
No 210
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=68.65 E-value=6.1 Score=37.82 Aligned_cols=92 Identities=14% Similarity=0.033 Sum_probs=50.4
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEE-EeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAG-IINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~-v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
-++++||| |.-|. +.+.+.+.|+. |.. .+ +... ..+.+ .+-.|+..+.+..+... +.|+++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~-------V~~v~~-r~~~-~~~~l--~~~~g~~~~~~~~~~~~---~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIP-------AIIANS-RGPA-SLSSV--TDRFGASVKAVELKDAL---QADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCC-------EEEECT-TCGG-GGHHH--HHHHTTTEEECCHHHHT---TSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-------EEEEEC-CCHH-HHHHH--HHHhCCCcccChHHHHh---cCCEEEEe
Confidence 35889996 22233 77888887653 333 33 3222 11110 01124555444444443 47999999
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
||+.. +.++++++....-+.+|-++.|+.
T Consensus 89 vp~~~-~~~v~~~l~~~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 89 VPYDS-IADIVTQVSDWGGQIVVDASNAID 117 (220)
T ss_dssp SCGGG-HHHHHTTCSCCTTCEEEECCCCBC
T ss_pred CChHH-HHHHHHHhhccCCCEEEEcCCCCC
Confidence 99875 778888775322233444455763
No 211
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=68.41 E-value=2 Score=45.51 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=64.6
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
++-+++.||| |.-|+ +.+++..+|+. |.+++ |... +..+...|.+++++... .|++++
T Consensus 117 l~gktvGIIGlG~IG~~vA~~l~a~G~~-------V~~~d-~~~~---------~~~~~~~~~sl~ell~~---aDiV~l 176 (381)
T 3oet_A 117 LRDRTIGIVGVGNVGSRLQTRLEALGIR-------TLLCD-PPRA---------ARGDEGDFRTLDELVQE---ADVLTF 176 (381)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-HHHH---------HTTCCSCBCCHHHHHHH---CSEEEE
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCE-------EEEEC-CChH---------HhccCcccCCHHHHHhh---CCEEEE
Confidence 3456888885 33333 88888888753 55666 5221 00012357899998763 699999
Q ss_pred eccChhc--------H-HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 85 FSSFRSA--------A-ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 85 ~vp~~~~--------~-~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
++|.... + ...++.+. -..++|-++--+-.+++.|.+..++.++.-.|
T Consensus 177 ~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~aRG~vvde~aL~~aL~~g~i~gA~ 233 (381)
T 3oet_A 177 HTPLYKDGPYKTLHLADETLIRRLK---PGAILINACRGPVVDNAALLARLNAGQPLSVV 233 (381)
T ss_dssp CCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTCCEEEE
T ss_pred cCcCCccccccchhhcCHHHHhcCC---CCcEEEECCCCcccCHHHHHHHHHhCCCeEEE
Confidence 9995432 1 23444443 34455555433334788898888887765433
No 212
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=68.24 E-value=1.9 Score=45.61 Aligned_cols=104 Identities=14% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-+++.||| |..|+ +.+++..+|+. |.+.+ |.... .-.|. .+.+++++.. +.|++++
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~G~~-------V~~~d-~~~~~--------~~~g~-~~~~l~ell~---~aDvV~l 173 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGLGWK-------VLVCD-PPRQA--------REPDG-EFVSLERLLA---EADVISL 173 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-HHHHH--------HSTTS-CCCCHHHHHH---HCSEEEE
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHCCCE-------EEEEc-CChhh--------hccCc-ccCCHHHHHH---hCCEEEE
Confidence 4557889995 33333 78888888753 55666 52210 00122 4678999876 3799999
Q ss_pred eccChhc--------H-HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSA--------A-ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~--------~-~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|.... + ...++.+. -..++|-++--+-.+++.|.+..++.++.-
T Consensus 174 ~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sRG~vvd~~aL~~aL~~g~i~~ 228 (380)
T 2o4c_A 174 HTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASRGAVVDNQALRRLLEGGADLE 228 (380)
T ss_dssp CCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSCGGGBCHHHHHHHHHTTCCEE
T ss_pred eccCccccccchhhhcCHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCCce
Confidence 9996542 1 23444433 345555454323337788888888776653
No 213
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=67.01 E-value=3.8 Score=42.74 Aligned_cols=108 Identities=11% Similarity=0.026 Sum_probs=64.8
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.=+++.||| |..|+ +.+.+..+|+. |.+.+ +.... ... ..-.|+..+.+++++.. +.|++++
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~-------V~~~d-r~~~~-~~~---~~~~g~~~~~~l~ell~---~aDvV~l 226 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCN-------LLYHD-RLQMA-PEL---EKETGAKFVEDLNEMLP---KCDVIVI 226 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCE-------EEEEC-SSCCC-HHH---HHHHCCEECSCHHHHGG---GCSEEEE
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCE-------EEEeC-CCccC-HHH---HHhCCCeEcCCHHHHHh---cCCEEEE
Confidence 4556888885 33333 78888888653 55666 42210 000 01235666678999876 4799999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|..... ...++.+. -..++|-++--+-.+++.|.+..++..+.
T Consensus 227 ~~Plt~~t~~li~~~~l~~mk---~gailIN~aRG~~vde~aL~~aL~~g~i~ 276 (351)
T 3jtm_A 227 NMPLTEKTRGMFNKELIGKLK---KGVLIVNNARGAIMERQAVVDAVESGHIG 276 (351)
T ss_dssp CSCCCTTTTTCBSHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred CCCCCHHHHHhhcHHHHhcCC---CCCEEEECcCchhhCHHHHHHHHHhCCcc
Confidence 99963212 33444443 34555555543334788888888887655
No 214
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=65.63 E-value=7.8 Score=39.87 Aligned_cols=46 Identities=15% Similarity=0.230 Sum_probs=31.5
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
+++|.+.+++.. ++|++++|+|.......+ +.+.++|.+ |+++..+
T Consensus 67 ~~v~~d~~~l~~---~vDvV~~aTp~~~h~~~a-~~~l~aGk~--Vi~sap~ 112 (334)
T 2czc_A 67 FEVAGTLNDLLE---KVDIIVDATPGGIGAKNK-PLYEKAGVK--AIFQGGE 112 (334)
T ss_dssp CCCSCBHHHHHT---TCSEEEECCSTTHHHHHH-HHHHHHTCE--EEECTTS
T ss_pred eEEcCcHHHhcc---CCCEEEECCCccccHHHH-HHHHHcCCc--eEeeccc
Confidence 478889998764 589999999986534444 455557854 4456554
No 215
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=65.34 E-value=23 Score=34.95 Aligned_cols=88 Identities=7% Similarity=-0.032 Sum_probs=49.8
Q ss_pred CcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCCccEEE
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~e--v~G~~~y~sv~~i~~~~p~vDlav 83 (608)
+++.|. |++|. +++.|++.||. |.++.-. .. ... +.+-+ ...+. ..++.++.. ++|.+|
T Consensus 3 ~~vlVt-GatG~iG~~l~~~L~~~g~~-------V~~~~r~-~~-~~~-~~~~~~~~~Dl~-~~~~~~~~~---~~d~Vi 67 (311)
T 3m2p_A 3 LKIAVT-GGTGFLGQYVVESIKNDGNT-------PIILTRS-IG-NKA-INDYEYRVSDYT-LEDLINQLN---DVDAVV 67 (311)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHTTCE-------EEEEESC-CC-------CCEEEECCCC-HHHHHHHTT---TCSEEE
T ss_pred CEEEEE-CCCcHHHHHHHHHHHhCCCE-------EEEEeCC-CC-ccc-CCceEEEEcccc-HHHHHHhhc---CCCEEE
Confidence 455555 54444 88888888753 4454412 11 101 11111 12344 456666654 489988
Q ss_pred EeccChh-------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 84 NFSSFRS-------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 84 i~vp~~~-------------~~~~~le~~~~~gv~~~viis~ 112 (608)
-+..... ....++++|.+.|++.+|.+|+
T Consensus 68 h~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 68 HLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp ECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7654321 1256889999899998888875
No 216
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=65.08 E-value=12 Score=40.23 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=39.1
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChhc--------------HHHHHHHhcCC-CCCEEEEecCCCCHHHHHHHHHHH
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRSA--------------AASSMAALKQP-TIRVVAIIAEGVPEADTKQLIAYA 126 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~--------------~~~~le~~~~~-gv~~~viis~Gf~e~~~~~l~~~a 126 (608)
++....+++++.. +.|+++++||.... +..+.+.+.+. .-..+||..|..+....+++.+..
T Consensus 69 ~~~~t~~~~e~~~---~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l 145 (467)
T 2q3e_A 69 NLFFSTNIDDAIK---EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIF 145 (467)
T ss_dssp TEEEESCHHHHHH---HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHH
T ss_pred CEEEECCHHHHHh---cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHH
Confidence 5666678777655 37999999986442 23445544421 223456655555544455576666
Q ss_pred HhCC
Q 007327 127 RSNN 130 (608)
Q Consensus 127 ~~~g 130 (608)
.+.+
T Consensus 146 ~~~~ 149 (467)
T 2q3e_A 146 DANT 149 (467)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 6654
No 217
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=65.07 E-value=6.1 Score=41.71 Aligned_cols=60 Identities=12% Similarity=0.053 Sum_probs=34.4
Q ss_pred cccCCHHHHhhcCCCccEEEEeccChh----------cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHH
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFRS----------AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYA 126 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~~----------~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a 126 (608)
....+..+... +.|+++++||... .+.++++.+...+-+.+||..+..+....+++.+..
T Consensus 62 ~~t~~~~~~~~---~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~ 131 (402)
T 1dlj_A 62 KATLDSKAAYK---EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKF 131 (402)
T ss_dssp EEESCHHHHHH---HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHT
T ss_pred EEeCCHHHHhc---CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHh
Confidence 44556655544 3799999999973 266666666532334566653333333344554443
No 218
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=64.46 E-value=6.2 Score=39.26 Aligned_cols=39 Identities=13% Similarity=0.079 Sum_probs=30.9
Q ss_pred HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 92 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 92 ~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++...+.|.+.|+.+++|.- .+-+..+++++.++++|+.
T Consensus 105 ~e~F~~~~~~aGvdG~IipD--LP~eE~~~~~~~~~~~Gl~ 143 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVPE--LSFEESDDLIKECERYNIA 143 (252)
T ss_dssp HHHHHHHHHHTTEEEEECTT--CCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCEEEeCC--CCHHHHHHHHHHHHHcCCe
Confidence 57788999999999988744 4544577899999999975
No 219
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=63.80 E-value=51 Score=34.29 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=38.1
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEe-cCCC----------CHHHHHHHHHHHHhCCC-eEEcCCcc
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAII-AEGV----------PEADTKQLIAYARSNNK-VVIGPATV 139 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~vii-s~Gf----------~e~~~~~l~~~a~~~g~-rvlGPNc~ 139 (608)
++|+++.|+|... .....+.+.++|+|.+||= |+-| +|.-.+++. -++..|+ .|..|||-
T Consensus 65 ~~DvVf~a~g~~~-s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~-~~~~~g~~~Ianp~Ct 136 (367)
T 1t4b_A 65 ALDIIVTCQGGDY-TNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVIT-DGLNNGIRTFVGGNCT 136 (367)
T ss_dssp TCSEEEECSCHHH-HHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHH-HHHHTTCCEEEECCHH
T ss_pred CCCEEEECCCchh-HHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHh-hhhhcCCCEEEeCCHH
Confidence 4899999999764 4556666667899765554 4433 333344443 2334564 68899994
No 220
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=63.78 E-value=4.5 Score=41.73 Aligned_cols=109 Identities=7% Similarity=-0.008 Sum_probs=60.7
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.-++++||| |.-|+ +.+.+..+|+. |.+++ +.... ... .-.|+. +.+++++.. +.|++++
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~-------V~~~d-~~~~~--~~~---~~~g~~-~~~l~e~l~---~aDiVil 206 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVK-------LYYWS-RHRKV--NVE---KELKAR-YMDIDELLE---KSDIVIL 206 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCE-------EEEEC-SSCCH--HHH---HHHTEE-ECCHHHHHH---HCSEEEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCE-------EEEEC-CCcch--hhh---hhcCce-ecCHHHHHh---hCCEEEE
Confidence 5567899995 33333 77788777643 55666 43221 000 112443 347888765 3799999
Q ss_pred eccChhcHH-----HHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcC
Q 007327 85 FSSFRSAAA-----SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 85 ~vp~~~~~~-----~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGP 136 (608)
++|...... ..++.+. .| ++|-++--...++++|.+..++..++-.|-
T Consensus 207 ~vp~~~~t~~~i~~~~~~~mk-~g---ilin~srg~~vd~~aL~~aL~~~~i~gagl 259 (333)
T 2d0i_A 207 ALPLTRDTYHIINEERVKKLE-GK---YLVNIGRGALVDEKAVTEAIKQGKLKGYAT 259 (333)
T ss_dssp CCCCCTTTTTSBCHHHHHHTB-TC---EEEECSCGGGBCHHHHHHHHHTTCBCEEEE
T ss_pred cCCCChHHHHHhCHHHHhhCC-CC---EEEECCCCcccCHHHHHHHHHcCCceEEEe
Confidence 999862121 2344444 44 444444223336677777777765554443
No 221
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=63.78 E-value=29 Score=33.74 Aligned_cols=43 Identities=16% Similarity=0.127 Sum_probs=29.5
Q ss_pred CCHHHHhhcCCCccEEEEeccCh-------hcHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFR-------SAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~-------~~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. .+|.+|.+.+.. .....++++|.+.|++.+|.+|+
T Consensus 57 ~~l~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 57 ESMVEAFK---GMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp HHHHHHTT---TCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHh---CCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 34444443 489988766542 12357889999899999888876
No 222
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=63.08 E-value=4.9 Score=41.48 Aligned_cols=110 Identities=8% Similarity=0.018 Sum_probs=61.7
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.=+++.||| |.-|+ +.+++..+|+. |.+.+ |..... .. ..-.|.. |.+++++... .|++++
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~G~~-------V~~~d-~~~~~~-~~---~~~~g~~-~~~l~ell~~---aDvV~l 206 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGWGAT-------LQYHE-AKALDT-QT---EQRLGLR-QVACSELFAS---SDFILL 206 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTSCCE-------EEEEC-SSCCCH-HH---HHHHTEE-ECCHHHHHHH---CSEEEE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCCE-------EEEEC-CCCCcH-hH---HHhcCce-eCCHHHHHhh---CCEEEE
Confidence 3456888885 33333 77788777653 55666 532100 00 0123443 4589998763 699999
Q ss_pred eccChhcHHHHH--HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 85 FSSFRSAAASSM--AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 85 ~vp~~~~~~~~l--e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
++|.......++ +.....+-..++|-++--+-.+++.|.+..++.++.
T Consensus 207 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~ 256 (330)
T 4e5n_A 207 ALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG 256 (330)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred cCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc
Confidence 999542222221 223323334455544433334788888888887665
No 223
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=61.31 E-value=5.5 Score=41.17 Aligned_cols=106 Identities=12% Similarity=-0.004 Sum_probs=61.6
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+.=+++.||| |.-|+ +.+++..+|+. |.+++ +..... . +-.|.. |.+++|+.. +.|++++
T Consensus 139 l~g~tvgIiG~G~IG~~vA~~l~~~G~~-------V~~~d-~~~~~~---~---~~~g~~-~~~l~ell~---~aDvV~l 200 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGSRVAMYGLAFGMK-------VLCYD-VVKRED---L---KEKGCV-YTSLDELLK---ESDVISL 200 (334)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCHH---H---HHTTCE-ECCHHHHHH---HCSEEEE
T ss_pred ccCceEEEECcCHHHHHHHHHHHHCcCE-------EEEEC-CCcchh---h---HhcCce-ecCHHHHHh---hCCEEEE
Confidence 3445788885 33344 78888888653 56666 533210 0 012443 446888876 3699999
Q ss_pred eccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 85 FSSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 85 ~vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
++|..... ...++.+. -..++|-++--+-.+++.|.+..++..+.-
T Consensus 201 ~~P~t~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~~g~i~g 251 (334)
T 2pi1_A 201 HVPYTKETHHMINEERISLMK---DGVYLINTARGKVVDTDALYRAYQRGKFSG 251 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTCEEE
T ss_pred eCCCChHHHHhhCHHHHhhCC---CCcEEEECCCCcccCHHHHHHHHHhCCceE
Confidence 99963212 23344443 344555554333347888888888776653
No 224
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=61.20 E-value=48 Score=33.06 Aligned_cols=91 Identities=7% Similarity=-0.031 Sum_probs=49.0
Q ss_pred CCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 7 FSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
.+++++.|. |++|- +++.|++.||. ++.....+.+. ....+ ...+.-..++.++.. ++|.+
T Consensus 17 ~~~~~vlVt-GatG~iG~~l~~~L~~~G~~------V~~~~r~~~~~-~~~~~----~~Dl~d~~~~~~~~~---~~d~v 81 (347)
T 4id9_A 17 RGSHMILVT-GSAGRVGRAVVAALRTQGRT------VRGFDLRPSGT-GGEEV----VGSLEDGQALSDAIM---GVSAV 81 (347)
T ss_dssp ----CEEEE-TTTSHHHHHHHHHHHHTTCC------EEEEESSCCSS-CCSEE----ESCTTCHHHHHHHHT---TCSEE
T ss_pred cCCCEEEEE-CCCChHHHHHHHHHHhCCCE------EEEEeCCCCCC-CccEE----ecCcCCHHHHHHHHh---CCCEE
Confidence 456677777 44433 88888888753 33333312211 11111 123333445556554 48988
Q ss_pred EEeccChh---------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 83 INFSSFRS---------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 83 vi~vp~~~---------------~~~~~le~~~~~gv~~~viis~ 112 (608)
|-+..... ....++++|.+.|++.+|.+|+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 82 LHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp EECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred EECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 86543211 1245788898899999988887
No 225
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=61.19 E-value=19 Score=37.08 Aligned_cols=36 Identities=3% Similarity=-0.032 Sum_probs=26.4
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++|+++.++|... .....+.+.++|+| +|.+|+-|.
T Consensus 68 ~~DvV~~a~g~~~-s~~~a~~~~~aG~k-vId~Sa~~r 103 (340)
T 2hjs_A 68 SVGLAFFAAAAEV-SRAHAERARAAGCS-VIDLSGALE 103 (340)
T ss_dssp GCSEEEECSCHHH-HHHHHHHHHHTTCE-EEETTCTTT
T ss_pred CCCEEEEcCCcHH-HHHHHHHHHHCCCE-EEEeCCCCC
Confidence 3899999998764 45566667678998 666676664
No 226
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=60.70 E-value=36 Score=28.04 Aligned_cols=78 Identities=10% Similarity=0.035 Sum_probs=55.5
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC-
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG- 247 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a- 247 (608)
+|-+|...-.....+...+.+.|. .+... .+..+.++++.+.+ ..+|++-++....++.++++.+|+.
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~g~---~v~~~-------~~~~~a~~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~~ 73 (127)
T 3i42_A 5 QALIVEDYQAAAETFKELLEMLGF---QADYV-------MSGTDALHAMSTRG-YDAVFIDLNLPDTSGLALVKQLRALP 73 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTE---EEEEE-------SSHHHHHHHHHHSC-CSEEEEESBCSSSBHHHHHHHHHHSC
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCC---CEEEE-------CCHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHHhhh
Confidence 578888888888888787877654 22222 23467888887654 6778877775556899999999986
Q ss_pred -CCCCCEEEEE
Q 007327 248 -KVNKPVVAWV 257 (608)
Q Consensus 248 -~~~KPVvvlk 257 (608)
....|||++-
T Consensus 74 ~~~~~~ii~~s 84 (127)
T 3i42_A 74 MEKTSKFVAVS 84 (127)
T ss_dssp CSSCCEEEEEE
T ss_pred ccCCCCEEEEE
Confidence 4567877774
No 227
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=60.56 E-value=22 Score=36.89 Aligned_cols=104 Identities=12% Similarity=-0.017 Sum_probs=51.1
Q ss_pred CccCCCCCCCcEEEEEcCCch----HHHHHhhCc-ccCCCCCCcEEEEeCCCCCCc-cccccCceeec---ccccC-CHH
Q 007327 1 MATGQLFSKTTQALFYNYKQL----PIQRMLDFD-FLCGRETPSVAGIINPGAEGF-QKLFFGQEEIA---IPVHS-TVE 70 (608)
Q Consensus 1 ~~~~~l~~p~s~avv~g~~~~----~~~~l~~~~-~~~~~g~~~v~~v~~p~~~~~-~~~~~g~ev~G---~~~y~-sv~ 70 (608)
|-++.+...++++|+ |++|. +++.|++.+ |.- -..+++.... ....|+ ....++ .+.| +.+-. +.+
T Consensus 1 ~~~~~~M~m~kVaIv-GATG~vG~~llr~L~~~~~~~~-~~~ei~~l~s-~~~agk~~~~~~~-~l~~~~~~~~~~~~~~ 76 (352)
T 2nqt_A 1 MQNRQVANATKVAVA-GASGYAGGEILRLLLGHPAYAD-GRLRIGALTA-ATSAGSTLGEHHP-HLTPLAHRVVEPTEAA 76 (352)
T ss_dssp -----CCSCEEEEEE-TTTSHHHHHHHHHHHTCHHHHT-TSEEEEEEEE-SSCTTSBGGGTCT-TCGGGTTCBCEECCHH
T ss_pred CCccccccCCEEEEE-CCCCHHHHHHHHHHHcCCCCCC-ccEEEEEEEC-CCcCCCchhhhcc-cccccceeeeccCCHH
Confidence 455666654577888 65555 778888775 210 0012333333 222221 111111 0111 11111 223
Q ss_pred HHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 71 AACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 71 ~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++ . ++|+++.|+|... .....+.+ ++|++ +|.+|+-|.
T Consensus 77 ~~-~---~~DvVf~alg~~~-s~~~~~~~-~~G~~-vIDlSa~~R 114 (352)
T 2nqt_A 77 VL-G---GHDAVFLALPHGH-SAVLAQQL-SPETL-IIDCGADFR 114 (352)
T ss_dssp HH-T---TCSEEEECCTTSC-CHHHHHHS-CTTSE-EEECSSTTT
T ss_pred Hh-c---CCCEEEECCCCcc-hHHHHHHH-hCCCE-EEEECCCcc
Confidence 32 2 4899999999865 45667777 78975 677787775
No 228
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=60.48 E-value=8.7 Score=38.09 Aligned_cols=73 Identities=15% Similarity=0.060 Sum_probs=43.4
Q ss_pred CcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
++++|| |.+|+ +.+.+.+.||. |..++ +... ..+.+. + .|+.+. +..++.. +.|+++++
T Consensus 12 m~I~iI-G~tG~mG~~la~~l~~~g~~-------V~~~~-r~~~-~~~~~~--~-~g~~~~-~~~~~~~---~aDvVi~a 74 (286)
T 3c24_A 12 KTVAIL-GAGGKMGARITRKIHDSAHH-------LAAIE-IAPE-GRDRLQ--G-MGIPLT-DGDGWID---EADVVVLA 74 (286)
T ss_dssp CEEEEE-TTTSHHHHHHHHHHHHSSSE-------EEEEC-CSHH-HHHHHH--H-TTCCCC-CSSGGGG---TCSEEEEC
T ss_pred CEEEEE-CCCCHHHHHHHHHHHhCCCE-------EEEEE-CCHH-HHHHHH--h-cCCCcC-CHHHHhc---CCCEEEEc
Confidence 378888 65333 77888888653 44555 3221 001110 1 244443 5555444 47999999
Q ss_pred ccChhcHHHHHHHhc
Q 007327 86 SSFRSAAASSMAALK 100 (608)
Q Consensus 86 vp~~~~~~~~le~~~ 100 (608)
||+.. +..+++++.
T Consensus 75 v~~~~-~~~v~~~l~ 88 (286)
T 3c24_A 75 LPDNI-IEKVAEDIV 88 (286)
T ss_dssp SCHHH-HHHHHHHHG
T ss_pred CCchH-HHHHHHHHH
Confidence 99976 778888775
No 229
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=60.46 E-value=45 Score=27.50 Aligned_cols=80 Identities=11% Similarity=0.052 Sum_probs=55.9
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCC-ccHHHHHHHHHh
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG-RDEYSLVEALKQ 246 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~-~~~~~f~~~~r~ 246 (608)
-+|-+|...-.....+...+.+.|+ . ++.. -+..+.++.+.+.+...+|++-++..- .++.++++.+++
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~ 75 (132)
T 2rdm_A 6 VTILLADDEAILLLDFESTLTDAGF--L-VTAV-------SSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVARE 75 (132)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHH
T ss_pred ceEEEEcCcHHHHHHHHHHHHHcCC--E-EEEE-------CCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHh
Confidence 4688888888887777777776554 2 2222 234678888887645677777766333 578899999988
Q ss_pred CCCCCCEEEEE
Q 007327 247 GKVNKPVVAWV 257 (608)
Q Consensus 247 a~~~KPVvvlk 257 (608)
.....|||++-
T Consensus 76 ~~~~~~ii~~s 86 (132)
T 2rdm_A 76 IDPNMPIVYIS 86 (132)
T ss_dssp HCTTCCEEEEE
T ss_pred cCCCCCEEEEe
Confidence 66678998884
No 230
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=60.13 E-value=20 Score=38.45 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=42.7
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh----------cHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHhC
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS----------AAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARSN 129 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~----------~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~~ 129 (608)
+.+-.+++++.. +.|+++++||... .+.++.+.+.+ ..-..+||..|+++....+++.+..++.
T Consensus 72 l~~ttd~~ea~~---~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 72 LSFTTDLAEGVK---DADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp EEEESCHHHHHT---TCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred EEEECCHHHHHh---cCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 556677877655 4799999988753 25666666552 2234577777888776666776666664
No 231
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=59.82 E-value=7.9 Score=37.63 Aligned_cols=79 Identities=13% Similarity=0.021 Sum_probs=44.4
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCC-----c--------cccccCceeecccccCCHHH
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEG-----F--------QKLFFGQEEIAIPVHSTVEA 71 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~-----~--------~~~~~g~ev~G~~~y~sv~~ 71 (608)
+..++|+||| |..|. +.++|.+.||. |...+ ..... . ...+. +-.|...+.+..|
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~-------V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e 86 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHE-------VTIGT-RDPKATLARAEPDAMGAPPFSQWL--PEHPHVHLAAFAD 86 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE-------EEEEE-SCHHHHHTCC-------CCHHHHG--GGSTTCEEEEHHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCE-------EEEEe-CChhhhhhhhhhhhhcchhhhHHH--hhcCceeccCHHH
Confidence 4567899995 22233 88888888764 44455 32110 0 00000 0123445678888
Q ss_pred HhhcCCCccEEEEeccChhcHHHHHHHh
Q 007327 72 ACAAHPMADVFINFSSFRSAAASSMAAL 99 (608)
Q Consensus 72 i~~~~p~vDlavi~vp~~~~~~~~le~~ 99 (608)
+.. +.|++|++||+.. ...+++++
T Consensus 87 ~~~---~aDvVilavp~~~-~~~~~~~i 110 (245)
T 3dtt_A 87 VAA---GAELVVNATEGAS-SIAALTAA 110 (245)
T ss_dssp HHH---HCSEEEECSCGGG-HHHHHHHH
T ss_pred HHh---cCCEEEEccCcHH-HHHHHHHh
Confidence 765 3699999999986 44555544
No 232
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.69 E-value=22 Score=33.15 Aligned_cols=35 Identities=11% Similarity=0.067 Sum_probs=19.4
Q ss_pred CccEEEEeccChh-----------cHHHHHHHhcCCCCCEEEEecC
Q 007327 78 MADVFINFSSFRS-----------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 78 ~vDlavi~vp~~~-----------~~~~~le~~~~~gv~~~viis~ 112 (608)
++|.+|.+..... ....++++|.+.|++.+|.+|+
T Consensus 67 ~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 67 GADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp TCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 3677776554321 1234566666666666666655
No 233
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=59.64 E-value=6.7 Score=43.08 Aligned_cols=110 Identities=16% Similarity=0.083 Sum_probs=61.9
Q ss_pred CCCCCcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 6 LFSKTTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 6 l~~p~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
-+.-+++.||| | +++.+.+.+..+|+. |.+++ |.... .. ..-.|+... +++++.. +.|+++
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~~-------V~~~d-~~~~~--~~---a~~~g~~~~-~l~e~~~---~aDvV~ 201 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGAY-------VVAYD-PYVSP--AR---AAQLGIELL-SLDDLLA---RADFIS 201 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCE-------EEEEC-TTSCH--HH---HHHHTCEEC-CHHHHHH---HCSEEE
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCCE-------EEEEC-CCCCh--hH---HHhcCcEEc-CHHHHHh---cCCEEE
Confidence 35667899995 3 333378888888643 55666 53321 00 012344444 7888766 379999
Q ss_pred EeccChhcHHHHHHH--hcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 84 NFSSFRSAAASSMAA--LKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 84 i~vp~~~~~~~~le~--~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+++|.......++.+ ....+-..+++-++--...++++|.+..++..+.
T Consensus 202 l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ 252 (529)
T 1ygy_A 202 VHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVR 252 (529)
T ss_dssp ECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEE
T ss_pred ECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCcc
Confidence 999986323333322 2222223444434322223677788877776544
No 234
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=59.12 E-value=12 Score=40.59 Aligned_cols=63 Identities=17% Similarity=0.099 Sum_probs=39.0
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccCh---------hcHHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHHHHHHh
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFR---------SAAASSMAALKQ-PTIRVVAIIAEGVPEADTKQLIAYARS 128 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~---------~~~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~~~a~~ 128 (608)
+.+..++++... +.|+++++||.. ..+.++++.+.. ..-..+||..++++....+++.+...+
T Consensus 72 l~~ttd~~~a~~---~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 72 LRFSTDIEAAVA---HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEEECCHHHHHH---HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEECCHHHHhh---cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 455567765544 379999999983 346777776553 233466777778765444445555444
No 235
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=58.40 E-value=4.8 Score=42.13 Aligned_cols=35 Identities=9% Similarity=-0.014 Sum_probs=25.3
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.|+|... .....+.+.++|++ +|.+|+-|
T Consensus 79 ~vDvvf~a~p~~~-s~~~a~~~~~~G~~-vIDlSa~~ 113 (359)
T 4dpk_A 79 DVDIIFSPLPQGA-AGPVEEQFAKEGFP-VISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTT-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCCc
Confidence 5899999999875 44555666668886 55667655
No 236
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=58.40 E-value=4.8 Score=42.13 Aligned_cols=35 Identities=9% Similarity=-0.014 Sum_probs=25.3
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.|+|... .....+.+.++|++ +|.+|+-|
T Consensus 79 ~vDvvf~a~p~~~-s~~~a~~~~~~G~~-vIDlSa~~ 113 (359)
T 4dpl_A 79 DVDIIFSPLPQGA-AGPVEEQFAKEGFP-VISNSPDH 113 (359)
T ss_dssp TCCEEEECCCTTT-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCCc
Confidence 5899999999875 44555666668886 55667655
No 237
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=58.30 E-value=49 Score=27.56 Aligned_cols=115 Identities=9% Similarity=0.105 Sum_probs=76.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
.-+|-+|...-.....+...+.+.|+-+ +.. .+..+.++.+.+.+...+|++-++....++-++++.+|+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~ 76 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGIDA---VGA-------DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRA 76 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCE---EEE-------SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCceE---EEe-------CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHh
Confidence 4579999999888888888887765432 222 234577888887766777777766455678999999998
Q ss_pred C-CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 247 G-KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 247 a-~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
. ....|||++-...+. ..... +.++|+. ..-+.++|...++.+..
T Consensus 77 ~~~~~~~ii~~s~~~~~-----------------------~~~~~-~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (136)
T 3hdv_A 77 SERAALSIIVVSGDTDV-----------------------EEAVD-VMHLGVVDFLLKPVDLGKLLELVNKELK 126 (136)
T ss_dssp STTTTCEEEEEESSCCH-----------------------HHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCCCCEEEEeCCCCh-----------------------HHHHH-HHhCCcceEEeCCCCHHHHHHHHHHHhc
Confidence 6 466788877321111 22222 3456753 34588888888876664
No 238
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=58.00 E-value=10 Score=37.73 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=62.2
Q ss_pred HHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE---------------EcCCcccccccCcccccccCCcccc
Q 007327 94 SSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDN 158 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv---------------lGPNc~Gi~~~~~~~l~~~~~~~~~ 158 (608)
.+.|+.. .|..++.+|.+-..+...++|.++|++.||-+ +|+..+||-|-+- .++......
T Consensus 118 QI~eAr~-~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~iIGINNRnL---~tf~vdl~~ 193 (258)
T 4a29_A 118 QIDDAYN-LGADTVLLIVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGARFIGIMSRDF---ETGEINKEN 193 (258)
T ss_dssp HHHHHHH-HTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCSEEEECSBCT---TTCCBCHHH
T ss_pred HHHHHHH-cCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCcEEEEeCCCc---cccccCHHH
Confidence 3555444 79999999999898888888999999988853 4888889865432 110111111
Q ss_pred cccccCCCCCcEEEEecChhHHHHHHHHHHhcCC
Q 007327 159 IIHCKLYRPGSVGFVSKSGGMSNELYNTIARVTD 192 (608)
Q Consensus 159 ~~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~ 192 (608)
...-...-|.++-+||-||--..+=+..+.+.|+
T Consensus 194 t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~ 227 (258)
T 4a29_A 194 QRKLISMIPSNVVKVAKLGISERNEIEELRKLGV 227 (258)
T ss_dssp HHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTC
T ss_pred HHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCC
Confidence 1101123466788999999877776666665543
No 239
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=57.50 E-value=6.2 Score=39.19 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=25.6
Q ss_pred CccEEEEeccChhcHHHHHHHhcCC-C-CCEEEEecCCCCH
Q 007327 78 MADVFINFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVPE 116 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~-g-v~~~viis~Gf~e 116 (608)
+.|+++++||+.. +.++++.+... + -+.+|.++.|+..
T Consensus 74 ~~d~vi~~v~~~~-~~~v~~~l~~~l~~~~~iv~~~~g~~~ 113 (316)
T 2ew2_A 74 QVDLIIALTKAQQ-LDAMFKAIQPMITEKTYVLCLLNGLGH 113 (316)
T ss_dssp CCSEEEECSCHHH-HHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred CCCEEEEEecccc-HHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence 4799999999875 77788877531 1 1234555678863
No 240
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=57.02 E-value=7.2 Score=39.21 Aligned_cols=118 Identities=10% Similarity=0.104 Sum_probs=64.0
Q ss_pred CCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccc--cCCHHHHhhcCCCccE
Q 007327 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPV--HSTVEAACAAHPMADV 81 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~--y~sv~~i~~~~p~vDl 81 (608)
-+..+++.|+| |..|+ +.+.+..+|+ .|..++ +... +...+ .+ .|..+ +.++.++.. +.|+
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-------~V~~~d-~~~~-~~~~~--~~-~g~~~~~~~~l~~~l~---~aDv 218 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-------NVKVGA-RSSA-HLARI--TE-MGLVPFHTDELKEHVK---DIDI 218 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-------EEEEEE-SSHH-HHHHH--HH-TTCEEEEGGGHHHHST---TCSE
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-------EEEEEE-CCHH-HHHHH--HH-CCCeEEchhhHHHHhh---CCCE
Confidence 46778889885 22233 7788887764 255666 4221 00000 00 13332 457777654 4799
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEec-CCCCHHHHHHHHHHHHhCCCeEE-cCCcccccccC
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIA-EGVPEADTKQLIAYARSNNKVVI-GPATVGGIQAG 145 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis-~Gf~e~~~~~l~~~a~~~g~rvl-GPNc~Gi~~~~ 145 (608)
+++++|....-...++.+. .| .++|-+ .|-.+.. + +.+++.|++++ =||..|.+.+.
T Consensus 219 Vi~~~p~~~i~~~~~~~mk-~g--~~lin~a~g~~~~~---~-~~a~~~G~~~i~~pg~~g~v~~a 277 (300)
T 2rir_A 219 CINTIPSMILNQTVLSSMT-PK--TLILDLASRPGGTD---F-KYAEKQGIKALLAPGLPGIVAPK 277 (300)
T ss_dssp EEECCSSCCBCHHHHTTSC-TT--CEEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHHCHH
T ss_pred EEECCChhhhCHHHHHhCC-CC--CEEEEEeCCCCCcC---H-HHHHHCCCEEEECCCCCCcHHHH
Confidence 9999998643233444333 22 344433 3322221 3 56677888865 57777766444
No 241
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=56.98 E-value=64 Score=26.98 Aligned_cols=120 Identities=9% Similarity=0.004 Sum_probs=77.6
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
.+-+|-+|...-.....+...+.+.|+ . +... -+..+.++++.+.+ ..+|++-++....++.++++.+|
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~~-~dlii~d~~l~~~~g~~~~~~l~ 74 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAVKTILSDAGF--H-IISA-------DSGGQCIDLLKKGF-SGVVLLDIMMPGMDGWDTIRAIL 74 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHTCC-CEEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCe--E-EEEe-------CCHHHHHHHHHhcC-CCEEEEeCCCCCCCHHHHHHHHH
Confidence 355789999998888888888877654 2 2222 23568888887654 67777777644457889999999
Q ss_pred h--CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHHHHh
Q 007327 246 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKLVE 319 (608)
Q Consensus 246 ~--a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~~~ 319 (608)
+ .....|||++-....... .. . + .++|+ ...-+.++|...++.++.....
T Consensus 75 ~~~~~~~~pii~~s~~~~~~~--~~-~--------------------~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~~~~ 130 (142)
T 3cg4_A 75 DNSLEQGIAIVMLTAKNAPDA--KM-I--------------------G-LQEYVVDYITKPFDNEDLIEKTTFFMGFVRN 130 (142)
T ss_dssp HTTCCTTEEEEEEECTTCCCC--SS-T--------------------T-GGGGEEEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCEEEEECCCCHHH--HH-H--------------------H-HhcCccEEEeCCCCHHHHHHHHHHHHHHHhh
Confidence 8 446678888743332221 00 0 0 12232 2345788898888888876655
Q ss_pred c
Q 007327 320 E 320 (608)
Q Consensus 320 ~ 320 (608)
.
T Consensus 131 ~ 131 (142)
T 3cg4_A 131 Q 131 (142)
T ss_dssp C
T ss_pred c
Confidence 4
No 242
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=56.82 E-value=2.1 Score=44.25 Aligned_cols=92 Identities=15% Similarity=0.014 Sum_probs=50.1
Q ss_pred cEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc----------cCcee-ecccccCCHHHHhhcCC
Q 007327 11 TQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF----------FGQEE-IAIPVHSTVEAACAAHP 77 (608)
Q Consensus 11 s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~----------~g~ev-~G~~~y~sv~~i~~~~p 77 (608)
+|+||| |..|. +..+|.+.|+. |..++ .... ....+ .|.++ .++.+..+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~-------V~~~~-r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 84 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCRE-------VCVWH-MNEE-EVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN--- 84 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEE-------EEEEC-SCHH-HHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT---
T ss_pred eEEEECCCHHHHHHHHHHHhCCCE-------EEEEE-CCHH-HHHHHHHcCcccccccccccccceeeeCCHHHHHc---
Confidence 688885 22233 77788877653 44555 3211 00000 01111 13556677877654
Q ss_pred CccEEEEeccChhcHHHHHHH----hcC---C-CCCEEEEecCCCCH
Q 007327 78 MADVFINFSSFRSAAASSMAA----LKQ---P-TIRVVAIIAEGVPE 116 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~----~~~---~-gv~~~viis~Gf~e 116 (608)
+.|++|++||+.. +.++++. +.. . + ..+|.++.|+..
T Consensus 85 ~aDvVilav~~~~-~~~v~~~~~~gl~~~l~~~~-~ivv~~~~gi~~ 129 (366)
T 1evy_A 85 GAEIILFVIPTQF-LRGFFEKSGGNLIAYAKEKQ-VPVLVCTKGIER 129 (366)
T ss_dssp TCSSEEECCCHHH-HHHHHHHHCHHHHHHHHHHT-CCEEECCCSCCT
T ss_pred CCCEEEECCChHH-HHHHHHHhHHHHHHhcCccC-CEEEEECCcCCC
Confidence 4799999999854 6777666 431 1 2 234445557754
No 243
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=56.72 E-value=12 Score=36.72 Aligned_cols=50 Identities=18% Similarity=0.259 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCccccc
Q 007327 92 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 142 (608)
Q Consensus 92 ~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~ 142 (608)
.+++.+++.+.|+|.+-++|. +.....+.+++..+++|+.++.|.|+|+.
T Consensus 105 ~~A~~~al~~~g~~rvglltp-y~~~~~~~~~~~l~~~Giev~~~~~~~~~ 154 (240)
T 3ixl_A 105 STAVLNGLRALGVRRVALATA-YIDDVNERLAAFLAEESLVPTGCRSLGIT 154 (240)
T ss_dssp HHHHHHHHHHTTCSEEEEEES-SCHHHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHhCCCEEEEEeC-ChHHHHHHHHHHHHHCCCEEeccccCCCC
Confidence 456677777789999988887 77667788888888999999999998864
No 244
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=56.42 E-value=44 Score=27.78 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=72.4
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|-.+-.....+...+.+.| +..+.... +..+.++.+...+...+|++-++....+|-++++.+|+..
T Consensus 7 ~iLivdd~~~~~~~l~~~L~~~g--~~~v~~~~-------~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~ 77 (129)
T 3h1g_A 7 KLLVVDDSSTMRRIIKNTLSRLG--YEDVLEAE-------HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDS 77 (129)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTT--CCCEEEES-------SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTST
T ss_pred EEEEEeCCHHHHHHHHHHHHHcC--CcEEEEeC-------CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 68888888888887777777654 43333332 3457778777665566777766644567899999999853
Q ss_pred --CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 249 --VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 249 --~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
...|||++-+ ... . .....+ .++|+ ...-+.++|...++.++.
T Consensus 78 ~~~~~pii~~s~-~~~------------------~----~~~~~~-~~~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 78 RFKEIPIIMITA-EGG------------------K----AEVITA-LKAGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TCTTCCEEEEES-CCS------------------H----HHHHHH-HHHTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCCCeEEEEeC-CCC------------------h----HHHHHH-HHcCccEEEeCCCCHHHHHHHHHHHhc
Confidence 4678888731 111 1 222222 35564 345678888888776653
No 245
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=55.19 E-value=79 Score=29.16 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=26.0
Q ss_pred CccEEEEeccChh---------cHHHHHHHhcCCCCCEEEEecC
Q 007327 78 MADVFINFSSFRS---------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 78 ~vDlavi~vp~~~---------~~~~~le~~~~~gv~~~viis~ 112 (608)
++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 63 ~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 63 GMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp TCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 5899887765431 1456888888889998888886
No 246
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=54.89 E-value=65 Score=26.51 Aligned_cols=81 Identities=10% Similarity=0.074 Sum_probs=54.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
.+-+|-+|.........+...+.+.|.-+ +.. .+..+.++.+.+.+ ..+|++-++....++-++++.+|
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~ 74 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSLLDSWFSSLGATT---VLA-------ADGVDALELLGGFT-PDLMICDIAMPRMNGLKLLEHIR 74 (130)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------SCHHHHHHHHTTCC-CSEEEECCC-----CHHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCceE---EEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHH
Confidence 45579999999988888888888775432 221 24567888886543 56777766534456789999999
Q ss_pred hCCCCCCEEEEE
Q 007327 246 QGKVNKPVVAWV 257 (608)
Q Consensus 246 ~a~~~KPVvvlk 257 (608)
+.....|||++-
T Consensus 75 ~~~~~~~ii~~t 86 (130)
T 3eod_A 75 NRGDQTPVLVIS 86 (130)
T ss_dssp HTTCCCCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 866778998883
No 247
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=54.70 E-value=51 Score=26.13 Aligned_cols=78 Identities=9% Similarity=0.099 Sum_probs=53.2
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|..+-.....+...+.+.|+- +.... +..+.++++.+. ...+|++-.+....++.++++.+++..
T Consensus 3 ~iliv~~~~~~~~~l~~~l~~~g~~---v~~~~-------~~~~~~~~l~~~-~~dlii~d~~~~~~~~~~~~~~l~~~~ 71 (119)
T 2j48_A 3 HILLLEEEDEAATVVCEMLTAAGFK---VIWLV-------DGSTALDQLDLL-QPIVILMAWPPPDQSCLLLLQHLREHQ 71 (119)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTCE---EEEES-------CHHHHHHHHHHH-CCSEEEEECSTTCCTHHHHHHHHHHTC
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCcE---EEEec-------CHHHHHHHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhcc
Confidence 5778888887777777777765542 22222 345777777664 356777776634457889999998864
Q ss_pred --CCCCEEEEE
Q 007327 249 --VNKPVVAWV 257 (608)
Q Consensus 249 --~~KPVvvlk 257 (608)
...|||++-
T Consensus 72 ~~~~~~ii~~~ 82 (119)
T 2j48_A 72 ADPHPPLVLFL 82 (119)
T ss_dssp CCSSCCCEEEE
T ss_pred ccCCCCEEEEe
Confidence 577888873
No 248
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=54.46 E-value=18 Score=37.29 Aligned_cols=51 Identities=22% Similarity=0.263 Sum_probs=33.4
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCC---CCC---EEEEecCCCCH
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQP---TIR---VVAIIAEGVPE 116 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~---gv~---~~viis~Gf~e 116 (608)
++.+..+++++.. +.|++|++||+. .+.++++.+... .++ .+|.++.|+..
T Consensus 90 ~i~~~~~~~ea~~---~aDvVilav~~~-~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~ 146 (375)
T 1yj8_A 90 NIVAHSDLASVIN---DADLLIFIVPCQ-YLESVLASIKESESIKIASHAKAISLTKGFIV 146 (375)
T ss_dssp TEEEESSTHHHHT---TCSEEEECCCHH-HHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred CeEEECCHHHHHc---CCCEEEEcCCHH-HHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence 4566677777554 479999999986 478888877630 222 34444557753
No 249
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=54.31 E-value=52 Score=28.14 Aligned_cols=114 Identities=11% Similarity=0.093 Sum_probs=73.7
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|..+-.....+...+.+.+ ++..+.... +..+.++++.+.+ ..+|++-+...-.++.++++.+|+..
T Consensus 22 ~iLivdd~~~~~~~l~~~L~~~~-~~~~v~~~~-------~~~~al~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~~ 92 (150)
T 4e7p_A 22 KVLVAEDQSMLRDAMCQLLTLQP-DVESVLQAK-------NGQEAIQLLEKES-VDIAILDVEMPVKTGLEVLEWIRSEK 92 (150)
T ss_dssp EEEEECSCHHHHHHHHHHHHTST-TEEEEEEES-------SHHHHHHHHTTSC-CSEEEECSSCSSSCHHHHHHHHHHTT
T ss_pred EEEEEcCCHHHHHHHHHHHHhCC-CcEEEEEEC-------CHHHHHHHhhccC-CCEEEEeCCCCCCcHHHHHHHHHHhC
Confidence 68999999888888877777654 223333332 3457788876543 56777766644567899999999866
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
...|||++-...+. ..... +.++|+. ...+.++|...++.++.
T Consensus 93 ~~~~ii~ls~~~~~-----------------------~~~~~-~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 93 LETKVVVVTTFKRA-----------------------GYFER-AVKAGVDAYVLKERSIADLMQTLHTVLE 139 (150)
T ss_dssp CSCEEEEEESCCCH-----------------------HHHHH-HHHTTCSEEEETTSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCCH-----------------------HHHHH-HHHCCCcEEEecCCCHHHHHHHHHHHHc
Confidence 67888887321111 22222 3456653 24478888888876664
No 250
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=54.29 E-value=1e+02 Score=30.64 Aligned_cols=112 Identities=13% Similarity=0.146 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC------hhHHHHHHHH
Q 007327 113 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS------GGMSNELYNT 186 (608)
Q Consensus 113 Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS------G~l~~~~~~~ 186 (608)
+++|...+++.+.+++.|-+ ||... . .+ ..-+...||++..+ ..+...+-+.
T Consensus 36 ~vs~~tr~rV~~~~~~lgY~---pn~~a-----~-~l-------------~~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~ 93 (344)
T 3kjx_A 36 DVSDATRARVLAAAKELGYV---PNKIA-----G-AL-------------ASNRVNLVAVIIPSLSNMVFPEVLTGINQV 93 (344)
T ss_dssp CCCHHHHHHHHHHHHHHTCC---CCCCC-----S-CS-------------TTSCCSEEEEEESCSSSSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCC---CCHHH-----H-Hh-------------hcCCCCEEEEEeCCCCcHHHHHHHHHHHHH
Confidence 68898999999999997754 44321 0 11 00134456766532 2233344445
Q ss_pred HHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 187 IARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 187 ~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
+.+.| +...+...+.. .-...++++.+.+ ..+..|++. +.......++.+++ .+.|||++
T Consensus 94 a~~~g--~~~~~~~~~~~--~~~~~~~i~~l~~-~~vdGiIi~---~~~~~~~~~~~l~~--~~iPvV~i 153 (344)
T 3kjx_A 94 LEDTE--LQPVVGVTDYL--PEKEEKVLYEMLS-WRPSGVIIA---GLEHSEAARAMLDA--AGIPVVEI 153 (344)
T ss_dssp HTSSS--SEEEEEECTTC--HHHHHHHHHHHHT-TCCSEEEEE---CSCCCHHHHHHHHH--CSSCEEEE
T ss_pred HHHCC--CEEEEEeCCCC--HHHHHHHHHHHHh-CCCCEEEEE---CCCCCHHHHHHHHh--CCCCEEEE
Confidence 55554 44444433322 2234566666654 567888876 33333355555554 58999998
No 251
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=54.24 E-value=88 Score=28.87 Aligned_cols=43 Identities=26% Similarity=0.162 Sum_probs=29.3
Q ss_pred CCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. ++|.+|.+..... ....+++.|.+.|++.+|.+|+
T Consensus 65 ~~~~~~~~---~~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 65 GXLEQAVT---NAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHHHHHT---TCSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHc---CCCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 44555544 4899887765411 1456788888889998888875
No 252
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=54.14 E-value=15 Score=37.18 Aligned_cols=99 Identities=17% Similarity=0.096 Sum_probs=52.2
Q ss_pred CCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCC------Cccccc-cCceeecccccCCHHHHhhcC
Q 007327 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAE------GFQKLF-FGQEEIAIPVHSTVEAACAAH 76 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~------~~~~~~-~g~ev~G~~~y~sv~~i~~~~ 76 (608)
-|++++|+|+| |.-|. +...|.+.|+. |..+..+... |-.... .+.....+++..+.+++ .
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~G~~-------V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-- 85 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARAGHE-------VILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAV-Q-- 85 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHTTCE-------EEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGG-T--
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHCCCe-------EEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHc-C--
Confidence 47888999996 23233 66667776643 3222212110 000000 01112344556666553 2
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCC-CC-CEEEEecCCCCH
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQP-TI-RVVAIIAEGVPE 116 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~-gv-~~~viis~Gf~e 116 (608)
+.|++|++||+.. +.++++.+... +- ..+|.++.|+..
T Consensus 86 -~~D~vilavk~~~-~~~~l~~l~~~l~~~~~iv~~~nGi~~ 125 (318)
T 3hwr_A 86 -GADLVLFCVKSTD-TQSAALAMKPALAKSALVLSLQNGVEN 125 (318)
T ss_dssp -TCSEEEECCCGGG-HHHHHHHHTTTSCTTCEEEEECSSSSH
T ss_pred -CCCEEEEEccccc-HHHHHHHHHHhcCCCCEEEEeCCCCCc
Confidence 4899999999985 78888887632 11 245667889975
No 253
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=54.02 E-value=66 Score=26.98 Aligned_cols=114 Identities=8% Similarity=0.131 Sum_probs=74.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhc-CCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN-IPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~-Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
+|-+|...-.....+...+.+.|.-+ +. -.+..+.++.+.+ .....+|++-++..-.++-+|++.+|+.
T Consensus 5 ~ilivdd~~~~~~~l~~~l~~~g~~v---~~-------~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~ 74 (143)
T 3jte_A 5 KILVIDDESTILQNIKFLLEIDGNEV---LT-------ASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKI 74 (143)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEE---EE-------ESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCceE---EE-------eCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHh
Confidence 57888888887777777777665422 11 2345678888875 3556777777764456789999999986
Q ss_pred CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHH
Q 007327 248 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 316 (608)
Q Consensus 248 ~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 316 (608)
....|||++-..... ..... +.++|+. ..-+.++|...++.++.+
T Consensus 75 ~~~~~ii~ls~~~~~-----------------------~~~~~-~~~~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 75 TPHMAVIILTGHGDL-----------------------DNAIL-AMKEGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp CTTCEEEEEECTTCH-----------------------HHHHH-HHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCCH-----------------------HHHHH-HHHhCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 667888887321111 22222 3456643 345888998888877653
No 254
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=53.87 E-value=12 Score=37.59 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=65.0
Q ss_pred CCCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccc--cCCHHHHhhcCCCccE
Q 007327 6 LFSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPV--HSTVEAACAAHPMADV 81 (608)
Q Consensus 6 l~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~--y~sv~~i~~~~p~vDl 81 (608)
-+..+++.|+| |..|+ +.+.+..+|+ .|..++ +.... .... .-.|... +.+++++.. +.|+
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-------~V~~~d-r~~~~-~~~~---~~~g~~~~~~~~l~~~l~---~aDv 216 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-------KVKVGA-RESDL-LARI---AEMGMEPFHISKAAQELR---DVDV 216 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-------EEEEEE-SSHHH-HHHH---HHTTSEEEEGGGHHHHTT---TCSE
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-------EEEEEE-CCHHH-HHHH---HHCCCeecChhhHHHHhc---CCCE
Confidence 35677888885 22233 7778877764 355666 42210 0000 0013332 356777654 4799
Q ss_pred EEEeccChhcHHHHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCeEE-cCCcccccccC
Q 007327 82 FINFSSFRSAAASSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVVI-GPATVGGIQAG 145 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~rvl-GPNc~Gi~~~~ 145 (608)
+++++|....-...++.+. .| .++|-++ |-.+.. + +.+++.|++++ =||..|.+.|.
T Consensus 217 Vi~~~p~~~i~~~~l~~mk-~~--~~lin~ar~~~~~~---~-~~a~~~Gv~~~~~~~l~~~v~p~ 275 (293)
T 3d4o_A 217 CINTIPALVVTANVLAEMP-SH--TFVIDLASKPGGTD---F-RYAEKRGIKALLVPGLPGIVAPK 275 (293)
T ss_dssp EEECCSSCCBCHHHHHHSC-TT--CEEEECSSTTCSBC---H-HHHHHHTCEEEECCCHHHHHCHH
T ss_pred EEECCChHHhCHHHHHhcC-CC--CEEEEecCCCCCCC---H-HHHHHCCCEEEECCCCCcccCHH
Confidence 9999998643345556554 33 3444343 322222 2 56677888876 46666666554
No 255
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=53.41 E-value=14 Score=38.00 Aligned_cols=45 Identities=24% Similarity=0.317 Sum_probs=28.8
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCC
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG 113 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~G 113 (608)
+++..+..++.. ++|+++.|+|... .....+.+.++|.+ +| .+++
T Consensus 66 l~v~~~~~~~~~---~vDvV~~atp~~~-~~~~a~~~l~aG~~-VI-d~sp 110 (337)
T 1cf2_P 66 IEVAGTVDDMLD---EADIVIDCTPEGI-GAKNLKMYKEKGIK-AI-FQGG 110 (337)
T ss_dssp CCCCEEHHHHHH---TCSEEEECCSTTH-HHHHHHHHHHHTCC-EE-ECTT
T ss_pred eEEcCCHHHHhc---CCCEEEECCCchh-hHHHHHHHHHcCCE-EE-EecC
Confidence 333345666554 4899999999875 44555666668876 44 4444
No 256
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=53.33 E-value=24 Score=34.47 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=45.3
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCcc---HHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRD---EYSLVE 242 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~---~~~f~~ 242 (608)
..++|++|.-+|.+...+.+. +.+.|+.+.+ ++.|+|+||+.-...+ ..+..+
T Consensus 6 ~~~~V~vI~i~g~I~~~~~~~-----------------------l~~~l~~a~~-~~~~~Ivl~inspGG~v~~~~~i~~ 61 (230)
T 3viv_A 6 AKNIVYVAQIKGQITSYTYDQ-----------------------FDRYITIAEQ-DNAEAIIIELDTPGGRADAMMNIVQ 61 (230)
T ss_dssp CCCEEEEEEEESCBCHHHHHH-----------------------HHHHHHHHHH-TTCSEEEEEEEBSCEEHHHHHHHHH
T ss_pred CCCeEEEEEEeCEECHHHHHH-----------------------HHHHHHHHhc-CCCCEEEEEEeCCCcCHHHHHHHHH
Confidence 467899999998887665443 3456666665 4699999999822233 344555
Q ss_pred HHHhCCCCCCEEEEE
Q 007327 243 ALKQGKVNKPVVAWV 257 (608)
Q Consensus 243 ~~r~a~~~KPVvvlk 257 (608)
.+++ ..||||++.
T Consensus 62 ~i~~--~~~PVia~v 74 (230)
T 3viv_A 62 RIQQ--SKIPVIIYV 74 (230)
T ss_dssp HHHT--CSSCEEEEE
T ss_pred HHHh--CCCCEEEEE
Confidence 5554 689999998
No 257
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.21 E-value=31 Score=34.47 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=43.6
Q ss_pred cccCCHHHHhhcCCCccEEEEec-cC--hhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe---EEcCC
Q 007327 64 PVHSTVEAACAAHPMADVFINFS-SF--RSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV---VIGPA 137 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~v-p~--~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r---vlGPN 137 (608)
.++.-+.++-+..+++-+++..- -+ ..-++...++|.+.|+..+++.- .+....+++++.++++|+. ++-|+
T Consensus 83 ~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipD--lp~ee~~~~~~~~~~~gl~~I~lvap~ 160 (271)
T 3nav_A 83 ICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIAD--VPTNESQPFVAAAEKFGIQPIFIAPPT 160 (271)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETT--SCGGGCHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECC--CCHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 45666666543312344443311 11 11246778899999999988843 4433467899999999975 45444
No 258
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=52.72 E-value=67 Score=27.53 Aligned_cols=78 Identities=9% Similarity=0.085 Sum_probs=55.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|..+......+...+.+.|+- +... .+..+.++++.+.+ ..+|++-++....++.++++.+++.
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~---v~~~-------~~~~~a~~~l~~~~-~dliild~~l~~~~g~~~~~~l~~~ 72 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFT---VSSF-------ASATEALAGLSADF-AGIVISDIRMPGMDGLALFRKILAL 72 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE---EEEE-------SCHHHHHHTCCTTC-CSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcE---EEEE-------CCHHHHHHHHHhCC-CCEEEEeCCCCCCCHHHHHHHHHhh
Confidence 46888888888888887777765542 2222 23567788876643 5777777764456788999999886
Q ss_pred CCCCCEEEE
Q 007327 248 KVNKPVVAW 256 (608)
Q Consensus 248 ~~~KPVvvl 256 (608)
....|||++
T Consensus 73 ~~~~pii~l 81 (155)
T 1qkk_A 73 DPDLPMILV 81 (155)
T ss_dssp CTTSCEEEE
T ss_pred CCCCCEEEE
Confidence 667899988
No 259
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=52.67 E-value=19 Score=37.13 Aligned_cols=36 Identities=8% Similarity=-0.013 Sum_probs=26.2
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++|+++.|+|... .....+.+.++|++ +|-.|+-|.
T Consensus 75 ~~Dvvf~a~p~~~-s~~~~~~~~~~g~~-vIDlSa~fR 110 (337)
T 3dr3_A 75 GVDVVFLATAHEV-SHDLAPQFLEAGCV-VFDLSGAFR 110 (337)
T ss_dssp TCSEEEECSCHHH-HHHHHHHHHHTTCE-EEECSSTTS
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEEcCCccc
Confidence 5899999999865 45566666668886 666677663
No 260
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=52.65 E-value=44 Score=27.92 Aligned_cols=113 Identities=12% Similarity=0.114 Sum_probs=71.7
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-----CccHHHHHH
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-----GRDEYSLVE 242 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g-----~~~~~~f~~ 242 (608)
-+|-+|.........+...+.+.|+ . +... -+..+.++++.+.+ ..+|++-++.. ..++.++++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~~-~dlvi~d~~~~~~~~~~~~g~~~~~ 72 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFS--K-VITL-------SSPVSLSTVLREEN-PEVVLLDMNFTSGINNGNEGLFWLH 72 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSS--E-EEEE-------CCHHHHHHHHHHSC-EEEEEEETTTTC-----CCHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCc--E-EEEe-------CCHHHHHHHHHcCC-CCEEEEeCCcCCCCCCCccHHHHHH
Confidence 3688888888888878777776544 2 2222 24567888887754 66777766533 447889999
Q ss_pred HHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 243 ALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 243 ~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
.+++.....|||++-.-... .....+ .++|+. ..-+.++|...++.+..
T Consensus 73 ~l~~~~~~~~ii~ls~~~~~-----------------------~~~~~~-~~~g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 73 EIKRQYRDLPVVLFTAYADI-----------------------DLAVRG-IKEGASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp HHHHHCTTCCEEEEEEGGGH-----------------------HHHHHH-HHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred HHHhhCcCCCEEEEECCCCH-----------------------HHHHHH-HHcCchheeeCCCCHHHHHHHHHHHHH
Confidence 99886677899988321110 222233 356652 34578888888776654
No 261
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=52.39 E-value=21 Score=36.68 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=42.4
Q ss_pred ccC---CHHHHhhcCCCccEEEEeccCh----hcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 65 VHS---TVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 65 ~y~---sv~~i~~~~p~vDlavi~vp~~----~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
.|. +.+++. . +++|++|+++|.. ...+-+.+++. +|.. +|+-.-..--..-++|.+.|+++|.++.
T Consensus 72 ~~~~~~d~~~ll-~-~~iDvVv~~t~~~~~~~~~~~~~~~AL~-aGkh-VvtanK~pla~~~~eL~~~A~~~gv~~~ 144 (331)
T 3c8m_A 72 LEYESISASEAL-A-RDFDIVVDATPASADGKKELAFYKETFE-NGKD-VVTANKSGLANFWPEIMEYARSNNRRIR 144 (331)
T ss_dssp CCSEECCHHHHH-H-SSCSEEEECSCCCSSSHHHHHHHHHHHH-TTCE-EEECCCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred ccCCCCCHHHHh-C-CCCCEEEECCCCCCccchHHHHHHHHHH-CCCe-EEecCchhhHHHHHHHHHHHHHcCCEEE
Confidence 555 888887 4 3699999999984 32334555554 7754 4432111111245789999999998764
No 262
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=52.24 E-value=8.3 Score=39.36 Aligned_cols=94 Identities=12% Similarity=-0.006 Sum_probs=49.1
Q ss_pred CCCcEEEEE-cCCch-HHHHHhh-CcccCCCCCCcEEEEeCCCCCCccccccCceeeccc-ccCCHHHHhhc--CCCccE
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLD-FDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIP-VHSTVEAACAA--HPMADV 81 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~-~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~-~y~sv~~i~~~--~p~vDl 81 (608)
++.+++||| |.-|+ +++.+.+ .. +.++++.++ ......-..+ .+-.|.+ .+.+++++... .+++|+
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~-----~~elvav~d-~~~~~~~~~~--a~~~g~~~~~~~~e~ll~~~~~~~iDv 74 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAK-----YLEMGAMVG-IDAASDGLAR--AQRMGVTTTYAGVEGLIKLPEFADIDF 74 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCS-----SEEEEEEEC-SCTTCHHHHH--HHHTTCCEESSHHHHHHHSGGGGGEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCc-----CeEEEEEEe-CChhhhHHHH--HHHcCCCcccCCHHHHHhccCCCCCcE
Confidence 356789885 22222 6777655 32 334555555 3211000000 1234555 35677777543 125899
Q ss_pred EEEeccChhcHHHHHHHhcCC--CCCEEEEec
Q 007327 82 FINFSSFRSAAASSMAALKQP--TIRVVAIIA 111 (608)
Q Consensus 82 avi~vp~~~~~~~~le~~~~~--gv~~~viis 111 (608)
+++++|.......+.+++. + |.. +++.+
T Consensus 75 V~~atp~~~h~~~a~~al~-a~~Gk~-Vi~ek 104 (312)
T 1nvm_B 75 VFDATSASAHVQNEALLRQ-AKPGIR-LIDLT 104 (312)
T ss_dssp EEECSCHHHHHHHHHHHHH-HCTTCE-EEECS
T ss_pred EEECCChHHHHHHHHHHHH-hCCCCE-EEEcC
Confidence 9999997654444555444 5 654 55544
No 263
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=51.02 E-value=40 Score=34.04 Aligned_cols=110 Identities=6% Similarity=0.026 Sum_probs=60.1
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecC------------CCCCCCCCHHHHHHHhh-----cCCCccEEEEEEe
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIG------------GDVFPGSTLSDHILRFN-----NIPQVKMMVVLGE 231 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~G------------n~~~~dv~~~d~l~~l~-----~Dp~T~~I~ly~E 231 (608)
+||+|.-+|.++...+..+.+.+.-+..+++.- ... -.++.|+++++. +||+..+|.+..-
T Consensus 5 rvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 5 NFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEF--FTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp EEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEE--ESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcE--ECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 466666655555555555544444333333321 112 236777776643 4899999887654
Q ss_pred cCCccHHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCH
Q 007327 232 LGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSY 303 (608)
Q Consensus 232 ~g~~~~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~ 303 (608)
.-...+-..++++ .+|+|++=||-.... ..++...++.++.|+.....+
T Consensus 83 -~~~H~~~~~~al~---aGkhVl~EKPla~~~-------------------~ea~~l~~~a~~~g~~~~v~~ 131 (318)
T 3oa2_A 83 -NYLHYPHIAAGLR---LGCDVICEKPLVPTP-------------------EMLDQLAVIERETDKRLYNIL 131 (318)
T ss_dssp -GGGHHHHHHHHHH---TTCEEEECSSCCSCH-------------------HHHHHHHHHHHHHTCCEEECC
T ss_pred -cHHHHHHHHHHHH---CCCeEEEECCCcCCH-------------------HHHHHHHHHHHHhCCEEEEEE
Confidence 2222222233333 689999988644332 112455567788888654433
No 264
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=50.86 E-value=41 Score=27.91 Aligned_cols=79 Identities=10% Similarity=0.209 Sum_probs=51.4
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|..+......+...+.+.|.-+...++.+.++ ++.+.+. ...+|++-++....++.++++.+|+..
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a---------~~~~~~~-~~dlii~d~~l~~~~g~~~~~~l~~~~ 72 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSA---------VQRVETL-KPDIVIIDVDIPGVNGIQVLETLRKRQ 72 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTH---------HHHHHHH-CCSEEEEETTCSSSCHHHHHHHHHHTT
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHH---------HHHHHhc-CCCEEEEecCCCCCChHHHHHHHHhcC
Confidence 466777777777777777877663332234444443 3444332 346777776644567899999999866
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 73 ~~~~ii~~s 81 (134)
T 3f6c_A 73 YSGIIIIVS 81 (134)
T ss_dssp CCSEEEEEE
T ss_pred CCCeEEEEe
Confidence 677888774
No 265
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=50.84 E-value=1.2e+02 Score=25.90 Aligned_cols=117 Identities=11% Similarity=0.091 Sum_probs=77.4
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
..-+|-+|.........+...+.+.|+ . +... -+..+.++.+.+. ...+|++-++..-.++-+|++.+|
T Consensus 13 ~~~~ILivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~l~~~-~~dlvi~D~~l~~~~g~~~~~~l~ 81 (153)
T 3hv2_A 13 RRPEILLVDSQEVILQRLQQLLSPLPY--T-LHFA-------RDATQALQLLASR-EVDLVISAAHLPQMDGPTLLARIH 81 (153)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHTTSSC--E-EEEE-------SSHHHHHHHHHHS-CCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHhcccCc--E-EEEE-------CCHHHHHHHHHcC-CCCEEEEeCCCCcCcHHHHHHHHH
Confidence 456899999999988888888876653 2 2222 2456778877665 367787777655567899999999
Q ss_pred hCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcC-C----cccCCHHHHHHHHHHHHHHH
Q 007327 246 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-A----VVPTSYEAFESAIKETFEKL 317 (608)
Q Consensus 246 ~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-v----i~v~~~~el~~~~~~~~~~~ 317 (608)
+.....|||++-. ... . .....+ -++| + ...-+.++|...++.++...
T Consensus 82 ~~~~~~~ii~~s~-~~~------------------~----~~~~~~-~~~g~~~~~l~KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 82 QQYPSTTRILLTG-DPD------------------L----KLIAKA-INEGEIYRYLSKPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp HHCTTSEEEEECC-CCC------------------H----HHHHHH-HHTTCCSEEECSSCCHHHHHHHHHHHHHHH
T ss_pred hHCCCCeEEEEEC-CCC------------------H----HHHHHH-HhCCCcceEEeCCCCHHHHHHHHHHHHHHh
Confidence 8667788888721 111 1 222333 3455 3 34458889998888776543
No 266
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=50.59 E-value=45 Score=31.46 Aligned_cols=42 Identities=17% Similarity=0.168 Sum_probs=26.5
Q ss_pred CHHHHhhcCCCccEEEEeccChh---cHHHHHHHhcCCCCCEEEEecC
Q 007327 68 TVEAACAAHPMADVFINFSSFRS---AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~~---~~~~~le~~~~~gv~~~viis~ 112 (608)
++.++.. .+|.+|.+..... ....+++.|.+.|++.+|.+|+
T Consensus 81 ~~~~~~~---~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 81 ALKQAMQ---GQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HHHHHHT---TCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHhc---CCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 4444443 4788876665432 1345677777778888887776
No 267
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=49.98 E-value=83 Score=25.37 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=56.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CccHHHHHHHHHh
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALKQ 246 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g-~~~~~~f~~~~r~ 246 (608)
-+|-+|...-.....+...+.+.|+-+ .. -.+..+.++++.+.+ ..+|++-++.. ..++.++++.+|+
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~v---~~-------~~~~~~a~~~~~~~~-~dlvi~d~~~~~~~~g~~~~~~l~~ 74 (127)
T 2gkg_A 6 KKILIVESDTALSATLRSALEGRGFTV---DE-------TTDGKGSVEQIRRDR-PDLVVLAVDLSAGQNGYLICGKLKK 74 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHTCEE---EE-------ECCHHHHHHHHHHHC-CSEEEEESBCGGGCBHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCceE---EE-------ecCHHHHHHHHHhcC-CCEEEEeCCCCCCCCHHHHHHHHhc
Confidence 368888888888888887777755432 22 223457777776643 56777766633 4578899999998
Q ss_pred C--CCCCCEEEEEeCCC
Q 007327 247 G--KVNKPVVAWVSGTC 261 (608)
Q Consensus 247 a--~~~KPVvvlk~Grs 261 (608)
. ....|||++ ....
T Consensus 75 ~~~~~~~~ii~~-~~~~ 90 (127)
T 2gkg_A 75 DDDLKNVPIVII-GNPD 90 (127)
T ss_dssp STTTTTSCEEEE-ECGG
T ss_pred CccccCCCEEEE-ecCC
Confidence 6 467899999 4433
No 268
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=49.56 E-value=35 Score=27.94 Aligned_cols=47 Identities=19% Similarity=0.140 Sum_probs=31.7
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHh
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARS 128 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~ 128 (608)
++|++|.++|... ...+.+.|.+.|++.+. +++... ..+++.+++++
T Consensus 69 ~~d~vi~~~~~~~-~~~~~~~~~~~g~~~~~-~~~~~~--~~~~~~~~~~~ 115 (118)
T 3ic5_A 69 GFDAVISAAPFFL-TPIIAKAAKAAGAHYFD-LTEDVA--ATNAVRALVED 115 (118)
T ss_dssp TCSEEEECSCGGG-HHHHHHHHHHTTCEEEC-CCSCHH--HHHHHHHHHHC
T ss_pred CCCEEEECCCchh-hHHHHHHHHHhCCCEEE-ecCcHH--HHHHHHHHHHh
Confidence 4899999998765 67888889889998654 343222 33455555544
No 269
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=49.16 E-value=25 Score=36.45 Aligned_cols=35 Identities=6% Similarity=0.145 Sum_probs=25.7
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++|+++.|+|... .....+.+ ++|++ +|-.|+-|.
T Consensus 82 ~vDvVf~atp~~~-s~~~a~~~-~aG~~-VId~sa~~R 116 (359)
T 1xyg_A 82 TVDAVFCCLPHGT-TQEIIKEL-PTALK-IVDLSADFR 116 (359)
T ss_dssp GCSEEEECCCTTT-HHHHHHTS-CTTCE-EEECSSTTT
T ss_pred CCCEEEEcCCchh-HHHHHHHH-hCCCE-EEECCcccc
Confidence 4899999999875 45566777 78986 666676663
No 270
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=48.93 E-value=14 Score=36.60 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=31.5
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcC-CCCCEEEE-ecCCCCHH
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQ-PTIRVVAI-IAEGVPEA 117 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~-~gv~~~vi-is~Gf~e~ 117 (608)
+....+++++.. +.|++|++||... ....+++++.+ ..-..+++ .|++++.+
T Consensus 73 i~~~~~~~~~~~---~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~ 127 (283)
T 4e12_A 73 IRYSDDLAQAVK---DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS 127 (283)
T ss_dssp CEEESCHHHHTT---TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH
T ss_pred eEEeCCHHHHhc---cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH
Confidence 456677877544 4899999999852 23445554432 12233444 57888753
No 271
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=48.81 E-value=43 Score=28.36 Aligned_cols=117 Identities=14% Similarity=0.147 Sum_probs=74.9
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
..-+|-+|...-.....+...+.+.| +. +... -+..+.++++.+. ...+|++-++....++.++++.++
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~-~~dlii~d~~l~~~~g~~~~~~l~ 75 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEG--FD-IIQC-------GNAIEAVPVAVKT-HPHLIITEANMPKISGMDLFNSLK 75 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHT--EE-EEEE-------SSHHHHHHHHHHH-CCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcC--Ce-EEEe-------CCHHHHHHHHHcC-CCCEEEEcCCCCCCCHHHHHHHHH
Confidence 34578899888888887777777654 32 2222 2345777777665 357777777644457889999999
Q ss_pred h--CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHHH
Q 007327 246 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEKL 317 (608)
Q Consensus 246 ~--a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~~ 317 (608)
+ .....|||++-.- .. . .....++ ++|+. ..-+.++|...++.++...
T Consensus 76 ~~~~~~~~pii~ls~~-~~------------------~----~~~~~~~-~~g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 76 KNPQTASIPVIALSGR-AT------------------A----KEEAQLL-DMGFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp TSTTTTTSCEEEEESS-CC------------------H----HHHHHHH-HHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCEEEEeCC-CC------------------H----HHHHHHH-hCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 8 3467899988311 11 1 2222333 45653 3458889988888777654
No 272
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=48.44 E-value=1.1e+02 Score=26.10 Aligned_cols=115 Identities=14% Similarity=0.105 Sum_probs=74.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|.........+...+.+.| +. ++.. -+..+.++++.+.+ ..+|++-+.....++.++++.+++
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~ 75 (154)
T 2rjn_A 7 NYTVMLVDDEQPILNSLKRLIKRLG--CN-IITF-------TSPLDALEALKGTS-VQLVISDMRMPEMGGEVFLEQVAK 75 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTT--CE-EEEE-------SCHHHHHHHHTTSC-CSEEEEESSCSSSCHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHcC--Ce-EEEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHHH
Confidence 4468999999888888887777654 33 2222 23467888887654 677777766444578899999988
Q ss_pred CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 247 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 247 a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
.....|||++-. .... .....+++..|+ ...-+.++|...++.+..
T Consensus 76 ~~~~~~ii~ls~-~~~~----------------------~~~~~~~~~g~~~~~l~kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 76 SYPDIERVVISG-YADA----------------------QATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp HCTTSEEEEEEC-GGGH----------------------HHHHHHHHTTCCSEEEESSCCHHHHHHHHHHHHH
T ss_pred hCCCCcEEEEec-CCCH----------------------HHHHHHHhccchheeeeCCCCHHHHHHHHHHHHH
Confidence 656789888731 1110 233344443323 234578888888877664
No 273
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=48.19 E-value=25 Score=34.70 Aligned_cols=54 Identities=19% Similarity=0.370 Sum_probs=35.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc------c--------H---HHH----HHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR------D--------E---YSL----VEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~------~--------~---~~f----~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++++|++..+ |-+ | + +.+ .+..++. ...||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 116 (265)
T 3kqf_A 41 LQNILTQINEEANTRVVILTGA-GEKAFCAGADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGG 116 (265)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-SSSEEECCBCHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhcCCCceEEEEecC-CCCeeeeCcChHHHhccCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4577888889999999999998 611 1 1 112 2223332 37899999987766543
No 274
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=47.79 E-value=44 Score=30.20 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=27.7
Q ss_pred CCHHHHhhcCCCccEEEEeccChh----------cHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFRS----------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~~----------~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. ++|.+|.+..... ....++++|.+.+++.+|.+|+
T Consensus 59 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 59 ADVDKTVA---GQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp HHHHHHHT---TCSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHc---CCCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 34555443 4788887665432 1456777787778888887775
No 275
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=47.67 E-value=90 Score=25.98 Aligned_cols=79 Identities=14% Similarity=0.108 Sum_probs=56.2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|.........+...+.+.|+-+ ... -+..+.++.+.+.+ ..+|++-++....++.+|++.+|+
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~v---~~~-------~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~ 74 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFDS---DMV-------HSAAQALEQVARRP-YAAMTVDLNLPDQDGVSLIRALRR 74 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------CSHHHHHHHHHHSC-CSEEEECSCCSSSCHHHHHHHHHT
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCeE---EEE-------CCHHHHHHHHHhCC-CCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3479999999988888888887765432 222 24567788776654 567777666455679999999998
Q ss_pred --CCCCCCEEEE
Q 007327 247 --GKVNKPVVAW 256 (608)
Q Consensus 247 --a~~~KPVvvl 256 (608)
.....|||++
T Consensus 75 ~~~~~~~~ii~~ 86 (140)
T 3grc_A 75 DSRTRDLAIVVV 86 (140)
T ss_dssp SGGGTTCEEEEE
T ss_pred CcccCCCCEEEE
Confidence 3467788887
No 276
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=47.27 E-value=1.2e+02 Score=29.50 Aligned_cols=20 Identities=10% Similarity=0.012 Sum_probs=16.6
Q ss_pred HHHHHHhcCCCCCEEEEecC
Q 007327 93 ASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 93 ~~~le~~~~~gv~~~viis~ 112 (608)
..++++|.+.|++.+|.+|+
T Consensus 100 ~~ll~a~~~~~v~~~v~~SS 119 (321)
T 3vps_A 100 RHLLALCTSVGVPKVVVGST 119 (321)
T ss_dssp HHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEecC
Confidence 45888998889999888876
No 277
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=47.03 E-value=33 Score=34.52 Aligned_cols=103 Identities=7% Similarity=0.004 Sum_probs=51.8
Q ss_pred CccCCCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEe-CCCCCCcccc-c-cCcee----ecccccCCH
Q 007327 1 MATGQLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGII-NPGAEGFQKL-F-FGQEE----IAIPVHSTV 69 (608)
Q Consensus 1 ~~~~~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~-~p~~~~~~~~-~-~g~ev----~G~~~y~sv 69 (608)
|++...+..+++.|.| ++|. +++.|++.|+. |.++. .+.+...... + .+..+ ..+.-..++
T Consensus 1 mi~~~~~~~~~vlVtG-atG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 72 (357)
T 1rkx_A 1 MINNSFWQGKRVFVTG-HTGFKGGWLSLWLQTMGAT-------VKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKL 72 (357)
T ss_dssp -CCHHHHTTCEEEEET-TTSHHHHHHHHHHHHTTCE-------EEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHH
T ss_pred CCCchhhCCCEEEEEC-CCchHHHHHHHHHHhCCCe-------EEEEeCCCcccchhhHhhccCCceEEEEccccCHHHH
Confidence 5665566667777774 4433 78888887653 34443 1221100000 0 00011 123333445
Q ss_pred HHHhhcCCCccEEEEeccChh-----------------cHHHHHHHhcCCC-CCEEEEecC
Q 007327 70 EAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPT-IRVVAIIAE 112 (608)
Q Consensus 70 ~~i~~~~p~vDlavi~vp~~~-----------------~~~~~le~~~~~g-v~~~viis~ 112 (608)
.++.... ++|.+|-+..... ....++++|.+.+ ++.+|.+|+
T Consensus 73 ~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 73 LESIREF-QPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHH-CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHhc-CCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 5554432 2798887654210 0123677777655 888888887
No 278
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=46.72 E-value=9.5 Score=42.56 Aligned_cols=47 Identities=19% Similarity=0.085 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc-----cHHHHHHHHHhCC-CCCCEEEEE
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR-----DEYSLVEALKQGK-VNKPVVAWV 257 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~-----~~~~f~~~~r~a~-~~KPVvvlk 257 (608)
+.+.|+.+.+||+++.|+||+. +.. ...+..+++++.+ .+||||++-
T Consensus 75 i~~~L~~a~~d~~ik~I~L~in-spGgG~v~~~~~I~~~i~~~k~~gkpvva~~ 127 (593)
T 3bf0_A 75 IVNTIRQAKDDRNITGIVMDLK-NFAGGDQPSMQYIGKALKEFRDSGKPVYAVG 127 (593)
T ss_dssp HHHHHHHHHHCTTCCCEEEECT-EEEECCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEeC-CCCCCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4555667788999999999997 333 3456667777665 579999994
No 279
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=46.63 E-value=1.1e+02 Score=25.40 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=72.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHh-cCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIAR-VTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~-~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
.-+|-+|...-.....+...+.+ .|+- .+... -+..+.++++.+.+ ..+|++-++....++.++++.++
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~--~v~~~-------~~~~~a~~~l~~~~-~dlii~d~~l~~~~g~~~~~~l~ 77 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYA--KIKIA-------YNPFDAGDLLHTVK-PDVVMLDLMMVGMDGFSICHRIK 77 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTC--EEEEE-------CSHHHHHHHHHHTC-CSEEEEETTCTTSCHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCcc--EEEEE-------CCHHHHHHHHHhcC-CCEEEEecccCCCcHHHHHHHHH
Confidence 44688999988888888777776 5543 22222 23457777777654 57777776644457889999999
Q ss_pred hC--CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 246 QG--KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 246 ~a--~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
+. ....|||++-. .... .....+ .++|+ ...-+.++|...++.++.
T Consensus 78 ~~~~~~~~~ii~~s~-~~~~----------------------~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~ 129 (143)
T 3cnb_A 78 STPATANIIVIAMTG-ALTD----------------------DNVSRI-VALGAETCFGKPLNFTLLEKTIKQLVE 129 (143)
T ss_dssp TSTTTTTSEEEEEES-SCCH----------------------HHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred hCccccCCcEEEEeC-CCCH----------------------HHHHHH-HhcCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 83 46678888732 1110 222233 35665 234578888888877665
No 280
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=46.57 E-value=27 Score=37.83 Aligned_cols=121 Identities=8% Similarity=0.022 Sum_probs=62.6
Q ss_pred CCCCcEEEEEcCCch---HHHHHhhC-cccCCCCCCcEEEEeCCCCCC-ccccccCceeecccccCC-----HHHHhhcC
Q 007327 7 FSKTTQALFYNYKQL---PIQRMLDF-DFLCGRETPSVAGIINPGAEG-FQKLFFGQEEIAIPVHST-----VEAACAAH 76 (608)
Q Consensus 7 ~~p~s~avv~g~~~~---~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~-~~~~~~g~ev~G~~~y~s-----v~~i~~~~ 76 (608)
++++.+++|.|+++- +++.+.+. +|.. ..|-..+ |.+.+ +.....|.++.++.+-.+ ++++..
T Consensus 10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~----~~I~vaD-~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~-- 82 (480)
T 2ph5_A 10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKP----SQVTIIA-AEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLE-- 82 (480)
T ss_dssp BCCCSCEEEECCSHHHHHHHHHHHHHBCCCG----GGEEEEE-SSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCC--
T ss_pred ecCCCCEEEECcCHHHHHHHHHHHhCCCCce----eEEEEec-cchhhhhHHhhcCCceeEEeccchhHHHHHHHHhc--
Confidence 344444444466543 66777664 3310 1233455 53332 111122334444444333 333333
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEec---CCCCH------------HHHHHHHHHHHh-CCCeEEcC
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQPTIRVVAIIA---EGVPE------------ADTKQLIAYARS-NNKVVIGP 136 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis---~Gf~e------------~~~~~l~~~a~~-~g~rvlGP 136 (608)
+.|++|-+.+... ..+++++|.++|+..+=.-- .++.. ..++++.+.+++ .|+.|+|.
T Consensus 83 -~~DvVIN~s~~~~-~l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~GtAilg~ 156 (480)
T 2ph5_A 83 -ENDFLIDVSIGIS-SLALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQKTALITH 156 (480)
T ss_dssp -TTCEEEECCSSSC-HHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCSCEECSC
T ss_pred -CCCEEEECCcccc-CHHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCCcEEecC
Confidence 2399998777765 67899999999987543211 11111 245666666644 66667665
No 281
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=46.41 E-value=13 Score=37.68 Aligned_cols=49 Identities=12% Similarity=0.160 Sum_probs=32.8
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCC-CC-CEEEEecCCCC
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQP-TI-RVVAIIAEGVP 115 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~-gv-~~~viis~Gf~ 115 (608)
++++.+.+++.. +.|+++++||+.. ..++++.+... +- ..+|.++-|+.
T Consensus 59 ~~~~~~~~~~~~---~~DlVilavK~~~-~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 59 AAVVRSAAELET---KPDCTLLCIKVVE-GADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp SCEESCGGGCSS---CCSEEEECCCCCT-TCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred eeeECCHHHcCC---CCCEEEEecCCCC-hHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 456667766532 4799999999986 56777777531 11 24666778986
No 282
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=46.19 E-value=16 Score=38.03 Aligned_cols=114 Identities=18% Similarity=0.098 Sum_probs=59.5
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceee-cccccCCHHHHhhcC---------
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEI-AIPVHSTVEAACAAH--------- 76 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~-G~~~y~sv~~i~~~~--------- 76 (608)
|..++|+| |.-|+ +++.+.+..+. .+.++++..+ .... .+ . +-. |++.|.+..++....
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g--~~~~vvaV~d-~~~~----~~-~-~~~~gi~~~~~~~e~l~~~~~~~~did~ 74 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKST--ITYNLVLLAE-AERS----LI-S-KDFSPLNVGSDWKAALAASTTKTLPLDD 74 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCS--SEEEEEEEEC-SSBE----EE-C-SSCSCCSCTTCHHHHHHTCCCBCCCHHH
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCC--CCEEEEEEEE-CChh----hh-c-cccCCCCccccHHHHHhcccCCCCCHHH
Confidence 44678884 22233 77777764210 0123444444 2111 01 0 111 566666666655321
Q ss_pred --------CCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCC-CCH--HHHHHHHHHHHhCCCeEE
Q 007327 77 --------PMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG-VPE--ADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 77 --------p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~G-f~e--~~~~~l~~~a~~~g~rvl 134 (608)
+.+|++|+|+|........++++. +|.. +|+.... ++- ..-++|. .|+++|.++.
T Consensus 75 v~e~~~~~~~~DvVV~~t~~~~~a~~~~~AL~-aGkh-VVtaNkkpla~~~~~~~eL~-~A~~~gv~~~ 140 (358)
T 1ebf_A 75 LIAHLKTSPKPVILVDNTSSAYIAGFYTKFVE-NGIS-IATPNKKAFSSDLATWKALF-SNKPTNGFVY 140 (358)
T ss_dssp HHHHHTTCSSCEEEEECSCCHHHHTTHHHHHH-TTCE-EECCCCGGGSSCHHHHHHHT-CCCTTCCCEE
T ss_pred HHHHhhhccCCcEEEEcCCChHHHHHHHHHHH-CCCe-EEecCcccccCCHHHHHHHH-HHHHcCCEEE
Confidence 123799999998654445555444 6754 4432232 331 2457788 9999997753
No 283
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=45.72 E-value=1.3e+02 Score=25.08 Aligned_cols=123 Identities=11% Similarity=0.114 Sum_probs=79.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|.........+...+.+.|.... +... -+..+.++.+.+.+ ..+|++-++....++.++++.+|+
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~-v~~~-------~~~~~a~~~l~~~~-~dlii~D~~l~~~~g~~~~~~lr~ 75 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQ-LEFV-------DNGAKALYQVQQAK-YDLIILDIGLPIANGFEVMSAVRK 75 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEE-EEEE-------SSHHHHHHHHTTCC-CSEEEECTTCGGGCHHHHHHHHHS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCee-EEEE-------CCHHHHHHHhhcCC-CCEEEEeCCCCCCCHHHHHHHHHh
Confidence 44788999998888888888877655421 1222 23457788776543 567766655344578899999998
Q ss_pred --CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccC-CHHHHHHHHHHHHHHHHh
Q 007327 247 --GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPT-SYEAFESAIKETFEKLVE 319 (608)
Q Consensus 247 --a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~-~~~el~~~~~~~~~~~~~ 319 (608)
.....|||++-...+. .....+ .++|+. ... +.++|...++.+++++..
T Consensus 76 ~~~~~~~pii~~s~~~~~-----------------------~~~~~~-~~~ga~~~l~Kp~~~~~~l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 76 PGANQHTPIVILTDNVSD-----------------------DRAKQC-MAAGASSVVDKSSNNVTDFYGRIYAIFSYWLT 131 (144)
T ss_dssp SSTTTTCCEEEEETTCCH-----------------------HHHHHH-HHTTCSEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEeCCCCH-----------------------HHHHHH-HHcCCCEEEECCCCcHHHHHHHHHHHHHHHHh
Confidence 3467899888321111 222233 356643 234 889999999999988766
Q ss_pred cCC
Q 007327 320 EGK 322 (608)
Q Consensus 320 ~G~ 322 (608)
...
T Consensus 132 ~~~ 134 (144)
T 3kht_A 132 VNH 134 (144)
T ss_dssp TSC
T ss_pred ccC
Confidence 633
No 284
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=45.62 E-value=23 Score=35.27 Aligned_cols=52 Identities=6% Similarity=0.023 Sum_probs=31.1
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccChhc-HHHHHHHhcCCCC-CEEEE-ecCCCCHH
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFRSA-AASSMAALKQPTI-RVVAI-IAEGVPEA 117 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~~~-~~~~le~~~~~gv-~~~vi-is~Gf~e~ 117 (608)
+....++++... +.|++|++||.... ...+++++.+.-- +.+++ .|++++..
T Consensus 88 i~~~~~~~~~~~---~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~ 142 (302)
T 1f0y_A 88 IATSTDAASVVH---STDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT 142 (302)
T ss_dssp EEEESCHHHHTT---SCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH
T ss_pred eEEecCHHHhhc---CCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH
Confidence 455667775544 48999999998532 3456666653211 23333 46788753
No 285
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=45.58 E-value=6.4 Score=41.70 Aligned_cols=77 Identities=12% Similarity=0.018 Sum_probs=43.4
Q ss_pred cEEEEEcCCc--h-HHHHHhhCcccCCCCCCcEEEEeC-CCCCCccccccCceeecccccCCHHHHhh-cCCCccEEEEe
Q 007327 11 TQALFYNYKQ--L-PIQRMLDFDFLCGRETPSVAGIIN-PGAEGFQKLFFGQEEIAIPVHSTVEAACA-AHPMADVFINF 85 (608)
Q Consensus 11 s~avv~g~~~--~-~~~~l~~~~~~~~~g~~~v~~v~~-p~~~~~~~~~~g~ev~G~~~y~sv~~i~~-~~p~vDlavi~ 85 (608)
.++|+ |+++ + +++.+.+.+ ..+++.++. |.+. |.++.|+|+|.. .+++. ...+++.++|+
T Consensus 54 ~v~Ii-GAG~~G~~l~~~l~~~g------~~ivgfiDdd~~~~-------g~~i~GipV~~~-~~l~~~~~~~~~~viia 118 (409)
T 2py6_A 54 RLVIL-GTKGFGAHLMNVRHERP------CEVIAAVDDFRYHS-------GELYYGLPIIST-DRFTELATHDRDLVALN 118 (409)
T ss_dssp EEEEE-CSSSTHHHHHSCSSSCS------SEEEEEECTTTTTS-------CCEETTEEEECH-HHHHHHHHTCTTEEEEE
T ss_pred eEEEE-eCCHHHHHHHHHHHHCC------CEEEEEEeCCcccc-------cCEECCEEEECH-HHHHHHHhCCCCEEEEe
Confidence 45566 5543 3 333333333 346777774 3333 357999999975 55543 12247888888
Q ss_pred ccChhcHHHHHHHhcCCCCC
Q 007327 86 SSFRSAAASSMAALKQPTIR 105 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~ 105 (608)
+.. ...+.+.|.+.|++
T Consensus 119 i~~---r~~i~~~l~~~g~~ 135 (409)
T 2py6_A 119 TCR---YDGPKRFFDQICRT 135 (409)
T ss_dssp CCC---SHHHHHHHHHHHHH
T ss_pred ccH---HHHHHHHHHhcCCC
Confidence 832 24555666554544
No 286
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=45.37 E-value=37 Score=33.18 Aligned_cols=53 Identities=23% Similarity=0.321 Sum_probs=31.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHH----------------HHHHHHHhCC-CCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEY----------------SLVEALKQGK-VNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~----------------~f~~~~r~a~-~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++..+ |- .|-. .+.+..++.. ..||||+..-|..-.
T Consensus 38 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 112 (256)
T 3qmj_A 38 TAQALLDAADDPQVAVVLLTGS-GRGFSAGTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGVG 112 (256)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTEEECCBCHHHHHHHHHSSSCCCCSSHHHHHHHHHHHCCSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCCcccCcCHHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeehh
Confidence 3456666777777777777665 41 0111 1222223322 689999999887654
No 287
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=45.25 E-value=31 Score=36.01 Aligned_cols=91 Identities=12% Similarity=-0.022 Sum_probs=48.0
Q ss_pred CcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHH-HHhhcCCCccEEEE
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVE-AACAAHPMADVFIN 84 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~-~i~~~~p~vDlavi 84 (608)
..++|| |++|. +++.|.+.+|. ..++....+ ....|+...+.|.+ +.+ ..++ +... ++|+++.
T Consensus 3 ~kVaIv-GATG~vG~eLlrlL~~~~~p---~~el~~~as-~~saG~~~~~~~~~---~~~-~~~~~~~~~---~~Dvvf~ 70 (366)
T 3pwk_A 3 YTVAVV-GATGAVGAQMIKMLEESTLP---IDKIRYLAS-ARSAGKSLKFKDQD---ITI-EETTETAFE---GVDIALF 70 (366)
T ss_dssp EEEEEE-TTTSHHHHHHHHHHHTCCCC---EEEEEEEEC-TTTTTCEEEETTEE---EEE-EECCTTTTT---TCSEEEE
T ss_pred cEEEEE-CCCChHHHHHHHHHhcCCCC---cEEEEEEEc-cccCCCcceecCCC---ceE-eeCCHHHhc---CCCEEEE
Confidence 468888 54443 78877777553 112332222 44444322233311 111 1111 1112 4899999
Q ss_pred eccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 85 FSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
|+|... .....+.+.++|++ +|-.|+-|
T Consensus 71 a~~~~~-s~~~a~~~~~~G~~-vIDlSa~~ 98 (366)
T 3pwk_A 71 SAGSST-SAKYAPYAVKAGVV-VVDNTSYF 98 (366)
T ss_dssp CSCHHH-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred CCChHh-HHHHHHHHHHCCCE-EEEcCCcc
Confidence 998764 45555666668886 56667655
No 288
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=44.89 E-value=74 Score=26.54 Aligned_cols=82 Identities=12% Similarity=0.151 Sum_probs=56.1
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
..-+|-+|..+-.....+...+.+.|+ . +... -+..+.++.+.+.....+|++-++....++-++++.+|
T Consensus 14 ~~~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~ 83 (138)
T 2b4a_A 14 QPFRVTLVEDEPSHATLIQYHLNQLGA--E-VTVH-------PSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVK 83 (138)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCC--E-EEEe-------CCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 456799999999888888888877654 2 2222 23467788876612356776665533457888999998
Q ss_pred hCCCCCCEEEEE
Q 007327 246 QGKVNKPVVAWV 257 (608)
Q Consensus 246 ~a~~~KPVvvlk 257 (608)
+.....|||++-
T Consensus 84 ~~~~~~~ii~ls 95 (138)
T 2b4a_A 84 EQTKQPSVLILT 95 (138)
T ss_dssp TSSSCCEEEEEE
T ss_pred hhCCCCCEEEEE
Confidence 855677888874
No 289
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=44.85 E-value=64 Score=31.63 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=47.9
Q ss_pred CCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCce--eecccccCCHHHHhhcCCC
Q 007327 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQE--EIAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~e--v~G~~~y~sv~~i~~~~p~ 78 (608)
..+.++.+++|-|++|. +++.|++.||. |.++.-..... .+ +-+ ...+.-..++.++.... +
T Consensus 7 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~-------V~~~~r~~~~~---~l-~~~~~~~Dl~d~~~~~~~~~~~-~ 74 (321)
T 2pk3_A 7 HHHHGSMRALITGVAGFVGKYLANHLTEQNVE-------VFGTSRNNEAK---LP-NVEMISLDIMDSQRVKKVISDI-K 74 (321)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTCE-------EEEEESCTTCC---CT-TEEEEECCTTCHHHHHHHHHHH-C
T ss_pred ccccCcceEEEECCCChHHHHHHHHHHHCCCE-------EEEEecCCccc---cc-eeeEEECCCCCHHHHHHHHHhc-C
Confidence 34566677777776665 77888887653 44444121110 00 101 11233334455554432 3
Q ss_pred ccEEEEeccChh-----------------cHHHHHHHhcCC-CCCEEEEecC
Q 007327 79 ADVFINFSSFRS-----------------AAASSMAALKQP-TIRVVAIIAE 112 (608)
Q Consensus 79 vDlavi~vp~~~-----------------~~~~~le~~~~~-gv~~~viis~ 112 (608)
+|.+|-+..... ....++++|.+. +++.+|.+|+
T Consensus 75 ~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 126 (321)
T 2pk3_A 75 PDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGS 126 (321)
T ss_dssp CSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred CCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence 799887654321 023567777653 6888888876
No 290
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=44.80 E-value=76 Score=31.66 Aligned_cols=92 Identities=8% Similarity=-0.141 Sum_probs=50.7
Q ss_pred CcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCcee---------ecccccCCHHHHhhcCCC
Q 007327 10 TTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEE---------IAIPVHSTVEAACAAHPM 78 (608)
Q Consensus 10 ~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev---------~G~~~y~sv~~i~~~~p~ 78 (608)
++++|+| |.-|. ....|.+.|+. |..+. ........ -.|-.+ ..++++.+.+++ + +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~-------V~~~~-r~~~~~i~-~~g~~~~~~~g~~~~~~~~~~~~~~~~-~---~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGED-------VHFLL-RRDYEAIA-GNGLKVFSINGDFTLPHVKGYRAPEEI-G---P 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCC-------EEEEC-STTHHHHH-HTCEEEEETTCCEEESCCCEESCHHHH-C---C
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCe-------EEEEE-cCcHHHHH-hCCCEEEcCCCeEEEeeceeecCHHHc-C---C
Confidence 5789997 44444 55666666542 44454 22110000 011111 134456677664 3 4
Q ss_pred ccEEEEeccChhcHHHHHHHhcC-CCC-CEEEEecCCCC
Q 007327 79 ADVFINFSSFRSAAASSMAALKQ-PTI-RVVAIIAEGVP 115 (608)
Q Consensus 79 vDlavi~vp~~~~~~~~le~~~~-~gv-~~~viis~Gf~ 115 (608)
.|+++++||+.. ..++++.+.. .+- ..+|.+.-|+.
T Consensus 70 ~D~vilavk~~~-~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 70 MDLVLVGLKTFA-NSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp CSEEEECCCGGG-GGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred CCEEEEecCCCC-cHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 899999999976 5677777753 121 24555678986
No 291
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=44.51 E-value=5.4 Score=40.50 Aligned_cols=93 Identities=6% Similarity=-0.065 Sum_probs=53.0
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc---cCce-eecccccCCHHHHhhcCCCccEE
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF---FGQE-EIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~---~g~e-v~G~~~y~sv~~i~~~~p~vDla 82 (608)
-++|+||| |..|. +.+++. .||. |..++ +.... .+.. .-++ ..++....|++++ . +.|++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~-------V~v~d-~~~~~-~~~~~~~l~~~~~~~i~~~~~~~~~-~---~aDlV 77 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHE-------VVLQD-VSEKA-LEAAREQIPEELLSKIEFTTTLEKV-K---DCDIV 77 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSE-------EEEEC-SCHHH-HHHHHHHSCGGGGGGEEEESSCTTG-G---GCSEE
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCE-------EEEEE-CCHHH-HHHHHHHHHHHHhCCeEEeCCHHHH-c---CCCEE
Confidence 46888896 33344 888888 8874 55555 42210 0000 0001 1256566677763 3 37999
Q ss_pred EEeccChhcHH-HHHHHhcCCCCCEEEEe--cCCCCHH
Q 007327 83 INFSSFRSAAA-SSMAALKQPTIRVVAII--AEGVPEA 117 (608)
Q Consensus 83 vi~vp~~~~~~-~~le~~~~~gv~~~vii--s~Gf~e~ 117 (608)
|.+||....+. .++.++... +..|+. ||.++.+
T Consensus 78 ieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~ 113 (293)
T 1zej_A 78 MEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVD 113 (293)
T ss_dssp EECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHH
T ss_pred EEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHH
Confidence 99999976443 444556544 554443 5677764
No 292
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=44.37 E-value=61 Score=27.46 Aligned_cols=81 Identities=10% Similarity=-0.057 Sum_probs=50.0
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.-+-.....+...+...+.|+..+-.. -+..+.++++.+. ...+|++-+.....++.++++.+++..
T Consensus 4 ~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~-------~~~~~al~~~~~~-~~dlvllD~~lp~~~g~~l~~~l~~~~ 75 (141)
T 3cu5_A 4 RILIVDDEKLTRDGLIANINWKALSFDQIDQA-------DDGINAIQIALKH-PPNVLLTDVRMPRMDGIELVDNILKLY 75 (141)
T ss_dssp EEEEECSCHHHHHHHHHHCCGGGSCCSEEEEE-------SSHHHHHHHHTTS-CCSEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEEeCCHHHHHHHHHHHHHccCCcEEeeec-------ccHHHHHHHHhcC-CCCEEEEeCCCCCCCHHHHHHHHHhhC
Confidence 35666666655555555554444555432122 2345777777654 356777766644457899999998855
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 76 ~~~~ii~ls 84 (141)
T 3cu5_A 76 PDCSVIFMS 84 (141)
T ss_dssp TTCEEEEEC
T ss_pred CCCcEEEEe
Confidence 667888773
No 293
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=44.37 E-value=9.5 Score=36.29 Aligned_cols=90 Identities=11% Similarity=0.007 Sum_probs=48.3
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEec
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFS 86 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~v 86 (608)
.++++|+| |..|+ +.+.+.+.|+. |..++ .... ....+.. .|+... +..++.. +.|++++++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~-------V~~~~-r~~~-~~~~~~~---~g~~~~-~~~~~~~---~~DvVi~av 91 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFK-------VVVGS-RNPK-RTARLFP---SAAQVT-FQEEAVS---SPEVIFVAV 91 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC-------EEEEE-SSHH-HHHHHSB---TTSEEE-EHHHHTT---SCSEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCE-------EEEEe-CCHH-HHHHHHH---cCCcee-cHHHHHh---CCCEEEECC
Confidence 36788885 22233 77888887643 44555 3211 0011100 145544 6777654 489999999
Q ss_pred cChhcHHHHHH--HhcCCCCCEEEEecCCCCHH
Q 007327 87 SFRSAAASSMA--ALKQPTIRVVAIIAEGVPEA 117 (608)
Q Consensus 87 p~~~~~~~~le--~~~~~gv~~~viis~Gf~e~ 117 (608)
|+.. ...+++ ... .+ +.+|-+++|.+..
T Consensus 92 ~~~~-~~~v~~l~~~~-~~-~~vv~~s~g~~~~ 121 (215)
T 2vns_A 92 FREH-YSSLCSLSDQL-AG-KILVDVSNPTEQE 121 (215)
T ss_dssp CGGG-SGGGGGGHHHH-TT-CEEEECCCCCHHH
T ss_pred ChHH-HHHHHHHHHhc-CC-CEEEEeCCCcccc
Confidence 9864 444443 121 22 3455567787643
No 294
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=50.13 E-value=4.8 Score=38.28 Aligned_cols=91 Identities=12% Similarity=-0.033 Sum_probs=49.4
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
...++++||| |..|. +.++|.+.|+. |..++ +... ...+ .-.|+... +..++.. +.|++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~-------V~~~~-r~~~--~~~~---~~~g~~~~-~~~~~~~---~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYS-------VVFGS-RNPQ--VSSL---LPRGAEVL-CYSEAAS---RSDVIVL 79 (201)
Confidence 5567888986 33333 77788877653 33333 3221 1111 11355555 6666544 4799999
Q ss_pred eccChhcHHHHHHHhcCCCC-CEEEEecCCCCH
Q 007327 85 FSSFRSAAASSMAALKQPTI-RVVAIIAEGVPE 116 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~~gv-~~~viis~Gf~e 116 (608)
+||+.. +..+++ .....- +.+|-++.|++.
T Consensus 80 av~~~~-~~~v~~-l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 80 AVHREH-YDFLAE-LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 999974 566653 221111 233445667763
No 295
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=43.79 E-value=14 Score=41.30 Aligned_cols=54 Identities=24% Similarity=0.260 Sum_probs=38.6
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCC-cc---HHHHHHHHHhCC-CCCCEEEEEeCCCcc
Q 007327 209 TLSDHILRFNNIPQVKMMVVLGELGG-RD---EYSLVEALKQGK-VNKPVVAWVSGTCAR 263 (608)
Q Consensus 209 ~~~d~l~~l~~Dp~T~~I~ly~E~g~-~~---~~~f~~~~r~a~-~~KPVvvlk~Grs~~ 263 (608)
.+.+.|+.+.+||++|+|+|.++ +- .+ .+.+.+.+++.. .+||||+...|....
T Consensus 326 ~l~~~L~~a~~d~~vkaVVL~i~-spGG~~~~~~~i~~~i~~l~~~~kPVia~v~g~Aas 384 (593)
T 3bf0_A 326 TTAAQIRDARLDPKVKAIVLRVN-SPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAAS 384 (593)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEE-EEEECHHHHHHHHHHHHHHHHTTCCEEEEEEEEEET
T ss_pred HHHHHHHHHHhCCCCCEEEEEec-CCCCCHHHHHHHHHHHHHHHhCCCCEEEEECCChHH
Confidence 46788888899999999999998 32 22 233444555543 579999998776544
No 296
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=43.56 E-value=83 Score=28.70 Aligned_cols=35 Identities=6% Similarity=0.126 Sum_probs=21.4
Q ss_pred CccEEEEeccCh--------hcHHHHHHHhcCCCCCEEEEecC
Q 007327 78 MADVFINFSSFR--------SAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 78 ~vDlavi~vp~~--------~~~~~~le~~~~~gv~~~viis~ 112 (608)
.+|.+|.+.... .....++++|.+.|++.+|.+|+
T Consensus 61 ~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 DQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp TCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred CCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 378777665442 11245677777666777777665
No 297
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=43.54 E-value=48 Score=32.15 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=25.1
Q ss_pred CccEEEEeccChhcHHHHHHHhcCC-C-CCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQP-T-IRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~-g-v~~~viis~Gf~ 115 (608)
+.|+++++||+.. +.++++.+... + -..+|.++.|+.
T Consensus 63 ~~d~vi~~v~~~~-~~~v~~~l~~~l~~~~~vv~~~~g~~ 101 (291)
T 1ks9_A 63 TSDLLLVTLKAWQ-VSDAVKSLASTLPVTTPILLIHNGMG 101 (291)
T ss_dssp TCSEEEECSCGGG-HHHHHHHHHTTSCTTSCEEEECSSSC
T ss_pred CCCEEEEEecHHh-HHHHHHHHHhhCCCCCEEEEecCCCC
Confidence 4799999999986 77888777532 1 123455577774
No 298
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=43.05 E-value=36 Score=34.01 Aligned_cols=92 Identities=13% Similarity=0.032 Sum_probs=54.7
Q ss_pred HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE---------------EcCCcccccccCcccccccCCccccccc
Q 007327 97 AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDNIIH 161 (608)
Q Consensus 97 e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv---------------lGPNc~Gi~~~~~~~l~~~~~~~~~~~p 161 (608)
+++.+.|+..++++++-......+++.+.|++.|+.+ +|+..+|+-|.+...+ ...+.....
T Consensus 136 ~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~ 212 (272)
T 3tsm_A 136 YEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSRLLGVNNRNLRSF---EVNLAVSER 212 (272)
T ss_dssp HHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHH
T ss_pred HHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCEEEECCCCCccC---CCChHHHHH
Confidence 3344589999999998887777788888888888753 4777778765432011 001100000
Q ss_pred ccCCCCCcEEEEecChhHHHHHHHHHHhcC
Q 007327 162 CKLYRPGSVGFVSKSGGMSNELYNTIARVT 191 (608)
Q Consensus 162 ~~~~~~G~valvSQSG~l~~~~~~~~~~~g 191 (608)
....-|.++-+|+-||--..+=+..+.+.|
T Consensus 213 L~~~ip~~~~vIaesGI~t~edv~~l~~~G 242 (272)
T 3tsm_A 213 LAKMAPSDRLLVGESGIFTHEDCLRLEKSG 242 (272)
T ss_dssp HHHHSCTTSEEEEESSCCSHHHHHHHHTTT
T ss_pred HHHhCCCCCcEEEECCCCCHHHHHHHHHcC
Confidence 001134467788888876666555555444
No 299
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=42.51 E-value=50 Score=32.19 Aligned_cols=85 Identities=6% Similarity=-0.027 Sum_probs=48.8
Q ss_pred CcEEEEE-c-CCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 10 TTQALFY-N-YKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 10 ~s~avv~-g-~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
++|+||| | +++.+.++|.+.|+. |.+++ . .+++ . +.| +++||
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~-------V~~~~-~----------------------~~~~-~---~aD--ilavP 50 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHY-------VTVLH-A----------------------PEDI-R---DFE--LVVID 50 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCE-------EEECS-S----------------------GGGG-G---GCS--EEEEC
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCE-------EEEec-C----------------------HHHh-c---cCC--EEEEc
Confidence 5788886 3 445588888888653 43443 1 1333 2 268 89999
Q ss_pred ChhcHHHHHHHhcCC-CCCEEEEecCC-CCHHHHHHHHHHHHhCCCeEEc
Q 007327 88 FRSAAASSMAALKQP-TIRVVAIIAEG-VPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 88 ~~~~~~~~le~~~~~-gv~~~viis~G-f~e~~~~~l~~~a~~~g~rvlG 135 (608)
.. .+.++++.+... .-..+|+-++| .+. ++.+.+++.|.+++|
T Consensus 51 ~~-ai~~vl~~l~~~l~~g~ivvd~sgs~~~----~vl~~~~~~g~~fvg 95 (232)
T 3dfu_A 51 AH-GVEGYVEKLSAFARRGQMFLHTSLTHGI----TVMDPLETSGGIVMS 95 (232)
T ss_dssp SS-CHHHHHHHHHTTCCTTCEEEECCSSCCG----GGGHHHHHTTCEEEE
T ss_pred HH-HHHHHHHHHHHhcCCCCEEEEECCcCHH----HHHHHHHhCCCcEEE
Confidence 97 478888887642 22345554455 443 233333455555444
No 300
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=42.41 E-value=43 Score=28.71 Aligned_cols=80 Identities=14% Similarity=0.022 Sum_probs=50.4
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.........+...+.+.. |+..+... -+..+.++.+.++....+|++-++....++.++++.+++..
T Consensus 5 ~iLivdd~~~~~~~l~~~L~~~~-g~~~v~~~-------~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~ 76 (154)
T 2qsj_A 5 VVLIVDDHHLIRAGAKNLLEGAF-SGMRVEGA-------ETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFD 76 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHC-TTEEEEEE-------SSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCC-CceEEEEe-------cCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhC
Confidence 47788888777777777776651 33333332 23457888887745567777766533346778899988866
Q ss_pred CCCCEEEE
Q 007327 249 VNKPVVAW 256 (608)
Q Consensus 249 ~~KPVvvl 256 (608)
...|||++
T Consensus 77 ~~~~ii~l 84 (154)
T 2qsj_A 77 PSNAVALI 84 (154)
T ss_dssp TTSEEEEC
T ss_pred CCCeEEEE
Confidence 67788887
No 301
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=42.28 E-value=29 Score=34.01 Aligned_cols=54 Identities=26% Similarity=0.328 Sum_probs=36.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c---c---------HHHHHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R---D---------EYSLVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~---~---------~~~f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- . | .+.+.+..++.. ..||||+..-|..-.|
T Consensus 38 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 106 (255)
T 3p5m_A 38 LSVHIRDAEADESVRAVLLTGA-GRAFCSGGDLTGGDTAGAADAANRVVRAITSLPKPVIAGVHGAAVGF 106 (255)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCEECC---CHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCeEEEEEECC-CCCccCCCChhhhcchHHHHHHHHHHHHHHhCCCCEEEEeCCeehhh
Confidence 4577888899999999999988 51 0 1 012223333332 7899999987776543
No 302
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=42.10 E-value=50 Score=27.72 Aligned_cols=115 Identities=11% Similarity=0.081 Sum_probs=72.7
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCC--ccHHHHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGG--RDEYSLVEAL 244 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~--~~~~~f~~~~ 244 (608)
.-+|-+|.........+...+.+.|+ . ++... +..+.++.+.+.+ ..+|++-+.... .++-++++.+
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~~-------~~~~a~~~l~~~~-~dlvi~D~~l~~~~~~g~~~~~~l 74 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDV--T-IQCFA-------SAESFMRQQISDD-AIGMIIEAHLEDKKDSGIELLETL 74 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSS--E-EEEES-------SHHHHTTSCCCTT-EEEEEEETTGGGBTTHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCc--E-EEEeC-------CHHHHHHHHhccC-CCEEEEeCcCCCCCccHHHHHHHH
Confidence 34788999998888888887776654 2 22222 3456677665543 566666655334 5688999999
Q ss_pred HhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHH
Q 007327 245 KQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 316 (608)
Q Consensus 245 r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 316 (608)
|+.....|||++-.-... .....+ .++|+. ..-+.++|...++.+...
T Consensus 75 ~~~~~~~~ii~~s~~~~~-----------------------~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 75 VKRGFHLPTIVMASSSDI-----------------------PTAVRA-MRASAADFIEKPFIEHVLVHDVQQIING 126 (136)
T ss_dssp HHTTCCCCEEEEESSCCH-----------------------HHHHHH-HHTTCSEEEESSBCHHHHHHHHHHHHHH
T ss_pred HhCCCCCCEEEEEcCCCH-----------------------HHHHHH-HHcChHHheeCCCCHHHHHHHHHHHHhc
Confidence 986677898887321111 222233 356653 345888999888877763
No 303
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=41.87 E-value=37 Score=29.55 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=57.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCC-CccEEEEEEecCCccHHHHHHHHHh
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIP-QVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp-~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
=+|-+|...-.....+...+.+.|+-+-..+ .+..+.++.+.+.+ ...+|++-++....++.++++.+|+
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~---------~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~ 107 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFNIIDTA---------ADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIME 107 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEE---------SSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEE---------CCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHh
Confidence 3799999999888888888877654332122 23456777776642 4567777666445678999999998
Q ss_pred CCCCCCEEEEE
Q 007327 247 GKVNKPVVAWV 257 (608)
Q Consensus 247 a~~~KPVvvlk 257 (608)
.....|||++-
T Consensus 108 ~~~~~~ii~ls 118 (157)
T 3hzh_A 108 FDKNARVIMIS 118 (157)
T ss_dssp HCTTCCEEEEE
T ss_pred hCCCCcEEEEe
Confidence 77788988883
No 304
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=41.77 E-value=69 Score=31.33 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=48.2
Q ss_pred cEEEEecChhHHHHHHHHHHhc-CCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 169 SVGFVSKSGGMSNELYNTIARV-TDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~-g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
+|+++.-+|.++..+...+.+. ++-+..++..+++ +.+++. .++ .+++ | +..+....+.++.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d------l~~~~~---~~~--DvvI---D--fT~p~a~~~~~~~a 65 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP------LSLLTD---GNT--EVVI---D--FTHPDVVMGNLEFL 65 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC------THHHHH---TTC--CEEE---E--CSCTTTHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC------HHHHhc---cCC--cEEE---E--ccChHHHHHHHHHH
Confidence 4889999999999999887654 7766666654422 233332 233 4443 3 33444444444432
Q ss_pred -CCCCCEEEEEeCCCc
Q 007327 248 -KVNKPVVAWVSGTCA 262 (608)
Q Consensus 248 -~~~KPVvvlk~Grs~ 262 (608)
..+||+|+-++|-++
T Consensus 66 ~~~g~~~VigTTG~~~ 81 (245)
T 1p9l_A 66 IDNGIHAVVGTTGFTA 81 (245)
T ss_dssp HHTTCEEEECCCCCCH
T ss_pred HHcCCCEEEcCCCCCH
Confidence 278999998877554
No 305
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=41.23 E-value=1.2e+02 Score=25.84 Aligned_cols=114 Identities=10% Similarity=0.101 Sum_probs=72.9
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|...-.....+...+.. | +. +.. -.+..+.++.+.+.....+|++-++....++-++++.+|+.
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~-~--~~-v~~-------~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~ 73 (151)
T 3kcn_A 5 ERILLVDDDYSLLNTLKRNLSF-D--FE-VTT-------CESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLI 73 (151)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT-T--SE-EEE-------ESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHhcc-C--ce-EEE-------eCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhc
Confidence 3688888888777777666643 3 32 222 23456888888876446788887775556889999999986
Q ss_pred CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcC-C----cccCCHHHHHHHHHHHHHH
Q 007327 248 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG-A----VVPTSYEAFESAIKETFEK 316 (608)
Q Consensus 248 ~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG-v----i~v~~~~el~~~~~~~~~~ 316 (608)
....|||++-. .... .....+++ .| + ...-+.++|...++.+++.
T Consensus 74 ~~~~~ii~~s~-~~~~----------------------~~~~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 74 SPNSVYLMLTG-NQDL----------------------TTAMEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp CSSCEEEEEEC-GGGH----------------------HHHHHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEC-CCCH----------------------HHHHHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 66778887731 1110 22333443 34 3 2345888888888776653
No 306
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=40.79 E-value=1.4e+02 Score=24.84 Aligned_cols=83 Identities=5% Similarity=0.014 Sum_probs=57.2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhc-----CCCccEEEEEEecCCccHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNN-----IPQVKMMVVLGELGGRDEYSLV 241 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~-----Dp~T~~I~ly~E~g~~~~~~f~ 241 (608)
+-+|-+|..+-.....+...+.+.|.... +.. --+..+.++++.+ +....+|++-++....++.+++
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~~~~-v~~-------~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~ 78 (143)
T 2qvg_A 7 KVDILYLEDDEVDIQSVERVFHKISSLIK-IEI-------AKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFL 78 (143)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHHCTTCC-EEE-------ESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCce-EEE-------ECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHH
Confidence 45789999999888888888877665322 111 2345688888876 2456777777664445788999
Q ss_pred HHHHhCC--CCCCEEEEE
Q 007327 242 EALKQGK--VNKPVVAWV 257 (608)
Q Consensus 242 ~~~r~a~--~~KPVvvlk 257 (608)
+.+|+.. ...|||++-
T Consensus 79 ~~l~~~~~~~~~~ii~ls 96 (143)
T 2qvg_A 79 KELRDDSSFTDIEVFVLT 96 (143)
T ss_dssp HHHTTSGGGTTCEEEEEE
T ss_pred HHHHcCccccCCcEEEEe
Confidence 9998854 567888873
No 307
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=40.62 E-value=45 Score=34.97 Aligned_cols=36 Identities=14% Similarity=0.028 Sum_probs=26.3
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++|+++.|.|... .....+.+.++|++ +|-.|+-|.
T Consensus 93 ~~Dvvf~alp~~~-s~~~~~~~~~~G~~-VIDlSa~fR 128 (381)
T 3hsk_A 93 ECDVVFSGLDADV-AGDIEKSFVEAGLA-VVSNAKNYR 128 (381)
T ss_dssp GCSEEEECCCHHH-HHHHHHHHHHTTCE-EEECCSTTT
T ss_pred cCCEEEECCChhH-HHHHHHHHHhCCCE-EEEcCCccc
Confidence 4899999999865 45566666668887 666677663
No 308
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=40.47 E-value=90 Score=26.55 Aligned_cols=117 Identities=9% Similarity=-0.007 Sum_probs=76.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
.+.+|-+|...-.+...+...+.+.| ....|.. --+..+.++.+.+. ...+|++-++....++.++++.+|
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~--~~~~v~~------~~~~~~a~~~l~~~-~~dlii~d~~l~~~~g~~~~~~l~ 84 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSG--SVNVVGE------ADDGAAALELIKAH-LPDVALLDYRMPGMDGAQVAAAVR 84 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHS--SEEEEEE------ESSHHHHHHHHHHH-CCSEEEEETTCSSSCHHHHHHHHH
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCC--CeEEEEE------eCCHHHHHHHHHhc-CCCEEEEeCCCCCCCHHHHHHHHH
Confidence 56789999999998888888887665 2222321 12345777777654 356777776645567899999999
Q ss_pred hCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 246 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 246 ~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
+.....|||++- +.... .....+ .++|+. ...+.++|...++.++.
T Consensus 85 ~~~~~~~ii~~s-~~~~~----------------------~~~~~~-~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 85 SYELPTRVLLIS-AHDEP----------------------AIVYQA-LQQGAAGFLLKDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp HTTCSCEEEEEE-SCCCH----------------------HHHHHH-HHTTCSEEEETTCCHHHHHHHHHHHHH
T ss_pred hcCCCCeEEEEE-ccCCH----------------------HHHHHH-HHcCCCEEEecCCCHHHHHHHHHHHHc
Confidence 876677888873 11111 222233 356653 34578888888877665
No 309
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=40.03 E-value=1.1e+02 Score=24.27 Aligned_cols=78 Identities=8% Similarity=0.075 Sum_probs=50.5
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|..+-.....+...+.+.|+ . +... -+..+.++++.+. ...+|++-++....++.++++.+|+..
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~-v~~~-------~~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~ 71 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGY--E-IDTA-------ENGEEALKKFFSG-NYDLVILDIEMPGISGLEVAGEIRKKK 71 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHHS-CCSEEEECSCCSSSCHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCC--E-EEEe-------CCHHHHHHHHhcC-CCCEEEEECCCCCCCHHHHHHHHHccC
Confidence 466777777777777777776544 2 2222 2345777777654 356777666633457889999998865
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 72 ~~~~ii~~s 80 (116)
T 3a10_A 72 KDAKIILLT 80 (116)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEE
Confidence 677888874
No 310
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=39.98 E-value=89 Score=31.28 Aligned_cols=108 Identities=9% Similarity=0.000 Sum_probs=60.0
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCC------------CCCCCCCHHHHHHHhh----cCCCccEEEEEEec
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGG------------DVFPGSTLSDHILRFN----NIPQVKMMVVLGEL 232 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn------------~~~~dv~~~d~l~~l~----~Dp~T~~I~ly~E~ 232 (608)
+||+|.-+|.++...+..+.+.+.-+..+++.-. .. -.++.|+++++. +||+..+|.+..-
T Consensus 5 rvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~l~~~~~~vD~V~I~tP- 81 (312)
T 3o9z_A 5 RFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEF--FTEPEAFEAYLEDLRDRGEGVDYLSIASP- 81 (312)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEE--ESCHHHHHHHHHHHHHTTCCCSEEEECSC-
T ss_pred EEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCce--eCCHHHHHHHhhhhcccCCCCcEEEECCC-
Confidence 4667766666666555555555544444433211 12 235677775543 6899999887655
Q ss_pred CCccHHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccC
Q 007327 233 GGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPT 301 (608)
Q Consensus 233 g~~~~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~ 301 (608)
.-...+-..++++ .+|+|++=||=.... ..++...++.++.|+...-
T Consensus 82 ~~~H~~~~~~al~---aGkhVl~EKPla~~~-------------------~ea~~l~~~a~~~g~~~~v 128 (312)
T 3o9z_A 82 NHLHYPQIRMALR---LGANALSEKPLVLWP-------------------EEIARLKELEARTGRRVYT 128 (312)
T ss_dssp GGGHHHHHHHHHH---TTCEEEECSSSCSCH-------------------HHHHHHHHHHHHHCCCEEE
T ss_pred chhhHHHHHHHHH---CCCeEEEECCCCCCH-------------------HHHHHHHHHHHHcCCEEEE
Confidence 2222222333333 689999877543321 1225555677888886533
No 311
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=39.95 E-value=1.2e+02 Score=25.21 Aligned_cols=112 Identities=13% Similarity=0.120 Sum_probs=71.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|..+-.....+...+.+.|+-+ +.. -+..+.++++.+. ...+|++-+ ....++.++++.+++.
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~l~~~-~~dlvi~d~-~~~~~g~~~~~~l~~~ 72 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGFNV---IWA-------KNEQEAFTFLRRE-KIDLVFVDV-FEGEESLNLIRRIREE 72 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTCEE---EEE-------SSHHHHHHHHTTS-CCSEEEEEC-TTTHHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCEE---EEE-------CCHHHHHHHHhcc-CCCEEEEeC-CCCCcHHHHHHHHHHH
Confidence 368888888888888877777655422 222 2456788888765 356666665 3445677889988876
Q ss_pred CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 248 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 248 ~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
....|||++-..... .....+ .++|+. ..-+.++|...++.+..
T Consensus 73 ~~~~pii~ls~~~~~-----------------------~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~ 120 (142)
T 2qxy_A 73 FPDTKVAVLSAYVDK-----------------------DLIINS-VKAGAVDYILKPFRLDYLLERVKKIIS 120 (142)
T ss_dssp CTTCEEEEEESCCCH-----------------------HHHHHH-HHHTCSCEEESSCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-----------------------HHHHHH-HHCCcceeEeCCCCHHHHHHHHHHHHh
Confidence 667899888321111 222233 345543 23578888888877665
No 312
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=39.74 E-value=41 Score=33.19 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=33.6
Q ss_pred hcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE----------------cCCcccccccC
Q 007327 99 LKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI----------------GPATVGGIQAG 145 (608)
Q Consensus 99 ~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl----------------GPNc~Gi~~~~ 145 (608)
+.+.|...+.++.+-......+++.+.|++.|+-++ ||..+|+-|.+
T Consensus 119 a~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~iIGinnr~ 181 (251)
T 1i4n_A 119 ASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRD 181 (251)
T ss_dssp HHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCSEEEEECBC
T ss_pred HHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCCEEEEeCcc
Confidence 445788888888876666667777788888776542 78888876644
No 313
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=39.45 E-value=54 Score=27.32 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=73.8
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CccHHHHHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALK 245 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g-~~~~~~f~~~~r 245 (608)
.-+|-+|..+-.....+...+.+.|+-+...++ +..+.++++.+.+ ..+|++-++.. ..++.++++.++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~---------~~~~a~~~~~~~~-~dlii~d~~~~~~~~g~~~~~~l~ 78 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGYDVLGVFD---------NGEEAVRCAPDLR-PDIALVDIMLCGALDGVETAARLA 78 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTCEEEEEES---------SHHHHHHHHHHHC-CSEEEEESSCCSSSCHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCeeEEEEC---------CHHHHHHHHHhCC-CCEEEEecCCCCCCCHHHHHHHHH
Confidence 447999999988888888888776543321122 3456677776643 56777776632 457889999998
Q ss_pred hCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHH
Q 007327 246 QGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 316 (608)
Q Consensus 246 ~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 316 (608)
+. ...|||++-..... .....+ .++|+. ..-+.++|...++.++..
T Consensus 79 ~~-~~~~ii~ls~~~~~-----------------------~~~~~~-~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 79 AG-CNLPIIFITSSQDV-----------------------ETFQRA-KRVNPFGYLAKPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp HH-SCCCEEEEECCCCH-----------------------HHHHHH-HTTCCSEEEEESCCHHHHHHHHHHHHHH
T ss_pred hC-CCCCEEEEecCCCH-----------------------HHHHHH-HhcCCCEEEeCCCCHHHHHHHHHHHHhc
Confidence 86 67899988321111 222233 356643 345888988888877654
No 314
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=39.17 E-value=26 Score=37.72 Aligned_cols=60 Identities=13% Similarity=0.158 Sum_probs=40.1
Q ss_pred CHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 68 TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++.++.. ++|++|.++|... ...+.++|.+.|+..+. .+-+.+ ...++.+.|++.|+.++
T Consensus 81 ~l~~~l~---~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd--~~~~~p-~~~~Ll~~Ak~aGv~~i 140 (467)
T 2axq_A 81 ALDKVLA---DNDVVISLIPYTF-HPNVVKSAIRTKTDVVT--SSYISP-ALRELEPEIVKAGITVM 140 (467)
T ss_dssp HHHHHHH---TSSEEEECSCGGG-HHHHHHHHHHHTCEEEE--CSCCCH-HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHc---CCCEEEECCchhh-hHHHHHHHHhcCCEEEE--eecCCH-HHHHHHHHHHHcCCEEE
Confidence 4555444 4899999999864 45567777766765332 233344 45788899999998755
No 315
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=39.15 E-value=46 Score=31.29 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=42.7
Q ss_pred CCCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEE
Q 007327 7 FSKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFIN 84 (608)
Q Consensus 7 ~~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi 84 (608)
+..++++|+| |..|. +.+.+.+.|+. |..++ + . ++ . .. +.|++++
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~-------V~~~~-~--~--------~~-----------~-~~---~aD~vi~ 63 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHE-------VTYYG-S--K--------DQ-----------A-TT---LGEIVIM 63 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-T--T--------CC-----------C-SS---CCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCE-------EEEEc-C--C--------HH-----------H-hc---cCCEEEE
Confidence 4567899995 22233 67778777643 44554 2 1 12 1 22 4799999
Q ss_pred eccChhcHHHHHHHhcC-CCCCEEEEecCCCC
Q 007327 85 FSSFRSAAASSMAALKQ-PTIRVVAIIAEGVP 115 (608)
Q Consensus 85 ~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~ 115 (608)
+||+.. +.++++++.. ..=+.++-++.|++
T Consensus 64 av~~~~-~~~v~~~l~~~~~~~~vi~~~~g~~ 94 (209)
T 2raf_A 64 AVPYPA-LAALAKQYATQLKGKIVVDITNPLN 94 (209)
T ss_dssp CSCHHH-HHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred cCCcHH-HHHHHHHHHHhcCCCEEEEECCCCC
Confidence 999654 6777776642 12123444577776
No 316
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=38.66 E-value=26 Score=32.93 Aligned_cols=52 Identities=15% Similarity=0.151 Sum_probs=37.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEe-cCCc--cHHHHHHHHHhCCCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E-~g~~--~~~~f~~~~r~a~~~KPVvvlk~Grs~~ 263 (608)
+...|.++..|+..+.|.||+- ||.. .+....+.+++. ++||+++-.|...+
T Consensus 43 i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~~~I~~~i~~~--~~pV~~~v~g~AaS 97 (193)
T 1yg6_A 43 IVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFI--KPDVSTICMGQAAS 97 (193)
T ss_dssp HHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHS--SSCEEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhc--CCCEEEEEeeeHHH
Confidence 3445667777888999999999 3332 356677777774 58999998776543
No 317
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=38.40 E-value=58 Score=27.87 Aligned_cols=81 Identities=10% Similarity=0.071 Sum_probs=54.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|.-.......+...+.+. .|+..+... .+..+.++++.+.+ ..+|++-++....++.++++.+++.
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~-~~~~v~~~~-------~~~~~a~~~l~~~~-~dlii~D~~l~~~~g~~~~~~l~~~ 76 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERR-PGYAVVAEA-------ADAGEAYRLYRETT-PDIVVMDLTLPGPGGIEATRHIRQW 76 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTS-TTEEEEEEE-------SSHHHHHHHHHTTC-CSEEEECSCCSSSCHHHHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHhhC-CCcEEEEEe-------CCHHHHHHHHhcCC-CCEEEEecCCCCCCHHHHHHHHHHh
Confidence 46888888887777777666541 344432122 23457777776654 5777776664445788999999986
Q ss_pred CCCCCEEEEE
Q 007327 248 KVNKPVVAWV 257 (608)
Q Consensus 248 ~~~KPVvvlk 257 (608)
....|||++-
T Consensus 77 ~~~~~ii~ls 86 (153)
T 3cz5_A 77 DGAARILIFT 86 (153)
T ss_dssp CTTCCEEEEE
T ss_pred CCCCeEEEEE
Confidence 6678998873
No 318
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=38.35 E-value=1.6e+02 Score=23.98 Aligned_cols=121 Identities=10% Similarity=0.049 Sum_probs=78.5
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcC------CCccEEEEEEecCCccHHHHH
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI------PQVKMMVVLGELGGRDEYSLV 241 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D------p~T~~I~ly~E~g~~~~~~f~ 241 (608)
.+|-+|...-.....+...+.+.|..+. +.. --+..+.++++.+. ....+|++-++....++.+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~-v~~-------~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~ 74 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHE-VVT-------VRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVL 74 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCE-EEE-------ECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCce-EEE-------ECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHH
Confidence 4678888888888888887876554322 222 23456888888862 456777776664445788999
Q ss_pred HHHHhCC--CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 242 EALKQGK--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 242 ~~~r~a~--~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
+.+|+.. ...|||++-..... .....++ ++|+. ..-+.++|...++.+..
T Consensus 75 ~~l~~~~~~~~~pii~ls~~~~~-----------------------~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTSINE-----------------------DDIFHSY-DLHVNCYITKSANLSQLFQIVKGIEE 130 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESCCCH-----------------------HHHHHHH-HTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHcCcccccccEEEEecCCcH-----------------------HHHHHHH-HhchhheecCCCCHHHHHHHHHHHHH
Confidence 9999864 56799888321111 2222333 45653 34588999999888887
Q ss_pred HHHhc
Q 007327 316 KLVEE 320 (608)
Q Consensus 316 ~~~~~ 320 (608)
.....
T Consensus 131 ~~~~~ 135 (140)
T 1k68_A 131 FWLST 135 (140)
T ss_dssp HHHTT
T ss_pred HHccc
Confidence 66544
No 319
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=38.12 E-value=91 Score=26.02 Aligned_cols=114 Identities=9% Similarity=0.158 Sum_probs=72.9
Q ss_pred CcEEEEecChhHHHHHHHHHHh-cCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CccHHHHHHHHH
Q 007327 168 GSVGFVSKSGGMSNELYNTIAR-VTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALK 245 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~-~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g-~~~~~~f~~~~r 245 (608)
-+|-+|...-.....+...+.+ .|+-+. .. .+..+.++++.+.....+|++-+... ..++-++++.+|
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~~~~v~---~~-------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~ 74 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIGEYDFI---EV-------ENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIR 74 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCCCEEE---EE-------CSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhccCccEE---EE-------CCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHH
Confidence 4688888888888888777776 555332 22 23457777777635566777666533 446789999999
Q ss_pred h--CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 246 Q--GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 246 ~--a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
+ .....|||++-.-... ..... +.++|+. ..-+.++|...++.++.
T Consensus 75 ~~~~~~~~~ii~ls~~~~~-----------------------~~~~~-~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 126 (140)
T 3lua_A 75 NNSRTANTPVIIATKSDNP-----------------------GYRHA-ALKFKVSDYILKPYPTKRLENSVRSVLK 126 (140)
T ss_dssp HSGGGTTCCEEEEESCCCH-----------------------HHHHH-HHHSCCSEEEESSCCTTHHHHHHHHHHC
T ss_pred hCcccCCCCEEEEeCCCCH-----------------------HHHHH-HHHcCCCEEEECCCCHHHHHHHHHHHHH
Confidence 8 5578899988321111 22222 3356643 34578888888877665
No 320
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=38.04 E-value=42 Score=32.88 Aligned_cols=116 Identities=11% Similarity=0.072 Sum_probs=67.6
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|+++.- |.+|..+...+.+++--+..++..-++...++...+=++-+. +++ + .++ +..|....+.++ ..
T Consensus 5 kI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~D--V---vID--ft~p~a~~~~~~-l~ 74 (243)
T 3qy9_A 5 KILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GAD--V---AID--FSNPNLLFPLLD-ED 74 (243)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCS--E---EEE--CSCHHHHHHHHT-SC
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCC--E---EEE--eCChHHHHHHHH-Hh
Confidence 5888888 999999998887765344444443222100111111111122 333 3 345 667888888777 77
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETF 314 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~ 314 (608)
.+||+|+-.+|-++.- -+..+++.++.+++...|+.==..+...+.
T Consensus 75 ~g~~vVigTTG~s~e~--------------------~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~ 120 (243)
T 3qy9_A 75 FHLPLVVATTGEKEKL--------------------LNKLDELSQNMPVFFSANMSYGVHALTKIL 120 (243)
T ss_dssp CCCCEEECCCSSHHHH--------------------HHHHHHHTTTSEEEECSSCCHHHHHHHHHH
T ss_pred cCCceEeCCCCCCHHH--------------------HHHHHHHHhcCCEEEECCccHHHHHHHHHH
Confidence 8999997655543321 145667778889988888765444444433
No 321
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=37.82 E-value=22 Score=36.62 Aligned_cols=60 Identities=10% Similarity=0.029 Sum_probs=37.6
Q ss_pred cccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCC-CCHHHHHHHHHHHHhC
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG-VPEADTKQLIAYARSN 129 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~G-f~e~~~~~l~~~a~~~ 129 (608)
..|.+++++. ++|++|+++|.........++|-++|.. +|+-... ++ ..-++|.+.|+++
T Consensus 56 ~~~~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGKh-VVtaNkkpla-~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 56 LLRAEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGIP-LITANKALLA-EAWESLRPFAEEG 116 (332)
T ss_dssp GEESSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTCC-EEECCHHHHH-HSHHHHHHHHHTT
T ss_pred cccCCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCCe-EEECCchhHH-HHHHHHHHHHHhC
Confidence 4677888765 3899999999763233444444447865 3331111 11 2457899999988
No 322
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=37.68 E-value=32 Score=31.97 Aligned_cols=46 Identities=17% Similarity=0.115 Sum_probs=29.7
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCCC
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGVP 115 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf~ 115 (608)
+.++.++.. +.|++++++|+.. ...+++++.. ..-+.++-+++|+.
T Consensus 55 ~~~~~~~~~---~~D~Vi~~~~~~~-~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 55 GMKNEDAAE---ACDIAVLTIPWEH-AIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp EEEHHHHHH---HCSEEEECSCHHH-HHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred hhhHHHHHh---cCCEEEEeCChhh-HHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 457777655 3799999999865 5667665542 11234555677776
No 323
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=37.41 E-value=23 Score=37.25 Aligned_cols=69 Identities=7% Similarity=0.053 Sum_probs=47.7
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC-CH-------HHHHHHHHHHHhCCCe-EEcC
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV-PE-------ADTKQLIAYARSNNKV-VIGP 136 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf-~e-------~~~~~l~~~a~~~g~r-vlGP 136 (608)
+.++.++.... ++|++|.+.|+.. ...++++|.+.|++.+. ++++ +. ..+.++.+.|++.|+. +.|+
T Consensus 65 ~~~l~~~l~~~-~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD--~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 65 IEELVALINEV-KPQIVLNIALPYQ-DLTIMEACLRTGVPYLD--TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp HHHHHHHHHHH-CCSEEEECSCGGG-HHHHHHHHHHHTCCEEE--SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHhh-CCCEEEECCCccc-ChHHHHHHHHhCCCEEE--ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 45666665532 3799999988864 56788888889998544 3332 11 2456889999999987 6777
Q ss_pred Cc
Q 007327 137 AT 138 (608)
Q Consensus 137 Nc 138 (608)
+|
T Consensus 141 G~ 142 (405)
T 4ina_A 141 GF 142 (405)
T ss_dssp BT
T ss_pred CC
Confidence 54
No 324
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=37.37 E-value=1e+02 Score=25.79 Aligned_cols=121 Identities=12% Similarity=-0.019 Sum_probs=72.3
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|.-.-.....+...+.+.+ |+..+-.. -+..+.++.+.+.+ ..+|++-++....++.++++.+++
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~~-~~~~v~~~-------~~~~~al~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~ 79 (143)
T 2qv0_A 9 KMKVIIVEDEFLAQQELSWLINTHS-QMEIVGSF-------DDGLDVLKFLQHNK-VDAIFLDINIPSLDGVLLAQNISQ 79 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHS-CCEEEEEE-------SCHHHHHHHHHHCC-CSEEEECSSCSSSCHHHHHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHhCC-CceEEEEe-------CCHHHHHHHHHhCC-CCEEEEecCCCCCCHHHHHHHHHc
Confidence 3468889888888777777776642 33322122 23457777777654 567776665334578899999887
Q ss_pred CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHHHHhcCC
Q 007327 247 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEKLVEEGK 322 (608)
Q Consensus 247 a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~~~~~G~ 322 (608)
.....|||++ ++..+ ... .++ ++|+. ..-+.++|...++.+...+.....
T Consensus 80 ~~~~~~ii~~-s~~~~-----------------------~~~-~~~-~~g~~~~l~KP~~~~~l~~~i~~~~~~~~~~~~ 133 (143)
T 2qv0_A 80 FAHKPFIVFI-TAWKE-----------------------HAV-EAF-ELEAFDYILKPYQESRIINMLQKLTTAWEQQNN 133 (143)
T ss_dssp STTCCEEEEE-ESCCT-----------------------THH-HHH-HTTCSEEEESSCCHHHHHHHHHHHHHHHHHC--
T ss_pred cCCCceEEEE-eCCHH-----------------------HHH-HHH-hCCcceEEeCCCCHHHHHHHHHHHHHHHHhccc
Confidence 5444456665 22211 111 222 45543 345788999999888877655544
No 325
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=37.31 E-value=6.8 Score=38.96 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=57.1
Q ss_pred CCCCcEEEEEcCCc--h-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEE
Q 007327 7 FSKTTQALFYNYKQ--L-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFI 83 (608)
Q Consensus 7 ~~p~s~avv~g~~~--~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlav 83 (608)
++.++++|+| +++ + +.+.|.+.|+ .|..++ .... +...+. +-.|+..+.++.++.. +.|++|
T Consensus 127 ~~~~~v~iiG-aG~~g~aia~~L~~~g~-------~V~v~~-r~~~-~~~~l~--~~~g~~~~~~~~~~~~---~aDiVi 191 (275)
T 2hk9_A 127 VKEKSILVLG-AGGASRAVIYALVKEGA-------KVFLWN-RTKE-KAIKLA--QKFPLEVVNSPEEVID---KVQVIV 191 (275)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHHTC-------EEEEEC-SSHH-HHHHHT--TTSCEEECSCGGGTGG---GCSEEE
T ss_pred cCCCEEEEEC-chHHHHHHHHHHHHcCC-------EEEEEE-CCHH-HHHHHH--HHcCCeeehhHHhhhc---CCCEEE
Confidence 3456778784 432 2 7778887753 355666 4221 001110 1124566667777654 479999
Q ss_pred EeccChhcH--HHHHH-HhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 84 NFSSFRSAA--ASSMA-ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 84 i~vp~~~~~--~~~le-~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
+++|..... ...++ ++-+.| .+++.-.. ...++.+.+++.|.+++
T Consensus 192 ~atp~~~~~~~~~~i~~~~l~~g---~~viDv~~---~~t~ll~~a~~~g~~~v 239 (275)
T 2hk9_A 192 NTTSVGLKDEDPEIFNYDLIKKD---HVVVDIIY---KETKLLKKAKEKGAKLL 239 (275)
T ss_dssp ECSSTTSSTTCCCSSCGGGCCTT---SEEEESSS---SCCHHHHHHHHTTCEEE
T ss_pred EeCCCCCCCCCCCCCCHHHcCCC---CEEEEcCC---ChHHHHHHHHHCcCEEE
Confidence 999987421 01121 122222 23333333 23456777888888876
No 326
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=37.25 E-value=75 Score=27.20 Aligned_cols=59 Identities=12% Similarity=0.019 Sum_probs=42.6
Q ss_pred CccEEEEeccChh-------cHHHHHHHhcC--CCCCEEEEecCCCC-HHHHHHHHHHHHhCCCeEEcC
Q 007327 78 MADVFINFSSFRS-------AAASSMAALKQ--PTIRVVAIIAEGVP-EADTKQLIAYARSNNKVVIGP 136 (608)
Q Consensus 78 ~vDlavi~vp~~~-------~~~~~le~~~~--~gv~~~viis~Gf~-e~~~~~l~~~a~~~g~rvlGP 136 (608)
+.|++++..|-.. .....++.+.. +|.+.+++.|.|.. ....+++.+..++.|.+++|+
T Consensus 45 ~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~ 113 (138)
T 5nul_A 45 NEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVET 113 (138)
T ss_dssp TCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSC
T ss_pred hCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECC
Confidence 3699999888421 25567777653 57777777676654 446788888999999999987
No 327
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=37.23 E-value=12 Score=37.25 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=25.5
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCC---EEEEecCCCCH
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIR---VVAIIAEGVPE 116 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~---~~viis~Gf~e 116 (608)
+.|+++++||+.. +.++++.+.. .++ .+|.++.|+..
T Consensus 83 ~~D~vil~vk~~~-~~~v~~~i~~-~l~~~~~iv~~~nG~~~ 122 (317)
T 2qyt_A 83 TVDYILFCTKDYD-MERGVAEIRP-MIGQNTKILPLLNGADI 122 (317)
T ss_dssp CEEEEEECCSSSC-HHHHHHHHGG-GEEEEEEEEECSCSSSH
T ss_pred CCCEEEEecCccc-HHHHHHHHHh-hcCCCCEEEEccCCCCc
Confidence 4899999999986 6788887753 232 23344678754
No 328
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=37.08 E-value=1.2e+02 Score=27.84 Aligned_cols=83 Identities=11% Similarity=0.065 Sum_probs=58.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcC------------CCccEEEEEEecC
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI------------PQVKMMVVLGELG 233 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D------------p~T~~I~ly~E~g 233 (608)
.+-+|-+|--.-.+...+...+.+.| +..+.... +..+.++++.+. ....+|++-+...
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~g--~~~v~~a~-------~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp 130 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKMG--VSEVEQCD-------SGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMP 130 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTT--CSEEEEES-------SHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCS
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcC--CCeeeeeC-------CHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCC
Confidence 34579999999888888877787664 43333333 345778888763 3456777777655
Q ss_pred CccHHHHHHHHHhC----CCCCCEEEEE
Q 007327 234 GRDEYSLVEALKQG----KVNKPVVAWV 257 (608)
Q Consensus 234 ~~~~~~f~~~~r~a----~~~KPVvvlk 257 (608)
..++.++++.+|+. ....|||++-
T Consensus 131 ~~~G~el~~~lr~~~~~~~~~~piI~ls 158 (206)
T 3mm4_A 131 EMDGYEATREIRKVEKSYGVRTPIIAVS 158 (206)
T ss_dssp SSCHHHHHHHHHHHHHTTTCCCCEEEEE
T ss_pred CCCHHHHHHHHHhhhhhcCCCCcEEEEE
Confidence 56899999999874 3567888883
No 329
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=36.99 E-value=53 Score=35.06 Aligned_cols=60 Identities=17% Similarity=0.181 Sum_probs=36.6
Q ss_pred CHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 68 TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++.++.. ++|++|.++|... ...+.++|.+.|+. ++.. +-+.+ ...++.+.|++.|++++
T Consensus 61 ~l~~~l~---~~DvVIn~a~~~~-~~~i~~a~l~~g~~-vvd~-~~~~~-~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 61 ALDAEVA---KHDLVISLIPYTF-HATVIKSAIRQKKH-VVTT-SYVSP-AMMELDQAAKDAGITVM 120 (450)
T ss_dssp HHHHHHT---TSSEEEECCC--C-HHHHHHHHHHHTCE-EEES-SCCCH-HHHHTHHHHHHTTCEEE
T ss_pred HHHHHHc---CCcEEEECCcccc-chHHHHHHHhCCCe-EEEe-ecccH-HHHHHHHHHHHCCCeEE
Confidence 4545443 4899999998754 34455666555543 3332 22232 46788999999999855
No 330
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=36.71 E-value=1.2e+02 Score=25.04 Aligned_cols=117 Identities=8% Similarity=0.005 Sum_probs=74.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
=+|-+|.........+...+.+.+.-+ .. -.+..+.++.+.+. ...+|++-++..-.++.++++.+|+.
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~~~~v---~~-------~~~~~~a~~~l~~~-~~dlvi~d~~l~~~~g~~~~~~l~~~ 76 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISNHFPEV---WS-------AGDGEEGERLFGLH-APDVIITDIRMPKLGGLEMLDRIKAG 76 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTCSCE---EE-------ESSHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHHT
T ss_pred cEEEEEeCCHHHHHHHHHHHHhcCcEE---EE-------ECCHHHHHHHHhcc-CCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 368899999888888877777633221 11 22455777777654 34667666664456789999999986
Q ss_pred CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHHHHh
Q 007327 248 KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEKLVE 319 (608)
Q Consensus 248 ~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~~~~ 319 (608)
....|||++- +... . ..... +.++|+ ...-+.++|...++.+.+....
T Consensus 77 ~~~~~ii~~s-~~~~------------------~----~~~~~-~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~~ 128 (137)
T 3hdg_A 77 GAKPYVIVIS-AFSE------------------M----KYFIK-AIELGVHLFLPKPIEPGRLMETLEDFRHIKLA 128 (137)
T ss_dssp TCCCEEEECC-CCCC------------------H----HHHHH-HHHHCCSEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEe-cCcC------------------h----HHHHH-HHhCCcceeEcCCCCHHHHHHHHHHHHHHHhc
Confidence 6677877762 1111 1 22223 345664 3345899999999888875433
No 331
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=36.03 E-value=72 Score=33.07 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=33.9
Q ss_pred HHHHHhcCCCCCEEEEecC-CCCHHHHHHHHHHHHhCCCeEEcCCccccc
Q 007327 94 SSMAALKQPTIRVVAIIAE-GVPEADTKQLIAYARSNNKVVIGPATVGGI 142 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~-Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~ 142 (608)
..++.+.++||+.+|..+. |... +...++++|+++|+.++- +.|++
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~g~gr-~~~~l~~la~~~gv~i~~--~tG~y 136 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCRGIGR-DPVKLRRISAETGVQVVM--GAGYY 136 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCBTTTC-CHHHHHHHHHHHCCEEEE--CCSBC
T ss_pred HHHHHHHhcCCCeEEEeCCCcccC-CHHHHHHHHHHhCCcEEE--EeCcc
Confidence 5667778899999999874 4433 668889999999987752 34554
No 332
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=35.80 E-value=1e+02 Score=30.49 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=29.1
Q ss_pred cCCHHHHhhcCCCccEEEEeccChh-----------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~-----------------~~~~~le~~~~~gv~~~viis~ 112 (608)
..++.++.... ++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 87 ~~~~~~~~~~~-~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 87 GELLEHVIKER-DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHHHH-TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHHHHhhc-CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 34455555432 3798876543211 0246788998899998888875
No 333
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=35.74 E-value=76 Score=27.86 Aligned_cols=37 Identities=14% Similarity=-0.008 Sum_probs=26.0
Q ss_pred CccEEEEeccChhcHHHHHHHhcC-CCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQ-PTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~-~gv~~~viis~Gf 114 (608)
+.|++|++++.......+.+.+.. .+...++..+.+-
T Consensus 84 ~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 84 KADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSG
T ss_pred cCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 379999999987655566666664 5677777766554
No 334
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=35.46 E-value=1.1e+02 Score=25.34 Aligned_cols=114 Identities=10% Similarity=0.032 Sum_probs=66.2
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-++...-.....+...+...| ++..+.... +..+.++++.+. ...+|++-++....++-++++.+|+..
T Consensus 5 ~Ilivdd~~~~~~~l~~~l~~~~-~~~~v~~~~-------~~~~al~~~~~~-~~dlvilD~~lp~~~g~~~~~~l~~~~ 75 (133)
T 3b2n_A 5 SLIIAEDQNMLRQAMVQLIKLHG-DFEILADTD-------NGLDAMKLIEEY-NPNVVILDIEMPGMTGLEVLAEIRKKH 75 (133)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHS-SEEEEEEES-------CHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHHTT
T ss_pred EEEEECCCHHHHHHHHHHHhhCC-CcEEEEEcC-------CHHHHHHHHhhc-CCCEEEEecCCCCCCHHHHHHHHHHHC
Confidence 35666666666666666666554 333333322 235777777553 235666665533457889999999855
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
...|||++-. .... .....++ ++|+. ..-+.++|...++.+..
T Consensus 76 ~~~~ii~ls~-~~~~----------------------~~~~~~~-~~ga~~~l~Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 76 LNIKVIIVTT-FKRP----------------------GYFEKAV-VNDVDAYVLKERSIEELVETINKVNN 122 (133)
T ss_dssp CSCEEEEEES-CCCH----------------------HHHHHHH-HTTCSEEEETTSCHHHHHHHHHHHHC
T ss_pred CCCcEEEEec-CCCH----------------------HHHHHHH-HcCCcEEEECCCCHHHHHHHHHHHHc
Confidence 6778888731 1110 2223333 46653 34578888888776654
No 335
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=35.46 E-value=83 Score=26.49 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=72.8
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcC-CceeEEeecCCCCCCCCCHHHHHHHhhcC-CCccEEEEEEecCCccHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVT-DGIYEGIAIGGDVFPGSTLSDHILRFNNI-PQVKMMVVLGELGGRDEYSLVEA 243 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g-~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D-p~T~~I~ly~E~g~~~~~~f~~~ 243 (608)
...+|-+|...-.....+...+.+.| +-+.. ..+. .+.+..+.+. ....+|++-+.....++-++++.
T Consensus 19 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~---~~~~-------~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 88 (146)
T 4dad_A 19 GMINILVASEDASRLAHLARLVGDAGRYRVTR---TVGR-------AAQIVQRTDGLDAFDILMIDGAALDTAELAAIEK 88 (146)
T ss_dssp GGCEEEEECSCHHHHHHHHHHHHHHCSCEEEE---ECCC-------HHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEE---eCCH-------HHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHH
Confidence 56689999999998888888888766 43322 2222 2445555443 45567777766444567889999
Q ss_pred HHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 244 LKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 244 ~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
+|+.....|||++-. .... .....+ .++|+ ...-+.++|...++.++.
T Consensus 89 l~~~~~~~~ii~lt~-~~~~----------------------~~~~~~-~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 89 LSRLHPGLTCLLVTT-DASS----------------------QTLLDA-MRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHCTTCEEEEEES-CCCH----------------------HHHHHH-HTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEeC-CCCH----------------------HHHHHH-HHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 988666778888732 1111 222222 35664 334578888888877665
No 336
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=35.16 E-value=65 Score=32.07 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=16.2
Q ss_pred CCCCcEEEEEcCCch----HHHHHhhCccc
Q 007327 7 FSKTTQALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 7 ~~p~s~avv~g~~~~----~~~~l~~~~~~ 32 (608)
++++++.|. |++|. +++.|++.||.
T Consensus 23 ~~~~~vlVt-GatG~iG~~l~~~L~~~g~~ 51 (351)
T 3ruf_A 23 FSPKTWLIT-GVAGFIGSNLLEKLLKLNQV 51 (351)
T ss_dssp HSCCEEEEE-TTTSHHHHHHHHHHHHTTCE
T ss_pred CCCCeEEEE-CCCcHHHHHHHHHHHHCCCE
Confidence 345667767 44433 88888888753
No 337
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=35.07 E-value=35 Score=34.91 Aligned_cols=147 Identities=12% Similarity=0.004 Sum_probs=79.6
Q ss_pred CHHHHhhcCCCccEEEEeccChhc----HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccc
Q 007327 68 TVEAACAAHPMADVFINFSSFRSA----AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQ 143 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~~~----~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~ 143 (608)
+..++... +++|++|.++|.... .+.+.+++ ++|.. +|.-.-+.-...-++|.+.|+++|.++.=.-+.|--.
T Consensus 73 d~~e~l~~-~~iDvVVe~T~~~~~~~pa~~~~~~aL-~aGkh-VVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~gi 149 (325)
T 3ing_A 73 SGPEDLMG-EAADLLVDCTPASRDGVREYSLYRMAF-ESGMN-VVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGV 149 (325)
T ss_dssp CSGGGGTT-SCCSEEEECCCCCSSSHHHHHHHHHHH-HTTCE-EEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTS
T ss_pred CHHHHhcC-CCCCEEEECCCCccccchHHHHHHHHH-HCCCe-EEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccC
Confidence 55666554 369999999997422 23444444 47775 3322222111356789999999999865333333222
Q ss_pred cCcccccccCCcccccccccCCCCCcEEEEe--cChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCC
Q 007327 144 AGAFKIGDTAGTIDNIIHCKLYRPGSVGFVS--KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIP 221 (608)
Q Consensus 144 ~~~~~l~~~~~~~~~~~p~~~~~~G~valvS--QSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp 221 (608)
|-...+ . .....+.|.=|. -||+..+-+ ... +.|..|+.+ +..+.-+-|-+.||
T Consensus 150 Pii~~l-----------~-~~l~g~~I~~i~Gi~nGT~nyil-~~m-~~g~~f~~~----------l~~Aq~~GyaE~DP 205 (325)
T 3ing_A 150 PLFSVL-----------D-YSILPSKVKRFRGIVSSTINYVI-RNM-ANGRSLRDV----------VDDAIKKGIAESNP 205 (325)
T ss_dssp CCHHHH-----------H-HTCTTCCEEEEEEECCHHHHHHH-HHH-HTTCCHHHH----------HHHHHHHTCSCSST
T ss_pred HHHHHH-----------H-HHhhCCCeeEEEEEEEeeeeEEe-ecc-cCCCCHHHH----------HHHHHHcCCCCCCc
Confidence 322011 0 012446676664 688876544 333 444444332 22233334566688
Q ss_pred CccEEEEEEecCCccHHHHHHHHHhC
Q 007327 222 QVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 222 ~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
.-. +| |..-.+|+.=.+|.+
T Consensus 206 ~~D-----v~-G~D~a~Kl~ILa~~~ 225 (325)
T 3ing_A 206 QDD-----LN-GLDAARKSVILVNHI 225 (325)
T ss_dssp HHH-----HT-THHHHHHHHHHHHHH
T ss_pred ccc-----cC-ChhHHHHHHHHHHHH
Confidence 754 35 666667776666664
No 338
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=35.02 E-value=55 Score=32.70 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=18.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEe
Q 007327 210 LSDHILRFNNIPQVKMMVVLGE 231 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E 231 (608)
+.+.++.+.+||++|+|++..+
T Consensus 40 L~~al~~~~~d~~vr~vVltg~ 61 (287)
T 3gkb_A 40 LRTVLTTLADDSSVRVIVFSSA 61 (287)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES
T ss_pred HHHHHHHHHcCCCeeEEEEecC
Confidence 4567778888999999999887
No 339
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=34.96 E-value=60 Score=33.20 Aligned_cols=35 Identities=6% Similarity=-0.123 Sum_probs=24.3
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.|+|... .....+.+.++|++ +|..|+-|
T Consensus 65 ~vDvVf~a~g~~~-s~~~a~~~~~~G~~-vId~s~~~ 99 (336)
T 2r00_A 65 QVHIALFSAGGEL-SAKWAPIAAEAGVV-VIDNTSHF 99 (336)
T ss_dssp GCSEEEECSCHHH-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred CCCEEEECCCchH-HHHHHHHHHHcCCE-EEEcCCcc
Confidence 3899999998864 44555666668885 55556655
No 340
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=34.94 E-value=44 Score=33.16 Aligned_cols=54 Identities=24% Similarity=0.378 Sum_probs=35.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c---c------------H---HHH----HHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R---D------------E---YSL----VEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~---~------------~---~~f----~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- . | . ..| .+..++.. ..||||+..-|..-.|
T Consensus 49 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 127 (279)
T 3g64_A 49 LRDLLAELSRRRAVRALVLAGE-GRGFCSGGDVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGA 127 (279)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEC-SSCSBCCBCTTTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceecCcCHHHHhhccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeccc
Confidence 4577888889999999999988 51 0 1 0 012 22223332 6899999988876543
No 341
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=34.94 E-value=55 Score=33.68 Aligned_cols=35 Identities=9% Similarity=-0.086 Sum_probs=23.6
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.++|... .....+.+.++|++ +|=.++-|
T Consensus 83 ~~DvV~~atp~~~-~~~~a~~~~~aG~~-VId~s~~~ 117 (354)
T 1ys4_A 83 DVDIVFSALPSDL-AKKFEPEFAKEGKL-IFSNASAY 117 (354)
T ss_dssp TCCEEEECCCHHH-HHHHHHHHHHTTCE-EEECCSTT
T ss_pred CCCEEEECCCchH-HHHHHHHHHHCCCE-EEECCchh
Confidence 3899999999865 45566666668887 33334433
No 342
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=34.69 E-value=1.8e+02 Score=24.04 Aligned_cols=81 Identities=15% Similarity=0.098 Sum_probs=54.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcC----CCccEEEEEEecCCccHHHHHHH
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI----PQVKMMVVLGELGGRDEYSLVEA 243 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D----p~T~~I~ly~E~g~~~~~~f~~~ 243 (608)
-+|-+|.........+...+.+.|... .+... -+..+.++++.+. ....+|++-++....++-++++.
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~~~-~v~~~-------~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~ 81 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHRVE-EIQSV-------TSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDL 81 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCCEE-EEEEE-------SSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCCCe-eeeec-------CCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHH
Confidence 468889888887777777776655421 22221 2345777777752 44567777776555688999999
Q ss_pred HHh----CCCCCCEEEE
Q 007327 244 LKQ----GKVNKPVVAW 256 (608)
Q Consensus 244 ~r~----a~~~KPVvvl 256 (608)
+|+ .....|||++
T Consensus 82 l~~~~~~~~~~~~ii~~ 98 (146)
T 3ilh_A 82 FKQHFQPMKNKSIVCLL 98 (146)
T ss_dssp HHHHCGGGTTTCEEEEE
T ss_pred HHHhhhhccCCCeEEEE
Confidence 998 4467788777
No 343
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=34.61 E-value=1.3e+02 Score=29.85 Aligned_cols=43 Identities=14% Similarity=0.116 Sum_probs=28.5
Q ss_pred cCCHHHHhhcCCCccEEEEeccCh--hcHHHHHHHhcCCC-CCEEEE
Q 007327 66 HSTVEAACAAHPMADVFINFSSFR--SAAASSMAALKQPT-IRVVAI 109 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~--~~~~~~le~~~~~g-v~~~vi 109 (608)
..++.++.... ++|.+|.+.+.. .....++++|.+.| ++.+|.
T Consensus 72 ~~~l~~~~~~~-~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEH-EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHT-TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhC-CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 44555555533 389988766542 22457889998888 998774
No 344
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=34.47 E-value=59 Score=30.48 Aligned_cols=91 Identities=9% Similarity=0.097 Sum_probs=49.1
Q ss_pred CCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEe-CCCCCCcccccc--Cc-ee--ecccccCCHHHHhhc
Q 007327 6 LFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGII-NPGAEGFQKLFF--GQ-EE--IAIPVHSTVEAACAA 75 (608)
Q Consensus 6 l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~-~p~~~~~~~~~~--g~-ev--~G~~~y~sv~~i~~~ 75 (608)
-|+.+++.|. |++|. +++.|++.|+. |.++. .+.+. ..+. +- ++ ..+. .++.+...
T Consensus 18 ~l~~~~ilVt-GatG~iG~~l~~~L~~~G~~-------V~~~~R~~~~~---~~~~~~~~~~~~~~Dl~--~~~~~~~~- 83 (236)
T 3e8x_A 18 YFQGMRVLVV-GANGKVARYLLSELKNKGHE-------PVAMVRNEEQG---PELRERGASDIVVANLE--EDFSHAFA- 83 (236)
T ss_dssp ---CCEEEEE-TTTSHHHHHHHHHHHHTTCE-------EEEEESSGGGH---HHHHHTTCSEEEECCTT--SCCGGGGT-
T ss_pred CcCCCeEEEE-CCCChHHHHHHHHHHhCCCe-------EEEEECChHHH---HHHHhCCCceEEEcccH--HHHHHHHc-
Confidence 3566677777 44433 88888888754 44444 12111 0000 10 10 1122 45555443
Q ss_pred CCCccEEEEeccChh-------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 76 HPMADVFINFSSFRS-------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 76 ~p~vDlavi~vp~~~-------------~~~~~le~~~~~gv~~~viis~ 112 (608)
++|.+|.+..... ....++++|.+.|++.+|.+|+
T Consensus 84 --~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 131 (236)
T 3e8x_A 84 --SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSS 131 (236)
T ss_dssp --TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECC
T ss_pred --CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEec
Confidence 4899887665421 1346788888889998888876
No 345
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=34.35 E-value=2.6e+02 Score=27.75 Aligned_cols=117 Identities=15% Similarity=0.169 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC-------hhHHHHHH
Q 007327 112 EGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS-------GGMSNELY 184 (608)
Q Consensus 112 ~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS-------G~l~~~~~ 184 (608)
.+++|...+++.+.+++.|-+ .||... . .|. .-+.+.||+|..+ ..+...++
T Consensus 34 ~~Vs~~tr~rV~~~a~~lgY~--~pn~~a-----~-~l~-------------~~~s~~Igvi~~~~~~~~~~~~~~~~~~ 92 (366)
T 3h5t_A 34 EQLSAELRQRILDTAEDMGYL--GPDPVA-----R-SLR-------------TRRAGAIGVLLTEDLTYAFEDMASVDFL 92 (366)
T ss_dssp GGSCHHHHHHHHHHHHHTTC-----------------------------------CCEEEEEESSCTTHHHHSHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCHHH-----H-Hhh-------------cCCCCEEEEEecCCccccccCHHHHHHH
Confidence 367888999999999997753 244321 0 110 0134568887654 12223343
Q ss_pred HHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 185 NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 185 ~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
..+.+.--|+...+...+... +-...++++.+.+. .+..|++. +......+++.+++ .+.|||++
T Consensus 93 ~gi~~~a~g~~~~~~~~~~~~-~~~~~~~~~~l~~~-~vdGiIi~---~~~~~~~~~~~l~~--~~iPvV~i 157 (366)
T 3h5t_A 93 AGVAQAAGDTQLTLIPASPAS-SVDHVSAQQLVNNA-AVDGVVIY---SVAKGDPHIDAIRA--RGLPAVIA 157 (366)
T ss_dssp HHHHHHSSSCEEEEEECCCCT-TCCHHHHHHHHHTC-CCSCEEEE---SCCTTCHHHHHHHH--HTCCEEEE
T ss_pred HHHHHHHhhCCEEEEEcCCCc-cHHHHHHHHHHHhC-CCCEEEEe---cCCCChHHHHHHHH--CCCCEEEE
Confidence 333322115554443333220 23577888877654 67777776 23322344555544 47899987
No 346
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=34.24 E-value=68 Score=31.56 Aligned_cols=16 Identities=25% Similarity=0.534 Sum_probs=12.8
Q ss_pred CCCCEEEEEeCCCccC
Q 007327 249 VNKPVVAWVSGTCARL 264 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g 264 (608)
..||||+..-|..-.|
T Consensus 98 ~~kPvIAav~G~a~Gg 113 (266)
T 3fdu_A 98 LSKPLIIAVKGVAIGI 113 (266)
T ss_dssp CCSCEEEEECSEEETH
T ss_pred CCCCEEEEECCEEehH
Confidence 6899999998876543
No 347
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=34.09 E-value=2e+02 Score=23.84 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=76.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecC-CccHHHHHHHHHh
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELG-GRDEYSLVEALKQ 246 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g-~~~~~~f~~~~r~ 246 (608)
-+|-+|...-.....+...+.+.|+-+ +.. .+..+.++.+.+.....+|++-++.. ..++.++++.+|+
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~ 75 (140)
T 3h5i_A 6 KKILIVEDSKFQAKTIANILNKYGYTV---EIA-------LTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQ 75 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------SSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCCEE---EEe-------cChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHh
Confidence 468888888888888888887765432 222 24568888887755667888777632 3678999999987
Q ss_pred CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcC----CcccCCHHHHHHHHHHHHHHHHhc
Q 007327 247 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAG----AVVPTSYEAFESAIKETFEKLVEE 320 (608)
Q Consensus 247 a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaG----vi~v~~~~el~~~~~~~~~~~~~~ 320 (608)
. ...|||++-......- ...+ .++| +...-+.++|...++.++.+....
T Consensus 76 ~-~~~~ii~ls~~~~~~~--~~~~----------------------~~~g~~~~l~KP~~~~~l~~~i~~~l~~~~~~ 128 (140)
T 3h5i_A 76 I-SELPVVFLTAHTEPAV--VEKI----------------------RSVTAYGYVMKSATEQVLITIVEMALRLYEAN 128 (140)
T ss_dssp H-CCCCEEEEESSSSCCC--CGGG----------------------GGSCEEEEEETTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCEEEEECCCCHHH--HHHH----------------------HhCCCcEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 5 5789888854433321 1111 1223 223457888888888777655433
No 348
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=33.87 E-value=2.4e+02 Score=26.67 Aligned_cols=173 Identities=6% Similarity=0.032 Sum_probs=86.2
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhc-HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE--cCCccc--
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSA-AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATVG-- 140 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~-~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl--GPNc~G-- 140 (608)
...+.+...+.+ .++.+........ ....++.+.+.++.++|++.....+ +..+.+++.|+.++ +-..-+
T Consensus 32 ~~gi~~~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~----~~~~~l~~~~iPvV~~~~~~~~~~ 106 (292)
T 3k4h_A 32 IRGISSFAHVEG-YALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND----RIIQYLHEQNFPFVLIGKPYDRKD 106 (292)
T ss_dssp HHHHHHHHHHTT-CEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC----HHHHHHHHTTCCEEEESCCSSCTT
T ss_pred HHHHHHHHHHcC-CEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh----HHHHHHHHCCCCEEEECCCCCCCC
Confidence 334445444443 6766543332211 1346677777899999987654432 45566777888755 322111
Q ss_pred ---ccccCcccccccCCcccccccccCCCCCcEEEEecChhHH------HHHHHHHHhcCCceeE-EeecCCCCCCCCCH
Q 007327 141 ---GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS------NELYNTIARVTDGIYE-GIAIGGDVFPGSTL 210 (608)
Q Consensus 141 ---i~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l~------~~~~~~~~~~g~G~s~-~vs~Gn~~~~dv~~ 210 (608)
.+..+....+ -.....+- .....+|++++-..... ..+.+.+.+.|+.+.. .+..++.. .+...
T Consensus 107 ~~~~V~~D~~~~g---~~a~~~L~--~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~-~~~~~ 180 (292)
T 3k4h_A 107 EITYVDNDNYTAA---REVAEYLI--SLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLADIVLPKEYILHFDFS-RESGQ 180 (292)
T ss_dssp TSCEEECCHHHHH---HHHHHHHH--HTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTTCCCCGGGEEECCSS-HHHHH
T ss_pred CCCEEEECcHHHH---HHHHHHHH--HCCCceEEEEeCcccchhHHHHHHHHHHHHHHcCCCCChheEEecCCC-HHHHH
Confidence 1111110000 00000000 12456899998543321 2244556667776532 12223221 02233
Q ss_pred HHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 211 SDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 211 ~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
..+-++|...|+..+|... +-.....+++++++...+.|
T Consensus 181 ~~~~~~l~~~~~~~ai~~~---~d~~a~g~~~al~~~g~~vP 219 (292)
T 3k4h_A 181 QAVEELMGLQQPPTAIMAT---DDLIGLGVLSALSKKGFVVP 219 (292)
T ss_dssp HHHHHHHTSSSCCSEEEES---SHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHcCCCCCcEEEEc---ChHHHHHHHHHHHHhCCCCC
Confidence 4455677777888887654 22334567888888655444
No 349
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=33.87 E-value=1.2e+02 Score=32.29 Aligned_cols=150 Identities=13% Similarity=0.134 Sum_probs=84.7
Q ss_pred HHHHHhcCCCCCEEEEecCCCCHH---HHHHHHHHHHhC-----CCeEEcCCcccccccCccccc-ccCCcccccccccC
Q 007327 94 SSMAALKQPTIRVVAIIAEGVPEA---DTKQLIAYARSN-----NKVVIGPATVGGIQAGAFKIG-DTAGTIDNIIHCKL 164 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~Gf~e~---~~~~l~~~a~~~-----g~rvlGPNc~Gi~~~~~~~l~-~~~~~~~~~~p~~~ 164 (608)
++.+.+.....+.+.|+|+..+|. |.+.+.+.+++. |++|+--+|.|+--....+.. .+.+-+........
T Consensus 87 aI~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~~~~~~~pvi~v~tpgf~gs~~~G~~~a~~al~~~l~~~~~ 166 (458)
T 1mio_B 87 AVKNIFSLYNPDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQGIVNYLSENTG 166 (458)
T ss_dssp HHHHHHHHTCCSEEEEEECHHHHHHTCCHHHHHHHHHHTTCSCTTCEEEEECCCTTSSCHHHHHHHHHHHHHHHHCCCCS
T ss_pred HHHHHHHhcCCCEEEEECCcHHHHHhcCHHHHHHHHHHhcCCCCCCeEEEEECCCCcccHHHHHHHHHHHHHHHHccccC
Confidence 344444456788889999988887 566666666554 799999999988632210100 00010110111112
Q ss_pred CCCCcEEEEecC--hhHHHHHHHHHHhcCCceeEE-----------------eecCCCCCCCCCHHHHHHHhhcCCCccE
Q 007327 165 YRPGSVGFVSKS--GGMSNELYNTIARVTDGIYEG-----------------IAIGGDVFPGSTLSDHILRFNNIPQVKM 225 (608)
Q Consensus 165 ~~~G~valvSQS--G~l~~~~~~~~~~~g~G~s~~-----------------vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~ 225 (608)
..++.|-|+.-. .+=..++-..+.+.|+.+..+ ++.|+. ++.| +.+=++-++
T Consensus 167 ~~~~~VNilg~~~~~~d~~eik~lL~~~Gi~v~~l~d~s~~ld~~~~~~~~~~~~gg~-----~~~e----i~~~~~A~~ 237 (458)
T 1mio_B 167 AKNGKINVIPGFVGPADMREIKRLFEAMDIPYIMFPDTSGVLDGPTTGEYKMYPEGGT-----KIED----LKDTGNSDL 237 (458)
T ss_dssp CCCSCEEEECCSCCHHHHHHHHHHHHHHTCCEEESSCCTTTSSCCCCSSCCSSCSCSB-----CHHH----HHTTSSCSE
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEeccccccccCcccCccceeCCCCC-----cHHH----HHhhccCCE
Confidence 357789998644 222356777778778877652 333433 3444 456666666
Q ss_pred EEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 226 MVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 226 I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
-++.-. ..+...++.+++ +.+.|.+.+
T Consensus 238 niv~~~---~~~~~~A~~Le~-~~GiP~~~~ 264 (458)
T 1mio_B 238 TLSLGS---YASDLGAKTLEK-KCKVPFKTL 264 (458)
T ss_dssp EEEESH---HHHHHHHHHHHH-HSCCCEEEE
T ss_pred EEEEch---hhHHHHHHHHHH-HhCCCEEec
Confidence 555422 234556666654 357898775
No 350
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=33.84 E-value=1.2e+02 Score=29.90 Aligned_cols=114 Identities=7% Similarity=0.094 Sum_probs=44.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC--------hhHHHHH
Q 007327 112 EGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS--------GGMSNEL 183 (608)
Q Consensus 112 ~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS--------G~l~~~~ 183 (608)
.++++...+++.+.+++.|-+ ||... . .+ ..-+...||++..+ ..+...+
T Consensus 28 ~~vs~~tr~rV~~~a~~lgY~---pn~~a-----~-~l-------------~~~~~~~Igvi~~~~~~~~~~~~~~~~gi 85 (338)
T 3dbi_A 28 GYVSQETKDRVFQAVEESGYR---PNLLA-----R-NL-------------SAKSTQTLGLVVTNTLYHGIYFSELLFHA 85 (338)
T ss_dssp ------------------------------------------------------CCSEEEEEECTTTTSTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC---cCHHH-----H-Hh-------------hhCCCCEEEEEecCCcccChhHHHHHHHH
Confidence 356777788888888887654 44311 0 11 00134556666544 2334445
Q ss_pred HHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 184 YNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 184 ~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
-+.+.+.|.-+.. ...+.. .-...++++.+.+. .+..|++.-- . .+...+.+.+++ .+.|||++
T Consensus 86 ~~~a~~~g~~~~~--~~~~~~--~~~~~~~~~~l~~~-~vdgiIi~~~-~-~~~~~~~~~~~~--~~iPvV~~ 149 (338)
T 3dbi_A 86 ARMAEEKGRQLLL--ADGKHS--AEEERQAIQYLLDL-RCDAIMIYPR-F-LSVDEIDDIIDA--HSQPIMVL 149 (338)
T ss_dssp HHHHHHTTCEEEE--EECTTS--HHHHHHHHHHHHHT-TCSEEEECCS-S-SCHHHHHHHHHH--CSSCEEEE
T ss_pred HHHHHHCCCEEEE--EeCCCC--hHHHHHHHHHHHhC-CCCEEEEeCC-C-CChHHHHHHHHc--CCCCEEEE
Confidence 5566666655443 332222 22344567766653 6778877633 2 234556666655 46899887
No 351
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=33.79 E-value=34 Score=32.85 Aligned_cols=51 Identities=18% Similarity=0.267 Sum_probs=36.7
Q ss_pred HHHHHHhhcCCCccEEEEEEe-cCCc--cHHHHHHHHHhCCCCCCEEEEEeCCCcc
Q 007327 211 SDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPVVAWVSGTCAR 263 (608)
Q Consensus 211 ~d~l~~l~~Dp~T~~I~ly~E-~g~~--~~~~f~~~~r~a~~~KPVvvlk~Grs~~ 263 (608)
.+.|.++.+|+..|.|.||+. +|.. .+....+.+++ .+|||+++-.|....
T Consensus 63 ~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~--~~~pV~t~v~G~AaS 116 (218)
T 1y7o_A 63 IAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNF--IKADVQTIVMGMAAS 116 (218)
T ss_dssp HHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHH--SSSCEEEEEEEEEET
T ss_pred HHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHh--cCCCEEEEEccEeHH
Confidence 355667788999999999998 3322 35566777776 469999998775443
No 352
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=33.63 E-value=33 Score=33.93 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC------ccH-----------HHH----HHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG------RDE-----------YSL----VEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~------~~~-----------~~f----~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++..+ |- .|- ..| .+..++. ...||||+..-|..-.
T Consensus 44 L~~al~~~~~d~~vr~vVltg~-g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 118 (272)
T 1hzd_A 44 LSKAVDALKSDKKVRTIIIRSE-VPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALG 118 (272)
T ss_dssp HHHHHHHHHHCSSCSEEEEEES-BTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEET
T ss_pred HHHHHHHHHhCCCeEEEEEecC-CCCCCcCCCChhhhhccChHHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEEe
Confidence 4567777888999999999987 52 111 122 2223333 3689999998765544
No 353
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=33.36 E-value=21 Score=36.19 Aligned_cols=91 Identities=15% Similarity=0.044 Sum_probs=50.4
Q ss_pred CCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccc--cCc--------eeecccccCCHHHHhhcC
Q 007327 9 KTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLF--FGQ--------EEIAIPVHSTVEAACAAH 76 (608)
Q Consensus 9 p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~--~g~--------ev~G~~~y~sv~~i~~~~ 76 (608)
.++|+||| |.-|. +...|.+.|+. |..+. ... +.+.+ .|- ....+++..+.+++ .
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~-------V~~~~-r~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-- 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEA-------INVLA-RGA--TLQALQTAGLRLTEDGATHTLPVRATHDAAAL-G-- 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCC-------EEEEC-CHH--HHHHHHHTCEEEEETTEEEEECCEEESCHHHH-C--
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCE-------EEEEE-ChH--HHHHHHHCCCEEecCCCeEEEeeeEECCHHHc-C--
Confidence 47899995 22233 66677777643 44554 211 00000 111 11224456677764 3
Q ss_pred CCccEEEEeccChhcHHHHHHHhcCC-CC-CEEEEecCCC
Q 007327 77 PMADVFINFSSFRSAAASSMAALKQP-TI-RVVAIIAEGV 114 (608)
Q Consensus 77 p~vDlavi~vp~~~~~~~~le~~~~~-gv-~~~viis~Gf 114 (608)
+.|++|++||+.. +.++++.+... +- ..+|.++.|+
T Consensus 70 -~~D~Vilavk~~~-~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 -EQDVVIVAVKAPA-LESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp -CCSEEEECCCHHH-HHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred -CCCEEEEeCCchh-HHHHHHHHHhhCCCCCEEEEECCCC
Confidence 4899999999975 77888877632 11 2344456775
No 354
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=33.22 E-value=65 Score=31.39 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c-------------cHHH----HHHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R-------------DEYS----LVEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~-------------~~~~----f~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- . +..+ +.+..++. ...||||+..-|..-.|
T Consensus 32 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 105 (254)
T 3gow_A 32 LYAALKEGEEDREVRALLLTGA-GRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGA 105 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCcccCCCChHHHhhcchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4567777888999999998887 41 0 1111 22333333 37899999988876543
No 355
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=33.06 E-value=80 Score=25.65 Aligned_cols=57 Identities=19% Similarity=0.339 Sum_probs=39.4
Q ss_pred HHHHHHhCC-CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHH
Q 007327 240 LVEALKQGK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETF 314 (608)
Q Consensus 240 f~~~~r~a~-~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~ 314 (608)
....++... .+||+|++.-|.++-. -..|..-.++.|+ +...|++||...++.|+
T Consensus 40 irdiiksmkdngkplvvfvngasqnd--------------------vnefqneakkegvsydvlkstdpeeltqrvrefl 99 (112)
T 2lnd_A 40 IRDIIKSMKDNGKPLVVFVNGASQND--------------------VNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFL 99 (112)
T ss_dssp HHHHHHHHTTCCSCEEEEECSCCHHH--------------------HHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEecCccccc--------------------HHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHH
Confidence 333444444 7999999998877642 1344455566664 67899999999999888
Q ss_pred HH
Q 007327 315 EK 316 (608)
Q Consensus 315 ~~ 316 (608)
..
T Consensus 100 kt 101 (112)
T 2lnd_A 100 KT 101 (112)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 356
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=32.98 E-value=76 Score=31.71 Aligned_cols=52 Identities=19% Similarity=0.332 Sum_probs=32.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc------c--------------------HHHHHHHHHhCCCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR------D--------------------EYSLVEALKQGKVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~------~--------------------~~~f~~~~r~a~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++-.+ |-+ | ..++++.+++ ..||||+..-|..-.
T Consensus 60 L~~al~~~~~d~~vr~vVltg~-G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAaV~G~a~G 136 (289)
T 3t89_A 60 MIQALADARYDDNIGVIILTGA-GDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRT--CPKPVVAMVAGYSIG 136 (289)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSSEEECCBCCC----------------CTHHHHHHHHHH--CSSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCCCccCCCChhhhhccccchhhhHHHHHHHHHHHHHHHc--CCCCEEEEECCEeeh
Confidence 4466777777888888888877 521 1 0122222332 689999998777654
Q ss_pred C
Q 007327 264 L 264 (608)
Q Consensus 264 g 264 (608)
|
T Consensus 137 g 137 (289)
T 3t89_A 137 G 137 (289)
T ss_dssp H
T ss_pred H
Confidence 3
No 357
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=32.98 E-value=92 Score=25.04 Aligned_cols=79 Identities=8% Similarity=0.061 Sum_probs=49.4
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|...-.....+...+.+.| +..+.... +..+.++++.+. ...+|++-+.....++.++++.+++..
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g--~~vv~~~~-------~~~~a~~~~~~~-~~dlil~D~~l~~~~g~~~~~~l~~~~ 73 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAG--YEVAGEAT-------NGREAVEKYKEL-KPDIVTMDITMPEMNGIDAIKEIMKID 73 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CEEEEEES-------SHHHHHHHHHHH-CCSEEEEECSCGGGCHHHHHHHHHHHC
T ss_pred eEEEEcCcHHHHHHHHHHHhhcC--cEEEEEEC-------CHHHHHHHHHhc-CCCEEEEeCCCCCCcHHHHHHHHHhhC
Confidence 46777777767666666666544 43222222 234666766553 246676666533357889999998866
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 74 ~~~~ii~~s 82 (120)
T 1tmy_A 74 PNAKIIVCS 82 (120)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEe
Confidence 678888873
No 358
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=32.85 E-value=45 Score=34.49 Aligned_cols=92 Identities=14% Similarity=0.031 Sum_probs=47.2
Q ss_pred cEEEEE--cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 11 TQALFY--NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 11 s~avv~--g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
.++||| |+.|. +++.|.++.|. ..+++...+ ....|+...+.|.+ +.+ ..+++ ....++|+++.|.|
T Consensus 3 ~VaIvGatG~vG~el~~lL~~h~fp---~~el~~~~s-~~~aG~~~~~~~~~---~~~-~~~~~--~~~~~~Dvvf~a~~ 72 (344)
T 3tz6_A 3 SIGIVGATGQVGQVMRTLLDERDFP---ASAVRFFAS-ARSQGRKLAFRGQE---IEV-EDAET--ADPSGLDIALFSAG 72 (344)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCC---EEEEEEEEC-TTTSSCEEEETTEE---EEE-EETTT--SCCTTCSEEEECSC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCC---ceEEEEEEC-cccCCCceeecCCc---eEE-EeCCH--HHhccCCEEEECCC
Confidence 588885 23333 78877877553 112333222 43444322232311 111 11111 11114899999999
Q ss_pred ChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 88 FRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 88 ~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
... .....+.+.++|++ +|-.|+-|
T Consensus 73 ~~~-s~~~a~~~~~~G~~-vID~Sa~~ 97 (344)
T 3tz6_A 73 SAM-SKVQAPRFAAAGVT-VIDNSSAW 97 (344)
T ss_dssp HHH-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred hHH-HHHHHHHHHhCCCE-EEECCCcc
Confidence 865 45555666668885 55556644
No 359
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=32.67 E-value=49 Score=32.86 Aligned_cols=45 Identities=7% Similarity=0.024 Sum_probs=36.0
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNN 130 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g 130 (608)
++....+++.++.+.+.||..+|++...+...+-+.+.+++++++
T Consensus 30 ~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p 74 (303)
T 4do7_A 30 LARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA 74 (303)
T ss_dssp GSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT
T ss_pred ccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC
Confidence 455566888999999999999999988776666777888887764
No 360
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=32.59 E-value=46 Score=33.26 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------ccH---HHH----HHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--------------RDE---YSL----VEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--------------~~~---~~f----~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- .+. +++ .+..++.. ..||||+..-|..-.|
T Consensus 58 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 133 (286)
T 3myb_A 58 LGEAFGTLAEDESVRAVVLAAS-GKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAA 133 (286)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEC-SSCSBCCBCHHHHHSSCCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCccCCcChhhhhccccHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeehHH
Confidence 4577888888999999999887 51 011 112 22233332 6899999988876543
No 361
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=32.45 E-value=75 Score=31.37 Aligned_cols=22 Identities=9% Similarity=0.002 Sum_probs=13.6
Q ss_pred CcEEEEEcCCch----HHHHHhhCccc
Q 007327 10 TTQALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 10 ~s~avv~g~~~~----~~~~l~~~~~~ 32 (608)
|++.|. |++|. +++.|++.||.
T Consensus 14 M~ilVt-GatG~iG~~l~~~L~~~g~~ 39 (342)
T 2x4g_A 14 VKYAVL-GATGLLGHHAARAIRAAGHD 39 (342)
T ss_dssp CEEEEE-STTSHHHHHHHHHHHHTTCE
T ss_pred CEEEEE-CCCcHHHHHHHHHHHHCCCE
Confidence 345555 54444 78888887653
No 362
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=32.45 E-value=73 Score=32.15 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCCC-EEEEecCCC----C---HH---HHHHHHHHHHhCCCeE
Q 007327 92 AASSMAALKQPTIR-VVAIIAEGV----P---EA---DTKQLIAYARSNNKVV 133 (608)
Q Consensus 92 ~~~~le~~~~~gv~-~~viis~Gf----~---e~---~~~~l~~~a~~~g~rv 133 (608)
...++++|.+.|++ .+|.+|+.. . .+ .++.+.++++++|+++
T Consensus 73 ~~~l~~a~~~~~~~~~~v~~Ss~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~ 125 (369)
T 3st7_A 73 LDHVLDILTRNTKKPAILLSSSIQATQDNPYGESKLQGEQLLREYAEEYGNTV 125 (369)
T ss_dssp HHHHHHHHTTCSSCCEEEEEEEGGGGSCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHhCCCCeEEEeCchhhcCCCCchHHHHHHHHHHHHHHHHhCCCE
Confidence 35689999999998 677666532 1 11 3555667777777653
No 363
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=32.44 E-value=34 Score=33.65 Aligned_cols=54 Identities=19% Similarity=0.230 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c---c------HHHHHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R---D------EYSLVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~---~------~~~f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- . | .+.|....++.. ..||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vvltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 106 (256)
T 3pe8_A 41 FFRALSDAQNDDDVDVVIVTGA-DPVFCAGLDLKELGDTTELPDISPKWPDMTKPVIGAINGAAVTG 106 (256)
T ss_dssp HHHHHHHHHHCTTCSEEEEEES-TTCSBCCBCTTTC---------CCCCCCCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCccCCcCHHHHhhhHHHHHHHHHHHhCCCCEEEEECCeeech
Confidence 4577888889999999999987 41 1 1 122222223333 6899999988876553
No 364
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=32.16 E-value=1.1e+02 Score=32.96 Aligned_cols=23 Identities=13% Similarity=-0.091 Sum_probs=15.6
Q ss_pred CCcEEEEEcCCch----HHHHHhhCccc
Q 007327 9 KTTQALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 9 p~s~avv~g~~~~----~~~~l~~~~~~ 32 (608)
|++|.|.| ++|. +++.|++.||.
T Consensus 147 ~m~VLVTG-atG~IG~~l~~~L~~~G~~ 173 (516)
T 3oh8_A 147 PLTVAITG-SRGLVGRALTAQLQTGGHE 173 (516)
T ss_dssp CCEEEEES-TTSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCE
Confidence 67777775 4433 88888888764
No 365
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=32.15 E-value=53 Score=32.27 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------cc-----------HHHHHHHHHhCC-CCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--------------RD-----------EYSLVEALKQGK-VNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--------------~~-----------~~~f~~~~r~a~-~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++..+ |- .+ .+.+.+..++.. ..||||+..-|..-.
T Consensus 43 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 121 (267)
T 3oc7_A 43 LHQGLRDASSDPAVRVVVLAHT-GGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRA 121 (267)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC-SSEEECCBC-----------CHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEET
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCceeCCcCchhhhhccCchhhhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeecc
Confidence 4567777888999999998876 41 00 011222333332 689999998777655
Q ss_pred C
Q 007327 264 L 264 (608)
Q Consensus 264 g 264 (608)
|
T Consensus 122 g 122 (267)
T 3oc7_A 122 G 122 (267)
T ss_dssp T
T ss_pred c
Confidence 4
No 366
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=31.78 E-value=54 Score=32.34 Aligned_cols=54 Identities=20% Similarity=0.175 Sum_probs=34.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccH------------------HHHHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDE------------------YSLVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~------------------~~f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- .|- +.+.+..++.. ..||||+..-|..-.|
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 113 (268)
T 3i47_A 36 MRIRLDSAINDTNVRVIVLKAN-GKHFSAGADLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGG 113 (268)
T ss_dssp HHHHHHHHHHCTTCSEEEEEEC-SSCSBCSBCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCeeCCCChhhhhccccccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEhH
Confidence 4467777788888898888877 41 011 11222333332 6899999988876543
No 367
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=31.72 E-value=54 Score=32.59 Aligned_cols=54 Identities=20% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c---cHH-----------H----HHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R---DEY-----------S----LVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~---~~~-----------~----f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- . |-. + +.+..++.. ..||||+..-|..-.|
T Consensus 55 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 129 (277)
T 4di1_A 55 IVAAADELGRRDDIGAVVLFGG-HEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGA 129 (277)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC-SSCSBCCBCHHHHHTCCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCcEEEEEECC-CCCEecCcCcccccccChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEehh
Confidence 4577788888999999999877 41 1 111 1 122233332 7899999987776543
No 368
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=31.71 E-value=55 Score=33.56 Aligned_cols=44 Identities=11% Similarity=-0.009 Sum_probs=28.2
Q ss_pred CHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCC
Q 007327 68 TVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEG 113 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~G 113 (608)
+.++++-...++|+++.|+|..... +..+.+.++|+|.+++ |+.
T Consensus 81 d~~~l~~~~~~vDvV~eatg~~~~~-e~a~~~l~aGak~V~i-Sap 124 (335)
T 1u8f_O 81 DPSKIKWGDAGAEYVVESTGVFTTM-EKAGAHLQGGAKRVII-SAP 124 (335)
T ss_dssp SGGGCCTTTTTCCEEEECSSSCCSH-HHHGGGGGGTCSEEEE-SSC
T ss_pred CHHHCccccCCCCEEEECCCchhhH-HHHHHHHhCCCeEEEe-ccC
Confidence 5666531001489999999987644 4555666689986655 553
No 369
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=31.55 E-value=1.6e+02 Score=23.63 Aligned_cols=79 Identities=10% Similarity=0.141 Sum_probs=51.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|..+-.....+...+.+.|. . +... .+..+.++++.+. ...+|++-++....++-++++.+|+..
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~--~-v~~~-------~~~~~a~~~~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~~ 72 (127)
T 2jba_A 4 RILVVEDEAPIREMVCFVLEQNGF--Q-PVEA-------EDYDSAVNQLNEP-WPDLILLAWMLPGGSGIQFIKHLRRES 72 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------CSHHHHHTTCSSS-CCSEEEEESEETTEEHHHHHHHHHTST
T ss_pred EEEEEcCCHHHHHHHHHHHHHCCc--e-EEEe-------CCHHHHHHHHhcc-CCCEEEEecCCCCCCHHHHHHHHHhCc
Confidence 477777777777777777766544 2 2222 2345677776553 356777766634457889999999754
Q ss_pred --CCCCEEEEEe
Q 007327 249 --VNKPVVAWVS 258 (608)
Q Consensus 249 --~~KPVvvlk~ 258 (608)
...|||++-.
T Consensus 73 ~~~~~~ii~~s~ 84 (127)
T 2jba_A 73 MTRDIPVVMLTA 84 (127)
T ss_dssp TTTTSCEEEEEE
T ss_pred ccCCCCEEEEeC
Confidence 5679888843
No 370
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=31.53 E-value=1.8e+02 Score=27.86 Aligned_cols=33 Identities=6% Similarity=-0.005 Sum_probs=20.9
Q ss_pred ccEEEEeccChh---------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 79 ADVFINFSSFRS---------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 79 vDlavi~vp~~~---------------~~~~~le~~~~~gv~~~viis~ 112 (608)
+|.+|-+..... ....++++|.+.|+ .+|.+|+
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 116 (310)
T 1eq2_A 69 VEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 116 (310)
T ss_dssp CCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred CcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 798887654321 02457788887788 5666664
No 371
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=31.50 E-value=1.6e+02 Score=28.11 Aligned_cols=171 Identities=9% Similarity=0.019 Sum_probs=86.0
Q ss_pred ccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE--cCCccc-
Q 007327 65 VHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATVG- 140 (608)
Q Consensus 65 ~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl--GPNc~G- 140 (608)
.+..+.+...+. ..++.+....... .....++.+.+.++.++|+...... .+..+.+++.|+.++ +-...+
T Consensus 26 ~~~gi~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~----~~~~~~~~~~~iPvV~~~~~~~~~ 100 (291)
T 3egc_A 26 VASGVESEARHK-GYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEGE----HDYLRTELPKTFPIVAVNRELRIP 100 (291)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSSC----CHHHHHSSCTTSCEEEESSCCCCT
T ss_pred HHHHHHHHHHHC-CCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCCC----hHHHHHhhccCCCEEEEecccCCC
Confidence 344455544444 3777766544321 1234667777789999988765432 234555667788755 322111
Q ss_pred -c--cccCcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeE--EeecCCCCCCCCC
Q 007327 141 -G--IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYE--GIAIGGDVFPGST 209 (608)
Q Consensus 141 -i--~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~--~vs~Gn~~~~dv~ 209 (608)
+ +..+....+ -.....+- .....+|++++..... ...+.+.+.+.|+.+.. ++...... +-.
T Consensus 101 ~~~~V~~D~~~~g---~~a~~~L~--~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~--~~~ 173 (291)
T 3egc_A 101 GCGAVLSENVRGA---RTAVEYLI--ARGHTRIGAIVGSAGLMTSRERLKGFRAAMSAAGLPVRQEWIAAGGVRA--DNG 173 (291)
T ss_dssp TCEEEEECHHHHH---HHHHHHHH--HTTCCSEEEECSCTTSHHHHHHHHHHHHHHHHTTCCCCGGGEEC--------CC
T ss_pred CCCEEEECcHHHH---HHHHHHHH--HcCCCEEEEEeCCCCCcCHHHHHHHHHHHHHHcCCCCCHHHeEeCCCCh--hHH
Confidence 0 001100000 00000000 1246689999766432 12234556677776532 33333333 555
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVN 250 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~ 250 (608)
...+.++|...|+..+|... +-.....+++++++...+
T Consensus 174 ~~~~~~~l~~~~~~~ai~~~---~d~~a~g~~~al~~~g~~ 211 (291)
T 3egc_A 174 RDGAIKVLTGADRPTALLTS---SHRITEGAMQALNVLGLR 211 (291)
T ss_dssp HHHHHHHHTC-CCCSEEEES---SHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCcEEEEC---CcHHHHHHHHHHHHcCCC
Confidence 66677788788888887654 223345678888876544
No 372
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=31.46 E-value=73 Score=31.53 Aligned_cols=52 Identities=21% Similarity=0.300 Sum_probs=32.2
Q ss_pred HHHHHHHhhcCCCccEEEEEE-----ecCCc------c-------------------HHHHHHHHHhCCCCCCEEEEEeC
Q 007327 210 LSDHILRFNNIPQVKMMVVLG-----ELGGR------D-------------------EYSLVEALKQGKVNKPVVAWVSG 259 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~-----E~g~~------~-------------------~~~f~~~~r~a~~~KPVvvlk~G 259 (608)
+.+.++.+.+||++|+|++-. + |-+ | ..+++..+++ ..||||+..-|
T Consensus 42 L~~al~~~~~d~~vr~vVltg~~~~~~-G~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~kPvIAav~G 118 (275)
T 4eml_A 42 LYDAFCNAREDNRIGVVLLTGAGPHSD-GKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRS--MPKVVIALVAG 118 (275)
T ss_dssp HHHHHHHHHHCTTCCEEEEEECCCCTT-SCCEEECCBCCC--------------CCCHHHHHHHHHH--SSSEEEEEECS
T ss_pred HHHHHHHHHhCCCceEEEEeCCCcCcC-CCCceeCCcChhhhhcccccchhhHHHHHHHHHHHHHHh--CCCCEEEEECC
Confidence 446666777788888888877 5 420 1 1122333333 68999999887
Q ss_pred CCccC
Q 007327 260 TCARL 264 (608)
Q Consensus 260 rs~~g 264 (608)
..-.|
T Consensus 119 ~a~Gg 123 (275)
T 4eml_A 119 YAIGG 123 (275)
T ss_dssp EEETH
T ss_pred eeehH
Confidence 76543
No 373
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=31.44 E-value=70 Score=32.81 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=16.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEe
Q 007327 210 LSDHILRFNNIPQVKMMVVLGE 231 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E 231 (608)
+.+.++.+.+||++++|+|-.+
T Consensus 89 L~~al~~~~~d~~vrvVVltG~ 110 (334)
T 3t8b_A 89 LYRVLDHARMSPDVGVVLLTGN 110 (334)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEeCC
Confidence 4466677777888888888777
No 374
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=31.44 E-value=27 Score=34.99 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=34.4
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 93 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 93 ~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
.+.++.|.++|+++++|-+.|-=-.+.++..+.|.++|+-++|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~gi~~~~ 276 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLG 276 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHcCCEEEE
Confidence 5778889899999988866664212468899999999999987
No 375
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=31.42 E-value=2.7e+02 Score=24.90 Aligned_cols=80 Identities=16% Similarity=0.049 Sum_probs=55.4
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+.+|-+|.-.-.....+...+.+.| +. ++.. -+..+.++.+.+. ...+|++-+.....+|-++++.+|+
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~g--~~-v~~~-------~~~~~al~~~~~~-~~dlvl~D~~lp~~~g~~~~~~l~~ 72 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSAG--FE-VETF-------DCASTFLEHRRPE-QHGCLVLDMRMPGMSGIELQEQLTA 72 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTT--CE-EEEE-------SSHHHHHHHCCTT-SCEEEEEESCCSSSCHHHHHHHHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCC--ce-EEEc-------CCHHHHHHhhhcc-CCCEEEEeCCCCCCCHHHHHHHHHh
Confidence 4478888888888887777777654 43 2222 2346778877654 3567777666444578999999998
Q ss_pred CCCCCCEEEEE
Q 007327 247 GKVNKPVVAWV 257 (608)
Q Consensus 247 a~~~KPVvvlk 257 (608)
.....|||++-
T Consensus 73 ~~~~~~ii~ls 83 (208)
T 1yio_A 73 ISDGIPIVFIT 83 (208)
T ss_dssp TTCCCCEEEEE
T ss_pred cCCCCCEEEEe
Confidence 66778999884
No 376
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=31.38 E-value=60 Score=31.85 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=34.3
Q ss_pred HHHHHHHhhcCCCccEEEEEE-ecC-----CccH----------HH----H-HHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLG-ELG-----GRDE----------YS----L-VEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~-E~g-----~~~~----------~~----f-~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-. + | ..|- .. | .+..++.. ..||||+..-|..-.|
T Consensus 40 L~~al~~~~~d~~vr~vVltg~~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 115 (265)
T 2ppy_A 40 FNAAIDDIRFDPDIKVVIVMSDV-PKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGG 115 (265)
T ss_dssp HHHHHHHHHTCTTCCEEEEEECS-TTEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCcEEEEEEcCC-CCeeeeCcCHHHHhccchhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeH
Confidence 456777888899999999888 5 3 1111 11 2 23333332 6899999987766543
No 377
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=31.19 E-value=2.1e+02 Score=23.11 Aligned_cols=78 Identities=12% Similarity=0.024 Sum_probs=53.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|.-+-.....+...+.+.|. . +... -+..+.++++.+. ...+|++=++....++-++++.+|+.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~--~-v~~~-------~~~~~~~~~~~~~-~~dlvi~D~~l~~~~g~~~~~~l~~~ 72 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTMNGF--A-VKMH-------QSAEAFLAFAPDV-RNGVLVTDLRMPDMSGVELLRNLGDL 72 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTC--E-EEEE-------SCHHHHHHHGGGC-CSEEEEEECCSTTSCHHHHHHHHHHT
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCc--E-EEEe-------CCHHHHHHHHhcC-CCCEEEEECCCCCCCHHHHHHHHHhc
Confidence 3678888887777777777766554 2 2222 1346778887664 34677776663445788999999886
Q ss_pred CCCCCEEEE
Q 007327 248 KVNKPVVAW 256 (608)
Q Consensus 248 ~~~KPVvvl 256 (608)
....|||++
T Consensus 73 ~~~~~ii~~ 81 (126)
T 1dbw_A 73 KINIPSIVI 81 (126)
T ss_dssp TCCCCEEEE
T ss_pred CCCCCEEEE
Confidence 667899888
No 378
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=31.15 E-value=63 Score=32.04 Aligned_cols=54 Identities=28% Similarity=0.327 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHH-------------HHH----HHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEY-------------SLV----EALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~-------------~f~----~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- .|-. ++. +..++.. ..||||+..-|..-.|
T Consensus 60 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 136 (276)
T 3rrv_A 60 LARLWQRLTDDPTARAAVITGA-GRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGL 136 (276)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCcccCCcCHHHHhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHH
Confidence 4577888888999999999887 51 0111 111 1222222 7899999988876643
No 379
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=31.13 E-value=71 Score=31.32 Aligned_cols=54 Identities=24% Similarity=0.412 Sum_probs=35.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC-----CccHHHHHHHH---------------HhC--CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELG-----GRDEYSLVEAL---------------KQG--KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g-----~~~~~~f~~~~---------------r~a--~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ | ..|-..|.... ++. ...||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~Gg 116 (265)
T 3swx_A 41 LALALGEYETDTDLRAAVLYGE-GPLFTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTL 116 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCHHHHHHHHC--CCCCCTTCCCTTCCSSCCCSSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCcccCcChHHHhhcccchhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeehH
Confidence 4577778888999999999887 5 12333443321 122 36799999987766543
No 380
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=31.08 E-value=42 Score=32.65 Aligned_cols=53 Identities=28% Similarity=0.394 Sum_probs=30.8
Q ss_pred HHHHHHhhcCCCccEEEEEE-ecCC-----cc-----------H-HHH----HHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 211 SDHILRFNNIPQVKMMVVLG-ELGG-----RD-----------E-YSL----VEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 211 ~d~l~~l~~Dp~T~~I~ly~-E~g~-----~~-----------~-~~f----~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
.+.++.+.+||++|+|++-. + |- .| . ++| .+..++. ...||||+..-|..-.|
T Consensus 33 ~~al~~~~~d~~vr~vVltg~~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~Gg 108 (250)
T 2a7k_A 33 KDALARANADDSVRAVVVYGGA-ERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGM 108 (250)
T ss_dssp HHHHHHHHHCTTCCEEEEECCT-TSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhCCCcEEEEEECCC-CCCccCCcCHHHHhhcCchhhHHHHHHHHHHHHHHHHcCCCCEEEEECCeEeHH
Confidence 45666667777777777776 4 20 01 1 122 2223333 36899999987766543
No 381
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=30.90 E-value=1.4e+02 Score=30.01 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=38.6
Q ss_pred cccCCHHHHhhcCCCccEEEEeccC--h--hcHHHHHHHhcCCCCCEEEEec----CCC--CHHHHHHHHHHHHhCCCeE
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSF--R--SAAASSMAALKQPTIRVVAIIA----EGV--PEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~--~--~~~~~~le~~~~~gv~~~viis----~Gf--~e~~~~~l~~~a~~~g~rv 133 (608)
|+|+...++....+ ..+..+.+.. . -.+++ ++++...+.|.+++.+ .|. +....++|.++|+++|+.|
T Consensus 123 p~y~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~-l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~l 200 (385)
T 1b5p_A 123 PYWVSYPEMVRFAG-GVVVEVETLPEEGFVPDPER-VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYL 200 (385)
T ss_dssp SCCTHHHHHHHHTT-CEEEEEECCGGGTTCCCHHH-HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCchhHHHHHHHcC-CEEEEeecCcccCCCCCHHH-HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEE
Confidence 45555555444332 4444333321 1 12334 4443334566655543 342 4557889999999999877
Q ss_pred EcCC
Q 007327 134 IGPA 137 (608)
Q Consensus 134 lGPN 137 (608)
+==+
T Consensus 201 i~De 204 (385)
T 1b5p_A 201 VSDE 204 (385)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6333
No 382
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=30.88 E-value=49 Score=34.39 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=27.5
Q ss_pred HHHhcCCCCCEEEEec-C-CCCHHHHHHHHHHHHhCCCeEE
Q 007327 96 MAALKQPTIRVVAIIA-E-GVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 96 le~~~~~gv~~~viis-~-Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
++.+.++||+.+|..+ . |.. .+.+.++++|+++|+.++
T Consensus 81 l~~~~~aGv~tiV~~~g~~g~~-r~~~~l~~la~~~gi~i~ 120 (365)
T 3rhg_A 81 LNNFKELGGKTIVDATGSSSIG-RDIRKLKQVAELTGINVV 120 (365)
T ss_dssp HHHHHHTTEEEEEECCCSGGGT-CCHHHHHHHHHHHCCEEE
T ss_pred HHHHHhcCCCeEEEcCCCCCCC-CCHHHHHHHHHHHCCcEE
Confidence 3556668999988877 3 333 367788888888888765
No 383
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=30.80 E-value=2.1e+02 Score=28.29 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=29.8
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCe
Q 007327 93 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKV 132 (608)
Q Consensus 93 ~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~r 132 (608)
+...++|.+.|+..+++.---+ ...+++++.++++|+.
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp~--ee~~~~~~~~~~~gl~ 150 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVPV--EESAPFSKAAKAHGIA 150 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCEEEeCCCCH--hhHHHHHHHHHHcCCe
Confidence 6678999999999988854333 3467899999999975
No 384
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.76 E-value=65 Score=34.62 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=86.0
Q ss_pred HHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE---------------EcCCcccccccCcccccccCCccccc
Q 007327 95 SMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV---------------IGPATVGGIQAGAFKIGDTAGTIDNI 159 (608)
Q Consensus 95 ~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv---------------lGPNc~Gi~~~~~~~l~~~~~~~~~~ 159 (608)
+.| +.+.|...+.++.+-......+++.+.|++.||-+ +|+..+|+-|.+...+ ...+...
T Consensus 123 i~e-a~~~GAD~ILLi~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~---~~dl~~~ 198 (452)
T 1pii_A 123 IYL-ARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDL---SIDLNRT 198 (452)
T ss_dssp HHH-HHHTTCSEEEEETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTT---EECTHHH
T ss_pred HHH-HHHcCCCEEEEEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCC---CCCHHHH
Confidence 444 44589999999998777767777888888888754 3777788766542111 0111000
Q ss_pred ccccCCCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHH
Q 007327 160 IHCKLYRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYS 239 (608)
Q Consensus 160 ~p~~~~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~ 239 (608)
......-|.++-+||-||--+.+-+..+.+. ...|=+|......-+....+.-|.. ...|++ |+++++.
T Consensus 199 ~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~----a~avLVGealmr~~d~~~~~~~l~~-~~~KIC------Git~~ed 267 (452)
T 1pii_A 199 RELAPKLGHNVTVISESGINTYAQVRELSHF----ANGFLIGSALMAHDDLHAAVRRVLL-GENKVC------GLTRGQD 267 (452)
T ss_dssp HHHHHHHCTTSEEEEESCCCCHHHHHHHTTT----CSEEEECHHHHTCSCHHHHHHHHHH-CSCEEC------CCCSHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCHHHHHHHHHh----CCEEEEcHHHcCCcCHHHHHHHHHH-Hhcccc------CCCcHHH
Confidence 0000012445779999998877766655443 4455566654445667777777764 355555 8898888
Q ss_pred HHHHHHh
Q 007327 240 LVEALKQ 246 (608)
Q Consensus 240 f~~~~r~ 246 (608)
...+++.
T Consensus 268 a~~a~~~ 274 (452)
T 1pii_A 268 AKAAYDA 274 (452)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7777665
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=30.73 E-value=1.2e+02 Score=27.25 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=22.9
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCC-CCEEEEecC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPT-IRVVAIIAE 112 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~g-v~~~viis~ 112 (608)
+.|++|+++|.......+++.+.+.+ ...+++.+.
T Consensus 105 ~ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 105 HVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 47999999998665556666666555 444444443
No 386
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=30.64 E-value=31 Score=32.86 Aligned_cols=76 Identities=16% Similarity=0.262 Sum_probs=48.1
Q ss_pred HHHHHHHHHhcCCceeEEeecCCCCCCCCC---HHHHHHHhhcCCCccEEEEEEe-cCCc--cHHHHHHHHHhCCCCCCE
Q 007327 180 SNELYNTIARVTDGIYEGIAIGGDVFPGST---LSDHILRFNNIPQVKMMVVLGE-LGGR--DEYSLVEALKQGKVNKPV 253 (608)
Q Consensus 180 ~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~---~~d~l~~l~~Dp~T~~I~ly~E-~g~~--~~~~f~~~~r~a~~~KPV 253 (608)
...+.+.+.+.. +|-+++.. .+.+ +.+.|.++.+|+.++.|.||+- ||+. .+....+.+++. +|||
T Consensus 17 ~~~~~~~l~~~r-----ii~l~G~I-~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~~~I~~~i~~~--~~pV 88 (208)
T 2cby_A 17 TDSVYERLLSER-----IIFLGSEV-NDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLA--PCDI 88 (208)
T ss_dssp HHHHHHHHHTTT-----EEEECSCB-CHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHHHHHHHHHHHC--SSCE
T ss_pred hhhHHHHhhcCc-----EEEEcCEE-CHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHHHHHHHHHHhc--CCCE
Confidence 445555554433 45566654 1222 3445566688899999999999 3332 345667777774 5899
Q ss_pred EEEEeCCCcc
Q 007327 254 VAWVSGTCAR 263 (608)
Q Consensus 254 vvlk~Grs~~ 263 (608)
+++-.|....
T Consensus 89 ~~~v~g~AaS 98 (208)
T 2cby_A 89 ATYAMGMAAS 98 (208)
T ss_dssp EEEEEEEEET
T ss_pred EEEECcEeHH
Confidence 9998775443
No 387
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=30.54 E-value=1.5e+02 Score=29.07 Aligned_cols=97 Identities=12% Similarity=0.092 Sum_probs=46.5
Q ss_pred CCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeC-CCCCC--ccccc-cCcee----ecccccCCHHHHhhc
Q 007327 8 SKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIIN-PGAEG--FQKLF-FGQEE----IAIPVHSTVEAACAA 75 (608)
Q Consensus 8 ~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~-p~~~~--~~~~~-~g~ev----~G~~~y~sv~~i~~~ 75 (608)
.|+.+++|-|.+|. +++.|++.|+. |.++.- +.+.. ....+ .+..+ ..+.-..++.++...
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 84 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYR-------VHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIK 84 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCE-------EEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCe-------EEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHH
Confidence 35556666666555 77888887653 444441 21110 00000 00111 123333445555443
Q ss_pred CCCccEEEEeccChh-----------------cHHHHHHHhcCCCC-CEEEEecC
Q 007327 76 HPMADVFINFSSFRS-----------------AAASSMAALKQPTI-RVVAIIAE 112 (608)
Q Consensus 76 ~p~vDlavi~vp~~~-----------------~~~~~le~~~~~gv-~~~viis~ 112 (608)
. ++|.+|-+..... ....++++|.+.|+ +.+|.+|+
T Consensus 85 ~-~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 85 A-QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp H-CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred c-CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 2 2688876544211 02356788887786 77777765
No 388
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=30.20 E-value=56 Score=31.61 Aligned_cols=24 Identities=4% Similarity=-0.061 Sum_probs=13.8
Q ss_pred CCcEEEEEcCCch----HHHHHhhCccc
Q 007327 9 KTTQALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 9 p~s~avv~g~~~~----~~~~l~~~~~~ 32 (608)
|..+++|-|.+|. +++.|++.||.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~ 38 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVE 38 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCe
Confidence 3344445465554 77788877653
No 389
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=30.18 E-value=79 Score=26.27 Aligned_cols=80 Identities=6% Similarity=-0.071 Sum_probs=55.6
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcC-CceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVT-DGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g-~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
.-+|-+|..+-.....+...+.+.| +-+. .++.|.++ ++.+. .....+|++-++....++-++++.+|
T Consensus 14 ~~~ilivdd~~~~~~~l~~~L~~~g~~~v~-~~~~~~~a---------~~~l~-~~~~dlvi~D~~l~~~~g~~~~~~l~ 82 (135)
T 3snk_A 14 RKQVALFSSDPNFKRDVATRLDALAIYDVR-VSETDDFL---------KGPPA-DTRPGIVILDLGGGDLLGKPGIVEAR 82 (135)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTSSEEEE-EECGGGGG---------GCCCT-TCCCSEEEEEEETTGGGGSTTHHHHH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhhcCCeEEE-EeccHHHH---------HHHHh-ccCCCEEEEeCCCCCchHHHHHHHHH
Confidence 4479999999988888888888766 5433 34444444 33443 34467788777744567788999999
Q ss_pred hCCCCCCEEEEE
Q 007327 246 QGKVNKPVVAWV 257 (608)
Q Consensus 246 ~a~~~KPVvvlk 257 (608)
+.....|||++-
T Consensus 83 ~~~~~~~ii~~s 94 (135)
T 3snk_A 83 ALWATVPLIAVS 94 (135)
T ss_dssp GGGTTCCEEEEE
T ss_pred hhCCCCcEEEEe
Confidence 866678998883
No 390
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=29.96 E-value=1.3e+02 Score=28.78 Aligned_cols=44 Identities=14% Similarity=0.139 Sum_probs=29.0
Q ss_pred CCHHHHhhcCCCccEEEEeccCh-------hcHHHHHHHhcCCCCCEEEEecCC
Q 007327 67 STVEAACAAHPMADVFINFSSFR-------SAAASSMAALKQPTIRVVAIIAEG 113 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~-------~~~~~~le~~~~~gv~~~viis~G 113 (608)
.++.++.. ++|.+|-+.... .....++++|.+.|++.+|.+|+.
T Consensus 58 ~~l~~~~~---~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 58 ESLQKAFA---GVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHTT---TCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred HHHHHHHh---cCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34555443 479888765431 123467888988999988888763
No 391
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=29.93 E-value=54 Score=33.71 Aligned_cols=35 Identities=20% Similarity=-0.025 Sum_probs=25.2
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGV 114 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf 114 (608)
++|+++.|+|... .....+.+.++|++ +|-.++-|
T Consensus 77 ~vDvVf~atp~~~-s~~~a~~~~~aG~~-VId~s~~~ 111 (350)
T 2ep5_A 77 DVDVVLSALPNEL-AESIELELVKNGKI-VVSNASPF 111 (350)
T ss_dssp TCSEEEECCCHHH-HHHHHHHHHHTTCE-EEECSSTT
T ss_pred CCCEEEECCChHH-HHHHHHHHHHCCCE-EEECCccc
Confidence 4899999999865 45566666678988 55556555
No 392
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=29.81 E-value=67 Score=32.05 Aligned_cols=54 Identities=19% Similarity=0.359 Sum_probs=34.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc-----c------------------HHHHH----HHHHhCC-CCCCEEEEEeCCC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR-----D------------------EYSLV----EALKQGK-VNKPVVAWVSGTC 261 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~-----~------------------~~~f~----~~~r~a~-~~KPVvvlk~Grs 261 (608)
+.+.++.+.+||++|+|++..+ |-. | ..++. +..++.. ..||||+..-|..
T Consensus 56 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a 134 (290)
T 3sll_A 56 FKQMLVDISHDNDVRAVVITGA-GKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAA 134 (290)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-TTCSBCC------CCCSSCTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEE
T ss_pred HHHHHHHHHcCCCeeEEEEECC-CCCeeCCcChHHHhcccccccccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCee
Confidence 4567777888999999998876 410 1 11222 2233322 7899999987776
Q ss_pred ccC
Q 007327 262 ARL 264 (608)
Q Consensus 262 ~~g 264 (608)
-.|
T Consensus 135 ~Gg 137 (290)
T 3sll_A 135 IGG 137 (290)
T ss_dssp ETH
T ss_pred hHH
Confidence 543
No 393
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=29.80 E-value=57 Score=37.14 Aligned_cols=76 Identities=16% Similarity=0.094 Sum_probs=60.8
Q ss_pred EecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 173 VSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 173 vSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
++-++.-...+.+.+.++|+-+-. -.+..|.+.++.+|++..+|++..+ . .+.+|++.+|+...+.|
T Consensus 12 ~~~~~~~i~~L~~~Le~~g~~V~~----------a~s~~Da~~~i~~~~~i~avIld~d-~--~~~~ll~~Ir~~~~~iP 78 (715)
T 3n75_A 12 VYFKEEPIRELHRALERLNFQIVY----------PNDRDDLLKLIENNARLCGVIFDWD-K--YNLELCEEISKMNENLP 78 (715)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEC----------CSSHHHHHHHHHHCTTEEEEEEEHH-H--HHHHHHHHHHHHCTTCE
T ss_pred cccchHHHHHHHHHHHHCCcEEEE----------eCCHHHHHHHHHhCCCceEEEEecc-c--cHHHHHHHHHHhCCCCC
Confidence 445666677788888888776532 5678999999999999999999988 3 36789999998778999
Q ss_pred EEEEEeCCC
Q 007327 253 VVAWVSGTC 261 (608)
Q Consensus 253 Vvvlk~Grs 261 (608)
|.++....+
T Consensus 79 VFl~~~~~~ 87 (715)
T 3n75_A 79 LYAFANTYS 87 (715)
T ss_dssp EEEECCTTC
T ss_pred EEEEecCCc
Confidence 999976644
No 394
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=29.56 E-value=1.1e+02 Score=29.34 Aligned_cols=89 Identities=8% Similarity=0.075 Sum_probs=46.2
Q ss_pred CCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEe-CCCCCC-ccccccCceeecccccCCHHHHhhcCCCccEE
Q 007327 9 KTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGII-NPGAEG-FQKLFFGQEEIAIPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 9 p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~-~p~~~~-~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDla 82 (608)
.+++.|. |+ |. +++.|++.||. |.++. .+.+.. ....+ ...+.-..++.++... ++|.+
T Consensus 3 ~~~ilVt-Ga-G~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~----~~Dl~d~~~~~~~~~~--~~d~v 67 (286)
T 3gpi_A 3 LSKILIA-GC-GDLGLELARRLTAQGHE-------VTGLRRSAQPMPAGVQTL----IADVTRPDTLASIVHL--RPEIL 67 (286)
T ss_dssp CCCEEEE-CC-SHHHHHHHHHHHHTTCC-------EEEEECTTSCCCTTCCEE----ECCTTCGGGCTTGGGG--CCSEE
T ss_pred CCcEEEE-CC-CHHHHHHHHHHHHCCCE-------EEEEeCCccccccCCceE----EccCCChHHHHHhhcC--CCCEE
Confidence 3566767 44 44 78888888753 44444 121110 11111 1122233344444432 37988
Q ss_pred EEeccCh------------hcHHHHHHHhcCCCCCEEEEecC
Q 007327 83 INFSSFR------------SAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 83 vi~vp~~------------~~~~~~le~~~~~gv~~~viis~ 112 (608)
|-+.... .....++++|.+.|++.+|.+|+
T Consensus 68 ih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 68 VYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp EECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 7665321 11346778887778887777765
No 395
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=29.34 E-value=2.1e+02 Score=27.85 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=29.1
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeE
Q 007327 93 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 93 ~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rv 133 (608)
...++.|.+.|+.++++. .++....+++.+.++++|+.+
T Consensus 112 ~~f~~~~~~aG~dgvii~--dl~~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVP--DLPPEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHHHTTCCEEECT--TCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHcCCCEEEEC--CCCHHHHHHHHHHHHHcCCcE
Confidence 456777888999987764 455555778889999999654
No 396
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=29.06 E-value=89 Score=32.22 Aligned_cols=54 Identities=19% Similarity=0.266 Sum_probs=34.7
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc------cHH--------------HHHH----HHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR------DEY--------------SLVE----ALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~------~~~--------------~f~~----~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |-+ |-. +|.. ...+. ...||||+..-|..-.|
T Consensus 41 l~~al~~~~~d~~vr~vvltg~-G~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~Gg 119 (353)
T 4hdt_A 41 MAERLAAWENDDSVRAVLLTGA-GERGLCAGGDVVAIYHSAKADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGG 119 (353)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES-SSSBSBCCBCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETH
T ss_pred HHHHHHHHHhCCCceEEEEEeC-CCCCEecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeec
Confidence 4577888888999999999887 532 211 2221 22222 26899999987766543
No 397
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=29.06 E-value=4e+02 Score=25.96 Aligned_cols=173 Identities=9% Similarity=0.057 Sum_probs=85.4
Q ss_pred CCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE--cCCccc---
Q 007327 67 STVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI--GPATVG--- 140 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl--GPNc~G--- 140 (608)
..+++...+. ..++.+....... .-...++.+.+.++.++|+.+..... ..+.+.+++.++.++ +-...+
T Consensus 83 ~gi~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~---~~~~~~~~~~~iPvV~~~~~~~~~~~ 158 (338)
T 3dbi_A 83 FHAARMAEEK-GRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV---DEIDDIIDAHSQPIMVLNRRLRKNSS 158 (338)
T ss_dssp HHHHHHHHHT-TCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH---HHHHHHHHHCSSCEEEESSCCSSSGG
T ss_pred HHHHHHHHHC-CCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh---HHHHHHHHcCCCCEEEEcCCCCCCCC
Confidence 3444444444 3677665433221 12236677777899999987654442 456677788887543 432211
Q ss_pred -ccccCcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeE-EeecCCCCCCCCCHHH
Q 007327 141 -GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYE-GIAIGGDVFPGSTLSD 212 (608)
Q Consensus 141 -i~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~-~vs~Gn~~~~dv~~~d 212 (608)
.+..+... +.....-........+|++++..-.. .....+.+.+.|+.+.. .+-.|+.. .+-...-
T Consensus 159 ~~V~~D~~~-----~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~-~~~~~~~ 232 (338)
T 3dbi_A 159 HSVWCDHKQ-----TSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWT-PASGAEG 232 (338)
T ss_dssp GEECBCHHH-----HHHHHHHHHHHTTCCSEEEECCCTTCHHHHHHHHHHHHHHHHTTCCCCGGGEECCCSS-HHHHHHH
T ss_pred CEEEEChHH-----HHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHHHCCCCCCcceEEeCCCC-HHHHHHH
Confidence 11111100 00000000001245689999764322 12244556777776542 12223221 0112233
Q ss_pred HHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 213 HILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 213 ~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
+-++|...|+..+|... +-...-.+++++++...+.|
T Consensus 233 ~~~ll~~~~~~~ai~~~---nd~~A~g~~~al~~~G~~vP 269 (338)
T 3dbi_A 233 VEMLLERGAKFSALVAS---NDDMAIGAMKALHERGVAVP 269 (338)
T ss_dssp HHHHHHTTCCCSEEEES---SHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHcCCCCCeEEEEC---ChHHHHHHHHHHHHcCCCCC
Confidence 44556677887877654 21223467888888655444
No 398
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=28.55 E-value=1.3e+02 Score=30.44 Aligned_cols=43 Identities=9% Similarity=-0.023 Sum_probs=28.5
Q ss_pred CHHHHhhcCCCccEEEEeccCh-----hcHHHHHHHhcCCC-CCEEEEecCC
Q 007327 68 TVEAACAAHPMADVFINFSSFR-----SAAASSMAALKQPT-IRVVAIIAEG 113 (608)
Q Consensus 68 sv~~i~~~~p~vDlavi~vp~~-----~~~~~~le~~~~~g-v~~~viis~G 113 (608)
++.++.. .+|.+|.+.... .....++++|.+.| ++.+|.+|+.
T Consensus 66 ~l~~~~~---~~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 66 LMDTLFE---GAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp HHHHHHT---TCSEEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred HHHHHHh---cCCEEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 4555443 479888665432 11256788888888 9998888875
No 399
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=28.44 E-value=1e+02 Score=29.99 Aligned_cols=54 Identities=28% Similarity=0.408 Sum_probs=33.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----cc---------HHH-----HHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RD---------EYS-----LVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~---------~~~-----f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++++|++..+ |- .| ... +.+..++.. ..||||+..-|..-.|
T Consensus 35 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 108 (257)
T 2ej5_A 35 VTKALKQAGADPNVRCVVITGA-GRAFCAGEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGA 108 (257)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCC-------CHHHHHHHTHHHHHHHHHHCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCeEEEEEECC-CCCccCCcCHHHHhhccchhHHHHHHHHHHHHHHHhCCCCEEEEECccccch
Confidence 4566777788888888888876 41 01 111 223333332 6899999987766543
No 400
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=28.33 E-value=67 Score=31.69 Aligned_cols=54 Identities=24% Similarity=0.377 Sum_probs=35.6
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc-----cHH-------------HHH----HHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR-----DEY-------------SLV----EALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~-----~~~-------------~f~----~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |-. |-. ++. +..++. ...||||+..-|..-.|
T Consensus 45 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 121 (272)
T 3qk8_A 45 LADVWPVIDRDPDVRVVLVRGE-GKAFSSGGSFELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGA 121 (272)
T ss_dssp HHHHHHHHHHCTTCSEEEEEES-SSCSBCEECHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCeeCCcCHHHHhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 5678888889999999999988 520 111 111 222232 37899999987776543
No 401
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=28.12 E-value=80 Score=30.86 Aligned_cols=19 Identities=11% Similarity=0.198 Sum_probs=14.3
Q ss_pred HHHHHhcCCCCCEEEEecC
Q 007327 94 SSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~ 112 (608)
.++++|.+.+++.+|.+|+
T Consensus 89 ~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 89 NIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEcc
Confidence 5677787778887777775
No 402
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=27.95 E-value=2e+02 Score=23.53 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=67.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.-.-.....+...+.+.| +. +.... +..+.++++.+. ...+|++-++....++.++++.+++..
T Consensus 5 ~Ilivdd~~~~~~~l~~~L~~~g--~~-v~~~~-------~~~~al~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~~ 73 (132)
T 3crn_A 5 RILIVDDDTAILDSTKQILEFEG--YE-VEIAA-------TAGEGLAKIENE-FFNLALFXIKLPDMEGTELLEKAHKLR 73 (132)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT--CE-EEEES-------SHHHHHHHHHHS-CCSEEEECSBCSSSBHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCC--ce-EEEeC-------CHHHHHHHHhcC-CCCEEEEecCCCCCchHHHHHHHHhhC
Confidence 57777777777777767676554 32 22222 335777777654 246676665533457889999998755
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
...|||++- +.... .....+ -++|+ ...-+.++|...++.+..
T Consensus 74 ~~~~ii~~s-~~~~~----------------------~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~ 120 (132)
T 3crn_A 74 PGMKKIMVT-GYASL----------------------ENSVFS-LNAGADAYIMKPVNPRDLLEKIKEKLD 120 (132)
T ss_dssp TTSEEEEEE-SCCCH----------------------HHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEe-ccccH----------------------HHHHHH-HhccchhhccCCCCHHHHHHHHHHHHh
Confidence 667888772 22111 222223 34665 234578888888876654
No 403
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=27.79 E-value=2.5e+02 Score=22.98 Aligned_cols=76 Identities=12% Similarity=0.057 Sum_probs=52.9
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHH
Q 007327 165 YRPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244 (608)
Q Consensus 165 ~~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~ 244 (608)
....+|-+|...-.....+...+.+.|+- +... -+..+.++.+.+.+ ..+|+ +. -.++.++++.+
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~---v~~~-------~~~~~al~~l~~~~-~dlvi--~~--~~~g~~~~~~l 80 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGFM---ADVT-------ESLEDGEYLMDIRN-YDLVM--VS--DKNALSFVSRI 80 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTCE---EEEE-------SCHHHHHHHHHHSC-CSEEE--EC--STTHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCcE---EEEe-------CCHHHHHHHHHcCC-CCEEE--Ec--CccHHHHHHHH
Confidence 35668999999998888888888775542 2222 23457777776643 45555 44 46788999999
Q ss_pred HhCCC-CCCEEEE
Q 007327 245 KQGKV-NKPVVAW 256 (608)
Q Consensus 245 r~a~~-~KPVvvl 256 (608)
++. . ..|||++
T Consensus 81 ~~~-~~~~~ii~l 92 (137)
T 2pln_A 81 KEK-HSSIVVLVS 92 (137)
T ss_dssp HHH-STTSEEEEE
T ss_pred Hhc-CCCccEEEE
Confidence 886 5 6788887
No 404
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=27.69 E-value=56 Score=32.11 Aligned_cols=54 Identities=24% Similarity=0.320 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----------c--------cH---HHH----HHHHHhC-CCCCCEEEEEeCCCc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----------R--------DE---YSL----VEALKQG-KVNKPVVAWVSGTCA 262 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----------~--------~~---~~f----~~~~r~a-~~~KPVvvlk~Grs~ 262 (608)
+.+.++.+.+||++|+|++..+ |- . +. +++ .+..++. ...||||+..-|..-
T Consensus 38 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~ 116 (263)
T 3l3s_A 38 LHDALRRAMGDDHVHVLVIHGP-GRIFCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIAT 116 (263)
T ss_dssp HHHHHHHHHTCTTCCEEEEECC-SSEEECCSCSCCCCC-----CCSHHHHHHHHHHHHHHHHHHHTCSSCEEEEESSEEE
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCCccCCcChHHHhhccccccccHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEE
Confidence 4577788888999999999776 41 0 11 122 2233333 378999999887765
Q ss_pred cC
Q 007327 263 RL 264 (608)
Q Consensus 263 ~g 264 (608)
.|
T Consensus 117 Gg 118 (263)
T 3l3s_A 117 AA 118 (263)
T ss_dssp TH
T ss_pred HH
Confidence 43
No 405
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=27.69 E-value=1.4e+02 Score=29.63 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=42.1
Q ss_pred cccCCHHHHhhcCCCccEEEEeccCh----hcHHHHHHHhcCCCCCEEEEecC----C--CCHHHHHHHHHHHHhCCCeE
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~----~~~~~~le~~~~~gv~~~viis~----G--f~e~~~~~l~~~a~~~g~rv 133 (608)
|+|.+..++.... ..+...+.+... -.++++.+.+. .+++.+++.+- | ++....++|.++|+++|+.+
T Consensus 113 ~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~l 190 (375)
T 3op7_A 113 PTYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLIR-PTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYI 190 (375)
T ss_dssp SSCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHHHCC-TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEE
T ss_pred CCchhHHHHHHHc-CCEEEEEeccccCCCCCCHHHHHHhhc-cCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 5566555554433 245554444321 13455545554 68887776532 3 24446889999999999987
Q ss_pred EcCC
Q 007327 134 IGPA 137 (608)
Q Consensus 134 lGPN 137 (608)
+==+
T Consensus 191 i~De 194 (375)
T 3op7_A 191 LSDE 194 (375)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6433
No 406
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=27.67 E-value=2e+02 Score=27.79 Aligned_cols=43 Identities=7% Similarity=0.116 Sum_probs=28.3
Q ss_pred CCHHHHhhcCCCccEEEEeccChh-----------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~~-----------------~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. ++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 55 ~~~~~~~~---~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 55 DDIKDYLK---GAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp SCCHHHHT---TCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHhc---CCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 56666654 4798876543210 1234778888889998888887
No 407
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=27.58 E-value=18 Score=35.53 Aligned_cols=53 Identities=23% Similarity=0.316 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHHHHHH---------------HHHhC--CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSLVE---------------ALKQG--KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~~f~~---------------~~r~a--~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++..+ |- .|-..|.. ..++. ...||||+..-|..-.
T Consensus 44 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~G 118 (258)
T 3lao_A 44 LALAMGEYERSEESRCAVLFAH-GEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWT 118 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCHHHHGGGCBTTBCCCCTTCCCTTSCSSSCCCSCEEEEECSEEET
T ss_pred HHHHHHHHhhCCCcEEEEEECC-CCCeecCcCHHHHhhccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeEh
Confidence 4567777888999999999888 51 22222221 12233 3689999998777654
No 408
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=27.29 E-value=3.7e+02 Score=26.46 Aligned_cols=134 Identities=9% Similarity=-0.063 Sum_probs=76.7
Q ss_pred ccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCC
Q 007327 86 SSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLY 165 (608)
Q Consensus 86 vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~ 165 (608)
.|....+++.++.+.+.||...|++...+...+-+.+.+..++++-|+.| ++. + .|
T Consensus 50 ~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r~~G-----va~-----v----------dp---- 105 (303)
T 4d9a_A 50 LPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARG-----IAV-----V----------DP---- 105 (303)
T ss_dssp CBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEE-----EEC-----C----------CT----
T ss_pred cCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCcEEE-----EEE-----e----------CC----
Confidence 34556688888999889999999998755434445666655666545443 220 0 01
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCC-ceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTD-GIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~-G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~ 244 (608)
. . + .+-++.+.+.|+ |+......+... .++..++...+..=.+==.+.+++ +..+...+.+.+
T Consensus 106 --~-~-----~----~~eL~~l~~~G~rGvR~~~~~~~~~--~~~~~~~~~~~~~l~~gl~v~l~~--~~~~l~~l~~~~ 169 (303)
T 4d9a_A 106 --A-I-----D----EAELAALHEGGMRGIRFNFLKRLVD--DAPKDKFLEVAGRLPAGWHVVIYF--EADILEELRPFM 169 (303)
T ss_dssp --T-C-----C----HHHHHHHHHTTEEEEEEECCTTTCS--CCCHHHHHHHHTSCCTTCEEEEEC--CGGGHHHHHHHH
T ss_pred --C-C-----C----HHHHHHHHHCCCCEEEeecccCCcc--ccCHHHHHHHHHHHhcCCEEEEec--ccccHHHHHHHH
Confidence 0 0 0 123345555554 555555443223 456666666665433312233343 456677888888
Q ss_pred HhCCCCCCEEEEEeCCC
Q 007327 245 KQGKVNKPVVAWVSGTC 261 (608)
Q Consensus 245 r~a~~~KPVvvlk~Grs 261 (608)
++. +.+||+=-.|+-
T Consensus 170 ~~~--~~~iVidH~G~p 184 (303)
T 4d9a_A 170 DAI--PVPIVIDHMGRP 184 (303)
T ss_dssp HHC--SSCEEEGGGGCC
T ss_pred HHC--CCcEEEeCCCCC
Confidence 886 678887555543
No 409
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=27.27 E-value=1.5e+02 Score=27.43 Aligned_cols=44 Identities=11% Similarity=-0.034 Sum_probs=28.2
Q ss_pred cCCHHHHhhcCCCccEEEEeccChh--------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRS--------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~--------------~~~~~le~~~~~gv~~~viis~ 112 (608)
..++.++.. ++|.+|-+..... ....+++.|.+.+++.+|.+|+
T Consensus 75 ~~~~~~~~~---~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 75 LDDYASAFQ---GHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GGGGGGGGS---SCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHhc---CCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 344544433 4899887765421 1235677787788888888876
No 410
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=27.24 E-value=2.3e+02 Score=22.41 Aligned_cols=76 Identities=16% Similarity=0.119 Sum_probs=47.0
Q ss_pred EEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCC
Q 007327 170 VGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKV 249 (608)
Q Consensus 170 valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~ 249 (608)
|-+|..+-.....+...+.+.|. . +.. --+..+.++++.+.+ ..++++-+.....++-++++.+++...
T Consensus 3 ilivdd~~~~~~~l~~~l~~~g~--~-v~~-------~~~~~~a~~~~~~~~-~dlil~D~~l~~~~g~~~~~~l~~~~~ 71 (121)
T 2pl1_A 3 VLVVEDNALLRHHLKVQIQDAGH--Q-VDD-------AEDAKEADYYLNEHI-PDIAIVDLGLPDEDGLSLIRRWRSNDV 71 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTC--E-EEE-------ESSHHHHHHHHHHSC-CSEEEECSCCSSSCHHHHHHHHHHTTC
T ss_pred EEEEeCcHHHHHHHHHHHhhcCC--E-EEE-------eCCHHHHHHHHhccC-CCEEEEecCCCCCCHHHHHHHHHhcCC
Confidence 45566666666666666665543 2 222 223456777776542 466666555334578899999987656
Q ss_pred CCCEEEE
Q 007327 250 NKPVVAW 256 (608)
Q Consensus 250 ~KPVvvl 256 (608)
..|||++
T Consensus 72 ~~~ii~~ 78 (121)
T 2pl1_A 72 SLPILVL 78 (121)
T ss_dssp CSCEEEE
T ss_pred CCCEEEE
Confidence 7899887
No 411
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=27.22 E-value=48 Score=31.97 Aligned_cols=21 Identities=0% Similarity=-0.048 Sum_probs=12.4
Q ss_pred EEEEEcCCch----HHHHHhhCccc
Q 007327 12 QALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 12 ~avv~g~~~~----~~~~l~~~~~~ 32 (608)
+++|-|++|. +++.|++.||.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~ 31 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYD 31 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCE
Confidence 4444465554 77777776653
No 412
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=27.09 E-value=1.8e+02 Score=29.93 Aligned_cols=110 Identities=11% Similarity=0.033 Sum_probs=0.0
Q ss_pred cEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeCCCCCCcccc-----ccCceeecccccC-CHHHHhhcCCCcc
Q 007327 11 TQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKL-----FFGQEEIAIPVHS-TVEAACAAHPMAD 80 (608)
Q Consensus 11 s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~-----~~g~ev~G~~~y~-sv~~i~~~~p~vD 80 (608)
+++|| |++|. ++|.|.++. ..+++...+ ....|+.-. +. ..+++-+ +.+++.. ++|
T Consensus 15 ~V~Iv-GAtG~vG~ellrlL~~hP-----~~el~~l~S-~~~aG~~~~~~~p~~~----~~l~~~~~~~~~~~~---~~D 80 (351)
T 1vkn_A 15 RAGII-GATGYTGLELVRLLKNHP-----EAKITYLSS-RTYAGKKLEEIFPSTL----ENSILSEFDPEKVSK---NCD 80 (351)
T ss_dssp EEEEE-STTSHHHHHHHHHHHHCT-----TEEEEEEEC-STTTTSBHHHHCGGGC----CCCBCBCCCHHHHHH---HCS
T ss_pred EEEEE-CCCCHHHHHHHHHHHcCC-----CcEEEEEeC-cccccCChHHhChhhc----cCceEEeCCHHHhhc---CCC
Q ss_pred EEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHH-----------------------HHHHHHHhCCCeEEcCC
Q 007327 81 VFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTK-----------------------QLIAYARSNNKVVIGPA 137 (608)
Q Consensus 81 lavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~-----------------------~l~~~a~~~g~rvlGPN 137 (608)
+++.|+|... .......+ +|++ +|=.|+-|.-.+.+ |+-+-.-+..-.|--||
T Consensus 81 vvf~alp~~~-s~~~~~~~--~g~~-VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e~i~~a~iIANPg 156 (351)
T 1vkn_A 81 VLFTALPAGA-SYDLVREL--KGVK-IIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKNAQVVGNPG 156 (351)
T ss_dssp EEEECCSTTH-HHHHHTTC--CSCE-EEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHHHHTTCSEEECCC
T ss_pred EEEECCCcHH-HHHHHHHh--CCCE-EEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHHHhccCCEEeCCC
Q ss_pred c
Q 007327 138 T 138 (608)
Q Consensus 138 c 138 (608)
|
T Consensus 157 C 157 (351)
T 1vkn_A 157 C 157 (351)
T ss_dssp H
T ss_pred h
No 413
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=27.08 E-value=10 Score=38.52 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=56.8
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhC-cccCCCCCCcEEEEeCCCCCCccccccCceeec--ccccCCHHHHhhcCCCccEE
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDF-DFLCGRETPSVAGIINPGAEGFQKLFFGQEEIA--IPVHSTVEAACAAHPMADVF 82 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~-~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G--~~~y~sv~~i~~~~p~vDla 82 (608)
+.++++||| |..++ +++++.+. ++ ..|...+ +.... ...+. +-.| +..+.+++++.. +.|++
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~------~~V~v~d-r~~~~-~~~l~--~~~~~~~~~~~~~~e~v~---~aDiV 200 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSF------KEVRIWN-RTKEN-AEKFA--DTVQGEVRVCSSVQEAVA---GADVI 200 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCC------SEEEEEC-SSHHH-HHHHH--HHSSSCCEECSSHHHHHT---TCSEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCC------cEEEEEc-CCHHH-HHHHH--HHhhCCeEEeCCHHHHHh---cCCEE
Confidence 456788885 22233 77777664 43 2465665 42221 11110 1113 567889988765 47999
Q ss_pred EEeccChhcHHHHHH-HhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEc
Q 007327 83 INFSSFRSAAASSMA-ALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 83 vi~vp~~~~~~~~le-~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlG 135 (608)
++++|... .+++ .+-+.|. .++.+ +.+... .+++.+.+++.+..++.
T Consensus 201 i~atp~~~---~v~~~~~l~~g~-~vi~~-g~~~p~-~~el~~~~~~~g~~~vD 248 (312)
T 2i99_A 201 ITVTLATE---PILFGEWVKPGA-HINAV-GASRPD-WRELDDELMKEAVLYVD 248 (312)
T ss_dssp EECCCCSS---CCBCGGGSCTTC-EEEEC-CCCSTT-CCSBCHHHHHHSEEEES
T ss_pred EEEeCCCC---cccCHHHcCCCc-EEEeC-CCCCCC-ceeccHHHHhcCEEEEC
Confidence 99999642 3332 2332442 33333 333332 24555555666666665
No 414
>3vsj_A 2-amino-5-chlorophenol 1,6-dioxygenase alpha SUBU; CNBC,oxidoreductase, 2-His-1-carboxylate facial triad motif, extradiol dioxygenase,; HET: 2XP; 2.30A {Comamonas testosteroni} PDB: 3vsh_A 3vsi_A* 3vsg_A*
Probab=26.87 E-value=4.4e+02 Score=25.51 Aligned_cols=140 Identities=10% Similarity=-0.082 Sum_probs=81.3
Q ss_pred cChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCC-ccEEEEEEecCCccHH---HHHHHHHhCC--
Q 007327 175 KSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQ-VKMMVVLGELGGRDEY---SLVEALKQGK-- 248 (608)
Q Consensus 175 QSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~-T~~I~ly~E~g~~~~~---~f~~~~r~a~-- 248 (608)
-+-.++..+.+.+.+.|+......+..-.. |=+..=-|.++..+-+ .++|-+.+- ...+++ +|-++++++.
T Consensus 88 gd~~la~~i~~~~~~~g~~~~~~~~~~~~l--DHg~~vpl~~l~~~~~~~pvv~i~~~-~~~~~~~~~~lG~al~~~~~~ 164 (271)
T 3vsj_A 88 ADTALAEACVTSSPLHGVHARGVNYDGFPI--DTGTITACTLMGIGTDAFPLVVGSNN-LYHSGEITEKLAALAVDCAKD 164 (271)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEECCTTCCC--CHHHHHHHHHHTCSSSSSCEEEEEEE-TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCcEEeecCCCCCc--chhHHHHHHHHhccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 467788889988888888764433222222 3334444566666555 889888876 566665 4444555432
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHH-HhcCC
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFESAIKETFEKL-VEEGK 322 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~~~~~~~~~~-~~~G~ 322 (608)
+++.|+++-+|-..--+....-.. .-.+.....+..||..+.+ .+...|+++|.+....+..+. ++||.
T Consensus 165 ~~~~vlii~SGdlsH~l~~~~~~~---~~~~~~~~~a~~fD~~~~~--~l~~~D~~~L~~~~~~~~~~a~g~~G~ 234 (271)
T 3vsj_A 165 QNKRVAVVGVGGLSGSLFREEIDP---REDRIANEEDDKWNRRVLK--LIEAGDVSALREAMPVYAKEARVDMGF 234 (271)
T ss_dssp TTCCEEEEEECCSCCCCCSSCCCG---GGCCCSCHHHHHHHHHHHH--HHHHTCHHHHHHHHHHHHHHTTCGGGG
T ss_pred cCCCEEEEEECccccCCcccCCCC---CCCCCCCcchHHHHHHHHH--HHHCCCHHHHHhcCHHHHHHhccCCcH
Confidence 478899987775432210000000 0000111345777777765 355678999998887777665 55544
No 415
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=26.80 E-value=2.3e+02 Score=26.86 Aligned_cols=116 Identities=12% Similarity=0.142 Sum_probs=76.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|--+-.....+...+.+.|+- +....|. .+.++++.+.+ ..+|++-++....+|.++++.+|+
T Consensus 129 ~~~ILivdd~~~~~~~l~~~L~~~g~~---v~~a~~~-------~eal~~l~~~~-~dlvl~D~~mp~~~G~~l~~~ir~ 197 (254)
T 2ayx_A 129 DMMILVVDDHPINRRLLADQLGSLGYQ---CKTANDG-------VDALNVLSKNH-IDIVLSDVNMPNMDGYRLTQRIRQ 197 (254)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTSE---EEEECCS-------HHHHHHHHHSC-CSEEEEEESSCSSCCHHHHHHHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCE---EEEECCH-------HHHHHHHHhCC-CCEEEEcCCCCCCCHHHHHHHHHh
Confidence 446999999998888887778776542 3333332 47777777654 678888887445678899999988
Q ss_pred CCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHHH
Q 007327 247 GKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEKL 317 (608)
Q Consensus 247 a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~~ 317 (608)
.....|||++-+... . ... .-+.++|+. -.-+.++|...++.+..+.
T Consensus 198 ~~~~~piI~lt~~~~-------------------~----~~~-~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~~~ 248 (254)
T 2ayx_A 198 LGLTLPVIGVTANAL-------------------A----EEK-QRCLESGMDSCLSKPVTLDVIKQTLTLYAERV 248 (254)
T ss_dssp HHCCSCEEEEESSTT-------------------S----HHH-HHHHHCCCEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEECCCC-------------------H----HHH-HHHHHcCCceEEECCCCHHHHHHHHHHHHHHh
Confidence 656789998832111 1 122 334456752 3457888888887766543
No 416
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=26.67 E-value=2.5e+02 Score=22.56 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=68.2
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC-
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG- 247 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a- 247 (608)
+|-+|..+-.....+...+.+.| +..+... -+..+.++++.+. ...+|++-++....++.++++.+|+.
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~~--~~~v~~~-------~~~~~a~~~~~~~-~~dlvi~D~~l~~~~g~~l~~~l~~~~ 75 (128)
T 1jbe_A 6 KFLVVDDFSTMRRIVRNLLKELG--FNNVEEA-------EDGVDALNKLQAG-GYGFVISDWNMPNMDGLELLKTIRAXX 75 (128)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTT--CCCEEEE-------SSHHHHHHHHTTC-CCCEEEEESCCSSSCHHHHHHHHHC--
T ss_pred EEEEECCCHHHHHHHHHHHHHcC--CcEEEee-------CCHHHHHHHHHhc-CCCEEEEeCCCCCCCHHHHHHHHHhhc
Confidence 58888888777777766666544 3222222 2345777777654 35677766653345788999999873
Q ss_pred -CCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHH
Q 007327 248 -KVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 316 (608)
Q Consensus 248 -~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 316 (608)
....|||++-. .... .....+ -++|+. ..-+.++|...++.+..+
T Consensus 76 ~~~~~~ii~~s~-~~~~----------------------~~~~~~-~~~ga~~~l~KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 76 AMSALPVLMVTA-EAKK----------------------ENIIAA-AQAGASGYVVKPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp CCTTCCEEEEES-SCCH----------------------HHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEec-CccH----------------------HHHHHH-HHhCcCceeecCCCHHHHHHHHHHHHHH
Confidence 24678888731 1111 222233 345542 345788888888776654
No 417
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=26.66 E-value=2.5e+02 Score=22.55 Aligned_cols=77 Identities=8% Similarity=0.134 Sum_probs=52.1
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.........+...+.+.|.-+ ... -+..+.++.+.+. ...+|++-+.....+|-++++.+|+.
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~al~~~~~~-~~dlii~D~~~p~~~g~~~~~~lr~~- 71 (120)
T 3f6p_A 4 KILVVDDEKPIADILEFNLRKEGYEV---HCA-------HDGNEAVEMVEEL-QPDLILLDIMLPNKDGVEVCREVRKK- 71 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEE---EEE-------SSHHHHHHHHHTT-CCSEEEEETTSTTTHHHHHHHHHHTT-
T ss_pred eEEEEECCHHHHHHHHHHHHhCCEEE---EEe-------CCHHHHHHHHhhC-CCCEEEEeCCCCCCCHHHHHHHHHhc-
Confidence 57788888877777777777665432 222 2345778877654 35677776664455788999999874
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 72 ~~~~ii~~t 80 (120)
T 3f6p_A 72 YDMPIIMLT 80 (120)
T ss_dssp CCSCEEEEE
T ss_pred CCCCEEEEE
Confidence 467988874
No 418
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=26.66 E-value=74 Score=31.17 Aligned_cols=54 Identities=17% Similarity=0.056 Sum_probs=32.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecC--C----ccHH---------------H----HHHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELG--G----RDEY---------------S----LVEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g--~----~~~~---------------~----f~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++-.+ | + .|-. + +.+..++. ...||||+..-|..-.
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-g~~FF~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 114 (263)
T 3lke_A 36 LLEAIRAGNNETSIHSIILQSK-HRAYFSSGPRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYG 114 (263)
T ss_dssp HHHHHHHHHHCSSCCEEEEEES-CTTEEECBSCHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHTCSSEEEEEECSEEET
T ss_pred HHHHHHHHhcCCCeEEEEEEcC-CCceEecCcCHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeH
Confidence 4466677777888888877776 3 1 1111 1 12223333 3789999999887665
Q ss_pred C
Q 007327 264 L 264 (608)
Q Consensus 264 g 264 (608)
|
T Consensus 115 g 115 (263)
T 3lke_A 115 G 115 (263)
T ss_dssp H
T ss_pred H
Confidence 3
No 419
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=26.51 E-value=2.8e+02 Score=26.46 Aligned_cols=172 Identities=7% Similarity=-0.074 Sum_probs=87.3
Q ss_pred cCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcc----cc
Q 007327 66 HSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATV----GG 141 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~----Gi 141 (608)
...+++...+. ..++.+............++.+.+.++.++|+.+....+ +..+.+++.|+.++-=|.. ++
T Consensus 29 ~~gi~~~a~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~----~~~~~l~~~~iPvV~~~~~~~~~~~ 103 (294)
T 3qk7_A 29 ISWIGIELGKR-GLDLLLIPDEPGEKYQSLIHLVETRRVDALIVAHTQPED----FRLQYLQKQNFPFLALGRSHLPKPY 103 (294)
T ss_dssp HHHHHHHHHHT-TCEEEEEEECTTCCCHHHHHHHHHTCCSEEEECSCCSSC----HHHHHHHHTTCCEEEESCCCCSSCC
T ss_pred HHHHHHHHHHC-CCEEEEEeCCChhhHHHHHHHHHcCCCCEEEEeCCCCCh----HHHHHHHhCCCCEEEECCCCCCCCC
Confidence 33445544445 377777655432223567777777899999987765433 3455667788875522211 11
Q ss_pred --cccCcccccccCCcccccccccCCCCCcEEEEecChhHH------HHHHHHHHhcCCcee--EEeecCCCCCCCCCHH
Q 007327 142 --IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGMS------NELYNTIARVTDGIY--EGIAIGGDVFPGSTLS 211 (608)
Q Consensus 142 --~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l~------~~~~~~~~~~g~G~s--~~vs~Gn~~~~dv~~~ 211 (608)
+..+....+ -.....+- .....+|++++.+.... ....+.+.+.|+.+. .++...... +-...
T Consensus 104 ~~V~~D~~~~~---~~a~~~L~--~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~--~~~~~ 176 (294)
T 3qk7_A 104 AWFDFDNHAGA---SLAVKRLL--ELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAGLMPLAGYLQKADPTR--PGGYL 176 (294)
T ss_dssp EEEEECHHHHH---HHHHHHHH--HTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTTCCCCTTCEEEECSSH--HHHHH
T ss_pred CEEEcChHHHH---HHHHHHHH--HCCCceEEEEeCCcccchHHHHHHHHHHHHHHCCCCCChhHeecCCCCH--HHHHH
Confidence 101100000 00000000 12456899997654221 223455666676542 233332222 22334
Q ss_pred HHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 212 DHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 212 d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
-+-++|...|+..+|... +-.....+++++++...+.|
T Consensus 177 ~~~~~l~~~~~~~ai~~~---nd~~A~g~~~al~~~G~~vP 214 (294)
T 3qk7_A 177 AASRLLALEVPPTAIITD---CNMLGDGVASALDKAGLLGG 214 (294)
T ss_dssp HHHHHHHSSSCCSEEEES---SHHHHHHHHHHHHHTTCSST
T ss_pred HHHHHHcCCCCCcEEEEC---CHHHHHHHHHHHHHcCCCCC
Confidence 455666667777777654 21223567888888655444
No 420
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=26.48 E-value=2.3e+02 Score=27.53 Aligned_cols=19 Identities=0% Similarity=0.051 Sum_probs=12.5
Q ss_pred HHHHHhcCCCCCEEEEecC
Q 007327 94 SSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~ 112 (608)
.++++|.+.|++.+|.+|+
T Consensus 100 ~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 100 CLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp HHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 4566666667777776665
No 421
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=26.19 E-value=1.6e+02 Score=28.79 Aligned_cols=113 Identities=14% Similarity=0.115 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC--h----hHHHHHHH
Q 007327 112 EGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS--G----GMSNELYN 185 (608)
Q Consensus 112 ~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS--G----~l~~~~~~ 185 (608)
.+++|...+++.+.+++.|-+ ||... . .|. .-+...||++... . .+...+-+
T Consensus 27 ~~vs~~tr~rV~~aa~~lgY~---pn~~a-----r-~l~-------------~~~~~~Ig~i~~~~~~~~~~~~~~gi~~ 84 (332)
T 2hsg_A 27 PNVKPSTRKKVLETIERLGYR---PNAVA-----R-GLA-------------SKKTTTVGVIIPDISNIFYAELARGIED 84 (332)
T ss_dssp TTSCHHHHHHHHHHHHHHTCC---SCHHH-----H-HHT-------------TC-CCEEEEEEC--CCSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC---cCHHH-----H-HHH-------------hCCCCEEEEEeCCCCCcHHHHHHHHHHH
Confidence 368888899999999997754 55321 0 110 0133456666532 2 23334445
Q ss_pred HHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 186 ~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
.+.+.|.-+..+ .+.++. -...++++.+. ...+..|++..- ... ...++.+++ .+.|||++
T Consensus 85 ~a~~~g~~~~~~-~~~~~~---~~~~~~~~~l~-~~~vdgiI~~~~-~~~--~~~~~~l~~--~~iPvV~~ 145 (332)
T 2hsg_A 85 IATMYKYNIILS-NSDQNQ---DKELHLLNNML-GKQVDGIIFMSG-NVT--EEHVEELKK--SPVPVVLA 145 (332)
T ss_dssp HHHHHTCEEEEE-ECCSHH---HHHHHHHHHTS-CCSSCCEEECCS-SCC--HHHHHHHTT--SSSCEEEE
T ss_pred HHHHcCCEEEEE-eCCCCh---HHHHHHHHHHH-hCCCcEEEEecC-CCC--HHHHHHHHh--CCCCEEEE
Confidence 556666554432 222221 12345677665 346777777632 222 234444432 67899987
No 422
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=26.19 E-value=87 Score=30.39 Aligned_cols=53 Identities=25% Similarity=0.278 Sum_probs=30.0
Q ss_pred HHHHHHhhcCCCccEEEEEEecCC-----------------ccHH-----H-HHHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 211 SDHILRFNNIPQVKMMVVLGELGG-----------------RDEY-----S-LVEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 211 ~d~l~~l~~Dp~T~~I~ly~E~g~-----------------~~~~-----~-f~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
.+.++.+.+||++|+|++-.+ |- .+.. . +.+..++.. ..||||+..-|..-.|
T Consensus 32 ~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~Gg 108 (253)
T 1uiy_A 32 LQALDDLEADPGVRAVVLTGR-GKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAG 108 (253)
T ss_dssp HHHHHHHHHCTTCCEEEEEES-SSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred HHHHHHHHhCCCceEEEEECC-CCCcccCcChHHHHhcccCCchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeHH
Confidence 455566666777777777665 31 0010 1 222333332 6899999988766543
No 423
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=26.17 E-value=1.5e+02 Score=29.70 Aligned_cols=69 Identities=12% Similarity=0.112 Sum_probs=39.2
Q ss_pred cccCCHHHHhhcCCCccEEEEeccCh----hcHHHHHHHhcCCCCCEEEEec----CC--CCHHHHHHHHHHHHhCCCeE
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFR----SAAASSMAALKQPTIRVVAIIA----EG--VPEADTKQLIAYARSNNKVV 133 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~----~~~~~~le~~~~~gv~~~viis----~G--f~e~~~~~l~~~a~~~g~rv 133 (608)
|+|++..+..... ..++..+.+... ..++++.+.+. .+++.+++.+ .| +++...++|.++|+++|+.+
T Consensus 119 ~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~l 196 (389)
T 1gd9_A 119 PAFVSYAPAVILA-GGKPVEVPTYEEDEFRLNVDELKKYVT-DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIV 196 (389)
T ss_dssp SCCTTHHHHHHHH-TCEEEEEECCGGGTTCCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCchhHHHHHHHC-CCEEEEeccCCccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 5666665544322 245444443321 13445544554 5676655532 34 24457889999999999876
Q ss_pred E
Q 007327 134 I 134 (608)
Q Consensus 134 l 134 (608)
+
T Consensus 197 i 197 (389)
T 1gd9_A 197 I 197 (389)
T ss_dssp E
T ss_pred E
Confidence 6
No 424
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=26.16 E-value=1.2e+02 Score=29.87 Aligned_cols=99 Identities=10% Similarity=-0.031 Sum_probs=47.6
Q ss_pred CCCCCCcEEEEEcCCch----HHHHHhhCcccCCCCCCcEEEEeC-CCCCCc-cccccCce--eecccccCCHHHHhhcC
Q 007327 5 QLFSKTTQALFYNYKQL----PIQRMLDFDFLCGRETPSVAGIIN-PGAEGF-QKLFFGQE--EIAIPVHSTVEAACAAH 76 (608)
Q Consensus 5 ~l~~p~s~avv~g~~~~----~~~~l~~~~~~~~~g~~~v~~v~~-p~~~~~-~~~~~g~e--v~G~~~y~sv~~i~~~~ 76 (608)
..++-+++.|. |++|. +++.|++.||. |.++.- +..... ...+.+-+ ...+.-..++.++....
T Consensus 16 ~~~~~~~vlVT-GasG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~ 87 (330)
T 2pzm_A 16 PRGSHMRILIT-GGAGCLGSNLIEHWLPQGHE-------ILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF 87 (330)
T ss_dssp STTTCCEEEEE-TTTSHHHHHHHHHHGGGTCE-------EEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCEEEEE-CCCCHHHHHHHHHHHHCCCE-------EEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc
Confidence 45666766666 44433 78888887653 444441 211100 00010100 01222223344444321
Q ss_pred CCccEEEEeccChh--------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 77 PMADVFINFSSFRS--------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 77 p~vDlavi~vp~~~--------------~~~~~le~~~~~gv~~~viis~ 112 (608)
++|.+|-+..... ....++++|.+.|++.+|.+|+
T Consensus 88 -~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 88 -KPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp -CCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred -CCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 2688776554211 1235667777677877777765
No 425
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=26.14 E-value=1.1e+02 Score=31.14 Aligned_cols=75 Identities=8% Similarity=-0.049 Sum_probs=42.1
Q ss_pred cccCCHHHHhhcCCCccEEEEeccChh---cHHHHHHHhcCCCCCEEEEecC----C--CCHHHHHHHHHHHHhCCCeEE
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFRS---AAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~~---~~~~~le~~~~~gv~~~viis~----G--f~e~~~~~l~~~a~~~g~rvl 134 (608)
|+|.+........ ..++..+.+.... .++++.+.+...+++.+++.+- | ++....++|.++|+++|+.++
T Consensus 141 p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 219 (437)
T 3g0t_A 141 PGFNLNKLQCRIL-GQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219 (437)
T ss_dssp SCCHHHHHHHHHH-TCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCcHhHHHHHHHc-CCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEE
Confidence 3444444433322 2455544443211 2445555563567887776432 3 244568889999999999877
Q ss_pred cCCcc
Q 007327 135 GPATV 139 (608)
Q Consensus 135 GPNc~ 139 (608)
==++.
T Consensus 220 ~De~~ 224 (437)
T 3g0t_A 220 EDLAY 224 (437)
T ss_dssp EECTT
T ss_pred EEcch
Confidence 43333
No 426
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=26.13 E-value=66 Score=31.62 Aligned_cols=54 Identities=19% Similarity=0.210 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC------------c------cH---HHH----HHHHHhCC-CCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG------------R------DE---YSL----VEALKQGK-VNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~------------~------~~---~~f----~~~~r~a~-~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++-.+ |- . .. ..+ .+..++.. ..||||+..-|..-.
T Consensus 35 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 113 (269)
T 1nzy_A 35 VTDALNRAEEDDSVGAVMITGA-EDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAG 113 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEET
T ss_pred HHHHHHHHhhCCCeeEEEEECC-CCCcccCcCHHHHhhcccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeec
Confidence 4567778888999999999886 41 0 11 122 22333332 789999998776554
Q ss_pred C
Q 007327 264 L 264 (608)
Q Consensus 264 g 264 (608)
|
T Consensus 114 g 114 (269)
T 1nzy_A 114 G 114 (269)
T ss_dssp H
T ss_pred H
Confidence 3
No 427
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=26.06 E-value=89 Score=30.57 Aligned_cols=54 Identities=22% Similarity=0.407 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------cc---HHHHHH----HHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--------------RD---EYSLVE----ALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--------------~~---~~~f~~----~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- .. .+.+.+ ..++. ...||||+..-|..-.|
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 112 (261)
T 3pea_A 37 VTELIDQVEKDDNIRVVVIHGE-GRFFSAGADIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGG 112 (261)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGSSTTCCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceeCCcCHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehH
Confidence 4577888889999999999887 41 11 112222 22332 37899999987766543
No 428
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=25.98 E-value=1.6e+02 Score=25.49 Aligned_cols=81 Identities=10% Similarity=-0.056 Sum_probs=53.2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
.=+|-+|.-.-.....+...+.+.+ ++..+... .+..+.++.+.+.+ ..+|++-++....++-++++.+|+
T Consensus 25 ~~~ILivdd~~~~~~~l~~~L~~~~-~~~~v~~~-------~~~~~al~~l~~~~-~dlvilD~~l~~~~g~~l~~~lr~ 95 (164)
T 3t8y_A 25 VIRVLVVDDSAFMRMVLKDIIDSQP-DMKVVGFA-------KDGLEAVEKAIELK-PDVITMDIEMPNLNGIEALKLIMK 95 (164)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTST-TEEEEEEE-------SSHHHHHHHHHHHC-CSEEEECSSCSSSCHHHHHHHHHH
T ss_pred ccEEEEEcCCHHHHHHHHHHHhcCC-CeEEEEec-------CCHHHHHHHhccCC-CCEEEEeCCCCCCCHHHHHHHHHh
Confidence 3479999999888877777776544 33322122 23456777765543 456776666455678999999988
Q ss_pred CCCCCCEEEEE
Q 007327 247 GKVNKPVVAWV 257 (608)
Q Consensus 247 a~~~KPVvvlk 257 (608)
... .|||++-
T Consensus 96 ~~~-~~ii~~s 105 (164)
T 3t8y_A 96 KAP-TRVIMVS 105 (164)
T ss_dssp HSC-CEEEEEE
T ss_pred cCC-ceEEEEe
Confidence 554 7877763
No 429
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=25.91 E-value=2.6e+02 Score=22.58 Aligned_cols=112 Identities=13% Similarity=0.122 Sum_probs=68.5
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|.........+...+. .|.-+ .. -.+..+.++.+.+.+ ..+|++-+.....++.++++.+|+.
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~-~~~~v---~~-------~~~~~~a~~~l~~~~-~dlvi~d~~l~~~~g~~~~~~l~~~ 72 (133)
T 3nhm_A 5 PKVLIVENSWTMRETLRLLLS-GEFDC---TT-------AADGASGLQQALAHP-PDVLISDVNMDGMDGYALCGHFRSE 72 (133)
T ss_dssp CEEEEECSCHHHHHHHHHHHT-TTSEE---EE-------ESSHHHHHHHHHHSC-CSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred CEEEEEcCCHHHHHHHHHHHh-CCcEE---EE-------ECCHHHHHHHHhcCC-CCEEEEeCCCCCCCHHHHHHHHHhC
Confidence 468888888887777766655 44322 11 234567788776653 5677776664456789999999986
Q ss_pred C--CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHH
Q 007327 248 K--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 316 (608)
Q Consensus 248 ~--~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 316 (608)
. ...|||++-. ..... . ....++|+ ...-+.++|...++.++..
T Consensus 73 ~~~~~~pii~~s~-~~~~~--~----------------------~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 73 PTLKHIPVIFVSG-YAPRT--E----------------------GPADQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TTTTTCCEEEEES-CCC-----------------------------TTSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeC-CCcHh--H----------------------HHHhhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 3 4678888742 22211 1 11122332 2455788888888877764
No 430
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=25.85 E-value=70 Score=31.31 Aligned_cols=54 Identities=19% Similarity=0.243 Sum_probs=34.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-------------ccHH---HH----HHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-------------RDEY---SL----VEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-------------~~~~---~f----~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- .++. ++ .+..++. ...||||+..-|..-.|
T Consensus 48 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GG 122 (257)
T 1szo_A 48 LAYCFHDIACDRENKVVILTGT-GPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVTNA 122 (257)
T ss_dssp HHHHHHHHHHCTTCCEEEEECB-TTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCBCSS
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCccccCcCchhhhcCCHHHHHHHHHHHHHHHHHHHcCCCcEEEEECCchHHH
Confidence 4577778888999999999877 41 0111 22 2233333 26899999987776633
No 431
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.84 E-value=2.6e+02 Score=22.40 Aligned_cols=78 Identities=10% Similarity=0.082 Sum_probs=50.8
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
.+|-+|...-.....+...+.+.| +. +... .+..+.++++.+. ...+|++-++....++.++++.+++.
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~--~~-v~~~-------~~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~~ 72 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEG--YQ-TFQA-------ANGLQALDIVTKE-RPDLVLLDMKIPGMDGIEILKRMKVI 72 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTT--CE-EEEE-------SSHHHHHHHHHHH-CCSEEEEESCCTTCCHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCC--cE-EEEe-------CCHHHHHHHHhcc-CCCEEEEecCCCCCCHHHHHHHHHHh
Confidence 357778777777777767676544 33 2222 2345677777653 24677776664445788999999876
Q ss_pred CCCCCEEEE
Q 007327 248 KVNKPVVAW 256 (608)
Q Consensus 248 ~~~KPVvvl 256 (608)
....|||++
T Consensus 73 ~~~~~ii~~ 81 (124)
T 1srr_A 73 DENIRVIIM 81 (124)
T ss_dssp CTTCEEEEE
T ss_pred CCCCCEEEE
Confidence 567788887
No 432
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=25.81 E-value=1.2e+02 Score=29.68 Aligned_cols=53 Identities=19% Similarity=0.243 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHHHH-------------HHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSL-------------VEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~~f-------------~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++-.+ |- .|-.+| .+..++. ...||||+..-|..-.
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 108 (258)
T 4fzw_A 37 LVNELEAAATDTSISVCVITGN-ARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALG 108 (258)
T ss_dssp HHHHHHHHHTCTTCCEEEEECC-SSEEEECBCHHHHHTCCHHHHHTCSHHHHHHHHHTCCSCEEEEECSEEET
T ss_pred HHHHHHHHhhCCCeEEEEEeCC-CCceeCCCchhhhccchhhhHHHhHHHHHHHHHHHCCCCEEEEEcCccee
Confidence 4577788888999999988876 41 111111 1122222 3689999998776554
No 433
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=25.69 E-value=1.7e+02 Score=29.06 Aligned_cols=70 Identities=10% Similarity=0.012 Sum_probs=40.0
Q ss_pred cccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCCCEEEEecC----C--CCHHHHHHHHHHHHhCCCeEEc
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNNKVVIG 135 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~----G--f~e~~~~~l~~~a~~~g~rvlG 135 (608)
|+|.+..+..... ..++..+.+.....++++.+.+. .+.+.+++.+. | ++....++|.++|+++|+.++=
T Consensus 113 ~~~~~~~~~~~~~-g~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 113 PAYPPFFHLLSAT-QREGIFIDATGGINLHDVEKGFQ-AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp SCCTHHHHHHHHH-TCCEEEEECTTSCCHHHHHHHHH-TTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcHhHHHHHHHc-CCEEEEccCCCCCCHHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4455544443322 24555444432223455555555 46776666543 2 2444678899999999988763
No 434
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=25.58 E-value=47 Score=35.02 Aligned_cols=49 Identities=8% Similarity=-0.001 Sum_probs=34.8
Q ss_pred cccccCCHHHHhhcCCCccEEEEeccChhcHHHHHHHhcCCCC--CEEEEecCCC
Q 007327 62 AIPVHSTVEAACAAHPMADVFINFSSFRSAAASSMAALKQPTI--RVVAIIAEGV 114 (608)
Q Consensus 62 G~~~y~sv~~i~~~~p~vDlavi~vp~~~~~~~~le~~~~~gv--~~~viis~Gf 114 (608)
.+.+..++.++.. +.|++|++||..+ +..+++.+...-- ..+|..+=||
T Consensus 104 ~i~~t~dl~~al~---~ad~ii~avPs~~-~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 104 NLVANPDLIDSVK---DVDIIVFNIPHQF-LPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp SEEEESCHHHHHT---TCSEEEECSCGGG-HHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred CcEEeCCHHHHHh---cCCEEEEECChhh-hHHHHHHhccccCCCceeEEecccc
Confidence 4677888888776 4799999999986 8888888864221 2244445587
No 435
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=25.57 E-value=2.7e+02 Score=22.61 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=51.1
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
.+|-+|.-+-.....+...+.+.|. . +... -+..+.++++.+.+ ..+|++-+.....++-++++.+++.
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~~~~~~-~dlvl~D~~l~~~~g~~~~~~l~~~ 72 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERSGY--D-VITA-------SDGEEALKKAETEK-PDLIVLDVMLPKLDGIEVCKQLRQQ 72 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHHHC-CSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCc--E-EEEe-------cCHHHHHHHHhhcC-CCEEEEecCCCCCCHHHHHHHHHcC
Confidence 3577888887777777777766544 2 2222 23456677665532 3566666553345788999999986
Q ss_pred CCCCCEEEEE
Q 007327 248 KVNKPVVAWV 257 (608)
Q Consensus 248 ~~~KPVvvlk 257 (608)
....|||++-
T Consensus 73 ~~~~~ii~~s 82 (136)
T 1mvo_A 73 KLMFPILMLT 82 (136)
T ss_dssp TCCCCEEEEE
T ss_pred CCCCCEEEEE
Confidence 5678998874
No 436
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=25.47 E-value=1.2e+02 Score=31.04 Aligned_cols=34 Identities=18% Similarity=0.083 Sum_probs=24.4
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~ 112 (608)
++|+++.|+|.....+ ..+.+.++|+|.+||=.+
T Consensus 93 ~vDvV~eaTg~~~~~e-~a~~~l~aGak~VVIs~p 126 (337)
T 3e5r_O 93 GAEYVVESTGVFTDKE-KAAAHLKGGAKKVVISAP 126 (337)
T ss_dssp TCSEEEECSSSCCSHH-HHTHHHHTTCSEEEESSC
T ss_pred CCCEEEECCCchhhHH-HHHHHHHcCCCEEEEecC
Confidence 4899999999976544 445555589988776444
No 437
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=25.44 E-value=5.3e+02 Score=27.11 Aligned_cols=132 Identities=13% Similarity=0.074 Sum_probs=78.3
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCeEEcCCccc--ccccCcccccccCCcccccccc------------cCCCCCcEEE
Q 007327 107 VAIIAEGVPEADTKQLIAYARSNNKVVIGPATVG--GIQAGAFKIGDTAGTIDNIIHC------------KLYRPGSVGF 172 (608)
Q Consensus 107 ~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~G--i~~~~~~~l~~~~~~~~~~~p~------------~~~~~G~val 172 (608)
++.+-++..-.....+..++..+++..|.|.+-- +-+... .-+|....|. ..+.--.|++
T Consensus 129 v~aviG~~~S~~s~ava~i~~~~~iP~Is~~a~~~~lsd~~~------~p~~frt~psd~~~~~ai~~ll~~fgw~~V~l 202 (496)
T 3ks9_A 129 IAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTL------YKYFLRVVPSDTLQARAMLDIVKRYNWTYVSA 202 (496)
T ss_dssp EEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTT------CTTEEESSCCTHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEECCCccHHHHHHHHHHhhcceeEECCCcCCccccCccC------CCceEEecCChHHHHHHHHHHHHHcCCcEEEE
Confidence 4444455555556677788889999999876532 211110 0011111111 0123457999
Q ss_pred EecChhHHHHHHH----HHHhcCCceeEEeecC-CCCCCCCCHHHHHHHhhc-CCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 173 VSKSGGMSNELYN----TIARVTDGIYEGIAIG-GDVFPGSTLSDHILRFNN-IPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 173 vSQSG~l~~~~~~----~~~~~g~G~s~~vs~G-n~~~~dv~~~d~l~~l~~-Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
|......+...++ .+.+.|+-+.....+- +.. +.++...+.-+.+ .|++++|++|.+ ..+...|++.+++
T Consensus 203 i~~dd~~G~~~~~~~~~~~~~~Gi~v~~~~~i~~~~~--~~d~~~~l~~i~~~~~~a~vii~~~~--~~~~~~l~~~~~~ 278 (496)
T 3ks9_A 203 VHTEGNYGESGMDAFKELAAQEGLSIAHSDKIYSNAG--EKSFDRLLRKLRERLPKARVVVCFCE--GMTVRGLLSAMRR 278 (496)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCC--HHHHHHHHHHHHTTTTTTCEEEEECC--HHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHHHHHHcCceEEEEEEECCCCC--HHHHHHHHHHHHhccCceEEEEEecC--hHHHHHHHHHHHH
Confidence 9988877665544 4455677666543331 122 3456667777776 489999999976 3456778888887
Q ss_pred CC
Q 007327 247 GK 248 (608)
Q Consensus 247 a~ 248 (608)
..
T Consensus 279 ~g 280 (496)
T 3ks9_A 279 LG 280 (496)
T ss_dssp HT
T ss_pred hC
Confidence 65
No 438
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=25.24 E-value=2e+02 Score=28.53 Aligned_cols=112 Identities=14% Similarity=0.185 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC------hhHHHHHHHH
Q 007327 113 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS------GGMSNELYNT 186 (608)
Q Consensus 113 Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS------G~l~~~~~~~ 186 (608)
++++...+++.+.+++.|-+ ||... . .| . .-+.+.||++..+ ..+...+-+.
T Consensus 38 ~vs~~tr~rV~~~a~~lgY~---pn~~a-----~-~l-------~------~~~~~~Igvi~~~~~~~~~~~~~~gi~~~ 95 (355)
T 3e3m_A 38 PISSETRERILKVVKDMNYV---PDQVA-----G-SL-------T------TKRSGFVGLLLPSLNNLHFAQTAQSLTDV 95 (355)
T ss_dssp -------------------------------------------------------CEEEEEESCSBCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCC---cCHHH-----H-hh-------h------cCCCCEEEEEeCCCCchHHHHHHHHHHHH
Confidence 56677778888888887754 44211 0 11 0 0123456666432 2234445556
Q ss_pred HHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 187 IARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 187 ~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
+.+.|.-+..+ .+.++. -...++++.+.+ ..+..|++.. .......++.+++ .+.|||++
T Consensus 96 a~~~g~~~~~~-~~~~~~---~~~~~~~~~l~~-~~vdGiI~~~---~~~~~~~~~~l~~--~~iPvV~i 155 (355)
T 3e3m_A 96 LEQGGLQLLLG-YTAYSP---EREEQLVETMLR-RRPEAMVLSY---DGHTEQTIRLLQR--ASIPIVEI 155 (355)
T ss_dssp HHHTTCEEEEE-ECTTCH---HHHHHHHHHHHH-TCCSEEEEEC---SCCCHHHHHHHHH--CCSCEEEE
T ss_pred HHHCCCEEEEE-eCCCCh---HHHHHHHHHHHh-CCCCEEEEeC---CCCCHHHHHHHHh--CCCCEEEE
Confidence 66666555333 222222 234567776665 4677877763 3333355555554 58999988
No 439
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=25.19 E-value=1.1e+02 Score=29.67 Aligned_cols=53 Identities=21% Similarity=0.255 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC---------------ccHH----HHHHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG---------------RDEY----SLVEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~---------------~~~~----~f~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++-.+ |- .+.. .+.+..++. ...||||+..-|..-.
T Consensus 32 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 104 (254)
T 3hrx_A 32 LYAALKEGEEDREVRALLLTGA-GRAFSAGQDLTEFGDRKPDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAG 104 (254)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSBCCBCGGGTTTSCCCHHHHTHHHHHHHHHHHTCSSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCeEEEEEeCC-CCCcccCccHHHhcccchhhHHHHHHHHHHHHHHHhCCCCEEEEECCEeee
Confidence 4567788888888998888776 31 1122 222233333 3789999998776554
No 440
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=25.09 E-value=1.7e+02 Score=26.02 Aligned_cols=79 Identities=10% Similarity=0.078 Sum_probs=54.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|--.-.+...+...+.+.|+- +... -+..+.++.+.+. ...+|++-+.....+|-++++.+|+
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~~---v~~~-------~~~~~al~~~~~~-~~dlvl~D~~lp~~~g~~~~~~l~~ 75 (184)
T 3rqi_A 7 DKNFLVIDDNEVFAGTLARGLERRGYA---VRQA-------HNKDEALKLAGAE-KFEFITVXLHLGNDSGLSLIAPLCD 75 (184)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCE---EEEE-------CSHHHHHHHHTTS-CCSEEEECSEETTEESHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCCE---EEEe-------CCHHHHHHHHhhC-CCCEEEEeccCCCccHHHHHHHHHh
Confidence 446888888888888887777775542 2222 2345778877654 3567776655445678999999988
Q ss_pred CCCCCCEEEE
Q 007327 247 GKVNKPVVAW 256 (608)
Q Consensus 247 a~~~KPVvvl 256 (608)
.....|||++
T Consensus 76 ~~~~~~ii~l 85 (184)
T 3rqi_A 76 LQPDARILVL 85 (184)
T ss_dssp HCTTCEEEEE
T ss_pred cCCCCCEEEE
Confidence 6667788887
No 441
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.97 E-value=1.2e+02 Score=32.80 Aligned_cols=46 Identities=7% Similarity=0.031 Sum_probs=26.5
Q ss_pred CccEEEEeccChhc-----------HHHHHHHhcC-CCCCEEEEecCCCCHHHHHHHH
Q 007327 78 MADVFINFSSFRSA-----------AASSMAALKQ-PTIRVVAIIAEGVPEADTKQLI 123 (608)
Q Consensus 78 ~vDlavi~vp~~~~-----------~~~~le~~~~-~gv~~~viis~Gf~e~~~~~l~ 123 (608)
+.|+++++||.... +..+.+.+.+ ..-..+||..|.++....+++.
T Consensus 101 ~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~ 158 (478)
T 3g79_A 101 ELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMA 158 (478)
T ss_dssp GCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred cCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence 37999999997631 2333333332 1223477777877765444444
No 442
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=24.86 E-value=1.2e+02 Score=30.32 Aligned_cols=72 Identities=17% Similarity=0.209 Sum_probs=41.9
Q ss_pred cccCCHHHHhhcCCCccEEEEeccCh-------hcHHHHHHHhcCCCCCEEEEecC----C--CCHHHHHHHHHHHHhCC
Q 007327 64 PVHSTVEAACAAHPMADVFINFSSFR-------SAAASSMAALKQPTIRVVAIIAE----G--VPEADTKQLIAYARSNN 130 (608)
Q Consensus 64 ~~y~sv~~i~~~~p~vDlavi~vp~~-------~~~~~~le~~~~~gv~~~viis~----G--f~e~~~~~l~~~a~~~g 130 (608)
|+|.+..+..... ..+. +.+|.. -.++++.+.+.+.+++.+++.+. | ++....++|.++|+++|
T Consensus 117 ~~~~~~~~~~~~~-g~~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 193 (391)
T 3dzz_A 117 PVYNMFYSVIEGN-GRRV--ISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQ 193 (391)
T ss_dssp SCCHHHHHHHHHT-TCEE--EECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHc-CCEE--EEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 4566555544432 1333 344431 23555655665457777665442 3 33456889999999999
Q ss_pred CeEEcCCc
Q 007327 131 KVVIGPAT 138 (608)
Q Consensus 131 ~rvlGPNc 138 (608)
+.++==++
T Consensus 194 ~~li~De~ 201 (391)
T 3dzz_A 194 VLLISDEI 201 (391)
T ss_dssp CEEEEECT
T ss_pred CEEEEecc
Confidence 98764333
No 443
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=24.79 E-value=2.9e+02 Score=22.67 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=79.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcC---------CCccEEEEEEecCCcc
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNI---------PQVKMMVVLGELGGRD 236 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~D---------p~T~~I~ly~E~g~~~ 236 (608)
...+|-+|..+-.....+...+.+.|.... +.. -.+..+.++++.+. ....+|++-++....+
T Consensus 5 ~~~~iLivdd~~~~~~~l~~~L~~~g~~~~-v~~-------~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~ 76 (149)
T 1k66_A 5 ATQPLLVVEDSDEDFSTFQRLLQREGVVNP-IYR-------CITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTD 76 (149)
T ss_dssp TTSCEEEECCCHHHHHHHHHHHHHTTBCSC-EEE-------ECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSC
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCce-EEE-------ECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCC
Confidence 345799999999888888888877654211 111 23456788888752 3456777766644457
Q ss_pred HHHHHHHHHhCC--CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHH
Q 007327 237 EYSLVEALKQGK--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAI 310 (608)
Q Consensus 237 ~~~f~~~~r~a~--~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~ 310 (608)
+.++++.+|+.. ...|||++-...+. .....+ .++|+. ..-+.++|...+
T Consensus 77 g~~~~~~l~~~~~~~~~~ii~~t~~~~~-----------------------~~~~~~-~~~g~~~~l~kP~~~~~l~~~i 132 (149)
T 1k66_A 77 GREVLQEIKQDEVLKKIPVVIMTTSSNP-----------------------KDIEIC-YSYSISSYIVKPLEIDRLTETV 132 (149)
T ss_dssp HHHHHHHHTTSTTGGGSCEEEEESCCCH-----------------------HHHHHH-HHTTCSEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHhCcccCCCeEEEEeCCCCH-----------------------HHHHHH-HHCCCCEEEeCCCCHHHHHHHH
Confidence 889999998854 56799888321111 222233 356653 245889999999
Q ss_pred HHHHHHHHhc
Q 007327 311 KETFEKLVEE 320 (608)
Q Consensus 311 ~~~~~~~~~~ 320 (608)
+.+...+...
T Consensus 133 ~~~~~~~~~~ 142 (149)
T 1k66_A 133 QTFIKYWLDI 142 (149)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHhhhh
Confidence 8888766544
No 444
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=24.67 E-value=1.6e+02 Score=27.59 Aligned_cols=171 Identities=8% Similarity=0.002 Sum_probs=84.9
Q ss_pred ccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc--cc-
Q 007327 65 VHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT--VG- 140 (608)
Q Consensus 65 ~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc--~G- 140 (608)
.+..+.+...+. ..++.+....... .....++.+.+.++.++|+...... . .+..+.+++.|+.++-=|+ -+
T Consensus 20 ~~~gi~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~--~~~~~~~~~~~iPvV~~~~~~~~~ 95 (272)
T 3o74_A 20 IAKQLEQGARAR-GYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPP-E--DDSYRELQDKGLPVIAIDRRLDPA 95 (272)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCS-S--CCHHHHHHHTTCCEEEESSCCCTT
T ss_pred HHHHHHHHHHHC-CCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccc-c--HHHHHHHHHcCCCEEEEccCCCcc
Confidence 334445544444 3777766554321 1235667777789999888654311 1 2344566778887652221 10
Q ss_pred ---ccccCcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeEEeecCCCCCCCCCHH
Q 007327 141 ---GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYEGIAIGGDVFPGSTLS 211 (608)
Q Consensus 141 ---i~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~ 211 (608)
.+..+....+ -.....+ .....++|++++..... ...+.+.+++.|+-...+....... +-...
T Consensus 96 ~~~~V~~d~~~~~---~~a~~~L--~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~--~~~~~ 168 (272)
T 3o74_A 96 HFCSVISDDRDAS---RQLAASL--LSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQGEAFSR--ECGQR 168 (272)
T ss_dssp TCEEEEECHHHHH---HHHHHHH--HTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEEESSSSH--HHHHH
T ss_pred ccCEEEEchHHHH---HHHHHHH--HHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheeecCCCCH--HHHHH
Confidence 0111110000 0000000 01245689999754322 1223445566676655444333333 33344
Q ss_pred HHHHHhhcCC-CccEEEEEEecCCccHHHHHHHHHhCCC
Q 007327 212 DHILRFNNIP-QVKMMVVLGELGGRDEYSLVEALKQGKV 249 (608)
Q Consensus 212 d~l~~l~~Dp-~T~~I~ly~E~g~~~~~~f~~~~r~a~~ 249 (608)
.+.++|...| +..+|... +-.....+++++++...
T Consensus 169 ~~~~~l~~~~~~~~ai~~~---~d~~a~g~~~al~~~g~ 204 (272)
T 3o74_A 169 LMQQLIDDLGGLPDALVTT---SYVLLQGVFDTLQARPV 204 (272)
T ss_dssp HHHHHHHHHTSCCSEEEES---SHHHHHHHHHHHHTSCG
T ss_pred HHHHHHhcCCCCCcEEEEe---CchHHHHHHHHHHHcCC
Confidence 5666777777 67777554 22234567888887653
No 445
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=24.64 E-value=92 Score=31.01 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------ccH---HH----HHHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--------------RDE---YS----LVEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--------------~~~---~~----f~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++-.+ |- .+. .. +.+..++. ...||||+..-|..-.
T Consensus 65 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 139 (287)
T 2vx2_A 65 LQSDILHDADSNDLKVIIISAE-GPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATA 139 (287)
T ss_dssp HHHHHHTTTTCTTCCEEEEEES-SSEEECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHTCSSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCeEEEEEECC-CCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEc
Confidence 4567777888999999999887 41 011 11 22233333 3789999998776554
No 446
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=24.60 E-value=56 Score=31.96 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=12.4
Q ss_pred CCCCEEEEEeCCCccC
Q 007327 249 VNKPVVAWVSGTCARL 264 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g 264 (608)
..||||+..-|..-.|
T Consensus 95 ~~kPvIAav~G~a~Gg 110 (261)
T 1ef8_A 95 FPKPIISMVEGSVWGG 110 (261)
T ss_dssp CSSCEEEEECSEEETH
T ss_pred CCCCEEEEECCEEEeH
Confidence 6899999987766543
No 447
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=24.58 E-value=1.7e+02 Score=28.90 Aligned_cols=112 Identities=12% Similarity=0.050 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC------hhHHHHHHHH
Q 007327 113 GVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS------GGMSNELYNT 186 (608)
Q Consensus 113 Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS------G~l~~~~~~~ 186 (608)
+++|...+++.+.+++.|-+ ||... . .+ ..-+...|+++..+ ..+...+-+.
T Consensus 30 ~vs~~tr~rV~~~~~~lgY~---pn~~a-----~-~l-------------~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~ 87 (339)
T 3h5o_A 30 QVSEQLREKVMQAVDALAYV---PSRSA-----S-TL-------------ASAKSRTVLVLIPSLANTVFLETLTGIETV 87 (339)
T ss_dssp -------------------------------------------------------CEEEEEESCSTTCTTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCC---cCHHH-----H-hh-------------hcCCCCEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 56666777888888876643 43211 0 01 00123345555322 2344555566
Q ss_pred HHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 187 IARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 187 ~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
+.+.|.-+. +...+.. .-...++++.+.+ ..+..|++.- ......+.+.+++ .+.|||++
T Consensus 88 a~~~g~~~~--~~~~~~~--~~~~~~~~~~l~~-~~vdGiIi~~---~~~~~~~~~~l~~--~~iPvV~~ 147 (339)
T 3h5o_A 88 LDAAGYQML--IGNSHYD--AGQELQLLRAYLQ-HRPDGVLITG---LSHAEPFERILSQ--HALPVVYM 147 (339)
T ss_dssp HHHTTCEEE--EEECTTC--HHHHHHHHHHHHT-TCCSEEEEEC---SCCCTTHHHHHHH--TTCCEEEE
T ss_pred HHHCCCEEE--EEeCCCC--hHHHHHHHHHHHc-CCCCEEEEeC---CCCCHHHHHHHhc--CCCCEEEE
Confidence 666665543 3332222 2234566666654 4778887763 3333345555554 57999988
No 448
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=24.54 E-value=64 Score=28.26 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=32.6
Q ss_pred EEeccChhcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCC
Q 007327 83 INFSSFRSAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPA 137 (608)
Q Consensus 83 vi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPN 137 (608)
++.+|... .+..+.++.-.++ .++|+|.|+.. .+++++.|+++|+.|+--+
T Consensus 55 l~I~~G~r-~~~~l~a~~~~~~-~~iIlt~g~~~--~~~i~~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 55 ALVTGGDR-SDLLLTALEMPNV-RCLILTGNLEP--VQLVLTKAEERGVPVILTG 105 (139)
T ss_dssp EEEEETTC-HHHHHHHTTCTTE-EEEEEETTCCC--CHHHHHHHHHHTCCEEECS
T ss_pred EEEEcCCH-HHHHHHHHhCCCC-cEEEEcCCCCC--CHHHHHHHHHCCCeEEEEC
Confidence 33365654 3444444431566 46667999864 4567789999999987554
No 449
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=24.44 E-value=3.7e+02 Score=24.37 Aligned_cols=80 Identities=14% Similarity=0.017 Sum_probs=55.6
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|...-.+...+...+.+.|+ . ++.. .+..+.++.+.+. ...+|++-+.....++-++++.+++.
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~--~-v~~~-------~~~~~a~~~~~~~-~~dlvllD~~l~~~~g~~~~~~l~~~ 76 (233)
T 1ys7_A 8 PRVLVVDDDSDVLASLERGLRLSGF--E-VATA-------VDGAEALRSATEN-RPDAIVLDINMPVLDGVSVVTALRAM 76 (233)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC--E-EEEE-------SSHHHHHHHHHHS-CCSEEEEESSCSSSCHHHHHHHHHHT
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCC--E-EEEE-------CCHHHHHHHHHhC-CCCEEEEeCCCCCCCHHHHHHHHHhc
Confidence 3688999988888888777776543 2 2222 2345777777654 35677777663345788999999986
Q ss_pred CCCCCEEEEEe
Q 007327 248 KVNKPVVAWVS 258 (608)
Q Consensus 248 ~~~KPVvvlk~ 258 (608)
....|||++-.
T Consensus 77 ~~~~~ii~lt~ 87 (233)
T 1ys7_A 77 DNDVPVCVLSA 87 (233)
T ss_dssp TCCCCEEEEEC
T ss_pred CCCCCEEEEEc
Confidence 66789988853
No 450
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=24.43 E-value=63 Score=31.69 Aligned_cols=54 Identities=19% Similarity=0.201 Sum_probs=33.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--ccH-----------HHH----HH-HHHhC----CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--RDE-----------YSL----VE-ALKQG----KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~~~-----------~~f----~~-~~r~a----~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++..+ |- ..| ..| .+ ..++. ...||||+..-|..-.|
T Consensus 41 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~Gg 116 (265)
T 3rsi_A 41 FAAAWDEIDHDDGIRAAILTGA-GSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGG 116 (265)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTCSEECC--------------CCCHHHHHHHTTSSCCCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCCcccCcCCCcccccchHHHHHHhHHHHHHHHHHhcCCCCCEEEEECCeeeHH
Confidence 3466777778888888888776 41 000 011 12 33333 57899999998876653
No 451
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=24.34 E-value=69 Score=31.55 Aligned_cols=54 Identities=15% Similarity=0.297 Sum_probs=35.3
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--------------ccHH---HHH----HHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--------------RDEY---SLV----EALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--------------~~~~---~f~----~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- .++. ++. +..++. ...||||+..-|..-.|
T Consensus 56 L~~al~~~~~d~~vr~vVltg~-g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GG 131 (263)
T 2j5g_A 56 FPDAFYDISRDRDNRVVILTGS-GDAWMAEIDFPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLH 131 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEECB-TTEEECEECSGGGCCTTSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEECSC
T ss_pred HHHHHHHHHhCCCcEEEEEECC-CCCcccCcCHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcchHH
Confidence 4577788888999999999876 40 1221 222 233333 37899999998876633
No 452
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=24.28 E-value=1.4e+02 Score=24.35 Aligned_cols=76 Identities=12% Similarity=-0.035 Sum_probs=49.9
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|...-.....+...+.+. ++. +.. --+..+.++.+.+. ..+|++-+.....++-++++.+|+..
T Consensus 5 ~ilivdd~~~~~~~l~~~L~~~--~~~-v~~-------~~~~~~~~~~~~~~--~dlvi~D~~l~~~~g~~~~~~l~~~~ 72 (135)
T 3eqz_A 5 RVFIVDDDTLTCNLLKTIVEPI--FGN-VEA-------FQHPRAFLTLSLNK--QDIIILDLMMPDMDGIEVIRHLAEHK 72 (135)
T ss_dssp EEEEECSCHHHHHHHHHHHTTT--CSC-EEE-------ESCHHHHTTSCCCT--TEEEEEECCTTTTHHHHHHHHHHHTT
T ss_pred eEEEEeCCHHHHHHHHHHHHhh--cce-eee-------ecCHHHHHHhhccC--CCEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 5777887777777777777655 222 111 12334566666555 56777766644567889999999866
Q ss_pred CCCCEEEE
Q 007327 249 VNKPVVAW 256 (608)
Q Consensus 249 ~~KPVvvl 256 (608)
...|||++
T Consensus 73 ~~~~ii~~ 80 (135)
T 3eqz_A 73 SPASLILI 80 (135)
T ss_dssp CCCEEEEE
T ss_pred CCCCEEEE
Confidence 67788877
No 453
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=24.18 E-value=83 Score=31.08 Aligned_cols=54 Identities=20% Similarity=0.362 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc-------------------c-HHHH----HHHHHhCC-CCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR-------------------D-EYSL----VEALKQGK-VNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~-------------------~-~~~f----~~~~r~a~-~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |-. + ...+ .+..++.. ..||||+..-|..-.|
T Consensus 47 L~~al~~~~~d~~vr~vVltg~-G~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~Gg 125 (274)
T 4fzw_C 47 LAECLKQVERDDTIRCLLLTGA-GRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGA 125 (274)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-SSCSBCCBCCC---------CCCHHHHHHHTHHHHHHHHHHCSSCEEEEECSCEETH
T ss_pred HHHHHHHHHhCCCceEEEEECC-CCceeCCcChHhhhccccccchHHHHHHHHHHHHHHHHHHHCCCCEEEEECCceeec
Confidence 4567788889999999998876 410 0 1111 12233332 7899999988776543
No 454
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=24.04 E-value=3.5e+02 Score=26.30 Aligned_cols=111 Identities=7% Similarity=0.017 Sum_probs=58.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC---hh----HHHHHHHHH
Q 007327 115 PEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS---GG----MSNELYNTI 187 (608)
Q Consensus 115 ~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS---G~----l~~~~~~~~ 187 (608)
+|...+++.+.|++.|=+ ||...- ..-+...|+++..+ .. +...+-+.+
T Consensus 15 s~~tr~rV~~aa~elgY~---pn~~Ar---------------------~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a 70 (342)
T 1jx6_A 15 FPEQRNLTNALSEAVRAQ---PVPLSK---------------------PTQRPIKISVVYPGQQVSDYWVRNIASFEKRL 70 (342)
T ss_dssp CHHHHHHHHHHHHHHHSC---CCCCSS---------------------CCSSCEEEEEEECCCSSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCC---CCcccc---------------------ccCCceEEEEEecCCcccHHHHHHHHHHHHHH
Confidence 455678899999996654 443211 00134457776543 22 333444556
Q ss_pred HhcCCceeEEe-ecCCCCCCCC-CHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 188 ARVTDGIYEGI-AIGGDVFPGS-TLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 188 ~~~g~G~s~~v-s~Gn~~~~dv-~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
.+.|..+..++ .+.++. |. ...+.++.+.+ ..+.+|++... .......++.+++ .++|+|++
T Consensus 71 ~~~g~~~~~~~~~~~~~~--~~~~~~~~i~~l~~-~~vdgiIi~~~--~~~~~~~~~~~~~--~~ip~V~~ 134 (342)
T 1jx6_A 71 YKLNINYQLNQVFTRPNA--DIKQQSLSLMEALK-SKSDYLIFTLD--TTRHRKFVEHVLD--STNTKLIL 134 (342)
T ss_dssp HHTTCCEEEEEEECCTTC--CHHHHHHHHHHHHH-TTCSEEEECCS--SSTTHHHHHHHHH--HCSCEEEE
T ss_pred HHcCCeEEEEecCCCCcc--CHHHHHHHHHHHHh-cCCCEEEEeCC--hHhHHHHHHHHHH--cCCCEEEE
Confidence 66676655443 333111 21 23466776665 35788887322 2222344444443 47898877
No 455
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.03 E-value=2.5e+02 Score=27.41 Aligned_cols=47 Identities=11% Similarity=0.256 Sum_probs=29.7
Q ss_pred ccCCHHHHhhcCCCccEEEEeccChh-----------------cHHHHHHHhcCCCCCEEEEecC
Q 007327 65 VHSTVEAACAAHPMADVFINFSSFRS-----------------AAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 65 ~y~sv~~i~~~~p~vDlavi~vp~~~-----------------~~~~~le~~~~~gv~~~viis~ 112 (608)
-..++.++.... ++|.+|-+..... ....+++.|.+.+++.+|.+|+
T Consensus 66 d~~~~~~~~~~~-~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 66 DERALARIFDAH-PITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp CHHHHHHHHHHS-CCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHhcc-CCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 344555555433 4898876553210 1235778888889998888876
No 456
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=24.03 E-value=3.4e+02 Score=27.10 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=40.1
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHH
Q 007327 209 TLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAK 288 (608)
Q Consensus 209 ~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~ 288 (608)
++.|++ +|++..+|.+..- .-...+-...+++ .+|+|++=||-.... ..++..
T Consensus 57 ~~~~~l----~~~~~D~V~i~tp-~~~h~~~~~~al~---~gk~vl~EKP~~~~~-------------------~~~~~l 109 (354)
T 3db2_A 57 TMEALL----AREDVEMVIITVP-NDKHAEVIEQCAR---SGKHIYVEKPISVSL-------------------DHAQRI 109 (354)
T ss_dssp SHHHHH----HCSSCCEEEECSC-TTSHHHHHHHHHH---TTCEEEEESSSCSSH-------------------HHHHHH
T ss_pred CHHHHh----cCCCCCEEEEeCC-hHHHHHHHHHHHH---cCCEEEEccCCCCCH-------------------HHHHHH
Confidence 455555 4788888887765 3333333333333 689999998633321 112455
Q ss_pred HHHHHHcCCcccCCHH
Q 007327 289 NQALRDAGAVVPTSYE 304 (608)
Q Consensus 289 ~a~~~qaGvi~v~~~~ 304 (608)
.++.++.|+...-...
T Consensus 110 ~~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 110 DQVIKETGVKFLCGHS 125 (354)
T ss_dssp HHHHHHHCCCEEEECG
T ss_pred HHHHHHcCCeEEEeec
Confidence 5677888886544433
No 457
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=24.02 E-value=4.7e+02 Score=27.90 Aligned_cols=139 Identities=13% Similarity=0.063 Sum_probs=77.9
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcc--cccccCcccccccCCcccccccc------------cCCCCCcEEE
Q 007327 107 VAIIAEGVPEADTKQLIAYARSNNKVVIGPATV--GGIQAGAFKIGDTAGTIDNIIHC------------KLYRPGSVGF 172 (608)
Q Consensus 107 ~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~--Gi~~~~~~~l~~~~~~~~~~~p~------------~~~~~G~val 172 (608)
++.+-++..-.....+..++...++..|.+.+. .+-+... .-.|....|. ..+.--.|++
T Consensus 118 v~aviG~~~S~~s~~va~~~~~~~iP~Is~~a~~~~lsd~~~------~p~~fr~~p~d~~~~~a~~~ll~~fgw~~V~i 191 (555)
T 2e4u_A 118 IAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSR------YDYFARTVPPDFYQAKAMAEILRFFNWTYVST 191 (555)
T ss_dssp EEEEEECSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTT------CTTEEESSCCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCcCCceEeCCcCCCccCCccc------CCCceeeCCChHHHHHHHHHHHHHcCCeEEEE
Confidence 333334444445566778888899999877543 2211111 0011111111 0123347999
Q ss_pred EecChhHHHHHH----HHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 173 VSKSGGMSNELY----NTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 173 vSQSG~l~~~~~----~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
|......+...+ ..+.+.|+-+.....+-... .+.++...+.-+.....+++|++|.. ..+...|++.+++..
T Consensus 192 i~~d~~~g~~~~~~~~~~~~~~gi~v~~~~~~~~~~-~~~~~~~~l~~i~~~s~a~vIi~~~~--~~~~~~~~~~~~~~g 268 (555)
T 2e4u_A 192 VASEGDYGETGIEAFEQEARLRNICIATAEKVGRSN-IRKSYDSVIRELLQKPNARVVVLFMR--SDDSRELIAAANRVN 268 (555)
T ss_dssp EEESSTTHHHHHHHHHHHHHTTTCEEEEEEEECTTC-CHHHHHHHHHHHHTCTTCCEEEEECC--HHHHHHHHHHHHHTT
T ss_pred EEeeChHHHHHHHHHHHHHHHCCccEEEEEEeCCCC-ChHHHHHHHHHHhccCCCCEEEEEcC--HHHHHHHHHHHHHhc
Confidence 988776665543 44555677665544443211 02345566777766678899999976 345677888888754
Q ss_pred CCCCEE
Q 007327 249 VNKPVV 254 (608)
Q Consensus 249 ~~KPVv 254 (608)
.+|+.|
T Consensus 269 ~~~~~i 274 (555)
T 2e4u_A 269 ASFTWV 274 (555)
T ss_dssp CCCEEE
T ss_pred CCeEEE
Confidence 544443
No 458
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=23.82 E-value=2.9e+02 Score=22.29 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=70.7
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHh
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQ 246 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~ 246 (608)
+-+|-+|.........+...+.+.|.-+. .. -+..+.++.+.+.+ ..+|++-......++.++++.+|+
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~---~~-------~~~~~a~~~l~~~~-~dlii~d~~l~~~~g~~~~~~l~~ 74 (132)
T 3lte_A 6 SKRILVVDDDQAMAAAIERVLKRDHWQVE---IA-------HNGFDAGIKLSTFE-PAIMTLDLSMPKLDGLDVIRSLRQ 74 (132)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEE---EE-------SSHHHHHHHHHHTC-CSEEEEESCBTTBCHHHHHHHHHT
T ss_pred CccEEEEECCHHHHHHHHHHHHHCCcEEE---Ee-------CCHHHHHHHHHhcC-CCEEEEecCCCCCCHHHHHHHHHh
Confidence 44789999999888888888877554322 22 23457777776543 467777666445678999999998
Q ss_pred CC-CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHH
Q 007327 247 GK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFE 315 (608)
Q Consensus 247 a~-~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~ 315 (608)
.. ...|+|++-++... .....+ .++|+. ..-+.++|...++....
T Consensus 75 ~~~~~~~~ii~~~~~~~-----------------------~~~~~~-~~~g~~~~l~kP~~~~~l~~~i~~~~~ 124 (132)
T 3lte_A 75 NKVANQPKILVVSGLDK-----------------------AKLQQA-VTEGADDYLEKPFDNDALLDRIHDLVN 124 (132)
T ss_dssp TTCSSCCEEEEECCSCS-----------------------HHHHHH-HHHTCCEEECSSCCHHHHHHHHHHHHC
T ss_pred cCccCCCeEEEEeCCCh-----------------------HHHHHH-HHhChHHHhhCCCCHHHHHHHHHHHcC
Confidence 65 24566666433221 222233 345652 34578888887776554
No 459
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.79 E-value=3.3e+02 Score=22.97 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=77.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 166 RPGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 166 ~~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
++.+|-+|...-.....+...+.+.|+-+ ... .+..+.++.+.+. ...+|++-++....++-++++.+|
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~al~~l~~~-~~dlii~D~~l~~~~g~~~~~~lr 74 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEHLKHILEETGYQT---EHV-------RNGREAVRFLSLT-RPDLIISDVLMPEMDGYALCRWLK 74 (154)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHTTTCEE---EEE-------SSHHHHHHHHTTC-CCSEEEEESCCSSSCHHHHHHHHH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHCCCEE---EEe-------CCHHHHHHHHHhC-CCCEEEEeCCCCCCCHHHHHHHHH
Confidence 45679999999988888888887665432 221 2456788887654 367787777755568999999999
Q ss_pred hCC--CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHHH
Q 007327 246 QGK--VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFEK 316 (608)
Q Consensus 246 ~a~--~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~~ 316 (608)
+.. ...|||++-.-.+. .....+ .++|+ ...-+.++|...++.++..
T Consensus 75 ~~~~~~~~pii~~s~~~~~-----------------------~~~~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 75 GQPDLRTIPVILLTILSDP-----------------------RDVVRS-LECGADDFITKPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp HSTTTTTSCEEEEECCCSH-----------------------HHHHHH-HHHCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred hCCCcCCCCEEEEECCCCh-----------------------HHHHHH-HHCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 864 56798887321111 222233 35665 3345888999888877764
No 460
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=23.75 E-value=1.7e+02 Score=31.10 Aligned_cols=75 Identities=15% Similarity=0.294 Sum_probs=41.7
Q ss_pred ccccCCHHHHhhcCCCccEEEEeccCh----hcHHHHHHHhcC---C--CCCEEEEecC----C--CCHHHHHHHHHHHH
Q 007327 63 IPVHSTVEAACAAHPMADVFINFSSFR----SAAASSMAALKQ---P--TIRVVAIIAE----G--VPEADTKQLIAYAR 127 (608)
Q Consensus 63 ~~~y~sv~~i~~~~p~vDlavi~vp~~----~~~~~~le~~~~---~--gv~~~viis~----G--f~e~~~~~l~~~a~ 127 (608)
-|+|++..++....+ ..+.-+.+... -.++++.+.+.+ . ++|.+++++. | ++....++|.++|+
T Consensus 189 ~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 189 IPQYPLYSASIALHG-GALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp ESCCTHHHHHHHHTT-CEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CCCcHhHHHHHHHcC-CEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 367777666554332 44443333221 123444444432 2 5666666543 3 45557889999999
Q ss_pred hCCCeEEcCCc
Q 007327 128 SNNKVVIGPAT 138 (608)
Q Consensus 128 ~~g~rvlGPNc 138 (608)
++|+.++==+.
T Consensus 268 ~~~~~li~Dea 278 (500)
T 3tcm_A 268 NEGLVLLADEV 278 (500)
T ss_dssp HHTCEEEEECT
T ss_pred HcCCEEEEecC
Confidence 99988764333
No 461
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.60 E-value=2e+02 Score=23.88 Aligned_cols=113 Identities=11% Similarity=0.095 Sum_probs=68.1
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.-.-.....+...+... |+. +.... +..+.++++.+. ...+|++-+.....++.++++.+|+..
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~--g~~-v~~~~-------~~~~a~~~l~~~-~~dlvllD~~l~~~~g~~l~~~l~~~~ 74 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDE--PYD-IFHVE-------TGRDAIQFIERS-KPQLIILDLKLPDMSGEDVLDWINQND 74 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTS--SSE-EEEES-------SHHHHHHHHHHH-CCSEEEECSBCSSSBHHHHHHHHHHTT
T ss_pred eEEEEeCCHHHHHHHHHHHHhc--Cce-EEEeC-------CHHHHHHHHHhc-CCCEEEEecCCCCCCHHHHHHHHHhcC
Confidence 6778888877777776666544 443 22222 345677776653 235666655533457889999998865
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCc----ccCCHHHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAV----VPTSYEAFESAIKETFEK 316 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi----~v~~~~el~~~~~~~~~~ 316 (608)
...|||++-..... .....+ -++|+. ..-+.++|...++.+...
T Consensus 75 ~~~~ii~ls~~~~~-----------------------~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 75 IPTSVIIATAHGSV-----------------------DLAVNL-IQKGAEDFLEKPINADRLKTSVALHLKR 122 (137)
T ss_dssp CCCEEEEEESSCCH-----------------------HHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCcH-----------------------HHHHHH-HHCCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 67788877321111 222223 356653 346788988888776643
No 462
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.56 E-value=2.4e+02 Score=26.71 Aligned_cols=88 Identities=11% Similarity=0.053 Sum_probs=56.9
Q ss_pred CCCcEEEEecC-h-hHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHH
Q 007327 166 RPGSVGFVSKS-G-GMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEA 243 (608)
Q Consensus 166 ~~G~valvSQS-G-~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~ 243 (608)
-.|++.+|+-. | ++|.++...+.++|.- ++-++... -...+..+.+.+.+..++..+.+. +.|.+...++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~---V~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D--l~~~~~v~~~ 91 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGAD---VVISDYHE---RRLGETRDQLADLGLGRVEAVVCD--VTSTEAVDAL 91 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCE---EEEEESCH---HHHHHHHHHHHTTCSSCEEEEECC--TTCHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCE---EEEecCCH---HHHHHHHHHHHhcCCCceEEEEeC--CCCHHHHHHH
Confidence 46889999987 7 7999999999888743 44444332 234566677766666677666666 7777665555
Q ss_pred HHhCC---CCCCEEEEEeCCC
Q 007327 244 LKQGK---VNKPVVAWVSGTC 261 (608)
Q Consensus 244 ~r~a~---~~KPVvvlk~Grs 261 (608)
+++.. .+.=+++.-+|..
T Consensus 92 ~~~~~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 92 ITQTVEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHhCCCcEEEECCCcC
Confidence 54432 2345666655543
No 463
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=23.50 E-value=81 Score=31.71 Aligned_cols=117 Identities=11% Similarity=0.027 Sum_probs=71.3
Q ss_pred CcEEEEecChhHHHHHHHHHHh-cCCceeEEeecCCCCC-------------CCC----CHHHHHHHhhcCCCccEEEEE
Q 007327 168 GSVGFVSKSGGMSNELYNTIAR-VTDGIYEGIAIGGDVF-------------PGS----TLSDHILRFNNIPQVKMMVVL 229 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~-~g~G~s~~vs~Gn~~~-------------~dv----~~~d~l~~l~~Dp~T~~I~ly 229 (608)
=+|+++.-+|.+|..++..+.+ .++-+..++..-+... .++ ++.+++ ++++ ++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll----~~aD--Vv--- 92 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAF----SNTE--GI--- 92 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHT----TSCS--EE---
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHh----cCCC--EE---
Confidence 3799999999999999987654 4666666665432100 012 344433 3444 43
Q ss_pred EecCCccHHHHHHHHHhCC-CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCCcccCCHHHHHH
Q 007327 230 GELGGRDEYSLVEALKQGK-VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGAVVPTSYEAFES 308 (608)
Q Consensus 230 ~E~g~~~~~~f~~~~r~a~-~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGvi~v~~~~el~~ 308 (608)
++ +..+....+.++.+. .+||||+--.|-++. .-+..++++++.+++...++.==..
T Consensus 93 ID--FT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e--------------------~~~~L~~aa~~~~~~~a~N~SiGv~ 150 (288)
T 3ijp_A 93 LD--FSQPQASVLYANYAAQKSLIHIIGTTGFSKT--------------------EEAQIADFAKYTTIVKSGNMSLGVN 150 (288)
T ss_dssp EE--CSCHHHHHHHHHHHHHHTCEEEECCCCCCHH--------------------HHHHHHHHHTTSEEEECSCCCHHHH
T ss_pred EE--cCCHHHHHHHHHHHHHcCCCEEEECCCCCHH--------------------HHHHHHHHhCcCCEEEECCCcHHHH
Confidence 33 456666666555543 789999765553321 1145667788899999988765555
Q ss_pred HHHHHHH
Q 007327 309 AIKETFE 315 (608)
Q Consensus 309 ~~~~~~~ 315 (608)
+...+..
T Consensus 151 ll~~l~~ 157 (288)
T 3ijp_A 151 LLANLVK 157 (288)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 464
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=23.49 E-value=3.1e+02 Score=27.53 Aligned_cols=19 Identities=11% Similarity=0.078 Sum_probs=14.9
Q ss_pred HHHHHhcCCCCCEEEEecC
Q 007327 94 SSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~ 112 (608)
.++++|.+.+++.+|.+|+
T Consensus 127 ~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 127 NMIEAARINGIKRFFYASS 145 (379)
T ss_dssp HHHHHHHHTTCSEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEee
Confidence 5678888788988888775
No 465
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=23.33 E-value=1.1e+02 Score=30.01 Aligned_cols=22 Identities=18% Similarity=0.329 Sum_probs=15.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEe
Q 007327 210 LSDHILRFNNIPQVKMMVVLGE 231 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E 231 (608)
+.+.++.+.+||++++|++-.+
T Consensus 36 L~~al~~~~~d~~vr~vVltg~ 57 (275)
T 1dci_A 36 LVECFQKISKDSDCRAVVVSGA 57 (275)
T ss_dssp HHHHHHHHHTCTTCCEEEEEES
T ss_pred HHHHHHHHHhCCCceEEEEECC
Confidence 3456666677777777777765
No 466
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=23.22 E-value=70 Score=31.72 Aligned_cols=54 Identities=28% Similarity=0.373 Sum_probs=35.1
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc-----c-------------HH-------HHHHHHHhCC-CCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR-----D-------------EY-------SLVEALKQGK-VNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~-----~-------------~~-------~f~~~~r~a~-~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++..+ |-. | .. .+.+..++.. ..||||+..-|..-.
T Consensus 52 L~~al~~~~~d~~vr~vVltg~-G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 130 (279)
T 3t3w_A 52 LDAAWTRAAEDNDVSVIVLRAN-GKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCIS 130 (279)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC-SSCSBCCBCCC--------CCHHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSEEEG
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCceeeccChHhhhhcccccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEhH
Confidence 4577788888999999999888 510 1 01 1122223332 789999998887655
Q ss_pred C
Q 007327 264 L 264 (608)
Q Consensus 264 g 264 (608)
|
T Consensus 131 g 131 (279)
T 3t3w_A 131 G 131 (279)
T ss_dssp G
T ss_pred H
Confidence 4
No 467
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=23.13 E-value=1.4e+02 Score=28.54 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=27.4
Q ss_pred CCHHHHhhcCCCccEEEEeccCh-----hcHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFR-----SAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~-----~~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. ++|.+|-+.... .....++++|.+.|++.+|.+|+
T Consensus 57 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 57 AALTSALQ---GVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp HHHHHHTT---TCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHh---CCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 34555443 479887655421 12457788888889998888876
No 468
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=22.92 E-value=2.2e+02 Score=27.72 Aligned_cols=74 Identities=3% Similarity=-0.114 Sum_probs=44.1
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHH-HHHHHhhcCCCccEEEEEEecCCccHHHHHHHHH
Q 007327 167 PGSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLS-DHILRFNNIPQVKMMVVLGELGGRDEYSLVEALK 245 (608)
Q Consensus 167 ~G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~-d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r 245 (608)
..+|-++.-.+ -...+.+.++++|.-+..+.-.=... .-+.. ++.+.+.+.....+|+++ +-..-+.|++.+.
T Consensus 157 g~~vLi~rg~~-~r~~L~~~L~~~G~~v~~~~~Y~~~~--~~~~~~~~~~~l~~~~~~d~v~ft---S~~~v~~f~~~~~ 230 (286)
T 1jr2_A 157 ALPLLFPCGNL-KREILPKALKDKGIAMESITVYQTVA--HPGIQGNLNSYYSQQGVPASITFF---SPSGLTYSLKHIQ 230 (286)
T ss_dssp SSCEEEEESCG-GGCCHHHHHHTTTCCEEEEECEEEEE--CTTHHHHHHHHHHHHCSCSEEEES---SHHHHHHHHHHHH
T ss_pred CCeEEEECChh-hHHHHHHHHHHCCCeeEEEEEEEEee--CCCcHHHHHHHHHhCCCCCEEEEE---ChHHHHHHHHHHh
Confidence 34676553333 23346678888999887777664443 22333 444555543556677776 5555677887765
Q ss_pred h
Q 007327 246 Q 246 (608)
Q Consensus 246 ~ 246 (608)
+
T Consensus 231 ~ 231 (286)
T 1jr2_A 231 E 231 (286)
T ss_dssp H
T ss_pred h
Confidence 4
No 469
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=22.78 E-value=1.5e+02 Score=28.71 Aligned_cols=43 Identities=9% Similarity=-0.033 Sum_probs=26.9
Q ss_pred CCHHHHhhcCCCccEEEEeccCh---------hcHHHHHHHhcCCCCCEEEEecC
Q 007327 67 STVEAACAAHPMADVFINFSSFR---------SAAASSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 67 ~sv~~i~~~~p~vDlavi~vp~~---------~~~~~~le~~~~~gv~~~viis~ 112 (608)
.++.++.. ++|.+|.+.+.. .....++++|.+.|++.+|..|+
T Consensus 64 ~~l~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 64 VIMELALN---GAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp HHHHHHHT---TCSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHh---cCCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 34555444 479888765421 01346778888789988887554
No 470
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.76 E-value=2.3e+02 Score=22.36 Aligned_cols=77 Identities=9% Similarity=0.103 Sum_probs=47.0
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.-+-.....+...+.+.|. . +.... +..+.++.+.+. ...+|++-++....++-++++.+|+ .
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~--~-v~~~~-------~~~~a~~~~~~~-~~dlvl~D~~l~~~~g~~~~~~l~~-~ 70 (120)
T 2a9o_A 3 KILIVDDEKPISDIIKFNMTKEGY--E-VVTAF-------NGREALEQFEAE-QPDIIILDLMLPEIDGLEVAKTIRK-T 70 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--E-EEEES-------SHHHHHHHHHHH-CCSEEEECSSCSSSCHHHHHHHHHH-H
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCc--E-EEEec-------CHHHHHHHHHhC-CCCEEEEeccCCCCCHHHHHHHHHh-C
Confidence 366677676666666666665543 2 22222 345667776553 2456666555334578889998887 3
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 71 ~~~~ii~~s 79 (120)
T 2a9o_A 71 SSVPILMLS 79 (120)
T ss_dssp CCCCEEEEE
T ss_pred CCCCEEEEe
Confidence 567888873
No 471
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=22.64 E-value=67 Score=31.39 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=35.2
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCCc--------------cH---HH----HHHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGGR--------------DE---YS----LVEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~~--------------~~---~~----f~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++++|++-.+ +.+ +. .. +.+..++. ...||||+..-|..-.|
T Consensus 36 L~~al~~~~~d~~vr~vVltg~-~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 111 (260)
T 1sg4_A 36 LVISLEKLENDKSFRGVILTSD-RPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAG 111 (260)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-STEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHH
T ss_pred HHHHHHHHHhCCCceEEEEEcC-CCCceEcCcCHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehH
Confidence 4577788888999999999987 411 11 12 22233333 36899999987766543
No 472
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=22.63 E-value=80 Score=30.98 Aligned_cols=53 Identities=25% Similarity=0.305 Sum_probs=34.0
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHHHH-------------HHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSL-------------VEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~~f-------------~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++|+|++..+ |- .|-..| .+..++. ...||||+..-|..-.
T Consensus 42 l~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 113 (263)
T 3moy_A 42 VLDAARDFDADLEIGAIVVTGS-ERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALG 113 (263)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC-SSEEEESBCHHHHTTCCHHHHHHTTTTHHHHHHTTCCSCEEEEECBEEET
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCCeeCCcChHHHhccCchhHHHHHHHHHHHHHHhCCCCEEEEECCEeeh
Confidence 4577788888999999999766 31 121111 1123333 3789999998776654
No 473
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=22.41 E-value=1.3e+02 Score=29.51 Aligned_cols=24 Identities=29% Similarity=0.419 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCCCCEEEEEeCCCccC
Q 007327 239 SLVEALKQGKVNKPVVAWVSGTCARL 264 (608)
Q Consensus 239 ~f~~~~r~a~~~KPVvvlk~Grs~~g 264 (608)
+++..+++ ..||||+..-|..-.|
T Consensus 98 ~~~~~l~~--~~kPvIAav~G~a~Gg 121 (273)
T 2uzf_A 98 DLQRLIRI--IPKPVIAMVKGYAVGG 121 (273)
T ss_dssp HHHHHHHH--SSSCEEEEECEEEETH
T ss_pred HHHHHHHh--CCCCEEEEECCEEeeh
Confidence 33444443 6799999987765543
No 474
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.37 E-value=4.8e+02 Score=24.37 Aligned_cols=88 Identities=5% Similarity=-0.038 Sum_probs=47.4
Q ss_pred CCCcEEEEEcCCchHHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 8 SKTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 8 ~p~s~avv~g~~~~~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
+|+.|+.. +...+..|...|-. ..+-|+......- ..+..-...|-..-++++.+..- ++||++..-.
T Consensus 1 ~P~RIv~l---~~~~~e~l~aLG~~-----d~iVg~~~~~~~p--~~~~~~p~vg~~~~~n~E~i~~l--~PDlIi~~~~ 68 (255)
T 3md9_A 1 MAERIVTI---GGDVTEIAYALGAG-----DEIVARDSTSQQP--QAAQKLPDVGYMRTLNAEGILAM--KPTMLLVSEL 68 (255)
T ss_dssp -CCCEEEE---SHHHHHHHHHTTCG-----GGEEEECTTCCCS--GGGGGSCBCCCTTSCCHHHHHTT--CCSEEEEETT
T ss_pred CCceEEEC---CccHHHHHHHcCCC-----CcEEEecCCCCCc--HHHhcCCccCCCCCCCHHHHHcc--CCCEEEEcCC
Confidence 48888877 33456777777631 2344665221110 00111112233334688888764 4799876443
Q ss_pred ChhcHHHHHHHhcCCCCCEEEE
Q 007327 88 FRSAAASSMAALKQPTIRVVAI 109 (608)
Q Consensus 88 ~~~~~~~~le~~~~~gv~~~vi 109 (608)
.. .....+.+.+.|++.+++
T Consensus 69 ~~--~~~~~~~L~~~gipvv~~ 88 (255)
T 3md9_A 69 AQ--PSLVLTQIASSGVNVVTV 88 (255)
T ss_dssp CS--CHHHHHHHHHTTCEEEEE
T ss_pred cC--chhHHHHHHHcCCcEEEe
Confidence 21 235667777788887665
No 475
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=22.37 E-value=2.3e+02 Score=28.97 Aligned_cols=36 Identities=14% Similarity=-0.018 Sum_probs=24.7
Q ss_pred CccEEEEeccChhcHHHHHHHhcCCCCCEEEEecCCCC
Q 007327 78 MADVFINFSSFRSAAASSMAALKQPTIRVVAIIAEGVP 115 (608)
Q Consensus 78 ~vDlavi~vp~~~~~~~~le~~~~~gv~~~viis~Gf~ 115 (608)
++|+++-|+|....... .+...++|+|.++ +|+-|.
T Consensus 91 gvDiV~eatg~~~s~e~-a~~~l~~Gak~V~-iSap~r 126 (337)
T 1rm4_O 91 GIDLVIEGTGVFVDRDG-AGKHLQAGAKKVL-ITAPGK 126 (337)
T ss_dssp TCCEEEECSSSCCBHHH-HHHHHHTTCSEEE-ESSCCB
T ss_pred CCCEEEECCCchhhHHH-HHHHHHcCCEEEE-ECCccc
Confidence 38999999998654444 4445558999654 576664
No 476
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=22.36 E-value=54 Score=31.85 Aligned_cols=103 Identities=14% Similarity=0.016 Sum_probs=53.0
Q ss_pred cEEEEEcCC--ch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEecc
Q 007327 11 TQALFYNYK--QL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINFSS 87 (608)
Q Consensus 11 s~avv~g~~--~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~vp 87 (608)
+++|+ |.+ |+ +.+.+.+.|+ .|..++ +... +...+. +-.|.. +.++.++ . +.|++|+++|
T Consensus 118 ~v~ii-G~G~~g~~~a~~l~~~g~-------~v~v~~-r~~~-~~~~l~--~~~~~~-~~~~~~~-~---~~Divi~~tp 180 (263)
T 2d5c_A 118 PALVL-GAGGAGRAVAFALREAGL-------EVWVWN-RTPQ-RALALA--EEFGLR-AVPLEKA-R---EARLLVNATR 180 (263)
T ss_dssp CEEEE-CCSHHHHHHHHHHHHTTC-------CEEEEC-SSHH-HHHHHH--HHHTCE-ECCGGGG-G---GCSEEEECSS
T ss_pred eEEEE-CCcHHHHHHHHHHHHCCC-------EEEEEE-CCHH-HHHHHH--HHhccc-hhhHhhc-c---CCCEEEEccC
Confidence 67777 443 33 7778887753 355666 4221 000110 011223 5677775 4 4799999999
Q ss_pred ChhcH--HHHH-HHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 88 FRSAA--ASSM-AALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 88 ~~~~~--~~~l-e~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
..... ...+ ..+-+.|. +++.-++.... .++.+.+++.|.+++
T Consensus 181 ~~~~~~~~~~l~~~~l~~g~---~viD~~~~p~~-t~l~~~a~~~g~~~v 226 (263)
T 2d5c_A 181 VGLEDPSASPLPAELFPEEG---AAVDLVYRPLW-TRFLREAKAKGLKVQ 226 (263)
T ss_dssp TTTTCTTCCSSCGGGSCSSS---EEEESCCSSSS-CHHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCCCHHHcCCCC---EEEEeecCCcc-cHHHHHHHHCcCEEE
Confidence 87311 0111 12222332 23333332111 257888899999877
No 477
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=22.33 E-value=1.7e+02 Score=29.23 Aligned_cols=19 Identities=16% Similarity=0.177 Sum_probs=14.4
Q ss_pred HHHHHhcCCCCCEEEEecC
Q 007327 94 SSMAALKQPTIRVVAIIAE 112 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~ 112 (608)
.++++|.+.|++.+|.+|+
T Consensus 124 ~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 124 NVINACLKNAISQVIALST 142 (344)
T ss_dssp HHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHhCCCCEEEEecC
Confidence 4667777778888888776
No 478
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=22.28 E-value=1e+02 Score=31.52 Aligned_cols=106 Identities=13% Similarity=0.010 Sum_probs=61.6
Q ss_pred CCCcEEEEE-cCCch-HHHHHhhCcccCCCCCCcEEEEeCCCCCCccccccCceeecccccCCHHHHhhcCCCccEEEEe
Q 007327 8 SKTTQALFY-NYKQL-PIQRMLDFDFLCGRETPSVAGIINPGAEGFQKLFFGQEEIAIPVHSTVEAACAAHPMADVFINF 85 (608)
Q Consensus 8 ~p~s~avv~-g~~~~-~~~~l~~~~~~~~~g~~~v~~v~~p~~~~~~~~~~g~ev~G~~~y~sv~~i~~~~p~vDlavi~ 85 (608)
+-+++.||| |.-|+ +.+.+..+|+. |.+.+ |..... ..-.|. .|.+++++... .|.+++.
T Consensus 140 ~g~tvGIiG~G~IG~~va~~~~~fg~~-------v~~~d-~~~~~~------~~~~~~-~~~~l~ell~~---sDivslh 201 (334)
T 3kb6_A 140 NRLTLGVIGTGRIGSRVAMYGLAFGMK-------VLCYD-VVKRED------LKEKGC-VYTSLDELLKE---SDVISLH 201 (334)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCE-------EEEEC-SSCCHH------HHHTTC-EECCHHHHHHH---CSEEEEC
T ss_pred cCcEEEEECcchHHHHHHHhhcccCce-------eeecC-Cccchh------hhhcCc-eecCHHHHHhh---CCEEEEc
Confidence 445788885 32244 77777777643 45666 522200 011222 46799999874 6999999
Q ss_pred ccChhcH-----HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEE
Q 007327 86 SSFRSAA-----ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 86 vp~~~~~-----~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvl 134 (608)
+|-.... ...++.+. -.+++|-++-=+--+++.|.+..++..+.=.
T Consensus 202 ~Plt~~T~~li~~~~l~~mk---~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA 252 (334)
T 3kb6_A 202 VPYTKETHHMINEERISLMK---DGVYLINTARGKVVDTDALYRAYQRGKFSGL 252 (334)
T ss_dssp CCCCTTTTTCBCHHHHHHSC---TTEEEEECSCGGGBCHHHHHHHHHTTCEEEE
T ss_pred CCCChhhccCcCHHHHhhcC---CCeEEEecCccccccHHHHHHHHHhCCceEE
Confidence 9974322 34555554 3445555543222378889888887665533
No 479
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=22.11 E-value=5.1e+02 Score=25.81 Aligned_cols=20 Identities=20% Similarity=0.129 Sum_probs=14.3
Q ss_pred HHHHHHhcCC-CCCEEEEecC
Q 007327 93 ASSMAALKQP-TIRVVAIIAE 112 (608)
Q Consensus 93 ~~~le~~~~~-gv~~~viis~ 112 (608)
..++++|.+. +++.+|.+|+
T Consensus 131 ~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 131 LKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HHHHHHHTTCSSCCEEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEeCC
Confidence 3567778777 7877777765
No 480
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=22.05 E-value=1.5e+02 Score=29.50 Aligned_cols=54 Identities=9% Similarity=0.091 Sum_probs=33.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----c-cHHH------------------HHHHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----R-DEYS------------------LVEALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~-~~~~------------------f~~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- . |-.. +.+..++. ...||||+..-|..-.|
T Consensus 39 L~~al~~~~~d~~vr~vVltg~-G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~Gg 117 (289)
T 3h0u_A 39 LVALLEELAHPTAPRVVIFDSA-DADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGA 117 (289)
T ss_dssp HHHHHHHTTSTTSCSEEEEEEC-SSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHTCSSEEEEEECSEEETH
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehh
Confidence 4566777778888888888877 41 1 2111 12222222 36899999988776543
No 481
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=22.00 E-value=3.6e+02 Score=27.41 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=16.6
Q ss_pred CCHHHHHHHHHHHHhCCCeEE
Q 007327 114 VPEADTKQLIAYARSNNKVVI 134 (608)
Q Consensus 114 f~e~~~~~l~~~a~~~g~rvl 134 (608)
++....++|.++|+++|+.++
T Consensus 208 ~~~~~l~~l~~~~~~~~~~li 228 (435)
T 3piu_A 208 MTRNELYLLLSFVEDKGIHLI 228 (435)
T ss_dssp CCHHHHHHHHHHHHHHTCEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEE
Confidence 344567899999999998766
No 482
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=21.89 E-value=96 Score=29.28 Aligned_cols=49 Identities=20% Similarity=0.211 Sum_probs=35.6
Q ss_pred HHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCccccc
Q 007327 93 ASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATVGGI 142 (608)
Q Consensus 93 ~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~ 142 (608)
+++.+++...|.+.+-|+| -+.....+...+..+++|+.++.|++.|+.
T Consensus 97 ~a~~~a~~~~g~~rvgvlt-~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 145 (223)
T 2dgd_A 97 ESVYELLKKLNVRKLWIGT-PYIKERTLEEVEWWRNKGFEIVGYDGLGKI 145 (223)
T ss_dssp HHHHHHHHHTTCCEEEEEE-SSCHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred HHHHHHHHHcCCCeEEEEe-CCchHHHHHHHHHHHhCCcEEecccCCCCC
Confidence 5556666657778888876 455555667777778889999999887754
No 483
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=21.76 E-value=3.1e+02 Score=26.84 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHHHhCCCeEEcCCcccccccCcccccccCCcccccccccCCCCCcEEEEecC--hh----HHHHHHH
Q 007327 112 EGVPEADTKQLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKS--GG----MSNELYN 185 (608)
Q Consensus 112 ~Gf~e~~~~~l~~~a~~~g~rvlGPNc~Gi~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQS--G~----l~~~~~~ 185 (608)
.++++...+++.+.+++.|-+ ||...- .|. .-+...||++... .. +...+-+
T Consensus 25 ~~vs~~tr~rV~~~a~~lgY~---pn~~ar------~l~-------------~~~~~~Igvi~~~~~~~~~~~~~~gi~~ 82 (340)
T 1qpz_A 25 RFVAEETRNAVWAAIKELHYS---PSAVAR------SLK-------------VNHTKSIGLLATSSEAAYFAEIIEAVEK 82 (340)
T ss_dssp SCCCHHHHHHHHHHHHHHTCC---CCHHHH------HHH-------------HTCCSEEEEEESCSCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCC---CCHHHH------hhc-------------cCCCCEEEEEeCCCCChHHHHHHHHHHH
Confidence 367888899999999998755 553210 110 0133456666432 22 3333445
Q ss_pred HHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEE
Q 007327 186 TIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAW 256 (608)
Q Consensus 186 ~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvl 256 (608)
.+.+.|.-+..+ .+.++. -...++++.+.+ ..+..|++.. ........+.+++ ..+.|||++
T Consensus 83 ~a~~~g~~~~~~-~~~~~~---~~~~~~~~~l~~-~~vdgiI~~~---~~~~~~~~~~l~~-~~~iPvV~~ 144 (340)
T 1qpz_A 83 NCFQKGYTLILG-NAWNNL---EKQRAYLSMMAQ-KRVDGLLVMC---SEYPEPLLAMLEE-YRHIPMVVM 144 (340)
T ss_dssp HHHHTTCEEEEE-ECTTCH---HHHHHHHHHHHH-TTCSEEEECC---SCCCHHHHHHHHT-TTTSCEEEE
T ss_pred HHHHcCCEEEEE-eCCCCH---HHHHHHHHHHHc-CCCCEEEEeC---CCCChHHHHHHHh-hCCCCEEEE
Confidence 555666544332 222221 123456666654 4577877763 2222234455543 257899987
No 484
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=21.71 E-value=6.2e+02 Score=25.40 Aligned_cols=144 Identities=4% Similarity=-0.064 Sum_probs=81.6
Q ss_pred HHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcc--cccccCc----ccccccCCcccc---ccc-
Q 007327 92 AASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATV--GGIQAGA----FKIGDTAGTIDN---IIH- 161 (608)
Q Consensus 92 ~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~--Gi~~~~~----~~l~~~~~~~~~---~~p- 161 (608)
+..+++.+.+.+|.++| ++..-.....+..++.+.++.+|.|.+- .+-+... +++ ..+... .+-
T Consensus 66 ~~~a~~~l~~~~v~avi---G~~~S~~~~av~~~~~~~~ip~is~~~~~~~ls~~~~~~~~fr~---~p~~~~~~~a~~~ 139 (435)
T 1dp4_A 66 PLAAVDLKWEHSPAVFL---GPGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRT---GPSHVKLGDFVTA 139 (435)
T ss_dssp HHHHHHHHHHHCCSEEE---CCCSHHHHHHHHHHHHHHTCCEEESCCCCGGGGCTTTSTTEEEC---SCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCceEEE---CCCChHHHHHHHHHHHhcCCcEEcccccccccCcccccCeEEEe---cCcHHHHHHHHHH
Confidence 44555655545675433 2333345566778888999999988763 3322211 111 000000 000
Q ss_pred -ccCCCCCcEEEE------ecChhHH---HHHHHHHHh-cCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEE
Q 007327 162 -CKLYRPGSVGFV------SKSGGMS---NELYNTIAR-VTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLG 230 (608)
Q Consensus 162 -~~~~~~G~valv------SQSG~l~---~~~~~~~~~-~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~ 230 (608)
...+.--.|++| .+....+ ..+...+.+ .|+-+....... .. +.++...+.-+.+ ..++|+++.
T Consensus 140 ~l~~~~w~~v~ii~~~d~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~-~~--~~d~~~~l~~i~~--~~~viv~~~ 214 (435)
T 1dp4_A 140 LHRRLGWEHQALVLYADRLGDDRPCFFIVEGLYMRVRERLNITVNHQEFVE-GD--PDHYPKLLRAVRR--KGRVIYICS 214 (435)
T ss_dssp HHHHHTCCSEEEEEEECCSSSCCHHHHHHHHHHHHHHHHHCCEEEEEEECT-TC--GGGHHHHHHHHHH--HCSEEEEES
T ss_pred HHHHCCCcEEEEEEEccCCCCcchHHHHHHHHHHHHHhhcCeEEEEEEEec-Cc--hhhHHHHHHHHHh--hCceEEEec
Confidence 001234579999 7655444 234445555 787666554442 12 4567888888877 678999986
Q ss_pred ecCCccHHHHHHHHHhCC
Q 007327 231 ELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 231 E~g~~~~~~f~~~~r~a~ 248 (608)
. ..+...|++.+++..
T Consensus 215 ~--~~~~~~~~~~a~~~g 230 (435)
T 1dp4_A 215 S--PDAFRNLMLLALNAG 230 (435)
T ss_dssp C--HHHHHHHHHHHHHTT
T ss_pred C--hHHHHHHHHHHHHcC
Confidence 5 345677888888864
No 485
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=21.57 E-value=3.2e+02 Score=25.90 Aligned_cols=173 Identities=6% Similarity=-0.012 Sum_probs=78.8
Q ss_pred cCCHHHHhhcCCCccEEEEeccCh-hcHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCc--c--c
Q 007327 66 HSTVEAACAAHPMADVFINFSSFR-SAAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPAT--V--G 140 (608)
Q Consensus 66 y~sv~~i~~~~p~vDlavi~vp~~-~~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc--~--G 140 (608)
...+++...+. ..++.+...... ......++.+.+.++.++|+.+....+ ..+.+.+++.|+.++--|. - +
T Consensus 39 ~~gi~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~---~~~~~~~~~~~iPvV~~~~~~~~~~ 114 (293)
T 2iks_A 39 ANYLERQARQR-GYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPE---HPFYQRWANDPFPIVALDRALDREH 114 (293)
T ss_dssp HHHHHHHHHHT-TCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTT---CHHHHTTTTSSSCEEEEESCCCTTT
T ss_pred HHHHHHHHHHC-CCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc---HHHHHHHHhCCCCEEEECCccCcCC
Confidence 33444444444 367765433221 112345677767899998887643322 2244455667876542221 1 1
Q ss_pred c--cccCcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeEEeecCCCCCCCCCHHH
Q 007327 141 G--IQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYEGIAIGGDVFPGSTLSD 212 (608)
Q Consensus 141 i--~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d 212 (608)
+ +..+....+ -.....+- ....++|++++-+... .....+.+++.|+-... +-.|+... +-....
T Consensus 115 ~~~V~~d~~~~~---~~a~~~L~--~~G~~~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~~~~~-~~~~~~~~-~~~~~~ 187 (293)
T 2iks_A 115 FTSVVGADQDDA---EMLAEELR--KFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHF-LYANSYER-EAAAQL 187 (293)
T ss_dssp CEEEEECHHHHH---HHHHHHHH--TSCCSSEEEEEECTTSHHHHHHHHHHHHHHTTCCCCEEE-EEESSSCH-HHHHHH
T ss_pred CCEEEecCHHHH---HHHHHHHH--HCCCCEEEEEecCcccccHHHHHHHHHHHHHHcCCCccE-EEcCCCCh-hhHHHH
Confidence 0 111110000 00000000 1245689999754221 11234455666763322 32333210 111223
Q ss_pred HHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 213 HILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 213 ~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
+-++|...|+..+|...-. .-...+++++++...+.|
T Consensus 188 ~~~~l~~~~~~~ai~~~~d---~~a~g~~~al~~~g~~vP 224 (293)
T 2iks_A 188 FEKWLETHPMPQALFTTSF---ALLQGVMDVTLRRDGKLP 224 (293)
T ss_dssp HHHHTTTSCCCSEEEESSH---HHHHHHHHHHHHHHSSCC
T ss_pred HHHHHhcCCCCCEEEECCh---HHHHHHHHHHHHcCCCCC
Confidence 3455666677777765422 223456778777544434
No 486
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=21.56 E-value=3.4e+02 Score=22.26 Aligned_cols=112 Identities=12% Similarity=0.114 Sum_probs=65.9
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|.-.-.....+...+.. + +. +... -+..+.++++.+.+ ..+|++=+.....+|-++++.+++..
T Consensus 3 ~Ilivdd~~~~~~~l~~~l~~-~--~~-v~~~-------~~~~~a~~~~~~~~-~dlvl~D~~lp~~~g~~~~~~l~~~~ 70 (139)
T 2jk1_A 3 AILLVDDEPHSLAAMKLALED-D--FD-VLTA-------QGAEAAIAILEEEW-VQVIICDQRMPGRTGVDFLTEVRERW 70 (139)
T ss_dssp EEEEECSSHHHHHHHHHHHTT-T--SC-EEEE-------SSHHHHHHHHHHSC-EEEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred eEEEEcCCHHHHHHHHHHhhc-C--ce-EEEc-------CCHHHHHHHHhcCC-CCEEEEeCCCCCCcHHHHHHHHHHhC
Confidence 456666666555555555543 2 22 2222 23467788776643 56776666533457889999998755
Q ss_pred CCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHHHHHHHHcCC----cccCCHHHHHHHHHHHHH
Q 007327 249 VNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALRDAGA----VVPTSYEAFESAIKETFE 315 (608)
Q Consensus 249 ~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~~a~~~qaGv----i~v~~~~el~~~~~~~~~ 315 (608)
...|||++- +... . .....+++..|+ ...-+.++|...++.+..
T Consensus 71 ~~~~ii~~s-~~~~------------------~----~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIIT-GYTD------------------S----ASMMAAINDAGIHQFLTKPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEE-SCTT------------------C----HHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEe-CCCC------------------h----HHHHHHHHhhchhhhccCCCCHHHHHHHHHHHHH
Confidence 566887762 2211 1 334455565553 234578888888876654
No 487
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=21.51 E-value=88 Score=30.54 Aligned_cols=54 Identities=20% Similarity=0.329 Sum_probs=34.4
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC--c---cHHHHHHH----------HHhCCCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG--R---DEYSLVEA----------LKQGKVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~--~---~~~~f~~~----------~r~a~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++|+|++-.+ |- . |-..|.+. ..+....||||+..-|..-.|
T Consensus 39 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~kPvIAav~G~a~Gg 107 (256)
T 3trr_A 39 LAAAADQLDSSADLSVAIITGA-GGNFCAGMDLKAFVSGEAVLSERGLGFTNVPPRKPIIAAVEGFALAG 107 (256)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEG-GGCCCCCBCHHHHHHTCCCEETTEETTSSSCCSSCEEEEECSBCCTH
T ss_pred HHHHHHHHhcCCCeEEEEEECC-CCceecCcCHHHhccccchhhhhhhhHHHhcCCCCEEEEECCeeeec
Confidence 4567777888888888888877 41 1 33333220 112246899999988876643
No 488
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=21.42 E-value=5.1e+02 Score=24.32 Aligned_cols=170 Identities=6% Similarity=-0.002 Sum_probs=81.0
Q ss_pred ccCCHHHHhhcCCCccEEEEeccChh-cHHHHHHHhcCCCCCEEEEecCCCCHHHHHHHHHHHHhCCCeEEcCCcc--c-
Q 007327 65 VHSTVEAACAAHPMADVFINFSSFRS-AAASSMAALKQPTIRVVAIIAEGVPEADTKQLIAYARSNNKVVIGPATV--G- 140 (608)
Q Consensus 65 ~y~sv~~i~~~~p~vDlavi~vp~~~-~~~~~le~~~~~gv~~~viis~Gf~e~~~~~l~~~a~~~g~rvlGPNc~--G- 140 (608)
....+++...+. ..++.+....... .....++.+.+.++.++|+.+....+ +..+.++ .|+.++--|+. +
T Consensus 26 ~~~gi~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~----~~~~~l~-~~iPvV~~~~~~~~~ 99 (285)
T 3c3k_A 26 VVKGIEKTAEKN-GYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSEL----PELQNII-GAFPWVQCAEYDPLS 99 (285)
T ss_dssp HHHHHHHHHHHT-TCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGGH----HHHHHHH-TTSSEEEESSCCTTS
T ss_pred HHHHHHHHHHHc-CCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCCh----HHHHHHh-cCCCEEEEccccCCC
Confidence 334445444444 2676554332211 12345677777899998887644432 2233345 78775543321 1
Q ss_pred ---ccccCcccccccCCcccccccccCCCCCcEEEEecChhH------HHHHHHHHHhcCCceeEEeecCCCCCCCCCHH
Q 007327 141 ---GIQAGAFKIGDTAGTIDNIIHCKLYRPGSVGFVSKSGGM------SNELYNTIARVTDGIYEGIAIGGDVFPGSTLS 211 (608)
Q Consensus 141 ---i~~~~~~~l~~~~~~~~~~~p~~~~~~G~valvSQSG~l------~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~ 211 (608)
.+..+....+ -.....+- ....++|++++..... ...+.+.+++.|+-+. ++. |+.. .-+..
T Consensus 100 ~~~~V~~D~~~~g---~~a~~~L~--~~G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~-~~~-~~~~--~~~~~ 170 (285)
T 3c3k_A 100 TVSSVSIDDVAAS---EYVVDQLV--KSGKKRIALINHDLAYQYAQHRESGYLNRLKFHGLDYS-RIS-YAEN--LDYMA 170 (285)
T ss_dssp SSCEEECCHHHHH---HHHHHHHH--HTTCCCEEEEECCTTSHHHHHHHHHHHHHHHHHTCCCC-EEE-ECSS--SSHHH
T ss_pred CCCEEEEChHHHH---HHHHHHHH--HcCCCeEEEEeCCCccccHHHHHHHHHHHHHHcCCCce-Eee-cCCC--hHHHH
Confidence 1111110000 00000000 1245789999865321 1223455666777665 332 3322 12223
Q ss_pred HHH-H--HhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCC
Q 007327 212 DHI-L--RFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKP 252 (608)
Q Consensus 212 d~l-~--~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KP 252 (608)
+.+ + +|...|+..+|... +-.....+++++++...+.|
T Consensus 171 ~~~~~~~~l~~~~~~~ai~~~---~d~~A~g~~~al~~~g~~vP 211 (285)
T 3c3k_A 171 GKLATFSLLKSAVKPDAIFAI---SDVLAAGAIQALTESGLSIP 211 (285)
T ss_dssp HHHHHHHHHSSSSCCSEEEES---SHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHcCCCCCeEEEEC---CHHHHHHHHHHHHHcCCCCC
Confidence 333 4 56666777777654 22224567888888655444
No 489
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=21.39 E-value=3.3e+02 Score=26.22 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=15.7
Q ss_pred HHHHHhcCCCCCEEEEecCC
Q 007327 94 SSMAALKQPTIRVVAIIAEG 113 (608)
Q Consensus 94 ~~le~~~~~gv~~~viis~G 113 (608)
.++++|.+.|++.+|.+|+.
T Consensus 99 ~l~~a~~~~~~~~iv~~SS~ 118 (311)
T 2p5y_A 99 NLLEACRQYGVEKLVFASTG 118 (311)
T ss_dssp HHHHHHHHTTCSEEEEEEEH
T ss_pred HHHHHHHHhCCCEEEEeCCC
Confidence 56788887899888888763
No 490
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.28 E-value=1.3e+02 Score=30.52 Aligned_cols=89 Identities=16% Similarity=0.224 Sum_probs=46.1
Q ss_pred cCCCCC-cEEEEecChhHHH-------HHHHHHHhcCCceeEEeecCCC--CCCC---CCHHHHHHHhhcCCCccEEEEE
Q 007327 163 KLYRPG-SVGFVSKSGGMSN-------ELYNTIARVTDGIYEGIAIGGD--VFPG---STLSDHILRFNNIPQVKMMVVL 229 (608)
Q Consensus 163 ~~~~~G-~valvSQSG~l~~-------~~~~~~~~~g~G~s~~vs~Gn~--~~~d---v~~~d~l~~l~~Dp~T~~I~ly 229 (608)
.+++|| .|++||=|+++.. ....++++.|+-+...=.+... -+.+ .-..|+.+.| .||++|+|+.-
T Consensus 7 ~~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~-~Dp~i~aI~~~ 85 (327)
T 4h1h_A 7 AKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAF-NDSSVKAILTV 85 (327)
T ss_dssp CCCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHH-HCTTEEEEEES
T ss_pred CCCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHh-hCCCCCEEEEc
Confidence 456788 5999999976531 1234555545433221112111 1112 2345665554 68999999776
Q ss_pred EecCCccHHHHH-----HHHHhCCCCCCEEEE
Q 007327 230 GELGGRDEYSLV-----EALKQGKVNKPVVAW 256 (608)
Q Consensus 230 ~E~g~~~~~~f~-----~~~r~a~~~KPVvvl 256 (608)
. |.-.--+.+ +.+++ ..|+++=|
T Consensus 86 r--GG~g~~rlL~~LD~~~i~~--~PK~~~Gy 113 (327)
T 4h1h_A 86 I--GGFNSNQLLPYLDYDLISE--NPKILCGF 113 (327)
T ss_dssp C--CCSCGGGGGGGCCHHHHHH--SCCEEEEC
T ss_pred C--CchhHHHHhhhcchhhhcc--CCeEEEec
Confidence 3 333333332 34444 45766644
No 491
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.19 E-value=4.5e+02 Score=23.58 Aligned_cols=78 Identities=12% Similarity=0.144 Sum_probs=51.3
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|...-.+...+...+.+.|+-+ ... .+..+.++.+.+. ...+|++-+.....++-++++.+|+..
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~~v---~~~-------~~~~~a~~~~~~~-~~dlvllD~~l~~~~g~~~~~~lr~~~ 72 (225)
T 1kgs_A 4 RVLVVEDERDLADLITEALKKEMFTV---DVC-------YDGEEGMYMALNE-PFDVVILDIMLPVHDGWEILKSMRESG 72 (225)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCEE---EEE-------SSHHHHHHHHHHS-CCSEEEEESCCSSSCHHHHHHHHHHTT
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCCEE---EEE-------CCHHHHHHHHhcC-CCCEEEEeCCCCCCCHHHHHHHHHhcC
Confidence 46677777777777777776654432 222 2345677777654 346777766634457889999999866
Q ss_pred CCCCEEEEE
Q 007327 249 VNKPVVAWV 257 (608)
Q Consensus 249 ~~KPVvvlk 257 (608)
...|||++-
T Consensus 73 ~~~~ii~ls 81 (225)
T 1kgs_A 73 VNTPVLMLT 81 (225)
T ss_dssp CCCCEEEEE
T ss_pred CCCCEEEEe
Confidence 678998883
No 492
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.10 E-value=5.5e+02 Score=24.57 Aligned_cols=89 Identities=6% Similarity=0.037 Sum_probs=54.4
Q ss_pred CCCcEEEEec-ChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHH
Q 007327 166 RPGSVGFVSK-SGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEAL 244 (608)
Q Consensus 166 ~~G~valvSQ-SG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~ 244 (608)
-.|++++|+- ||++|.++...+.++|. +++-++... .-...+..+.+.+....++..+..+ +.|++...+++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~---~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~D--v~d~~~v~~~~ 95 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGA---NIVLNGFGA--PDEIRTVTDEVAGLSSGTVLHHPAD--MTKPSEIADMM 95 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC---EEEEECCCC--HHHHHHHHHHHHTTCSSCEEEECCC--TTCHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC---EEEEEeCCC--hHHHHHHHHHHhhccCCcEEEEeCC--CCCHHHHHHHH
Confidence 3577888775 78899999999998885 455555422 2234455555655555666655555 77776665555
Q ss_pred HhCC---CCCCEEEEEeCCC
Q 007327 245 KQGK---VNKPVVAWVSGTC 261 (608)
Q Consensus 245 r~a~---~~KPVvvlk~Grs 261 (608)
++.. -+.=+++.-+|..
T Consensus 96 ~~~~~~~g~iD~lv~nAg~~ 115 (281)
T 3v2h_A 96 AMVADRFGGADILVNNAGVQ 115 (281)
T ss_dssp HHHHHHTSSCSEEEECCCCC
T ss_pred HHHHHHCCCCCEEEECCCCC
Confidence 4432 2334666655543
No 493
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=21.09 E-value=33 Score=33.74 Aligned_cols=53 Identities=25% Similarity=0.368 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHHH-------------HHHHHHhC-CCCCCEEEEEeCCCcc
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYS-------------LVEALKQG-KVNKPVVAWVSGTCAR 263 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~~-------------f~~~~r~a-~~~KPVvvlk~Grs~~ 263 (608)
+.+.++.+.+||++++|++..+ |- .|-.. |.+...+. ...||||+..-|..-.
T Consensus 39 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~G 110 (260)
T 1mj3_A 39 LNQALETFEEDPAVGAIVLTGG-EKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALG 110 (260)
T ss_dssp HHHHHHHHHHCTTCCEEEEECC-SSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSEEET
T ss_pred HHHHHHHHHhCCCeeEEEEECC-CCCccCCcChHhhhcccchHHHHHHHHHHHHHHHhCCCCEEEEECCEEEe
Confidence 3466777778888888888876 41 12111 11112222 2689999998776554
No 494
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=21.05 E-value=1.3e+02 Score=29.27 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCCccEEEEEEecCC-----ccHHHH----------H---HHHHhC-CCCCCEEEEEeCCCccC
Q 007327 210 LSDHILRFNNIPQVKMMVVLGELGG-----RDEYSL----------V---EALKQG-KVNKPVVAWVSGTCARL 264 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E~g~-----~~~~~f----------~---~~~r~a-~~~KPVvvlk~Grs~~g 264 (608)
+.+.++.+.+||++++|++-.+ |- .|-..| . +..++. ...||||+..-|..-.|
T Consensus 37 L~~al~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~Gg 109 (258)
T 2pbp_A 37 IVAAVEAFDRNEKVRVIVLTGR-GRAFAAGADIQEMAKDDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGG 109 (258)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES-TTEEECCCCHHHHHTCCHHHHHHHCTTHHHHHHHTCCSCEEEEECSEEETH
T ss_pred HHHHHHHHhhCCCceEEEEECC-CCCccCCcCHHHHhcccchhHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhH
Confidence 3466677777888888888765 31 111111 0 222232 37899999987765543
No 495
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.85 E-value=3.3e+02 Score=21.88 Aligned_cols=77 Identities=12% Similarity=0.136 Sum_probs=50.7
Q ss_pred cEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCC
Q 007327 169 SVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGK 248 (608)
Q Consensus 169 ~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~ 248 (608)
+|-+|--+......+...+.+.|. .. +.. .+..+.++++.+. ...+|++-+.....+|-++++.+|+..
T Consensus 4 ~ILivdd~~~~~~~l~~~l~~~g~--~v-~~~-------~~~~~al~~l~~~-~~dlvllD~~~p~~~g~~~~~~l~~~~ 72 (122)
T 3gl9_A 4 KVLLVDDSAVLRKIVSFNLKKEGY--EV-IEA-------ENGQIALEKLSEF-TPDLIVLXIMMPVMDGFTVLKKLQEKE 72 (122)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC--EE-EEE-------SSHHHHHHHHTTB-CCSEEEECSCCSSSCHHHHHHHHHTST
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCc--EE-EEe-------CCHHHHHHHHHhc-CCCEEEEeccCCCCcHHHHHHHHHhcc
Confidence 567777777776666666766554 32 222 2345778887653 346777766644567999999998753
Q ss_pred --CCCCEEEE
Q 007327 249 --VNKPVVAW 256 (608)
Q Consensus 249 --~~KPVvvl 256 (608)
...|||++
T Consensus 73 ~~~~~pii~~ 82 (122)
T 3gl9_A 73 EWKRIPVIVL 82 (122)
T ss_dssp TTTTSCEEEE
T ss_pred cccCCCEEEE
Confidence 46788887
No 496
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=20.85 E-value=1.5e+02 Score=25.98 Aligned_cols=29 Identities=10% Similarity=0.030 Sum_probs=23.5
Q ss_pred CCCCcEEEEecC---hhHHHHHHHHHHhcCCc
Q 007327 165 YRPGSVGFVSKS---GGMSNELYNTIARVTDG 193 (608)
Q Consensus 165 ~~~G~valvSQS---G~l~~~~~~~~~~~g~G 193 (608)
..|-+|++|.-| |.++..++.++.+.|.-
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~ 43 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFE 43 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCE
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE
Confidence 367789999988 89999999999887764
No 497
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=20.76 E-value=3.4e+02 Score=27.18 Aligned_cols=67 Identities=21% Similarity=0.126 Sum_probs=39.5
Q ss_pred CHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhCCCCCCEEEEEeCCCccCcccccccCCCCCcCCCCcchHHHH
Q 007327 209 TLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAK 288 (608)
Q Consensus 209 ~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a~~~KPVvvlk~Grs~~g~~~~aa~sHtgalag~~~~~a~~~ 288 (608)
|+.|++ +||+..+|.+... .-...+-..++++ .+|+|++=||-.... ..++..
T Consensus 58 ~~~~ll----~~~~vD~V~i~tp-~~~H~~~~~~al~---aGkhV~~EKPla~~~-------------------~e~~~l 110 (352)
T 3kux_A 58 DPQMLF----NDPSIDLIVIPTP-NDTHFPLAQSALA---AGKHVVVDKPFTVTL-------------------SQANAL 110 (352)
T ss_dssp CHHHHH----HCSSCCEEEECSC-TTTHHHHHHHHHH---TTCEEEECSSCCSCH-------------------HHHHHH
T ss_pred CHHHHh----cCCCCCEEEEeCC-hHHHHHHHHHHHH---CCCcEEEECCCcCCH-------------------HHHHHH
Confidence 455544 6788999887755 3333333333333 589999988632221 112455
Q ss_pred HHHHHHcCCcccCC
Q 007327 289 NQALRDAGAVVPTS 302 (608)
Q Consensus 289 ~a~~~qaGvi~v~~ 302 (608)
.++.++.|+...-.
T Consensus 111 ~~~a~~~g~~~~v~ 124 (352)
T 3kux_A 111 KEHADDAGLLLSVF 124 (352)
T ss_dssp HHHHHHTTCCEEEC
T ss_pred HHHHHHcCCeEEEE
Confidence 56778888865433
No 498
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=20.71 E-value=90 Score=31.81 Aligned_cols=22 Identities=32% Similarity=0.437 Sum_probs=16.9
Q ss_pred HHHHHHHhhcCCCccEEEEEEe
Q 007327 210 LSDHILRFNNIPQVKMMVVLGE 231 (608)
Q Consensus 210 ~~d~l~~l~~Dp~T~~I~ly~E 231 (608)
+.+.++.+.+||++|+|++-.+
T Consensus 67 L~~al~~~~~d~~vrvvVltG~ 88 (333)
T 3njd_A 67 LSALVERADLDPDVHVILVSGR 88 (333)
T ss_dssp HHHHHHHHHHCTTCCEEEEEES
T ss_pred HHHHHHHHhhCCCcEEEEEECC
Confidence 4567777778888888888776
No 499
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=20.60 E-value=2.4e+02 Score=22.75 Aligned_cols=79 Identities=11% Similarity=0.073 Sum_probs=50.8
Q ss_pred CcEEEEecChhHHHHHHHHHHhcCCceeEEeecCCCCCCCCCHHHHHHHhhcCCCccEEEEEEecCCccHHHHHHHHHhC
Q 007327 168 GSVGFVSKSGGMSNELYNTIARVTDGIYEGIAIGGDVFPGSTLSDHILRFNNIPQVKMMVVLGELGGRDEYSLVEALKQG 247 (608)
Q Consensus 168 G~valvSQSG~l~~~~~~~~~~~g~G~s~~vs~Gn~~~~dv~~~d~l~~l~~Dp~T~~I~ly~E~g~~~~~~f~~~~r~a 247 (608)
-+|-+|..+-.....+...+.+. |+..+.. --+..+.++++.+.+ ..+|++-++....++.++++.+|+.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~--g~~~v~~-------~~~~~~a~~~~~~~~-~dlvl~D~~l~~~~g~~~~~~l~~~ 76 (129)
T 1p6q_A 7 IKVLIVDDQVTSRLLLGDALQQL--GFKQITA-------AGDGEQGMKIMAQNP-HHLVISDFNMPKMDGLGLLQAVRAN 76 (129)
T ss_dssp CCEEEECSSHHHHHHHHHHHHTT--TCSCEEC-------CSSHHHHHHHHHTSC-CSEEEECSSSCSSCHHHHHHHHTTC
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC--CCcEEEe-------cCCHHHHHHHHHcCC-CCEEEEeCCCCCCCHHHHHHHHhcC
Confidence 36888888887777777777654 4422222 224567788776643 5677666553345788899988875
Q ss_pred C--CCCCEEEE
Q 007327 248 K--VNKPVVAW 256 (608)
Q Consensus 248 ~--~~KPVvvl 256 (608)
. ...|||++
T Consensus 77 ~~~~~~~ii~~ 87 (129)
T 1p6q_A 77 PATKKAAFIIL 87 (129)
T ss_dssp TTSTTCEEEEC
T ss_pred ccccCCCEEEE
Confidence 2 45677776
No 500
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=20.60 E-value=1.5e+02 Score=27.01 Aligned_cols=21 Identities=5% Similarity=-0.140 Sum_probs=13.7
Q ss_pred cEEEEEcCCch----HHHHHhhCccc
Q 007327 11 TQALFYNYKQL----PIQRMLDFDFL 32 (608)
Q Consensus 11 s~avv~g~~~~----~~~~l~~~~~~ 32 (608)
++.|. |++|. +++.|++.|+.
T Consensus 2 kilVt-GatG~iG~~l~~~L~~~g~~ 26 (224)
T 3h2s_A 2 KIAVL-GATGRAGSAIVAEARRRGHE 26 (224)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCE
T ss_pred EEEEE-cCCCHHHHHHHHHHHHCCCE
Confidence 45556 55444 88888888753
Done!